Query psy15389
Match_columns 864
No_of_seqs 379 out of 2443
Neff 7.2
Searched_HMMs 46136
Date Fri Aug 16 19:43:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15389.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15389hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG5023 Tubulin [Cytoskeleton] 100.0 2E-124 4E-129 982.1 35.8 437 1-446 2-438 (443)
2 COG5023 Tubulin [Cytoskeleton] 100.0 2E-114 3E-119 907.4 27.1 361 493-855 1-361 (443)
3 PLN00221 tubulin alpha chain; 100.0 3E-104 7E-109 901.4 37.0 440 1-442 2-441 (450)
4 PTZ00335 tubulin alpha chain; 100.0 3E-103 7E-108 892.8 38.1 441 1-443 2-442 (448)
5 cd02186 alpha_tubulin The tubu 100.0 2E-100 5E-105 869.2 37.3 434 1-436 1-434 (434)
6 cd02188 gamma_tubulin Gamma-tu 100.0 7E-100 1E-104 861.6 35.2 423 1-433 1-431 (431)
7 PTZ00010 tubulin beta chain; P 100.0 1.9E-99 4E-104 863.3 36.2 428 1-440 2-429 (445)
8 PLN00222 tubulin gamma chain; 100.0 6.3E-99 1E-103 857.8 37.4 430 1-440 3-445 (454)
9 cd02187 beta_tubulin The tubul 100.0 4.1E-98 9E-103 849.5 37.7 424 1-436 1-424 (425)
10 PLN00220 tubulin beta chain; P 100.0 8.2E-98 2E-102 852.1 36.0 426 1-438 2-427 (447)
11 PTZ00387 epsilon tubulin; Prov 100.0 2.3E-97 5E-102 845.1 36.6 414 1-437 2-450 (465)
12 KOG1374|consensus 100.0 5.9E-97 1E-101 775.9 31.6 429 1-439 3-442 (448)
13 PLN00221 tubulin alpha chain; 100.0 3.2E-93 7E-98 811.2 27.3 369 493-861 1-369 (450)
14 PTZ00335 tubulin alpha chain; 100.0 6.6E-92 1.4E-96 800.0 28.4 369 493-861 1-369 (448)
15 cd02190 epsilon_tubulin The tu 100.0 4.1E-91 8.8E-96 780.5 33.3 379 1-436 1-379 (379)
16 cd02189 delta_tubulin The tubu 100.0 4.1E-91 8.9E-96 795.9 32.6 412 3-434 2-445 (446)
17 PLN00222 tubulin gamma chain; 100.0 1.6E-89 3.5E-94 780.7 26.8 360 492-854 1-369 (454)
18 cd02188 gamma_tubulin Gamma-tu 100.0 1.8E-89 4E-94 776.5 26.7 360 494-856 1-365 (431)
19 PTZ00010 tubulin beta chain; P 100.0 7.7E-89 1.7E-93 776.1 26.6 364 493-858 1-364 (445)
20 cd02186 alpha_tubulin The tubu 100.0 1.2E-88 2.6E-93 773.0 27.4 368 494-861 1-368 (434)
21 KOG1374|consensus 100.0 1.3E-88 2.9E-93 712.9 23.1 365 492-859 1-373 (448)
22 PTZ00387 epsilon tubulin; Prov 100.0 5.8E-88 1.3E-92 768.0 26.6 355 493-859 1-390 (465)
23 PLN00220 tubulin beta chain; P 100.0 4.1E-87 8.8E-92 764.0 26.7 364 493-858 1-364 (447)
24 cd02187 beta_tubulin The tubul 100.0 7.2E-87 1.6E-91 757.4 27.4 363 494-858 1-363 (425)
25 cd06059 Tubulin The tubulin su 100.0 1.5E-83 3.3E-88 724.4 34.2 382 2-435 1-382 (382)
26 KOG1376|consensus 100.0 1.3E-84 2.8E-89 681.7 19.8 405 1-430 2-406 (407)
27 cd02189 delta_tubulin The tubu 100.0 1.5E-79 3.3E-84 700.8 25.9 347 496-854 2-380 (446)
28 cd02190 epsilon_tubulin The tu 100.0 3.2E-79 7E-84 684.5 23.4 316 494-856 1-316 (379)
29 KOG1376|consensus 100.0 4.8E-78 1E-82 632.2 13.8 337 493-837 1-337 (407)
30 cd06059 Tubulin The tubulin su 100.0 8.2E-71 1.8E-75 621.0 24.7 316 495-853 1-316 (382)
31 cd00286 Tubulin_FtsZ Tubulin/F 100.0 4.8E-64 1E-68 556.4 23.5 315 495-853 1-315 (328)
32 KOG1375|consensus 100.0 4.1E-63 8.9E-68 523.4 15.6 344 46-439 9-352 (369)
33 cd00286 Tubulin_FtsZ Tubulin/F 100.0 4.3E-60 9.3E-65 524.8 27.5 328 2-382 1-328 (328)
34 KOG1375|consensus 100.0 9.1E-54 2E-58 452.5 10.7 282 538-859 8-289 (369)
35 PF00091 Tubulin: Tubulin/FtsZ 100.0 1.3E-49 2.8E-54 415.2 10.5 216 495-718 1-216 (216)
36 PF00091 Tubulin: Tubulin/FtsZ 100.0 2E-47 4.2E-52 398.8 10.9 215 2-226 1-215 (216)
37 cd06060 misato Human Misato sh 100.0 2.7E-45 5.9E-50 417.9 27.9 411 1-435 1-493 (493)
38 cd06060 misato Human Misato sh 100.0 2.1E-35 4.6E-40 336.9 21.0 305 494-815 1-347 (493)
39 smart00864 Tubulin Tubulin/Fts 100.0 1.9E-36 4.2E-41 310.2 9.1 185 543-738 3-192 (192)
40 smart00864 Tubulin Tubulin/Fts 100.0 2E-34 4.2E-39 295.4 11.9 185 50-247 3-192 (192)
41 cd02202 FtsZ_type2 FtsZ is a G 100.0 2.8E-31 6.1E-36 294.5 14.6 282 496-830 3-315 (349)
42 cd02202 FtsZ_type2 FtsZ is a G 100.0 7.1E-30 1.5E-34 283.3 15.5 219 3-273 3-233 (349)
43 KOG2530|consensus 100.0 5.6E-29 1.2E-33 268.8 12.2 238 1-258 2-324 (483)
44 cd02191 FtsZ FtsZ is a GTPase 100.0 9.8E-28 2.1E-32 261.3 16.9 270 495-830 2-274 (303)
45 cd02191 FtsZ FtsZ is a GTPase 99.9 1.3E-26 2.7E-31 252.6 15.3 204 3-260 3-206 (303)
46 TIGR00065 ftsZ cell division p 99.9 1.3E-25 2.8E-30 248.4 12.1 273 495-830 19-294 (349)
47 KOG2530|consensus 99.9 1.8E-25 3.9E-30 241.8 12.2 240 493-749 1-324 (483)
48 cd02201 FtsZ_type1 FtsZ is a G 99.9 3.3E-25 7.3E-30 242.7 11.7 270 496-830 3-275 (304)
49 TIGR00065 ftsZ cell division p 99.9 9.1E-25 2E-29 241.6 14.4 204 3-260 20-223 (349)
50 cd02201 FtsZ_type1 FtsZ is a G 99.9 2.3E-24 5E-29 236.1 13.9 207 3-262 3-209 (304)
51 PRK13018 cell division protein 99.9 2E-23 4.4E-28 231.5 16.7 270 495-830 30-301 (378)
52 PRK13018 cell division protein 99.9 3.1E-23 6.8E-28 230.0 14.0 204 3-260 31-234 (378)
53 PF03953 Tubulin_C: Tubulin C- 99.9 9.9E-24 2.2E-28 201.5 8.2 104 755-858 1-104 (126)
54 PF03953 Tubulin_C: Tubulin C- 99.9 4.9E-22 1.1E-26 189.9 7.8 126 264-394 1-126 (126)
55 PRK09330 cell division protein 99.8 3.3E-21 7.2E-26 214.0 12.9 206 2-260 15-220 (384)
56 PRK09330 cell division protein 99.8 3.4E-21 7.3E-26 214.0 11.5 273 495-830 15-288 (384)
57 PF14881 Tubulin_3: Tubulin do 99.8 2.1E-19 4.6E-24 181.0 11.8 151 83-245 17-180 (180)
58 PF14881 Tubulin_3: Tubulin do 99.7 1E-16 2.3E-21 161.6 10.5 118 607-736 56-180 (180)
59 COG0206 FtsZ Cell division GTP 99.4 4.2E-12 9.2E-17 138.7 12.3 145 109-262 75-219 (338)
60 COG0206 FtsZ Cell division GTP 99.3 1.8E-11 3.8E-16 133.8 12.1 212 597-830 72-285 (338)
61 PF10644 Misat_Tub_SegII: Misa 99.1 3E-11 6.6E-16 113.3 4.8 67 1-75 1-71 (115)
62 PF10644 Misat_Tub_SegII: Misa 98.9 6.3E-10 1.4E-14 104.4 4.6 64 494-565 1-68 (115)
63 smart00865 Tubulin_C Tubulin/F 98.5 9.5E-08 2.1E-12 89.9 3.1 93 740-845 1-97 (120)
64 smart00865 Tubulin_C Tubulin/F 98.1 8.3E-07 1.8E-11 83.5 1.3 113 249-392 1-118 (120)
65 PF13809 Tubulin_2: Tubulin li 97.0 0.0083 1.8E-07 67.5 13.7 102 586-687 100-218 (345)
66 PF13809 Tubulin_2: Tubulin li 97.0 0.01 2.2E-07 66.8 13.9 62 136-197 150-219 (345)
67 PLN02847 triacylglycerol lipas 62.1 19 0.0004 43.1 6.9 115 542-662 154-287 (633)
68 PF12953 DUF3842: Domain of un 53.9 12 0.00027 35.7 3.0 29 144-172 6-35 (131)
69 PLN02847 triacylglycerol lipas 50.9 56 0.0012 39.3 8.4 116 49-171 154-287 (633)
70 PRK14484 phosphotransferase ma 46.6 16 0.00035 34.9 2.6 43 116-161 41-83 (124)
71 cd00741 Lipase Lipase. Lipase 45.3 33 0.00071 33.4 4.8 59 597-659 1-59 (153)
72 PF03610 EIIA-man: PTS system 45.1 24 0.00053 32.9 3.6 33 115-147 39-71 (116)
73 PF12953 DUF3842: Domain of un 43.1 23 0.0005 33.9 3.0 53 635-701 6-59 (131)
74 PRK14484 phosphotransferase ma 42.1 20 0.00043 34.3 2.5 43 607-652 41-83 (124)
75 PF03610 EIIA-man: PTS system 40.8 30 0.00064 32.3 3.5 33 606-638 39-71 (116)
76 cd00519 Lipase_3 Lipase (class 37.9 37 0.00081 35.5 4.1 74 593-671 97-170 (229)
77 cd00006 PTS_IIA_man PTS_IIA, P 35.0 71 0.0015 30.1 5.1 31 116-146 40-70 (122)
78 PF01764 Lipase_3: Lipase (cla 33.1 33 0.00072 32.5 2.6 56 596-655 35-91 (140)
79 TIGR00824 EIIA-man PTS system, 32.2 59 0.0013 30.5 4.0 32 116-147 41-72 (116)
80 PF06908 DUF1273: Protein of u 30.7 1E+02 0.0022 31.4 5.6 85 606-699 27-111 (177)
81 PF01713 Smr: Smr domain; Int 28.9 1.8E+02 0.0039 25.2 6.3 55 608-665 9-69 (83)
82 cd00741 Lipase Lipase. Lipase 28.7 84 0.0018 30.5 4.6 51 107-161 2-52 (153)
83 PF06908 DUF1273: Protein of u 28.7 1.2E+02 0.0025 31.0 5.7 84 115-207 27-110 (177)
84 cd00006 PTS_IIA_man PTS_IIA, P 27.9 70 0.0015 30.1 3.8 31 607-637 40-70 (122)
85 cd00519 Lipase_3 Lipase (class 27.6 64 0.0014 33.7 3.8 67 106-177 101-167 (229)
86 PF01713 Smr: Smr domain; Int 27.0 1.9E+02 0.0042 25.0 6.2 56 117-175 9-70 (83)
87 PF08259 Periviscerokin: Periv 26.0 32 0.00069 18.6 0.5 9 749-757 3-11 (11)
88 PF12210 Hrs_helical: Hepatocy 25.0 65 0.0014 29.2 2.7 53 378-435 27-88 (96)
89 TIGR00824 EIIA-man PTS system, 24.6 93 0.002 29.2 3.9 32 607-638 41-72 (116)
90 PF09370 TIM-br_sig_trns: TIM- 22.2 52 0.0011 35.5 1.8 33 117-157 1-33 (268)
91 TIGR02364 dha_pts dihydroxyace 22.1 69 0.0015 30.6 2.5 54 116-174 41-96 (125)
92 COG0572 Udk Uridine kinase [Nu 22.0 97 0.0021 32.6 3.8 69 629-707 9-79 (218)
93 TIGR00262 trpA tryptophan synt 21.8 2.3E+02 0.005 30.5 6.8 75 121-214 154-234 (256)
94 COG0159 TrpA Tryptophan syntha 21.7 2.3E+02 0.0049 30.8 6.5 77 121-217 161-243 (265)
95 CHL00200 trpA tryptophan synth 21.3 2.3E+02 0.0051 30.7 6.7 76 120-214 157-238 (263)
No 1
>COG5023 Tubulin [Cytoskeleton]
Probab=100.00 E-value=1.9e-124 Score=982.10 Aligned_cols=437 Identities=62% Similarity=1.081 Sum_probs=422.5
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
|||||||+||||||||++||+++|+||||+++|..+... +..++++++||+|...+|||||||+|||||+||+.+++|
T Consensus 2 REIItlq~GQcGnQiG~~fWe~~c~EHGI~~~G~~~~~~--~~~~er~~vfF~e~~~~k~vPRaI~vDLEP~vid~v~~g 79 (443)
T COG5023 2 REIITLQVGQCGNQIGNAFWETLCLEHGIGPDGTLLDSS--DEGDERFDVFFYEASDGKFVPRAILVDLEPGVIDQVRNG 79 (443)
T ss_pred ceeEEEecccchhHHHHHHHHHHHHhhCcCCCCCCCCCc--ccccccccceeeecCCCccccceEEEecCcchHhhhccC
Confidence 899999999999999999999999999999999965433 334688999999999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+++.+|+|++++.+++||||||| +|+|++|++..|+++|+|||++|.||.||||+++||+|||||||+|+.|+|+|++
T Consensus 80 ~y~~lf~Pen~i~gkegAgNnwA--~GhYtvG~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~ 157 (443)
T COG5023 80 PYGSLFHPENIIFGKEGAGNNWA--RGHYTVGKEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLRE 157 (443)
T ss_pred ccccccChhheeecccccccccc--ccccchhHHHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
|||||.+.+|+|+|.++.++++|||||++|++++|.|+||+++++||+||+++|.+.|++++|+|.++|+|||++|+++|
T Consensus 158 eypkK~~~tfSV~P~p~~Sd~VVePYNsvLt~h~l~ensD~tf~~DNeal~di~~~~L~i~~P~y~~lN~LIs~VmSsvT 237 (443)
T COG5023 158 EYPKKIKLTFSVFPAPKVSDVVVEPYNSVLTLHRLLENSDCTFVVDNEALYDICRRNLRIQNPSYDDLNQLISTVMSSVT 237 (443)
T ss_pred hcchhheeEEEeccCCccCcceecccHHHHHHHHHHhcCCceEEechHHHHHHHHHhcCCCCCChHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhh
Q psy15389 241 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 320 (864)
Q Consensus 241 ~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 320 (864)
.++||||++|.||.+|.+|||||||+||++++|+|+++..+..+++.|+.++++++|++.|+|++|+|++|+|+++++++
T Consensus 238 tslRfpG~ln~dl~~~~~nLVP~PrlHF~l~sytP~~s~~~~~~~~~sv~evt~~~f~p~N~mv~~dpr~g~y~~~~~l~ 317 (443)
T COG5023 238 TSLRFPGYLNVDLRSIQTNLVPYPRLHFPLVSYTPFTSDGSAAHEKNSVSEVTNQLFDPKNQMVSCDPRKGRYMAVCLLF 317 (443)
T ss_pred heeecCccccchHHHHHhcCCCCCcccccccccCcccchhhHHHhcccHHHHHHHHhCcccceeeecCCCCeeeehhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHH
Q psy15389 321 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 400 (864)
Q Consensus 321 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~ 400 (864)
||+++++++.+++.+++.|+.++|++|+|+++++++|+.+|... .+.++++|+|+|+|+|...|+++.+||++||
T Consensus 318 rG~v~~~dV~~a~~~v~~k~~~~Fv~W~P~~~~vai~~~~P~~~-----~~~~~s~~~lsNtTsi~e~fkr~~~qFd~mf 392 (443)
T COG5023 318 RGDVDPRDVSRAVTRVQSKRTIQFVEWCPTGFKVAICKRPPSEP-----AEVDVSGCMLSNTTSIAEAFKRIDDQFDLMF 392 (443)
T ss_pred hcCCCHHHHHHHHHHHHhcCcccccccCCcceeeeeeccCCccc-----ccceeeeEeecCcHHHHHHHHHhhhHHHHHH
Confidence 99999999999999999999999999999999999999988433 3567899999999999999999999999999
Q ss_pred hcccceeccccCCCCcccHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy15389 401 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSVEGEGE 446 (864)
Q Consensus 401 ~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~~~~~~~~~~~ 446 (864)
+||||||||.++||||+||.||++.+++|.++|++++++...++++
T Consensus 393 ~krAFlhwY~~egmee~EFsEare~~~~L~~eY~~~~~~s~~~~~~ 438 (443)
T COG5023 393 KKRAFLHWYVGEGMEEGEFSEAREDVADLEEEYEAAEQDSYLDDEE 438 (443)
T ss_pred HhhHHHHHHhhccCcccchhhHHHHHHHHHHHHHHhccccccchhh
Confidence 9999999999999999999999999999999999999887766644
No 2
>COG5023 Tubulin [Cytoskeleton]
Probab=100.00 E-value=1.6e-114 Score=907.43 Aligned_cols=361 Identities=62% Similarity=1.103 Sum_probs=352.3
Q ss_pred ceeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccc
Q psy15389 493 SRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 572 (864)
Q Consensus 493 ~rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~ 572 (864)
||||||||+||||||||++||+++|+||||.++|.+..... ..++++++||+|++.|||+||||+|||||+||+.+++
T Consensus 1 mREIItlq~GQcGnQiG~~fWe~~c~EHGI~~~G~~~~~~~--~~~er~~vfF~e~~~~k~vPRaI~vDLEP~vid~v~~ 78 (443)
T COG5023 1 MREIITLQVGQCGNQIGNAFWETLCLEHGIGPDGTLLDSSD--EGDERFDVFFYEASDGKFVPRAILVDLEPGVIDQVRN 78 (443)
T ss_pred CceeEEEecccchhHHHHHHHHHHHHhhCcCCCCCCCCCcc--cccccccceeeecCCCccccceEEEecCcchHhhhcc
Confidence 89999999999999999999999999999999999765443 3468899999999999999999999999999999999
Q ss_pred ccccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhh
Q psy15389 573 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 652 (864)
Q Consensus 573 ~~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~de 652 (864)
|+|+.+|+|+|++++++|||||||+|+|++|+++.|.++|+|||++|.||.||||+++||+||||||||||+|||+|++|
T Consensus 79 g~y~~lf~Pen~i~gkegAgNnwA~GhYtvG~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~e 158 (443)
T COG5023 79 GPYGSLFHPENIIFGKEGAGNNWARGHYTVGKEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREE 158 (443)
T ss_pred CccccccChhheeeccccccccccccccchhHHHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccc
Q psy15389 653 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 732 (864)
Q Consensus 653 yp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~ 732 (864)
||||.+.+++|||.++.+++||||||++|++++|.|+|||++++||+||++||.+.|++++|+|.++|+|||++||++|+
T Consensus 159 ypkK~~~tfSV~P~p~~Sd~VVePYNsvLt~h~l~ensD~tf~~DNeal~di~~~~L~i~~P~y~~lN~LIs~VmSsvTt 238 (443)
T COG5023 159 YPKKIKLTFSVFPAPKVSDVVVEPYNSVLTLHRLLENSDCTFVVDNEALYDICRRNLRIQNPSYDDLNQLISTVMSSVTT 238 (443)
T ss_pred cchhheeEEEeccCCccCcceecccHHHHHHHHHHhcCCceEEechHHHHHHHHHhcCCCCCChHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCcccccccccc
Q psy15389 733 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 812 (864)
Q Consensus 733 ~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 812 (864)
++||||++|+||++|.+|||||||+||+.++|+|+++..+..+++.|+.|++++||+|+|||++|||++|+||++++++|
T Consensus 239 slRfpG~ln~dl~~~~~nLVP~PrlHF~l~sytP~~s~~~~~~~~~sv~evt~~~f~p~N~mv~~dpr~g~y~~~~~l~r 318 (443)
T COG5023 239 SLRFPGYLNVDLRSIQTNLVPYPRLHFPLVSYTPFTSDGSAAHEKNSVSEVTNQLFDPKNQMVSCDPRKGRYMAVCLLFR 318 (443)
T ss_pred eeecCccccchHHHHHhcCCCCCcccccccccCcccchhhHHHhcccHHHHHHHHhCcccceeeecCCCCeeeehhHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCC
Q psy15389 813 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 855 (864)
Q Consensus 813 G~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~ 855 (864)
|+++++||++++.++|.|++++||+|+|++||||||+.||...
T Consensus 319 G~v~~~dV~~a~~~v~~k~~~~Fv~W~P~~~~vai~~~~P~~~ 361 (443)
T COG5023 319 GDVDPRDVSRAVTRVQSKRTIQFVEWCPTGFKVAICKRPPSEP 361 (443)
T ss_pred cCCCHHHHHHHHHHHHhcCcccccccCCcceeeeeeccCCccc
Confidence 9999999999999999999999999999999999999999433
No 3
>PLN00221 tubulin alpha chain; Provisional
Probab=100.00 E-value=3.2e-104 Score=901.41 Aligned_cols=440 Identities=86% Similarity=1.402 Sum_probs=416.1
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
|||||||+||||||||.+||+++|+||+++++|...........++.+++||+|..+++|+|||||||+||++|++++.+
T Consensus 2 ~EiItiqvGQcGnQIG~~fW~~l~~Eh~i~~~g~~~~~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~e~~~i~~i~~~ 81 (450)
T PLN00221 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81 (450)
T ss_pred CeEEEEeCCchHHHHHHHHHHHHHHHhCcCCCCCccCCccccccchhhhhheeccCCcccccchhcCCCChhhhhhhccC
Confidence 79999999999999999999999999999999976443322223467899999999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+++++|+|++++.+++|+||||| +|||..|+++.|+++|+||+++|+||+||||+++||++||||||+|++|+|+|+|
T Consensus 82 ~~~~lf~~~~~i~~~~gagNnwa--~Gy~~~g~~~~~~i~d~ir~~~E~cD~l~gf~i~~Sl~GGtGSGlgs~~le~l~d 159 (450)
T PLN00221 82 TYRQLFHPEQLISGKEDAANNFA--RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159 (450)
T ss_pred ccccccCccceeccCCCcccccc--ccccchhHHHHHHHHHHHHHHHHhccCccceeEeeccCCCccchHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
+||++.+.+++|+|++..++++|+|||++|+|++|.+++|++++|||++|+++|.+.++++.|+|+++|+|||++|+++|
T Consensus 160 ~y~~~~~~~~~v~P~~~~~~~vv~~YN~~Lsl~~l~e~~d~~~~~dN~al~~~~~~~~~~~~p~~~dlN~lIa~~is~~T 239 (450)
T PLN00221 160 DYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLT 239 (450)
T ss_pred hcccccceeeEeeCCCcCCCCchhhhHHHHhHHHHHhhCceeeecchHHHHHHHHhhcCCCCCCHHHHHHHHhhhccccc
Confidence 99999999999999986689999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhh
Q psy15389 241 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 320 (864)
Q Consensus 241 ~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 320 (864)
+++||||.++.|++++.+||||||++||++++++|+++..+..++.+++.+|++++|++.++++.++|+.++|+|+++++
T Consensus 240 ~s~RF~g~ln~dl~~l~~nLvP~P~lhfl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~~~l~~~~~~~~kyla~~~~~ 319 (450)
T PLN00221 240 ASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMY 319 (450)
T ss_pred ccccccccccCCHHHHHHhcCCCCCceeeccccCccccccccccccCCHHHHHHHHhcccceeeecCCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999998776677888999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHH
Q psy15389 321 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 400 (864)
Q Consensus 321 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~ 400 (864)
||++.+.++.+.+.+++.++.+.|++|+|+++++++|.++|...++..+.+.++++++++|+|+|..+|+++.++|++||
T Consensus 320 RG~~~~~~v~~~~~~~~~~~~~~f~~W~p~~~~~~i~~~~~~~~~~~~~~~~~~s~~~l~NstsI~~~f~~i~~~f~~mf 399 (450)
T PLN00221 320 RGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMY 399 (450)
T ss_pred cCCCCHHHHHHHHHHHHhcCCccccccCCCCEeeeecCCCCccCCCccccccceeEEEecCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999988889999999999999999999988766666666778999999999999999999999999999
Q ss_pred hcccceeccccCCCCcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy15389 401 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSVE 442 (864)
Q Consensus 401 ~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~~~~~~~ 442 (864)
+||||||||+++||||+||.||+++|++|+++|+++..+..+
T Consensus 400 ~rkAflh~Y~~eGmee~eF~EA~~~l~~li~~Y~~~~~~~~~ 441 (450)
T PLN00221 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAE 441 (450)
T ss_pred hhcchhhhhhccCCchHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999998755443
No 4
>PTZ00335 tubulin alpha chain; Provisional
Probab=100.00 E-value=3.2e-103 Score=892.80 Aligned_cols=441 Identities=86% Similarity=1.382 Sum_probs=416.6
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
||||+||+||||||||.+||+++++||+++++|......+.+..++.+++||+|..+++|+|||||||+||++|++++.+
T Consensus 2 ~EiI~iqiGqcGnqiG~~fW~~~~~Eh~i~~~g~~~~~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~e~~~i~~i~~~ 81 (448)
T PTZ00335 2 REVISIHIGQAGIQVGNACWELFCLEHGIQPDGQMPSDKNIGVEDDAFNTFFSETGAGKHVPRCVFLDLEPTVIDEVRTG 81 (448)
T ss_pred CcEEEEeCCccHHHHHHHHHHHHHHHhCcCCCCCccCCCcccccchhhcceeEEcCCCccccccccccCCcchhhhcccC
Confidence 79999999999999999999999999999999976433322223567899999999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+++.+|+|++++.+++|+||||| +|||..|+++.|+++|+|||++|+||++|||+++||+|||||||+|++|+|+|+|
T Consensus 82 ~~~~l~~~~~~i~~~~gagnnwa--~Gy~~~G~~~~d~i~d~ir~~~E~cD~l~gf~i~~Sl~GGTGSGlgs~l~e~l~d 159 (448)
T PTZ00335 82 TYRQLFHPEQLISGKEDAANNFA--RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSV 159 (448)
T ss_pred ccccccCchheeecCCCCCCccc--ccccchhhhHhHHHHHHHHHhHHhccCccceeEeeccCCCccchHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
+||++++++++|+|+...++++++|||++|+|++|.+++|+++++||++|+++|.+.++++.++|+++|++||++|+++|
T Consensus 160 ~yp~~~~~~~~v~P~~~~~~~~v~~YN~~Lsl~~L~e~~d~~~~~dN~al~~i~~~~~~~~~~~~~~~N~~Ia~~is~~t 239 (448)
T PTZ00335 160 DYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLT 239 (448)
T ss_pred hccccceeeEEecCCCCCCCcceeehHHHHhHHHHHhhCCeeeeechHHHHHHHHHhcCCCCCCHHHHHHHHHhhhcccc
Confidence 99999999999999986689999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhh
Q psy15389 241 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 320 (864)
Q Consensus 241 ~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 320 (864)
+++||||.++.|+++|.+||||||++||++++++|+++..+..++.+++.+|++++|++.++++.++|+.++|+|+++++
T Consensus 240 ~~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~n~~~~~~~~~~~~ls~~~~~ 319 (448)
T PTZ00335 240 ASLRFDGALNVDLTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACCLMY 319 (448)
T ss_pred cccccccccCCCHHHHhccccCCCCceecccccCcccccccccccCCCHHHHHHHhcCccceeEecCCCccchHHHHHHH
Confidence 99999999999999999999999999999999999998777777889999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHH
Q psy15389 321 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 400 (864)
Q Consensus 321 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~ 400 (864)
||++...++.+.+.+++.++.+.|++|+|+++++++|.++|...+...+.+.++++++++|+|+|..+|+++.++|++||
T Consensus 320 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lsNstsI~~~f~~i~~~f~~mf 399 (448)
T PTZ00335 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMY 399 (448)
T ss_pred cCCCCHHHHHHHHHHHHhhCCCcCCccCCCCEeeeecCCCCccCCCccccccceEEEEecCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999899999999999999999999988766666666678999999999999999999999999999
Q ss_pred hcccceeccccCCCCcccHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy15389 401 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSVEG 443 (864)
Q Consensus 401 ~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~~~~~~~~ 443 (864)
+||||||||+++||||+||.||+++|++|+++|+++..+..+|
T Consensus 400 ~rkAflh~Y~~eGmee~eF~EA~~~l~~li~~Y~~~~~~~~~~ 442 (448)
T PTZ00335 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESADE 442 (448)
T ss_pred hhcchhhhhhccCCchHHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 9999999999999999999999999999999999987554433
No 5
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=100.00 E-value=2.3e-100 Score=869.22 Aligned_cols=434 Identities=92% Similarity=1.485 Sum_probs=412.3
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
||||+||+||||||||.+||+++++||+++++|....+.+.+..++.+++||+|+.+++|+||||+||+||++|++++.+
T Consensus 1 ~EiI~i~iGqcGnqiG~~~w~~l~~Eh~~~~~g~~~~~~~~~~~~~~~~~ff~e~~~~~~~pRav~iD~e~~~i~~i~~~ 80 (434)
T cd02186 1 REVISIHIGQAGIQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGSGKHVPRAVFIDLEPTVIDEVRTG 80 (434)
T ss_pred CceEEEeCCchHhHHHHHHHHHHHHHhCcCCCCCccCCccccccccccceEEEECCCCcCcccccccCCcHHHHHhhccC
Confidence 89999999999999999999999999999999876544332234568899999999999999999999999999999998
Q ss_pred cccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+++.+|++++++.+++|+||||| +|||..|+++.|+++|+||+++|+||++|||+++||+|||||||+|++|+|+|+|
T Consensus 81 ~~~~l~~~~~~~~~~~g~gnnwa--~Gy~~~G~~~~~~i~d~ir~~~E~cD~l~gf~i~~sl~GGTGSGlgs~l~e~l~d 158 (434)
T cd02186 81 TYRQLFHPEQLISGKEDAANNFA--RGHYTIGKEIIDLVLDRIRKLADNCTGLQGFLIFHSFGGGTGSGFGSLLLERLSV 158 (434)
T ss_pred ccccccCccceeecCCCCCcccc--cccchhHHHHHHHHHHHHHHHHhcCCCcceeEEEeccCCCcchhHHHHHHHHHHH
Confidence 88999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
+||++++++++|+|+...++++++|||++|+|++|.+++|++++|||++|+++|.+.++++.++|+++|++||++|+++|
T Consensus 159 ~y~~~~~~~~~v~P~~~~~~~~v~~YN~~lsl~~l~e~~d~~~~~dN~al~~~~~~~~~~~~~~~~~lN~iIa~~l~~~t 238 (434)
T cd02186 159 DYGKKSKLEFTVYPSPQVSTAVVEPYNSVLTTHSLLEHSDCSFMVDNEAIYDICRRNLDIERPTYTNLNRLIAQVVSSIT 238 (434)
T ss_pred hcCccceeeEEEeCCCCCCCCeeeehHHHHhHHHHHhhCCeeeeeccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccc
Confidence 99999999999999986678999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhh
Q psy15389 241 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 320 (864)
Q Consensus 241 ~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 320 (864)
+++||||.++.|+++|+++|||||++||++++++|+++..+..++.+++.+|++++|++.++|+.++++.++|+|+++++
T Consensus 239 ~~~rf~g~~~~~l~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~~~m~~~~~~~~~~la~~~~~ 318 (434)
T cd02186 239 ASLRFDGALNVDLNEFQTNLVPYPRIHFPLVSYAPIISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLY 318 (434)
T ss_pred cceecCCccCCCHHHHHhhccccccceeeccccCcccchhhccccCCCHHHHHHHHhCccceeeecCCcchhHHHHHHHH
Confidence 99999999999999999999999999999999999998777777889999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHH
Q psy15389 321 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 400 (864)
Q Consensus 321 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~ 400 (864)
||++.++++.+.+..++.++.+.|++|+|+++++++|.++|...++..+.+.++++++++|+|+|..+|+++.++|++||
T Consensus 319 RG~~~~~~v~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~f~~i~~~f~~mf 398 (434)
T cd02186 319 RGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLDHKFDLMY 398 (434)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCcCcccCCCcEeeeecCCCCccCCCccccccceEEEEecCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888899999999999999999988766666666678999999999999999999999999999
Q ss_pred hcccceeccccCCCCcccHHHHHHHHHHHHHHHHHh
Q psy15389 401 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 436 (864)
Q Consensus 401 ~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~ 436 (864)
+||||||||+++||||+||.||+++|++|+++|+++
T Consensus 399 ~rkAflh~Y~~~Gmee~ef~ea~~~l~~li~~Y~~~ 434 (434)
T cd02186 399 SKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 434 (434)
T ss_pred hhcchhhhhcCcCCchHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999863
No 6
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=100.00 E-value=6.9e-100 Score=861.57 Aligned_cols=423 Identities=35% Similarity=0.656 Sum_probs=399.9
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
||||+||+||||||||.+||+++++||+++++|..+.+.. ..++.+++||+|..+++|+||||+|||||++|++++.+
T Consensus 1 ~EiI~i~iGQcGnqIG~~~We~l~~eh~~~~~g~~~~~~~--~~~~~~~~fF~e~~~~~~~pRav~iD~Ep~vi~~i~~~ 78 (431)
T cd02188 1 REIITLQVGQCGNQIGSEFWKQLCAEHGISPDGILEDFAT--DGGDRKDVFFYQADDEHYVPRAILIDLEPRVINSIQNS 78 (431)
T ss_pred CcEEEEEcCchHhHHHHHHHHHHHHHhCCCCCCCcCCCcc--ccccccceeEEECCCCccCCcceeccCCcchhhhhhcC
Confidence 8999999999999999999999999999999987644321 23567899999999999999999999999999999999
Q ss_pred cccccCCCCccccccc--ccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKE--DAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERL 158 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~--gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L 158 (864)
+++.+|+|++++.+++ |+||||| +||+ .|++..|+++|+||+++|+||++|||+++||+|||||||+|++|+|+|
T Consensus 79 ~~~~lf~~~~~~~~~~~~gagnnwa--~Gy~-~g~~~~d~i~d~ir~~~E~cd~l~gf~i~~SlgGGTGSG~gs~l~e~L 155 (431)
T cd02188 79 EYRNLYNPENIFLSKHGGGAGNNWA--SGYS-QGEEVQEEILDIIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERL 155 (431)
T ss_pred ccccccCccceEeeccCCCccccHH--HHHH-HHHHHHHHHHHHHHHHHhcCCCcceeEEEecCCCCcchhHHHHHHHHH
Confidence 9999999999999998 9999999 9965 699999999999999999999999999999999999999999999999
Q ss_pred HHHhCCcceeEEEEecCCCC-CcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHh
Q psy15389 159 SVDYGKKSKLEFAIYPAPQV-STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 237 (864)
Q Consensus 159 ~deyp~~~i~~~~v~P~~~~-~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~ 237 (864)
+|+||++.+++++|+|++.. ++++++|||++|+|++|.+++|++++|||++|+++|.+.++++.++|+++|++||++|+
T Consensus 156 ~d~y~~~~~~~~~V~P~~~~~s~~~v~~YN~~lsl~~l~e~~d~~~~~dN~al~~i~~~~l~~~~~~~~~~N~~ia~~ls 235 (431)
T cd02188 156 NDRYPKKLIQTYSVFPNQDESSDVVVQPYNSILTLKRLILNADCVVVLDNTALNRIATDRLHIQNPTFDQINSLVSTVMS 235 (431)
T ss_pred HhHcCcceeeeEEecCCCccCCCccceecHHHHHHHHHHHhCCeeeecchHHHHHHHHHhcCCCCCCHHHHHHHHhccCC
Confidence 99999999999999998753 58899999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCCCCChhhhhhcCcCCCCcccCccccccccchh-hhhhcccCHHHHHHHhcCCCCceeecCC-CCCchhh
Q psy15389 238 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE-KAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMA 315 (864)
Q Consensus 238 ~~t~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~-~~~~~~~s~~~i~~~~~~~~~~~~~~~~-~~~~~ls 315 (864)
++|+++||||.+|.|+.++.+||||||++||++++++|+++.. +..++..++.+|++.+|++.++|+.+++ ++++|+|
T Consensus 236 ~~t~~~Rf~g~ln~dl~~i~tnLvP~P~lhfl~~s~~P~~~~~~~~~~~~~s~~~l~~~l~~~~n~m~~~~~~~~~k~la 315 (431)
T cd02188 236 ASTTTLRYPGYMNNDLISLIASLIPTPRLHFLMTSYTPLTSDQIAASVRKTTVLDVMRRLLQPKNIMVSTATRKNGCYIS 315 (431)
T ss_pred CcccceecCCccCCCHHHHHHhcCCCCCceeeccccCccccchhhcceecCCHHHHHHHHhccccceeecCCCccchhHH
Confidence 9999999999999999999999999999999999999999877 5778889999999999999999999998 8999999
Q ss_pred hhhhhcCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHH
Q psy15389 316 CCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHK 395 (864)
Q Consensus 316 ~~~~~RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~ 395 (864)
+++++||++.+.++.+.+.+++.++.++|++|+|+++++++|.++|...++ .++++++++|+|+|..+|+++.++
T Consensus 316 ~~~~~RG~~~~~~~~~~~~~lk~~~~~~f~~W~p~~~~~~~~~~~~~~~~~-----~~~s~~~lsNst~I~~~f~~i~~k 390 (431)
T cd02188 316 ILNIIQGEVDPTQVHKSLQRIRERRLANFIPWGPASIQVALSKKSPYVPTA-----HRVSGLMLANHTSIASLFERILKQ 390 (431)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHhhccccCcccCCCCEEEEEeccCCccCCC-----CceeEEEecCChHHHHHHHHHHHH
Confidence 999999999999999999999988888999999999999999887754332 357899999999999999999999
Q ss_pred HHHHHhcccceeccccCCCC---cccHHHHHHHHHHHHHHH
Q psy15389 396 FDLMYAKRAFVHWYVGEGME---EGEFSEAREDLAALEKDY 433 (864)
Q Consensus 396 f~~m~~rrAflH~Y~~eGme---e~eF~Ea~~~l~~li~~Y 433 (864)
|++||+||||||||+++||| |+||.||+++|++|+++|
T Consensus 391 f~~mf~krAflH~Y~~eGme~~~e~eF~ea~~~l~~li~~Y 431 (431)
T cd02188 391 FDKLRKRRAFLDNYRKEDMFSDNLDEFDESREVVQSLIEEY 431 (431)
T ss_pred HHHHHhhCchhhhccCcCccccchhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999 999999999999999998
No 7
>PTZ00010 tubulin beta chain; Provisional
Probab=100.00 E-value=1.9e-99 Score=863.28 Aligned_cols=428 Identities=42% Similarity=0.802 Sum_probs=406.8
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
||||+||+||||||||.+||+++++||+++++|.....++. ..+.+++||+|..+++|+||||+||+||++|++++.+
T Consensus 2 ~Eii~i~vGqcGnqiG~~~we~l~~eh~~~~~g~~~~~~~~--~~~~~~~ff~e~~~~~~~pRav~iD~e~~vi~~i~~~ 79 (445)
T PTZ00010 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPTGTYQGDSDL--QLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAG 79 (445)
T ss_pred CcEEEEeccchHhHHHHHHHHHHHHHhCCCCCCCCCCCCcc--cccccceeecccCCCceEEeeeeccCChhhhhhhccc
Confidence 79999999999999999999999999999998876443221 2357789999999999999999999999999999998
Q ss_pred cccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+++.+|+|++++.+++|+||||| +|||..|+++.++++|+||+++|+||++|||+++||++||||||+|++|+|+|+|
T Consensus 80 ~~~~lf~~~~~~~~~~gagNnwa--~G~~~~g~~~~~~i~d~irk~~E~cd~l~gf~i~~Sl~GGTGSGlgs~l~e~L~d 157 (445)
T PTZ00010 80 PYGQLFRPDNFIFGQSGAGNNWA--KGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKLRE 157 (445)
T ss_pred chhhhcCccceeecccCCccccc--cchhhhhHHHHHHHHHHHhhhhhhccCccceEEEeccCCCccccHHHHHHHHHHh
Confidence 88899999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
+||++.+++++|||++..++++++|||++|++++|.+++|++++|||++|+++|.+.++++.|+|.++|++||++|+++|
T Consensus 158 ey~~~~~~~~~v~P~~~~~~~~v~~YN~~lsl~~l~~~~d~~i~~dN~al~~i~~~~l~~~~p~~~~lN~lIaq~is~~t 237 (445)
T PTZ00010 158 EYPDRIMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADESMCIDNEALYDICFRTLKLTTPTYGDLNHLVSAVMSGVT 237 (445)
T ss_pred hCCccceeeeEecCCcccCccchhhhHHHHhHHHHHhcCCceeeeccHHHHHHHHHhccCCCCCHHHHHHHHHhhccccc
Confidence 99999999999999987789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhh
Q psy15389 241 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 320 (864)
Q Consensus 241 ~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 320 (864)
+++||||.+|.|+.++.+||||||++||++++++|+++..+..++.+++.+|++++|++.+++++++|++++|+|+++++
T Consensus 238 ~~~Rfpg~ln~dl~~l~tnLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~n~~~~~~~~~~k~la~~~~~ 317 (445)
T PTZ00010 238 CCLRFPGQLNSDLRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRGLSVPELTQQMFDAKNMMCAADPRHGRYLTASALF 317 (445)
T ss_pred cceecCCcccccHHHHHHHHhcCCCceeeecccCccccccccccccCCHHHHHHhHhcccceEeecCCCcchhHHHHHHH
Confidence 99999999999999999999999999999999999998777778889999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHH
Q psy15389 321 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 400 (864)
Q Consensus 321 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~ 400 (864)
||++.++++.+.+..++.++.+.|++|+|+++++++|+++|.. .++++++++|+|+|..+|+++.++|++||
T Consensus 318 RG~~~~~~~~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~--------~~~s~~~lsNstsi~~~~~~i~~~f~~m~ 389 (445)
T PTZ00010 318 RGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKG--------LKMSVTFIGNSTAIQEMFRRVGEQFTAMF 389 (445)
T ss_pred cCCCCHHHHHHHHHHHHhhCCccCccccCCCEEEeecCcCCcC--------ccceEEEecCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888999999999999999999987642 46889999999999999999999999999
Q ss_pred hcccceeccccCCCCcccHHHHHHHHHHHHHHHHHhcCCC
Q psy15389 401 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 440 (864)
Q Consensus 401 ~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~~~~~ 440 (864)
+||||||||+++||||+||.||+++|++|+++|+++....
T Consensus 390 ~rrAflh~Y~~eGmee~ef~EA~~~l~~li~~Y~~~~~~~ 429 (445)
T PTZ00010 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429 (445)
T ss_pred hcCchhhhhhccCCcHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999986544
No 8
>PLN00222 tubulin gamma chain; Provisional
Probab=100.00 E-value=6.3e-99 Score=857.80 Aligned_cols=430 Identities=32% Similarity=0.583 Sum_probs=400.8
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
||||+||+||||||||.+||+++++||+++++|....+.+ ..++.+++||+|..+++|+||||||||||++|++++.+
T Consensus 3 ~EiI~i~vGQcGnqiG~~~w~~l~~Eh~i~~~g~~~~~~~--~~~~~~~~fF~e~~~~~~~pRav~iD~e~~vi~~i~~~ 80 (454)
T PLN00222 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFAT--QGGDRKDVFFYQADDEHYIPRALLIDLEPRVINGIQNS 80 (454)
T ss_pred ccEEEEecCchHHHHHHHHHHHHHHHhCCCCCCCccCccc--cccccccceeEEcCCCcccceeeecCCCcchhhhhccC
Confidence 7999999999999999999999999999999987643322 22467899999999999999999999999999999999
Q ss_pred cccccCCCCccccccc--ccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKE--DAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERL 158 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~--gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L 158 (864)
+++.+|+|++++.+++ |+||||| +||+ .|++..|+++|+||+++|+||++|||+++||+|||||||+|++|+|+|
T Consensus 81 ~~~~lf~~~~~~~~~~~~gagnn~a--~Gy~-~g~~~~d~i~d~ir~~~E~cd~l~gf~i~~sl~GGTGSGlgs~lle~L 157 (454)
T PLN00222 81 EYRNLYNHENIFVSDHGGGAGNNWA--SGYH-QGEQVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEAL 157 (454)
T ss_pred ccccccCccceeecccCCCcccchH--HhHH-HHHHHHHHHHHHHHHHHHhCCCccceEEeecCCCCccchHHHHHHHHH
Confidence 9999999999999996 6999999 9955 799999999999999999999999999999999999999999999999
Q ss_pred HHHhCCcceeEEEEecCCC-CCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHh
Q psy15389 159 SVDYGKKSKLEFAIYPAPQ-VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 237 (864)
Q Consensus 159 ~deyp~~~i~~~~v~P~~~-~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~ 237 (864)
+|+||++.+++++|+|++. .++++++|||++|+|++|.+++|+++++||+||+++|.+.++++.|+|+++|++||++|+
T Consensus 158 ~d~y~~~~~~~~~v~P~~~~~~~~vv~~YN~~lsl~~l~~~~D~~~~~dN~al~~ic~~~l~i~~p~~~dlN~lIA~~ls 237 (454)
T PLN00222 158 NDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLHLENPTFAQTNSLVSTVMS 237 (454)
T ss_pred HhhcCCcceeeEEecCCCcccCCceeeecHHHHhHHHHHhcCCeeeEecHHHHHHHHHHhcCCCCCCHHHHHHHhccccC
Confidence 9999999999999999863 578999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCCCCChhhhhhcCcCCCCcccCccccccccch-hhhhhcccCHHHHHHHhcCCCCceeecCCCC-----C
Q psy15389 238 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA-EKAYHEQLSVAEITNACFEPANQMVKCDPRH-----G 311 (864)
Q Consensus 238 ~~t~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~-~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~-----~ 311 (864)
++|+++||||.+|.|++++.+||||||++||++++++|+.+. ....++..++.++++++|++.++++.++|+. +
T Consensus 238 ~~T~s~Rfpg~ln~dl~~l~~nLvP~P~lhfl~~s~~P~~~~~~~~~~~~~s~~~~~~~l~~~~n~~~~~~~~~~~~~~~ 317 (454)
T PLN00222 238 ASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQA 317 (454)
T ss_pred CcccccCCCCccCCCHHHHhhhcCCCCCceeeccccccccccccccceeeCCHHHHHHHHhcccCceeecCCcccccccc
Confidence 999999999999999999999999999999999999999765 2445678899999999999999999998877 9
Q ss_pred chhhhhhhhcCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHH
Q psy15389 312 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 391 (864)
Q Consensus 312 ~~ls~~~~~RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~ 391 (864)
+|+|+++++||++.+.++.+.+..++.++.+.|++|+|+++++++|.++|...+ +.++++++|+|+|+|..+|++
T Consensus 318 k~la~~~~~RG~~~~~~v~~~~~~~~~~~~~~fv~W~p~~~k~~~~~~~~~~~~-----~~~~s~~~lsNst~I~~~f~~ 392 (454)
T PLN00222 318 KYISILNIIQGEVDPTQVHKSLQRIRERKLANFIEWGPASIQVALSRKSPYVQT-----AHRVSGLMLANHTSIRHLFSK 392 (454)
T ss_pred chHHHHHHHhCCCCHHHHHHHHHHHhhhCCccccccCCCCEeeeeccCCCCCCC-----CCceEEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999888999999999999999998775422 245789999999999999999
Q ss_pred HHHHHHHHHhcccceeccccCCCC----cccHHHHHHHHHHHHHHHHHhcCCC
Q psy15389 392 LDHKFDLMYAKRAFVHWYVGEGME----EGEFSEAREDLAALEKDYEEVGMDS 440 (864)
Q Consensus 392 l~~~f~~m~~rrAflH~Y~~eGme----e~eF~Ea~~~l~~li~~Y~~~~~~~ 440 (864)
+.++|++||+||||||||+++||+ ++||.||+++|++|+++|+++...+
T Consensus 393 i~~~f~~mf~rkAflH~Y~~~G~~~d~ee~eF~ea~~~l~~li~~Y~~~~~~~ 445 (454)
T PLN00222 393 CLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESREIVESLVDEYKACESPD 445 (454)
T ss_pred HHHHHHHHHhhCccceeecCCCcccCcchhHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999993 8999999999999999999886443
No 9
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-
Probab=100.00 E-value=4.1e-98 Score=849.47 Aligned_cols=424 Identities=42% Similarity=0.810 Sum_probs=402.7
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
||||+||+||||||||.+||+++++||+++++|....... ...+.+++||+|..+++|+||||+||+||++|++++.+
T Consensus 1 ~eii~i~vGqcGnqiG~~~w~~l~~eh~~~~~g~~~~~~~--~~~~~~~~fF~e~~~~~~~pRav~iD~e~~~i~~i~~~ 78 (425)
T cd02187 1 REIVHIQAGQCGNQIGAKFWEVISDEHGLDPTGTYKGDSD--LQLERINVYFNEASGGKYVPRAILVDLEPGTMDSVRSG 78 (425)
T ss_pred CceEEEeCCccHhHHHHHHHHHHHHHcCCCCCCCccCCcc--ccccccceeEEecCCCceeeeeeeccCChhhhhhhhcC
Confidence 7999999999999999999999999999998886543322 12367789999999999999999999999999999998
Q ss_pred cccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+++.+|++++++.+++|+||||| +|||..|+++.|+++|+||+++|+||++|||+++||+|||||||+|++++|+|+|
T Consensus 79 ~~~~l~~~~~~~~~~~gagnnwa--~G~~~~G~~~~e~i~d~ir~~~E~cD~l~gf~~~~sl~GGTGSG~gs~l~e~l~d 156 (425)
T cd02187 79 PFGQLFRPDNFVFGQSGAGNNWA--KGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 156 (425)
T ss_pred cccceecCcceeeccCCCCCccC--ccchhhcHHHHHHHHHHHHHhhccCCCcceEEEEeecCCCccccHHHHHHHHHHH
Confidence 88889999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
+||++.+++++|+|+...++++|+|||++|+|++|.+++|++++|||++|+++|.+.+++..++|+++|++||++|+++|
T Consensus 157 ~y~~~~~~~~~V~P~~~~~~~~v~~YN~~lsl~~l~~~~d~~i~~dN~al~~i~~~~~~~~~~~~~~~N~~ia~~is~~t 236 (425)
T cd02187 157 EYPDRIMATFSVFPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSAVMSGIT 236 (425)
T ss_pred hcCCcceEEEEEecCCCcCcceeeehHHHHHHHHHHhcCCeEEEeecHHHHHHHHHhcCCCCCCHHHHHHHHhccccccc
Confidence 99999999999999987679999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhh
Q psy15389 241 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 320 (864)
Q Consensus 241 ~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 320 (864)
+++||||.+|.|+.++.+||||||++||++++++|+++..+..++.+++.+|++++|++.++++.++|++++|+|+++++
T Consensus 237 ~s~Rfpg~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~~~~~~~~~~~~~~la~~~~~ 316 (425)
T cd02187 237 TCLRFPGQLNSDLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTAAAIF 316 (425)
T ss_pred eeeecCCccccCHHHHHHhcCCCCCceecccccCccccccccccccCCHHHHHHHHhCccCeeeccCCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999998766667889999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHH
Q psy15389 321 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 400 (864)
Q Consensus 321 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~ 400 (864)
||++.+.++.+.+.+++.++.+.|++|+|+++++++|+++|.. .++++++|+|+|+|..+|+++.++|++||
T Consensus 317 RG~~~~~~~~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~--------~~~s~~~l~N~t~i~~~~~~i~~~f~~m~ 388 (425)
T cd02187 317 RGRVSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG--------LKMSATFIGNSTAIQELFKRISEQFTAMF 388 (425)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCcCCCcCCCCEeeeecCCCCCC--------cceeEEEecCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888899999999999999999887642 45889999999999999999999999999
Q ss_pred hcccceeccccCCCCcccHHHHHHHHHHHHHHHHHh
Q psy15389 401 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 436 (864)
Q Consensus 401 ~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~ 436 (864)
+||||||||+++||||+||.||+++|++|+++|+++
T Consensus 389 ~kkAflh~Y~~~G~ee~ef~Ea~~~l~~li~~Y~~~ 424 (425)
T cd02187 389 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 424 (425)
T ss_pred hcCcchhhhhccCCchHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999986
No 10
>PLN00220 tubulin beta chain; Provisional
Probab=100.00 E-value=8.2e-98 Score=852.06 Aligned_cols=426 Identities=40% Similarity=0.795 Sum_probs=404.3
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
||||+||+||||||||.+||+++++||+++++|......+ ...+.+++||+|..+++|+||||+||+||++|++++.+
T Consensus 2 ~Eii~i~iGqcGnqiG~~~w~~l~~eh~~~~~g~~~~~~~--~~~~~~~~~f~e~~~~~~~pRav~iD~e~~~i~~i~~~ 79 (447)
T PLN00220 2 REILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGTYHGDSD--LQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSG 79 (447)
T ss_pred CceEEEecCccHhHHHHHHHHHHHHHhCCCCCCCcCCCcc--cccccccceeccCCCCcccceeEecCCcHHHHHHHhcC
Confidence 7999999999999999999999999999998887644322 12357789999999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+++.+|+|++++.+++|+||||| +|||+.|+++.|+++|+||+++|+||++|||+++||+|||||||+|++|+|+|+|
T Consensus 80 ~~~~~~~~~~~~~~~~gagnnwa--~G~~~~g~~~~~~~~d~ir~~~E~cd~l~gf~~~~sl~GGTGSG~gs~l~~~l~~ 157 (447)
T PLN00220 80 PYGQIFRPDNFVFGQSGAGNNWA--KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157 (447)
T ss_pred ccccccCccceEecccCCCCccC--ceeecccHHHHHHHHHHHHHHHHhCcCcCceEEEEecCCCccccHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
+||++.+++++|+|++..++++++|||++|+|++|.+++|++++|||++|+++|.+.++++.++|+++|++||+.|+++|
T Consensus 158 ~y~~~~~~~~~v~P~~~~~~~~v~~yN~~lsl~~l~~~~d~~i~~dN~aL~~i~~~~~~i~~~sf~~~N~lIa~~is~it 237 (447)
T PLN00220 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237 (447)
T ss_pred hccccceeeeEEECCCcCCCCccchhHHHHhHHHHHhcCCceEEeehHHHHHHHHHhhcCCCCChHHHHhHhhccccccc
Confidence 99999999999999986789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhh
Q psy15389 241 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 320 (864)
Q Consensus 241 ~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 320 (864)
+++||||.++.|+.++.++|||||++||++++++|+.+..+..++.+++.++++++|++.++++++++.+++|+|+++++
T Consensus 238 ~slRFpG~ln~~l~~l~~nLVP~P~l~Fl~~s~~P~~~~~~~~~~~~t~~~l~~~l~~~~n~l~~~~~~~gk~la~~~~~ 317 (447)
T PLN00220 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMF 317 (447)
T ss_pred hhhccCCcCCccHHHHHHHhCCccceeEeecccCcccccccccccccCHHHHHHHHHhhhhcccccCCCCchhHHHHHHH
Confidence 99999999999999999999999999999999999988766667889999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHH
Q psy15389 321 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 400 (864)
Q Consensus 321 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~ 400 (864)
||++.+.++.+.+.+++.++.+.|++|+|+++++++|.++|.. .++++++|+|+|+|..+|+++.++|++||
T Consensus 318 RG~~~~~ev~~~~~~l~~~~~~~f~~W~p~~~~~~~~~~~~~~--------~~~s~~~l~N~t~i~~~~~~i~~~f~~m~ 389 (447)
T PLN00220 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG--------LKMASTFIGNSTSIQEMFRRVSEQFTAMF 389 (447)
T ss_pred cCCCCHHHHHHHHHHHHhhCCCccccccCCCEEEeecCCCCCC--------cceeeEEecCchHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888889999999999999999987642 35789999999999999999999999999
Q ss_pred hcccceeccccCCCCcccHHHHHHHHHHHHHHHHHhcC
Q psy15389 401 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 438 (864)
Q Consensus 401 ~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~~~ 438 (864)
+||||||||+++||||+||.||+++|++|+++|+++..
T Consensus 390 ~rkAflh~Y~~~Gmee~ef~ea~~~l~~li~~Y~~~~~ 427 (447)
T PLN00220 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427 (447)
T ss_pred hcCcchhhhcccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988764
No 11
>PTZ00387 epsilon tubulin; Provisional
Probab=100.00 E-value=2.3e-97 Score=845.12 Aligned_cols=414 Identities=31% Similarity=0.619 Sum_probs=389.2
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCCcccccccCC-----CC--ccccceeeeCCCCc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHG-IQPDGQMPSDKTIGGGDDSFNTFFSETG-----AG--KHVPRAVFVDLEPT 72 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~-i~~~g~~~~~~~~~~~~~~~~~~F~e~~-----~~--~~~pRailvDle~~ 72 (864)
||||+||+||||||||.+||+++|+||+ ++++|.. ++++++||+|.. .+ +|+||||+||+||+
T Consensus 2 ~EiI~iqvGQCGnQIG~~fW~~l~~Eh~~i~~~g~~---------~~~~~~fF~~~~~~~~~~~~~~~~pRav~vD~Ep~ 72 (465)
T PTZ00387 2 REIVTVQVGQCGNQLGHRFWDVALKEHKKINANPQY---------DDARDSFFENVSENVNRPGKENLKARAVLVDMEEG 72 (465)
T ss_pred CcEEEEEcCchHHHHHHHHHHHHHHHhCccCCCCcc---------cccccceecccccccccCCCccccCcccccCCCcc
Confidence 7999999999999999999999999999 7776643 457789998532 23 49999999999999
Q ss_pred eeeeeecccccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHH
Q psy15389 73 VVDEVRTGTYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTS 152 (864)
Q Consensus 73 ~i~~~~~~~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs 152 (864)
+|++++.++++.+|+|++++.+++|+||||| +|||..|+++.|+++|+||+++|+||++|||+++||+|||||||+|+
T Consensus 73 vi~~i~~~~~~~~f~~~~~i~~~~GaGNnwa--~G~~~~g~~~~d~~~d~Ir~~~E~cD~l~gf~i~~slgGGTGSGlgs 150 (465)
T PTZ00387 73 VLNQILKSPLGDLFDENFFVSDVSGAGNNWA--VGHMEYGDKYIDSISESVRRQVEQCDSLQSFFLMHSLGGGTGSGLGT 150 (465)
T ss_pred HHHHhhcCCcccccCcccccccCCCCCCCcC--CCcccccHHHHHHHHHHHHHHHHhccCcceEEEEeecCCCcchhHHH
Confidence 9999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCC----------
Q psy15389 153 LLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER---------- 222 (864)
Q Consensus 153 ~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~---------- 222 (864)
+|+|+|+|+||++.+++++|||+. .++++++|||++|+|++|.+++|+++++||++|+++|.+.++++.
T Consensus 151 ~lle~l~d~y~~~~~~~~~V~P~~-~~~~vv~pYN~~lsl~~l~e~~d~~i~~dN~aL~~i~~~~~~~~~~~~~~~~~~~ 229 (465)
T PTZ00387 151 RILGMLEDEFPHVFRFCPVVFPSA-VDDVITSPYNSFFALRELIEHADCVLPLDNDALANIADSALSRKKKKLAKGNIKR 229 (465)
T ss_pred HHHHHHHHhcccCceeeeEecCCC-CCcceeccchhHHHHHHHHhhCCeEEEeehHHHHHHHHhhcCccccccccccccc
Confidence 999999999999999999999986 488999999999999999999999999999999999998887763
Q ss_pred -----------------CChhhHHHHHHHHHhhhccccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhc
Q psy15389 223 -----------------PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 285 (864)
Q Consensus 223 -----------------~~~~~~N~lia~~i~~~t~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~ 285 (864)
++|+++|++||++|+++|+++||||.+|+|+.+|.+||||||++||++++++|+.+..+..++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~N~iIa~~l~~~t~~~Rf~g~~n~dl~~i~~nLvP~P~lhFl~~s~~P~~~~~~~~~~ 309 (465)
T PTZ00387 230 GPQPHKYSVAKPTETKKLPYDKMNNIVAQLLSNLTSSMRFEGSLNVDINEITTNLVPYPRLHFLTSSIAPLVSLKDVAVG 309 (465)
T ss_pred cccccccccccccccccccHHHHHHHHHhhhccccceeecCCccCCCHHHHHhhcCCCCCceeeccccCcccchhhcccc
Confidence 789999999999999999999999999999999999999999999999999999887666778
Q ss_pred ccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhhcCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccC
Q psy15389 286 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 365 (864)
Q Consensus 286 ~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~ 365 (864)
..++.+|+.++|++.++|+.++|..++|+|+++++||++.+.++.+.+.+++. .++|++|+|+++++++|.++|..
T Consensus 310 ~~s~~~l~~~l~~~~~~m~~~~~~~~k~la~~~~~RG~~~~~~v~~~~~~lk~--~~~f~~W~p~~~~~~~~~~~~~~-- 385 (465)
T PTZ00387 310 PRRLDQMFKDCLDPDHQMVAATPEAGKYLATALIVRGPQNVSDVTRNILRLKE--QLNMIYWNEDGFKTGLCNVSPLG-- 385 (465)
T ss_pred cCCHHHHHHHHhcccCeeeecCCCcchHHHHHHHHcCCCChHHHHHHHHHHhc--cccccccCCCceEEEeeccCCCC--
Confidence 88999999999999999999999999999999999999999999998887764 48899999999999999987743
Q ss_pred CCCcccccceEEEeeccHHHHHHHHHHHHHHHHHHhcccceeccccCCCCcccHHHHHHHHHHHHHHHHHhc
Q psy15389 366 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 437 (864)
Q Consensus 366 ~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~~ 437 (864)
.++++++++|+|+|..+|+++.++|++||+||||||||+ +|||++||.||+++|++|+++|+++.
T Consensus 386 ------~~~s~~~lsNst~I~~~f~~i~~~f~~mf~rkAflH~Y~-egmee~eF~ea~~~l~~li~~Y~~~~ 450 (465)
T PTZ00387 386 ------QPYSLLCLANNCCIRNKFESMLERFNKLYKRKSHVHHYT-EYLEQAYFDETLETIQNLIDDYAYLQ 450 (465)
T ss_pred ------CceeEEEecCChHHHHHHHHHHHHHHHHHhhcchHHhhh-cccchHHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999999999999999999999999999999 89999999999999999999999986
No 12
>KOG1374|consensus
Probab=100.00 E-value=5.9e-97 Score=775.87 Aligned_cols=429 Identities=34% Similarity=0.616 Sum_probs=402.1
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
|||||||+||||||||.+||+++|+||+|.++|..+...+ ...++.++||+|..++.|+||||||||||+||+.+.++
T Consensus 3 ~eIiTlQ~GQCGNQiG~efwk~L~~Ehgis~~g~l~d~~~--~~~drKdvFFyqadd~~yipRAvLvDlEPrVIn~~~~~ 80 (448)
T KOG1374|consen 3 REIITLQLGQCGNQIGFEFWKQLCLEHGISPDGILEDFAT--EGADRKDVFFYQADDNHYIPRAVLVDLEPRVINQILSS 80 (448)
T ss_pred ceeEEEeccccccHHHHHHHHHHHHhcCCCcCCcccchhh--hCccccccceeeccCCccccceeeeccchHHHhccccc
Confidence 7999999999999999999999999999999998765443 34578899999999999999999999999999999999
Q ss_pred cccccCCCCcccccc--cccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGK--EDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERL 158 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~--~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L 158 (864)
+++.+|++++++..+ .||||||| .|| .+|+++.|+|+|.|+|++|.||+|+||+++||++||||||+||.|+|+|
T Consensus 81 ~~s~l~n~eni~~s~~ggGAGNNWA--~GY-~~G~~~~e~ImdiIdrEad~~DsleGF~l~hSiAGGTGSGlGS~llErL 157 (448)
T KOG1374|consen 81 PYSGLYNPENIFLSDHGGGAGNNWA--SGY-SQGERVQEDIMDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSFLLERL 157 (448)
T ss_pred hhhcccCccceEEecCCCCcccccc--ccc-ccchhhHHHHHHHHHHhhcCCCcccceeEEEeecCCCCcchHHHHHHHH
Confidence 999999999998754 57999999 995 5699999999999999999999999999999999999999999999999
Q ss_pred HHHhCCcceeEEEEecCC-CCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHh
Q psy15389 159 SVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 237 (864)
Q Consensus 159 ~deyp~~~i~~~~v~P~~-~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~ 237 (864)
+|+||||.+.+++|||.. +.+|++|||||++|+|++|.+.+|+++++||.||.++|.+.+.+++|+|+++|++||++|+
T Consensus 158 ~drypkkliqtysVfPn~d~ssdVVVQpYNsiLtL~rL~~nsD~vVVlDN~AL~ria~~~l~i~~ptF~~iNqLvstims 237 (448)
T KOG1374|consen 158 NDRYPKKLVQTYSVFPNQDESSDVVVQPYNSILTLKRLTENSDCVVVLDNTALHRIAADRLHIQNPTFSQINQLVSTIMS 237 (448)
T ss_pred HHhchhhhheeeeeccCCCCccceEEecchHHHHHHHHhhCCCeEEEeccHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh
Confidence 999999999999999986 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhh--hcccCHHHHHHHhcCCCCceeecCC---CCCc
Q psy15389 238 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAY--HEQLSVAEITNACFEPANQMVKCDP---RHGK 312 (864)
Q Consensus 238 ~~t~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~--~~~~s~~~i~~~~~~~~~~~~~~~~---~~~~ 312 (864)
+.|.++||||+++.++..|...|+|+|++||++++|.|+++.+... ++..++.+.++.++.++++|+...+ .+..
T Consensus 238 ~st~t~r~p~Ym~n~l~~l~~~LiP~P~lhfl~~~~tP~~sd~~~~~~~rkttvldvmRrLL~pkn~mvs~~~~~~~~~~ 317 (448)
T KOG1374|consen 238 ASTTTLRYPGYMNNDLIGLYASLIPTPELHFLMTGYTPLTSDNSLATAVRKTTVLDVMRRLLQPKNMMVSTADDLSGNPC 317 (448)
T ss_pred hccccccchhhccCcHHHHHhhcCCCCCeeeeeccCCcccChhhhhhhhhcchHHHHHHHHhCcchhhhhccccccCCcc
Confidence 9999999999999999999999999999999999999999865443 5888999999999999999998755 3457
Q ss_pred hhhhhhhhcCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHH
Q psy15389 313 YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 392 (864)
Q Consensus 313 ~ls~~~~~RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l 392 (864)
|++...+.-|.+.+..+..++.+++.++..+|+.|.|.++.++.....|...+. ++.|+.+|+|+|++..+|+++
T Consensus 318 ~~si~n~iqg~vdp~~v~~s~~r~~dr~~a~f~~w~~~si~val~k~spy~~~~-----~~vSglml~N~t~i~~lfe~~ 392 (448)
T KOG1374|consen 318 YISILNIIQGEVDPTQVHKSLQRIRDRKLANFIPWGPASIQVALSKKSPYVQRA-----HRVSGLMLANSTSIVSLFERI 392 (448)
T ss_pred hHhHHhhhhcccCHHHHHHHHHHHHhcccccCCCCCCHHHHhhhhcCCCccccc-----cceeeeeeccchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999988877766543 678999999999999999999
Q ss_pred HHHHHHHHhcccceeccccCCCCcc---cHHHHHHHHHHHHHHHHHhcCC
Q psy15389 393 DHKFDLMYAKRAFVHWYVGEGMEEG---EFSEAREDLAALEKDYEEVGMD 439 (864)
Q Consensus 393 ~~~f~~m~~rrAflH~Y~~eGmee~---eF~Ea~~~l~~li~~Y~~~~~~ 439 (864)
+.|||||++||||||+|.++||+++ ||.|+++.+++|+++|..+.+.
T Consensus 393 ~~qydklrk~~AFld~y~k~~if~~~~~efdesr~ivq~lv~eY~a~~~~ 442 (448)
T KOG1374|consen 393 LGQYDKLRKKRAFLDQYRKFDIFEDDLDEFDESREIVQQLVDEYHAAEQP 442 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHhhcCc
Confidence 9999999999999999999999998 9999999999999999998653
No 13
>PLN00221 tubulin alpha chain; Provisional
Probab=100.00 E-value=3.2e-93 Score=811.19 Aligned_cols=369 Identities=87% Similarity=1.422 Sum_probs=350.7
Q ss_pred ceeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccc
Q psy15389 493 SRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 572 (864)
Q Consensus 493 ~rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~ 572 (864)
|||||+|||||||||||.+||+++|+||+|+++|...........++++++||+|+.+++|+|||||||+||++|++++.
T Consensus 1 m~EiItiqvGQcGnQIG~~fW~~l~~Eh~i~~~g~~~~~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~e~~~i~~i~~ 80 (450)
T PLN00221 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (450)
T ss_pred CCeEEEEeCCchHHHHHHHHHHHHHHHhCcCCCCCccCCccccccchhhhhheeccCCcccccchhcCCCChhhhhhhcc
Confidence 79999999999999999999999999999999997653332222346789999999999999999999999999999999
Q ss_pred ccccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhh
Q psy15389 573 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 652 (864)
Q Consensus 573 ~~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~de 652 (864)
++++++|+|++++.+++|||||||+|||+.|+++.|+++|+|||++|+||++|||+++||+|||||||+||+|+|+|+|+
T Consensus 81 ~~~~~lf~~~~~i~~~~gagNnwa~Gy~~~g~~~~~~i~d~ir~~~E~cD~l~gf~i~~Sl~GGtGSGlgs~~le~l~d~ 160 (450)
T PLN00221 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (450)
T ss_pred CccccccCccceeccCCCccccccccccchhHHHHHHHHHHHHHHHHhccCccceeEeeccCCCccchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccc
Q psy15389 653 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 732 (864)
Q Consensus 653 yp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~ 732 (864)
||++.+.+++|+|++..++++|||||++|+|++|.+++|++++|||++|+++|.+.++++.|+|++||++||++|+++|+
T Consensus 161 y~~~~~~~~~v~P~~~~~~~vv~~YN~~Lsl~~l~e~~d~~~~~dN~al~~~~~~~~~~~~p~~~dlN~lIa~~is~~T~ 240 (450)
T PLN00221 161 YGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240 (450)
T ss_pred cccccceeeEeeCCCcCCCCchhhhHHHHhHHHHHhhCceeeecchHHHHHHHHhhcCCCCCCHHHHHHHHhhhcccccc
Confidence 99999999999999877899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCcccccccccc
Q psy15389 733 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 812 (864)
Q Consensus 733 ~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 812 (864)
++||||.++.||+++++|||||||+|||+++++|+++..+..+++++|.+|++++|+++++|++++|+.|+|||+++++|
T Consensus 241 s~RF~g~ln~dl~~l~~nLvP~P~lhfl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~~~l~~~~~~~~kyla~~~~~R 320 (450)
T PLN00221 241 SLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYR 320 (450)
T ss_pred cccccccccCCHHHHHHhcCCCCCceeeccccCccccccccccccCCHHHHHHHHhcccceeeecCCCcchHHHHHHHHc
Confidence 99999999999999999999999999999999999987777778899999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCCCCCCc
Q psy15389 813 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 861 (864)
Q Consensus 813 G~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~~~~~~ 861 (864)
|++.++++.+++.+++.|+++.|++|+|+++|+++|.++|..+|.+.++
T Consensus 321 G~~~~~~v~~~~~~~~~~~~~~f~~W~p~~~~~~i~~~~~~~~~~~~~~ 369 (450)
T PLN00221 321 GDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA 369 (450)
T ss_pred CCCCHHHHHHHHHHHHhcCCccccccCCCCEeeeecCCCCccCCCcccc
Confidence 9999999999999999999999999999999999999999877765543
No 14
>PTZ00335 tubulin alpha chain; Provisional
Probab=100.00 E-value=6.6e-92 Score=800.04 Aligned_cols=369 Identities=87% Similarity=1.403 Sum_probs=350.5
Q ss_pred ceeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccc
Q psy15389 493 SRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 572 (864)
Q Consensus 493 ~rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~ 572 (864)
|||||+||+||||||||.+||+++|+||+++++|....+......++.+++||+|+.+++|+|||||||+||++|++++.
T Consensus 1 M~EiI~iqiGqcGnqiG~~fW~~~~~Eh~i~~~g~~~~~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~e~~~i~~i~~ 80 (448)
T PTZ00335 1 MREVISIHIGQAGIQVGNACWELFCLEHGIQPDGQMPSDKNIGVEDDAFNTFFSETGAGKHVPRCVFLDLEPTVIDEVRT 80 (448)
T ss_pred CCcEEEEeCCccHHHHHHHHHHHHHHHhCcCCCCCccCCCcccccchhhcceeEEcCCCccccccccccCCcchhhhccc
Confidence 79999999999999999999999999999999997653332112346789999999999999999999999999999999
Q ss_pred ccccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhh
Q psy15389 573 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 652 (864)
Q Consensus 573 ~~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~de 652 (864)
++++++|+|++++.+++|||||||+|||..|+++.|+++|+|||++|+||++|||+++||+|||||||+||+|+|+|+|+
T Consensus 81 ~~~~~l~~~~~~i~~~~gagnnwa~Gy~~~G~~~~d~i~d~ir~~~E~cD~l~gf~i~~Sl~GGTGSGlgs~l~e~l~d~ 160 (448)
T PTZ00335 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVD 160 (448)
T ss_pred CccccccCchheeecCCCCCCcccccccchhhhHhHHHHHHHHHhHHhccCccceeEeeccCCCccchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccc
Q psy15389 653 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 732 (864)
Q Consensus 653 yp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~ 732 (864)
||++.+++++|+|+.+.++++|+|||++|+|++|.+++|+++++||++|+++|.+.++++.|+|+++|++||++|+++|+
T Consensus 161 yp~~~~~~~~v~P~~~~~~~~v~~YN~~Lsl~~L~e~~d~~~~~dN~al~~i~~~~~~~~~~~~~~~N~~Ia~~is~~t~ 240 (448)
T PTZ00335 161 YGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTA 240 (448)
T ss_pred ccccceeeEEecCCCCCCCcceeehHHHHhHHHHHhhCCeeeeechHHHHHHHHHhcCCCCCCHHHHHHHHHhhhccccc
Confidence 99999999999999877899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCcccccccccc
Q psy15389 733 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 812 (864)
Q Consensus 733 ~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 812 (864)
++||||.++.|+++|++||||||++||++++++|+++..+..+++++|.+|++++|+++|+|+.++|+.|+|||+++++|
T Consensus 241 ~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~n~~~~~~~~~~~~ls~~~~~R 320 (448)
T PTZ00335 241 SLRFDGALNVDLTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACCLMYR 320 (448)
T ss_pred ccccccccCCCHHHHhccccCCCCceecccccCcccccccccccCCCHHHHHHHhcCccceeEecCCCccchHHHHHHHc
Confidence 99999999999999999999999999999999999987777778899999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCCCCCCc
Q psy15389 813 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 861 (864)
Q Consensus 813 G~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~~~~~~ 861 (864)
|++.++++.+++.++++|+.++|++|+|+++|+++|+++|..+|.+.++
T Consensus 321 G~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~~~~~ 369 (448)
T PTZ00335 321 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA 369 (448)
T ss_pred CCCCHHHHHHHHHHHHhhCCCcCCccCCCCEeeeecCCCCccCCCcccc
Confidence 9999999999999999999999999999999999999999877765443
No 15
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=100.00 E-value=4.1e-91 Score=780.45 Aligned_cols=379 Identities=35% Similarity=0.705 Sum_probs=363.1
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
||||+||+||||||||.+||+++++|| |+||+|+||+||++|++++.+
T Consensus 1 ~Eii~i~~GqcGnqig~~~w~~~~~eh--------------------------------~~pR~v~iD~e~~~i~~i~~~ 48 (379)
T cd02190 1 REIIVVQVGQCGNQIGCRFWDLALREH--------------------------------LKARAVLIDMEEGVVNEILKG 48 (379)
T ss_pred CceEEEecCcHHHHHHHHHHHHHHHhh--------------------------------cCCcceeccCChhHHHHHhcC
Confidence 799999999999999999999999998 689999999999999999999
Q ss_pred cccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+++++|+|++++.+++|+||||| +||+..|+++.|+++|+||+++|+||++|||+++||+|||||||+|++|+|+|+|
T Consensus 49 ~~~~~~~~~~~~~~~~gaGnn~a--~G~~~~g~~~~~~~~d~ir~~~E~cd~l~gf~i~~sl~GGTGSG~gs~l~e~l~~ 126 (379)
T cd02190 49 PLRDLFDETQLVTDVSGAGNNWA--VGYHQYGHQYIDSILEKIRKAAEKCDSLQSFFILHSLGGGTGSGLGTYVLELLAD 126 (379)
T ss_pred ccccccCcccccccCCCCCCCcc--ceeeccchhHHHHHHHHHHHHHhhCcCcceEEEEeecCCCcchhHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
+||++.+++++|+|+.. ++++++|||++|+|++|.+++|+++++||++|. +|+++|++||++|+++|
T Consensus 127 ~y~~~~~~~~~v~P~~~-~~~~v~~yN~~lsl~~l~~~~d~~i~~~N~~l~------------~~~~~N~~ia~~i~~~t 193 (379)
T cd02190 127 EFPEVYRFVTSVYPSAD-DDVITSPYNSVLALRELIEHADCVLPIENQALV------------PFDAMNSIVANLLLNLT 193 (379)
T ss_pred hcCccceEEEeecCCCC-CCceecccHHHHHHHHHHHhCCeeEEeccHHHH------------HHHHHHHHHHhhhcCcc
Confidence 99999999999999985 888999999999999999999999999999998 69999999999999999
Q ss_pred cccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhh
Q psy15389 241 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 320 (864)
Q Consensus 241 ~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 320 (864)
+++||||.+|.|++++.+||||||++||++++++|+++..+..++..++.+|++++|++.++|+.+++..++|+++++++
T Consensus 194 ~~~rf~g~~n~d~~~i~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~~~m~~~~~~~~kyls~~~i~ 273 (379)
T cd02190 194 SSMRFEGSLNVDLNEITMNLVPFPRLHFLVSSLSPLYPLADVNVPPRRLDQMFSDAFSRNHQLIRADPKHGLYLACALLV 273 (379)
T ss_pred ceeecccccccchhhhccccccCCCceecccccccccchhhccccCCCHHHHHHHHHccccceeecCCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999998766667889999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHH
Q psy15389 321 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 400 (864)
Q Consensus 321 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~ 400 (864)
||+..+.++.+.+.+++.+ ..|++|+|+++++++|.++|.. .++++++++|+|+|..+|+++.++|++||
T Consensus 274 RG~~~~~ei~~~~~~l~~~--~~fv~W~p~~~~~~~~~~~~~~--------~~~s~~~lsNsTsI~~~f~~i~~~f~~mf 343 (379)
T cd02190 274 RGNVSVSDLRRNIERLKPK--LKFVKWNQEGWKIGLCSVPPVG--------HSYSLLCLANNTCIKGTFTELKERFMKLY 343 (379)
T ss_pred cCCCCHHHHHHHHHHHhcc--CcCcCcCCCcEEEeecccCCCC--------cceeEEEecCccHHHHHHHHHHHHHHHHH
Confidence 9999999999888877665 6799999999999999887642 35789999999999999999999999999
Q ss_pred hcccceeccccCCCCcccHHHHHHHHHHHHHHHHHh
Q psy15389 401 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 436 (864)
Q Consensus 401 ~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~ 436 (864)
+||||||||+++||||+||.||+++|++|+++|+++
T Consensus 344 ~krAflh~Y~~eG~ee~ef~ea~~~l~~li~~Y~~l 379 (379)
T cd02190 344 KRKAHLHHYTQVGMEQGDFTEALESISNLIDEYDYL 379 (379)
T ss_pred hcccchhhhhCCCCcHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999874
No 16
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=100.00 E-value=4.1e-91 Score=795.87 Aligned_cols=412 Identities=24% Similarity=0.438 Sum_probs=378.8
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecccc
Q psy15389 3 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 82 (864)
Q Consensus 3 iitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~~ 82 (864)
||+||+||||||||.+||+++++||+++++|... ..++.+++||+|..+++|+||||+|||||++|++++.+..
T Consensus 2 iItiqvGQCGNQIG~~fw~~l~~Eh~~~~~g~~~------~~~~~~~~ff~e~~~~~~~pRav~iD~ep~vi~~i~~~~~ 75 (446)
T cd02189 2 VVTVQLGQCGNQLGHELFDTLAKEASSSDDEGYK------YERDAQERFFSEKSDGQPIARSVLVDMEPKVIESTLSKSS 75 (446)
T ss_pred eEEEEcCcchhHHHHHHHHHHHHHhCCCCCCCcc------ccccccceeecccCCCCcCCceeecCCCchHHHHhhcCCC
Confidence 8999999999999999999999999998877542 1246779999999999999999999999999999998764
Q ss_pred --cccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 83 --RQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 83 --~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+++|+|++++.+++|+||||| +|||..|+++.|+++|+|||++|+||++|||+++||+|||||||+|++|+|+|+|
T Consensus 76 ~~~~~f~~~~~~~~~~gagnnwa--~Gy~~~g~~~~~~~~d~ir~~~E~cd~~~gf~~~~sl~GGtGSG~gs~l~e~l~d 153 (446)
T cd02189 76 GGTWKYDKKNVICQQSGSGNNWA--YGYYVHGPQIKEDILDLIRKEVEKCDSFEGFLVLHSLAGGTGSGLGSRVTELLRD 153 (446)
T ss_pred CcccccCchheeecCCCCccchh--ccccccchhhHHHHHHHHHHHHHhCCCccceEEEecCCCCcchHHHHHHHHHHHH
Confidence 368999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
+||++.+++++|+|+. .+|+++||||++|+|++|.+++|+++++||++|+++|.+.++++.++|+++|++||++|+++|
T Consensus 154 ~y~~~~~~~~~v~P~~-~~~~~v~~yN~~lsl~~l~e~~d~~~~~dN~al~~~~~~~~~~~~~~~~~~N~~Ia~~l~~~~ 232 (446)
T cd02189 154 EYPESLLLNIVVWPYT-TGEVIVQNYNTVLTLAHLYESSDAIILLENDDIHRICSKLRNLKNVSLSDINKVIAHQLASLL 232 (446)
T ss_pred hcCccceeeeeccCCC-CCcchhhhhhHHhhHHHHHhhCCeEEEecHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999986 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-C-------CCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhc---CCCCceee----
Q psy15389 241 ASLRF-D-------GALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACF---EPANQMVK---- 305 (864)
Q Consensus 241 ~~~rf-~-------g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~---~~~~~~~~---- 305 (864)
+|.|| + |.++.|+.+|.++|||||++||++++++|+++..+..++..++.+|++.++ .+.+.+..
T Consensus 233 ~~~r~~~~~~~~~~~~~~~~l~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~~~~~l~~~l~qm~~~~~~~~~~~~~ 312 (446)
T cd02189 233 QPSLDSTGSNGALAGRSTNPLNDLVEDLCPHPAYKLLTIRSLPQMPEKSLAFSTFSWSALLKRLHQMLIAGSFMEEGIDW 312 (446)
T ss_pred hHhhccCcccccccccccCCHHHHHhhCcCCCCceeeecccCCcccccccccccCCHHHHHHHHHHhhcccccccccccc
Confidence 99987 5 346999999999999999999999999999987766778899999998865 56665554
Q ss_pred ---------------cCCCCCchhhhhhhhcCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcc
Q psy15389 306 ---------------CDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 370 (864)
Q Consensus 306 ---------------~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~ 370 (864)
++++.++|+++++++||+...+++...+ ++.+.|++|+|+++++++|..+|...
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~~~~~~~~~~~-----~~~~~f~~W~p~~~~~~~~~~~~~~~------ 381 (446)
T cd02189 313 TVRPEGSAASLLSGNKSTHFNKSLANLLILRGKDVTSADERKF-----RDPLLYVNWSPSPVRFSISSHKRSFS------ 381 (446)
T ss_pred ccccccccccccccccCCcccceeeeeeeeeCCCchHHHHHHH-----hccCcCCCcCCCCEeeeecCCCCCcC------
Confidence 4567899999999999998877776543 36688999999999999998776421
Q ss_pred cccceEEEeeccHHHHHHHHHHHHHHHHHHhcccceeccccCCCCcccHHHHHHHHHHHHHHHH
Q psy15389 371 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 434 (864)
Q Consensus 371 ~~~~s~~~lsNst~i~~~l~~l~~~f~~m~~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~ 434 (864)
+.++++++++|+|+|..+|++++++|++||+||||||||+++||||+||.||+++|++|+++|+
T Consensus 382 ~~~~s~~~l~Nst~i~~~l~~i~~~f~~mf~~rAflH~Y~~~Gmee~ef~eA~~~l~~li~~Y~ 445 (446)
T cd02189 382 KYEKSVTLVSNSQTIIDPLDNILEKAWNMFASGAYLHQYEKYGLEEEDFLDAFATLEQIIASYK 445 (446)
T ss_pred CcceeEEEEeCCchHHHHHHHHHHHHHHHHhcCcchhhhhccCCcHHHHHHHHHHHHHHHHHhc
Confidence 2468999999999999999999999999999999999999999999999999999999999996
No 17
>PLN00222 tubulin gamma chain; Provisional
Probab=100.00 E-value=1.6e-89 Score=780.71 Aligned_cols=360 Identities=33% Similarity=0.641 Sum_probs=339.2
Q ss_pred cceeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeecccc
Q psy15389 492 DSRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVR 571 (864)
Q Consensus 492 ~~rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~ 571 (864)
||||||+|||||||||||.+||+++|+||+++++|....+.. ..++.+++||+|.++++|+|||||||+||++|++++
T Consensus 1 Mm~EiI~i~vGQcGnqiG~~~w~~l~~Eh~i~~~g~~~~~~~--~~~~~~~~fF~e~~~~~~~pRav~iD~e~~vi~~i~ 78 (454)
T PLN00222 1 MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFAT--QGGDRKDVFFYQADDEHYIPRALLIDLEPRVINGIQ 78 (454)
T ss_pred CCccEEEEecCchHHHHHHHHHHHHHHHhCCCCCCCccCccc--cccccccceeEEcCCCcccceeeecCCCcchhhhhc
Confidence 589999999999999999999999999999999987743322 124678999999999999999999999999999999
Q ss_pred cccccccCCCcceeeccc--cCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHH
Q psy15389 572 TGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERL 649 (864)
Q Consensus 572 ~~~~~~lf~~~~~~~~~~--gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L 649 (864)
.++++++|+|++++++++ |+|||||+||+ .|+++.|+++|+||+++|.||++|||+++||+|||||||+|++|+|+|
T Consensus 79 ~~~~~~lf~~~~~~~~~~~~gagnn~a~Gy~-~g~~~~d~i~d~ir~~~E~cd~l~gf~i~~sl~GGTGSGlgs~lle~L 157 (454)
T PLN00222 79 NSEYRNLYNHENIFVSDHGGGAGNNWASGYH-QGEQVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEAL 157 (454)
T ss_pred cCccccccCccceeecccCCCcccchHHhHH-HHHHHHHHHHHHHHHHHHhCCCccceEEeecCCCCccchHHHHHHHHH
Confidence 999999999999999996 69999999955 799999999999999999999999999999999999999999999999
Q ss_pred HhhhCCcceEEEEEecCCC-CCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhh
Q psy15389 650 SVDYGKKSKLEFAIYPAPQ-VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 728 (864)
Q Consensus 650 ~deyp~~~i~~~~v~P~~~-~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is 728 (864)
+|+||++.+++++|+|++. .++++|+|||++|+|++|.+++|+++++||+||+++|.+.+++++|+|++||++||++|+
T Consensus 158 ~d~y~~~~~~~~~v~P~~~~~~~~vv~~YN~~lsl~~l~~~~D~~~~~dN~al~~ic~~~l~i~~p~~~dlN~lIA~~ls 237 (454)
T PLN00222 158 NDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLHLENPTFAQTNSLVSTVMS 237 (454)
T ss_pred HhhcCCcceeeEEecCCCcccCCceeeecHHHHhHHHHHhcCCeeeEecHHHHHHHHHHhcCCCCCCHHHHHHHhccccC
Confidence 9999999999999999863 578999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCccchhhhccCCccCCCccccccccccccccc-cccccccCHHHHHHHhcCCCCCcccccCCC-----C
Q psy15389 729 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE-KAYHEQLSVAEITNACFEPANQMVKCDPRH-----G 802 (864)
Q Consensus 729 ~~t~~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~-~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~-----~ 802 (864)
++|+++||||.+|+||++|++||||||++||++++++|+.... ...++..++.++++++|+++|+|+.+||+. |
T Consensus 238 ~~T~s~Rfpg~ln~dl~~l~~nLvP~P~lhfl~~s~~P~~~~~~~~~~~~~s~~~~~~~l~~~~n~~~~~~~~~~~~~~~ 317 (454)
T PLN00222 238 ASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQA 317 (454)
T ss_pred CcccccCCCCccCCCHHHHhhhcCCCCCceeeccccccccccccccceeeCCHHHHHHHHhcccCceeecCCcccccccc
Confidence 9999999999999999999999999999999999999997652 344677899999999999999999999887 9
Q ss_pred ccccccccccccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCC
Q psy15389 803 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 854 (864)
Q Consensus 803 ~~ls~~~~~RG~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~ 854 (864)
+|||+++++||++.++|+.+++.++|.+++++|++|+|+++|+++|+++|..
T Consensus 318 k~la~~~~~RG~~~~~~v~~~~~~~~~~~~~~fv~W~p~~~k~~~~~~~~~~ 369 (454)
T PLN00222 318 KYISILNIIQGEVDPTQVHKSLQRIRERKLANFIEWGPASIQVALSRKSPYV 369 (454)
T ss_pred chHHHHHHHhCCCCHHHHHHHHHHHhhhCCccccccCCCCEeeeeccCCCCC
Confidence 9999999999999999999999999999999999999999999999998864
No 18
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=100.00 E-value=1.8e-89 Score=776.49 Aligned_cols=360 Identities=36% Similarity=0.694 Sum_probs=341.5
Q ss_pred eeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeecccccc
Q psy15389 494 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 573 (864)
Q Consensus 494 rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~ 573 (864)
||||+||+||||||||.+||+++|+||+++++|..+.+.. ..++.+++||+|+++++|+||||+||+||++|++++.+
T Consensus 1 ~EiI~i~iGQcGnqIG~~~We~l~~eh~~~~~g~~~~~~~--~~~~~~~~fF~e~~~~~~~pRav~iD~Ep~vi~~i~~~ 78 (431)
T cd02188 1 REIITLQVGQCGNQIGSEFWKQLCAEHGISPDGILEDFAT--DGGDRKDVFFYQADDEHYVPRAILIDLEPRVINSIQNS 78 (431)
T ss_pred CcEEEEEcCchHhHHHHHHHHHHHHHhCCCCCCCcCCCcc--ccccccceeEEECCCCccCCcceeccCCcchhhhhhcC
Confidence 7999999999999999999999999999999987654321 13567899999999999999999999999999999999
Q ss_pred cccccCCCcceeeccc--cCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHh
Q psy15389 574 TYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 651 (864)
Q Consensus 574 ~~~~lf~~~~~~~~~~--gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~d 651 (864)
+++++|+|++++.+++ |+|||||+||+ .|+++.|+++|+||+++|+||++|||+++||+|||||||+|++|+|+|+|
T Consensus 79 ~~~~lf~~~~~~~~~~~~gagnnwa~Gy~-~g~~~~d~i~d~ir~~~E~cd~l~gf~i~~SlgGGTGSG~gs~l~e~L~d 157 (431)
T cd02188 79 EYRNLYNPENIFLSKHGGGAGNNWASGYS-QGEEVQEEILDIIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLND 157 (431)
T ss_pred ccccccCccceEeeccCCCccccHHHHHH-HHHHHHHHHHHHHHHHHhcCCCcceeEEEecCCCCcchhHHHHHHHHHHh
Confidence 9999999999999998 99999999955 69999999999999999999999999999999999999999999999999
Q ss_pred hhCCcceEEEEEecCCCC-CCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcc
Q psy15389 652 DYGKKSKLEFAIYPAPQV-STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 730 (864)
Q Consensus 652 eyp~~~i~~~~v~P~~~~-~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~ 730 (864)
+||++.+++++|+|++.. ++++|||||++|+|++|.+++|++++|||++|+++|.+.++++.|+|.++|++||++|+++
T Consensus 158 ~y~~~~~~~~~V~P~~~~~s~~~v~~YN~~lsl~~l~e~~d~~~~~dN~al~~i~~~~l~~~~~~~~~~N~~ia~~ls~~ 237 (431)
T cd02188 158 RYPKKLIQTYSVFPNQDESSDVVVQPYNSILTLKRLILNADCVVVLDNTALNRIATDRLHIQNPTFDQINSLVSTVMSAS 237 (431)
T ss_pred HcCcceeeeEEecCCCccCCCccceecHHHHHHHHHHHhCCeeeecchHHHHHHHHHhcCCCCCCHHHHHHHHhccCCCc
Confidence 999999999999998764 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCccchhhhccCCccCCCccccccccccccccc-cccccccCHHHHHHHhcCCCCCcccccC-CCCcccccc
Q psy15389 731 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE-KAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMACC 808 (864)
Q Consensus 731 t~~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~-~~~~~~~~~~~l~~~~~~~~n~~~~~~~-~~~~~ls~~ 808 (864)
|+++||||.+|.|+++|++||||||++||++++++|+++.. +..+++++|.+|++.+|+++|+|++++| +.|+||||+
T Consensus 238 t~~~Rf~g~ln~dl~~i~tnLvP~P~lhfl~~s~~P~~~~~~~~~~~~~s~~~l~~~l~~~~n~m~~~~~~~~~k~la~~ 317 (431)
T cd02188 238 TTTLRYPGYMNNDLISLIASLIPTPRLHFLMTSYTPLTSDQIAASVRKTTVLDVMRRLLQPKNIMVSTATRKNGCYISIL 317 (431)
T ss_pred ccceecCCccCCCHHHHHHhcCCCCCceeeccccCccccchhhcceecCCHHHHHHHHhccccceeecCCCccchhHHHH
Confidence 99999999999999999999999999999999999999876 5667889999999999999999999999 899999999
Q ss_pred ccccccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCC
Q psy15389 809 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 856 (864)
Q Consensus 809 ~~~RG~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~ 856 (864)
+++||++.++++.+++.++|.++.++|++|+|+++|+++|+++|...+
T Consensus 318 ~~~RG~~~~~~~~~~~~~lk~~~~~~f~~W~p~~~~~~~~~~~~~~~~ 365 (431)
T cd02188 318 NIIQGEVDPTQVHKSLQRIRERRLANFIPWGPASIQVALSKKSPYVPT 365 (431)
T ss_pred HHHcCCCCHHHHHHHHHHHHhhccccCcccCCCCEEEEEeccCCccCC
Confidence 999999999999999999999988999999999999999999987544
No 19
>PTZ00010 tubulin beta chain; Provisional
Probab=100.00 E-value=7.7e-89 Score=776.09 Aligned_cols=364 Identities=43% Similarity=0.812 Sum_probs=346.8
Q ss_pred ceeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccc
Q psy15389 493 SRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 572 (864)
Q Consensus 493 ~rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~ 572 (864)
|||||+||+||||||||.+||+++++||+++++|........ ..+++++||+|+++|+|+||||+||+||++|++++.
T Consensus 1 M~Eii~i~vGqcGnqiG~~~we~l~~eh~~~~~g~~~~~~~~--~~~~~~~ff~e~~~~~~~pRav~iD~e~~vi~~i~~ 78 (445)
T PTZ00010 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPTGTYQGDSDL--QLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRA 78 (445)
T ss_pred CCcEEEEeccchHhHHHHHHHHHHHHHhCCCCCCCCCCCCcc--cccccceeecccCCCceEEeeeeccCChhhhhhhcc
Confidence 899999999999999999999999999999999876433221 235678999999999999999999999999999999
Q ss_pred ccccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhh
Q psy15389 573 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 652 (864)
Q Consensus 573 ~~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~de 652 (864)
++++.+|+|++++++++|+|||||+|||+.|+++.++++|+|||++|+||++|||+++||+|||||||+|++|+|+|+|+
T Consensus 79 ~~~~~lf~~~~~~~~~~gagNnwa~G~~~~g~~~~~~i~d~irk~~E~cd~l~gf~i~~Sl~GGTGSGlgs~l~e~L~de 158 (445)
T PTZ00010 79 GPYGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKLREE 158 (445)
T ss_pred cchhhhcCccceeecccCCccccccchhhhhHHHHHHHHHHHhhhhhhccCccceEEEeccCCCccccHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccc
Q psy15389 653 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 732 (864)
Q Consensus 653 yp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~ 732 (864)
||++.+.+++|||++..++++|||||++|++++|.+++|++++|||++|+++|.++++++.|+|.+||++||++|+++|+
T Consensus 159 y~~~~~~~~~v~P~~~~~~~~v~~YN~~lsl~~l~~~~d~~i~~dN~al~~i~~~~l~~~~p~~~~lN~lIaq~is~~t~ 238 (445)
T PTZ00010 159 YPDRIMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADESMCIDNEALYDICFRTLKLTTPTYGDLNHLVSAVMSGVTC 238 (445)
T ss_pred CCccceeeeEecCCcccCccchhhhHHHHhHHHHHhcCCceeeeccHHHHHHHHHhccCCCCCHHHHHHHHHhhcccccc
Confidence 99999999999999877899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCcccccccccc
Q psy15389 733 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 812 (864)
Q Consensus 733 ~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 812 (864)
++||||.+|.|+++|++||||||++||++++++|+++..+..+++++|.+|++++|+++|+|+++||++|+|||+++++|
T Consensus 239 ~~Rfpg~ln~dl~~l~tnLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~n~~~~~~~~~~k~la~~~~~R 318 (445)
T PTZ00010 239 CLRFPGQLNSDLRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRGLSVPELTQQMFDAKNMMCAADPRHGRYLTASALFR 318 (445)
T ss_pred ceecCCcccccHHHHHHHHhcCCCceeeecccCccccccccccccCCHHHHHHhHhcccceEeecCCCcchhHHHHHHHc
Confidence 99999999999999999999999999999999999987767778899999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCCCC
Q psy15389 813 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 858 (864)
Q Consensus 813 G~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~~~ 858 (864)
|++.++++.+++.+++.|++++|++|+|++||+++|.++|...+.+
T Consensus 319 G~~~~~~~~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~s 364 (445)
T PTZ00010 319 GRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMS 364 (445)
T ss_pred CCCCHHHHHHHHHHHHhhCCccCccccCCCEEEeecCcCCcCccce
Confidence 9999999999999999999999999999999999999998755443
No 20
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=100.00 E-value=1.2e-88 Score=773.04 Aligned_cols=368 Identities=93% Similarity=1.501 Sum_probs=349.2
Q ss_pred eeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeecccccc
Q psy15389 494 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 573 (864)
Q Consensus 494 rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~ 573 (864)
||||+||+||||||||.+||+++++||+++++|........+..++.+++||+|+.+++|+||||+||+||++|++++.+
T Consensus 1 ~EiI~i~iGqcGnqiG~~~w~~l~~Eh~~~~~g~~~~~~~~~~~~~~~~~ff~e~~~~~~~pRav~iD~e~~~i~~i~~~ 80 (434)
T cd02186 1 REVISIHIGQAGIQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGSGKHVPRAVFIDLEPTVIDEVRTG 80 (434)
T ss_pred CceEEEeCCchHhHHHHHHHHHHHHHhCcCCCCCccCCccccccccccceEEEECCCCcCcccccccCCcHHHHHhhccC
Confidence 79999999999999999999999999999999976543322223567899999999999999999999999999999998
Q ss_pred cccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhh
Q psy15389 574 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 653 (864)
Q Consensus 574 ~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~dey 653 (864)
+++.+|++++++.+++|+|||||+|||+.|+++.|+++|+|||++|+||++|||+++||+|||||||+|++|+|+|+|+|
T Consensus 81 ~~~~l~~~~~~~~~~~g~gnnwa~Gy~~~G~~~~~~i~d~ir~~~E~cD~l~gf~i~~sl~GGTGSGlgs~l~e~l~d~y 160 (434)
T cd02186 81 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIIDLVLDRIRKLADNCTGLQGFLIFHSFGGGTGSGFGSLLLERLSVDY 160 (434)
T ss_pred ccccccCccceeecCCCCCcccccccchhHHHHHHHHHHHHHHHHhcCCCcceeEEEeccCCCcchhHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhccccc
Q psy15389 654 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 733 (864)
Q Consensus 654 p~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~ 733 (864)
|++++++++|+|+...++++|+|||++|+|++|.+++|++++|||++|+++|.+.++++.|+|++||++||++|+++|++
T Consensus 161 ~~~~~~~~~v~P~~~~~~~~v~~YN~~lsl~~l~e~~d~~~~~dN~al~~~~~~~~~~~~~~~~~lN~iIa~~l~~~t~~ 240 (434)
T cd02186 161 GKKSKLEFTVYPSPQVSTAVVEPYNSVLTTHSLLEHSDCSFMVDNEAIYDICRRNLDIERPTYTNLNRLIAQVVSSITAS 240 (434)
T ss_pred CccceeeEEEeCCCCCCCCeeeehHHHHhHHHHHhhCCeeeeeccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccc
Confidence 99999999999998778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCccccccccccc
Q psy15389 734 LRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 813 (864)
Q Consensus 734 ~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG 813 (864)
+||||.++.|+++|++||||||++||++++++|+++..+..+++++|++|++++|+++|+|+.++|+.|+|||+++++||
T Consensus 241 ~rf~g~~~~~l~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~~~m~~~~~~~~~~la~~~~~RG 320 (434)
T cd02186 241 LRFDGALNVDLNEFQTNLVPYPRIHFPLVSYAPIISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRG 320 (434)
T ss_pred eecCCccCCCHHHHHhhccccccceeeccccCcccchhhccccCCCHHHHHHHHhCccceeeecCCcchhHHHHHHHHcC
Confidence 99999999999999999999999999999999999877677788999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCCCCCCc
Q psy15389 814 DVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 861 (864)
Q Consensus 814 ~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~~~~~~ 861 (864)
++.++++.+++.+++.++.+.|++|+|+++|+++|++||...|.+.++
T Consensus 321 ~~~~~~v~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~~~~~ 368 (434)
T cd02186 321 DVVPKDVNAAVATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 368 (434)
T ss_pred CCCHHHHHHHHHHHHHhCCCcCcccCCCcEeeeecCCCCccCCCcccc
Confidence 999999999999999899999999999999999999999877765443
No 21
>KOG1374|consensus
Probab=100.00 E-value=1.3e-88 Score=712.90 Aligned_cols=365 Identities=35% Similarity=0.663 Sum_probs=343.4
Q ss_pred cceeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeecccc
Q psy15389 492 DSRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVR 571 (864)
Q Consensus 492 ~~rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~ 571 (864)
|||||||||+||||||||.+||+.+|+||||.++|.+.+..+ .+.++.++||+|..++.|+|||||||+||+||+.+.
T Consensus 1 m~~eIiTlQ~GQCGNQiG~efwk~L~~Ehgis~~g~l~d~~~--~~~drKdvFFyqadd~~yipRAvLvDlEPrVIn~~~ 78 (448)
T KOG1374|consen 1 MPREIITLQLGQCGNQIGFEFWKQLCLEHGISPDGILEDFAT--EGADRKDVFFYQADDNHYIPRAVLVDLEPRVINQIL 78 (448)
T ss_pred CCceeEEEeccccccHHHHHHHHHHHHhcCCCcCCcccchhh--hCccccccceeeccCCccccceeeeccchHHHhccc
Confidence 689999999999999999999999999999999999765544 345788999999999999999999999999999999
Q ss_pred cccccccCCCcceeecc--ccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHH
Q psy15389 572 TGTYRQLFHPEQLITGK--EDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERL 649 (864)
Q Consensus 572 ~~~~~~lf~~~~~~~~~--~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L 649 (864)
+++++++|+++|++..+ .|||||||.| |..|+++.|+|+|.|+|++|.||+|+||+++||++||||||+||+|+|+|
T Consensus 79 ~~~~s~l~n~eni~~s~~ggGAGNNWA~G-Y~~G~~~~e~ImdiIdrEad~~DsleGF~l~hSiAGGTGSGlGS~llErL 157 (448)
T KOG1374|consen 79 SSPYSGLYNPENIFLSDHGGGAGNNWASG-YSQGERVQEDIMDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSFLLERL 157 (448)
T ss_pred cchhhcccCccceEEecCCCCcccccccc-cccchhhHHHHHHHHHHhhcCCCcccceeEEEeecCCCCcchHHHHHHHH
Confidence 99999999999998765 4799999999 55699999999999999999999999999999999999999999999999
Q ss_pred HhhhCCcceEEEEEecCCC-CCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhh
Q psy15389 650 SVDYGKKSKLEFAIYPAPQ-VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 728 (864)
Q Consensus 650 ~deyp~~~i~~~~v~P~~~-~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is 728 (864)
+|+||||.+.+++|||... .+|+||||||++|+|++|.+.+|+++++||.||.+||.+.+.+++|+|+++|++||.+|+
T Consensus 158 ~drypkkliqtysVfPn~d~ssdVVVQpYNsiLtL~rL~~nsD~vVVlDN~AL~ria~~~l~i~~ptF~~iNqLvstims 237 (448)
T KOG1374|consen 158 NDRYPKKLVQTYSVFPNQDESSDVVVQPYNSILTLKRLTENSDCVVVLDNTALHRIAADRLHIQNPTFSQINQLVSTIMS 237 (448)
T ss_pred HHhchhhhheeeeeccCCCCccceEEecchHHHHHHHHhhCCCeEEEeccHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999873 589999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCccchhhhccCCccCCCccccccccccccccccccc--cccCHHHHHHHhcCCCCCcccccC-C--CCc
Q psy15389 729 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH--EQLSVAEITNACFEPANQMVKCDP-R--HGK 803 (864)
Q Consensus 729 ~~t~~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~--~~~~~~~l~~~~~~~~n~~~~~~~-~--~~~ 803 (864)
+.|.++||||++++++..|...|||+|++|||+++|+|+++...... ++.++.+.+++++.|+|+|++..+ . +..
T Consensus 238 ~st~t~r~p~Ym~n~l~~l~~~LiP~P~lhfl~~~~tP~~sd~~~~~~~rkttvldvmRrLL~pkn~mvs~~~~~~~~~~ 317 (448)
T KOG1374|consen 238 ASTTTLRYPGYMNNDLIGLYASLIPTPELHFLMTGYTPLTSDNSLATAVRKTTVLDVMRRLLQPKNMMVSTADDLSGNPC 317 (448)
T ss_pred hccccccchhhccCcHHHHHhhcCCCCCeeeeeccCCcccChhhhhhhhhcchHHHHHHHHhCcchhhhhccccccCCcc
Confidence 99999999999999999999999999999999999999998765443 778999999999999999999865 2 347
Q ss_pred cccccccccccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCCCCC
Q psy15389 804 YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD 859 (864)
Q Consensus 804 ~ls~~~~~RG~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~~~~ 859 (864)
|++...+..|.+.+.+|.+++.+++.++..+|++|.|.+++|++.+.+|.+.++..
T Consensus 318 ~~si~n~iqg~vdp~~v~~s~~r~~dr~~a~f~~w~~~si~val~k~spy~~~~~~ 373 (448)
T KOG1374|consen 318 YISILNIIQGEVDPTQVHKSLQRIRDRKLANFIPWGPASIQVALSKKSPYVQRAHR 373 (448)
T ss_pred hHhHHhhhhcccCHHHHHHHHHHHHhcccccCCCCCCHHHHhhhhcCCCccccccc
Confidence 99999999999999999999999999999999999999999999999998877654
No 22
>PTZ00387 epsilon tubulin; Provisional
Probab=100.00 E-value=5.8e-88 Score=767.99 Aligned_cols=355 Identities=33% Similarity=0.649 Sum_probs=333.7
Q ss_pred ceeEEEEecCchhhHHHHHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCccccccccCC-----CC--CcccceeEeCCCC
Q psy15389 493 SRECISIHVGQAGVQIGNACWELYCLEHG-IQPDGQMPSDKTIGGGDDSFNTFFSETG-----AG--KHVPRAVFVDLEP 564 (864)
Q Consensus 493 ~rEiItiqvGqcGnqIG~~fW~~~~~eh~-i~~~g~~~~~~~~~~~~~~~~~~F~e~~-----~~--~~~pRailiD~e~ 564 (864)
|||||+|||||||||||.+||+++|+||+ |+++|.. ++++++||+|.+ .+ +|+||||+||+||
T Consensus 1 m~EiI~iqvGQCGnQIG~~fW~~l~~Eh~~i~~~g~~---------~~~~~~fF~~~~~~~~~~~~~~~~pRav~vD~Ep 71 (465)
T PTZ00387 1 PREIVTVQVGQCGNQLGHRFWDVALKEHKKINANPQY---------DDARDSFFENVSENVNRPGKENLKARAVLVDMEE 71 (465)
T ss_pred CCcEEEEEcCchHHHHHHHHHHHHHHHhCccCCCCcc---------cccccceecccccccccCCCccccCcccccCCCc
Confidence 89999999999999999999999999999 7777754 346689999533 23 4999999999999
Q ss_pred CeecccccccccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHH
Q psy15389 565 TVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSL 644 (864)
Q Consensus 565 ~~i~~i~~~~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~ 644 (864)
++|++++.++++++|++++++++++|+|||||+|||..|+++.|+++|+||+++|+||++|||+++||+|||||||+|++
T Consensus 72 ~vi~~i~~~~~~~~f~~~~~i~~~~GaGNnwa~G~~~~g~~~~d~~~d~Ir~~~E~cD~l~gf~i~~slgGGTGSGlgs~ 151 (465)
T PTZ00387 72 GVLNQILKSPLGDLFDENFFVSDVSGAGNNWAVGHMEYGDKYIDSISESVRRQVEQCDSLQSFFLMHSLGGGTGSGLGTR 151 (465)
T ss_pred cHHHHhhcCCcccccCcccccccCCCCCCCcCCCcccccHHHHHHHHHHHHHHHHhccCcceEEEEeecCCCcchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCC-----------
Q psy15389 645 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER----------- 713 (864)
Q Consensus 645 lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~----------- 713 (864)
|+|+|+|+||++.+++++|||+. .++++++|||++|+|++|.+++|+++++||++|+++|.+.++++.
T Consensus 152 lle~l~d~y~~~~~~~~~V~P~~-~~~~vv~pYN~~lsl~~l~e~~d~~i~~dN~aL~~i~~~~~~~~~~~~~~~~~~~~ 230 (465)
T PTZ00387 152 ILGMLEDEFPHVFRFCPVVFPSA-VDDVITSPYNSFFALRELIEHADCVLPLDNDALANIADSALSRKKKKLAKGNIKRG 230 (465)
T ss_pred HHHHHHHhcccCceeeeEecCCC-CCcceeccchhHHHHHHHHhhCCeEEEeehHHHHHHHHhhcCcccccccccccccc
Confidence 99999999999999999999985 589999999999999999999999999999999999998887764
Q ss_pred ----------------CCcchhhHHHHHHhhccccccccCCCCccchhhhccCCccCCCccccccccccccccccccccc
Q psy15389 714 ----------------PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 777 (864)
Q Consensus 714 ----------------~~~~~~N~~Ia~~is~~t~~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~ 777 (864)
++|+++|++||++|+++|+++||||.+|+|+++|.+||||||++||++++++|+++..+..+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~N~iIa~~l~~~t~~~Rf~g~~n~dl~~i~~nLvP~P~lhFl~~s~~P~~~~~~~~~~~ 310 (465)
T PTZ00387 231 PQPHKYSVAKPTETKKLPYDKMNNIVAQLLSNLTSSMRFEGSLNVDINEITTNLVPYPRLHFLTSSIAPLVSLKDVAVGP 310 (465)
T ss_pred ccccccccccccccccccHHHHHHHHHhhhccccceeecCCccCCCHHHHHhhcCCCCCceeeccccCcccchhhccccc
Confidence 8899999999999999999999999999999999999999999999999999998876677788
Q ss_pred cCHHHHHHHhcCCCCCcccccCCCCccccccccccccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCCC
Q psy15389 778 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 857 (864)
Q Consensus 778 ~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~~ 857 (864)
++|++|++++|+++++|+.++|+.|+||||++++||++.++|+.+++.++|. .++|++|+|+++|+++|+++|...+.
T Consensus 311 ~s~~~l~~~l~~~~~~m~~~~~~~~k~la~~~~~RG~~~~~~v~~~~~~lk~--~~~f~~W~p~~~~~~~~~~~~~~~~~ 388 (465)
T PTZ00387 311 RRLDQMFKDCLDPDHQMVAATPEAGKYLATALIVRGPQNVSDVTRNILRLKE--QLNMIYWNEDGFKTGLCNVSPLGQPY 388 (465)
T ss_pred CCHHHHHHHHhcccCeeeecCCCcchHHHHHHHHcCCCChHHHHHHHHHHhc--cccccccCCCceEEEeeccCCCCCce
Confidence 9999999999999999999999999999999999999999999999998864 48999999999999999999976655
Q ss_pred CC
Q psy15389 858 GD 859 (864)
Q Consensus 858 ~~ 859 (864)
+.
T Consensus 389 s~ 390 (465)
T PTZ00387 389 SL 390 (465)
T ss_pred eE
Confidence 43
No 23
>PLN00220 tubulin beta chain; Provisional
Probab=100.00 E-value=4.1e-87 Score=764.02 Aligned_cols=364 Identities=41% Similarity=0.804 Sum_probs=346.1
Q ss_pred ceeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccc
Q psy15389 493 SRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 572 (864)
Q Consensus 493 ~rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~ 572 (864)
|||||+||+||||||||.+||+++++||+++++|....... ...+.+++||+|.++++|+||||+||+||++|++++.
T Consensus 1 m~Eii~i~iGqcGnqiG~~~w~~l~~eh~~~~~g~~~~~~~--~~~~~~~~~f~e~~~~~~~pRav~iD~e~~~i~~i~~ 78 (447)
T PLN00220 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGTYHGDSD--LQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRS 78 (447)
T ss_pred CCceEEEecCccHhHHHHHHHHHHHHHhCCCCCCCcCCCcc--cccccccceeccCCCCcccceeEecCCcHHHHHHHhc
Confidence 79999999999999999999999999999999887643322 1235778999999999999999999999999999999
Q ss_pred ccccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhh
Q psy15389 573 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 652 (864)
Q Consensus 573 ~~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~de 652 (864)
++++.+|++++++++++|||||||+|||+.|+++.|+++|+|||++|+||++|||+++||+|||||||+|++|+++|+|+
T Consensus 79 ~~~~~~~~~~~~~~~~~gagnnwa~G~~~~g~~~~~~~~d~ir~~~E~cd~l~gf~~~~sl~GGTGSG~gs~l~~~l~~~ 158 (447)
T PLN00220 79 GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158 (447)
T ss_pred CccccccCccceEecccCCCCccCceeecccHHHHHHHHHHHHHHHHhCcCcCceEEEEecCCCccccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccc
Q psy15389 653 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 732 (864)
Q Consensus 653 yp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~ 732 (864)
||++.+++++|+|++..++++++|||++|+|++|.+++|++++|||++|+++|.+.++++.|+|+++|++||+.|+++|+
T Consensus 159 y~~~~~~~~~v~P~~~~~~~~v~~yN~~lsl~~l~~~~d~~i~~dN~aL~~i~~~~~~i~~~sf~~~N~lIa~~is~it~ 238 (447)
T PLN00220 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238 (447)
T ss_pred ccccceeeeEEECCCcCCCCccchhHHHHhHHHHHhcCCceEEeehHHHHHHHHHhhcCCCCChHHHHhHhhccccccch
Confidence 99999999999999877999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCcccccccccc
Q psy15389 733 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 812 (864)
Q Consensus 733 ~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 812 (864)
++||||.++.|+.++++||||||++||++++++|+........++++|.+|++++|+++++|++++|.+|+|||+++++|
T Consensus 239 slRFpG~ln~~l~~l~~nLVP~P~l~Fl~~s~~P~~~~~~~~~~~~t~~~l~~~l~~~~n~l~~~~~~~gk~la~~~~~R 318 (447)
T PLN00220 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 318 (447)
T ss_pred hhccCCcCCccHHHHHHHhCCccceeEeecccCcccccccccccccCHHHHHHHHHhhhhcccccCCCCchhHHHHHHHc
Confidence 99999999999999999999999999999999999887666678899999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCCCC
Q psy15389 813 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 858 (864)
Q Consensus 813 G~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~~~ 858 (864)
|+++++++.+++.+++.|++++|++|+|++||+++|.++|...+.+
T Consensus 319 G~~~~~ev~~~~~~l~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~s 364 (447)
T PLN00220 319 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMA 364 (447)
T ss_pred CCCCHHHHHHHHHHHHhhCCCccccccCCCEEEeecCCCCCCccee
Confidence 9999999999999999999999999999999999999998655443
No 24
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-
Probab=100.00 E-value=7.2e-87 Score=757.43 Aligned_cols=363 Identities=43% Similarity=0.815 Sum_probs=344.3
Q ss_pred eeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeecccccc
Q psy15389 494 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 573 (864)
Q Consensus 494 rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~ 573 (864)
||||+||+||||||||.+||+++|+||+++++|....... ...+.+++||+|.++++|+||||+||+||++|++++.+
T Consensus 1 ~eii~i~vGqcGnqiG~~~w~~l~~eh~~~~~g~~~~~~~--~~~~~~~~fF~e~~~~~~~pRav~iD~e~~~i~~i~~~ 78 (425)
T cd02187 1 REIVHIQAGQCGNQIGAKFWEVISDEHGLDPTGTYKGDSD--LQLERINVYFNEASGGKYVPRAILVDLEPGTMDSVRSG 78 (425)
T ss_pred CceEEEeCCccHhHHHHHHHHHHHHHcCCCCCCCccCCcc--ccccccceeEEecCCCceeeeeeeccCChhhhhhhhcC
Confidence 7999999999999999999999999999999987643322 12357789999999999999999999999999999998
Q ss_pred cccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhh
Q psy15389 574 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 653 (864)
Q Consensus 574 ~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~dey 653 (864)
+++.+|++++++.+++|+|||||+|||+.|+++.|+++|+||+++|+||++|||+++||+|||||||+|++|+|+|+|+|
T Consensus 79 ~~~~l~~~~~~~~~~~gagnnwa~G~~~~G~~~~e~i~d~ir~~~E~cD~l~gf~~~~sl~GGTGSG~gs~l~e~l~d~y 158 (425)
T cd02187 79 PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 158 (425)
T ss_pred cccceecCcceeeccCCCCCccCccchhhcHHHHHHHHHHHHHhhccCCCcceEEEEeecCCCccccHHHHHHHHHHHhc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhccccc
Q psy15389 654 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 733 (864)
Q Consensus 654 p~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~ 733 (864)
|++.+++++|+|+...++++|+|||++|+|++|.+++|++++|||++|+++|.+++++..|+|+++|++||++|+++|++
T Consensus 159 ~~~~~~~~~V~P~~~~~~~~v~~YN~~lsl~~l~~~~d~~i~~dN~al~~i~~~~~~~~~~~~~~~N~~ia~~is~~t~s 238 (425)
T cd02187 159 PDRIMATFSVFPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSAVMSGITTC 238 (425)
T ss_pred CCcceEEEEEecCCCcCcceeeehHHHHHHHHHHhcCCeEEEeecHHHHHHHHHhcCCCCCCHHHHHHHHhcccccccee
Confidence 99999999999998767999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCccccccccccc
Q psy15389 734 LRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 813 (864)
Q Consensus 734 ~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG 813 (864)
+||||.+|.|+++|++||||||++||++++++|+++..+..++++++.+|++++|+++|+|++++|++|+|||+++++||
T Consensus 239 ~Rfpg~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~~~~~~~~~~~~~~la~~~~~RG 318 (425)
T cd02187 239 LRFPGQLNSDLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTAAAIFRG 318 (425)
T ss_pred eecCCccccCHHHHHHhcCCCCCceecccccCccccccccccccCCHHHHHHHHhCccCeeeccCCCcchHHHHHHHHcC
Confidence 99999999999999999999999999999999999876666788999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCCCC
Q psy15389 814 DVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 858 (864)
Q Consensus 814 ~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~~~ 858 (864)
++.++++.+++.+++.++.+.|++|+|+++|+++|+++|...+.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~s 363 (425)
T cd02187 319 RVSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS 363 (425)
T ss_pred CCCHHHHHHHHHHHHHhCCCcCCCcCCCCEeeeecCCCCCCccee
Confidence 999999999999999999999999999999999999988654433
No 25
>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi
Probab=100.00 E-value=1.5e-83 Score=724.39 Aligned_cols=382 Identities=49% Similarity=0.874 Sum_probs=364.0
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeeccc
Q psy15389 2 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 81 (864)
Q Consensus 2 Eiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~ 81 (864)
|||+||+||||||||.+||+++ |+||+||+++++++.++
T Consensus 1 eii~i~vGq~G~qig~~~w~~~-----------------------------------------i~iD~e~~~i~~i~~~~ 39 (382)
T cd06059 1 EIISIQIGQCGNQIGNKFWELL-----------------------------------------ILVDLDPRVINEILQGQ 39 (382)
T ss_pred CeEEEecCCcHHHHHHHHHHHH-----------------------------------------HcccCCcchhhhhhccc
Confidence 8999999999999999999964 99999999999999998
Q ss_pred ccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHH
Q psy15389 82 YRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 161 (864)
Q Consensus 82 ~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~de 161 (864)
.+.+|++++++.+++|+||||+ +||+..|+++.|+++|+||+++|+||++|||+++||+|||||||+|++++|.|+|+
T Consensus 40 ~~~~~~~~~~~~~~~g~gnn~a--~G~~~~g~~~~e~~~d~ir~~~E~cD~l~gf~i~~sl~GGTGSG~gs~l~e~l~d~ 117 (382)
T cd06059 40 LSKLFDPNQLVNGKEGSGNNWA--RGYYTIGPELIDEILDRIRKQVEKCDSLQGFQITHSLGGGTGSGLGSLLLELLSDE 117 (382)
T ss_pred ccccCCcccEEecccccccccc--ccccccCHHHHHHHHHHHHHHHHhCCCcCceEEEEecCCCcchhHHHHHHHHHHHh
Confidence 8889999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhcc
Q psy15389 162 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 241 (864)
Q Consensus 162 yp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~ 241 (864)
||++.+++++|+|+...+++++++||++|+|++|.+++|+++++||++|.++|.+.+.++.++|+++|++||++|+++|.
T Consensus 118 y~~~~i~~~~v~P~~~~~~~~v~~yN~~lsl~~L~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~iia~~l~~it~ 197 (382)
T cd06059 118 YPKILINTFSIFPSPQGSSNVVEPYNSILSLNHLLENSDSVILFDNEALYNILTRQLDIDEPSFDDLNNIIAQIISSITA 197 (382)
T ss_pred cCccceEeEEEeccCccCCccccchHHHHhHHHHHhcCCeeEEeehHHHHHHHHHhcCCCCCChHHHHHHHHHhhccccc
Confidence 99999999999999875568999999999999999999999999999999999999899999999999999999999999
Q ss_pred ccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhhc
Q psy15389 242 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 321 (864)
Q Consensus 242 ~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 321 (864)
++||||.+|.|++++.++|||||++||++++++|+++.....++..++.++++++|++.++++.++++.++|+++++++|
T Consensus 198 ~~r~~g~~n~d~~~i~~~LvP~p~~~fl~~s~~P~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~la~~~~~R 277 (382)
T cd06059 198 SLRFPGYLNFDLRKLATNLVPFPRLHFLTPSFAPLISYDSQTTEKLNLLQIINELFNNDNSFFSCDPTKGRYLAAALIFR 277 (382)
T ss_pred ccccCCCcCCCHHHHhhhcCCCCCceeccccccccccchhcccccCCHHHHHHHHhhcccceeecCCCcchHHHHHHHHh
Confidence 99999999999999999999999999999999999987666678889999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHHh
Q psy15389 322 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 401 (864)
Q Consensus 322 G~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~~ 401 (864)
|+..+.++.+.+.+++.+.... +|+|+++++++|+++|. .+.++++++++|+|+|..+|+++.++|++||+
T Consensus 278 G~~~~~~v~~~~~~~~~~~~~~--~w~p~~~~~~~~~~~~~-------~~~~~s~~~l~Nstsi~~~l~~i~~~f~~m~~ 348 (382)
T cd06059 278 GDVFQSEIQEAINKLKNKLNIQ--SWIPDGFKVSNCKKPPR-------AELGKSALFLSNSTSIGESLERLIEKFDKLYK 348 (382)
T ss_pred CCCCHHHHHHHHHHHHHhcccc--cCCCCcEEEEecCCCCC-------cCcceeEEEecCchHHHHHHHHHHHHHHHHHh
Confidence 9999999999988887776554 89999999999998774 12458899999999999999999999999999
Q ss_pred cccceeccccCCCCcccHHHHHHHHHHHHHHHHH
Q psy15389 402 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 435 (864)
Q Consensus 402 rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~ 435 (864)
||||||||+++||||+||.||+++|++|+++|++
T Consensus 349 ~rAflh~Y~~~G~ee~ef~ea~~~l~~li~~Y~~ 382 (382)
T cd06059 349 RKAFLHWYLGEGMDEMEFTEAESSLEDLIQSYQE 382 (382)
T ss_pred hCcchhhhcCcCCchHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999974
No 26
>KOG1376|consensus
Probab=100.00 E-value=1.3e-84 Score=681.68 Aligned_cols=405 Identities=95% Similarity=1.452 Sum_probs=392.0
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecc
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 80 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~ 80 (864)
||||+||+||+|.|||+++|+++|.||+|+++|..+.++.....++++++||+++..++++||+++||+||. ||+++.|
T Consensus 2 ~e~i~ih~gqag~qi~naCwel~clEhgi~~~g~~p~~~~~~~~~~~~~tff~~t~~~k~~pr~~fVDlEPt-idevrtG 80 (407)
T KOG1376|consen 2 REIISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPDDKSVGKGDDSFNTFFSETGAGKHVPRAVFVDLEPT-IDEVRTG 80 (407)
T ss_pred CcceeeeeccccccccchhHHHHHHHhcCccCCcCCCCccccccCcccceeecccccccccceeEEEeccCc-cchhccc
Confidence 899999999999999999999999999999999998877766667889999999999999999999999999 9999999
Q ss_pred cccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH
Q psy15389 81 TYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV 160 (864)
Q Consensus 81 ~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d 160 (864)
+||.+|+|++++.+|++++||+| +|+|+.|+|.++..+++||+.++.|..||||.++||+|||||||+++.++|.|..
T Consensus 81 ~y~~lfHPeqlitGkedAannyA--rghyt~g~e~id~~~~~Ir~~Ad~C~glqgflvFhs~GGgtGsg~~s~lmerls~ 158 (407)
T KOG1376|consen 81 TYRQLFHPEQLITGKEDAANNYA--RGHYTIGKEIIDLVLDRIRKLADLCTGLQGFLVFHSFGGGTGSGLGSLLMERLSV 158 (407)
T ss_pred chhhccCchhccCcchHhhhhHH--hhhhhcchhhhHHHHHHHHHHHHhhccccceEEEEeccCCCcCCccchhhhhhhh
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhc
Q psy15389 161 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 240 (864)
Q Consensus 161 eyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t 240 (864)
+|+||..+.+++||.+..++.+++|||++|+-+...+++|++++.||++++.+|.+++.++.|+|.++|++|+++++++|
T Consensus 159 ~~GKkskl~fsiypapqvSt~vvePynsiltth~tle~sD~sf~vdnea~Ydicr~~l~i~rPtyt~lnr~i~qVvSsit 238 (407)
T KOG1376|consen 159 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPTYTNLNRLIAQVVSSIT 238 (407)
T ss_pred hhhhccccccccccCccccccccCCccccccceeecccCcceeecCchhhcchhhhccccCCccccchhhhHHhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhh
Q psy15389 241 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 320 (864)
Q Consensus 241 ~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 320 (864)
.++||.|.+|+||.++.+|||||| + ++|+.+..+..+++.+..+|++++|++.++|++|||+.|+|+|+++++
T Consensus 239 aSlrf~g~lnvdl~efqTnlVpyp----l---yap~~s~~~a~he~~sv~~it~~~fe~~~qmvkcDP~~gkyma~clly 311 (407)
T KOG1376|consen 239 ASLRFDGALNVDLTEFQTNLVPYP----L---YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLY 311 (407)
T ss_pred cccccCCcccccHHHHHhhCCCCc----c---cccchhhcccchhhhhHHhhccccccccccccccCCccchHHHHHHhc
Confidence 999999999999999999999999 2 999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHHHHHHHH
Q psy15389 321 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 400 (864)
Q Consensus 321 RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~ 400 (864)
||++.++++..++..+|.+++++|++ ...++.++++.++..|+|+|+|+|+..+.++..+|+.||
T Consensus 312 rgdvvP~~v~~A~a~ikt~rt~qfvd---------------~~v~gg~lakv~Ravcmlsnttai~eawarld~kfdLmy 376 (407)
T KOG1376|consen 312 RGDVVPKDVNAAIATIKTKRTIQFVD---------------TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 376 (407)
T ss_pred cCCcCcccchHHHHhhhhccccccce---------------eeccCcchhhhceeeEecCCCcHHHHHHhhcchhhhhhh
Confidence 99999999999999999999999987 134567788889999999999999999999999999999
Q ss_pred hcccceeccccCCCCcccHHHHHHHHHHHH
Q psy15389 401 AKRAFVHWYVGEGMEEGEFSEAREDLAALE 430 (864)
Q Consensus 401 ~rrAflH~Y~~eGmee~eF~Ea~~~l~~li 430 (864)
.||||+|||.+|||||+||.||+|.|..|.
T Consensus 377 akrafVhwyvgegmeegef~ea~ed~a~le 406 (407)
T KOG1376|consen 377 AKRAFVHWYVGEGMEEGEFSEAREDLAALE 406 (407)
T ss_pred cchheeeeccCCCccccchhhhhhhHHhhc
Confidence 999999999999999999999999998774
No 27
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=100.00 E-value=1.5e-79 Score=700.76 Aligned_cols=347 Identities=24% Similarity=0.453 Sum_probs=321.3
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeecccccccc
Q psy15389 496 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 575 (864)
Q Consensus 496 iItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~~ 575 (864)
||+|||||||||||.+||+++++||+++++|... ..++.+++||+|..+++|+||||+||+||+||++++++..
T Consensus 2 iItiqvGQCGNQIG~~fw~~l~~Eh~~~~~g~~~------~~~~~~~~ff~e~~~~~~~pRav~iD~ep~vi~~i~~~~~ 75 (446)
T cd02189 2 VVTVQLGQCGNQLGHELFDTLAKEASSSDDEGYK------YERDAQERFFSEKSDGQPIARSVLVDMEPKVIESTLSKSS 75 (446)
T ss_pred eEEEEcCcchhHHHHHHHHHHHHHhCCCCCCCcc------ccccccceeecccCCCCcCCceeecCCCchHHHHhhcCCC
Confidence 8999999999999999999999999999887653 1246779999999999999999999999999999998764
Q ss_pred c--ccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhh
Q psy15389 576 R--QLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 653 (864)
Q Consensus 576 ~--~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~dey 653 (864)
+ ++|++++++.+++|+|||||+|||..|+++.|+++|+|||++|+||++|||+++||+|||||||+|++|+|+|+|+|
T Consensus 76 ~~~~~f~~~~~~~~~~gagnnwa~Gy~~~g~~~~~~~~d~ir~~~E~cd~~~gf~~~~sl~GGtGSG~gs~l~e~l~d~y 155 (446)
T cd02189 76 GGTWKYDKKNVICQQSGSGNNWAYGYYVHGPQIKEDILDLIRKEVEKCDSFEGFLVLHSLAGGTGSGLGSRVTELLRDEY 155 (446)
T ss_pred CcccccCchheeecCCCCccchhccccccchhhHHHHHHHHHHHHHhCCCccceEEEecCCCCcchHHHHHHHHHHHHhc
Confidence 4 68999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhccccc
Q psy15389 654 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 733 (864)
Q Consensus 654 p~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~ 733 (864)
|++.+++++|+|+. .+|+++||||++|+|++|.+++|+++++||++|+++|++.++++.|+|+++|++||++|+++|++
T Consensus 156 ~~~~~~~~~v~P~~-~~~~~v~~yN~~lsl~~l~e~~d~~~~~dN~al~~~~~~~~~~~~~~~~~~N~~Ia~~l~~~~~~ 234 (446)
T cd02189 156 PESLLLNIVVWPYT-TGEVIVQNYNTVLTLAHLYESSDAIILLENDDIHRICSKLRNLKNVSLSDINKVIAHQLASLLQP 234 (446)
T ss_pred CccceeeeeccCCC-CCcchhhhhhHHhhHHHHHhhCCeEEEecHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhH
Confidence 99999999999986 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-C-------CCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhc---CCCCCccc------
Q psy15389 734 LRF-D-------GALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACF---EPANQMVK------ 796 (864)
Q Consensus 734 ~rf-~-------g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~---~~~n~~~~------ 796 (864)
+|| | |.++.|+++|.+||||||++||++++++|+++..+..++..+|.+|+++++ .+++.|..
T Consensus 235 ~r~~~~~~~~~~~~~~~~l~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~~~~~l~~~l~qm~~~~~~~~~~~~~~~ 314 (446)
T cd02189 235 SLDSTGSNGALAGRSTNPLNDLVEDLCPHPAYKLLTIRSLPQMPEKSLAFSTFSWSALLKRLHQMLIAGSFMEEGIDWTV 314 (446)
T ss_pred hhccCcccccccccccCCHHHHHhhCcCCCCceeeecccCCcccccccccccCCHHHHHHHHHHhhcccccccccccccc
Confidence 987 6 346999999999999999999999999999987777778899999999977 67777766
Q ss_pred -------------ccCCCCccccccccccccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCC
Q psy15389 797 -------------CDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 854 (864)
Q Consensus 797 -------------~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~ 854 (864)
++++.++||++++++||++..+++...+ ++.+.|++|+|+++++++|.++|..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~~~~~~~~~~~-----~~~~~f~~W~p~~~~~~~~~~~~~~ 380 (446)
T cd02189 315 RPEGSAASLLSGNKSTHFNKSLANLLILRGKDVTSADERKF-----RDPLLYVNWSPSPVRFSISSHKRSF 380 (446)
T ss_pred ccccccccccccccCCcccceeeeeeeeeCCCchHHHHHHH-----hccCcCCCcCCCCEeeeecCCCCCc
Confidence 4577899999999999999888887553 4668999999999999999998863
No 28
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=100.00 E-value=3.2e-79 Score=684.48 Aligned_cols=316 Identities=37% Similarity=0.735 Sum_probs=304.4
Q ss_pred eeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeecccccc
Q psy15389 494 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 573 (864)
Q Consensus 494 rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~ 573 (864)
||||+||+||||||||.+||+++|+|| |+||||+||+||++|++++.+
T Consensus 1 ~Eii~i~~GqcGnqig~~~w~~~~~eh--------------------------------~~pR~v~iD~e~~~i~~i~~~ 48 (379)
T cd02190 1 REIIVVQVGQCGNQIGCRFWDLALREH--------------------------------LKARAVLIDMEEGVVNEILKG 48 (379)
T ss_pred CceEEEecCcHHHHHHHHHHHHHHHhh--------------------------------cCCcceeccCChhHHHHHhcC
Confidence 799999999999999999999999998 589999999999999999999
Q ss_pred cccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhh
Q psy15389 574 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 653 (864)
Q Consensus 574 ~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~dey 653 (864)
+++++|++++++.+++|+|||||+||+..|+++.|+++|+|||++|+||++|||+++||+|||||||+|++|+|.|+|+|
T Consensus 49 ~~~~~~~~~~~~~~~~gaGnn~a~G~~~~g~~~~~~~~d~ir~~~E~cd~l~gf~i~~sl~GGTGSG~gs~l~e~l~~~y 128 (379)
T cd02190 49 PLRDLFDETQLVTDVSGAGNNWAVGYHQYGHQYIDSILEKIRKAAEKCDSLQSFFILHSLGGGTGSGLGTYVLELLADEF 128 (379)
T ss_pred ccccccCcccccccCCCCCCCccceeeccchhHHHHHHHHHHHHHhhCcCcceEEEEeecCCCcchhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhccccc
Q psy15389 654 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 733 (864)
Q Consensus 654 p~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~ 733 (864)
|++.+++++|+|+.. ++++++|||++|+|++|.+++|+++++||++|. +|+++|++||++|+++|++
T Consensus 129 ~~~~~~~~~v~P~~~-~~~~v~~yN~~lsl~~l~~~~d~~i~~~N~~l~------------~~~~~N~~ia~~i~~~t~~ 195 (379)
T cd02190 129 PEVYRFVTSVYPSAD-DDVITSPYNSVLALRELIEHADCVLPIENQALV------------PFDAMNSIVANLLLNLTSS 195 (379)
T ss_pred CccceEEEeecCCCC-CCceecccHHHHHHHHHHHhCCeeEEeccHHHH------------HHHHHHHHHHhhhcCccce
Confidence 999999999999985 899999999999999999999999999999998 6999999999999999999
Q ss_pred cccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCccccccccccc
Q psy15389 734 LRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 813 (864)
Q Consensus 734 ~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG 813 (864)
+||||.+|.|++++.+||||||++||++++++|+++.....+++.++.+|++++|+++++|+.+||++|+|||+++++||
T Consensus 196 ~rf~g~~n~d~~~i~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~~~m~~~~~~~~kyls~~~i~RG 275 (379)
T cd02190 196 MRFEGSLNVDLNEITMNLVPFPRLHFLVSSLSPLYPLADVNVPPRRLDQMFSDAFSRNHQLIRADPKHGLYLACALLVRG 275 (379)
T ss_pred eecccccccchhhhccccccCCCceecccccccccchhhccccCCCHHHHHHHHHccccceeecCCCcchHHHHHHHHcC
Confidence 99999999999999999999999999999999999876666788999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCC
Q psy15389 814 DVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 856 (864)
Q Consensus 814 ~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~ 856 (864)
++.+.++.+++.+++.+ .+|++|+|+++++++|+++|...+
T Consensus 276 ~~~~~ei~~~~~~l~~~--~~fv~W~p~~~~~~~~~~~~~~~~ 316 (379)
T cd02190 276 NVSVSDLRRNIERLKPK--LKFVKWNQEGWKIGLCSVPPVGHS 316 (379)
T ss_pred CCCHHHHHHHHHHHhcc--CcCcCcCCCcEEEeecccCCCCcc
Confidence 99999999999988776 789999999999999999886544
No 29
>KOG1376|consensus
Probab=100.00 E-value=4.8e-78 Score=632.23 Aligned_cols=337 Identities=95% Similarity=1.458 Sum_probs=329.7
Q ss_pred ceeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccc
Q psy15389 493 SRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 572 (864)
Q Consensus 493 ~rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~ 572 (864)
|||||+||+||+|.|||+++|+++|.||||+++|.++.+......++.+++||+++..++++||+++||+||. ||+++.
T Consensus 1 m~e~i~ih~gqag~qi~naCwel~clEhgi~~~g~~p~~~~~~~~~~~~~tff~~t~~~k~~pr~~fVDlEPt-idevrt 79 (407)
T KOG1376|consen 1 MREIISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPDDKSVGKGDDSFNTFFSETGAGKHVPRAVFVDLEPT-IDEVRT 79 (407)
T ss_pred CCcceeeeeccccccccchhHHHHHHHhcCccCCcCCCCccccccCcccceeecccccccccceeEEEeccCc-cchhcc
Confidence 8999999999999999999999999999999999998766655567789999999999999999999999999 999999
Q ss_pred ccccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhh
Q psy15389 573 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 652 (864)
Q Consensus 573 ~~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~de 652 (864)
|+||.+|+|++++.|+++++||+|||+|+.|+|++|..+++||+.++.|..||||+++||+|||||||++|.++|.|..+
T Consensus 80 G~y~~lfHPeqlitGkedAannyArghyt~g~e~id~~~~~Ir~~Ad~C~glqgflvFhs~GGgtGsg~~s~lmerls~~ 159 (407)
T KOG1376|consen 80 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADLCTGLQGFLVFHSFGGGTGSGLGSLLMERLSVD 159 (407)
T ss_pred cchhhccCchhccCcchHhhhhHHhhhhhcchhhhHHHHHHHHHHHHhhccccceEEEEeccCCCcCCccchhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccc
Q psy15389 653 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 732 (864)
Q Consensus 653 yp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~ 732 (864)
|+||..+.++++|.+..++.+++|||++|+.+...+++|+++++||++++++|++++.++.|+|.++|++|+|+++++|+
T Consensus 160 ~GKkskl~fsiypapqvSt~vvePynsiltth~tle~sD~sf~vdnea~Ydicr~~l~i~rPtyt~lnr~i~qVvSsita 239 (407)
T KOG1376|consen 160 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPTYTNLNRLIAQVVSSITA 239 (407)
T ss_pred hhhccccccccccCccccccccCCccccccceeecccCcceeecCchhhcchhhhccccCCccccchhhhHHhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCcccccccccc
Q psy15389 733 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 812 (864)
Q Consensus 733 ~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 812 (864)
++||+|.+|.||.++++|||||| + |+|+.+..+..++++++.+++.++|++.|||++|||+.|||++|+++||
T Consensus 240 Slrf~g~lnvdl~efqTnlVpyp----l---yap~~s~~~a~he~~sv~~it~~~fe~~~qmvkcDP~~gkyma~cllyr 312 (407)
T KOG1376|consen 240 SLRFDGALNVDLTEFQTNLVPYP----L---YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 312 (407)
T ss_pred ccccCCcccccHHHHHhhCCCCc----c---cccchhhcccchhhhhHHhhccccccccccccccCCccchHHHHHHhcc
Confidence 99999999999999999999999 2 9999999999999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccCccc
Q psy15389 813 GDVVPKDVNAAIATIKTKRTIQFVD 837 (864)
Q Consensus 813 G~~~~~~i~~~~~~~~~k~~~~fv~ 837 (864)
|++.|+|++.++..+|.|++++||+
T Consensus 313 gdvvP~~v~~A~a~ikt~rt~qfvd 337 (407)
T KOG1376|consen 313 GDVVPKDVNAAIATIKTKRTIQFVD 337 (407)
T ss_pred CCcCcccchHHHHhhhhccccccce
Confidence 9999999999999999999999998
No 30
>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi
Probab=100.00 E-value=8.2e-71 Score=621.01 Aligned_cols=316 Identities=51% Similarity=0.898 Sum_probs=304.2
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccccc
Q psy15389 495 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 574 (864)
Q Consensus 495 EiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~ 574 (864)
|||+|||||||||||.+||+++ |+||+||++|+.++.++
T Consensus 1 eii~i~vGq~G~qig~~~w~~~-----------------------------------------i~iD~e~~~i~~i~~~~ 39 (382)
T cd06059 1 EIISIQIGQCGNQIGNKFWELL-----------------------------------------ILVDLDPRVINEILQGQ 39 (382)
T ss_pred CeEEEecCCcHHHHHHHHHHHH-----------------------------------------HcccCCcchhhhhhccc
Confidence 8999999999999999999964 99999999999999998
Q ss_pred ccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhC
Q psy15389 575 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG 654 (864)
Q Consensus 575 ~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp 654 (864)
.+.+|++++++.+++|+|||||+||+..|+++.|+++|+||+++|+||++|||+++||+|||||||+|++++|.|+|+||
T Consensus 40 ~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~l~gf~i~~sl~GGTGSG~gs~l~e~l~d~y~ 119 (382)
T cd06059 40 LSKLFDPNQLVNGKEGSGNNWARGYYTIGPELIDEILDRIRKQVEKCDSLQGFQITHSLGGGTGSGLGSLLLELLSDEYP 119 (382)
T ss_pred ccccCCcccEEeccccccccccccccccCHHHHHHHHHHHHHHHHhCCCcCceEEEEecCCCcchhHHHHHHHHHHHhcC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccccc
Q psy15389 655 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 734 (864)
Q Consensus 655 ~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~ 734 (864)
++.+++++|+|+...+++++++||++|+|++|.+++|+++++||++|.++|.+.+.+..++|+++|++||++|+++|+++
T Consensus 120 ~~~i~~~~v~P~~~~~~~~v~~yN~~lsl~~L~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~iia~~l~~it~~~ 199 (382)
T cd06059 120 KILINTFSIFPSPQGSSNVVEPYNSILSLNHLLENSDSVILFDNEALYNILTRQLDIDEPSFDDLNNIIAQIISSITASL 199 (382)
T ss_pred ccceEeEEEeccCccCCccccchHHHHhHHHHHhcCCeeEEeehHHHHHHHHHhcCCCCCChHHHHHHHHHhhccccccc
Confidence 99999999999987666899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCcccccccccccc
Q psy15389 735 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 814 (864)
Q Consensus 735 rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG~ 814 (864)
||||.+|.|++++++||||||++||++++++|+++.....++.+++.++++++|+++++|+.++++.|+||++++++||+
T Consensus 200 r~~g~~n~d~~~i~~~LvP~p~~~fl~~s~~P~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~la~~~~~RG~ 279 (382)
T cd06059 200 RFPGYLNFDLRKLATNLVPFPRLHFLTPSFAPLISYDSQTTEKLNLLQIINELFNNDNSFFSCDPTKGRYLAAALIFRGD 279 (382)
T ss_pred ccCCCcCCCHHHHhhhcCCCCCceeccccccccccchhcccccCCHHHHHHHHhhcccceeecCCCcchHHHHHHHHhCC
Confidence 99999999999999999999999999999999998766667788999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCC
Q psy15389 815 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 853 (864)
Q Consensus 815 ~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~ 853 (864)
+..+++.+++.+++.+..+. +|+|+++|+++|.++|.
T Consensus 280 ~~~~~v~~~~~~~~~~~~~~--~w~p~~~~~~~~~~~~~ 316 (382)
T cd06059 280 VFQSEIQEAINKLKNKLNIQ--SWIPDGFKVSNCKKPPR 316 (382)
T ss_pred CCHHHHHHHHHHHHHhcccc--cCCCCcEEEEecCCCCC
Confidence 99999999999998876655 89999999999999986
No 31
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=100.00 E-value=4.8e-64 Score=556.39 Aligned_cols=315 Identities=50% Similarity=0.863 Sum_probs=299.1
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccccc
Q psy15389 495 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 574 (864)
Q Consensus 495 EiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~ 574 (864)
|||+||+||||||||++||+++ |+||+|+++++.++.++
T Consensus 1 eii~i~iG~~G~~i~~~~~~~~-----------------------------------------v~idtd~~~l~~~~~~~ 39 (328)
T cd00286 1 EIVTIQLGQAGNQIGAKFWEQL-----------------------------------------VLVDTEPGVIDETLSGP 39 (328)
T ss_pred CeEEEecCccHhHHHHHHHHhh-----------------------------------------heecCCHHHHHHHhCcc
Confidence 8999999999999999999942 99999999999999888
Q ss_pred ccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhC
Q psy15389 575 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG 654 (864)
Q Consensus 575 ~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp 654 (864)
.+.+|++.+.+.+++|+||||++||+..|+++.|+++|+||+++|+||++|||+++||+|||||||+|++++|+|+|+||
T Consensus 40 ~~~~~~~~~~~~~~~gag~n~~~G~~~~~~~~~e~i~~~ir~~~E~cD~~~gf~i~~slgGGTGsG~~~~i~e~l~d~y~ 119 (328)
T cd00286 40 YRLLFCIGQLITHGGGAGNNWAFGHETAGEEYQEEILDIIRKEAEECDSLQGFFITHSLGGGTGSGLGPVLAERLKDEYP 119 (328)
T ss_pred cccccCccceeecCCCCCCCcceeeccccHHHHHHHHHHHHHHHHhCCCccceEEEeecCCCccccHHHHHHHHHHHHcC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccccc
Q psy15389 655 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 734 (864)
Q Consensus 655 ~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~ 734 (864)
++.+++++|+|+...+ +++++||++|++++|.+++|+++++||++|+++|.+.+.+..++|+++|++||++|+++|+++
T Consensus 120 ~~~~~~~~v~P~~~~~-~~~~~yNa~l~l~~L~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 198 (328)
T cd00286 120 KRLKITFSILPGPDEG-VIVRPYNSILTLHTLTEHSDCLVVIDNEALFDICPRPLHIDKPTFDHINELLATALSSLTTPL 198 (328)
T ss_pred ccceeEEEecCCCCCc-chhhhhHHHHHHHHHHhcCCeEEEecchhHHHHhHHhcCCCCCCHHHHHHHHHhhcccccccc
Confidence 9999999999997533 699999999999999999999999999999999999888889999999999999999999999
Q ss_pred ccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCcccccccccccc
Q psy15389 735 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 814 (864)
Q Consensus 735 rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG~ 814 (864)
||||.+|.|++++.++|+|||++||++++++|+.......+...++.++++++|++.++++.++++.++|+++++++||+
T Consensus 199 r~~g~~n~d~~~~~~~l~p~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rG~ 278 (328)
T cd00286 199 RFDGSLNVDLRELSENLVPFPRLHFLMVGYAPLDSEGSATPTTLRVAELVRQALRSKNQMVVCDPTHGGYIAALLLVRGP 278 (328)
T ss_pred ccCccccchHHHHhhhcCCCCCceeeccccCccccccccccccCCHHHHHHHHhCCCCeeeccCCCccchHHHHHHHhCC
Confidence 99999999999999999999999999999999987655566778999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCC
Q psy15389 815 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 853 (864)
Q Consensus 815 ~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~ 853 (864)
.+.+++.+++..++.+..+. +|+|+++++++|..||.
T Consensus 279 ~~~~~v~~~~~~l~~~~~~~--~w~~~~~~~~~~~~~~~ 315 (328)
T cd00286 279 VSPSEVREGIARVAPRTSHL--SWSPPGIKVGVSPTPPA 315 (328)
T ss_pred CChHHHHHHHHHHHHhCCcC--CcCCCCEeEeecCCCCC
Confidence 99999999999998876655 99999999999998875
No 32
>KOG1375|consensus
Probab=100.00 E-value=4.1e-63 Score=523.39 Aligned_cols=344 Identities=40% Similarity=0.809 Sum_probs=326.3
Q ss_pred CCcccccccCCCCccccceeeeCCCCceeeeeecccccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHH
Q psy15389 46 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRK 125 (864)
Q Consensus 46 ~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~ 125 (864)
.+++++|.+...++|+||+|+|||||++++.++.++++.+|+|++ +++| .|||+.|.+..|.
T Consensus 9 ~~i~~~~~~~~~~~~~~ravlvdlepgs~dsv~~~~~g~~frp~~---~~sg--------~ghy~~ga~~~ds------- 70 (369)
T KOG1375|consen 9 ERINVYYNEAGGGKYVPRAVLVDLEPGSMDSVRSGPFGQIFRPDN---GQSG--------KGHYTEGAELVDS------- 70 (369)
T ss_pred eeeeeeecccccccccchhheeeccCccccccccCccceeccCcC---CccC--------ccceeeeeeehhc-------
Confidence 567999999988999999999999999999999999999999999 3322 6889999988777
Q ss_pred hhhccCCCCceeEEeecCCccccChHHHHHHHHHHHhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEE
Q psy15389 126 LADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 205 (864)
Q Consensus 126 ~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~ 205 (864)
.||++||||++||++||||||+|+++++.|+++||.+.+.+++|+|++. ++++++|||+.|++.+|.+++|.++++
T Consensus 71 ---~~dclqgfql~hs~gggtGsg~gt~l~~k~~ee~~d~i~~~~sv~ps~k-sd~vvepyna~ls~~ql~en~~et~ci 146 (369)
T KOG1375|consen 71 ---SCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPK-SDTVVEPYNATLSVHQLVENADETFCI 146 (369)
T ss_pred ---ccchhhcceeeeeccCccccCcchhhHHHHHHhccchhcccccccCccc-ccceecccccccchhhhhcCCCccccc
Confidence 8999999999999999999999999999999999999999999999988 999999999999999999999999999
Q ss_pred echhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhccccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhc
Q psy15389 206 DNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 285 (864)
Q Consensus 206 dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~ 285 (864)
||++|+++|.+.++++.++ ++|.++||+|.+|.|+.++..|+||||++||+.++++|++......++
T Consensus 147 dNeal~dic~~~lkl~~~~-------------g~tt~~rf~g~lnadl~kl~vnmvpfp~lhffm~g~~pl~s~~~~q~~ 213 (369)
T KOG1375|consen 147 DNEALYDICFRTLKLKTPS-------------GVTTCLRFPGQLNADLTKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYR 213 (369)
T ss_pred ccHHHHHHHhhhhcccCCC-------------CceeecccccccchhhhhhhhccCCCcchhhccccccccccccccccc
Confidence 9999999999999999987 889999999999999999999999999999999999999998888889
Q ss_pred ccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhhcCCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccC
Q psy15389 286 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 365 (864)
Q Consensus 286 ~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~ 365 (864)
.+++.+++.++|+.+|++..|+ |++++.++|| +.+++.+.+..++.|....|++|+|+++|.++|..||..
T Consensus 214 a~tv~eltqq~fdaknmm~a~d-----yLt~a~~~rG--smkevDeqm~~vqnk~ss~f~~wiP~~vktavCdipp~g-- 284 (369)
T KOG1375|consen 214 ALTVPELTQQMFDAKNMMTACD-----YLTVAAMFRG--SMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPGG-- 284 (369)
T ss_pred cccccccccccccCcchhhhhh-----hhhhHHHhcc--chhhhHHHhhhccccCcchhhhhcccccceeeccCCCcc--
Confidence 9999999999999999999987 9999999999 889999999999999999999999999999999998754
Q ss_pred CCCcccccceEEEeeccHHHHHHHHHHHHHHHHHHhcccceeccccCCCCcccHHHHHHHHHHHHHHHHHhcCC
Q psy15389 366 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 439 (864)
Q Consensus 366 ~~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~m~~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~~~~~ 439 (864)
.+.+++.++|+|+|..+|+.+.++|..||+||||||||+++||+|+||+||..++++|+.+|+++.++
T Consensus 285 ------lkms~tf~~n~taiqelf~~i~eqftamfrrkAflhwy~~egMde~EFtEAes~~ndLi~eyqQy~~~ 352 (369)
T KOG1375|consen 285 ------LKMSSTFIGNNTAIQELFRCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQQD 352 (369)
T ss_pred ------ccccccccccchhHHHHHHHhhhHHHHHHHhhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHhhhh
Confidence 34788999999999999999999999999999999999999999999999999999999999998544
No 33
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=100.00 E-value=4.3e-60 Score=524.83 Aligned_cols=328 Identities=48% Similarity=0.827 Sum_probs=304.9
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeeccc
Q psy15389 2 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 81 (864)
Q Consensus 2 Eiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~ 81 (864)
||++||+||||||||++||+++ |+||+|+++++.++.++
T Consensus 1 eii~i~iG~~G~~i~~~~~~~~-----------------------------------------v~idtd~~~l~~~~~~~ 39 (328)
T cd00286 1 EIVTIQLGQAGNQIGAKFWEQL-----------------------------------------VLVDTEPGVIDETLSGP 39 (328)
T ss_pred CeEEEecCccHhHHHHHHHHhh-----------------------------------------heecCCHHHHHHHhCcc
Confidence 8999999999999999999842 99999999999999888
Q ss_pred ccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHH
Q psy15389 82 YRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 161 (864)
Q Consensus 82 ~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~de 161 (864)
.+.+|++.+.+.+++|+||||+ +||+..|+++.|+++|+||+++|+||++|||+++||+|||||||+|++++|+|+|+
T Consensus 40 ~~~~~~~~~~~~~~~gag~n~~--~G~~~~~~~~~e~i~~~ir~~~E~cD~~~gf~i~~slgGGTGsG~~~~i~e~l~d~ 117 (328)
T cd00286 40 YRLLFCIGQLITHGGGAGNNWA--FGHETAGEEYQEEILDIIRKEAEECDSLQGFFITHSLGGGTGSGLGPVLAERLKDE 117 (328)
T ss_pred cccccCccceeecCCCCCCCcc--eeeccccHHHHHHHHHHHHHHHHhCCCccceEEEeecCCCccccHHHHHHHHHHHH
Confidence 8888999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhcc
Q psy15389 162 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 241 (864)
Q Consensus 162 yp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~ 241 (864)
||++++++++|+|+...+ +++++||++|+|++|.+++|+++++||++|.++|.+.+.+..++|+++|++||++|+++|.
T Consensus 118 y~~~~~~~~~v~P~~~~~-~~~~~yNa~l~l~~L~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 196 (328)
T cd00286 118 YPKRLKITFSILPGPDEG-VIVRPYNSILTLHTLTEHSDCLVVIDNEALFDICPRPLHIDKPTFDHINELLATALSSLTT 196 (328)
T ss_pred cCccceeEEEecCCCCCc-chhhhhHHHHHHHHHHhcCCeEEEecchhHHHHhHHhcCCCCCCHHHHHHHHHhhcccccc
Confidence 999999999999997533 6999999999999999999999999999999999998888899999999999999999999
Q ss_pred ccccCCCCCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhhc
Q psy15389 242 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 321 (864)
Q Consensus 242 ~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 321 (864)
++||||.+|.|++++.++|+|||++||++++++|+.+.....+...++.+++++++++.++++.+++..++++++++++|
T Consensus 197 ~~r~~g~~n~d~~~~~~~l~p~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 276 (328)
T cd00286 197 PLRFDGSLNVDLRELSENLVPFPRLHFLMVGYAPLDSEGSATPTTLRVAELVRQALRSKNQMVVCDPTHGGYIAALLLVR 276 (328)
T ss_pred ccccCccccchHHHHhhhcCCCCCceeeccccCccccccccccccCCHHHHHHHHhCCCCeeeccCCCccchHHHHHHHh
Confidence 99999999999999999999999999999999999876555667789999999999999999988888999999999999
Q ss_pred CCCChHHHHHHHHHhhccCcccccccCCCCceEEEecCCCcccCCCCcccccceEEEeecc
Q psy15389 322 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 382 (864)
Q Consensus 322 G~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNs 382 (864)
|+.+.+++.+.+..++.+..+. +|+|++++++.|..+|.. +.+.++++++|+
T Consensus 277 G~~~~~~v~~~~~~l~~~~~~~--~w~~~~~~~~~~~~~~~~-------~~~~~~~~l~Ns 328 (328)
T cd00286 277 GPVSPSEVREGIARVAPRTSHL--SWSPPGIKVGVSPTPPAS-------EHKVSALLLSNS 328 (328)
T ss_pred CCCChHHHHHHHHHHHHhCCcC--CcCCCCEeEeecCCCCCC-------CcCeEEEEeccC
Confidence 9999999998888888776554 899999999999876530 235779999986
No 34
>KOG1375|consensus
Probab=100.00 E-value=9.1e-54 Score=452.46 Aligned_cols=282 Identities=41% Similarity=0.805 Sum_probs=269.8
Q ss_pred CCccccccccCCCCCcccceeEeCCCCCeecccccccccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHh
Q psy15389 538 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 617 (864)
Q Consensus 538 ~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~ 617 (864)
..+++++|.+...++|+||+|+|||||+++++++.++++.+|+|++ +++| .|+|+.|.++.|.
T Consensus 8 ~~~i~~~~~~~~~~~~~~ravlvdlepgs~dsv~~~~~g~~frp~~---~~sg------~ghy~~ga~~~ds-------- 70 (369)
T KOG1375|consen 8 LERINVYYNEAGGGKYVPRAVLVDLEPGSMDSVRSGPFGQIFRPDN---GQSG------KGHYTEGAELVDS-------- 70 (369)
T ss_pred eeeeeeeecccccccccchhheeeccCccccccccCccceeccCcC---CccC------ccceeeeeeehhc--------
Confidence 4567999999999999999999999999999999999999999998 4444 8999999988776
Q ss_pred hhccCCccceeeEeecCCCccccchHHHHHHHHhhhCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCcccccc
Q psy15389 618 ADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 697 (864)
Q Consensus 618 ~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~d 697 (864)
.||++||||++||+|||||||+|+++++.|+++||.+++.+++|+|+++ ++++++|||+.|++++|.+++|.++++|
T Consensus 71 --~~dclqgfql~hs~gggtGsg~gt~l~~k~~ee~~d~i~~~~sv~ps~k-sd~vvepyna~ls~~ql~en~~et~cid 147 (369)
T KOG1375|consen 71 --SCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPK-SDTVVEPYNATLSVHQLVENADETFCID 147 (369)
T ss_pred --ccchhhcceeeeeccCccccCcchhhHHHHHHhccchhcccccccCccc-ccceecccccccchhhhhcCCCcccccc
Confidence 8999999999999999999999999999999999999999999999988 9999999999999999999999999999
Q ss_pred chHHHHHhhccCCCCCCCcchhhHHHHHHhhccccccccCCCCccchhhhccCCccCCCccccccccccccccccccccc
Q psy15389 698 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 777 (864)
Q Consensus 698 N~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~ 777 (864)
|++|++||.+.++++.|+ ++|.++||||.+|.|++++..|+||||++||++++++|++....+++++
T Consensus 148 Neal~dic~~~lkl~~~~-------------g~tt~~rf~g~lnadl~kl~vnmvpfp~lhffm~g~~pl~s~~~~q~~a 214 (369)
T KOG1375|consen 148 NEALYDICFRTLKLKTPS-------------GVTTCLRFPGQLNADLTKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRA 214 (369)
T ss_pred cHHHHHHHhhhhcccCCC-------------CceeecccccccchhhhhhhhccCCCcchhhcccccccccccccccccc
Confidence 999999999999999988 8999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHhcCCCCCcccccCCCCccccccccccccCChhhHHHHHHhhhccCccCccccCCCCceEEEeCCCCCCCCC
Q psy15389 778 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 857 (864)
Q Consensus 778 ~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~~~k~~~~fv~W~p~~~k~~~~~~~p~~~~~ 857 (864)
+++++|++++|+.+|+|..|| ||+++.++|| +.+++++++..++.|++.+|++|+|+++|+++|.+||.....
T Consensus 215 ~tv~eltqq~fdaknmm~a~d-----yLt~a~~~rG--smkevDeqm~~vqnk~ss~f~~wiP~~vktavCdipp~glkm 287 (369)
T KOG1375|consen 215 LTVPELTQQMFDAKNMMTACD-----YLTVAAMFRG--SMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPGGLKM 287 (369)
T ss_pred ccccccccccccCcchhhhhh-----hhhhHHHhcc--chhhhHHHhhhccccCcchhhhhcccccceeeccCCCccccc
Confidence 999999999999999999997 9999999999 899999999999999999999999999999999999987776
Q ss_pred CC
Q psy15389 858 GD 859 (864)
Q Consensus 858 ~~ 859 (864)
+.
T Consensus 288 s~ 289 (369)
T KOG1375|consen 288 SS 289 (369)
T ss_pred cc
Confidence 65
No 35
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=100.00 E-value=1.3e-49 Score=415.20 Aligned_cols=216 Identities=46% Similarity=0.862 Sum_probs=202.7
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccccc
Q psy15389 495 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 574 (864)
Q Consensus 495 EiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~ 574 (864)
|||+|||||||||||.+||+++++||+++++.. ....+++.++||+|...++|+||+|+||+||+++++++.++
T Consensus 1 eii~i~iGq~G~qIg~~~~~~l~~e~~~~~~~~------~~~~~~~~~~~f~~~~~~~~~~r~i~iDtd~~~l~~i~~~~ 74 (216)
T PF00091_consen 1 EIIVIGIGQCGNQIGDAFWELLCREHGINPDSK------SQYNRENINSFFSESSSGKYVPRAIAIDTDPKVLDEIRASP 74 (216)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHCTBTTTSS------SSTTSSTGCCTEEESTTTBESEEEEEEESSHHHHHHHHTSE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHhhccccccc------cccccccccceeeeccccccccccccccccccccccccccc
Confidence 899999999999999999999999999988711 12335677999999999999999999999999999999988
Q ss_pred ccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhC
Q psy15389 575 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG 654 (864)
Q Consensus 575 ~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp 654 (864)
.+.+|++++++.+++|+||||++||+..|+++.++++|+||+++|+||.+++|+++||+|||||||+|+.|+++|+++||
T Consensus 75 ~~~l~~~~~~~~~~~g~g~n~~~G~~~~~~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~ 154 (216)
T PF00091_consen 75 KRSLFDPNNLISGQEGSGNNWAVGYYTFGEEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYP 154 (216)
T ss_dssp ETTESCGGGEEETSSTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTST
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhccccccccceecccccceeccccccccchhhhcccc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcch
Q psy15389 655 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 718 (864)
Q Consensus 655 ~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~ 718 (864)
++.+++++|+|+. .|+++++||++++|++|.+++|++|+|||++|.++|.+++++++|+|++
T Consensus 155 ~~~~~~~~ilP~~--~e~~~~~~Na~~~l~~l~~~~d~~i~~dN~~l~~~~~~~l~~~~~~f~~ 216 (216)
T PF00091_consen 155 KKPIISFSILPFS--SEGVVEPYNALLSLSELQEYADSVILFDNDALYKICKNQLGIENPAFNE 216 (216)
T ss_dssp TSEEEEEEEE-CG--GGSHHHHHHHHHHHHHHHHTSSEEEEEEHHHHHHHHHHTSSHSSHHHHH
T ss_pred ccceeeccccccc--cccccccceehhHHHHHHHhCCEEEEEcHHHHHHHHhccCCCCCCCcCC
Confidence 9999999999993 4999999999999999999999999999999999999999999888863
No 36
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=100.00 E-value=2e-47 Score=398.82 Aligned_cols=215 Identities=45% Similarity=0.842 Sum_probs=202.3
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeeccc
Q psy15389 2 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 81 (864)
Q Consensus 2 Eiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~ 81 (864)
|||+||+||||||||.+||+++++||+++++. .....+.+.++||+|...++|+||+|+||+|++++++++.++
T Consensus 1 eii~i~iGq~G~qIg~~~~~~l~~e~~~~~~~------~~~~~~~~~~~~f~~~~~~~~~~r~i~iDtd~~~l~~i~~~~ 74 (216)
T PF00091_consen 1 EIIVIGIGQCGNQIGDAFWELLCREHGINPDS------KSQYNRENINSFFSESSSGKYVPRAIAIDTDPKVLDEIRASP 74 (216)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHCTBTTTS------SSSTTSSTGCCTEEESTTTBESEEEEEEESSHHHHHHHHTSE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHhhcccccc------ccccccccccceeeeccccccccccccccccccccccccccc
Confidence 89999999999999999999999999998871 222345778999999999999999999999999999999888
Q ss_pred ccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHH
Q psy15389 82 YRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 161 (864)
Q Consensus 82 ~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~de 161 (864)
.+.+|.+++++.+++|+|+||+ .||+..|+++.++++|+||+++|+||.+|||+++||+|||||||+|+.|+++|+++
T Consensus 75 ~~~l~~~~~~~~~~~g~g~n~~--~G~~~~~~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~ 152 (216)
T PF00091_consen 75 KRSLFDPNNLISGQEGSGNNWA--VGYYTFGEEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREE 152 (216)
T ss_dssp ETTESCGGGEEETSSTSTTSHH--HHHHHHHHHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccc--ccccccccccccccccccchhhccccccccceecccccceeccccccccchhhhcc
Confidence 8889999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChh
Q psy15389 162 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 226 (864)
Q Consensus 162 yp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~ 226 (864)
||++++++++|+|+. .|+++++||++++|++|.+++|++++|||++|.++|.+.++++.|+|.
T Consensus 153 y~~~~~~~~~ilP~~--~e~~~~~~Na~~~l~~l~~~~d~~i~~dN~~l~~~~~~~l~~~~~~f~ 215 (216)
T PF00091_consen 153 YPKKPIISFSILPFS--SEGVVEPYNALLSLSELQEYADSVILFDNDALYKICKNQLGIENPAFN 215 (216)
T ss_dssp STTSEEEEEEEE-CG--GGSHHHHHHHHHHHHHHHHTSSEEEEEEHHHHHHHHHHTSSHSSHHHH
T ss_pred ccccceeeccccccc--cccccccceehhHHHHHHHhCCEEEEEcHHHHHHHHhccCCCCCCCcC
Confidence 999999999999994 499999999999999999999999999999999999999999988875
No 37
>cd06060 misato Human Misato shows similarity with Tubulin/FtsZ family of GTPases and is localized to the the outer membrane of mitochondria. It has a role in mitochondrial fusion and in mitochondrial distribution and morphology. Mutations in its Drosophila homolog (misato) lead to irregular chromosome segregation during mitosis. Deletion of the budding yeast homolog DML1 is lethal and unregulate expression of DML1 leads to mitochondrial dispersion and abnormalities in cell morphology. The Misato/DML1 protein family is conserved from yeast to human, but its exact function is still unknown.
Probab=100.00 E-value=2.7e-45 Score=417.90 Aligned_cols=411 Identities=17% Similarity=0.237 Sum_probs=291.5
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCC----CCccccceeeeCCCCceeee
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG----AGKHVPRAVFVDLEPTVVDE 76 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~----~~~~~pRailvDle~~~i~~ 76 (864)
|||||||+||++|+||+||||.+...++..+++. ....+.+++|+++. ..+|+||+|++|++++....
T Consensus 1 rEIiTlq~G~~aN~vgtHfwN~Qe~~~~y~~~~~--------~~~~~~dvl~r~g~~~~g~~tytPR~l~~Dlkg~~gsl 72 (493)
T cd06060 1 REVLTLQLGHYANFVGTHWWNLQEANFGYDPDSP--------ASELDHDVLYREGRTRQGQVTYTPRLLLLDLKGTLGHL 72 (493)
T ss_pred CceEEEeccCccccHhhhhhhhhhhhcCCCCCCc--------cccCCCceeeeccccCCCceeEcCcEEEEecCCccccc
Confidence 8999999999999999999998888887665532 12356789999854 56899999999999876543
Q ss_pred eeccc----------------ccccCCCCcccccc-----cccccccCCccccc---ccchhhHHHHHHHHHHhhhccCC
Q psy15389 77 VRTGT----------------YRQLFHPEQLITGK-----EDAARQIGEYSGHY---TIGKEIVDLVLDRIRKLADQCTG 132 (864)
Q Consensus 77 ~~~~~----------------~~~~~~~~~~~~~~-----~gsgnn~a~~~G~~---~~G~~~~e~~~d~iR~~vE~cD~ 132 (864)
.+.+. .+..|+|+++...+ .+.+++|+ .|+- ..+.+..|+++|+||+++|+||+
T Consensus 73 ~~~~~l~~~~l~~~v~~WSDy~r~~yhPrS~~~L~~~~~~~~~~~fd~--fg~G~~~f~~~~~~d~~~DrIR~~vEeCD~ 150 (493)
T cd06060 73 PEEGSLKVYNLEASVNVWSDYLYARLHPRSINVINQYNHDGTSQPFEV--FGQGESLWQDESFQEEFEDRLRFYVEECDY 150 (493)
T ss_pred ccccCcCCcccccchhhhhhcceeeeCCCceeeccchhcCCCCCCccc--cccChhhhcchhhHHHHHHHHHHHHHhCcc
Confidence 33221 25578999987653 24556777 3321 13456789999999999999999
Q ss_pred CCceeEEeecCCccccChHHHHHHHHHHHhCCcceeEEEEecCCCC----CcccccchhhHHHHHHhhhcCCEEEEEech
Q psy15389 133 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQV----STAVVEPYNSILTTHTTLEHSDCAFMVDNE 208 (864)
Q Consensus 133 lqgf~i~~sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~----~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~ 208 (864)
+||||+++|++||| ||+|+.++|+|+|||||+.+++++++|.... .+.++++||++|++.+|.++||+++|+.-.
T Consensus 151 LQGFqi~~sl~gG~-sG~gs~lLE~L~DEy~k~~i~~~~v~P~~~~~~~~~~~vv~~yNs~LSl~~L~e~sdl~vPl~~~ 229 (493)
T cd06060 151 LQGFQVLCDLHDGF-SGVGAKCLEHLQDEYGKASLLFPGLPPVIPPDASSDKNSIRVLNTALGLAQLSEHSSLFVPLSLS 229 (493)
T ss_pred cccEEEEEecCCcc-cchHHHHHHHHHHhcCccceeEEEeCCCcccccccchhHHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 99999999999999 8999999999999999999999999997531 257899999999999999999999999744
Q ss_pred -hHHHhhh-----hcCCCCCCChhhHHHHHHHHHhhhccccccCCCCCCChhhhhhcCcCCCCcccCcccc-ccccchhh
Q psy15389 209 -AIYDICR-----RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY-APVISAEK 281 (864)
Q Consensus 209 -al~~~~~-----~~l~~~~~~~~~~N~lia~~i~~~t~~~rf~g~~n~dl~~l~~nLvP~P~~~fl~~s~-~P~~~~~~ 281 (864)
.+|+... ..+.++..+..+..+++|.+|.++|.|+|..+.. .+|.+|...|.+..| ++...+. .|+-.
T Consensus 230 ~~~w~~~~~p~~~~~l~~d~~~~~htSAllA~aldT~TLp~Rl~~~~-~~m~~l~~~l~~~gR-ki~~~~~a~P~p~--- 304 (493)
T cd06060 230 GTLWRKPGPPRTFPYLNYDAELPYHTSALLATALDTLTLPYRLKSSP-SSLSGLCDDLSFSGR-KVVAAGLALPFPM--- 304 (493)
T ss_pred cccccCCCCCCCCcccccCCCCchHHHHHHHHHHhhccccceeccCC-ccHHHHHHHhhhccc-hhhhhccCCCCCC---
Confidence 4443322 2234445567788999999999999999998754 578899988887554 5444333 34422
Q ss_pred hhhcccCHHHHHHHhcCCC--CceeecC-CCCCchhhhhhhhcCCCC----------------------hHHHHHHHHHh
Q psy15389 282 AYHEQLSVAEITNACFEPA--NQMVKCD-PRHGKYMACCMLYRGDVV----------------------PKDVNAAIATI 336 (864)
Q Consensus 282 ~~~~~~s~~~i~~~~~~~~--~~~~~~~-~~~~~~ls~~~~~RG~~~----------------------~~~i~~~~~~~ 336 (864)
....++.++..++-... .++ .++ +...+++++.+++||... .+++.+.+.+.
T Consensus 305 --~~~~~l~d~L~~~~~~~~~~~l-~p~~~~~~~~~~qsv~~rG~~~~~~~~~~~~~~~~~~~~~~c~s~~~~l~~y~~~ 381 (493)
T cd06060 305 --VGGQDLIDFLDQSDGAVPWLQL-TPGCQIGTRCVIQSVVLRGIPEERLKRRLLAGDQARSPAYACSSVEEMLQLYLQC 381 (493)
T ss_pred --CCCCcHHHHHHhcCCCCCcccc-CCCCccCceeeeeeehhcCCChhhccccccccccccccchhcCCHHHHHHHHHHh
Confidence 12335566665542211 222 222 234578889999999651 11232222222
Q ss_pred hccCcccccccCCCCceEEEe-------cCCCccc---------CC--CCcccccceEEEeeccHHHHHHHHHHHHHHHH
Q psy15389 337 KTKRTIQFVDWCPTGFKVGIN-------YQPPTVV---------PG--GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 398 (864)
Q Consensus 337 ~~~~~~~f~~W~p~~~~v~~~-------~~~p~~~---------~~--~~~~~~~~s~~~lsNst~i~~~l~~l~~~f~~ 398 (864)
..+.+.....-.+.++++..- ......+ .. .+..| .++.|.+++++...|+.++.++.|
T Consensus 382 ~~~~s~~~~~~~~~p~~~~~PfP~if~~~v~~~G~~~~~~~~~~~~~~V~s~p---~~a~l~ss~~l~~~l~~l~~~~~k 458 (493)
T cd06060 382 QYPGSMSALSVLPLPLKIRVPFPYIFNPNISADGFVLDNSSRGSAGADVESIP---VLAALQSSPSLGEMLESLHRQLSK 458 (493)
T ss_pred ccCCcchhheecCCCCCCCCCCchhhccccCCCccccCCCcccccccceeech---hhhhhcCchHHHHHHHHHHHHHHh
Confidence 222221111112222222100 0000000 00 00111 256788999999999999999999
Q ss_pred HHhcccceeccccCCCCcccHHHHHHHHHHHHHHHHH
Q psy15389 399 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 435 (864)
Q Consensus 399 m~~rrAflH~Y~~eGmee~eF~Ea~~~l~~li~~Y~~ 435 (864)
+--+| +|.|...|+|+|||+|+.++|.+++++|++
T Consensus 459 l~~~r--~~~~~~~g~e~de~~e~le~L~~~~~~Y~~ 493 (493)
T cd06060 459 LDLRR--KASFFESGLEEDEYKELLEQLLDLAECYED 493 (493)
T ss_pred hhhHh--hhcccccccCHHHHHHHHHHHHHHHHhhcC
Confidence 99999 899999999999999999999999999974
No 38
>cd06060 misato Human Misato shows similarity with Tubulin/FtsZ family of GTPases and is localized to the the outer membrane of mitochondria. It has a role in mitochondrial fusion and in mitochondrial distribution and morphology. Mutations in its Drosophila homolog (misato) lead to irregular chromosome segregation during mitosis. Deletion of the budding yeast homolog DML1 is lethal and unregulate expression of DML1 leads to mitochondrial dispersion and abnormalities in cell morphology. The Misato/DML1 protein family is conserved from yeast to human, but its exact function is still unknown.
Probab=100.00 E-value=2.1e-35 Score=336.88 Aligned_cols=305 Identities=18% Similarity=0.241 Sum_probs=225.5
Q ss_pred eeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccC----CCCCcccceeEeCCCCCeecc
Q psy15389 494 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET----GAGKHVPRAVFVDLEPTVVDE 569 (864)
Q Consensus 494 rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~----~~~~~~pRailiD~e~~~i~~ 569 (864)
|||||||+||++|+||+||||.+...+++.+++... ..+.+++|++. +..+|+||+|++|+..+.-.-
T Consensus 1 rEIiTlq~G~~aN~vgtHfwN~Qe~~~~y~~~~~~~--------~~~~dvl~r~g~~~~g~~tytPR~l~~Dlkg~~gsl 72 (493)
T cd06060 1 REVLTLQLGHYANFVGTHWWNLQEANFGYDPDSPAS--------ELDHDVLYREGRTRQGQVTYTPRLLLLDLKGTLGHL 72 (493)
T ss_pred CceEEEeccCccccHhhhhhhhhhhhcCCCCCCccc--------cCCCceeeeccccCCCceeEcCcEEEEecCCccccc
Confidence 799999999999999999999998888777665321 23458999983 466899999999998753322
Q ss_pred cc----------------cccccccCCCcceeecc-----ccCcCCCcccccc---cchhhHHHHHHHHHHhhhccCCcc
Q psy15389 570 VR----------------TGTYRQLFHPEQLITGK-----EDAANNYARGHYT---IGKEIVDLVLDRIRKLADQCTGLQ 625 (864)
Q Consensus 570 i~----------------~~~~~~lf~~~~~~~~~-----~gagnnwa~G~~~---~G~~~~~~~~d~ir~~~E~cD~lq 625 (864)
-+ ..-.+-.|+|+++..-. .+.+++|+.|+-. .+.+..|+++|+||+++|+||++|
T Consensus 73 ~~~~~l~~~~l~~~v~~WSDy~r~~yhPrS~~~L~~~~~~~~~~~fd~fg~G~~~f~~~~~~d~~~DrIR~~vEeCD~LQ 152 (493)
T cd06060 73 PEEGSLKVYNLEASVNVWSDYLYARLHPRSINVINQYNHDGTSQPFEVFGQGESLWQDESFQEEFEDRLRFYVEECDYLQ 152 (493)
T ss_pred ccccCcCCcccccchhhhhhcceeeeCCCceeeccchhcCCCCCCccccccChhhhcchhhHHHHHHHHHHHHHhCcccc
Confidence 11 11224458999887643 3566777766432 345688999999999999999999
Q ss_pred ceeeEeecCCCccccchHHHHHHHHhhhCCcceEEEEEecCCCC----CCcccchhhHHHHHhhhhhccCccccccchH-
Q psy15389 626 GFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQV----STAVVEPYNSILTTHTTLEHSDCAFMVDNEA- 700 (864)
Q Consensus 626 gf~i~~Sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~----~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~a- 700 (864)
|||+++|++||| ||+|+.++|+|+|||||+.+++++++|.+.. .+.++++||++|++++|.+++|+++++.-..
T Consensus 153 GFqi~~sl~gG~-sG~gs~lLE~L~DEy~k~~i~~~~v~P~~~~~~~~~~~vv~~yNs~LSl~~L~e~sdl~vPl~~~~~ 231 (493)
T cd06060 153 GFQVLCDLHDGF-SGVGAKCLEHLQDEYGKASLLFPGLPPVIPPDASSDKNSIRVLNTALGLAQLSEHSSLFVPLSLSGT 231 (493)
T ss_pred cEEEEEecCCcc-cchHHHHHHHHHHhcCccceeEEEeCCCcccccccchhHHHHHHHHHHHHHHHhcCCEEEEEecccc
Confidence 999999999999 8999999999999999999999999997532 2678999999999999999999999996442
Q ss_pred HHHHh-----hccCCCCCCCcchhhHHHHHHhhccccccccCCCCccchhhhccCCccCCCccccccccc-ccccccccc
Q psy15389 701 IYDIC-----RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA-PVISAEKAY 774 (864)
Q Consensus 701 l~~i~-----~~~l~~~~~~~~~~N~~Ia~~is~~t~~~rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~-P~~~~~~~~ 774 (864)
++... ...+.++...-.+.-.++|.+|.++|.+.|..+.. .+|.+|..+|.+.-| |+...+.+ |+-..
T Consensus 232 ~w~~~~~p~~~~~l~~d~~~~~htSAllA~aldT~TLp~Rl~~~~-~~m~~l~~~l~~~gR-ki~~~~~a~P~p~~---- 305 (493)
T cd06060 232 LWRKPGPPRTFPYLNYDAELPYHTSALLATALDTLTLPYRLKSSP-SSLSGLCDDLSFSGR-KVVAAGLALPFPMV---- 305 (493)
T ss_pred cccCCCCCCCCcccccCCCCchHHHHHHHHHHhhccccceeccCC-ccHHHHHHHhhhccc-hhhhhccCCCCCCC----
Confidence 22211 11223333445677899999999999999998765 579999999997555 77776655 55321
Q ss_pred ccccCHHHHHHHhcCCC--CCccccc-CCCCccccccccccccC
Q psy15389 775 HEQLSVAEITNACFEPA--NQMVKCD-PRHGKYMACCMLYRGDV 815 (864)
Q Consensus 775 ~~~~~~~~l~~~~~~~~--n~~~~~~-~~~~~~ls~~~~~RG~~ 815 (864)
..-+..++..++-... .++ .++ +....+.+..++.||-.
T Consensus 306 -~~~~l~d~L~~~~~~~~~~~l-~p~~~~~~~~~~qsv~~rG~~ 347 (493)
T cd06060 306 -GGQDLIDFLDQSDGAVPWLQL-TPGCQIGTRCVIQSVVLRGIP 347 (493)
T ss_pred -CCCcHHHHHHhcCCCCCcccc-CCCCccCceeeeeeehhcCCC
Confidence 1224455555442111 222 333 22356888889999943
No 39
>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain. This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.
Probab=100.00 E-value=1.9e-36 Score=310.25 Aligned_cols=185 Identities=42% Similarity=0.675 Sum_probs=172.9
Q ss_pred cccccCCCCCcccceeEeCCCCCeecccccccccccCCCcceeeccccCcCCCcccccc-----cchhhHHHHHHHHHHh
Q psy15389 543 TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT-----IGKEIVDLVLDRIRKL 617 (864)
Q Consensus 543 ~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~~~~lf~~~~~~~~~~gagnnwa~G~~~-----~G~~~~~~~~d~ir~~ 617 (864)
.+|.+ |++.||+|++|+|+++++.+..++.+..|++.+.+.++.++||||++||++ .|+++.++++|+||++
T Consensus 3 ~~~g~---g~~g~r~v~~d~e~~~i~~i~~~t~~~~l~~~~~~~~k~~~Gn~~~~G~~~~~~~~~g~~~~~~~~~~ir~~ 79 (192)
T smart00864 3 KVFGV---GGYGPNAVLVDLEPGVVDEVRANTDAQALNPESLASGKIGAGNNWTRGLGAGADPEVGREAAEESLDEIREE 79 (192)
T ss_pred EEEEe---CCchhhHHhhhcccCCceEEEECCHHHHhCCcccccchhcccccccccCCCCCChHHHHHHHHHHHHHHHHH
Confidence 34554 478999999999999999998888888999988999999999999999998 8999999999999999
Q ss_pred hhccCCccceeeEeecCCCccccchHHHHHHHHhhhCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCcccccc
Q psy15389 618 ADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 697 (864)
Q Consensus 618 ~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~d 697 (864)
+|+| ++|+++||+|||||||+|+++++.++ +||++. ++++|+|. ..|.++++||++++|++|.+++|+++++|
T Consensus 80 le~~---d~~~i~~slgGGTGsG~~~~i~~~~~-~~~~~~-~~~~v~P~--~~e~~~~~~Na~~~l~~l~~~~d~~i~~d 152 (192)
T smart00864 80 LEGA---DGVFITAGMGGGTGTGAAPVIAEIAK-EYGILT-VAVVTKPF--VFEGVVRPYNAELGLEELREHVDSLIVID 152 (192)
T ss_pred hcCC---CEEEEeccCCCCccccHHHHHHHHHH-HcCCcE-EEEEEEeE--eecchhHHHHHHHHHHHHHHhCCEEEEEE
Confidence 9999 89999999999999999999999999 999887 99999994 37889999999999999999999999999
Q ss_pred chHHHHHhhccCCCCCCCcchhhHHHHHHhhccccccccCC
Q psy15389 698 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 738 (864)
Q Consensus 698 N~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~rf~g 738 (864)
|++|.++|.+++.+ .++|+++|++||++|+++|+++||||
T Consensus 153 N~~l~~~~~~~~~~-~~~~~~~N~~i~~~i~~i~~~~rf~g 192 (192)
T smart00864 153 NDALLDICGRNLPI-RPAFKDANDLLAQAVSGITDLIRFPG 192 (192)
T ss_pred hHHHHHHHhccCCc-hHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999887766 78999999999999999999999997
No 40
>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain. This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.
Probab=100.00 E-value=2e-34 Score=295.45 Aligned_cols=185 Identities=41% Similarity=0.641 Sum_probs=172.6
Q ss_pred cccccCCCCccccceeeeCCCCceeeeeecccccccCCCCcccccccccccccCCcccccc-----cchhhHHHHHHHHH
Q psy15389 50 TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAARQIGEYSGHYT-----IGKEIVDLVLDRIR 124 (864)
Q Consensus 50 ~~F~e~~~~~~~pRailvDle~~~i~~~~~~~~~~~~~~~~~~~~~~gsgnn~a~~~G~~~-----~G~~~~e~~~d~iR 124 (864)
++|.+ |++.||+|++|+|+++++.+..++.+..|++++.+..+.++||||+ +||+. .|+++.++++|+||
T Consensus 3 ~~~g~---g~~g~r~v~~d~e~~~i~~i~~~t~~~~l~~~~~~~~k~~~Gn~~~--~G~~~~~~~~~g~~~~~~~~~~ir 77 (192)
T smart00864 3 KVFGV---GGYGPNAVLVDLEPGVVDEVRANTDAQALNPESLASGKIGAGNNWT--RGLGAGADPEVGREAAEESLDEIR 77 (192)
T ss_pred EEEEe---CCchhhHHhhhcccCCceEEEECCHHHHhCCcccccchhccccccc--ccCCCCCChHHHHHHHHHHHHHHH
Confidence 45655 3789999999999999999988888889999888899999999999 99998 89999999999999
Q ss_pred HhhhccCCCCceeEEeecCCccccChHHHHHHHHHHHhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEE
Q psy15389 125 KLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 204 (864)
Q Consensus 125 ~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~ 204 (864)
+++|+| |+|+++||+|||||||+|++++|.++ +||++. ++++|+|. ..|+++++||++++|++|.+++|.+++
T Consensus 78 ~~le~~---d~~~i~~slgGGTGsG~~~~i~~~~~-~~~~~~-~~~~v~P~--~~e~~~~~~Na~~~l~~l~~~~d~~i~ 150 (192)
T smart00864 78 EELEGA---DGVFITAGMGGGTGTGAAPVIAEIAK-EYGILT-VAVVTKPF--VFEGVVRPYNAELGLEELREHVDSLIV 150 (192)
T ss_pred HHhcCC---CEEEEeccCCCCccccHHHHHHHHHH-HcCCcE-EEEEEEeE--eecchhHHHHHHHHHHHHHHhCCEEEE
Confidence 999999 99999999999999999999999999 998877 99999995 378899999999999999999999999
Q ss_pred EechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhccccccCC
Q psy15389 205 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 247 (864)
Q Consensus 205 ~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~~~rf~g 247 (864)
+||++|.++|.+.+.+ .++|+++|++||+.|+++|.++||||
T Consensus 151 ~dN~~l~~~~~~~~~~-~~~~~~~N~~i~~~i~~i~~~~rf~g 192 (192)
T smart00864 151 IDNDALLDICGRNLPI-RPAFKDANDLLAQAVSGITDLIRFPG 192 (192)
T ss_pred EEhHHHHHHHhccCCc-hHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999887776 67999999999999999999999986
No 41
>cd02202 FtsZ_type2 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=99.97 E-value=2.8e-31 Score=294.48 Aligned_cols=282 Identities=17% Similarity=0.237 Sum_probs=220.4
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeecccccccc
Q psy15389 496 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 575 (864)
Q Consensus 496 iItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~~ 575 (864)
|..|.+||||+.|-+++++. +. ..+.+|+||+|+||+|+..++.++.
T Consensus 3 i~viGvGg~G~niv~~l~~~-----~~-------------------------~~~~~~~~~~iavntD~~~L~~l~~--- 49 (349)
T cd02202 3 VLIIGVGQAGGRIVDALNRH-----DK-------------------------RSGFGYCVGALAINTAKNDLKGLKH--- 49 (349)
T ss_pred EEEEEeCCcHHHHHHHHHHh-----CC-------------------------CcCCccceeEEEEECCHHHHHhhhc---
Confidence 88899999999999999871 00 1123589999999999999987754
Q ss_pred cccCCCcceeeccc-----cCcCCCcccccccchhhHHHHHHHHHHhhhccCC--ccceeeEeecCCCccccchHHHHHH
Q psy15389 576 RQLFHPEQLITGKE-----DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG--LQGFLIFHSFGGGTGSGFTSLLMER 648 (864)
Q Consensus 576 ~~lf~~~~~~~~~~-----gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~--lqgf~i~~Sl~GGTGSGlgs~lle~ 648 (864)
.+.++.++.+++ |+|+||. .|++..++..|.||+++|.||. +|+|+++||||||||||+++.+++.
T Consensus 50 --~~~~~ki~~g~~~t~G~GaG~~~~-----~G~~~aee~~e~I~~~le~~~~~~~d~~~i~aglGGGTGsG~~p~iae~ 122 (349)
T cd02202 50 --IPAEDRILIGQSEVKGHGVGADRE-----LGAEVAEEDLEEVMRAIDDRGTSDADAILVIAGLGGGTGSGGAPVLAKE 122 (349)
T ss_pred --CCCCCEEEecCcccCCCCCCCChH-----HHHHHHHHHHHHHHHHHhccccccccEEEEecccCCCccccHHHHHHHH
Confidence 346778888875 5566654 5699999999999999999997 9999999999999999999999999
Q ss_pred HHhhhCCcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhh
Q psy15389 649 LSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 728 (864)
Q Consensus 649 L~deyp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is 728 (864)
++++|| +.+++++++|+. .+.++++||+++++++|.+++|++|+|||++|+++|.. + .+.|+++|++||+.|+
T Consensus 123 lke~~~-~~~~~iv~~P~~--~eg~~~~~NA~~~l~~L~~~~D~viv~dNd~L~~~~~~---~-~~~f~~~N~~Ia~~i~ 195 (349)
T cd02202 123 LKERYE-EPVYALGVLPAR--EEGERYSANAARSLDALSEEADAIILFDNDAWKRKGES---V-EEAYDRINEEIARRIG 195 (349)
T ss_pred HHHhCC-ccEEEEEEecCC--CCCchhhHHHHHHHHHHHHhCCEEEEEehHHHhhhccc---h-HHHHHHHHHHHHHHHH
Confidence 999999 889999999997 45699999999999999999999999999999998743 2 3789999999999999
Q ss_pred cccccccc-----CCCCccchhhhccCCccCCCccccccccccccccc----------------cccccccCHHHHHHHh
Q psy15389 729 SITASLRF-----DGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE----------------KAYHEQLSVAEITNAC 787 (864)
Q Consensus 729 ~~t~~~rf-----~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~----------------~~~~~~~~~~~l~~~~ 787 (864)
.++++.|| ||.+|.|++++.++|.+. ++.+..++--.... ......-...+.+++.
T Consensus 196 ~l~~~~r~~~~~~~g~invD~~dv~~~L~~~---G~~~iG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~a~~~a 272 (349)
T cd02202 196 LLLRAGEANAGDSVGESVLDASEVINTLSGG---GFATIGYAREDLETGPSDGKFRLREEDDEVDEKESISRITTLARKA 272 (349)
T ss_pred HHHHhhhcccCCCCCeEeccHHHHHHHhccC---CeEEEEEEEEcccccccccccccccccccccccchhhHHHHHHHHH
Confidence 99999999 999999999999999875 67777765111000 0000011244555554
Q ss_pred cCCCCCcccccCCCCccccccccccc---cCChhhHHHHHHhhhcc
Q psy15389 788 FEPANQMVKCDPRHGKYMACCMLYRG---DVVPKDVNAAIATIKTK 830 (864)
Q Consensus 788 ~~~~n~~~~~~~~~~~~ls~~~~~RG---~~~~~~i~~~~~~~~~k 830 (864)
....- +..||....+ .+.+.+-| .++.+++++....+..+
T Consensus 273 ~~~~L-~~~~d~~~A~--~~Li~i~g~~~~l~~~~~~~~~~~i~~~ 315 (349)
T cd02202 273 AYGEL-TVPCDLTSAD--RALIVIAGPPEELSRKGIEDGRKWLDEE 315 (349)
T ss_pred HcCCC-CCCCCcccCc--EEEEEEEeCccccCHHHHHHHHHHHHHH
Confidence 33321 2345554332 23344555 37888999998777654
No 42
>cd02202 FtsZ_type2 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=99.96 E-value=7.1e-30 Score=283.33 Aligned_cols=219 Identities=19% Similarity=0.271 Sum_probs=189.9
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecccc
Q psy15389 3 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 82 (864)
Q Consensus 3 iitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~~ 82 (864)
|..|.+|+||+.|-+++++. +. ..+.+|+||+|+||+|+..+++++.
T Consensus 3 i~viGvGg~G~niv~~l~~~-----~~-------------------------~~~~~~~~~~iavntD~~~L~~l~~--- 49 (349)
T cd02202 3 VLIIGVGQAGGRIVDALNRH-----DK-------------------------RSGFGYCVGALAINTAKNDLKGLKH--- 49 (349)
T ss_pred EEEEEeCCcHHHHHHHHHHh-----CC-------------------------CcCCccceeEEEEECCHHHHHhhhc---
Confidence 78899999999999998761 00 0123689999999999999887644
Q ss_pred cccCCCCccccccc-----ccccccCCcccccccchhhHHHHHHHHHHhhhccCC--CCceeEEeecCCccccChHHHHH
Q psy15389 83 RQLFHPEQLITGKE-----DAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTG--LQGFLIFHSFGGGTGSGFTSLLM 155 (864)
Q Consensus 83 ~~~~~~~~~~~~~~-----gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~--lqgf~i~~sl~GGTGSGlgs~ll 155 (864)
...++.++.+++ |+|++|. .|++..++.+|.||+++|.||. +|+|++++|+|||||||+++.++
T Consensus 50 --~~~~~ki~~g~~~t~G~GaG~~~~-------~G~~~aee~~e~I~~~le~~~~~~~d~~~i~aglGGGTGsG~~p~ia 120 (349)
T cd02202 50 --IPAEDRILIGQSEVKGHGVGADRE-------LGAEVAEEDLEEVMRAIDDRGTSDADAILVIAGLGGGTGSGGAPVLA 120 (349)
T ss_pred --CCCCCEEEecCcccCCCCCCCChH-------HHHHHHHHHHHHHHHHHhccccccccEEEEecccCCCccccHHHHHH
Confidence 346777777764 6677776 5799999999999999999997 99999999999999999999999
Q ss_pred HHHHHHhCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHH
Q psy15389 156 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQI 235 (864)
Q Consensus 156 e~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~ 235 (864)
+.++++|+ +++++++++|+. .+..+++||++++|++|.+++|.+++|||++|+++|.. + .++|+++|++||+.
T Consensus 121 e~lke~~~-~~~~~iv~~P~~--~eg~~~~~NA~~~l~~L~~~~D~viv~dNd~L~~~~~~---~-~~~f~~~N~~Ia~~ 193 (349)
T cd02202 121 KELKERYE-EPVYALGVLPAR--EEGERYSANAARSLDALSEEADAIILFDNDAWKRKGES---V-EEAYDRINEEIARR 193 (349)
T ss_pred HHHHHhCC-ccEEEEEEecCC--CCCchhhHHHHHHHHHHHHhCCEEEEEehHHHhhhccc---h-HHHHHHHHHHHHHH
Confidence 99999998 899999999997 45689999999999999999999999999999998742 2 36899999999999
Q ss_pred Hhhhcccccc-----CCCCCCChhhhhhcCcCCCCcccCcccc
Q psy15389 236 VSSITASLRF-----DGALNVDLTEFQTNLVPYPRIHFPLVTY 273 (864)
Q Consensus 236 i~~~t~~~rf-----~g~~n~dl~~l~~nLvP~P~~~fl~~s~ 273 (864)
|+.++.+.|| +|.+|.|++++.++|-+. .+.+.++
T Consensus 194 i~~l~~~~r~~~~~~~g~invD~~dv~~~L~~~---G~~~iG~ 233 (349)
T cd02202 194 IGLLLRAGEANAGDSVGESVLDASEVINTLSGG---GFATIGY 233 (349)
T ss_pred HHHHHHhhhcccCCCCCeEeccHHHHHHHhccC---CeEEEEE
Confidence 9999999999 999999999999999764 4444454
No 43
>KOG2530|consensus
Probab=99.96 E-value=5.6e-29 Score=268.85 Aligned_cols=238 Identities=21% Similarity=0.327 Sum_probs=176.9
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCc-ccccccCC----CCccccceeeeCCCCceee
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF-NTFFSETG----AGKHVPRAVFVDLEPTVVD 75 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~-~~~F~e~~----~~~~~pRailvDle~~~i~ 75 (864)
|||+|||+|+.+|.+|+||||++...+++..+...+.. .... |++|+.+. ..+|+||+|++|+......
T Consensus 2 rEilTiq~g~~AnfvgtHfwN~Qea~l~~~~d~~~~~~------~~~~ndvlyr~g~~~~~~~tytPRl~l~Dl~g~~g~ 75 (483)
T KOG2530|consen 2 REILTIQVGHFANFVGTHFWNQQEAYLGLATDSEEPPG------ELCPNDVLYRTGRTDHGQITYTPRLLLVDLKGELGT 75 (483)
T ss_pred ceEEEEEeeccccchhhhhcchhhHhhccCCcccCChh------hcCcchhhhhccccccCceeeccceeEEecCccccc
Confidence 89999999999999999999999999998776443222 2222 89999764 3479999999998765432
Q ss_pred eeecc--------------------------------------------------------------c-----ccccCCC
Q psy15389 76 EVRTG--------------------------------------------------------------T-----YRQLFHP 88 (864)
Q Consensus 76 ~~~~~--------------------------------------------------------------~-----~~~~~~~ 88 (864)
....+ + .|..|||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~g~~t~~~~~pr~~~~~~qs~~~~~~~l~~~~~~~i~~e~~~~~~~sv~~WsDFlr~~yHp 155 (483)
T KOG2530|consen 76 LKYQGELYNDSHLGNEDAWKGKLTTIKTEPRDRNPELQSLLSAEAELPELNAEEIEYESDYSLLASVPSWSDFLRNHYHP 155 (483)
T ss_pred cccchhhccchhcccccccccccceeccccccCChHHhhhccccCcccccchhhhccccccccccccchHHHHHHhhcCc
Confidence 11000 0 1455666
Q ss_pred Ccccccc-----cccccccCCccccccc-chhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHHh
Q psy15389 89 EQLITGK-----EDAARQIGEYSGHYTI-GKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 162 (864)
Q Consensus 89 ~~~~~~~-----~gsgnn~a~~~G~~~~-G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~dey 162 (864)
+.+..-+ .++-++|. -|+-.. ...+.+++.|+||.+||+||.+|||+++.++.+|+| |+++.++|.|+|||
T Consensus 156 ~tl~~l~~~~~d~~a~~~y~--iG~d~f~E~s~~eE~~DrLr~~VEECD~lQGFq~l~Did~Gfg-G~as~~le~l~DEy 232 (483)
T KOG2530|consen 156 RTLNPLNGLFQDSGAFDRYS--IGYDVFTENSYQEEFCDRLRFYVEECDTLQGFQLLSDIDDGFG-GFASKLLEELQDEY 232 (483)
T ss_pred cccccCCccccChHHhhccc--cchhhhhccchhHHHHHHHHHHHHhcccccceEEEEecCCCch-hHHHHHHHHHHHhh
Confidence 6554322 22334455 443221 123678999999999999999999999999999996 99999999999999
Q ss_pred CCcceeEEEEecCCC-CCccccc------chhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHH
Q psy15389 163 GKKSKLEFAIYPAPQ-VSTAVVE------PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQI 235 (864)
Q Consensus 163 p~~~i~~~~v~P~~~-~~~~~v~------~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~ 235 (864)
+++.+++++..|-+. .++.... ..|.+|++.+|.+.|++++|+.--... . .-.+..+++|.+
T Consensus 233 s~~~v~tw~~~~~p~s~~~s~k~ls~~~~~lN~als~~qLs~~~~l~~PL~~~~~~-------~----~~~~tsA~~a~~ 301 (483)
T KOG2530|consen 233 SKKAVFTWGHNPRPFSQDFSMKRLSNKWLKLNKALSLSQLSQECSLYFPLSTASGL-------G----DLWETSAKLARA 301 (483)
T ss_pred cCCceeccccCCCCCCcchhhhhhHHHHHHHHHHHHHHHHhhhcceeecccccccc-------c----cHHHHHHHHHhh
Confidence 999999999999542 2333333 457999999999999999998432211 1 345778999999
Q ss_pred HhhhccccccCCCCCCChhhhhh
Q psy15389 236 VSSITASLRFDGALNVDLTEFQT 258 (864)
Q Consensus 236 i~~~t~~~rf~g~~n~dl~~l~~ 258 (864)
+.++|.|.|.-++-+..+.++++
T Consensus 302 ~ds~tlptr~~ssS~~~~~d~ls 324 (483)
T KOG2530|consen 302 FDSITLPTRLISSSNLRQRDTLS 324 (483)
T ss_pred cccccccceecchhHHHHHHHHH
Confidence 99999999998876666666544
No 44
>cd02191 FtsZ FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=99.95 E-value=9.8e-28 Score=261.34 Aligned_cols=270 Identities=17% Similarity=0.211 Sum_probs=203.7
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccccc
Q psy15389 495 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 574 (864)
Q Consensus 495 EiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~ 574 (864)
-|..|.+|+||+.+-+++++. ++ .-.+.+.||+|...++.+.. +
T Consensus 2 ~i~viGvGg~G~n~v~~~~~~-----~~------------------------------~~~~~iainTd~~~L~~~~a-~ 45 (303)
T cd02191 2 KIAVIGFGGAGGNIVDKFLEY-----DK------------------------------EGRSAVAVNTDAQDLLGLEA-E 45 (303)
T ss_pred EEEEEEECchHHHHHHHHHHc-----CC------------------------------CCccEEEEECcHHHHhcCCC-C
Confidence 377899999999999999761 00 01467999999988876542 2
Q ss_pred ccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhC
Q psy15389 575 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG 654 (864)
Q Consensus 575 ~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp 654 (864)
.+-++.++ .+...|+|+||+.| ++..++++|+||+++|.||. |++++|+|||||||+++.+++.+++.|+
T Consensus 46 ~ki~iG~~--~t~g~GaG~~~~~G-----~~~a~e~~~~I~~~le~~D~---v~i~aglGGGTGSG~ap~ia~~~ke~~~ 115 (303)
T cd02191 46 NRVLIGQA--RTKGLGAGANPELG-----AEAAEEVQEAIDNIPVHVDM---VFITAGLGGGTGTGGAPVVAEHLKRIGT 115 (303)
T ss_pred cEEecCCc--cccCCCCCCCHHHH-----HHHHHHHHHHHHHHHcCCCE---EEEEeccCCccchhHHHHHHHHHHHhCC
Confidence 22222221 12345899999865 68999999999999999994 8999999999999999999999999995
Q ss_pred CcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccccc
Q psy15389 655 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 734 (864)
Q Consensus 655 ~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~ 734 (864)
.+++|+|.|...|.++++||+.+++++|.+++|++|+|||++|.++|.+ +.++ ++|+.+|++|++.++++|.++
T Consensus 116 ----~~~~vvt~Pf~~Eg~~~~~NA~~~l~~L~~~~D~~iv~dN~~L~~~~~~-~~~~-~af~~~N~~ia~~i~~it~~i 189 (303)
T cd02191 116 ----LTVAVVTLPFSDEGGIRMLNAAEGFQTLVREVDNLMVIPNEKLRQIGEK-ASLE-GAFDHADEVLVRAVGGLFGAI 189 (303)
T ss_pred ----CEEEEEeCCcccCCccchhhHHHHHHHHHHhCCEEEEEehHHHHHHhhc-CChH-HHHHHHHHHHHHHHHHHHHhh
Confidence 4566666665578899999999999999999999999999999999976 7775 599999999999999999999
Q ss_pred ccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCccc-ccCCCCccccccccccc
Q psy15389 735 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK-CDPRHGKYMACCMLYRG 813 (864)
Q Consensus 735 rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~-~~~~~~~~ls~~~~~RG 813 (864)
||||.+|.|++++.+.|- -..+-++..+.+. ..-...+.+++.++. .+.. ++.+..+-+ .+.+.|
T Consensus 190 ~~~g~invD~~dv~~~l~-~~G~a~ig~g~~~---------g~~~~~~a~~~Al~~--pll~~~~~~~A~~~--Lv~i~g 255 (303)
T cd02191 190 EIEGEINVDFADVKNVMD-GGGVAMVGYGSED---------VTNRATEAVRKAALG--PLLLPCEIEGAEGA--LLVMAG 255 (303)
T ss_pred ccCCcccCCHHHHHHHhc-cCCeEEEEEEEec---------CchHHHHHHHHHHhC--CCCCCCCcccCCEE--EEEEEC
Confidence 999999999999987773 3333333222221 112355666666553 2322 444433322 233344
Q ss_pred --cCChhhHHHHHHhhhcc
Q psy15389 814 --DVVPKDVNAAIATIKTK 830 (864)
Q Consensus 814 --~~~~~~i~~~~~~~~~k 830 (864)
+++.+++++.+..++.+
T Consensus 256 ~~~l~~~e~~~~~~~i~~~ 274 (303)
T cd02191 256 PPDLNLKEIERVRKWLEEQ 274 (303)
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 68899999998888665
No 45
>cd02191 FtsZ FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=99.94 E-value=1.3e-26 Score=252.65 Aligned_cols=204 Identities=19% Similarity=0.266 Sum_probs=169.1
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecccc
Q psy15389 3 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 82 (864)
Q Consensus 3 iitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~~ 82 (864)
|..|.+|+||+.+-+++++. ++ .-.+.+.||+|...++.+.. +.
T Consensus 3 i~viGvGg~G~n~v~~~~~~-----~~------------------------------~~~~~iainTd~~~L~~~~a-~~ 46 (303)
T cd02191 3 IAVIGFGGAGGNIVDKFLEY-----DK------------------------------EGRSAVAVNTDAQDLLGLEA-EN 46 (303)
T ss_pred EEEEEECchHHHHHHHHHHc-----CC------------------------------CCccEEEEECcHHHHhcCCC-Cc
Confidence 67899999999999998760 00 01478999999888776542 22
Q ss_pred cccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHHh
Q psy15389 83 RQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 162 (864)
Q Consensus 83 ~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~dey 162 (864)
+-++.++- +...|+|+||+ .|++..++++|+||+.+|.||. |++++|+|||||||+++.+++.+++.|
T Consensus 47 ki~iG~~~--t~g~GaG~~~~-------~G~~~a~e~~~~I~~~le~~D~---v~i~aglGGGTGSG~ap~ia~~~ke~~ 114 (303)
T cd02191 47 RVLIGQAR--TKGLGAGANPE-------LGAEAAEEVQEAIDNIPVHVDM---VFITAGLGGGTGTGGAPVVAEHLKRIG 114 (303)
T ss_pred EEecCCcc--ccCCCCCCCHH-------HHHHHHHHHHHHHHHHHcCCCE---EEEEeccCCccchhHHHHHHHHHHHhC
Confidence 22222221 23458999999 4579999999999999999994 899999999999999999999999999
Q ss_pred CCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhccc
Q psy15389 163 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 242 (864)
Q Consensus 163 p~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~~ 242 (864)
+ ..++++++|+ ..|..+++||+.++|++|.+++|++++|||++|.++|.+ +.++. +|+.+|++||+.++++|..
T Consensus 115 ~--~~~~vvt~Pf--~~Eg~~~~~NA~~~l~~L~~~~D~~iv~dN~~L~~~~~~-~~~~~-af~~~N~~ia~~i~~it~~ 188 (303)
T cd02191 115 T--LTVAVVTLPF--SDEGGIRMLNAAEGFQTLVREVDNLMVIPNEKLRQIGEK-ASLEG-AFDHADEVLVRAVGGLFGA 188 (303)
T ss_pred C--CEEEEEeCCc--ccCCccchhhHHHHHHHHHHhCCEEEEEehHHHHHHhhc-CChHH-HHHHHHHHHHHHHHHHHHh
Confidence 5 4444444444 478899999999999999999999999999999999976 77754 8999999999999999999
Q ss_pred cccCCCCCCChhhhhhcC
Q psy15389 243 LRFDGALNVDLTEFQTNL 260 (864)
Q Consensus 243 ~rf~g~~n~dl~~l~~nL 260 (864)
+|+||.+|.|++++.+.|
T Consensus 189 i~~~g~invD~~dv~~~l 206 (303)
T cd02191 189 IEIEGEINVDFADVKNVM 206 (303)
T ss_pred hccCCcccCCHHHHHHHh
Confidence 999999999999998766
No 46
>TIGR00065 ftsZ cell division protein FtsZ. This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis.
Probab=99.92 E-value=1.3e-25 Score=248.37 Aligned_cols=273 Identities=16% Similarity=0.215 Sum_probs=194.9
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccccc
Q psy15389 495 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 574 (864)
Q Consensus 495 EiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~ 574 (864)
-|..|.+|+||+.+-+++++. ++ .-...+.+|+|...++.+...
T Consensus 19 ~i~viGvGg~G~n~v~~l~~~-----~~------------------------------~~~~~iainTD~~~L~~~~a~- 62 (349)
T TIGR00065 19 KIKVIGVGGGGNNTVNRMLEE-----GV------------------------------EGVEFIAINTDAQHLKTTKAD- 62 (349)
T ss_pred eEEEEEeCCcHHHHHHHHHHc-----CC------------------------------CceEEEEEECCHHHHhcCCCC-
Confidence 588999999999999998772 00 024568899988777665421
Q ss_pred ccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhC
Q psy15389 575 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG 654 (864)
Q Consensus 575 ~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp 654 (864)
.+-++.++ .+.-.|+|+||+. |++..++.+|.||+.+|.||.+ +++||+|||||||+++.+++.+++ |+
T Consensus 63 ~ki~iG~~--~t~G~GaG~~~~~-----G~~~aee~~d~Ir~~le~~D~v---fI~aglGGGTGSG~apvia~~ake-~~ 131 (349)
T TIGR00065 63 KKILIGKK--LTRGLGAGGNPEI-----GRKAAEESRDEIRKLLEGADMV---FITAGMGGGTGTGAAPVVAKIAKE-LG 131 (349)
T ss_pred eEEEcCCC--CCCCCCCCCCHHH-----HHHHHHHHHHHHHHHHhCCCEE---EEEEeccCccchhHHHHHHHHHHH-cC
Confidence 12222221 1222488999885 5899999999999999999985 999999999999999966666554 64
Q ss_pred CcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccccc
Q psy15389 655 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 734 (864)
Q Consensus 655 ~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~ 734 (864)
+. +++|+|.|...|..+++||+.++|++|.+++|++|++||++|.++|.+ +.+.. .|+.+|++|++.++++|.++
T Consensus 132 -~l--~vaivt~Pf~~Eg~~r~~nA~~~l~~L~~~~D~vividNd~L~~~~~~-~~i~~-af~~~N~iia~~i~~it~~i 206 (349)
T TIGR00065 132 -AL--TVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIPNDKLLEVVPN-LPLND-AFKVADDVLVRAVKGISELI 206 (349)
T ss_pred -CC--EEEEEeCCccccchhhHHHHHHHHHHHHHhCCEEEEEeCHHHHHhhcC-CCHHH-HHHHHHHHHHHHHHhHHHhh
Confidence 34 445544444478899999999999999999999999999999999977 77755 99999999999999999999
Q ss_pred ccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCccccc-CCCCccccccccccc
Q psy15389 735 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCD-PRHGKYMACCMLYRG 813 (864)
Q Consensus 735 rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~-~~~~~~ls~~~~~RG 813 (864)
||||.+|.|+.++.+-|-- +..-++...-+.- .. ......+-+++.++. .|...+ ....+-+- +.+.|
T Consensus 207 r~~g~iNvDf~dv~~vl~~-~G~a~iG~g~~~g---~~---~~~r~~~A~~~al~~--pLl~~~~i~~A~~~L--v~i~~ 275 (349)
T TIGR00065 207 TKPGLINIDFADVRAVMSG-GGVAMMGIGEALG---ED---TANRAFEAVRKALSS--PLLDVDKISGAKGAL--VHITG 275 (349)
T ss_pred ccCCcCcCCHHHHHHHHhc-CCeEEEEEEEecC---Cc---chHHHHHHHHHHHhC--CCcCCcccccccEEE--EEEEc
Confidence 9999999999999876633 3333433332211 00 000244445554433 233222 33323222 22333
Q ss_pred --cCChhhHHHHHHhhhcc
Q psy15389 814 --DVVPKDVNAAIATIKTK 830 (864)
Q Consensus 814 --~~~~~~i~~~~~~~~~k 830 (864)
+++..|+++.+..++.+
T Consensus 276 ~~~l~l~ev~~~~~~i~~~ 294 (349)
T TIGR00065 276 GADLTLLEAEEIQEIITSE 294 (349)
T ss_pred CCCCCHHHHHHHHHHHHHh
Confidence 68899999998887764
No 47
>KOG2530|consensus
Probab=99.92 E-value=1.8e-25 Score=241.80 Aligned_cols=240 Identities=23% Similarity=0.362 Sum_probs=172.2
Q ss_pred ceeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccC----CCCCcccceeEeCCCCCeec
Q psy15389 493 SRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET----GAGKHVPRAVFVDLEPTVVD 568 (864)
Q Consensus 493 ~rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~----~~~~~~pRailiD~e~~~i~ 568 (864)
||||+|||+|+..|.+|+||||++..-.++.++...+....+ .+ +++++.. +.-+|+||+|++|+....-.
T Consensus 1 mrEilTiq~g~~AnfvgtHfwN~Qea~l~~~~d~~~~~~~~~----~n-dvlyr~g~~~~~~~tytPRl~l~Dl~g~~g~ 75 (483)
T KOG2530|consen 1 MREILTIQVGHFANFVGTHFWNQQEAYLGLATDSEEPPGELC----PN-DVLYRTGRTDHGQITYTPRLLLVDLKGELGT 75 (483)
T ss_pred CceEEEEEeeccccchhhhhcchhhHhhccCCcccCChhhcC----cc-hhhhhccccccCceeeccceeEEecCccccc
Confidence 899999999999999999999999998888777555433221 11 7888863 34489999999997553221
Q ss_pred cc----------------ccc---------------------------------------------------cccccCCC
Q psy15389 569 EV----------------RTG---------------------------------------------------TYRQLFHP 581 (864)
Q Consensus 569 ~i----------------~~~---------------------------------------------------~~~~lf~~ 581 (864)
.. +.| -.+..|||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~g~~t~~~~~pr~~~~~~qs~~~~~~~l~~~~~~~i~~e~~~~~~~sv~~WsDFlr~~yHp 155 (483)
T KOG2530|consen 76 LKYQGELYNDSHLGNEDAWKGKLTTIKTEPRDRNPELQSLLSAEAELPELNAEEIEYESDYSLLASVPSWSDFLRNHYHP 155 (483)
T ss_pred cccchhhccchhcccccccccccceeccccccCChHHhhhccccCcccccchhhhccccccccccccchHHHHHHhhcCc
Confidence 10 000 01233455
Q ss_pred cceeecc-----ccCcCCCcccccccch-hhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhCC
Q psy15389 582 EQLITGK-----EDAANNYARGHYTIGK-EIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGK 655 (864)
Q Consensus 582 ~~~~~~~-----~gagnnwa~G~~~~G~-~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~ 655 (864)
+.+.--+ .++-++|..|+-..-+ .+.+++.|+||.++|+||.+|||+++.++.+|+| |+++.++|.|+|||++
T Consensus 156 ~tl~~l~~~~~d~~a~~~y~iG~d~f~E~s~~eE~~DrLr~~VEECD~lQGFq~l~Did~Gfg-G~as~~le~l~DEys~ 234 (483)
T KOG2530|consen 156 RTLNPLNGLFQDSGAFDRYSIGYDVFTENSYQEEFCDRLRFYVEECDTLQGFQLLSDIDDGFG-GFASKLLEELQDEYSK 234 (483)
T ss_pred cccccCCccccChHHhhccccchhhhhccchhHHHHHHHHHHHHhcccccceEEEEecCCCch-hHHHHHHHHHHHhhcC
Confidence 4433222 1222444444322211 3678899999999999999999999999999996 9999999999999999
Q ss_pred cceEEEEEecCCC-CCCcccc------hhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhh
Q psy15389 656 KSKLEFAIYPAPQ-VSTAVVE------PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 728 (864)
Q Consensus 656 ~~i~~~~v~P~~~-~~~~~v~------~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is 728 (864)
+.+++++..|.+. .++.... ..|.+|++++|.+.|+..+|+.--. .++ .....-.++|.++.
T Consensus 235 ~~v~tw~~~~~p~s~~~s~k~ls~~~~~lN~als~~qLs~~~~l~~PL~~~~-------~~~----~~~~tsA~~a~~~d 303 (483)
T KOG2530|consen 235 KAVFTWGHNPRPFSQDFSMKRLSNKWLKLNKALSLSQLSQECSLYFPLSTAS-------GLG----DLWETSAKLARAFD 303 (483)
T ss_pred CceeccccCCCCCCcchhhhhhHHHHHHHHHHHHHHHHhhhcceeecccccc-------ccc----cHHHHHHHHHhhcc
Confidence 9999999999542 2333322 4579999999999999999973221 111 24566788999999
Q ss_pred ccccccccCCCCccchhhhcc
Q psy15389 729 SITASLRFDGALNVDLTEFQT 749 (864)
Q Consensus 729 ~~t~~~rf~g~~~~dl~~l~~ 749 (864)
++|.|.|.-++-+.-+.++++
T Consensus 304 s~tlptr~~ssS~~~~~d~ls 324 (483)
T KOG2530|consen 304 SITLPTRLISSSNLRQRDTLS 324 (483)
T ss_pred cccccceecchhHHHHHHHHH
Confidence 999999988875555555544
No 48
>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=99.92 E-value=3.3e-25 Score=242.68 Aligned_cols=270 Identities=16% Similarity=0.229 Sum_probs=197.1
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeecccccccc
Q psy15389 496 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 575 (864)
Q Consensus 496 iItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~~ 575 (864)
|..|.+|+||+.+-+++++. ++ + -...+.+|+|...++.+.. +.
T Consensus 3 i~viGvGg~G~n~v~~l~~~-----~~-----------------------~-------~~~~~a~ntD~~~L~~~~~-~~ 46 (304)
T cd02201 3 IKVIGVGGGGGNAVNRMIES-----GL-----------------------E-------GVEFIAANTDAQALAKSKA-PN 46 (304)
T ss_pred EEEEEeCCcHHHHHHHHHHc-----CC-----------------------C-------CceEEEEECCHHHHhcCCC-Cc
Confidence 67899999999999999871 00 0 1456899998887776543 22
Q ss_pred cccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhCC
Q psy15389 576 RQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGK 655 (864)
Q Consensus 576 ~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~ 655 (864)
+-++.++ .+.-.|+|+||+.| ++..++.+|+||+++|.||.+ +++||+|||||||+++.+++..+ +|+
T Consensus 47 k~~ig~~--~t~g~Gag~~~~~g-----~~~a~~~~~~I~~~l~~~d~v---~i~aglGGGTGSG~ap~ia~~a~-e~g- 114 (304)
T cd02201 47 KIQLGKE--LTRGLGAGGDPEVG-----RKAAEESREEIKEALEGADMV---FITAGMGGGTGTGAAPVIAKIAK-EMG- 114 (304)
T ss_pred EEEcCCC--CCCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhCCCEE---EEeeccCCCcchhHHHHHHHHHH-HcC-
Confidence 3233332 13345899998866 678899999999999999985 99999999999999999776655 565
Q ss_pred cceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhccccccc
Q psy15389 656 KSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLR 735 (864)
Q Consensus 656 ~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~r 735 (864)
+.++++.++|+ ..|..+++||+.+++++|.+++|+++++||++|.++|.+.+.+.. .|+.+|++|++.++++|.++|
T Consensus 115 ~~~~~vvt~Pf--~~Eg~~~~~nA~~~l~~L~~~~d~~ividN~~L~~~~~~~~~i~~-af~~~n~~ia~~i~~it~~~~ 191 (304)
T cd02201 115 ALTVAVVTKPF--SFEGKKRMRQAEEGLEELRKHVDTLIVIPNDKLLEVVDKNLPLLE-AFKLADDVLAQAVKGISDLIT 191 (304)
T ss_pred CCEEEEEeCCc--cccchhHHHHHHHHHHHHHHhCCEEEEEecHHHHHhhccCCCHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 34555555555 467889999999999999999999999999999999988788776 899999999999999999999
Q ss_pred cCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCccc-ccCCCCccccccccccc-
Q psy15389 736 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK-CDPRHGKYMACCMLYRG- 813 (864)
Q Consensus 736 f~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~-~~~~~~~~ls~~~~~RG- 813 (864)
+||.+|.|+.++.+.|-.-. .-++....+. ..-...+-+++.++.. +.. +|.+..+.+- +.+.|
T Consensus 192 ~~g~invD~~dv~~vl~~~G-~a~ig~g~~~---------g~~r~~~Av~~Al~~p--Ll~~~~i~~A~~~L--v~I~~~ 257 (304)
T cd02201 192 KPGLINLDFADVKTVMKNKG-VALMGIGEAS---------GENRAIEAAEKAISSP--LLEDDSISGAKGVL--VNITGG 257 (304)
T ss_pred cCccccCCHHHHHHHhccCC-eEEEEEEEec---------CchHHHHHHHHHHhCc--CcCCCChhcccEEE--EEEEcC
Confidence 99999999999998886433 2222222111 0112444455544432 222 2233323222 22334
Q ss_pred -cCChhhHHHHHHhhhcc
Q psy15389 814 -DVVPKDVNAAIATIKTK 830 (864)
Q Consensus 814 -~~~~~~i~~~~~~~~~k 830 (864)
+++.+|+++.+..++.+
T Consensus 258 ~~l~l~e~~~~~~~i~~~ 275 (304)
T cd02201 258 SDLTLEEVNEAAEIIKEK 275 (304)
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 67889999998888765
No 49
>TIGR00065 ftsZ cell division protein FtsZ. This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis.
Probab=99.92 E-value=9.1e-25 Score=241.62 Aligned_cols=204 Identities=17% Similarity=0.251 Sum_probs=165.9
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecccc
Q psy15389 3 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 82 (864)
Q Consensus 3 iitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~~ 82 (864)
|..|.+|+||+.+-+++++. + ..-...+.+|+|...++.+.. +.
T Consensus 20 i~viGvGg~G~n~v~~l~~~-----~------------------------------~~~~~~iainTD~~~L~~~~a-~~ 63 (349)
T TIGR00065 20 IKVIGVGGGGNNTVNRMLEE-----G------------------------------VEGVEFIAINTDAQHLKTTKA-DK 63 (349)
T ss_pred EEEEEeCCcHHHHHHHHHHc-----C------------------------------CCceEEEEEECCHHHHhcCCC-Ce
Confidence 77899999999999998761 0 012467889988776665432 12
Q ss_pred cccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHHh
Q psy15389 83 RQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 162 (864)
Q Consensus 83 ~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~dey 162 (864)
+-+..++. +.-.|+|++|+ .|++..++.+|+||+.+|.||.+ +|++|+|||||||+++.+++.+++ |
T Consensus 64 ki~iG~~~--t~G~GaG~~~~-------~G~~~aee~~d~Ir~~le~~D~v---fI~aglGGGTGSG~apvia~~ake-~ 130 (349)
T TIGR00065 64 KILIGKKL--TRGLGAGGNPE-------IGRKAAEESRDEIRKLLEGADMV---FITAGMGGGTGTGAAPVVAKIAKE-L 130 (349)
T ss_pred EEEcCCCC--CCCCCCCCCHH-------HHHHHHHHHHHHHHHHHhCCCEE---EEEEeccCccchhHHHHHHHHHHH-c
Confidence 22222221 22348899999 47999999999999999999996 999999999999999977666655 6
Q ss_pred CCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhccc
Q psy15389 163 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 242 (864)
Q Consensus 163 p~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~~ 242 (864)
+ +.+++++++|+. .|..+++||+.++|++|.+++|+++++||++|.++|.+ +.+.. .|+.+|.+||+.+.++|.+
T Consensus 131 ~-~l~vaivt~Pf~--~Eg~~r~~nA~~~l~~L~~~~D~vividNd~L~~~~~~-~~i~~-af~~~N~iia~~i~~it~~ 205 (349)
T TIGR00065 131 G-ALTVAVVTKPFK--FEGLKRRKKAEEGLERLKQAVDTLIVIPNDKLLEVVPN-LPLND-AFKVADDVLVRAVKGISEL 205 (349)
T ss_pred C-CCEEEEEeCCcc--ccchhhHHHHHHHHHHHHHhCCEEEEEeCHHHHHhhcC-CCHHH-HHHHHHHHHHHHHHhHHHh
Confidence 4 555666666664 78899999999999999999999999999999999977 77755 8999999999999999999
Q ss_pred cccCCCCCCChhhhhhcC
Q psy15389 243 LRFDGALNVDLTEFQTNL 260 (864)
Q Consensus 243 ~rf~g~~n~dl~~l~~nL 260 (864)
+|+||.+|.|+.++.+-|
T Consensus 206 ir~~g~iNvDf~dv~~vl 223 (349)
T TIGR00065 206 ITKPGLINIDFADVRAVM 223 (349)
T ss_pred hccCCcCcCCHHHHHHHH
Confidence 999999999999998855
No 50
>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=99.91 E-value=2.3e-24 Score=236.10 Aligned_cols=207 Identities=16% Similarity=0.249 Sum_probs=170.4
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecccc
Q psy15389 3 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 82 (864)
Q Consensus 3 iitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~~ 82 (864)
|..|.+|+||+.+-+++++. ++ . -...+.+|+|...++.+.. +.
T Consensus 3 i~viGvGg~G~n~v~~l~~~-----~~---------------------------~---~~~~~a~ntD~~~L~~~~~-~~ 46 (304)
T cd02201 3 IKVIGVGGGGGNAVNRMIES-----GL---------------------------E---GVEFIAANTDAQALAKSKA-PN 46 (304)
T ss_pred EEEEEeCCcHHHHHHHHHHc-----CC---------------------------C---CceEEEEECCHHHHhcCCC-Cc
Confidence 67899999999999998760 00 0 1467899998887766542 22
Q ss_pred cccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHHh
Q psy15389 83 RQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 162 (864)
Q Consensus 83 ~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~dey 162 (864)
+.++.++. +.-.|+|++|+ .|++..++.+|+||+.+|.||.+ +|++|+|||||||+++.+++..+ +|
T Consensus 47 k~~ig~~~--t~g~Gag~~~~-------~g~~~a~~~~~~I~~~l~~~d~v---~i~aglGGGTGSG~ap~ia~~a~-e~ 113 (304)
T cd02201 47 KIQLGKEL--TRGLGAGGDPE-------VGRKAAEESREEIKEALEGADMV---FITAGMGGGTGTGAAPVIAKIAK-EM 113 (304)
T ss_pred EEEcCCCC--CCCCCCCCCHH-------HHHHHHHHHHHHHHHHHhCCCEE---EEeeccCCCcchhHHHHHHHHHH-Hc
Confidence 33333322 33458999999 45788999999999999999986 99999999999999999777665 56
Q ss_pred CCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhccc
Q psy15389 163 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 242 (864)
Q Consensus 163 p~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~~ 242 (864)
+ +.+++++++|+. .|..+++||+.++|++|.+++|.++++||++|.++|.+.+.+.. .|+.+|++|++.+.++|.+
T Consensus 114 g-~~~~~vvt~Pf~--~Eg~~~~~nA~~~l~~L~~~~d~~ividN~~L~~~~~~~~~i~~-af~~~n~~ia~~i~~it~~ 189 (304)
T cd02201 114 G-ALTVAVVTKPFS--FEGKKRMRQAEEGLEELRKHVDTLIVIPNDKLLEVVDKNLPLLE-AFKLADDVLAQAVKGISDL 189 (304)
T ss_pred C-CCEEEEEeCCcc--ccchhHHHHHHHHHHHHHHhCCEEEEEecHHHHHhhccCCCHHH-HHHHHHHHHHHHHHHHHHH
Confidence 5 466666666765 67789999999999999999999999999999999988788877 7999999999999999999
Q ss_pred cccCCCCCCChhhhhhcCcC
Q psy15389 243 LRFDGALNVDLTEFQTNLVP 262 (864)
Q Consensus 243 ~rf~g~~n~dl~~l~~nLvP 262 (864)
+|+||.+|+|+.++.+.|-.
T Consensus 190 ~~~~g~invD~~dv~~vl~~ 209 (304)
T cd02201 190 ITKPGLINLDFADVKTVMKN 209 (304)
T ss_pred hccCccccCCHHHHHHHhcc
Confidence 99999999999999987753
No 51
>PRK13018 cell division protein FtsZ; Provisional
Probab=99.90 E-value=2e-23 Score=231.51 Aligned_cols=270 Identities=19% Similarity=0.263 Sum_probs=201.8
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccccc
Q psy15389 495 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 574 (864)
Q Consensus 495 EiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~ 574 (864)
-|..|.||+||+.+-+++++. ++ . -...|.||+|...++.+...
T Consensus 30 ~I~ViGvGGaG~N~v~~m~~~-----~~---------------------------~---~v~~iaiNTD~q~L~~~~a~- 73 (378)
T PRK13018 30 KIVVVGCGGAGNNTINRLYEI-----GI---------------------------E---GAETIAINTDAQHLAMIKAD- 73 (378)
T ss_pred eEEEEEeCCcHHHHHHHHHHc-----CC---------------------------C---CceEEEEECCHHHHhcCCCC-
Confidence 488999999999999999861 00 0 03468999988777654332
Q ss_pred ccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhC
Q psy15389 575 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG 654 (864)
Q Consensus 575 ~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp 654 (864)
.+-++.++ ++.-.|+|++|..| ++..++.+|.||+.+|.||. |+|++|||||||||+++.+++.+++ ++
T Consensus 74 ~ki~iG~~--~t~G~GaG~dp~~G-----~~aaee~~d~I~~~le~~D~---vfI~aGLGGGTGSGaapvIa~iake-~g 142 (378)
T PRK13018 74 KKILIGKS--LTRGLGAGGDPEVG-----RKAAEESRDEIKEVLKGADL---VFVTAGMGGGTGTGAAPVVAEIAKE-QG 142 (378)
T ss_pred cEEecCCc--cCCCCCCCCChHHH-----HHHHHHHHHHHHHHhcCCCE---EEEEeeccCcchhhHHHHHHHHHHH-cC
Confidence 12122221 12234788887765 77788999999999999997 8999999999999999999999987 44
Q ss_pred CcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccccc
Q psy15389 655 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 734 (864)
Q Consensus 655 ~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~ 734 (864)
...+++++.|+. .|.....+|+.++|++|.+++|++|+|||++|.++| +.+.+.. .|+.+|++|++.++++|.++
T Consensus 143 -~ltv~vVt~Pf~--~EG~~r~~nA~~gL~~L~e~~D~vividNd~L~~i~-~~~~i~~-af~~~N~iIa~~I~~It~~i 217 (378)
T PRK13018 143 -ALVVGVVTKPFK--FEGRARMQKAEEGIERLREAADTVIVIDNNRLLDIV-PNLPIAD-AFSVADEVIAETVKGITETI 217 (378)
T ss_pred -CCeEEEEEcCcc--cccHhHHHHHHHHHHHHHHhCCEEEEEecHHHHHHH-hcCCHHH-HHHHHHHHHHHHHHhhhhhc
Confidence 556788888986 677889999999999999999999999999999999 7777764 89999999999999999999
Q ss_pred ccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCccccccccccc-
Q psy15389 735 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG- 813 (864)
Q Consensus 735 rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG- 813 (864)
||||.+|.|++++.+-|- -..+-++....+. ..-...+-+++.++.. |+.++....+-+ .+.+.|
T Consensus 218 ~~~G~iN~Df~dv~~vl~-~~G~a~iG~G~a~---------g~~r~~~Av~~Al~sp--LL~~di~~A~~~--Lv~I~g~ 283 (378)
T PRK13018 218 TKPSLINLDFADVKSVMK-GGGVAMMGVGEAK---------GQNRAMEAVRAALANP--LLDVDYRGAKGA--LVHITGG 283 (378)
T ss_pred ccCCceecCHHHHHHHhc-cCCEEEEEEEEec---------CCcHHHHHHHHHHhCC--CcCCChhhhceE--EEEEECC
Confidence 999999999999987663 2333333222211 1223555666665543 345555443322 233445
Q ss_pred -cCChhhHHHHHHhhhcc
Q psy15389 814 -DVVPKDVNAAIATIKTK 830 (864)
Q Consensus 814 -~~~~~~i~~~~~~~~~k 830 (864)
+++..++++.+..++.+
T Consensus 284 ~~l~l~ev~~~~~~i~~~ 301 (378)
T PRK13018 284 PDLTLKEANEAASRITEE 301 (378)
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 68899999998877664
No 52
>PRK13018 cell division protein FtsZ; Provisional
Probab=99.89 E-value=3.1e-23 Score=230.01 Aligned_cols=204 Identities=19% Similarity=0.315 Sum_probs=169.1
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeecccc
Q psy15389 3 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 82 (864)
Q Consensus 3 iitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~~ 82 (864)
|..|.+|+||+.+-+++++. ++ .+ ...|.||+|...++.+... .
T Consensus 31 I~ViGvGGaG~N~v~~m~~~-----~~---------------------------~~---v~~iaiNTD~q~L~~~~a~-~ 74 (378)
T PRK13018 31 IVVVGCGGAGNNTINRLYEI-----GI---------------------------EG---AETIAINTDAQHLAMIKAD-K 74 (378)
T ss_pred EEEEEeCCcHHHHHHHHHHc-----CC---------------------------CC---ceEEEEECCHHHHhcCCCC-c
Confidence 67899999999999998760 00 01 3678899888766554221 1
Q ss_pred cccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHHh
Q psy15389 83 RQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 162 (864)
Q Consensus 83 ~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~dey 162 (864)
+-++.++ .+.-.|+|++|+ .|++..++.+|.||+.+|.||. |+|++|+|||||||+++.+++.+++ +
T Consensus 75 ki~iG~~--~t~G~GaG~dp~-------~G~~aaee~~d~I~~~le~~D~---vfI~aGLGGGTGSGaapvIa~iake-~ 141 (378)
T PRK13018 75 KILIGKS--LTRGLGAGGDPE-------VGRKAAEESRDEIKEVLKGADL---VFVTAGMGGGTGTGAAPVVAEIAKE-Q 141 (378)
T ss_pred EEecCCc--cCCCCCCCCChH-------HHHHHHHHHHHHHHHHhcCCCE---EEEEeeccCcchhhHHHHHHHHHHH-c
Confidence 2222221 123347888888 5688899999999999999998 8999999999999999999999987 5
Q ss_pred CCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhccc
Q psy15389 163 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 242 (864)
Q Consensus 163 p~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~~ 242 (864)
+ ...+++++.|+. .|...+..|+.++|++|.+++|++++|||++|.++| +.+.+.. .|+.+|++||+++.++|.+
T Consensus 142 g-~ltv~vVt~Pf~--~EG~~r~~nA~~gL~~L~e~~D~vividNd~L~~i~-~~~~i~~-af~~~N~iIa~~I~~It~~ 216 (378)
T PRK13018 142 G-ALVVGVVTKPFK--FEGRARMQKAEEGIERLREAADTVIVIDNNRLLDIV-PNLPIAD-AFSVADEVIAETVKGITET 216 (378)
T ss_pred C-CCeEEEEEcCcc--cccHhHHHHHHHHHHHHHHhCCEEEEEecHHHHHHH-hcCCHHH-HHHHHHHHHHHHHHhhhhh
Confidence 3 567888999986 577889999999999999999999999999999999 7777775 7999999999999999999
Q ss_pred cccCCCCCCChhhhhhcC
Q psy15389 243 LRFDGALNVDLTEFQTNL 260 (864)
Q Consensus 243 ~rf~g~~n~dl~~l~~nL 260 (864)
+|+||.+|.|++++.+-|
T Consensus 217 i~~~G~iN~Df~dv~~vl 234 (378)
T PRK13018 217 ITKPSLINLDFADVKSVM 234 (378)
T ss_pred cccCCceecCHHHHHHHh
Confidence 999999999999998765
No 53
>PF03953 Tubulin_C: Tubulin C-terminal domain; InterPro: IPR018316 This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.; GO: 0003924 GTPase activity, 0005525 GTP binding, 0006184 GTP catabolic process, 0051258 protein polymerization, 0043234 protein complex; PDB: 3RYH_A 3RYI_A 3HKE_C 3HKD_C 3HKB_A 3N2K_A 3N2G_A 3HKC_C 3RYF_C 3RYC_A ....
Probab=99.89 E-value=9.9e-24 Score=201.53 Aligned_cols=104 Identities=61% Similarity=1.069 Sum_probs=96.1
Q ss_pred CCccccccccccccccccccccccCHHHHHHHhcCCCCCcccccCCCCccccccccccccCChhhHHHHHHhhhccCccC
Q psy15389 755 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 834 (864)
Q Consensus 755 P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~~~k~~~~ 834 (864)
||+|||++||+|++...+..+++.++.||++++|+++|+|++|||++|+||||++++||+++++||++++.++|.|.+++
T Consensus 1 PrlHFl~~s~aP~~~~~~~~~~~~s~~~l~~~lf~~~n~m~~~~~~~gkyla~~~l~RG~v~~~di~~~i~~ik~~~~~~ 80 (126)
T PF03953_consen 1 PRLHFLLSSYAPLTSPEDSNYEKLSVQDLTRQLFDPKNQMVSCDPRQGKYLACALLYRGDVSPKDINEAIAKIKQKNSIQ 80 (126)
T ss_dssp TTT-EEEEEESSTSBTTSTTSSCCTHHHHHHHHTSGGGBSSSS-TTSS-EEEEEEEEEESSTHHHHHHHHHHHHCTSTTS
T ss_pred CCeeeecCccccccccchhhhhcccHhHhhHHHHhhhhhccccccccchhhhhhhccccccccchhhhHHHhhhhccccc
Confidence 89999999999999988888899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCceEEEeCCCCCCCCCC
Q psy15389 835 FVDWCPTGFKVGINYQPPTVVPGG 858 (864)
Q Consensus 835 fv~W~p~~~k~~~~~~~p~~~~~~ 858 (864)
||+|+|++||||+|++||...+.+
T Consensus 81 Fv~W~p~~~kv~~~~~~p~~~~~s 104 (126)
T PF03953_consen 81 FVDWIPTGFKVGICKVPPYGQPNS 104 (126)
T ss_dssp B-SSSTTCEEEEEESS-STSTTTS
T ss_pred eeeecCchhhcccccCCCcccCCC
Confidence 999999999999999999998887
No 54
>PF03953 Tubulin_C: Tubulin C-terminal domain; InterPro: IPR018316 This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.; GO: 0003924 GTPase activity, 0005525 GTP binding, 0006184 GTP catabolic process, 0051258 protein polymerization, 0043234 protein complex; PDB: 3RYH_A 3RYI_A 3HKE_C 3HKD_C 3HKB_A 3N2K_A 3N2G_A 3HKC_C 3RYF_C 3RYC_A ....
Probab=99.86 E-value=4.9e-22 Score=189.88 Aligned_cols=126 Identities=60% Similarity=1.019 Sum_probs=114.1
Q ss_pred CCcccCccccccccchhhhhhcccCHHHHHHHhcCCCCceeecCCCCCchhhhhhhhcCCCChHHHHHHHHHhhccCccc
Q psy15389 264 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 343 (864)
Q Consensus 264 P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~~~~~~~~ 343 (864)
|++||++++++|++...+..++..++.+|++++|++.++|++++|.+|+|||+++++||+++++++.+.+.+++.+..++
T Consensus 1 PrlHFl~~s~aP~~~~~~~~~~~~s~~~l~~~lf~~~n~m~~~~~~~gkyla~~~l~RG~v~~~di~~~i~~ik~~~~~~ 80 (126)
T PF03953_consen 1 PRLHFLLSSYAPLTSPEDSNYEKLSVQDLTRQLFDPKNQMVSCDPRQGKYLACALLYRGDVSPKDINEAIAKIKQKNSIQ 80 (126)
T ss_dssp TTT-EEEEEESSTSBTTSTTSSCCTHHHHHHHHTSGGGBSSSS-TTSS-EEEEEEEEEESSTHHHHHHHHHHHHCTSTTS
T ss_pred CCeeeecCccccccccchhhhhcccHhHhhHHHHhhhhhccccccccchhhhhhhccccccccchhhhHHHhhhhccccc
Confidence 89999999999999988888899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCceEEEecCCCcccCCCCcccccceEEEeeccHHHHHHHHHHHH
Q psy15389 344 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 394 (864)
Q Consensus 344 f~~W~p~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsNst~i~~~l~~l~~ 394 (864)
|++|+|+++|+++|++||...+.+ ++++++|+|+|+|.++|+++.+
T Consensus 81 Fv~W~p~~~kv~~~~~~p~~~~~s-----~~s~~~LsNsTaI~~~f~~i~~ 126 (126)
T PF03953_consen 81 FVDWIPTGFKVGICKVPPYGQPNS-----DRSGLMLSNSTAIAEVFSRISH 126 (126)
T ss_dssp B-SSSTTCEEEEEESS-STSTTTS-----SEEEEEEEEEGGGHHHHHHHHH
T ss_pred eeeecCchhhcccccCCCcccCCC-----cceEEEeCChHHHHHHHHHhcC
Confidence 999999999999999999876643 5789999999999999999863
No 55
>PRK09330 cell division protein FtsZ; Validated
Probab=99.85 E-value=3.3e-21 Score=214.03 Aligned_cols=206 Identities=17% Similarity=0.279 Sum_probs=164.8
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCCCCccccceeeeCCCCceeeeeeccc
Q psy15389 2 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 81 (864)
Q Consensus 2 Eiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailvDle~~~i~~~~~~~ 81 (864)
-|..|.+|+||+.+-+++++. ++ .+ ...|.+|+|...++.+.. +
T Consensus 15 ~IkViGvGG~G~Nav~~m~~~-----~~---------------------------~~---v~fia~NTD~q~L~~~~a-~ 58 (384)
T PRK09330 15 VIKVIGVGGGGGNAVNRMIEE-----GI---------------------------QG---VEFIAANTDAQALLKSKA-P 58 (384)
T ss_pred eEEEEEECCcHHHHHHHHHHc-----CC---------------------------CC---ceEEEEeCcHHHHhcCCC-C
Confidence 377899999999999998761 00 01 256888888776654322 1
Q ss_pred ccccCCCCcccccccccccccCCcccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHH
Q psy15389 82 YRQLFHPEQLITGKEDAARQIGEYSGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 161 (864)
Q Consensus 82 ~~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~de 161 (864)
.+-+..++ .+.-.|+|++|. .|++..++.+|.||+.+|.||.+ +|++++|||||||.++. +..+..+
T Consensus 59 ~ki~lG~~--~t~GlGaG~~pe-------~G~~aaee~~e~I~~~l~~~D~v---fI~AGmGGGTGTGaapv-IA~iake 125 (384)
T PRK09330 59 VKIQLGEK--LTRGLGAGANPE-------VGRKAAEESREEIREALEGADMV---FITAGMGGGTGTGAAPV-VAEIAKE 125 (384)
T ss_pred eEEEcCCc--ccccCCCCCCHH-------HHHHHHHHHHHHHHHHHcCCCEE---EEEecCCCcccHHHHHH-HHHHHHH
Confidence 12222221 123348889888 67999999999999999999888 99999999999999995 5556666
Q ss_pred hCCcceeEEEEecCCCCCcccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhcc
Q psy15389 162 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 241 (864)
Q Consensus 162 yp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~ 241 (864)
|+ +++++|+|.+...|..+++||+.++|+.|.+++|.+++++|++|.+++.+.+.+.. .|+.+|.+|++.+.+++.
T Consensus 126 ~g---~ltvaVvt~PF~fEG~~r~~nA~~gL~~L~~~~D~vIvi~Nd~L~~~~~~~~~l~~-Af~~ad~vL~~~v~~It~ 201 (384)
T PRK09330 126 LG---ILTVAVVTKPFSFEGKKRMKQAEEGIEELRKHVDTLIVIPNDKLLEVVDKKTPLLD-AFKAADDVLRQAVQGITD 201 (384)
T ss_pred cC---CcEEEEEecCccccchhHHHHHHHHHHHHHHHCCEEEEEecHHHHhhccCCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 75 44555555554589999999999999999999999999999999999987777766 899999999999999999
Q ss_pred ccccCCCCCCChhhhhhcC
Q psy15389 242 SLRFDGALNVDLTEFQTNL 260 (864)
Q Consensus 242 ~~rf~g~~n~dl~~l~~nL 260 (864)
.+++||.+|.|+.++.+-|
T Consensus 202 ~i~~pG~iNvDfaDvk~vm 220 (384)
T PRK09330 202 LITKPGLINLDFADVKTVM 220 (384)
T ss_pred HHhcCCcccCCHHHHHHHH
Confidence 9999999999999988755
No 56
>PRK09330 cell division protein FtsZ; Validated
Probab=99.84 E-value=3.4e-21 Score=214.00 Aligned_cols=273 Identities=16% Similarity=0.208 Sum_probs=196.1
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccceeEeCCCCCeeccccccc
Q psy15389 495 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 574 (864)
Q Consensus 495 EiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRailiD~e~~~i~~i~~~~ 574 (864)
.|..|.||+||+.+=+++++. ++ . -...|.+++|...++.+...
T Consensus 15 ~IkViGvGG~G~Nav~~m~~~-----~~-----------------------~-------~v~fia~NTD~q~L~~~~a~- 58 (384)
T PRK09330 15 VIKVIGVGGGGGNAVNRMIEE-----GI-----------------------Q-------GVEFIAANTDAQALLKSKAP- 58 (384)
T ss_pred eEEEEEECCcHHHHHHHHHHc-----CC-----------------------C-------CceEEEEeCcHHHHhcCCCC-
Confidence 588999999999999998771 00 0 02458899988777654322
Q ss_pred ccccCCCcceeeccccCcCCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhC
Q psy15389 575 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG 654 (864)
Q Consensus 575 ~~~lf~~~~~~~~~~gagnnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp 654 (864)
.+-+..++ ++.-.|+|+||.. |++..++..|.||+.+|.||.+ +|+++||||||||.++ ++..+..+|+
T Consensus 59 ~ki~lG~~--~t~GlGaG~~pe~-----G~~aaee~~e~I~~~l~~~D~v---fI~AGmGGGTGTGaap-vIA~iake~g 127 (384)
T PRK09330 59 VKIQLGEK--LTRGLGAGANPEV-----GRKAAEESREEIREALEGADMV---FITAGMGGGTGTGAAP-VVAEIAKELG 127 (384)
T ss_pred eEEEcCCc--ccccCCCCCCHHH-----HHHHHHHHHHHHHHHHcCCCEE---EEEecCCCcccHHHHH-HHHHHHHHcC
Confidence 12122221 1223488888874 5899999999999999999988 9999999999999999 5666666775
Q ss_pred CcceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccccc
Q psy15389 655 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 734 (864)
Q Consensus 655 ~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~ 734 (864)
+++++|+|.|...|..+++||+.++|++|.+++|++|++||++|.+++.+.+.+.. .|+.+|++|++.+.++|..+
T Consensus 128 ---~ltvaVvt~PF~fEG~~r~~nA~~gL~~L~~~~D~vIvi~Nd~L~~~~~~~~~l~~-Af~~ad~vL~~~v~~It~~i 203 (384)
T PRK09330 128 ---ILTVAVVTKPFSFEGKKRMKQAEEGIEELRKHVDTLIVIPNDKLLEVVDKKTPLLD-AFKAADDVLRQAVQGITDLI 203 (384)
T ss_pred ---CcEEEEEecCccccchhHHHHHHHHHHHHHHHCCEEEEEecHHHHhhccCCCCHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 56677776666689999999999999999999999999999999999987777766 89999999999999999999
Q ss_pred ccCCCCccchhhhccCCccCCCccccccccccccccccccccccCHHHHHHHhcCCCCCccc-ccCCCCccccccccccc
Q psy15389 735 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK-CDPRHGKYMACCMLYRG 813 (864)
Q Consensus 735 rf~g~~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~-~~~~~~~~ls~~~~~RG 813 (864)
++||.+|.|+.++.+-|-- ...-++....+. ..-...+-+++.++. .|.. ++....+-+-+.+..--
T Consensus 204 ~~pG~iNvDfaDvk~vm~~-~G~a~~G~G~a~---------g~~ra~~A~~~Ai~s--pLl~~~~i~~A~~vLv~I~g~~ 271 (384)
T PRK09330 204 TKPGLINLDFADVKTVMSE-MGLAMMGIGEAS---------GEDRAREAAEKAISS--PLLEDVDISGAKGVLVNITGGP 271 (384)
T ss_pred hcCCcccCCHHHHHHHHhc-CCeEEEEEEEec---------CccHHHHHHHHHHhC--cCcCCCChhhcceEEEEEECCC
Confidence 9999999999998775542 222233222221 112234444444432 2222 33332232222222222
Q ss_pred cCChhhHHHHHHhhhcc
Q psy15389 814 DVVPKDVNAAIATIKTK 830 (864)
Q Consensus 814 ~~~~~~i~~~~~~~~~k 830 (864)
+++..|+++.+..++.+
T Consensus 272 ~l~l~e~~~~~~~i~~~ 288 (384)
T PRK09330 272 DLTLFEVEEAAEIIREA 288 (384)
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 68899999998887665
No 57
>PF14881 Tubulin_3: Tubulin domain
Probab=99.80 E-value=2.1e-19 Score=181.00 Aligned_cols=151 Identities=22% Similarity=0.357 Sum_probs=109.6
Q ss_pred cccCCCCcccccccccccccCCcccccccchhh------HHHHHHH-HHHhhhccCCCCceeEEeecCCccccChHHHHH
Q psy15389 83 RQLFHPEQLITGKEDAARQIGEYSGHYTIGKEI------VDLVLDR-IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLM 155 (864)
Q Consensus 83 ~~~~~~~~~~~~~~gsgnn~a~~~G~~~~G~~~------~e~~~d~-iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~ll 155 (864)
+-.|+|+++..-++...|.......-|..|.+. .+++.|+ ||+++|+||+|||||++.++.+|+| |+++.++
T Consensus 17 r~~yhPrSl~~l~~~~~~~~~~~Fd~f~~G~~~f~~~~~~~d~~D~~lR~f~EECD~lQGfQ~~~d~d~gwg-Gfas~~L 95 (180)
T PF14881_consen 17 RVHYHPRSLNQLNDYEHNSPNMPFDTFGVGQELFKSLDYEEDFFDRDLRFFLEECDSLQGFQVLTDVDDGWG-GFASSLL 95 (180)
T ss_pred cceeCCCceEEcCccccCCCCCCcccccchHHHHhhhhhhhHHHHHHHHHHHHHcccccceEEEecCCCchH-hHHHHHH
Confidence 455666666554432222111001113344443 3456665 9999999999999999999999997 9999999
Q ss_pred HHHHHHhCCcce-eEEEEecCCCCCc-----ccccchhhHHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHH
Q psy15389 156 ERLSVDYGKKSK-LEFAIYPAPQVST-----AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 229 (864)
Q Consensus 156 e~L~deyp~~~i-~~~~v~P~~~~~~-----~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N 229 (864)
|+|+|||||+.+ +.+++.+...... ...+..|+++++.+|.++|++++|+... . +..+..+..
T Consensus 96 e~L~DEy~k~~i~~~~~~~~~~~~~~~~~~~~~~~~~N~a~s~~~L~~~ssl~vPl~~~----------~-d~~s~~htS 164 (180)
T PF14881_consen 96 EHLRDEYPKKPIIWVWGLRDPSSSSRDAPRKRRLRLLNKALSLSELSEQSSLFVPLSTL----------S-DASSNWHTS 164 (180)
T ss_pred HHHHHHcCCCceEEeecCCCccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEecCCC----------C-cCCCcHHHH
Confidence 999999999996 5555554432111 1245689999999999999999999721 0 234667999
Q ss_pred HHHHHHHhhhcccccc
Q psy15389 230 RLIGQIVSSITASLRF 245 (864)
Q Consensus 230 ~lia~~i~~~t~~~rf 245 (864)
+++|.+|.++|.|+|.
T Consensus 165 ai~A~aidT~TLp~RL 180 (180)
T PF14881_consen 165 AILAAAIDTITLPYRL 180 (180)
T ss_pred HHHHHHHHhccccCCC
Confidence 9999999999999984
No 58
>PF14881 Tubulin_3: Tubulin domain
Probab=99.68 E-value=1e-16 Score=161.56 Aligned_cols=118 Identities=23% Similarity=0.374 Sum_probs=95.6
Q ss_pred HHHHHHH-HHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhCCcce-EEEEEecCCCCCC-----cccchhhH
Q psy15389 607 VDLVLDR-IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSK-LEFAIYPAPQVST-----AVVEPYNS 679 (864)
Q Consensus 607 ~~~~~d~-ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~~~i-~~~~v~P~~~~~~-----~~v~~YNs 679 (864)
.++++|+ ||.++|+||.+||||++.++.+|+| |+++.++|+|+|||||+.+ +.+.+.+...... ...+..|.
T Consensus 56 ~~d~~D~~lR~f~EECD~lQGfQ~~~d~d~gwg-Gfas~~Le~L~DEy~k~~i~~~~~~~~~~~~~~~~~~~~~~~~~N~ 134 (180)
T PF14881_consen 56 EEDFFDRDLRFFLEECDSLQGFQVLTDVDDGWG-GFASSLLEHLRDEYPKKPIIWVWGLRDPSSSSRDAPRKRRLRLLNK 134 (180)
T ss_pred hhHHHHHHHHHHHHHcccccceEEEecCCCchH-hHHHHHHHHHHHHcCCCceEEeecCCCccccccchhhHHHHHHHHH
Confidence 3456665 9999999999999999999999997 9999999999999999996 5565554432111 12456899
Q ss_pred HHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhcccccccc
Q psy15389 680 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 736 (864)
Q Consensus 680 ~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~rf 736 (864)
++++.+|.++|++++|+... . +..+..+.-.++|.+|.++|.+.|.
T Consensus 135 a~s~~~L~~~ssl~vPl~~~----------~-d~~s~~htSai~A~aidT~TLp~RL 180 (180)
T PF14881_consen 135 ALSLSELSEQSSLFVPLSTL----------S-DASSNWHTSAILAAAIDTITLPYRL 180 (180)
T ss_pred HHHHHHHHhhCCEEEecCCC----------C-cCCCcHHHHHHHHHHHHhccccCCC
Confidence 99999999999999999720 0 2234568899999999999999984
No 59
>COG0206 FtsZ Cell division GTPase [Cell division and chromosome partitioning]
Probab=99.35 E-value=4.2e-12 Score=138.67 Aligned_cols=145 Identities=17% Similarity=0.236 Sum_probs=127.4
Q ss_pred cccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHHhCCcceeEEEEecCCCCCcccccchhh
Q psy15389 109 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 188 (864)
Q Consensus 109 ~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt 188 (864)
...|++..++..+.|++.++..| -++++.++|||||+|.++.+++.+++ .+...++++++|+. .|.....-|+
T Consensus 75 P~vG~~aAee~~~~I~~~l~g~d---mvfitaG~GGGTGtGaaPVvakiake--~g~ltvavvt~Pf~--~EG~~r~~~A 147 (338)
T COG0206 75 PEVGRAAAEESIEEIEEALKGAD---MVFVTAGMGGGTGTGAAPVVAEIAKE--LGALTVAVVTLPFS--FEGSPRMENA 147 (338)
T ss_pred cHHHHHHHHHHHHHHHHHhccCC---eEEEEeeecCCccccccHHHHHHHHh--cCCcEEEEEEecch--hcCchHHHHH
Confidence 44789999999999999998877 45999999999999999999999999 48899999999997 5666778899
Q ss_pred HHHHHHhhhcCCEEEEEechhHHHhhhhcCCCCCCChhhHHHHHHHHHhhhccccccCCCCCCChhhhhhcCcC
Q psy15389 189 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 262 (864)
Q Consensus 189 ~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~lia~~i~~~t~~~rf~g~~n~dl~~l~~nLvP 262 (864)
.-++..|.+++|.+++++|+.|.+... ...+. .+|...|.++++.+.+++..+--||.+|.|+.++.+-|-.
T Consensus 148 ~~gi~~L~~~~DtlIvi~Ndkll~~~~-~~~~~-~Af~~ad~vl~~~v~~i~e~I~~~glinvDfaDv~~vm~~ 219 (338)
T COG0206 148 EEGIEELREVVDTLIVIPNDKLLKGKD-KTPIA-EAFNEADDVLGNAVKGITELITKPGLVNVDFADVRTVMKG 219 (338)
T ss_pred HHHHHHHHHhCCcEEEEecHHHHhccC-cccHH-HHHHHHHHHHHHHHHHHHHHhccCceEeecHHHHHHHHhc
Confidence 999999999999999999999998764 33332 2688899999999999999999999999999998886655
No 60
>COG0206 FtsZ Cell division GTPase [Cell division and chromosome partitioning]
Probab=99.28 E-value=1.8e-11 Score=133.85 Aligned_cols=212 Identities=16% Similarity=0.212 Sum_probs=154.7
Q ss_pred ccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhCCcceEEEEEecCCCCCCcccch
Q psy15389 597 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 676 (864)
Q Consensus 597 ~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~ 676 (864)
.+....|++..++..+.|++.++..| -++++.++|||||+|.++.+.+.+++ .....++++++|+. .|.....
T Consensus 72 Ga~P~vG~~aAee~~~~I~~~l~g~d---mvfitaG~GGGTGtGaaPVvakiake--~g~ltvavvt~Pf~--~EG~~r~ 144 (338)
T COG0206 72 GANPEVGRAAAEESIEEIEEALKGAD---MVFVTAGMGGGTGTGAAPVVAEIAKE--LGALTVAVVTLPFS--FEGSPRM 144 (338)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhccCC---eEEEEeeecCCccccccHHHHHHHHh--cCCcEEEEEEecch--hcCchHH
Confidence 34477789999999999999988777 57999999999999999999999999 47788899999996 5666778
Q ss_pred hhHHHHHhhhhhccCccccccchHHHHHhhccCCCCCCCcchhhHHHHHHhhccccccccCCCCccchhhhccCCccCCC
Q psy15389 677 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPR 756 (864)
Q Consensus 677 YNs~Lsl~~L~e~sd~vi~~dN~al~~i~~~~l~~~~~~~~~~N~~Ia~~is~~t~~~rf~g~~~~dl~~l~~nLvP~P~ 756 (864)
-|+.-++..|.+++|.+|+++|+.|.+... ...+. .+|...|.++++.+.+++..+--||..|.|+.++.+-+-..-.
T Consensus 145 ~~A~~gi~~L~~~~DtlIvi~Ndkll~~~~-~~~~~-~Af~~ad~vl~~~v~~i~e~I~~~glinvDfaDv~~vm~~~G~ 222 (338)
T COG0206 145 ENAEEGIEELREVVDTLIVIPNDKLLKGKD-KTPIA-EAFNEADDVLGNAVKGITELITKPGLVNVDFADVRTVMKGGGF 222 (338)
T ss_pred HHHHHHHHHHHHhCCcEEEEecHHHHhccC-cccHH-HHHHHHHHHHHHHHHHHHHHhccCceEeecHHHHHHHHhcCCc
Confidence 899999999999999999999999998875 33322 3688999999999999999999999999999999876665221
Q ss_pred ccccccccccccccccccccccCHHHHHHHhcCCCCCccc-ccCCCCccccccccccc-cCChhhHHHHHHhhhcc
Q psy15389 757 IHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK-CDPRHGKYMACCMLYRG-DVVPKDVNAAIATIKTK 830 (864)
Q Consensus 757 l~fl~~s~~P~~~~~~~~~~~~~~~~l~~~~~~~~n~~~~-~~~~~~~~ls~~~~~RG-~~~~~~i~~~~~~~~~k 830 (864)
-+..+. ... ......+..+..++. -++. ++....+. +...+..| +++..++++++..++.+
T Consensus 223 ---A~mG~g-----~~~--~~~r~~~a~~~A~~~--pLl~~~~i~gA~~-~Lv~i~g~~dl~l~ev~~~~~~i~~~ 285 (338)
T COG0206 223 ---ALMGIG-----RAS--GEDRAREAVEKALNS--PLLDDVDIEGAKG-ALINITGGKDLTLEEVEEALERIQEI 285 (338)
T ss_pred ---eeEEEe-----ecc--chhHHHHHHHHHhcC--Ccccccccccccc-eEEEEecCCccCHHHHHHHHHHHHHH
Confidence 111111 000 011122333433322 2332 33222221 11233344 67889999998887665
No 61
>PF10644 Misat_Tub_SegII: Misato Segment II tubulin-like domain; InterPro: IPR019605 The misato protein contains three distinct, conserved domains, segments I, II and III and is involved in the regulation of mitochondrial distribution and morphology []. This entry represents misato segment II. Segments I and III are common to tubulins (IPR003008 from INTERPRO), but segment II aligns with myosin heavy chain sequences from Drosophila melanogaster (Fruit fly, P05661 from SWISSPROT), rabbit (P04460 from SWISSPROT), and human. Segment II of misato is a major contributor to its greater length compared with the various tubulins. The most significant sequence similarities to this 54-amino acid region are from a motif found in the heavy chains of myosins from different organisms. A comparison of segment II with the vertebrate myosin heavy chains reveals that it is homologous to a myosin peptide in the hinge region linking the S2 and LMM domains. Segment II also contains heptad repeats which are characteristic of the myosin tail alpha-helical coiled-coils [].
Probab=99.15 E-value=3e-11 Score=113.30 Aligned_cols=67 Identities=19% Similarity=0.273 Sum_probs=49.7
Q ss_pred CeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCcccccccCC----CCccccceeeeCCCCceee
Q psy15389 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG----AGKHVPRAVFVDLEPTVVD 75 (864)
Q Consensus 1 rEiitiq~Gq~GnqIG~~fW~~~~~e~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~----~~~~~pRailvDle~~~i~ 75 (864)
|||||||+|+.+|.||+||||++...+. .+... ...+...+++|+++. ..+|+||+|++|+..+.-.
T Consensus 1 ~EIiTlq~G~~aN~vgtHfwN~Qe~~~~--y~~~~------~~~~i~~dvlfR~g~~~~g~~TYtPRlL~~Dlkg~lGs 71 (115)
T PF10644_consen 1 REIITLQLGHYANFVGTHFWNIQESYLP--YDPDE------KPSEIDHDVLFREGITLSGTVTYTPRLLLFDLKGGLGS 71 (115)
T ss_pred CcEEEEEcccccCcHHHhhhhhhhcccc--cCccc------cCcccCCceEEecccCcCCCeeECCcEEEEecCCCcCc
Confidence 8999999999999999999995544442 22111 112346689999863 3589999999999887544
No 62
>PF10644 Misat_Tub_SegII: Misato Segment II tubulin-like domain; InterPro: IPR019605 The misato protein contains three distinct, conserved domains, segments I, II and III and is involved in the regulation of mitochondrial distribution and morphology []. This entry represents misato segment II. Segments I and III are common to tubulins (IPR003008 from INTERPRO), but segment II aligns with myosin heavy chain sequences from Drosophila melanogaster (Fruit fly, P05661 from SWISSPROT), rabbit (P04460 from SWISSPROT), and human. Segment II of misato is a major contributor to its greater length compared with the various tubulins. The most significant sequence similarities to this 54-amino acid region are from a motif found in the heavy chains of myosins from different organisms. A comparison of segment II with the vertebrate myosin heavy chains reveals that it is homologous to a myosin peptide in the hinge region linking the S2 and LMM domains. Segment II also contains heptad repeats which are characteristic of the myosin tail alpha-helical coiled-coils [].
Probab=98.94 E-value=6.3e-10 Score=104.43 Aligned_cols=64 Identities=23% Similarity=0.425 Sum_probs=46.8
Q ss_pred eeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccccccC----CCCCcccceeEeCCCCC
Q psy15389 494 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET----GAGKHVPRAVFVDLEPT 565 (864)
Q Consensus 494 rEiItiqvGqcGnqIG~~fW~~~~~eh~i~~~g~~~~~~~~~~~~~~~~~~F~e~----~~~~~~pRailiD~e~~ 565 (864)
|||||||+|+..|.||+||||.+......+++... ..-..+++|++. +..+|+||+|++|+..+
T Consensus 1 ~EIiTlq~G~~aN~vgtHfwN~Qe~~~~y~~~~~~--------~~i~~dvlfR~g~~~~g~~TYtPRlL~~Dlkg~ 68 (115)
T PF10644_consen 1 REIITLQLGHYANFVGTHFWNIQESYLPYDPDEKP--------SEIDHDVLFREGITLSGTVTYTPRLLLFDLKGG 68 (115)
T ss_pred CcEEEEEcccccCcHHHhhhhhhhcccccCccccC--------cccCCceEEecccCcCCCeeECCcEEEEecCCC
Confidence 79999999999999999999965544432222110 012358999983 44589999999998665
No 63
>smart00865 Tubulin_C Tubulin/FtsZ family, C-terminal domain. This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.
Probab=98.45 E-value=9.5e-08 Score=89.88 Aligned_cols=93 Identities=27% Similarity=0.420 Sum_probs=78.2
Q ss_pred CccchhhhccCCccCCCccccccccccccccccccccccCHHHHHH--HhcCCCCCcccccCCCCccccccccccccCCh
Q psy15389 740 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITN--ACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 817 (864)
Q Consensus 740 ~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~~~~l~~--~~~~~~n~~~~~~~~~~~~ls~~~~~RG~~~~ 817 (864)
+|.|++++.++|+|+| |++++++|+... .+..+..+++. .+|++++++..+++.. ||+++. +++.
T Consensus 1 in~D~~dl~~~L~p~~---~~~~~~~~~~~~----~~~~~a~~~~~~~~l~~~~~~~~a~~~~~--~l~~~~----~~~~ 67 (120)
T smart00865 1 INVDFADVKTVMVPMG---FAMMGIGPASGE----NRALEAAELAISSPLLEPSNIMGAKGVLV--NITGGP----DLTL 67 (120)
T ss_pred CCCchHHHHHhccCCC---eEEEEEEEecCC----ChHHHHHHHHHhCcccCCcchhhcCceEE--EEEcCC----CCCH
Confidence 4789999999999999 999999999752 34567788877 8999999988877653 888876 7899
Q ss_pred hhHHHHHHhhhccCc-cCccccCC-CCceE
Q psy15389 818 KDVNAAIATIKTKRT-IQFVDWCP-TGFKV 845 (864)
Q Consensus 818 ~~i~~~~~~~~~k~~-~~fv~W~p-~~~k~ 845 (864)
+|+.+++..++++.. ..|+.|+| .++++
T Consensus 68 ~ev~~~~~~i~~~~~~~~~v~w~~~~~~~~ 97 (120)
T smart00865 68 KEVNEAMERIREKADPDAFIIWGPVIDEEL 97 (120)
T ss_pred HHHHHHHHHHHHhcCCCceEEEccccCCcC
Confidence 999999999988866 88999999 56654
No 64
>smart00865 Tubulin_C Tubulin/FtsZ family, C-terminal domain. This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.
Probab=98.12 E-value=8.3e-07 Score=83.47 Aligned_cols=113 Identities=27% Similarity=0.418 Sum_probs=86.3
Q ss_pred CCCChhhhhhcCcCCCCcccCccccccccchhhhhhcccCHHHHHH--HhcCCCCceeecCCCCCchhhhhhhhcCCCCh
Q psy15389 249 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITN--ACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 326 (864)
Q Consensus 249 ~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~i~~--~~~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~ 326 (864)
+|.|++++.++|+|+| |++++++|.... .+..+..++.. .++++.+.+..+++.. |+++.. +.+.
T Consensus 1 in~D~~dl~~~L~p~~---~~~~~~~~~~~~----~~~~~a~~~~~~~~l~~~~~~~~a~~~~~--~l~~~~----~~~~ 67 (120)
T smart00865 1 INVDFADVKTVMVPMG---FAMMGIGPASGE----NRALEAAELAISSPLLEPSNIMGAKGVLV--NITGGP----DLTL 67 (120)
T ss_pred CCCchHHHHHhccCCC---eEEEEEEEecCC----ChHHHHHHHHHhCcccCCcchhhcCceEE--EEEcCC----CCCH
Confidence 5789999999999999 999999999762 34456667766 8888888777665543 666655 6788
Q ss_pred HHHHHHHHHhhccCc-ccccccCC-CCceEEEecCCCcccCCCCcccccceEEEeec-cHHHHHHHHHH
Q psy15389 327 KDVNAAIATIKTKRT-IQFVDWCP-TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN-TTAIAEAWARL 392 (864)
Q Consensus 327 ~~i~~~~~~~~~~~~-~~f~~W~p-~~~~v~~~~~~p~~~~~~~~~~~~~s~~~lsN-st~i~~~l~~l 392 (864)
+++.+.+..++.+.. ..|+.|.| ..+++. .+.+.++| +|+|..+|+++
T Consensus 68 ~ev~~~~~~i~~~~~~~~~v~w~~~~~~~~~------------------~~~~~i~ni~t~i~~~~~~~ 118 (120)
T smart00865 68 KEVNEAMERIREKADPDAFIIWGPVIDEELG------------------GDEIRVTVIATGIGSAFKRL 118 (120)
T ss_pred HHHHHHHHHHHHhcCCCceEEEccccCCcCC------------------CCcEEEEEEecccCcccccc
Confidence 999999888887765 77899988 333211 34678999 99999888765
No 65
>PF13809 Tubulin_2: Tubulin like
Probab=97.01 E-value=0.0083 Score=67.51 Aligned_cols=102 Identities=18% Similarity=0.125 Sum_probs=62.2
Q ss_pred eccccCcCCCccccccc---chhhHHHHHHHHHHhhh-----cc-CCccceeeEeecCCCccccchHHHHHHHHhhh---
Q psy15389 586 TGKEDAANNYARGHYTI---GKEIVDLVLDRIRKLAD-----QC-TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY--- 653 (864)
Q Consensus 586 ~~~~gagnnwa~G~~~~---G~~~~~~~~d~ir~~~E-----~c-D~lqgf~i~~Sl~GGTGSGlgs~lle~L~dey--- 653 (864)
....|||..-+.|.... -+++.+.+.+.++..++ .. +.---++|+.||+||||||+---++-.||+.+
T Consensus 100 ~~~~GAgq~R~~GRla~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~V~Vv~SlaGGTGSG~~lDia~~lr~~~~~~ 179 (345)
T PF13809_consen 100 PLSAGAGQIRALGRLAFFSNYQEIREALEAALDNFMQERLGGKGGGGGLNVFVVGSLAGGTGSGMFLDIAYLLRDILKQP 179 (345)
T ss_pred chhcCCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCcEEEEEEecCCccchhHHHHHHHHHHHHhhcc
Confidence 34568888777775332 22344444444442111 11 11113799999999999999999999999977
Q ss_pred --CCcceEEEEEecCCCCCC---cccchhhHHHHHhhhh
Q psy15389 654 --GKKSKLEFAIYPAPQVST---AVVEPYNSILTTHTTL 687 (864)
Q Consensus 654 --p~~~i~~~~v~P~~~~~~---~~v~~YNs~Lsl~~L~ 687 (864)
....+..+.++|....+. .....-|+.=+|.+|.
T Consensus 180 ~~~~~~i~~~~~lP~~f~~~~~~~~~~~aNayAAL~EL~ 218 (345)
T PF13809_consen 180 GQDNPRIYGFFVLPDAFPSIPGGGERVRANAYAALKELD 218 (345)
T ss_pred cCCCceEEEEEECCcccccCCcchhhhhhHHHHHHHHHH
Confidence 344578888889742111 1334556665555553
No 66
>PF13809 Tubulin_2: Tubulin like
Probab=96.96 E-value=0.01 Score=66.78 Aligned_cols=62 Identities=19% Similarity=0.128 Sum_probs=45.6
Q ss_pred eeEEeecCCccccChHHHHHHHHHHHh-----CCcceeEEEEecCCCCCc---ccccchhhHHHHHHhhh
Q psy15389 136 FLIFHSFGGGTGSGFTSLLMERLSVDY-----GKKSKLEFAIYPAPQVST---AVVEPYNSILTTHTTLE 197 (864)
Q Consensus 136 f~i~~sl~GGTGSGlgs~lle~L~dey-----p~~~i~~~~v~P~~~~~~---~~v~~yNt~Lsl~~L~e 197 (864)
++|+.|++||||||+---++-.||+.+ ....+..+.++|....+. ...-.-|+.=+|..|.-
T Consensus 150 V~Vv~SlaGGTGSG~~lDia~~lr~~~~~~~~~~~~i~~~~~lP~~f~~~~~~~~~~~aNayAAL~EL~~ 219 (345)
T PF13809_consen 150 VFVVGSLAGGTGSGMFLDIAYLLRDILKQPGQDNPRIYGFFVLPDAFPSIPGGGERVRANAYAALKELDY 219 (345)
T ss_pred EEEEEecCCccchhHHHHHHHHHHHHhhcccCCCceEEEEEECCcccccCCcchhhhhhHHHHHHHHHHH
Confidence 789999999999999999999999977 345689999999842111 12334477666666643
No 67
>PLN02847 triacylglycerol lipase
Probab=62.07 E-value=19 Score=43.11 Aligned_cols=115 Identities=22% Similarity=0.276 Sum_probs=67.2
Q ss_pred ccccccCCCCCcccc-eeEeCCCCCeeccccccccc--c----------cCCCcceeeccccCc----CCCcccccccch
Q psy15389 542 NTFFSETGAGKHVPR-AVFVDLEPTVVDEVRTGTYR--Q----------LFHPEQLITGKEDAA----NNYARGHYTIGK 604 (864)
Q Consensus 542 ~~~F~e~~~~~~~pR-ailiD~e~~~i~~i~~~~~~--~----------lf~~~~~~~~~~gag----nnwa~G~~~~G~ 604 (864)
++++.....+.|.|. .|++|=+.+.|=-.-.|... + .|++..+ ...|.. ..--+|++...+
T Consensus 154 DVL~~~~ks~i~kPaffVavDh~~K~IVVsIRGT~Si~D~LTDL~~~~vPf~~s~l--~~gG~~n~~~G~AH~Gml~AAr 231 (633)
T PLN02847 154 DVLIQKPKAGILKPAFTIIRDENSKCFLLLIRGTHSIKDTLTAATGAVVPFHHSVL--HDGGVSNLVLGYAHCGMVAAAR 231 (633)
T ss_pred HEEEeecccccCCCCeEEEEeCCCCEEEEEECCCCCHHHHHHhcccccccCCcccc--cccCcccCcCCccCccHHHHHH
Confidence 556666667778877 47888766654333233211 0 1111111 111111 112345555555
Q ss_pred hhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHh--hhCCcceEEEE
Q psy15389 605 EIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV--DYGKKSKLEFA 662 (864)
Q Consensus 605 ~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~d--eyp~~~i~~~~ 662 (864)
.+.+.+...|++.++++...+=+++=||||||+ ++.+.-.|++ .|++...++|+
T Consensus 232 wI~~~i~~~L~kal~~~PdYkLVITGHSLGGGV----AALLAilLRe~~~fssi~CyAFg 287 (633)
T PLN02847 232 WIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGT----AALLTYILREQKEFSSTTCVTFA 287 (633)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEeccChHHHH----HHHHHHHHhcCCCCCCceEEEec
Confidence 677788888999999998888889999998876 4444445554 46665555555
No 68
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=53.90 E-value=12 Score=35.67 Aligned_cols=29 Identities=17% Similarity=0.402 Sum_probs=24.2
Q ss_pred CccccChHHHHHHHHHHHhCC-cceeEEEE
Q psy15389 144 GGTGSGFTSLLMERLSVDYGK-KSKLEFAI 172 (864)
Q Consensus 144 GGTGSGlgs~lle~L~deyp~-~~i~~~~v 172 (864)
+|-|.|+|..++|.||+++|+ ..+++...
T Consensus 6 DGQGGGiG~~iv~~lr~~~~~~~eI~AlGT 35 (131)
T PF12953_consen 6 DGQGGGIGKQIVEKLRKELPEEVEIIALGT 35 (131)
T ss_pred eCCCChhHHHHHHHHHHhCCCCcEEEEEeh
Confidence 466779999999999999998 66777755
No 69
>PLN02847 triacylglycerol lipase
Probab=50.87 E-value=56 Score=39.27 Aligned_cols=116 Identities=22% Similarity=0.267 Sum_probs=65.1
Q ss_pred ccccccCCCCccccce-eeeCCCCceeeeeeccccc------------ccCCCCccccccccccc---ccCCcccccccc
Q psy15389 49 NTFFSETGAGKHVPRA-VFVDLEPTVVDEVRTGTYR------------QLFHPEQLITGKEDAAR---QIGEYSGHYTIG 112 (864)
Q Consensus 49 ~~~F~e~~~~~~~pRa-ilvDle~~~i~~~~~~~~~------------~~~~~~~~~~~~~gsgn---n~a~~~G~~~~G 112 (864)
|+++.....+.|.|.- |++|=+.+.|--.-.|... ..|++..+ ...|..+ .++ -+|++.-.
T Consensus 154 DVL~~~~ks~i~kPaffVavDh~~K~IVVsIRGT~Si~D~LTDL~~~~vPf~~s~l--~~gG~~n~~~G~A-H~Gml~AA 230 (633)
T PLN02847 154 DVLIQKPKAGILKPAFTIIRDENSKCFLLLIRGTHSIKDTLTAATGAVVPFHHSVL--HDGGVSNLVLGYA-HCGMVAAA 230 (633)
T ss_pred HEEEeecccccCCCCeEEEEeCCCCEEEEEECCCCCHHHHHHhcccccccCCcccc--cccCcccCcCCcc-CccHHHHH
Confidence 5566655667777665 7888776655444344321 01111111 1111101 112 13444444
Q ss_pred hhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHH--HhCCcceeEEE
Q psy15389 113 KEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSV--DYGKKSKLEFA 171 (864)
Q Consensus 113 ~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~d--eyp~~~i~~~~ 171 (864)
+.+.+.+...|++.+++|...+=+++=||||||+. +.+.-.|++ +|++...++|+
T Consensus 231 rwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVA----ALLAilLRe~~~fssi~CyAFg 287 (633)
T PLN02847 231 RWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTA----ALLTYILREQKEFSSTTCVTFA 287 (633)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHH----HHHHHHHhcCCCCCCceEEEec
Confidence 56677788888999999988877788899999764 333444454 45665555555
No 70
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=46.56 E-value=16 Score=34.89 Aligned_cols=43 Identities=21% Similarity=0.424 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHH
Q psy15389 116 VDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 161 (864)
Q Consensus 116 ~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~de 161 (864)
.+...++|+..++++|. +|.+++.++ |||=. -....+|.+.++
T Consensus 41 ~gt~~~~i~~ai~~~~~-dGVlVltDL-Gssp~-n~~~a~e~~~~~ 83 (124)
T PRK14484 41 IGTSFDQIQEAIEKNES-DGVLIFFDL-GSAEM-NAEMAIEMLDGE 83 (124)
T ss_pred ccchHHHHHHHHHhcCc-CCeEEEEeC-CChHH-HHHHHHHhcCCC
Confidence 44567889999999999 999999999 77621 123334555433
No 71
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=45.25 E-value=33 Score=33.38 Aligned_cols=59 Identities=20% Similarity=0.239 Sum_probs=41.2
Q ss_pred ccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhCCcceE
Q psy15389 597 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKL 659 (864)
Q Consensus 597 ~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~~~i~ 659 (864)
+|++.....+.+.+...+++...++..-+=+++=||+||+ ++..+...++...+.+.+.
T Consensus 1 ~Gf~~~~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~----lA~l~a~~~~~~~~~~~~~ 59 (153)
T cd00741 1 KGFYKAARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGA----LAGLAGLDLRGRGLGRLVR 59 (153)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHH----HHHHHHHHHHhccCCCceE
Confidence 3666667778888888888877777777888999999875 5555556666654333333
No 72
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=45.10 E-value=24 Score=32.87 Aligned_cols=33 Identities=18% Similarity=0.428 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHhhhccCCCCceeEEeecCCccc
Q psy15389 115 IVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 147 (864)
Q Consensus 115 ~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTG 147 (864)
-.+++.+++++.+++.+.-+|++++.++.|||-
T Consensus 39 ~~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggsp 71 (116)
T PF03610_consen 39 SIEDFEEKLEEAIEELDEGDGVLILTDLGGGSP 71 (116)
T ss_dssp CHHHHHHHHHHHHHHCCTTSEEEEEESSTTSHH
T ss_pred CHHHHHHHHHHHHHhccCCCcEEEEeeCCCCcc
Confidence 456777888888888888999999999999873
No 73
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=43.10 E-value=23 Score=33.87 Aligned_cols=53 Identities=17% Similarity=0.277 Sum_probs=35.9
Q ss_pred CCccccchHHHHHHHHhhhCC-cceEEEEEecCCCCCCcccchhhHHHHHhhhhhccCccccccchHH
Q psy15389 635 GGTGSGFTSLLMERLSVDYGK-KSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 701 (864)
Q Consensus 635 GGTGSGlgs~lle~L~deyp~-~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~L~e~sd~vi~~dN~al 701 (864)
.|-|.|+|..+++.||+++|+ ..+++... |++=+-.-|..-+|.---=+|.-.
T Consensus 6 DGQGGGiG~~iv~~lr~~~~~~~eI~AlGT--------------Na~AT~~MlKaGA~~gATGENaIv 59 (131)
T PF12953_consen 6 DGQGGGIGKQIVEKLRKELPEEVEIIALGT--------------NAIATSAMLKAGANEGATGENAIV 59 (131)
T ss_pred eCCCChhHHHHHHHHHHhCCCCcEEEEEeh--------------hHHHHHHHHHcCCCCcccccchhe
Confidence 356779999999999999998 56665554 555555555555555444444443
No 74
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=42.06 E-value=20 Score=34.28 Aligned_cols=43 Identities=21% Similarity=0.424 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhh
Q psy15389 607 VDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 652 (864)
Q Consensus 607 ~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~de 652 (864)
.+...++|++.+++++. +|.+++.+| |||=. =....+|.+.++
T Consensus 41 ~gt~~~~i~~ai~~~~~-dGVlVltDL-Gssp~-n~~~a~e~~~~~ 83 (124)
T PRK14484 41 IGTSFDQIQEAIEKNES-DGVLIFFDL-GSAEM-NAEMAIEMLDGE 83 (124)
T ss_pred ccchHHHHHHHHHhcCc-CCeEEEEeC-CChHH-HHHHHHHhcCCC
Confidence 34567888999999999 999999999 77621 133344555434
No 75
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=40.79 E-value=30 Score=32.27 Aligned_cols=33 Identities=18% Similarity=0.428 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHhhhccCCccceeeEeecCCCcc
Q psy15389 606 IVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 638 (864)
Q Consensus 606 ~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTG 638 (864)
-.+++.+++++.+++.+.-+|++++.+++|||-
T Consensus 39 ~~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggsp 71 (116)
T PF03610_consen 39 SIEDFEEKLEEAIEELDEGDGVLILTDLGGGSP 71 (116)
T ss_dssp CHHHHHHHHHHHHHHCCTTSEEEEEESSTTSHH
T ss_pred CHHHHHHHHHHHHHhccCCCcEEEEeeCCCCcc
Confidence 356677888888888888899999999999873
No 76
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=37.93 E-value=37 Score=35.45 Aligned_cols=74 Identities=22% Similarity=0.320 Sum_probs=50.3
Q ss_pred CCCcccccccchhhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhCCcceEEEEEecCCCCCC
Q psy15389 593 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVST 671 (864)
Q Consensus 593 nnwa~G~~~~G~~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~~~ 671 (864)
....+|++..-..+.+.+...+++..+++...+=++.=|||||+ +++.+.-.|...++... +....|-.+..++
T Consensus 97 ~~vh~Gf~~~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGa----iA~l~a~~l~~~~~~~~-i~~~tFg~P~vg~ 170 (229)
T cd00519 97 GKVHSGFYSAYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGA----LASLLALDLRLRGPGSD-VTVYTFGQPRVGN 170 (229)
T ss_pred cEEcHHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHH----HHHHHHHHHHhhCCCCc-eEEEEeCCCCCCC
Confidence 34456777777778888888888888888777778999999874 56666666766653333 3344444444344
No 77
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=35.04 E-value=71 Score=30.07 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhhccCCCCceeEEeecCCcc
Q psy15389 116 VDLVLDRIRKLADQCTGLQGFLIFHSFGGGT 146 (864)
Q Consensus 116 ~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGT 146 (864)
.+++.+++++.+++.+.-+|++++.++-|||
T Consensus 40 ~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 40 PDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 4567778888888888788999999999987
No 78
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=33.15 E-value=33 Score=32.48 Aligned_cols=56 Identities=21% Similarity=0.356 Sum_probs=39.4
Q ss_pred cccccccch-hhHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhCC
Q psy15389 596 ARGHYTIGK-EIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGK 655 (864)
Q Consensus 596 a~G~~~~G~-~~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~ 655 (864)
..|++..-. ...+++.+.|++.+++.....=.+.=||||| +++..+.-.+.+..+.
T Consensus 35 h~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~itGHSLGG----alA~l~a~~l~~~~~~ 91 (140)
T PF01764_consen 35 HSGFLDAAEDSLYDQILDALKELVEKYPDYSIVITGHSLGG----ALASLAAADLASHGPS 91 (140)
T ss_dssp EHHHHHHHHCHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHHCTTT
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhcccCccchhhccchHH----HHHHHHHHhhhhcccc
Confidence 345555545 6777888888888887766556677899976 4667777777766654
No 79
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=32.18 E-value=59 Score=30.50 Aligned_cols=32 Identities=9% Similarity=0.153 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhhhccCCCCceeEEeecCCccc
Q psy15389 116 VDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 147 (864)
Q Consensus 116 ~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTG 147 (864)
.+++.+++++.+++.+.=+|++++.++-|||=
T Consensus 41 ~~~~~~~l~~~i~~~~~~~~vivltDl~GGSp 72 (116)
T TIGR00824 41 AETLQEKYNAALADLDTEEEVLFLVDIFGGSP 72 (116)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCH
Confidence 56678888888888877789999999999973
No 80
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=30.72 E-value=1e+02 Score=31.44 Aligned_cols=85 Identities=15% Similarity=0.177 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHhhhccCCccceeeEeecCCCccccchHHHHHHHHhhhCCcceEEEEEecCCCCCCcccchhhHHHHHhh
Q psy15389 606 IVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHT 685 (864)
Q Consensus 606 ~~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~YNs~Lsl~~ 685 (864)
+...+.+.|++.+|+ .+.=| +.+.+-|+. -+++-++-.|+.+||.. -...|+|+...+..- +-..-.-+..
T Consensus 27 ik~~L~~~i~~lie~--G~~~f--i~GgalG~D-~waae~vl~LK~~yp~i--kL~~v~Pf~~q~~~W--~~~~q~~y~~ 97 (177)
T PF06908_consen 27 IKKALKKQIIELIEE--GVRWF--ITGGALGVD-LWAAEVVLELKKEYPEI--KLALVLPFENQGNNW--NEANQERYQS 97 (177)
T ss_dssp HHHHHHHHHHHHHTT--T--EE--EE---TTHH-HHHHHHHHTTTTT-TT---EEEEEESSB-TTTTS---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCCEE--EECCcccHH-HHHHHHHHHHHhhhhhe--EEEEEEcccchhhcC--CHHHHHHHHH
Confidence 456667777888875 33322 222222222 34667777889999964 447888986433211 1123345566
Q ss_pred hhhccCccccccch
Q psy15389 686 TLEHSDCAFMVDNE 699 (864)
Q Consensus 686 L~e~sd~vi~~dN~ 699 (864)
|.+.||.++++..+
T Consensus 98 il~~aD~v~~vs~~ 111 (177)
T PF06908_consen 98 ILEQADFVVVVSER 111 (177)
T ss_dssp HHHH-SEEEESSSS
T ss_pred HHHhCCEEEEccCC
Confidence 67777777776543
No 81
>PF01713 Smr: Smr domain; InterPro: IPR002625 This family includes the Smr (Small MutS Related) proteins, and the C-terminal region of the MutS2 protein. It has been suggested that this domain interacts with the MutS1 (P23909 from SWISSPROT) protein in the case of Smr proteins and with the N-terminal MutS related region of MutS2, P94545 from SWISSPROT [].; PDB: 3QD7_X 2D9I_A 3FAU_A 2VKC_A 2ZQE_A.
Probab=28.94 E-value=1.8e+02 Score=25.18 Aligned_cols=55 Identities=18% Similarity=0.334 Sum_probs=35.7
Q ss_pred HHHHHHHHHhhhcc--CCccceeeEeecC----CCccccchHHHHHHHHhhhCCcceEEEEEec
Q psy15389 608 DLVLDRIRKLADQC--TGLQGFLIFHSFG----GGTGSGFTSLLMERLSVDYGKKSKLEFAIYP 665 (864)
Q Consensus 608 ~~~~d~ir~~~E~c--D~lqgf~i~~Sl~----GGTGSGlgs~lle~L~deyp~~~i~~~~v~P 665 (864)
++..+.++..++.| ...+.+.|+|+.| +|. +-..+.+.|++.+....+..+.--+
T Consensus 9 ~eA~~~l~~~l~~~~~~~~~~~~II~G~G~hS~~g~---Lk~~V~~~L~~~~~~~~v~~~~~~~ 69 (83)
T PF01713_consen 9 EEALRALEEFLDEARQRGIRELRIITGKGNHSKGGV---LKRAVRRWLEEGYQYEEVLAYRDAE 69 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTHSEEEEE--STCTCCTSH---HHHHHHHHHHHTHCCTTEEEEEE--
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEeccCCCCCCCc---HHHHHHHHHHhhhccchhheeeecC
Confidence 34555666666665 4668899999998 665 8888889997766666666554433
No 82
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=28.75 E-value=84 Score=30.48 Aligned_cols=51 Identities=24% Similarity=0.320 Sum_probs=35.8
Q ss_pred cccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHH
Q psy15389 107 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 161 (864)
Q Consensus 107 G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~de 161 (864)
|++.....+...+...+++...++..-+=+++=||+||+. +..+...++..
T Consensus 2 Gf~~~~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~l----A~l~a~~~~~~ 52 (153)
T cd00741 2 GFYKAARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGAL----AGLAGLDLRGR 52 (153)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHH----HHHHHHHHHhc
Confidence 5566667777788888888777777777778888998865 34444555554
No 83
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=28.71 E-value=1.2e+02 Score=30.97 Aligned_cols=84 Identities=15% Similarity=0.186 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHHhCCcceeEEEEecCCCCCcccccchhhHHHHHH
Q psy15389 115 IVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHT 194 (864)
Q Consensus 115 ~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~ 194 (864)
+...+.+.|++.+|+ .+. -++.+.+-|+- -.++-++-.|+.+||.. -...++|+...+..--+ ..-.-+..
T Consensus 27 ik~~L~~~i~~lie~--G~~--~fi~GgalG~D-~waae~vl~LK~~yp~i--kL~~v~Pf~~q~~~W~~--~~q~~y~~ 97 (177)
T PF06908_consen 27 IKKALKKQIIELIEE--GVR--WFITGGALGVD-LWAAEVVLELKKEYPEI--KLALVLPFENQGNNWNE--ANQERYQS 97 (177)
T ss_dssp HHHHHHHHHHHHHTT--T----EEEE---TTHH-HHHHHHHHTTTTT-TT---EEEEEESSB-TTTTS-H--HHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCC--EEEECCcccHH-HHHHHHHHHHHhhhhhe--EEEEEEcccchhhcCCH--HHHHHHHH
Confidence 455667778888874 232 22323333332 24667777789999864 44778898643332111 22234555
Q ss_pred hhhcCCEEEEEec
Q psy15389 195 TLEHSDCAFMVDN 207 (864)
Q Consensus 195 L~e~sd~vi~~dN 207 (864)
|.+.||-++.+..
T Consensus 98 il~~aD~v~~vs~ 110 (177)
T PF06908_consen 98 ILEQADFVVVVSE 110 (177)
T ss_dssp HHHH-SEEEESSS
T ss_pred HHHhCCEEEEccC
Confidence 5666666666544
No 84
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=27.93 E-value=70 Score=30.09 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhhhccCCccceeeEeecCCCc
Q psy15389 607 VDLVLDRIRKLADQCTGLQGFLIFHSFGGGT 637 (864)
Q Consensus 607 ~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGT 637 (864)
.+++.+++++.+++.+.-+|++++.++-|||
T Consensus 40 ~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 40 PDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 4566777777777777778999999999887
No 85
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=27.62 E-value=64 Score=33.66 Aligned_cols=67 Identities=24% Similarity=0.331 Sum_probs=44.5
Q ss_pred ccccccchhhHHHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHHHHHHhCCcceeEEEEecCCC
Q psy15389 106 SGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQ 177 (864)
Q Consensus 106 ~G~~~~G~~~~e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~ 177 (864)
+|++..-..+.+.+...++...+++...+=++.=|||||+. ++.++-.|...++... +...+|-.+.
T Consensus 101 ~Gf~~~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGai----A~l~a~~l~~~~~~~~-i~~~tFg~P~ 167 (229)
T cd00519 101 SGFYSAYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGAL----ASLLALDLRLRGPGSD-VTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHH----HHHHHHHHHhhCCCCc-eEEEEeCCCC
Confidence 67666666777888888888888887777778888998864 4555555666543322 3344444443
No 86
>PF01713 Smr: Smr domain; InterPro: IPR002625 This family includes the Smr (Small MutS Related) proteins, and the C-terminal region of the MutS2 protein. It has been suggested that this domain interacts with the MutS1 (P23909 from SWISSPROT) protein in the case of Smr proteins and with the N-terminal MutS related region of MutS2, P94545 from SWISSPROT [].; PDB: 3QD7_X 2D9I_A 3FAU_A 2VKC_A 2ZQE_A.
Probab=26.99 E-value=1.9e+02 Score=24.97 Aligned_cols=56 Identities=18% Similarity=0.330 Sum_probs=36.2
Q ss_pred HHHHHHHHHhhhcc--CCCCceeEEeecC----CccccChHHHHHHHHHHHhCCcceeEEEEecC
Q psy15389 117 DLVLDRIRKLADQC--TGLQGFLIFHSFG----GGTGSGFTSLLMERLSVDYGKKSKLEFAIYPA 175 (864)
Q Consensus 117 e~~~d~iR~~vE~c--D~lqgf~i~~sl~----GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~ 175 (864)
++..+.++..+++| ...+.+.|+|+-| +|. +-..+.+.|++.|....+..+.--+.
T Consensus 9 ~eA~~~l~~~l~~~~~~~~~~~~II~G~G~hS~~g~---Lk~~V~~~L~~~~~~~~v~~~~~~~~ 70 (83)
T PF01713_consen 9 EEALRALEEFLDEARQRGIRELRIITGKGNHSKGGV---LKRAVRRWLEEGYQYEEVLAYRDAEP 70 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTHSEEEEE--STCTCCTSH---HHHHHHHHHHHTHCCTTEEEEEE--C
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEeccCCCCCCCc---HHHHHHHHHHhhhccchhheeeecCC
Confidence 45556666666665 4668899999999 664 88888888877666666666644443
No 87
>PF08259 Periviscerokin: Periviscerokinin family; InterPro: IPR013231 Perviscerokinin neuropeptides are found in the abdominal perisympathetic organs of insects. They mediate visceral muscle contractile activity (myotropic activity). CAPA, which are in the periviscerokinin and pyrokinin peptide families, has potential medical importance. This is due to its myotropic effects on, for example, heart muscles and due to its occurrence in the Ixodoidea (ticks), which are important vectors in the transmission of many animal diseases []. These peptides also have a strong diuretic or anti-diuretic effect, suggesting they have significant medical implications [].
Probab=25.98 E-value=32 Score=18.61 Aligned_cols=9 Identities=44% Similarity=1.372 Sum_probs=6.7
Q ss_pred cCCccCCCc
Q psy15389 749 TNLVPYPRI 757 (864)
Q Consensus 749 ~nLvP~P~l 757 (864)
+-|+||||.
T Consensus 3 sGlI~fpR~ 11 (11)
T PF08259_consen 3 SGLIPFPRV 11 (11)
T ss_pred ccccccCCC
Confidence 458899983
No 88
>PF12210 Hrs_helical: Hepatocyte growth factor-regulated tyrosine kinase substrate; InterPro: IPR024641 This domain comprises the helical region of hepatocyte growth factor-regulated tyrosine kinase substrate (HRS). It is approximately 100 amino acids in length. Hrs, together with signal transducing adaptor molecule (STAM), forms the ESCRT-0 complex, which sorts ubiquitinated cell surface receptors to lysosomes for degradation []. ; PDB: 3F1I_H.
Probab=25.04 E-value=65 Score=29.19 Aligned_cols=53 Identities=26% Similarity=0.432 Sum_probs=38.5
Q ss_pred EeeccHHHHHHHHHH-------HHHHHHHHhcccceeccccCCCCc--ccHHHHHHHHHHHHHHHHH
Q psy15389 378 MLSNTTAIAEAWARL-------DHKFDLMYAKRAFVHWYVGEGMEE--GEFSEAREDLAALEKDYEE 435 (864)
Q Consensus 378 ~lsNst~i~~~l~~l-------~~~f~~m~~rrAflH~Y~~eGmee--~eF~Ea~~~l~~li~~Y~~ 435 (864)
.++|.++|..+|..+ ++...++-.+|+|+ ||+.+ ....||+..|..|.+++++
T Consensus 27 sIanDsaVqsLF~~lt~mH~~LL~~i~~~ee~R~~~-----E~lQdkL~qi~eAR~AlDalR~eH~~ 88 (96)
T PF12210_consen 27 SIANDSAVQSLFQTLTAMHPQLLKYIQEQEEKRVYY-----EGLQDKLAQIKEARAALDALREEHRE 88 (96)
T ss_dssp -GGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378889988888765 45555666677655 55543 6789999999999999974
No 89
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=24.62 E-value=93 Score=29.17 Aligned_cols=32 Identities=9% Similarity=0.153 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhhccCCccceeeEeecCCCcc
Q psy15389 607 VDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 638 (864)
Q Consensus 607 ~~~~~d~ir~~~E~cD~lqgf~i~~Sl~GGTG 638 (864)
.+++.+++++.+++.+.=+|++++.++-|||=
T Consensus 41 ~~~~~~~l~~~i~~~~~~~~vivltDl~GGSp 72 (116)
T TIGR00824 41 AETLQEKYNAALADLDTEEEVLFLVDIFGGSP 72 (116)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCH
Confidence 56677888888888777789999999999984
No 90
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=22.17 E-value=52 Score=35.51 Aligned_cols=33 Identities=27% Similarity=0.557 Sum_probs=25.3
Q ss_pred HHHHHHHHHhhhccCCCCceeEEeecCCccccChHHHHHHH
Q psy15389 117 DLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMER 157 (864)
Q Consensus 117 e~~~d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlgs~lle~ 157 (864)
+++++++|+.+++=..+ +|+|.|+|+.++.+|.
T Consensus 1 ~eil~~l~~~i~~~~pI--------ig~gaGtGlsAk~ae~ 33 (268)
T PF09370_consen 1 KEILDRLRAQIKAGKPI--------IGAGAGTGLSAKCAEK 33 (268)
T ss_dssp -HHHHHHHHHHHTT--E--------EEEEESSHHHHHHHHH
T ss_pred ChHHHHHHHHHhCCCce--------EEEeeccchhhHHHHh
Confidence 36889999999976665 6788899999988876
No 91
>TIGR02364 dha_pts dihydroxyacetone kinase, phosphotransfer subunit. In E. coli and many other bacteria, unlike the yeasts and a few bacteria such as Citrobacter freundii, the dihydroxyacetone kinase (also called glycerone kinase) transfers a phosphate from a phosphoprotein rather than from ATP and contains multiple subunits. This protein, which resembles proteins of PTS transport systems, is found with its gene adjacent to
Probab=22.14 E-value=69 Score=30.63 Aligned_cols=54 Identities=20% Similarity=0.358 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhhhccCC-CCceeEEeecCCccccChHH-HHHHHHHHHhCCcceeEEEEec
Q psy15389 116 VDLVLDRIRKLADQCTG-LQGFLIFHSFGGGTGSGFTS-LLMERLSVDYGKKSKLEFAIYP 174 (864)
Q Consensus 116 ~e~~~d~iR~~vE~cD~-lqgf~i~~sl~GGTGSGlgs-~lle~L~deyp~~~i~~~~v~P 174 (864)
.....++|++.+|+++. =+|++++.++ ||+ =+-+ ..++.+++ ++..+++..=.|
T Consensus 41 ~gt~~~~I~~ai~~~~~~~dgVlvl~DL-Ggs--~~n~e~a~~~l~~--~~~~~v~g~nlP 96 (125)
T TIGR02364 41 LGTSPDKIIEAIEKADNEADGVLIFYDL-GSA--VMNAEMAVELLED--EDRDKVHLVDAP 96 (125)
T ss_pred ccchHHHHHHHHHHhcCCCCCEEEEEcC-CCc--HhHHHHHHHHhcc--ccccEEEEechh
Confidence 34566788888899866 8999999999 764 2222 34455543 333344444344
No 92
>COG0572 Udk Uridine kinase [Nucleotide transport and metabolism]
Probab=22.00 E-value=97 Score=32.60 Aligned_cols=69 Identities=19% Similarity=0.238 Sum_probs=41.4
Q ss_pred eEeecCCCccccchHHHHHHHHhhhCCcceEEEEEecCCC-CCCcccchhhHHHHHh-hhhhccCccccccchHHHHHhh
Q psy15389 629 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQ-VSTAVVEPYNSILTTH-TTLEHSDCAFMVDNEAIYDICR 706 (864)
Q Consensus 629 i~~Sl~GGTGSGlgs~lle~L~deyp~~~i~~~~v~P~~~-~~~~~v~~YNs~Lsl~-~L~e~sd~vi~~dN~al~~i~~ 706 (864)
++-+++||+|||= +-+++.|.+.++.. ..++.+-.. .. .+.-+... +..-..|+.-.+|++.+.+-..
T Consensus 9 iiIgIaG~SgSGK-TTva~~l~~~~~~~---~~~~I~~D~YYk------~~~~~~~~~~~~~n~d~p~A~D~dLl~~~L~ 78 (218)
T COG0572 9 IIIGIAGGSGSGK-TTVAKELSEQLGVE---KVVVISLDDYYK------DQSHLPFEERNKINYDHPEAFDLDLLIEHLK 78 (218)
T ss_pred EEEEEeCCCCCCH-HHHHHHHHHHhCcC---cceEeecccccc------chhhcCHhhcCCcCccChhhhcHHHHHHHHH
Confidence 5678999999998 56888999999755 223333110 00 01111111 2233567888888888876554
Q ss_pred c
Q psy15389 707 R 707 (864)
Q Consensus 707 ~ 707 (864)
.
T Consensus 79 ~ 79 (218)
T COG0572 79 D 79 (218)
T ss_pred H
Confidence 3
No 93
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=21.84 E-value=2.3e+02 Score=30.50 Aligned_cols=75 Identities=25% Similarity=0.344 Sum_probs=44.8
Q ss_pred HHHHHhhhccCCCCceeEEeecCCccccC--hHHHHHHHH---HHHhCCcceeEEEEecCCCCCcccccchhhHHHHHHh
Q psy15389 121 DRIRKLADQCTGLQGFLIFHSFGGGTGSG--FTSLLMERL---SVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 195 (864)
Q Consensus 121 d~iR~~vE~cD~lqgf~i~~sl~GGTGSG--lgs~lle~L---~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L 195 (864)
++|+..++. ..||..+.|..|-||.. +...+.+.+ |+..+......+.| ++.-....+
T Consensus 154 eri~~i~~~---~~gfiy~vs~~G~TG~~~~~~~~~~~~i~~lr~~~~~pi~vgfGI--------------~~~e~~~~~ 216 (256)
T TIGR00262 154 ERLKQIAEK---SQGFVYLVSRAGVTGARNRAASALNELVKRLKAYSAKPVLVGFGI--------------SKPEQVKQA 216 (256)
T ss_pred HHHHHHHHh---CCCCEEEEECCCCCCCcccCChhHHHHHHHHHhhcCCCEEEeCCC--------------CCHHHHHHH
Confidence 566666665 47888998988888863 444444444 44322211222222 444567778
Q ss_pred hhc-CCEEEEEechhHHHhh
Q psy15389 196 LEH-SDCAFMVDNEAIYDIC 214 (864)
Q Consensus 196 ~e~-sd~vi~~dN~al~~~~ 214 (864)
.++ +|++++= .++.+..
T Consensus 217 ~~~GADgvVvG--Saiv~~~ 234 (256)
T TIGR00262 217 IDAGADGVIVG--SAIVKII 234 (256)
T ss_pred HHcCCCEEEEC--HHHHHHH
Confidence 888 9988773 5666554
No 94
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=21.74 E-value=2.3e+02 Score=30.80 Aligned_cols=77 Identities=23% Similarity=0.319 Sum_probs=53.4
Q ss_pred HHHHHhhhccCCCCceeEEeecCCccccChH-----HHHHHHHHHHhCCcc-eeEEEEecCCCCCcccccchhhHHHHHH
Q psy15389 121 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFT-----SLLMERLSVDYGKKS-KLEFAIYPAPQVSTAVVEPYNSILTTHT 194 (864)
Q Consensus 121 d~iR~~vE~cD~lqgf~i~~sl~GGTGSGlg-----s~lle~L~deyp~~~-i~~~~v~P~~~~~~~~v~~yNt~Lsl~~ 194 (864)
+++++.+|.+ +||.-+.|..|=||.=.. ..+++++|.-- +++ ...|+|-- .-...+
T Consensus 161 ~rl~~i~~~a---~GFiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGFGIs~--------------~e~~~~ 222 (265)
T COG0159 161 ERLKKIAEAA---SGFIYYVSRMGVTGARNPVSADVKELVKRVRKYT-DVPVLVGFGISS--------------PEQAAQ 222 (265)
T ss_pred HHHHHHHHhC---CCcEEEEecccccCCCcccchhHHHHHHHHHHhc-CCCeEEecCcCC--------------HHHHHH
Confidence 5677777765 899999999999996444 55667777644 444 46666621 224667
Q ss_pred hhhcCCEEEEEechhHHHhhhhc
Q psy15389 195 TLEHSDCAFMVDNEAIYDICRRN 217 (864)
Q Consensus 195 L~e~sd~vi~~dN~al~~~~~~~ 217 (864)
+.+.+|+||+ -.++.++..+.
T Consensus 223 v~~~ADGVIV--GSAiV~~i~~~ 243 (265)
T COG0159 223 VAEAADGVIV--GSAIVKIIEEG 243 (265)
T ss_pred HHHhCCeEEE--cHHHHHHHHhc
Confidence 7888999998 56777766553
No 95
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=21.33 E-value=2.3e+02 Score=30.68 Aligned_cols=76 Identities=22% Similarity=0.218 Sum_probs=47.1
Q ss_pred HHHHHHhhhccCCCCceeEEeecCCccccC--h---HHHHHHHHHHHhCCcceeEEEEecCCCCCcccccchhhHHHHHH
Q psy15389 120 LDRIRKLADQCTGLQGFLIFHSFGGGTGSG--F---TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHT 194 (864)
Q Consensus 120 ~d~iR~~vE~cD~lqgf~i~~sl~GGTGSG--l---gs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~ 194 (864)
.++|++.++.+ +||.-+.|.-|=||.- + -..+++++|........+.|.| |+.-....
T Consensus 157 ~eri~~i~~~a---~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~vGFGI--------------~~~e~~~~ 219 (263)
T CHL00200 157 KSRIQKIARAA---PGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIILGFGI--------------STSEQIKQ 219 (263)
T ss_pred HHHHHHHHHhC---CCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEEECCc--------------CCHHHHHH
Confidence 36777777766 7889999999988863 2 2234445555322222344444 44446677
Q ss_pred hhhc-CCEEEEEechhHHHhh
Q psy15389 195 TLEH-SDCAFMVDNEAIYDIC 214 (864)
Q Consensus 195 L~e~-sd~vi~~dN~al~~~~ 214 (864)
+.++ +|++|+ =+++.+..
T Consensus 220 ~~~~GADGvVV--GSalv~~i 238 (263)
T CHL00200 220 IKGWNINGIVI--GSACVQIL 238 (263)
T ss_pred HHhcCCCEEEE--CHHHHHHH
Confidence 8889 999887 45555444
Done!