Query psy15390
Match_columns 142
No_of_seqs 125 out of 1173
Neff 11.1
Searched_HMMs 29240
Date Fri Aug 16 19:47:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15390.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15390hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yd6_A PTPRD protein; hydrolas 99.9 2E-22 6.9E-27 127.9 13.2 133 5-141 3-202 (212)
2 2iep_A Muscle-specific kinase 99.9 1.7E-22 5.9E-27 126.0 12.4 133 5-141 4-188 (192)
3 2v5t_A NCAM2, N-CAM 2, neural 99.9 8.1E-22 2.8E-26 122.6 15.2 129 8-141 2-186 (189)
4 2a38_A Titin; Z1Z2, structural 99.9 4.5E-22 1.5E-26 124.3 14.1 131 7-142 4-194 (194)
5 2va4_A NCAM2, N-CAM 2, neural 99.9 4.6E-22 1.6E-26 123.9 13.8 131 8-142 2-192 (192)
6 2j8h_A Titin, connectin; cardi 99.9 1.9E-21 6.3E-26 121.8 16.3 131 7-142 3-196 (197)
7 2yd1_A Tyrosine-protein phosph 99.9 8.6E-22 2.9E-26 124.9 14.8 133 6-142 4-199 (212)
8 2c5d_C AXL oncogene, tyrosine- 99.9 1.1E-21 3.8E-26 122.8 14.5 128 8-141 2-191 (195)
9 1rhf_A Tyrosine-protein kinase 99.9 5.8E-22 2E-26 122.8 13.0 129 8-142 2-182 (182)
10 3lcy_A Titin; A-BAND, IG tande 99.9 1.3E-21 4.5E-26 122.2 12.9 133 4-141 3-194 (197)
11 1fnl_A Low affinity immunoglob 99.9 2.5E-21 8.5E-26 119.6 11.7 124 6-142 5-173 (175)
12 2rik_A Titin; I-SET IG fold, p 99.9 3.3E-20 1.1E-24 122.0 17.6 131 6-141 3-189 (284)
13 1qz1_A Neural cell adhesion mo 99.9 3.9E-21 1.3E-25 126.8 13.2 132 5-141 97-288 (291)
14 3p2t_A Leukocyte immunoglobuli 99.9 6.9E-22 2.4E-26 124.1 9.0 130 7-142 4-195 (196)
15 2wv3_A Neuroplastin; igcam, me 99.9 2.2E-20 7.5E-25 116.5 15.4 126 7-142 2-189 (190)
16 3sgj_C Human FCG3A receptor; r 99.9 4.8E-21 1.6E-25 121.2 11.9 122 7-141 6-172 (204)
17 3s97_C Contactin-1; carbonic a 99.9 7.2E-21 2.5E-25 119.2 12.6 124 17-142 14-200 (201)
18 2vr9_A Roundabout 1, ROBO; imm 99.9 1.6E-20 5.5E-25 119.2 13.9 132 6-141 7-205 (217)
19 2rik_A Titin; I-SET IG fold, p 99.9 8.7E-20 3E-24 120.0 17.7 135 4-142 94-283 (284)
20 3b43_A Titin; I-SET IG fold, e 99.9 1.9E-20 6.6E-25 134.1 15.7 133 4-141 380-568 (570)
21 1f97_A Junction adhesion molec 99.9 1.6E-20 5.4E-25 118.5 13.1 124 17-142 7-206 (212)
22 3kld_A Contactin 4, axcam, BIG 99.9 1.2E-20 4.1E-25 129.3 13.4 122 17-142 211-382 (384)
23 3rbs_A Myomesin-1; immunoglobu 99.9 7.5E-21 2.6E-25 120.6 11.5 129 8-142 3-206 (207)
24 1epf_A NCAM, protein (neural c 99.9 3.1E-20 1.1E-24 115.7 14.1 130 8-140 2-190 (191)
25 2v44_A NCAM2, neural cell adhe 99.9 1.2E-19 4E-24 112.9 16.6 124 17-141 8-187 (189)
26 3b43_A Titin; I-SET IG fold, e 99.9 5.1E-20 1.7E-24 131.9 16.7 132 5-141 2-191 (570)
27 2d3v_A Leukocyte immunoglobuli 99.9 5.9E-21 2E-25 119.8 10.5 130 6-141 3-195 (196)
28 3ojm_B Fibroblast growth facto 99.9 1.2E-20 4.1E-25 120.5 12.0 133 7-141 14-219 (231)
29 3k0w_A Mucosa-associated lymph 99.9 2.3E-20 8E-25 118.9 12.8 124 7-142 17-201 (218)
30 2yd9_A Receptor-type tyrosine- 99.9 4.5E-20 1.6E-24 122.6 14.5 125 5-133 3-191 (304)
31 2nzi_A Titin; IG-domain, FNIII 99.8 2.8E-19 9.4E-24 118.7 18.1 130 7-141 3-195 (305)
32 1f2q_A High affinity immunoglo 99.8 2E-21 6.8E-26 120.1 7.3 123 6-141 2-169 (176)
33 3ry4_A Low affinity immunoglob 99.8 1.9E-20 6.6E-25 114.8 11.6 122 8-142 4-170 (170)
34 3grw_A Fibroblast growth facto 99.8 3.9E-20 1.3E-24 119.1 13.4 134 7-142 10-217 (241)
35 2wim_A N-CAM 2, NCAM2, neural 99.8 6E-20 2.1E-24 121.1 14.4 130 7-141 97-282 (291)
36 2gi7_A GPVI protein; IG-like d 99.8 2.6E-20 8.7E-25 116.0 11.9 123 5-142 5-184 (184)
37 1ugn_A LIR1, leukocyte immunog 99.8 2.8E-20 9.5E-25 116.9 11.4 131 6-142 3-197 (198)
38 1uct_A Immunoglobulin alpha FC 99.8 1.8E-20 6E-25 119.8 10.4 132 5-142 6-197 (218)
39 1oll_A NK receptor; immune sys 99.8 6.1E-20 2.1E-24 114.6 11.2 130 7-142 3-187 (188)
40 2v9r_A Roundabout homolog 1; p 99.8 1.1E-19 3.7E-24 114.8 12.4 132 6-141 7-200 (212)
41 3p3y_A Neurofascin; IG domains 99.8 1.6E-19 5.4E-24 123.8 13.3 131 8-142 219-402 (404)
42 3r4d_A CEA-related cell adhesi 99.8 3.3E-19 1.1E-23 112.4 13.3 124 18-142 6-199 (208)
43 3laf_A Deleted in colorectal c 99.8 3E-19 1E-23 122.5 14.1 123 17-142 227-400 (403)
44 2jll_A NCAM2, neural cell adhe 99.8 7.7E-19 2.6E-23 120.1 15.4 128 8-141 1-192 (389)
45 1nbq_A JAM, junctional adhesio 99.8 4.5E-20 1.5E-24 116.2 8.5 123 17-141 10-207 (209)
46 3knb_A Titin; IG-like, titin, 99.8 1.4E-19 4.6E-24 102.4 9.1 95 7-142 4-98 (100)
47 2fbo_J V1V2;, variable region- 99.8 8.1E-19 2.8E-23 113.4 13.9 124 17-141 8-250 (250)
48 1bih_A Hemolin; insect immunit 99.8 5.7E-19 2E-23 120.8 13.1 122 18-141 219-394 (395)
49 2yd9_A Receptor-type tyrosine- 99.8 1E-18 3.6E-23 116.1 13.9 129 9-142 109-290 (304)
50 4fa8_A Secreted protein BARF1; 99.8 1.6E-19 5.4E-24 114.2 9.2 111 20-131 2-191 (203)
51 1qz1_A Neural cell adhesion mo 99.8 1.9E-18 6.4E-23 113.9 14.7 131 8-141 2-191 (291)
52 3bp6_B Programmed cell death 1 99.8 4.1E-19 1.4E-23 111.7 10.9 124 17-141 8-191 (202)
53 2ny1_B T-cell surface glycopro 99.8 3.3E-19 1.1E-23 110.7 10.3 121 19-141 3-177 (184)
54 1cs6_A Axonin-1; neural cell a 99.8 8E-19 2.7E-23 119.8 12.6 126 8-142 206-381 (382)
55 2o26_X MAST/stem cell growth f 99.8 1.2E-18 4.2E-23 115.0 12.9 131 5-142 88-287 (290)
56 3laf_A Deleted in colorectal c 99.8 1.9E-18 6.4E-23 118.6 14.3 130 7-141 120-309 (403)
57 1bih_A Hemolin; insect immunit 99.8 3.5E-18 1.2E-22 116.9 15.4 124 4-131 2-189 (395)
58 3qs7_E FL cytokine receptor; i 99.8 1.2E-18 4.1E-23 121.1 13.1 124 17-142 233-413 (423)
59 4fmk_A Poliovirus receptor-rel 99.8 2.3E-18 7.8E-23 109.1 13.2 125 18-142 8-218 (225)
60 4frw_A Poliovirus receptor-rel 99.8 8.3E-19 2.8E-23 110.7 10.9 122 17-140 5-208 (218)
61 3ejj_X Macrophage colony-stimu 99.8 2.5E-18 8.4E-23 113.2 13.4 123 17-142 95-280 (289)
62 3rjd_A High affinity immunoglo 99.8 2.8E-18 9.6E-23 111.4 13.1 120 8-141 1-165 (262)
63 2x1w_L Vascular endothelial gr 99.8 5.2E-19 1.8E-23 112.3 9.3 121 17-141 13-205 (213)
64 3knb_B Obscurin-like protein 1 99.8 8E-19 2.8E-23 100.3 9.2 92 7-141 12-103 (107)
65 2y25_A Myomesin; structural pr 99.8 1.6E-18 5.5E-23 115.4 12.0 128 6-140 5-197 (317)
66 2ec8_A MAST/stem cell growth f 99.8 3.8E-18 1.3E-22 120.9 14.6 131 7-142 210-410 (524)
67 1ry7_B FGFR-3, fibroblast grow 99.8 1.1E-18 3.9E-23 117.1 11.1 132 8-141 119-325 (334)
68 3b5h_A Cervical EMMPRIN, HAB18 99.8 6.3E-18 2.1E-22 104.7 13.6 115 20-142 7-182 (184)
69 3qs9_E FL cytokine receptor; i 99.8 1.8E-18 6.3E-23 123.1 12.7 123 17-141 233-412 (527)
70 2wim_A N-CAM 2, NCAM2, neural 99.8 7.7E-18 2.6E-22 111.0 14.7 131 7-141 3-189 (291)
71 2ifg_A High affinity nerve gro 99.8 4.6E-19 1.6E-23 120.1 9.0 130 7-142 157-344 (347)
72 3jz7_A MCAR, CAR, coxsackievir 99.8 7.4E-19 2.5E-23 110.9 9.3 124 17-141 6-210 (214)
73 1hng_A CD2; T lymphocyte adhes 99.8 2E-19 6.8E-24 111.3 6.6 119 20-140 5-173 (176)
74 2r15_A Myomesin-1; sarcomeric 99.8 1.8E-18 6.1E-23 109.2 11.1 115 25-141 16-208 (212)
75 1p6f_A NKP46, natural cytotoxi 99.8 1.1E-18 3.8E-23 113.1 10.3 130 6-141 5-189 (242)
76 2v5m_A Dscam; neurobiology SPL 99.8 3.8E-18 1.3E-22 116.6 13.3 120 19-141 220-387 (388)
77 3kld_A Contactin 4, axcam, BIG 99.8 1.5E-18 5E-23 119.0 11.2 119 8-131 5-182 (384)
78 2y23_A Myomesin; structural pr 99.8 4.2E-18 1.4E-22 113.2 13.0 121 20-142 116-311 (312)
79 1itb_B Type 1 interleukin-1 re 99.8 1.5E-18 5.1E-23 115.7 10.8 118 21-142 113-313 (315)
80 4f80_A Butyrophilin subfamily 99.8 1.5E-17 5.2E-22 106.3 14.7 123 17-141 10-211 (226)
81 3mj6_A Junctional adhesion mol 99.8 2.8E-18 9.7E-23 112.0 10.6 124 17-141 11-235 (268)
82 1sy6_A T-cell surface glycopro 99.8 6.4E-19 2.2E-23 111.4 7.0 109 24-142 16-203 (204)
83 3o4o_C Interleukin-1 receptor 99.8 1.7E-18 5.7E-23 116.6 9.2 130 7-141 17-218 (339)
84 1nkr_A P58-CL42 KIR; inhibitor 99.8 1.1E-17 3.8E-22 105.3 12.2 129 6-142 6-201 (201)
85 3oq3_B IFN-alpha/beta binding 99.8 2.3E-18 8E-23 115.7 9.6 117 22-142 139-329 (329)
86 1cs6_A Axonin-1; neural cell a 99.8 8E-18 2.7E-22 114.8 11.9 119 7-130 3-182 (382)
87 3qs9_E FL cytokine receptor; i 99.8 6E-18 2E-22 120.4 11.2 131 5-141 321-508 (527)
88 1jbj_A CD3 epsilon and gamma e 99.8 2.7E-18 9.1E-23 107.1 8.3 100 21-131 9-178 (186)
89 1e07_A Carcinoembryonic antige 99.8 2.9E-17 9.9E-22 118.9 14.9 119 19-141 475-638 (642)
90 3mtr_A N-CAM-1, NCAM-1, neural 99.8 5.3E-17 1.8E-21 103.0 14.3 120 7-131 18-198 (215)
91 2ec8_A MAST/stem cell growth f 99.8 2.8E-18 9.7E-23 121.6 8.6 135 5-141 307-508 (524)
92 3d9a_L Light chain of hyhel10 99.7 1.1E-17 3.6E-22 105.9 9.7 115 17-131 7-202 (213)
93 3vh8_G Killer cell immunoglobu 99.7 1.3E-17 4.4E-22 111.4 10.6 128 5-141 21-213 (316)
94 2v5m_A Dscam; neurobiology SPL 99.7 2.8E-17 9.4E-22 112.3 12.1 130 7-141 102-304 (388)
95 4i0k_A CD276 antigen; immunogl 99.7 8.5E-18 2.9E-22 106.9 8.8 122 19-142 3-205 (222)
96 3qs7_E FL cytokine receptor; i 99.7 6E-17 2.1E-21 112.5 12.9 124 17-141 54-226 (423)
97 3dmk_A DOWN syndrome cell adhe 99.7 4.2E-17 1.5E-21 120.8 12.8 127 6-135 616-802 (816)
98 3rjd_A High affinity immunoglo 99.7 9.2E-17 3.1E-21 104.3 13.0 116 18-141 89-260 (262)
99 3qp3_A Titin; I-SET IG-like, s 99.7 6.4E-17 2.2E-21 91.5 10.4 95 4-141 4-98 (103)
100 1wit_A Twitchin 18TH IGSF modu 99.7 6.1E-17 2.1E-21 90.1 10.1 91 7-142 1-93 (93)
101 4dkd_C Macrophage colony-stimu 99.7 1.5E-17 5.3E-22 109.6 8.8 123 17-142 95-280 (292)
102 2zg1_A Sialic acid-binding IG- 99.7 1.1E-16 3.6E-21 101.3 12.2 124 17-141 6-213 (214)
103 2o26_X MAST/stem cell growth f 99.7 9.2E-17 3.1E-21 105.9 12.3 122 6-141 10-181 (290)
104 2cqv_A MLCK, myosin light chai 99.7 2.2E-16 7.5E-21 90.9 12.4 47 6-56 5-51 (114)
105 2if7_A SLAM family member 6; N 99.7 5.1E-17 1.7E-21 101.8 10.4 119 17-137 4-186 (193)
106 1e07_A Carcinoembryonic antige 99.7 6.7E-17 2.3E-21 117.0 12.5 114 17-141 387-555 (642)
107 1g1c_A Immunoglobulin-like dom 99.7 1.1E-16 3.9E-21 89.8 10.9 93 7-141 4-96 (99)
108 4fqp_A Poliovirus receptor; im 99.7 4.5E-17 1.5E-21 108.6 10.7 132 6-142 115-303 (313)
109 2kdg_A Myotilin; immonoglobuli 99.7 8.8E-17 3E-21 90.4 10.4 95 5-141 2-96 (100)
110 2y25_A Myomesin; structural pr 99.7 7.4E-17 2.5E-21 107.3 11.3 117 23-141 110-313 (317)
111 3dmk_A DOWN syndrome cell adhe 99.7 7E-17 2.4E-21 119.6 12.3 121 7-141 342-524 (816)
112 2ocw_A Polymeric-immunoglobuli 99.7 1.5E-16 5.1E-21 114.0 13.5 134 5-142 328-545 (585)
113 3sbw_C Programmed cell death 1 99.7 2.5E-16 8.6E-21 100.0 13.1 123 17-141 7-209 (222)
114 3u83_A Poliovirus receptor-rel 99.7 5.9E-17 2E-21 108.6 10.6 135 5-142 127-319 (331)
115 4dep_C Interleukin-1 receptor 99.7 3.9E-17 1.3E-21 110.3 9.7 123 17-141 13-215 (349)
116 1u2h_A APEG-1, aortic preferen 99.7 1.7E-16 5.7E-21 89.1 10.6 94 6-141 3-96 (99)
117 3p3y_A Neurofascin; IG domains 99.7 2.2E-16 7.4E-21 108.2 13.3 121 17-141 122-309 (404)
118 1wio_A CD4, T-cell surface gly 99.7 1E-16 3.6E-21 108.9 11.5 109 22-141 107-291 (363)
119 3puc_A Titin; I-SET IG-like do 99.7 1.5E-16 5.2E-21 89.2 10.3 94 5-141 3-96 (99)
120 1b6u_A KIR2DL3, P58 killer cel 99.7 8.5E-17 2.9E-21 105.1 10.5 128 6-141 5-199 (257)
121 2yr3_A Myosin light chain kina 99.7 6.2E-17 2.1E-21 91.0 8.6 93 4-142 7-99 (99)
122 1vca_A VCAM-D1,2, human vascul 99.7 2E-16 6.9E-21 99.8 11.7 119 20-141 10-195 (202)
123 1lk3_L 9D7 light chain; antige 99.7 1.3E-16 4.3E-21 100.9 10.7 114 18-131 7-201 (210)
124 3vh8_G Killer cell immunoglobu 99.7 1E-16 3.5E-21 107.1 10.7 116 23-142 130-312 (316)
125 3oq3_B IFN-alpha/beta binding 99.7 5.2E-17 1.8E-21 109.2 8.8 118 19-141 37-222 (329)
126 2c1o_A IGK-C protein; FAB frag 99.7 1.7E-16 5.8E-21 103.0 11.0 121 8-131 38-244 (254)
127 2pet_A Lutheran blood group gl 99.7 2.2E-17 7.6E-22 105.4 6.6 73 17-89 6-99 (231)
128 1nct_A Titin; cell adhesion, g 99.7 1.1E-16 3.8E-21 91.2 8.8 95 5-142 11-105 (106)
129 3mj8_L Stimulatory hamster ant 99.7 8.7E-17 3E-21 101.7 9.2 114 17-131 7-202 (213)
130 3juy_B 3B3 single chain varian 99.7 7.3E-16 2.5E-20 100.2 13.5 132 8-142 6-256 (256)
131 3irg_A Titin; IG-like, titin, 99.7 2E-16 6.9E-21 88.8 9.1 95 7-142 4-98 (100)
132 1wio_A CD4, T-cell surface gly 99.7 7.4E-17 2.5E-21 109.6 8.6 120 19-141 184-361 (363)
133 2edj_A Roundabout homolog 2; K 99.7 6.1E-16 2.1E-20 87.0 11.1 93 4-141 4-96 (100)
134 2e7c_A Myosin-binding protein 99.7 9E-16 3.1E-20 88.9 11.6 94 7-141 20-113 (118)
135 2ghw_B Anti-SARS SCFV antibody 99.7 2.1E-15 7.1E-20 97.5 14.4 124 19-142 10-241 (247)
136 3nl4_L Antigen binding fragmen 99.7 6.3E-16 2.2E-20 97.7 11.7 72 17-88 7-92 (213)
137 3auv_A SC-DSFV derived from th 99.7 1E-15 3.5E-20 100.7 13.1 78 8-88 12-103 (276)
138 3sob_L Antibody light chain; b 99.7 7.2E-16 2.5E-20 98.8 12.1 115 17-131 30-225 (237)
139 2p1y_A Bispecific alpha/beta T 99.7 5.2E-16 1.8E-20 99.7 11.3 71 17-88 6-94 (238)
140 3o4o_C Interleukin-1 receptor 99.7 4.3E-17 1.5E-21 109.7 6.4 119 20-140 129-332 (339)
141 3uzq_A Anti-dengue MAB 4E11; d 99.7 7.9E-16 2.7E-20 99.9 12.1 126 17-142 7-243 (253)
142 1ry7_B FGFR-3, fibroblast grow 99.7 6.9E-18 2.4E-22 113.3 2.4 120 17-141 14-214 (334)
143 2dm3_A KIAA0992 protein, palla 99.7 1.4E-16 4.7E-21 91.1 7.5 97 3-141 4-100 (110)
144 3mjg_X Beta-type platelet-deri 99.7 2.7E-16 9.3E-21 103.6 9.6 63 17-88 6-72 (289)
145 2dm2_A Palladin; beta-sandwich 99.7 8.4E-16 2.9E-20 87.9 10.4 95 5-141 5-100 (110)
146 2lvc_A Obscurin-like protein 1 99.7 2E-16 6.9E-21 87.7 7.5 80 6-88 2-82 (91)
147 3ejj_X Macrophage colony-stimu 99.7 5.6E-16 1.9E-20 102.0 10.8 122 8-141 4-179 (289)
148 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 3.8E-15 1.3E-19 97.0 14.6 72 17-88 9-97 (256)
149 3umt_A SCFV heavy chain and li 99.7 2.3E-15 7.7E-20 97.9 13.6 125 18-142 9-244 (256)
150 3irg_B Obscurin-like protein 1 99.7 5.1E-16 1.8E-20 88.3 9.2 94 5-141 10-103 (107)
151 3kvq_A Vascular endothelial gr 99.7 4.2E-16 1.4E-20 88.8 8.5 48 4-55 6-53 (108)
152 4fom_A Poliovirus receptor-rel 99.7 4.4E-17 1.5E-21 108.3 5.0 123 17-141 120-298 (308)
153 3esu_F Antibody 14B7* light ch 99.7 8.1E-15 2.8E-19 94.8 15.6 72 17-88 10-95 (250)
154 4dkd_C Macrophage colony-stimu 99.7 1.3E-16 4.4E-21 105.1 7.1 123 6-141 2-179 (292)
155 2rcj_C Light chain; immunoglob 99.7 1.2E-15 4.1E-20 108.1 12.5 120 7-131 113-305 (523)
156 3bfo_A Mucosa-associated lymph 99.7 1.7E-15 5.6E-20 83.9 10.4 83 8-141 3-85 (91)
157 4dep_C Interleukin-1 receptor 99.7 1.4E-16 4.7E-21 107.6 7.1 119 18-141 127-331 (349)
158 3pv7_A B7-H6, IG-like domain-c 99.7 1.8E-15 6.3E-20 97.8 12.1 125 17-141 9-224 (248)
159 3r06_A Anti-mouse CD3epsilon a 99.7 1.1E-15 3.6E-20 96.7 10.7 72 17-88 7-92 (213)
160 2ocw_A Polymeric-immunoglobuli 99.7 2.9E-15 9.8E-20 107.3 14.0 123 17-141 6-219 (585)
161 1fhg_A Telokin; immunoglobulin 99.7 1.1E-15 3.9E-20 92.5 10.2 80 5-88 38-119 (154)
162 3s96_B 3B5H10 FAB light chain; 99.7 7.1E-16 2.4E-20 97.7 9.7 71 17-88 7-96 (218)
163 1moe_A Anti-CEA MAB T84.66; an 99.7 3.2E-15 1.1E-19 96.1 12.8 72 17-88 7-96 (240)
164 1nqb_A Single-chain antibody f 99.7 6.4E-15 2.2E-19 96.0 14.2 125 17-141 6-231 (256)
165 1ccz_A Protein (CD58); LFA-3, 99.7 2.3E-16 7.7E-21 97.2 6.8 114 20-138 4-166 (171)
166 4fom_A Poliovirus receptor-rel 99.7 5.6E-16 1.9E-20 103.0 9.2 123 19-141 7-208 (308)
167 1gxe_A Myosin binding protein 99.7 1.2E-15 4.1E-20 90.9 9.6 113 8-141 15-137 (139)
168 2yuz_A Myosin-binding protein 99.7 1.1E-15 3.8E-20 86.2 9.0 46 6-57 5-50 (100)
169 1dr9_A B7-1 (CD80), T lymphocy 99.7 1.1E-15 3.7E-20 95.9 9.9 118 20-139 3-197 (201)
170 3cx2_A Myosin-binding protein 99.7 4.5E-15 1.5E-19 84.7 11.5 102 7-142 3-107 (108)
171 2bk8_A Connectin, M1, titin he 99.7 7E-15 2.4E-19 82.2 12.1 86 17-142 7-93 (97)
172 4fqp_A Poliovirus receptor; im 99.7 1.3E-15 4.5E-20 101.5 10.7 124 17-141 6-213 (313)
173 3gkz_A Anti-methamphetamine si 99.7 8.8E-15 3E-19 95.1 14.3 72 17-88 14-107 (257)
174 2y23_A Myomesin; structural pr 99.7 3.5E-15 1.2E-19 99.0 12.6 113 17-130 7-190 (312)
175 1hnf_A CD2; T lymphocyte adhes 99.7 3.7E-16 1.2E-20 97.2 7.4 114 18-132 6-171 (182)
176 1waa_A Titin; metal binding pr 99.7 1.3E-15 4.3E-20 84.8 8.8 77 7-88 4-81 (93)
177 1nfd_E H57 FAB; complex (immun 99.6 1.6E-16 5.3E-21 100.5 5.6 114 18-131 6-201 (212)
178 3omz_A Human vdelta1 gamma del 99.6 2.4E-15 8.1E-20 98.0 11.2 78 8-88 2-100 (259)
179 2v9t_A Roundabout homolog 1; s 99.6 8.4E-16 2.9E-20 88.8 7.9 99 5-141 6-107 (117)
180 3u83_A Poliovirus receptor-rel 99.6 3.4E-16 1.2E-20 104.8 6.9 123 17-141 20-228 (331)
181 2wng_A Tyrosine-protein phosph 99.6 3.2E-15 1.1E-19 100.2 11.5 72 17-89 9-96 (327)
182 2dru_A Chimera of CD48 antigen 99.6 5.6E-15 1.9E-19 91.6 11.7 113 17-131 5-170 (180)
183 2wng_A Tyrosine-protein phosph 99.6 9E-16 3.1E-20 102.9 8.7 118 21-139 127-316 (327)
184 3bkj_L WO2 IGG2A FAB fragment 99.6 2.1E-15 7.3E-20 97.8 10.2 115 17-131 40-240 (252)
185 3v2a_R Vascular endothelial gr 99.6 1.5E-17 5.3E-22 122.2 0.0 120 21-142 559-755 (772)
186 2kkq_A Myotilin; unknown funct 99.6 3.1E-15 1.1E-19 86.5 9.7 48 4-55 11-58 (116)
187 1q0x_L FAB 9B1, light chain; a 99.6 1.6E-15 5.3E-20 95.9 9.1 113 18-130 7-203 (212)
188 3tv3_L PGT128 light chain, IG 99.6 9.1E-16 3.1E-20 96.9 7.9 67 20-88 9-89 (211)
189 1wwb_X Protein (brain derived 99.6 6.2E-15 2.1E-19 83.5 10.4 96 5-141 1-96 (103)
190 2xzc_L FAB A.17 light chain; i 99.6 5.5E-15 1.9E-19 93.7 11.3 114 18-131 7-204 (216)
191 3caf_A Fibroblast growth facto 99.6 2.3E-15 7.8E-20 84.6 7.9 94 8-141 4-99 (100)
192 1z7z_I Intercellular adhesion 99.6 1E-14 3.6E-19 101.5 12.9 80 5-89 82-164 (450)
193 3bqu_C 3H6 FAB light chain; be 99.6 5.8E-16 2E-20 99.2 6.0 115 17-131 29-224 (233)
194 2znx_A SCFV; fluorotryptohpan, 99.6 1.8E-14 6.3E-19 93.0 12.9 72 17-88 7-92 (242)
195 1svz_A Immunoglobulin;, single 99.6 1.1E-14 3.9E-19 94.0 11.8 72 17-88 7-97 (247)
196 1f3r_B FV antibody fragment; I 99.6 4.8E-15 1.6E-19 96.5 9.9 71 18-88 7-99 (257)
197 2nzi_A Titin; IG-domain, FNIII 99.6 2.1E-14 7.2E-19 95.1 13.0 112 19-131 112-279 (305)
198 2oz4_A Intercellular adhesion 99.6 2.8E-15 9.4E-20 97.9 8.6 108 20-142 107-263 (265)
199 1itb_B Type 1 interleukin-1 re 99.6 2.4E-16 8.3E-21 105.0 3.6 113 18-132 12-189 (315)
200 3ux9_B SCFV antibody; five hel 99.6 3E-14 1E-18 92.5 13.2 72 17-88 8-95 (256)
201 2eo9_A Roundabout homolog 1; b 99.6 3.8E-15 1.3E-19 86.2 7.8 80 5-89 5-84 (118)
202 3eow_R Poliovirus receptor; im 99.6 1.6E-15 5.3E-20 96.5 6.7 120 18-139 6-208 (221)
203 2rcj_C Light chain; immunoglob 99.6 1.9E-14 6.4E-19 102.0 12.5 120 7-131 218-409 (523)
204 2lu7_A Obscurin-like protein 1 99.6 3.2E-15 1.1E-19 81.7 6.6 67 18-86 3-70 (84)
205 2dav_A SLOW MYBP-C, myosin-bin 99.6 1.6E-14 5.4E-19 84.4 9.9 97 8-141 7-109 (126)
206 1qgc_4 Protein (immunoglobulin 99.6 8.6E-15 2.9E-19 101.5 10.3 104 24-128 129-319 (438)
207 1qgc_4 Protein (immunoglobulin 99.6 6.3E-15 2.1E-19 102.1 9.5 115 17-131 7-206 (438)
208 1qok_A MFE-23 recombinant anti 99.6 2.4E-14 8.3E-19 94.4 11.6 72 17-88 32-126 (282)
209 4dzb_B Vbeta2 (MAIT T cell rec 99.6 1.5E-14 5E-19 93.4 10.1 71 17-87 7-97 (246)
210 1gl4_B Basement membrane-speci 99.6 5.7E-14 2E-18 78.6 11.3 88 8-142 9-97 (98)
211 1c1e_H Catalytic antibody 1E9 99.6 9.2E-15 3.2E-19 92.8 9.0 72 17-88 6-100 (219)
212 2edn_A Myosin-binding protein 99.6 1.8E-14 6E-19 83.3 9.3 100 7-142 11-115 (118)
213 2ckn_A Basic fibroblast growth 99.6 6.9E-15 2.4E-19 82.0 7.4 87 7-141 8-94 (95)
214 2ens_A Advanced glycosylation 99.6 7.2E-15 2.5E-19 82.1 7.4 44 7-54 9-52 (96)
215 2j6e_L IGM, FAB light chain; a 99.6 1.6E-14 5.6E-19 92.4 9.9 114 18-131 26-224 (234)
216 1z7z_I Intercellular adhesion 99.6 4.1E-15 1.4E-19 103.5 7.4 107 20-142 292-448 (450)
217 3so5_A LIG-3, leucine-rich rep 99.6 5.4E-14 1.9E-18 80.1 10.6 104 5-142 7-112 (112)
218 2dlt_A Myosin binding protein 99.6 1.6E-14 5.3E-19 82.1 8.3 80 5-89 5-85 (106)
219 2eny_A Obscurin; beta-sandwich 99.6 8.8E-15 3E-19 83.0 6.8 78 7-88 7-86 (104)
220 2edf_A Obscurin; beta-sandwich 99.6 2E-14 6.7E-19 81.2 8.1 79 5-88 5-84 (103)
221 2oz4_A Intercellular adhesion 99.6 6.8E-14 2.3E-18 91.2 11.5 113 22-141 14-180 (265)
222 1x44_A Myosin-binding protein 99.6 1.8E-14 6.3E-19 81.4 7.6 77 7-88 6-85 (103)
223 2gjj_A A21 single-chain antibo 99.6 2E-13 6.9E-18 89.3 13.3 77 9-88 6-102 (264)
224 2jll_A NCAM2, neural cell adhe 99.6 8.7E-14 3E-18 95.0 11.9 123 5-131 97-277 (389)
225 3v2a_R Vascular endothelial gr 99.5 1.1E-14 3.9E-19 107.0 7.8 122 19-141 232-417 (772)
226 3d9a_H Heavy chain of hyhel10 99.5 1.3E-14 4.4E-19 91.7 7.0 71 18-88 7-99 (210)
227 2e6p_A Obscurin-like protein 1 99.5 2.4E-14 8.3E-19 81.0 7.2 77 7-88 6-86 (104)
228 1mju_H Immunoglobulin MS6-12; 99.5 8.3E-14 2.9E-18 89.1 10.2 72 17-88 6-100 (227)
229 1wwc_A Protein (NT-3 growth fa 99.5 9.1E-14 3.1E-18 80.4 9.5 48 3-57 3-50 (118)
230 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 3.1E-14 1.1E-18 90.6 8.1 71 18-88 7-102 (222)
231 2edk_A Myosin-binding protein 99.5 1.3E-14 4.5E-19 81.7 5.6 78 6-88 6-88 (101)
232 1pz5_B Heavy chain of FAB (SYA 99.5 2.1E-14 7.2E-19 91.3 7.1 71 18-88 7-102 (220)
233 2gki_A Nuclease; anti-DNA anti 99.5 2.6E-13 8.7E-18 89.9 12.6 71 18-88 29-122 (291)
234 2k1m_A Myosin-binding protein 99.5 1.2E-13 4.1E-18 76.9 9.1 74 8-86 8-82 (95)
235 3m45_A Cell adhesion molecule 99.5 3.1E-13 1.1E-17 76.6 10.7 100 6-141 4-104 (108)
236 3pl6_D MBP peptide / T-cell re 99.5 1E-13 3.5E-18 90.6 9.8 71 17-88 32-121 (268)
237 3qr2_A Basigin; CD147, EMMPRIN 99.5 7.3E-14 2.5E-18 82.8 8.3 45 5-53 18-62 (137)
238 2e7b_A Obscurin; IG-like domai 99.5 1E-13 3.5E-18 78.2 8.6 76 5-85 5-81 (103)
239 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 3.7E-13 1.3E-17 88.1 12.4 78 8-88 15-111 (268)
240 1pd6_A Cardiac MYBP-C;, myosin 99.5 1.6E-13 5.5E-18 77.8 9.3 77 6-86 13-91 (104)
241 2yuv_A Myosin-binding protein 99.5 2.2E-13 7.5E-18 76.5 9.7 75 7-86 6-82 (100)
242 3nfj_J T cell receptor beta ch 99.5 1.7E-13 5.9E-18 88.4 10.4 72 17-88 7-95 (245)
243 2fbj_H IGA-kappa J539 FAB (hea 99.5 5.8E-13 2E-17 84.8 12.5 71 18-88 7-100 (220)
244 4hwu_A Fibroblast growth facto 99.5 2.7E-13 9.4E-18 75.4 9.5 36 17-55 7-42 (95)
245 2cr6_A KIAA1556 protein, obscu 99.5 8.6E-14 2.9E-18 80.2 7.5 74 9-86 14-89 (115)
246 3fku_X Neutralizing antibody F 99.5 1.6E-13 5.3E-18 90.5 9.7 71 18-88 7-100 (280)
247 4ei6_B Vbeta16 XV19 type II na 99.5 3E-13 1E-17 87.2 10.6 71 17-88 8-97 (245)
248 2dm7_A KIAA1556 protein; beta- 99.5 1.8E-13 6E-18 77.9 8.4 78 5-88 5-83 (108)
249 2e6q_A Obscurin-like protein 1 99.5 5.6E-13 1.9E-17 76.4 10.4 73 7-85 7-90 (112)
250 3q5y_A TCR N15 beta; IG, T cel 99.5 3.1E-13 1E-17 86.9 10.3 70 17-87 8-95 (240)
251 3o3u_N Maltose-binding peripla 99.5 6.7E-14 2.3E-18 100.3 7.3 71 18-89 373-454 (581)
252 1he7_A High affinity nerve gro 99.5 3.8E-13 1.3E-17 78.5 9.2 64 25-89 14-85 (126)
253 2eo1_A OBSCN protein, cDNA FLJ 99.5 1.1E-13 3.7E-18 78.0 6.7 80 6-87 6-86 (102)
254 2cpc_A KIAA0657 protein; immun 99.5 3.3E-13 1.1E-17 77.3 8.9 83 4-88 6-89 (113)
255 1epf_A NCAM, protein (neural c 99.5 1.5E-13 5E-18 85.3 7.8 83 5-91 97-179 (191)
256 2edh_A Obscurin; structural ge 99.5 6.4E-13 2.2E-17 76.2 9.9 74 7-86 18-92 (113)
257 2wqr_A IG epsilon chain C regi 99.5 1.9E-14 6.4E-19 96.5 3.5 115 17-131 119-309 (323)
258 3m8o_H Immunoglobulin A1 heavy 99.5 9.7E-13 3.3E-17 83.6 11.2 71 18-88 7-102 (221)
259 2cry_A KIN of IRRE-like protei 99.5 1.1E-14 3.7E-19 84.8 1.8 101 3-141 9-111 (122)
260 2v44_A NCAM2, neural cell adhe 99.5 2.3E-13 7.9E-18 84.3 7.9 84 5-92 93-176 (189)
261 1za6_B IGG heavy chain; immuno 99.5 6.5E-14 2.2E-18 94.6 5.7 71 18-88 7-100 (344)
262 3rbg_A Cytotoxic and regulator 99.5 1.7E-12 6E-17 75.6 11.0 35 17-51 7-41 (124)
263 2dku_A KIAA1556 protein; beta- 99.5 9.8E-13 3.3E-17 74.1 9.5 75 6-85 6-81 (103)
264 1dee_B IGM RF 2A2; FAB-IBP com 99.5 3E-12 1E-16 81.7 12.7 71 18-88 7-100 (223)
265 3nl4_H Antigen binding fragmen 99.5 2.8E-13 9.7E-18 85.8 7.6 72 17-88 5-96 (215)
266 3s35_X Vascular endothelial gr 99.4 3.4E-12 1.2E-16 74.0 11.4 34 18-52 15-50 (122)
267 2cr3_A Basic fibroblast growth 99.4 2.3E-13 7.9E-18 76.3 6.2 68 17-89 9-76 (99)
268 3qib_D 2B4 beta chain; IG doma 99.4 3.2E-13 1.1E-17 88.4 7.6 71 17-88 33-122 (270)
269 2wbj_D OB TCR; transmembrane, 99.4 2.8E-12 9.6E-17 84.4 12.2 78 8-88 24-121 (279)
270 3rbs_A Myomesin-1; immunoglobu 99.4 4.5E-13 1.5E-17 84.8 7.9 76 8-89 117-193 (207)
271 1hxm_B Gamma-delta T-cell rece 99.4 5.7E-12 1.9E-16 81.3 12.9 72 17-88 7-101 (242)
272 1dn0_B IGM-kappa cold agglutin 99.4 4.9E-12 1.7E-16 81.2 12.4 70 18-87 7-98 (232)
273 2wqr_A IG epsilon chain C regi 99.4 1.4E-13 4.7E-18 92.3 5.1 103 27-130 25-202 (323)
274 2vol_A Murine IGG FC; FC, zinc 99.4 1.2E-13 4.2E-18 87.2 3.7 66 23-89 15-90 (207)
275 1igt_B IGG2A intact antibody - 99.4 1.3E-12 4.6E-17 90.9 8.8 71 18-88 7-100 (444)
276 1iga_A IGA1; immunoglobulin; N 99.4 9.1E-12 3.1E-16 87.5 12.9 72 17-88 7-101 (475)
277 3uto_A Twitchin; kinase, muscl 99.4 5.6E-12 1.9E-16 90.7 12.1 93 7-142 481-573 (573)
278 4fa8_A Secreted protein BARF1; 99.4 2.3E-13 7.8E-18 85.9 4.2 84 5-91 103-190 (203)
279 2xqy_G A13-D6.3 monoclonal ant 99.4 3.7E-12 1.3E-16 83.2 10.1 72 17-88 12-106 (261)
280 2r15_A Myomesin-1; sarcomeric 99.4 7E-12 2.4E-16 78.8 10.8 73 17-90 123-197 (212)
281 3to4_D NKT vbeta2 (mouse varia 99.4 5.6E-12 1.9E-16 81.8 10.5 71 17-87 7-94 (253)
282 3b5h_A Cervical EMMPRIN, HAB18 99.4 5.9E-12 2E-16 77.6 10.1 84 4-90 79-170 (184)
283 2w59_A IGY FCU3-4; immunoglobu 99.4 2.8E-13 9.7E-18 86.9 4.1 80 6-89 10-99 (231)
284 3liz_H 4C3 monoclonal antibody 99.4 7.7E-13 2.6E-17 85.9 6.2 71 18-88 7-100 (253)
285 2xot_A Amphoterin-induced prot 99.4 5.6E-12 1.9E-16 85.9 10.3 106 17-133 252-359 (361)
286 1gsm_A Madcam-1, mucosal addre 99.4 1.2E-10 4E-15 73.8 15.3 101 20-128 16-121 (210)
287 1z9m_A GAPA225; nectin-like, I 99.4 7E-12 2.4E-16 74.9 9.1 93 17-141 44-136 (145)
288 1igt_B IGG2A intact antibody - 99.4 4.5E-13 1.5E-17 93.2 4.4 66 23-89 252-327 (444)
289 1jhl_L IGG1-kappa D11.15 FV (l 99.4 2.3E-11 7.8E-16 69.1 10.7 100 17-142 7-107 (108)
290 2c5d_C AXL oncogene, tyrosine- 99.4 1.2E-11 4.1E-16 76.9 10.4 77 4-90 102-179 (195)
291 2yd6_A PTPRD protein; hydrolas 99.4 9.4E-12 3.2E-16 78.5 10.0 78 9-90 109-190 (212)
292 2a38_A Titin; Z1Z2, structural 99.4 6.8E-12 2.3E-16 77.8 9.2 80 7-90 102-182 (194)
293 2iep_A Muscle-specific kinase 99.4 3.4E-12 1.2E-16 79.1 7.7 80 5-90 97-176 (192)
294 2yd1_A Tyrosine-protein phosph 99.4 8.4E-12 2.9E-16 78.7 9.6 76 9-90 111-186 (212)
295 3zyj_A Leucine-rich repeat-con 99.3 1E-11 3.5E-16 86.6 10.6 90 8-141 341-431 (440)
296 3r08_E T-cell surface glycopro 99.3 5.6E-13 1.9E-17 71.9 3.2 60 17-87 5-65 (82)
297 1igy_B IGG1 intact antibody MA 99.3 7.9E-13 2.7E-17 91.8 4.7 72 17-88 5-99 (434)
298 2id5_A Lingo-1, leucine rich r 99.3 4E-12 1.4E-16 89.3 7.9 85 17-142 391-476 (477)
299 2wv3_A Neuroplastin; igcam, me 99.3 2E-11 6.8E-16 75.7 10.2 85 4-91 88-178 (190)
300 1i1c_A IGG2A, IG gamma-2A chai 99.3 4.2E-13 1.4E-17 86.7 2.5 66 23-89 29-104 (239)
301 2v5t_A NCAM2, N-CAM 2, neural 99.3 8.1E-12 2.8E-16 77.1 7.6 82 6-90 94-175 (189)
302 3n9g_H FAB fragment of MAB CR4 99.3 2.7E-11 9.3E-16 77.5 10.2 71 18-88 7-100 (230)
303 3s97_C Contactin-1; carbonic a 99.3 1.3E-11 4.4E-16 76.8 8.4 76 8-90 113-188 (201)
304 3zyi_A Leucine-rich repeat-con 99.3 6.8E-12 2.3E-16 87.8 7.5 89 8-141 352-441 (452)
305 1rhf_A Tyrosine-protein kinase 99.3 3.4E-11 1.2E-15 74.0 9.8 74 4-89 94-168 (182)
306 2vsd_A CHIR AB1; immune system 99.3 4.6E-12 1.6E-16 71.8 5.1 73 7-88 4-77 (105)
307 2vr9_A Roundabout 1, ROBO; imm 99.3 1.6E-11 5.4E-16 77.6 8.0 78 8-89 108-192 (217)
308 3mjg_X Beta-type platelet-deri 99.3 2.6E-11 8.9E-16 79.7 9.0 96 8-141 181-276 (289)
309 2q20_A VK1 O18/O8 germline lig 99.3 4.3E-11 1.5E-15 68.1 8.5 100 17-142 9-109 (109)
310 1f97_A Junction adhesion molec 99.3 1.2E-11 4.1E-16 77.6 6.6 83 5-91 101-193 (212)
311 2j8h_A Titin, connectin; cardi 99.3 2.7E-11 9.2E-16 75.3 8.1 71 19-90 112-184 (197)
312 1h5b_A Murine T cell receptor 99.3 5.3E-11 1.8E-15 68.2 8.5 31 17-48 7-37 (113)
313 3k0w_A Mucosa-associated lymph 99.3 2.9E-11 9.8E-16 76.7 8.1 69 9-89 119-187 (218)
314 2qsq_A Carcinoembryonic antige 99.3 2E-11 7E-16 69.8 6.6 100 19-141 8-107 (111)
315 2v9r_A Roundabout homolog 1; p 99.2 3.3E-11 1.1E-15 75.6 8.1 71 17-90 117-188 (212)
316 2e27_L Anti-ciguatoxin antibod 99.2 5.7E-11 1.9E-15 68.8 8.4 32 17-48 9-40 (119)
317 2rgs_A I, IG gamma-2B heavy ch 99.2 2.7E-11 9.2E-16 77.0 7.7 125 7-136 8-154 (218)
318 2d3v_A Leukocyte immunoglobuli 99.2 1.2E-11 4.1E-16 77.2 5.9 67 21-89 109-178 (196)
319 1xau_A B- and T-lymphocyte att 99.2 2.9E-10 1E-14 63.7 10.7 37 17-53 20-57 (122)
320 3shs_A HOC head outer capsid p 99.2 2.5E-10 8.6E-15 74.2 12.1 114 17-140 8-180 (304)
321 3tv3_H PGT128 heavy chain, IG 99.2 3.1E-11 1E-15 77.8 8.0 70 18-87 7-106 (239)
322 2fbo_J V1V2;, variable region- 99.2 2.2E-11 7.5E-16 78.3 7.2 72 17-89 142-235 (250)
323 2ywz_A NEW antigen receptor va 99.2 7.5E-11 2.6E-15 67.4 8.6 32 17-48 6-39 (111)
324 1op3_H FAB 2G12, heavy chain; 99.2 4.2E-10 1.4E-14 71.7 12.8 118 18-135 7-164 (225)
325 1ugn_A LIR1, leukocyte immunog 99.2 3.9E-11 1.3E-15 74.9 7.8 69 21-91 110-181 (198)
326 4hwn_A FC receptor-like A; FCR 99.2 3.8E-11 1.3E-15 68.3 6.9 71 7-89 7-82 (108)
327 3sgj_C Human FCG3A receptor; r 99.2 6.5E-11 2.2E-15 74.6 8.6 73 5-89 86-159 (204)
328 3u2s_H PG9 heavy chain; greek 99.2 3.1E-11 1.1E-15 78.3 7.3 72 17-88 5-99 (248)
329 1mqk_L Antibody 7E2 FV fragmen 99.2 8.5E-11 2.9E-15 68.1 8.2 32 17-48 7-38 (120)
330 3mlr_H Human monoclonal anti-H 99.2 7.2E-11 2.5E-15 75.4 8.6 70 18-87 7-99 (226)
331 1iga_A IGA1; immunoglobulin; N 99.2 1E-10 3.5E-15 82.1 10.2 66 22-89 258-331 (475)
332 1uct_A Immunoglobulin alpha FC 99.2 4.2E-11 1.4E-15 76.2 7.5 75 8-90 106-180 (218)
333 1i8k_A Epidermal growth factor 99.2 8.6E-11 3E-15 66.6 8.0 32 17-48 7-38 (107)
334 3sob_H Antibody heavy chain, l 99.2 1.2E-10 4.1E-15 75.7 9.7 70 19-88 31-123 (256)
335 3lcy_A Titin; A-BAND, IG tande 99.2 6.4E-11 2.2E-15 73.4 7.9 73 18-91 110-184 (197)
336 3qhz_H Human monoclonal antibo 99.2 3.3E-11 1.1E-15 77.1 6.6 70 18-87 7-103 (232)
337 4gos_A V-SET domain-containing 99.2 3.7E-11 1.3E-15 70.1 6.1 36 105-141 83-118 (125)
338 1hzh_H IGG, immunoglobulin hea 99.2 1.3E-11 4.5E-16 86.2 4.9 65 23-88 261-335 (457)
339 3r4d_A CEA-related cell adhesi 99.2 1E-10 3.6E-15 73.2 8.3 65 23-90 122-186 (208)
340 1nbq_A JAM, junctional adhesio 99.2 1.7E-11 5.7E-16 76.8 4.6 82 5-90 104-194 (209)
341 3jz7_A MCAR, CAR, coxsackievir 99.2 1.9E-11 6.5E-16 76.7 4.9 81 5-90 118-199 (214)
342 1c5d_H Monoclonal antibody aga 99.2 4.4E-10 1.5E-14 71.1 11.1 118 18-135 7-158 (215)
343 3bae_H WO2 IGG2A FAB fragment 99.2 5.1E-10 1.8E-14 71.4 11.3 118 18-135 7-166 (228)
344 1qfw_M FV, antibody (anti beta 99.2 1.5E-10 5E-15 65.8 7.8 32 17-48 7-38 (108)
345 1fnl_A Low affinity immunoglob 99.2 2E-10 6.7E-15 70.4 8.9 63 19-89 96-159 (175)
346 2ptt_A CD48 antigen; CD244, CD 99.2 2.8E-10 9.4E-15 64.8 8.9 34 17-50 9-43 (110)
347 4gjt_B Poliovirus receptor-rel 99.2 1.4E-10 4.7E-15 67.5 7.7 106 17-141 6-115 (123)
348 3q0h_A T cell immunoreceptor w 99.2 1.8E-10 6.1E-15 66.5 8.0 32 18-50 10-43 (117)
349 1oll_A NK receptor; immune sys 99.2 1E-10 3.4E-15 72.6 7.4 73 8-89 99-171 (188)
350 3p2t_A Leukocyte immunoglobuli 99.2 1.2E-10 4E-15 72.7 7.7 66 22-89 110-177 (196)
351 4ffy_L DENV1-E111 single chain 99.2 7.7E-10 2.6E-14 64.5 10.7 32 17-48 7-42 (126)
352 2ny1_B T-cell surface glycopro 99.2 1.3E-10 4.6E-15 71.6 7.8 61 20-90 106-166 (184)
353 2coq_A NEW antigen receptor va 99.2 1.8E-10 6.2E-15 65.4 7.5 32 17-48 6-39 (108)
354 3moq_A NEW antigen receptor va 99.2 6.8E-10 2.3E-14 64.9 9.9 72 17-88 6-87 (126)
355 3ry4_A Low affinity immunoglob 99.2 2E-10 7E-15 69.8 8.0 62 20-89 94-156 (170)
356 2aty_A Complement receptor chi 99.2 2.4E-10 8.3E-15 78.3 9.2 66 23-89 180-255 (376)
357 1i3g_L Antibody FV fragment; a 99.2 2.8E-10 9.7E-15 64.9 8.1 32 17-48 10-41 (111)
358 1igy_B IGG1 intact antibody MA 99.1 9.2E-13 3.1E-17 91.5 -3.1 66 23-89 242-317 (434)
359 2x1w_L Vascular endothelial gr 99.1 2E-10 6.8E-15 72.6 7.6 73 18-91 112-195 (213)
360 2oyp_A Hepatitis A virus cellu 99.1 4.5E-10 1.5E-14 63.5 8.3 103 20-142 3-109 (109)
361 3khq_A B-cell antigen receptor 99.1 3.1E-10 1E-14 66.9 7.8 71 17-89 23-99 (133)
362 3udw_C Poliovirus receptor; PV 99.1 3.6E-10 1.2E-14 64.7 7.9 36 105-141 78-114 (118)
363 1sy6_A T-cell surface glycopro 99.1 3E-11 1E-15 76.1 3.5 65 24-91 126-191 (204)
364 1eaj_A Coxsackie virus and ade 99.1 1.7E-10 5.8E-15 66.7 6.5 109 17-141 11-123 (126)
365 1f2q_A High affinity immunoglo 99.1 1.7E-10 5.7E-15 70.8 6.7 62 20-89 94-156 (176)
366 3umt_A SCFV heavy chain and li 99.1 2.9E-10 9.8E-15 73.7 8.1 80 8-90 138-231 (256)
367 1bec_A 14.3.D T cell antigen r 99.1 2.4E-09 8.1E-14 68.8 12.1 119 17-136 5-158 (238)
368 1nkr_A P58-CL42 KIR; inhibitor 99.1 5.2E-10 1.8E-14 70.0 8.8 65 21-89 117-183 (201)
369 1j05_L T84.66 antibody, anti-C 99.1 3E-10 1E-14 64.8 7.0 32 17-48 7-42 (111)
370 2ifg_A High affinity nerve gro 99.1 2.6E-10 9E-15 77.1 7.7 67 23-90 258-332 (347)
371 1nqb_A Single-chain antibody f 99.1 4.6E-10 1.6E-14 73.0 8.6 80 8-90 121-219 (256)
372 1sq2_N Novel antigen receptor; 99.1 8.6E-10 2.9E-14 63.1 8.7 32 17-48 6-39 (113)
373 2yc1_B Single chain antibody f 99.1 4E-09 1.4E-13 63.1 11.9 38 8-48 16-53 (146)
374 1jbj_A CD3 epsilon and gamma e 99.1 7.9E-11 2.7E-15 73.1 4.5 57 23-89 119-175 (186)
375 2va4_A NCAM2, N-CAM 2, neural 99.1 4.5E-10 1.5E-14 69.3 7.9 81 6-91 93-181 (192)
376 3r0n_A Poliovirus receptor-rel 99.1 4E-10 1.4E-14 65.8 7.2 31 17-47 8-42 (128)
377 1pko_A Myelin oligodendrocyte 99.1 1.9E-09 6.5E-14 63.8 10.1 32 17-48 12-46 (139)
378 2jju_A Signal regulatory prote 99.1 4.7E-10 1.6E-14 65.5 7.4 32 17-48 9-41 (127)
379 2gi7_A GPVI protein; IG-like d 99.1 9.8E-11 3.4E-15 72.4 4.7 65 21-90 103-167 (184)
380 1xt5_A Variable region-contain 99.1 6.2E-10 2.1E-14 65.4 7.8 32 17-48 10-44 (135)
381 4i0k_A CD276 antigen; immunogl 99.1 1.2E-09 4.1E-14 69.1 9.4 71 21-91 120-194 (222)
382 1ncn_A T lymphocyte activation 99.1 8.8E-10 3E-14 62.6 7.9 28 20-47 3-35 (110)
383 2ghw_B Anti-SARS SCFV antibody 99.1 5.9E-10 2E-14 71.7 7.8 74 17-90 141-228 (247)
384 1eeq_A Kappa-4 immunoglobulin 99.1 6.8E-10 2.3E-14 63.6 7.3 32 17-48 7-44 (114)
385 2d9c_A Signal-regulatory prote 99.1 2.7E-09 9.2E-14 62.9 10.1 73 17-89 14-101 (136)
386 2or8_A Hepatitis A virus cellu 99.1 1.1E-09 3.9E-14 62.6 8.2 105 17-141 3-109 (116)
387 3kgr_A LAIR-1, hlair1, leukocy 99.1 1E-09 3.5E-14 62.2 7.7 76 6-87 7-85 (106)
388 2p1y_A Bispecific alpha/beta T 99.1 5.8E-10 2E-14 71.4 7.5 32 17-48 133-164 (238)
389 2yz1_A Tyrosine-protein phosph 99.1 1.5E-09 5.1E-14 62.6 8.6 32 17-48 13-45 (120)
390 3uzq_A Anti-dengue MAB 4E11; d 99.1 4.5E-10 1.6E-14 72.7 7.0 80 8-90 133-230 (253)
391 1p6f_A NKP46, natural cytotoxi 99.1 8E-10 2.7E-14 71.4 8.1 73 8-89 102-174 (242)
392 3ojm_B Fibroblast growth facto 99.1 1.3E-09 4.6E-14 69.0 9.1 73 18-90 125-208 (231)
393 1zox_A CLM-1; IG-superfamily, 99.1 8E-09 2.7E-13 58.9 11.5 101 17-141 7-108 (113)
394 3grw_A Fibroblast growth facto 99.1 1.5E-09 5E-14 69.4 9.0 75 17-91 120-206 (241)
395 1l6x_A Immunoglobulin gamma-1 99.1 1.1E-09 3.7E-14 68.9 8.3 112 24-136 16-146 (207)
396 3bn9_D E2 FAB heavy chain; ant 99.0 3.8E-09 1.3E-13 68.8 11.0 73 18-90 7-102 (257)
397 1fo0_B Protein (BM3.3 T cell r 99.0 2.4E-09 8.1E-14 61.2 8.8 32 17-48 7-38 (112)
398 1pew_A JTO2, A lambda-6 type i 99.0 1.1E-09 3.8E-14 62.2 7.4 31 18-48 7-39 (109)
399 2v5y_A Receptor-type tyrosine- 99.0 1.6E-08 5.6E-13 74.5 15.3 79 7-89 164-245 (731)
400 3gkz_A Anti-methamphetamine si 99.0 1.4E-09 4.9E-14 70.4 8.6 36 9-47 142-178 (257)
401 1dlf_L Anti-dansyl immunoglobu 99.0 1.9E-09 6.6E-14 61.6 8.2 32 17-48 7-43 (113)
402 2aw2_A B and T lymphocyte atte 99.0 1.6E-08 5.6E-13 56.0 11.2 36 17-52 17-53 (120)
403 1oga_E TRBC1, T-cell receptor 99.0 4.9E-09 1.7E-13 67.8 10.8 119 17-136 9-160 (252)
404 3sbw_C Programmed cell death 1 99.0 1.1E-09 3.7E-14 69.2 7.5 70 22-91 127-199 (222)
405 3juy_B 3B3 single chain varian 99.0 1.7E-09 5.8E-14 70.1 8.6 79 8-89 149-242 (256)
406 4frw_A Poliovirus receptor-rel 99.0 5.7E-10 2E-14 69.9 6.2 73 18-91 125-199 (218)
407 1u3h_A T-cell receptor alpha-c 98.6 2.6E-11 9E-16 69.2 0.0 32 17-48 5-36 (110)
408 3noi_A Natural cytotoxicity tr 99.0 1E-09 3.6E-14 63.4 6.6 32 17-48 13-48 (120)
409 1qok_A MFE-23 recombinant anti 99.0 1.5E-09 5.3E-14 71.4 8.1 31 17-48 168-198 (282)
410 1ypz_E T cell receptor delta, 99.0 9.6E-09 3.3E-13 64.8 11.4 72 17-89 7-93 (207)
411 1hzh_H IGG, immunoglobulin hea 99.0 9.6E-09 3.3E-13 71.7 12.5 73 18-90 7-102 (457)
412 1f3r_B FV antibody fragment; I 99.0 8.1E-10 2.8E-14 71.7 6.6 73 17-89 145-231 (257)
413 3esu_F Antibody 14B7* light ch 99.0 1E-09 3.5E-14 70.8 7.0 31 17-47 137-169 (250)
414 1tvd_A T cell receptor, ES204 99.0 3.4E-09 1.2E-13 60.8 8.5 32 17-48 6-38 (116)
415 2z35_A T-cell receptor alpha-c 99.0 4.2E-09 1.4E-13 60.1 8.4 32 17-48 6-37 (112)
416 3d9a_L Light chain of hyhel10 99.0 2.6E-10 8.8E-15 71.8 3.6 69 23-92 124-202 (213)
417 3u6r_L Antibody 1:7 (light cha 99.0 2.1E-08 7.1E-13 59.8 11.6 32 17-48 6-37 (143)
418 3auv_A SC-DSFV derived from th 99.0 2.8E-09 9.4E-14 69.9 8.5 72 18-89 141-235 (276)
419 4f80_A Butyrophilin subfamily 99.0 1.5E-09 5E-14 69.1 7.0 72 18-90 125-200 (226)
420 3iu4_H CHP3 FAB heavy chain; a 99.0 8.1E-09 2.8E-13 67.5 10.7 72 19-90 8-101 (263)
421 1nko_A Sialic acid binding IG- 99.0 3.9E-09 1.3E-13 61.9 8.4 32 17-48 12-50 (132)
422 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 4.9E-09 1.7E-13 68.0 9.6 37 7-47 136-172 (256)
423 1neu_A Myelin P0 protein; stru 99.0 2.4E-09 8.2E-14 61.9 7.3 108 17-141 5-117 (124)
424 1fo0_A Protein (BM3.3 T cell r 99.0 5.2E-09 1.8E-13 60.1 8.6 32 17-48 6-38 (116)
425 2or7_A T-cell immunoglobulin a 99.0 1.9E-09 6.5E-14 61.7 6.8 31 17-47 3-35 (115)
426 2gki_A Nuclease; anti-DNA anti 99.0 2.8E-09 9.5E-14 70.5 8.5 73 17-89 165-257 (291)
427 2edo_A CD48 antigen; beta-sand 99.0 4.6E-10 1.6E-14 65.1 4.1 32 17-48 10-42 (121)
428 3rrq_A Protein PD-1, programme 99.0 1.4E-08 4.7E-13 59.4 10.4 31 17-47 7-38 (129)
429 2q87_A CMRF35-H antigen; all-b 99.0 1.8E-09 6.2E-14 61.4 6.4 30 18-47 3-33 (110)
430 1he7_A High affinity nerve gro 99.0 9.1E-10 3.1E-14 64.2 5.1 62 79-141 17-97 (126)
431 2i24_N NEW antigen receptor PB 99.0 5.1E-09 1.7E-13 60.7 8.3 32 17-48 6-39 (121)
432 3u1s_H FAB PGT145 heavy chain; 99.0 3.7E-09 1.2E-13 69.2 8.5 69 19-87 31-122 (267)
433 3mj8_L Stimulatory hamster ant 99.0 4.1E-10 1.4E-14 70.9 3.8 80 7-90 113-200 (213)
434 3t0v_A Immunoglobulin variable 99.0 1.6E-08 5.3E-13 58.8 10.0 31 18-48 7-39 (123)
435 3nl4_L Antigen binding fragmen 99.0 4.1E-10 1.4E-14 70.9 3.5 32 22-54 125-157 (213)
436 2v5y_A Receptor-type tyrosine- 99.0 3.1E-09 1.1E-13 78.3 8.6 114 27-141 92-258 (731)
437 3ux9_B SCFV antibody; five hel 99.0 2.9E-09 9.9E-14 68.9 7.6 29 20-48 143-173 (256)
438 1oaq_L Light chain; antibody, 99.0 5.1E-09 1.8E-13 60.5 7.9 70 20-89 9-95 (120)
439 3bj9_1 Immunoglobulin IOTA cha 99.0 3.2E-08 1.1E-12 56.6 11.2 30 18-47 5-37 (116)
440 1lk3_L 9D7 light chain; antige 98.9 4.8E-10 1.6E-14 70.5 3.6 68 23-91 123-200 (210)
441 2pet_A Lutheran blood group gl 98.9 3.9E-09 1.3E-13 67.0 7.8 99 17-141 124-229 (231)
442 1nez_G T-cell surface glycopro 98.9 8E-09 2.8E-13 60.4 8.5 38 8-48 4-41 (128)
443 3mbe_C I-AG7; T cell receptor, 98.9 1.4E-07 4.7E-12 60.4 14.7 112 17-130 7-140 (229)
444 1nfd_E H57 FAB; complex (immun 98.9 1.1E-10 3.6E-15 73.6 0.3 69 22-91 124-200 (212)
445 1b6u_A KIR2DL3, P58 killer cel 98.9 2.4E-09 8.2E-14 69.8 6.7 64 22-89 117-182 (257)
446 1q0x_L FAB 9B1, light chain; a 98.9 7.9E-10 2.7E-14 69.5 4.3 67 23-90 127-202 (212)
447 2qhl_A Novel immune-type recep 98.9 1.9E-09 6.5E-14 61.4 5.4 32 17-48 5-37 (111)
448 2eys_A NKT15; natural killer T 98.9 2.2E-07 7.5E-12 58.8 15.4 114 17-131 9-147 (210)
449 1lp9_E T-cell receptor alpha c 98.9 4.4E-08 1.5E-12 61.2 12.1 111 17-128 7-142 (194)
450 2atp_B T-cell surface glycopro 98.9 6.7E-09 2.3E-13 59.5 7.7 31 17-47 4-35 (115)
451 3mj6_A Junctional adhesion mol 98.9 2.2E-09 7.6E-14 69.7 6.3 73 17-89 124-223 (268)
452 1moe_A Anti-CEA MAB T84.66; an 98.9 5.5E-09 1.9E-13 66.9 7.9 32 17-48 125-158 (240)
453 1p4b_L Antibody variable light 98.9 6.2E-09 2.1E-13 61.5 7.5 30 18-47 12-44 (135)
454 2xzc_L FAB A.17 light chain; i 98.9 1.3E-09 4.4E-14 68.8 4.7 66 24-90 127-202 (216)
455 2otu_A FV light chain variable 98.9 9E-09 3.1E-13 59.0 7.9 30 18-47 8-38 (115)
456 3kg5_A B-cell antigen receptor 98.9 1E-08 3.5E-13 60.5 8.1 72 17-89 24-102 (134)
457 1hxm_A Gamma-delta T-cell rece 98.9 5.5E-08 1.9E-12 62.3 12.1 73 17-89 7-97 (229)
458 2ckn_A Basic fibroblast growth 98.9 3.1E-09 1.1E-13 58.7 5.5 24 74-98 21-44 (95)
459 3bp6_A Programmed cell death p 98.9 2.7E-08 9.2E-13 57.2 9.3 32 17-48 5-37 (117)
460 2hp4_A T-cell surface glycopro 98.9 8E-09 2.7E-13 59.2 7.0 31 17-47 6-37 (114)
461 2zg1_A Sialic acid-binding IG- 98.9 5.8E-09 2E-13 65.5 7.0 61 23-89 135-199 (214)
462 2kkq_A Myotilin; unknown funct 98.9 2.2E-09 7.5E-14 61.7 4.5 66 75-141 28-107 (116)
463 1svz_A Immunoglobulin;, single 98.9 2.1E-08 7.2E-13 64.5 9.6 29 20-48 136-166 (247)
464 2lu7_A Obscurin-like protein 1 98.9 1.1E-08 3.9E-13 55.4 7.1 63 74-142 8-82 (84)
465 1q9r_B S25-2 FAB (IGG1K) heavy 98.9 2E-09 6.8E-14 68.3 4.5 72 23-131 139-212 (222)
466 1n4x_H Immunoglobulin heavy ch 98.9 1.4E-07 4.8E-12 54.3 12.0 31 18-48 7-39 (120)
467 3r8b_B G5-8, enterotoxin type 98.9 2.6E-08 9E-13 57.9 8.9 32 17-48 11-42 (125)
468 2c1o_A IGK-C protein; FAB frag 98.9 9.9E-10 3.4E-14 71.0 3.1 67 24-91 167-243 (254)
469 1dr9_A B7-1 (CD80), T lymphocy 98.9 1E-08 3.5E-13 63.9 7.5 66 24-91 119-189 (201)
470 3tv3_L PGT128 light chain, IG 98.9 8.7E-10 3E-14 69.3 2.6 45 7-55 110-156 (211)
471 1hng_A CD2; T lymphocyte adhes 98.9 5E-09 1.7E-13 64.4 6.0 56 24-90 108-163 (176)
472 2yc1_A Single chain antibody f 98.9 1.9E-08 6.4E-13 57.8 8.0 31 18-48 7-39 (117)
473 4esk_A LAIR-1, mlair1, leukocy 98.9 1.1E-08 3.8E-13 57.5 6.8 40 7-53 8-51 (102)
474 1j05_H T84.66 antibody, anti-C 98.9 2.8E-08 9.4E-13 57.4 8.6 31 18-48 7-39 (121)
475 1i1r_A GP130, interleukin-6 re 98.9 1.5E-07 5.3E-12 62.3 13.4 70 17-90 10-87 (303)
476 1yc7_A Anti-VSG immunoglobulin 98.9 1.3E-07 4.4E-12 54.9 11.4 31 18-48 7-39 (124)
477 2znx_A SCFV; fluorotryptohpan, 98.9 9.1E-09 3.1E-13 66.2 7.1 29 20-48 131-161 (242)
478 3b9v_A Heavy chain variable do 98.8 2.8E-07 9.5E-12 53.0 12.7 31 18-48 7-39 (120)
479 1mfa_H IGG1-lambda Se155-4 FAB 98.8 2.1E-07 7E-12 53.6 12.1 30 18-47 7-38 (120)
480 2bnu_A TCR alpha chain, T-cell 98.8 1.4E-07 4.8E-12 59.3 12.1 73 17-89 6-94 (203)
481 2xt1_B Camelid VHH 9; viral pr 98.8 2.6E-08 9E-13 57.6 8.1 31 18-48 9-41 (121)
482 1vca_A VCAM-D1,2, human vascul 98.8 3E-09 1E-13 66.8 4.4 68 21-89 101-176 (202)
483 1a2y_B IGG1-kappa D1.3 FV (hea 98.8 2.2E-08 7.7E-13 57.4 7.7 30 19-48 8-39 (116)
484 1ypz_F T-cell receptor gamma c 98.8 1.5E-08 5.2E-13 64.7 7.7 72 17-88 7-100 (230)
485 2eo9_A Roundabout homolog 1; b 98.8 2.4E-09 8.1E-14 61.5 3.5 65 76-141 22-96 (118)
486 1dqt_A CTLA4, cytotoxic T lymp 98.8 5.5E-08 1.9E-12 55.8 9.2 32 17-48 5-39 (117)
487 4ety_A LAIR-1, mlair1, leukocy 98.8 1.4E-08 4.7E-13 58.5 6.6 73 7-88 8-84 (118)
488 3rgv_A YAE62 TCR A chain; TCR, 98.8 1.7E-07 5.7E-12 58.9 12.0 110 17-130 6-139 (200)
489 1zvo_C Myeloma immunoglobulin 98.8 1.2E-07 4E-12 67.4 12.7 126 8-136 296-438 (512)
490 1kxv_C Camelid VHH domain CAB1 98.8 2.9E-08 1E-12 57.3 8.0 31 18-48 7-39 (121)
491 3qr2_A Basigin; CD147, EMMPRIN 98.8 4.9E-08 1.7E-12 57.4 9.1 57 75-131 34-115 (137)
492 3fku_X Neutralizing antibody F 98.8 2E-08 6.8E-13 66.0 8.1 73 17-90 146-234 (280)
493 3omz_A Human vdelta1 gamma del 98.8 1.8E-08 6E-13 65.4 7.8 37 8-47 136-173 (259)
494 1u9k_A Triggering receptor exp 98.8 6.3E-08 2.1E-12 55.3 9.1 104 17-141 5-113 (114)
495 3bqu_C 3H6 FAB light chain; be 98.8 1.5E-09 5E-14 69.3 2.3 66 24-90 147-222 (233)
496 2oi9_C V beta, T cell receptor 98.8 6.2E-08 2.1E-12 56.0 9.0 31 17-48 7-37 (121)
497 3qjh_A 5C.C7 alpha chain; immu 98.8 3.2E-07 1.1E-11 57.9 12.8 111 17-130 9-141 (205)
498 3dmm_D T-cell surface glycopro 98.8 3.2E-08 1.1E-12 59.4 8.0 32 17-48 7-39 (150)
499 1hkf_A NKP44, NK cell activati 98.8 9.2E-08 3.2E-12 55.4 9.7 101 17-141 16-121 (122)
500 3bp6_B Programmed cell death 1 98.8 5.5E-09 1.9E-13 65.2 4.8 65 22-91 114-181 (202)
No 1
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.89 E-value=2e-22 Score=127.87 Aligned_cols=133 Identities=23% Similarity=0.388 Sum_probs=101.7
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee--ccceEEEeecC-CCCCeE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH--YGEQLNITKIS-RTEMGA 81 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--~~~~l~i~~v~-~~d~G~ 81 (142)
+..||.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+........... .+..|.|.+++ ..|+|.
T Consensus 3 ~~~~P~~~~---~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~ 78 (212)
T 2yd6_A 3 GETPPRFTR---TPVDQTGVSGGVASFICQATGDPRPKIVWNK-KGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAI 78 (212)
T ss_dssp -CEEEEEEE---CCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEE
T ss_pred CCCCCeEEe---CcceeEEecCCeEEEEEEEeeCCCCEEEEEE-CCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeE
Confidence 457899988 7888899999999999999998989999999 8877754432222222 23469999995 999999
Q ss_pred EEEEEEec-------------------------------------------------CCccEEEEEEEec----------
Q psy15390 82 YLCIATKI-------------------------------------------------GPLKIFWEIIFHM---------- 102 (142)
Q Consensus 82 y~C~~~~~-------------------------------------------------~~~~~~w~~~~~~---------- 102 (142)
|+|.+.|. +.+.+.|.+....
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~ 158 (212)
T 2yd6_A 79 YECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRI 158 (212)
T ss_dssp EEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCE
T ss_pred EEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceE
Confidence 99998764 3357788642110
Q ss_pred -----cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 103 -----HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 103 -----~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.....|.|..++.+|+|.|+|.|.|..|...+..+.|.|
T Consensus 159 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~ 202 (212)
T 2yd6_A 159 KQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYV 202 (212)
T ss_dssp EEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEE
Confidence 123678999999999999999999999986666676655
No 2
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.89 E-value=1.7e-22 Score=125.99 Aligned_cols=133 Identities=24% Similarity=0.405 Sum_probs=101.3
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+............+..|.|.+++..|+|.|.|
T Consensus 4 ~~~~P~i~~---~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (192)
T 2iep_A 4 LPKAPVITT---PLETVDALVEEVATFMCAVESYPQPEISWTR-NKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCC 79 (192)
T ss_dssp CCEEEEESS---CCCEEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEE
T ss_pred cCCCceeec---CccceeeeCCCcEEEEeeCCCCCCCeEEEEE-CCEEccccCccEEEcCCccEEEEcCCCcccCeEEEE
Confidence 345677766 6778889999999999999998888999999 777765432222223344579999999999999999
Q ss_pred EEEec-------------------------------------------CCccEEEEEEE---------eccccceEEEcc
Q psy15390 85 IATKI-------------------------------------------GPLKIFWEIIF---------HMHYGEQLNITK 112 (142)
Q Consensus 85 ~~~~~-------------------------------------------~~~~~~w~~~~---------~~~~~~~l~i~~ 112 (142)
.+.+. +.+.+.|.+.. .....+.|.|..
T Consensus 80 ~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~ 159 (192)
T 2iep_A 80 TANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHN 159 (192)
T ss_dssp EEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESS
T ss_pred EEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEec
Confidence 99864 33567886421 122345799999
Q ss_pred CCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 113 ISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 113 ~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
++.+|+|.|+|.|.|..|...+..+.|.|
T Consensus 160 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 188 (192)
T 2iep_A 160 VQKEDAGQYRCVAKNSLGTAYSKLVKLEV 188 (192)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CChhhCEEEEEEEEcCCCcEEEEEEEEEE
Confidence 99999999999999999875566677766
No 3
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.89 E-value=8.1e-22 Score=122.56 Aligned_cols=129 Identities=20% Similarity=0.342 Sum_probs=96.6
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
+|.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+......+.....++.|.|.+++..|+|.|.|.+.
T Consensus 2 ~~~~~~---~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 77 (189)
T 2v5t_A 2 MLTFRE---VVSPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGR 77 (189)
T ss_dssp CCEEEE---CCSSEEEETTSCEEECCEEECSSCCEEEEEC------CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEE
T ss_pred Cceeec---cCCCEEEeCCCcEEEEEEEcCCCCCEEEEEE-CCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEE
Confidence 577777 7778899999999999999998888999999 776665444444455566789999999999999999987
Q ss_pred ec----------------------------------------------CCccEEEEEEEe----------ccccceEEEc
Q psy15390 88 KI----------------------------------------------GPLKIFWEIIFH----------MHYGEQLNIT 111 (142)
Q Consensus 88 ~~----------------------------------------------~~~~~~w~~~~~----------~~~~~~l~i~ 111 (142)
+. +.+.+.|.+... ......|.|.
T Consensus 78 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~ 157 (189)
T 2v5t_A 78 VEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVR 157 (189)
T ss_dssp ETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEEC
T ss_pred EcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEc
Confidence 54 335677864211 1224579999
Q ss_pred cCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 112 KISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 112 ~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.+..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 158 ~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 186 (189)
T 2v5t_A 158 NIINSDGGPYVCRATNKAGE-DEKQAFLQV 186 (189)
T ss_dssp SCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred CCChhhCeeEEEEEEeCCCc-eeEEEEEEE
Confidence 99999999999999999886 445555544
No 4
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.89 E-value=4.5e-22 Score=124.25 Aligned_cols=131 Identities=24% Similarity=0.269 Sum_probs=101.6
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC--cceEEeec-cceEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK--RKKVHMHY-GEQLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~-~~~l~i~~v~~~d~G~y~ 83 (142)
.+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+.... ..+..... ...|.|.+++..|+|.|.
T Consensus 4 ~~P~~~~---~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 79 (194)
T 2a38_A 4 QAPTFTQ---PLQSVVVLEGSTATFEAHISGFPVPEVSWFR-DGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYS 79 (194)
T ss_dssp EEEEEEE---CCCCEEEETTSCEEEEEEEEEESCCEEEEEE-SSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCCeEEc---cCCceEEECCCEEEEEEEEEecCCCEEEEEE-CCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEE
Confidence 4788887 7788899999999999999998888999999 887776543 22322222 347999999999999999
Q ss_pred EEEEec---------------------------------------------CCccEEEEEEEec------------cccc
Q psy15390 84 CIATKI---------------------------------------------GPLKIFWEIIFHM------------HYGE 106 (142)
Q Consensus 84 C~~~~~---------------------------------------------~~~~~~w~~~~~~------------~~~~ 106 (142)
|.+.+. +.+.+.|.+.... ....
T Consensus 80 C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 159 (194)
T 2a38_A 80 LKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLY 159 (194)
T ss_dssp EEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEE
T ss_pred EEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEE
Confidence 999754 3456778642111 1112
Q ss_pred eEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 107 QLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 107 ~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.|.|..++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 160 ~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 194 (194)
T 2a38_A 160 SLLIAEAYPEDSGTYSVNATNSVGR-ATSTAELLVQ 194 (194)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEE-EEEEEEEEEC
T ss_pred EEEECCCChhcCeEEEEEEEeCCCc-eEEEEEEEEC
Confidence 6889999999999999999999986 6788888886
No 5
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.89 E-value=4.6e-22 Score=123.94 Aligned_cols=131 Identities=25% Similarity=0.459 Sum_probs=100.6
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
||.+..+. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+....+.. ....+..|.|.+++..|+|.|.|.+.
T Consensus 2 pP~i~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~ 78 (192)
T 2va4_A 2 MPAISMPQ-KSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEENEKYI-LKGSNTELTVRNIINSDGGPYVCRAT 78 (192)
T ss_dssp CCEEECSC-CEEEEETTSCCCEEEECEEECSSCCEEEEEE-TTEECCCSSSEE-EETTTTEEEECSCCGGGCEEEEEEEE
T ss_pred CCcccCCC-CCcEEEEecCCCEEEEEeeccCCCCeEEEEE-CCeEcCCCccEE-EeCCeeEEEEecCChhcCcEEEEEEE
Confidence 67776531 3345778899999999999988888999999 888776543322 22334579999999999999999987
Q ss_pred ec-----------------------------------------CCccEEEEEE---Eec----------------cccce
Q psy15390 88 KI-----------------------------------------GPLKIFWEII---FHM----------------HYGEQ 107 (142)
Q Consensus 88 ~~-----------------------------------------~~~~~~w~~~---~~~----------------~~~~~ 107 (142)
+. +.+.+.|.+. ... .....
T Consensus 79 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (192)
T 2va4_A 79 NKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS 158 (192)
T ss_dssp ETTEEEEEEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE
T ss_pred ccccccceEEEEEEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE
Confidence 64 3457888653 000 11257
Q ss_pred EEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 108 LNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 108 l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
|.|.++..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 192 (192)
T 2va4_A 159 LHIKDVKLSDSGRYDCEAASRIGG-HQKSMYLDIE 192 (192)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCE-EEEEEEEEEC
T ss_pred EEEecCCcccCEEEEEEEEecCCc-eEEEEEEEeC
Confidence 899999999999999999999996 7888889886
No 6
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.89 E-value=1.9e-21 Score=121.80 Aligned_cols=131 Identities=25% Similarity=0.398 Sum_probs=101.9
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC-cceEEeeccc--eEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK-RKKVHMHYGE--QLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~--~l~i~~v~~~d~G~y~ 83 (142)
.+|.|.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+.... +.+.....++ .|.|.+++..|+|.|.
T Consensus 3 ~~P~~~~---~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 78 (197)
T 2j8h_A 3 MAPHFKE---ELRNLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQ 78 (197)
T ss_dssp CCCEEEE---CCCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEE
T ss_pred CCCEEEE---cCCccEEcCCCEEEEEEEEeecCCCEEEEEE-CCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEE
Confidence 5788887 7788899999999999999999889999999 777765432 2232222333 7999999999999999
Q ss_pred EEEEec-----------------------------------------------CCccEEEEEEEe------------ccc
Q psy15390 84 CIATKI-----------------------------------------------GPLKIFWEIIFH------------MHY 104 (142)
Q Consensus 84 C~~~~~-----------------------------------------------~~~~~~w~~~~~------------~~~ 104 (142)
|.+.|. +.+.+.|.+... ...
T Consensus 79 C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~ 158 (197)
T 2j8h_A 79 VRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRS 158 (197)
T ss_dssp EEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSS
T ss_pred EEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCC
Confidence 998764 345788865211 112
Q ss_pred cceEEEcc-CCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 105 GEQLNITK-ISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 105 ~~~l~i~~-~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
...|.|.. +..+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 159 ~~~L~i~~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 196 (197)
T 2j8h_A 159 FTSLVFPNGVERKDAGFYVVCAKNRFGI-DQKTVELDVA 196 (197)
T ss_dssp EEEEECTTCCCGGGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred ceEEEEeCCCCcccCEeEEEEEEeCCCc-EeEEEEEEEe
Confidence 35788888 9999999999999999986 6888888773
No 7
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.89 E-value=8.6e-22 Score=124.90 Aligned_cols=133 Identities=26% Similarity=0.433 Sum_probs=100.8
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceec-CCcceEEeecc--ceEEEeecCC-CCCeE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI-NKRKKVHMHYG--EQLNITKISR-TEMGA 81 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~--~~l~i~~v~~-~d~G~ 81 (142)
..||.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+.. ..+.......+ ..|.|.++.. .|+|.
T Consensus 4 ~~pP~~~~---~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~ 79 (212)
T 2yd1_A 4 AHPPEIIR---KPQNQGVRVGGVASFYCAARGDPPPSIVWRK-NGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAP 79 (212)
T ss_dssp -CCCEEEE---CCCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSE
T ss_pred CCCCEEEc---CCCceEEecCCEEEEEEEEccCCCCeEEEEE-CCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCce
Confidence 46899888 7888899999999999999999989999999 8877752 22222222223 4799999999 99999
Q ss_pred EEEEEEec--------------------------------------------------CCccEEEEEEEec---------
Q psy15390 82 YLCIATKI--------------------------------------------------GPLKIFWEIIFHM--------- 102 (142)
Q Consensus 82 y~C~~~~~--------------------------------------------------~~~~~~w~~~~~~--------- 102 (142)
|+|.+.|. +.+.+.|.+....
T Consensus 80 Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~ 159 (212)
T 2yd1_A 80 YECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYS 159 (212)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEE
T ss_pred EEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEE
Confidence 99998763 2246777653111
Q ss_pred cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 103 HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 103 ~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
...+.|.|.+++.+|+|.|+|.|.|..|...+..+.|.|+
T Consensus 160 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~ 199 (212)
T 2yd1_A 160 LKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199 (212)
T ss_dssp EETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEE
Confidence 1245799999999999999999999999754445677663
No 8
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.89 E-value=1.1e-21 Score=122.79 Aligned_cols=128 Identities=20% Similarity=0.352 Sum_probs=99.6
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEe-cCCCCeeEEEecCCcceecCCc--ceEEeec--------cceEEEeecCC
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKR--KKVHMHY--------GEQLNITKISR 76 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~--~~~~~~~--------~~~l~i~~v~~ 76 (142)
+|.|.. .+....+.+|+++.|.|.+. +.|.+.+.|++ ++..+..... .++.... .+.|.|.+++.
T Consensus 2 ~~~~~~---~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 77 (195)
T 2c5d_C 2 ESPFVG---NPGNITGARGLTGTLRCQLQVQGEPPEVHWLR-DGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQL 77 (195)
T ss_dssp CCSEEE---CCCCEEECTTCCEEEEEEEEEESSCCCCEEEE-TTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCS
T ss_pred CCeecc---ChhheEEecCCcEEEecccccCCCCcEEEEEE-CCEEcccCCCCceEEEEccccccceeeccEEEEEeccc
Confidence 577877 78889999999999999999 88888999999 8888765532 2222222 35799999999
Q ss_pred CCCeEEEEEEEec-------------------------------------------CCc-cEEEEEEEecc-------cc
Q psy15390 77 TEMGAYLCIATKI-------------------------------------------GPL-KIFWEIIFHMH-------YG 105 (142)
Q Consensus 77 ~d~G~y~C~~~~~-------------------------------------------~~~-~~~w~~~~~~~-------~~ 105 (142)
.|+|.|.|.+.+. +.+ .+.|.+..... ..
T Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~ 157 (195)
T 2c5d_C 78 SDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQ 157 (195)
T ss_dssp TTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSCC
T ss_pred cCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCCC
Confidence 9999999998864 335 78887643221 45
Q ss_pred ceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 106 EQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 106 ~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
..|.|.+++ |+|.|+|.|.|..|...+..+.|.|
T Consensus 158 ~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 158 RSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 678888877 8999999999999875457777776
No 9
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.89 E-value=5.8e-22 Score=122.75 Aligned_cols=129 Identities=21% Similarity=0.350 Sum_probs=96.0
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec---cceEEEeecCCCCCeEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY---GEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~---~~~l~i~~v~~~d~G~y~C 84 (142)
+|.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+............ .+.|.|.+++..|+|.|.|
T Consensus 2 ~~~~~~---~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 77 (182)
T 1rhf_A 2 GLKLMG---APVKLTVSQGQPVKLNCSVEGMEEPDIQWVK-DGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWC 77 (182)
T ss_dssp -----C---CCEEEEEETTCCEEEEEEEESCSSCCEEEEE-TTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEE
T ss_pred CCEEEe---CCcceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEE
Confidence 455665 6778889999999999999998888999999 88877655333332222 2579999999999999999
Q ss_pred EEEec-------------------------------------------CCc-cEEEEEEEecc-----ccceEEEccCCC
Q psy15390 85 IATKI-------------------------------------------GPL-KIFWEIIFHMH-----YGEQLNITKISR 115 (142)
Q Consensus 85 ~~~~~-------------------------------------------~~~-~~~w~~~~~~~-----~~~~l~i~~~~~ 115 (142)
.+.+. +.+ .+.|.+..... ....|.|.++
T Consensus 78 ~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~-- 155 (182)
T 1rhf_A 78 QVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGV-- 155 (182)
T ss_dssp EESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECCC--
T ss_pred EEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCCCceEEEEecc--
Confidence 98754 234 78887532221 3556788777
Q ss_pred CCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 116 TEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 116 ~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
+|+|.|+|.|.|..|...+..+.|.|+
T Consensus 156 ~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 156 TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 589999999999999755678888886
No 10
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.88 E-value=1.3e-21 Score=122.22 Aligned_cols=133 Identities=22% Similarity=0.333 Sum_probs=101.8
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAY 82 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y 82 (142)
.+..+|.+.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+....+....... ...|.|.+++..|+|.|
T Consensus 3 ~~~~~P~~~~---~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 78 (197)
T 3lcy_A 3 MSGEAPGIRK---EMKDVTTKLGEAAQLSCQIVGRPLPDIKWYR-FGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVY 78 (197)
T ss_dssp CCCEEEEEEE---CCCCEEEETTSEEEEEEEEEEESCCEEEEEE-TTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEE
T ss_pred ccCCCCcccc---cCCceEEeCCCcEEEEEEEecCCCCEEEEEE-CCEECCCCccEEEEeCCCEEEEEEecCCccCCEEE
Confidence 4556888888 7888899999999999999998888999999 88777554433322211 12799999999999999
Q ss_pred EEEEEec---------------------------------------------CCccEEEEEEEe------------cccc
Q psy15390 83 LCIATKI---------------------------------------------GPLKIFWEIIFH------------MHYG 105 (142)
Q Consensus 83 ~C~~~~~---------------------------------------------~~~~~~w~~~~~------------~~~~ 105 (142)
+|.+.+. +.+.+.|.+... ....
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 158 (197)
T 3lcy_A 79 TCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHY 158 (197)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSE
T ss_pred EEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCE
Confidence 9998864 345788864211 1112
Q ss_pred ceEEEccCCC-CCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 106 EQLNITKISR-TEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 106 ~~l~i~~~~~-~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
..|.|..+.. +|+|.|+|.|.|..|. .+..+.|.|
T Consensus 159 ~~L~i~~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 194 (197)
T 3lcy_A 159 THLVMKNVQRKTHAGKYKVQLSNVFGT-VDAILDVEI 194 (197)
T ss_dssp EEEEESSCCHHHHCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred EEEEEccccchhhCceEEEEEEcCcCc-eEEEEEEEE
Confidence 5688989985 8999999999999986 677777776
No 11
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.87 E-value=2.5e-21 Score=119.56 Aligned_cols=124 Identities=18% Similarity=0.280 Sum_probs=97.2
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCe-eEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPE-IKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
..+|.+.. .+....+.+|++++|.|.+.+.+.+. +.|++ ++..+. ..+..|.|.+++..|+|.|.|
T Consensus 5 ~~~p~i~~---~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~-~~~~~~---------~~~~~L~i~~~~~~d~G~Y~C 71 (175)
T 1fnl_A 5 LPKAVVFL---EPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFH-NESLIS---------SQASSYFIDAATVNDSGEYRC 71 (175)
T ss_dssp CCCCEEEE---ESCCSEEETTCCEEEEEECCCBTTBCCCEEEE-TTEEEE---------SSCSEEEESSCCGGGCEEEEE
T ss_pred CCCCEEEE---cCCceeeeCCCcEEEEeeCCCCCCCcceEEEE-CCEEcc---------CCceEEEEeCCCcccCEEEEE
Confidence 45677776 67777899999999999998877665 78999 777653 235689999999999999999
Q ss_pred EEEec----------------------------------------CCccEEEEEEE----eccccceEEEccCCCCCCeE
Q psy15390 85 IATKI----------------------------------------GPLKIFWEIIF----HMHYGEQLNITKISRTEMGA 120 (142)
Q Consensus 85 ~~~~~----------------------------------------~~~~~~w~~~~----~~~~~~~l~i~~~~~~d~g~ 120 (142)
.+.+. +.+.+.|.+.. .......|.|.+++.+|+|.
T Consensus 72 ~~~n~~~s~~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~G~ 151 (175)
T 1fnl_A 72 QTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGS 151 (175)
T ss_dssp ECSSSCCCCCEEEEEECSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEE
T ss_pred EeeCCcccccEEEEEeCCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChhhCeE
Confidence 98753 12378887531 12245679999999999999
Q ss_pred EEEEEecCCCCCeeeEEEEEEC
Q psy15390 121 YLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 121 y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
|+|.|.|..+...+..+.|.|.
T Consensus 152 Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 152 YFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp EEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEEcCCCCccCccEEEEEe
Confidence 9999999877667777887773
No 12
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.87 E-value=3.3e-20 Score=122.00 Aligned_cols=131 Identities=24% Similarity=0.400 Sum_probs=102.9
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y~C 84 (142)
..||.|.. .+....+.+|+.++|.|.+.+.|.+.+.|++ ++..+....+.+..... ...|.|.+++..|+|.|.|
T Consensus 3 ~~pP~~~~---~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 78 (284)
T 2rik_A 3 MAPPFFDL---KPVSVDLALGESGTFKCHVTGTAPIKITWAK-DNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTC 78 (284)
T ss_dssp CCCCEEEE---CCCCEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCEEEc---cccceEecCCCcEEEEEEEEcCCCCEEEEEE-CCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEE
Confidence 46888888 7888899999999999999998888999999 88877655444433333 3579999999999999999
Q ss_pred EEEec-------------------------------------------CCccEEEEEEE------------eccccceEE
Q psy15390 85 IATKI-------------------------------------------GPLKIFWEIIF------------HMHYGEQLN 109 (142)
Q Consensus 85 ~~~~~-------------------------------------------~~~~~~w~~~~------------~~~~~~~l~ 109 (142)
.+.|. +.+.+.|.+.. .......|.
T Consensus 79 ~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~ 158 (284)
T 2rik_A 79 YASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLE 158 (284)
T ss_dssp EEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEE
T ss_pred EEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEE
Confidence 99764 33577886421 112235689
Q ss_pred EccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 110 ITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 110 i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 159 i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 189 (284)
T 2rik_A 159 MYNLSVEDSGDYTCEAHNAAGS-ASSSTSLKV 189 (284)
T ss_dssp ECSCCGGGCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred ECCCCcccCEEEEEEEEcCCCc-eeEEEEEEE
Confidence 9999999999999999999885 566666665
No 13
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.87 E-value=3.9e-21 Score=126.77 Aligned_cols=132 Identities=18% Similarity=0.339 Sum_probs=103.2
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......+.....++.|.|.+++..|+|.|+|
T Consensus 97 v~~~~~~~~---~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 172 (291)
T 1qz1_A 97 IFQKLMFKN---APTPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRC 172 (291)
T ss_dssp EECCSEEEE---CCSSEEEETTSCEEECCEEECSSCCEEEEEE-TTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEE
T ss_pred eeccccccC---CCCcccccCCCeEEEEEEeccCCCCEEEEEE-CCEEcccCCCceEEEccCCcEEEccCccccCeEEEE
Confidence 345677766 6677788999999999999999989999999 777765444444445566789999999999999999
Q ss_pred EEEec----------------------------------------------CCccEEEEEEEec--------------cc
Q psy15390 85 IATKI----------------------------------------------GPLKIFWEIIFHM--------------HY 104 (142)
Q Consensus 85 ~~~~~----------------------------------------------~~~~~~w~~~~~~--------------~~ 104 (142)
.+.|. +.+.+.|.+.... ..
T Consensus 173 ~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~ 252 (291)
T 1qz1_A 173 EGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDD 252 (291)
T ss_dssp EEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTT
T ss_pred EEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCC
Confidence 98863 3457888652111 12
Q ss_pred cceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 105 GEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 105 ~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 253 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V 288 (291)
T 1qz1_A 253 SSELTIRNVDKNDEAEYVCIAENKAGE-QDASIHLKV 288 (291)
T ss_dssp SCEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred CcEEEEEecChhcCEEEEEEEEeCCCc-eEEEEEEEE
Confidence 357999999999999999999999986 677777776
No 14
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.87 E-value=6.9e-22 Score=124.06 Aligned_cols=130 Identities=13% Similarity=0.248 Sum_probs=92.6
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+|.+.. .+.. .+.+|++++|.|.+.+ +.+.+.|++ ++..+...............|.|.+++..|+|.|+|.+
T Consensus 4 ~~P~i~~---~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 3p2t_A 4 PKPTLWA---EPGS-VISWGNSVTIWCQGTL-EAREYRLDK-EESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYY 77 (196)
T ss_dssp CCCEEEE---ESCS-EEETTCCEEEEEECCT-TCCEEEEEE-TTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEc---cCCC-cCCCCCcEEEEeeCCC-CCCEEEEEE-CCCCCcccccccccCCceEEEEeccCCcccCceEEEEE
Confidence 4677776 5555 7889999999999887 667899999 77765432111111123467999999999999999998
Q ss_pred EecC---------------------------------------------CccEEEEEEEe-------------ccccceE
Q psy15390 87 TKIG---------------------------------------------PLKIFWEIIFH-------------MHYGEQL 108 (142)
Q Consensus 87 ~~~~---------------------------------------------~~~~~w~~~~~-------------~~~~~~l 108 (142)
.|.. ++.+.|.+... ......|
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L 157 (196)
T 3p2t_A 78 RSPVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSPMDTFLLCKERAAHPLLCLRSEHGAQQHQAEF 157 (196)
T ss_dssp EETTEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEEEEEEEEEEETTCCCGGGSEEEEEEEEEEEEEE
T ss_pred eCCCcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCCCCCEEEEEeCCCcccceeecccccccCcceEE
Confidence 7641 12344543211 1124569
Q ss_pred EEccCCCCCCeEEEEEEecCCC----CCeeeEEEEEEC
Q psy15390 109 NITKISRTEMGAYLCIATNNVP----PSVSKRITVDVE 142 (142)
Q Consensus 109 ~i~~~~~~d~g~y~C~a~n~~~----~~~s~~~~l~V~ 142 (142)
.|.+++.+|+|.|+|.|.|..+ ...|..+.|.|.
T Consensus 158 ~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 158 PMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp EECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred EeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 9999999999999999999876 346777888874
No 15
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.87 E-value=2.2e-20 Score=116.50 Aligned_cols=126 Identities=20% Similarity=0.369 Sum_probs=94.2
Q ss_pred CCCeeeecCCCCceeEEec-CCcEEEEEEEecCCC--CeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTESTPSSVAVRE-EFNITLTCKAEGFPA--PEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~-g~~v~l~C~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
.||.+.. .+ ...+.+ |+++.|.|.+.+.+. +.+.|++ ++..+..... ...+..|.|.+++..|+|.|.
T Consensus 2 ~~P~i~~---~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~-~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~ 72 (190)
T 2wv3_A 2 NEPRIVT---SE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTK-NGVELTATRK----NASNMEYRINKPRAEDSGEYH 72 (190)
T ss_dssp -CCEEEE---CC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEE-TTEECTTCCB----CCSEEEEEESSCCGGGCEEEE
T ss_pred CCCcccc---cc-eEEEccCCceEEEEEEeccCCCCceEEEEEE-CCEECcccce----EeccEEEEEecCCcccCEEEE
Confidence 4778776 33 445556 999999999998876 6899999 8877654321 124567999999999999999
Q ss_pred EEEEec-----------------------------------------CCccEEEEEEE-----ec------------ccc
Q psy15390 84 CIATKI-----------------------------------------GPLKIFWEIIF-----HM------------HYG 105 (142)
Q Consensus 84 C~~~~~-----------------------------------------~~~~~~w~~~~-----~~------------~~~ 105 (142)
|.+.|. +.+.+.|.+.. .. ...
T Consensus 73 C~~~n~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~ 152 (190)
T 2wv3_A 73 CVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENY 152 (190)
T ss_dssp EEEEETTEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSE
T ss_pred EEEEeCCcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCe
Confidence 999763 34678887631 00 011
Q ss_pred ceEEEccCC-CCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 106 EQLNITKIS-RTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 106 ~~l~i~~~~-~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
..|.|.+++ .+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 153 ~~L~i~~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 189 (190)
T 2wv3_A 153 TELNIVNLQITEDPGEYECNATNSIGS-ASVSTVLRVR 189 (190)
T ss_dssp EEEEECSCCTTTSCEEEEEEEECSSCE-EEEEEEEEEE
T ss_pred eEEEEEeccccCCCEEEEEEEEecCCc-ceeEEEEEEE
Confidence 369999999 79999999999999986 6777777663
No 16
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.86 E-value=4.8e-21 Score=121.20 Aligned_cols=122 Identities=18% Similarity=0.279 Sum_probs=94.6
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCe-eEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPE-IKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
.+|.+.. .+....+.+|+++.|.|.+.+.+.+. +.|++ ++..+... ...|.|.+++..|+|.|+|.
T Consensus 6 p~p~i~~---~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k-~g~~l~~~---------~~~L~i~~v~~~D~G~Y~C~ 72 (204)
T 3sgj_C 6 PKAVVFL---EPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFH-NESLISSQ---------ASSYFIDAATVDDSGEYRCQ 72 (204)
T ss_dssp CBCEEEE---ESCCSEEETTCCEEEEEECCSSSSCCCEEEEE-TTEEESCC---------SSEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEE---cCCCeEEECCCCEEEEEcCCCCCCCcEEEEEE-CCEEcccC---------ccEEEEecccccCCEEEEEE
Confidence 3566655 56667899999999999999887665 99999 88765432 26899999999999999999
Q ss_pred EEec----------------------------------------CCccEEEEEEE----eccccceEEEccCCCCCCeEE
Q psy15390 86 ATKI----------------------------------------GPLKIFWEIIF----HMHYGEQLNITKISRTEMGAY 121 (142)
Q Consensus 86 ~~~~----------------------------------------~~~~~~w~~~~----~~~~~~~l~i~~~~~~d~g~y 121 (142)
+.|. +.+.+.|.+.. .......|.|.+++.+|+|.|
T Consensus 73 a~n~~~s~~~~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~G~Y 152 (204)
T 3sgj_C 73 TQLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSY 152 (204)
T ss_dssp ETTSBCCCCEEEEEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEE
T ss_pred eCCCcccccEEEEEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcccCEEE
Confidence 8754 22568886521 223456799999999999999
Q ss_pred EEEEecCCCCCeeeEEEEEE
Q psy15390 122 LCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 122 ~C~a~n~~~~~~s~~~~l~V 141 (142)
+|.|.|..+...+..+.|.|
T Consensus 153 ~C~a~n~~~~~~s~~~~l~V 172 (204)
T 3sgj_C 153 FCRGLVGSKNVSSETVQITI 172 (204)
T ss_dssp EEEEEETTEEEECCCEEEEE
T ss_pred EEEEEeCCCceecCcEEEEE
Confidence 99999965555677777776
No 17
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.86 E-value=7.2e-21 Score=119.20 Aligned_cols=124 Identities=22% Similarity=0.393 Sum_probs=96.0
Q ss_pred CCceeEEecCCcEEEEEE-EecCCC-CeeEEEecCCcceecC-CcceEEeeccceEEEeecCCCCCeEEEEEEEec----
Q psy15390 17 TPSSVAVREEFNITLTCK-AEGFPA-PEIKWRREDNQPISIN-KRKKVHMHYGEQLNITKISRTEMGAYLCIATKI---- 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~-~~~~~~-~~~~w~~~~~~~~~~~-~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~---- 89 (142)
.+..+.+.+|+.+.|.|. +.+.|. +.+.|++ ++..+... ...+.....++.|.|.+++..|+|.|+|.+.+.
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 92 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLL-NEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK 92 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEE-SSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEE-CCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCc
Confidence 567788999999999999 778887 8999999 77666432 223333445678999999999999999999863
Q ss_pred ------------------------------------------------CCccEEEEEEE--------eccccceEEEccC
Q psy15390 90 ------------------------------------------------GPLKIFWEIIF--------HMHYGEQLNITKI 113 (142)
Q Consensus 90 ------------------------------------------------~~~~~~w~~~~--------~~~~~~~l~i~~~ 113 (142)
+.+.+.|.+.. .......|.|.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v 172 (201)
T 3s97_C 93 SVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI 172 (201)
T ss_dssp EEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSC
T ss_pred chhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccC
Confidence 23567776421 1123568999999
Q ss_pred CCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 114 SRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 114 ~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 173 ~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 200 (201)
T 3s97_C 173 QLEDEGIYECEAENIRGK-DKHQARIYVQ 200 (201)
T ss_dssp CGGGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred ChhhCEEEEEEEEecCCc-eeeeEEEEEe
Confidence 999999999999999986 6778888774
No 18
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.86 E-value=1.6e-20 Score=119.21 Aligned_cols=132 Identities=28% Similarity=0.499 Sum_probs=98.4
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC--cceEEeeccce---EEEeecCCCCCe
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK--RKKVHMHYGEQ---LNITKISRTEMG 80 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~~~~---l~i~~v~~~d~G 80 (142)
..+|.+.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+.... ..+.....+.. +.|.+++..|+|
T Consensus 7 ~~~P~i~~---~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 82 (217)
T 2vr9_A 7 YQSPRIIE---HPTDLVVKKNEPATLNCKVEGKPEPTIEWFK-DGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGG 82 (217)
T ss_dssp CCCCEEEE---CCCCEEECTTSCEEECCEEECSSCCEEEEEE-TTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCE
T ss_pred cCCCEEec---CCCceEEeCCCcEEEEEEcCCCCCCeEEEEE-CCcCccCCCccceeEEecCCceEEEEEeccCCcccCc
Confidence 46888888 7788899999999999999998888999999 887775432 22322222222 268889999999
Q ss_pred EEEEEEEec---------------------------------------------CCccEEEEEEEe--------------
Q psy15390 81 AYLCIATKI---------------------------------------------GPLKIFWEIIFH-------------- 101 (142)
Q Consensus 81 ~y~C~~~~~---------------------------------------------~~~~~~w~~~~~-------------- 101 (142)
.|+|.+.|. +.+.+.|.+...
T Consensus 83 ~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~ 162 (217)
T 2vr9_A 83 EYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASS 162 (217)
T ss_dssp EEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCC
T ss_pred eEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCC
Confidence 999999864 335788875211
Q ss_pred ---ccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 102 ---MHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 102 ---~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....+.|.|.+++.+|+|.|+|.|.|..|...+....|.+
T Consensus 163 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 163 RVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp SEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 1134579999999999999999999999875444455443
No 19
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=8.7e-20 Score=119.99 Aligned_cols=135 Identities=19% Similarity=0.397 Sum_probs=102.3
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee-ccceEEEeecCCCCCeEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH-YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~l~i~~v~~~d~G~y 82 (142)
.+..+|.+... ......+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......+.... ....|.|.+++..|+|.|
T Consensus 94 ~V~~~p~~~~~--~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 170 (284)
T 2rik_A 94 GVQEPPRFIKK--LEPSRIVKQDEHTRYECKIGGSPEIKVLWYK-DETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDY 170 (284)
T ss_dssp EEECCCEEEEC--CCSEEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred EccCCCccccc--CCCceEecCCceEEEEEEEeeeCCCEEEEEE-CCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEE
Confidence 34557777652 3345568899999999999999999999999 8877765544333322 235799999999999999
Q ss_pred EEEEEec------------------------------------------CCccEEEEEEEe------------ccccceE
Q psy15390 83 LCIATKI------------------------------------------GPLKIFWEIIFH------------MHYGEQL 108 (142)
Q Consensus 83 ~C~~~~~------------------------------------------~~~~~~w~~~~~------------~~~~~~l 108 (142)
+|.+.|. +.+.+.|.+... ......|
T Consensus 171 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L 250 (284)
T 2rik_A 171 TCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSI 250 (284)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEE
T ss_pred EEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEE
Confidence 9999764 346788875211 1112478
Q ss_pred EEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 109 NITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 109 ~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 251 ~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~ 283 (284)
T 2rik_A 251 HILNVDSADIGEYQCKASNDVGS-YTCVGSITLK 283 (284)
T ss_dssp EECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEC
T ss_pred EEcCCCcccCEEEEEEEEeCCCc-eeEEEEEEEc
Confidence 89999999999999999999996 6777888875
No 20
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.86 E-value=1.9e-20 Score=134.10 Aligned_cols=133 Identities=20% Similarity=0.401 Sum_probs=104.8
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAY 82 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y 82 (142)
.+..+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+..+.+..+.... ...|.|.++..+|+|.|
T Consensus 380 ~V~~~P~~~~---~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 455 (570)
T 3b43_A 380 KVKEPPVFRK---KPHPVETLKGADVHLECELQGTPPFQVSWHK-DKRELRSGKKYKIMSENFLTSIHILNVDSADIGEY 455 (570)
T ss_dssp CEECCCEECS---CCCCEEECTTCCEEEEEEEESSSSCCCEEEE-TTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred EecCCCeeec---CCCceeecCCCEEEEEEEEecCCCCEEEEEE-CCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEE
Confidence 4556888876 6777888999999999999999999999999 88887655443332222 24799999999999999
Q ss_pred EEEEEec------------------------------------------CCccEEEEEEE-ec------------cccce
Q psy15390 83 LCIATKI------------------------------------------GPLKIFWEIIF-HM------------HYGEQ 107 (142)
Q Consensus 83 ~C~~~~~------------------------------------------~~~~~~w~~~~-~~------------~~~~~ 107 (142)
.|.+.|. +++.+.|.+.. .. .....
T Consensus 456 ~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~ 535 (570)
T 3b43_A 456 QCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIAT 535 (570)
T ss_dssp EEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEE
T ss_pred EEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEE
Confidence 9999875 34578897531 11 12357
Q ss_pred EEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 108 LNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 108 l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 536 L~i~~~~~~d~G~Y~C~a~N~~G~-~~~~a~L~V 568 (570)
T 3b43_A 536 LQFSRAEPANAGKYTCQIKNEAGT-QECFATLSV 568 (570)
T ss_dssp EEESSCCTTCCEEEEEEEECSSCE-EEEEEEECC
T ss_pred EEECcCCHHHCEEEEEEEEECCcE-EEEEEEEEE
Confidence 999999999999999999999996 677888876
No 21
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.86 E-value=1.6e-20 Score=118.52 Aligned_cols=124 Identities=23% Similarity=0.415 Sum_probs=94.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCccee----------cCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPIS----------INKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~----------~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+. .....+.... +..|.|.+++..|+|.|.|.+
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~v~~~D~G~Y~C~~ 84 (212)
T 1f97_A 7 AQSDVQVPENESIKLTCTYSGFSSPRVEWKF-VQGSTTALVCYNSQITAPYADRVTFS-SSGITFSSVTRKDNGEYTCMV 84 (212)
T ss_dssp SCSEEEEETTCCEEEECEEESCSSEEEEEEE-EETTEEEEEEETTEECGGGTTTEEEE-TTEEEESCCCGGGCEEEEEEE
T ss_pred cCCCeEEEcCCCEEEEeEeCCCCCcEEEEEE-CCCceeeEEecCCcccccccCcEEee-ceeEEEcccCcccCeEEEEEE
Confidence 6778889999999999999988888999999 554421 1112222222 378999999999999999998
Q ss_pred Eec---------------------------------------------CCccEEEEEEEe-c------------------
Q psy15390 87 TKI---------------------------------------------GPLKIFWEIIFH-M------------------ 102 (142)
Q Consensus 87 ~~~---------------------------------------------~~~~~~w~~~~~-~------------------ 102 (142)
.+. +.+.+.|.+... .
T Consensus 85 ~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~ 164 (212)
T 1f97_A 85 SEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTI 164 (212)
T ss_dssp EETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEE
T ss_pred EccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEe
Confidence 863 345788865322 1
Q ss_pred -cccceEEEccCCCCCCeEEEEEEecCCCCC-eeeEEEEEEC
Q psy15390 103 -HYGEQLNITKISRTEMGAYLCIATNNVPPS-VSKRITVDVE 142 (142)
Q Consensus 103 -~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~-~s~~~~l~V~ 142 (142)
...+.|.|.+++.+|+|.|+|.|.|..|.. .+..+.|.|+
T Consensus 165 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 165 DPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp CTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred cCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 235679999999999999999999999875 4777877763
No 22
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.86 E-value=1.2e-20 Score=129.31 Aligned_cols=122 Identities=26% Similarity=0.438 Sum_probs=95.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec-------
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI------- 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~------- 89 (142)
.+....+.+|+++.|.|.+.+.|.+.+.|++.++..+... .+ ....++.|.|.+++.+|+|.|+|.+.|.
T Consensus 211 ~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~--~~-~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 287 (384)
T 3kld_A 211 FPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK--AR-RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAK 287 (384)
T ss_dssp CCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTT--CE-ECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccccc--ce-ecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEE
Confidence 3556778899999999999999999999999556555332 11 2334568999999999999999999875
Q ss_pred -----------------------------------CCccEEEEEEEec--------cccceEEEccCCCCCCeEEEEEEe
Q psy15390 90 -----------------------------------GPLKIFWEIIFHM--------HYGEQLNITKISRTEMGAYLCIAT 126 (142)
Q Consensus 90 -----------------------------------~~~~~~w~~~~~~--------~~~~~l~i~~~~~~d~g~y~C~a~ 126 (142)
+.+.+.|.+.... ...+.|.|..+..+|+|.|+|.|.
T Consensus 288 ~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~ 367 (384)
T 3kld_A 288 GQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAE 367 (384)
T ss_dssp EEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEEEEEE
Confidence 4568889753211 134589999999999999999999
Q ss_pred cCCCCCeeeEEEEEEC
Q psy15390 127 NNVPPSVSKRITVDVE 142 (142)
Q Consensus 127 n~~~~~~s~~~~l~V~ 142 (142)
|..|. .+..+.|.|.
T Consensus 368 N~~G~-~~~~a~L~V~ 382 (384)
T 3kld_A 368 NKHGV-IFSSAELSVI 382 (384)
T ss_dssp ETTEE-EEEEEEEEEC
T ss_pred eCCce-EEeceEEEEe
Confidence 99996 6777777773
No 23
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.86 E-value=7.5e-21 Score=120.62 Aligned_cols=129 Identities=18% Similarity=0.204 Sum_probs=95.3
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEec-CCCCeeEEEecCCcceecCCcceEEeec-cc--eEEEeecCCCCCeEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQPISINKRKKVHMHY-GE--QLNITKISRTEMGAYL 83 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~--~l~i~~v~~~d~G~y~ 83 (142)
+|.|.. +....+.+|+.+.|.|.+.+ .|.+.+.|++ +|+.+..+.+.++.... ++ .|.|.+++.+|+|.|+
T Consensus 3 ~p~~~~----~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~k-ng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~ 77 (207)
T 3rbs_A 3 DPFTKS----ELAVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYT 77 (207)
T ss_dssp ---CCE----EEEEEECGGGCEEEEEECSCCCSCCEEEEEE-TTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEE
T ss_pred CCeeec----CCceEEEeCCeEEEEEEEecCCCCCEEEEEE-CCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEE
Confidence 566654 34678999999999999864 6889999999 99998766655544432 12 6999999999999999
Q ss_pred EEEEe------------------------------------------------------------c-CCccEEEEEEEe-
Q psy15390 84 CIATK------------------------------------------------------------I-GPLKIFWEIIFH- 101 (142)
Q Consensus 84 C~~~~------------------------------------------------------------~-~~~~~~w~~~~~- 101 (142)
|.+.| . +.+.+.|.+...
T Consensus 78 C~a~Ng~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~ 157 (207)
T 3rbs_A 78 FQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDERE 157 (207)
T ss_dssp EEEEETTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEE
T ss_pred EEEECCCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEE
Confidence 94432 0 346788875311
Q ss_pred --------c-cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 102 --------M-HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 102 --------~-~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
. .....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.++
T Consensus 158 l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~L~~~ 206 (207)
T 3rbs_A 158 ISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK-DKSRLKLVDE 206 (207)
T ss_dssp ECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEE-EEEEEEECCC
T ss_pred CCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCE-EEEEEEEecC
Confidence 1 11236999999999999999999999996 6777777653
No 24
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.86 E-value=3.1e-20 Score=115.66 Aligned_cols=130 Identities=22% Similarity=0.284 Sum_probs=93.7
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCC-CCeeEEEecCCcceecCC-cceEEe--eccceEEEeecCCCCCeEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFP-APEIKWRREDNQPISINK-RKKVHM--HYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~-~~~~~w~~~~~~~~~~~~-~~~~~~--~~~~~l~i~~v~~~d~G~y~ 83 (142)
|+.+.. .+....+.+|+++.|.|.+.+.+ .+.+.|++.++..+.... +..... .....|.|.+++..|+|.|.
T Consensus 2 p~~v~~---~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 78 (191)
T 1epf_A 2 VLQVDI---VPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYK 78 (191)
T ss_dssp -CCEEE---ESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred ceEEEe---cCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEE
Confidence 455555 67778899999999999998866 778999985666665322 222111 23457999999999999999
Q ss_pred EEEEec-------------------------------------------CCccEEEEEEEe-----------ccccceEE
Q psy15390 84 CIATKI-------------------------------------------GPLKIFWEIIFH-----------MHYGEQLN 109 (142)
Q Consensus 84 C~~~~~-------------------------------------------~~~~~~w~~~~~-----------~~~~~~l~ 109 (142)
|.+.+. +.+.+.|.+... ....+.|.
T Consensus 79 C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~ 158 (191)
T 1epf_A 79 CVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ 158 (191)
T ss_dssp EEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEE
T ss_pred EEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEE
Confidence 998865 335788865311 12344799
Q ss_pred EccCCCCCCeEEEEEEecCCCC-CeeeEEEEE
Q psy15390 110 ITKISRTEMGAYLCIATNNVPP-SVSKRITVD 140 (142)
Q Consensus 110 i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~ 140 (142)
|.+++.+|+|.|+|.|.|..+. ..+..+.|.
T Consensus 159 i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 159 IRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp ETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred ECCCChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 9999999999999999998754 334444444
No 25
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.86 E-value=1.2e-19 Score=112.94 Aligned_cols=124 Identities=24% Similarity=0.326 Sum_probs=92.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEEEEEEEec------
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAYLCIATKI------ 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y~C~~~~~------ 89 (142)
.+....+.+|+++.|.|.+.+.|. .+.|++.++..+....+....... ...|.|.++...|+|.|.|.+.+.
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~ 86 (189)
T 2v44_A 8 SLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQE 86 (189)
T ss_dssp SCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEE
T ss_pred cCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEE
Confidence 677888999999999999998877 899999666666544333322221 247999999999999999999864
Q ss_pred -------------------------------------CCccEEEEEEEe-----------ccccceEEEccCCCCCCeEE
Q psy15390 90 -------------------------------------GPLKIFWEIIFH-----------MHYGEQLNITKISRTEMGAY 121 (142)
Q Consensus 90 -------------------------------------~~~~~~w~~~~~-----------~~~~~~l~i~~~~~~d~g~y 121 (142)
+.+.+.|.+... ....+.|.|.+++.+|+|.|
T Consensus 87 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 166 (189)
T 2v44_A 87 ATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIY 166 (189)
T ss_dssp EEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEE
T ss_pred EEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEE
Confidence 335788975421 22345799999999999999
Q ss_pred EEEEecCCCCC-eeeEEEEEE
Q psy15390 122 LCIATNNVPPS-VSKRITVDV 141 (142)
Q Consensus 122 ~C~a~n~~~~~-~s~~~~l~V 141 (142)
+|.|.|..+.. .+..+.|.|
T Consensus 167 ~C~a~n~~~~~~~~~~~~v~V 187 (189)
T 2v44_A 167 RCEGRVEARGEIDFRDIIVIV 187 (189)
T ss_dssp EEEEEETTTTEEEEEEEEEEE
T ss_pred EEEEEccccCceeeeeEEEEE
Confidence 99999988653 344555544
No 26
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.85 E-value=5.1e-20 Score=131.93 Aligned_cols=132 Identities=24% Similarity=0.447 Sum_probs=101.7
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAYL 83 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y~ 83 (142)
+..||.|.. ....+.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....+.++.... ...|.|.+++..|+|.|+
T Consensus 2 v~~pP~f~~---~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 77 (570)
T 3b43_A 2 AMEPPYFIE---PLEHVEAAIGEPITLQCKVDGTPEIRIAWYK-EHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYT 77 (570)
T ss_dssp CCCCCEEEE---CCCCEEECTTSCEEEEEEEESSSSCEEEEEC-SSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEE
T ss_pred CCCCCcceE---ECCceEEcCCCEEEEEEEEccCCCCEEEEEE-CCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEE
Confidence 456899988 6778889999999999999999999999999 88877655444433322 257999999999999999
Q ss_pred EEEEec---------------------------------------------CCccEEEEEEE------------eccccc
Q psy15390 84 CIATKI---------------------------------------------GPLKIFWEIIF------------HMHYGE 106 (142)
Q Consensus 84 C~~~~~---------------------------------------------~~~~~~w~~~~------------~~~~~~ 106 (142)
|.+.|. +++.+.|.+.. ......
T Consensus 78 C~a~N~~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~ 157 (570)
T 3b43_A 78 CKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVA 157 (570)
T ss_dssp EEEEETTEEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEE
T ss_pred EEEEeCCceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEE
Confidence 999864 33578887521 112235
Q ss_pred eEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 107 QLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 107 ~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.|.|..+..+|+|.|+|.|.|..|. .+....|.|
T Consensus 158 ~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v 191 (570)
T 3b43_A 158 TLQILQTDQSHVGQYNCSASNPLGT-ASSSAKLTL 191 (570)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred EEEECcCChHHCEEEEEEEEeCCcE-EEEEEEEEE
Confidence 7899999999999999999998875 444444443
No 27
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.85 E-value=5.9e-21 Score=119.84 Aligned_cols=130 Identities=10% Similarity=0.172 Sum_probs=91.7
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
..+|.+.. .+.. .+.+|++++|.|.+.+.+. .+.|++ ++..+............++.|.|.+++..|+|.|+|.
T Consensus 3 ~~~P~i~~---~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 76 (196)
T 2d3v_A 3 LSKATLWA---EPGS-VISRGNSVTIRCQGTLEAQ-EYRLVK-EGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCY 76 (196)
T ss_dssp CCBCEEEE---ESCS-EEETTCCEEEEEECCTTCC-EEEEEE-TTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEe---CCCC-cccCCCeEEEEEeCCCCCc-EEEEEE-CCCCCCcccccccCCccccEEEeccCChhHCeEEEEE
Confidence 35677776 4543 7889999999999987765 899999 7776543211110122345799999999999999999
Q ss_pred EEec---------------------------------------------CCccEEEEEEEec-----------c---ccc
Q psy15390 86 ATKI---------------------------------------------GPLKIFWEIIFHM-----------H---YGE 106 (142)
Q Consensus 86 ~~~~---------------------------------------------~~~~~~w~~~~~~-----------~---~~~ 106 (142)
+.|. .++.+.|.+.... . ...
T Consensus 77 a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p~~~~W~k~g~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 2d3v_A 77 YYSPAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRFDRFILTEEGDHKLSWTLDSQLTPSGQFQA 156 (196)
T ss_dssp EEETTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESSCCSEEEEEEC---CCEEEEECEECTTSCEEE
T ss_pred EeCCCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCCCEEEEEccCCcccccccccccccCCCcee
Confidence 8653 1246778653211 1 126
Q ss_pred eEEEccCCCCCCeEEEEEEecCCC----CCeeeEEEEEE
Q psy15390 107 QLNITKISRTEMGAYLCIATNNVP----PSVSKRITVDV 141 (142)
Q Consensus 107 ~l~i~~~~~~d~g~y~C~a~n~~~----~~~s~~~~l~V 141 (142)
.|.|.+++.+|+|.|+|.|.|..+ ...|..+.|.|
T Consensus 157 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 195 (196)
T 2d3v_A 157 LFPVGPVTPSHRWMLRCYGSRRHILQVWSEPSDLLEIPV 195 (196)
T ss_dssp EEECCCCBTTBCEEEEEEEEETTEEEEECCCCCCEEECC
T ss_pred EEEeeecCcccCeeEEEEEEccCCCCccCCCCccEEEEe
Confidence 799999999999999999999754 23466777766
No 28
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.85 E-value=1.2e-20 Score=120.53 Aligned_cols=133 Identities=19% Similarity=0.363 Sum_probs=98.7
Q ss_pred CCCeeeecC-CCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcce--EEeeccceEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTE-STPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKK--VHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~--~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
.+|.|..+. ..+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+....... ........|.|.+++..|+|.|+
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEE-CCccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 356665421 13367789999999999999998888999999 887775433221 12334457999999999999999
Q ss_pred EEEEec-----------------------------------------------CCccEEEEEEE----------------
Q psy15390 84 CIATKI-----------------------------------------------GPLKIFWEIIF---------------- 100 (142)
Q Consensus 84 C~~~~~-----------------------------------------------~~~~~~w~~~~---------------- 100 (142)
|.+.+. +.+.+.|.+..
T Consensus 93 C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 172 (231)
T 3ojm_B 93 CVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLK 172 (231)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEE
T ss_pred EEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEe
Confidence 999864 33578887620
Q ss_pred -------eccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 101 -------HMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 101 -------~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.......|.|..+..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 173 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 219 (231)
T 3ojm_B 173 VLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQ-ANQSAWLTV 219 (231)
T ss_dssp EEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred EecccccccCCccEEEEecCCHHHCeEEEEEEEeccce-EeeEEEEEE
Confidence 0112346999999999999999999999986 577777766
No 29
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.85 E-value=2.3e-20 Score=118.88 Aligned_cols=124 Identities=19% Similarity=0.291 Sum_probs=97.1
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
..+.+.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+... .+..|.|.+++..|+|.|.|.+
T Consensus 17 ~~~~i~~---~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~~ 84 (218)
T 3k0w_A 17 RGSKITV---NPESKAVLAGQFVKLCCRATGHPFVQYQWFK-MNKEIPNG--------NTSELIFNAVHVKDAGFYVCRV 84 (218)
T ss_dssp --CCEEE---CCCCEEEETTSBEEEECEETTTTSSEEEEEE-TTEECTTC--------CSSEEEETTCCGGGCEEEEEEE
T ss_pred CCCEEEE---CCCCeEEeCCCcEEEEeeecCCCCCEEEEEE-CCEECCCC--------CCCEEEEccCChhhCeEeEEEE
Confidence 4567777 7888899999999999999998888999999 77765432 3457999999999999999998
Q ss_pred Eec----------------------------------------------------------CCccEEEEEEEe---cccc
Q psy15390 87 TKI----------------------------------------------------------GPLKIFWEIIFH---MHYG 105 (142)
Q Consensus 87 ~~~----------------------------------------------------------~~~~~~w~~~~~---~~~~ 105 (142)
.+. +.+.+.|.+... ....
T Consensus 85 ~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~ 164 (218)
T 3k0w_A 85 NNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK 164 (218)
T ss_dssp ECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS
T ss_pred EcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC
Confidence 854 123566654321 1234
Q ss_pred ceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 106 EQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 106 ~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
..|.|..+..+|+|.|+|.|.|..|...+..+.|.|.
T Consensus 165 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 165 KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 5799999999999999999999888767777877763
No 30
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.85 E-value=4.5e-20 Score=122.63 Aligned_cols=125 Identities=21% Similarity=0.407 Sum_probs=90.2
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc--ceEEEeecCC-CCCeE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG--EQLNITKISR-TEMGA 81 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~l~i~~v~~-~d~G~ 81 (142)
...||.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+............+ ..|.|.+++. .|+|.
T Consensus 3 ~~~~P~~~~---~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k-~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~ 78 (304)
T 2yd9_A 3 GEEPPRFIK---EPKDQIGVSGGVASFVCQATGDPKPRVTWNK-KGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENV 78 (304)
T ss_dssp -CCCCEEEE---CCCCEEEETTSCEEEEEEEECSSCCEEEEC--------CTTEEEEEETTTTEEEEEECSCCTTTTCSE
T ss_pred CccCCeeee---cCCceEecCCCeEEEEEEEEEeCCCeEEEEE-CCEECCCCceEEEEecCCCceEEEEecccccCCCeE
Confidence 457899988 7888899999999999999999999999999 777764432222111222 4799999998 99999
Q ss_pred EEEEEEec-------------------------------------------------CCccEEEEEEE------------
Q psy15390 82 YLCIATKI-------------------------------------------------GPLKIFWEIIF------------ 100 (142)
Q Consensus 82 y~C~~~~~-------------------------------------------------~~~~~~w~~~~------------ 100 (142)
|+|.+.|. +.+.+.|.+..
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~ 158 (304)
T 2yd9_A 79 YECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRI 158 (304)
T ss_dssp EEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSE
T ss_pred EEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceE
Confidence 99999764 22467886521
Q ss_pred eccccceEEEccCCCCCCeEEEEEEecCCCCCe
Q psy15390 101 HMHYGEQLNITKISRTEMGAYLCIATNNVPPSV 133 (142)
Q Consensus 101 ~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~ 133 (142)
.....+.|.|..++.+|+|.|+|.|.|..|...
T Consensus 159 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 191 (304)
T 2yd9_A 159 KQLRSGALQIESSEETDQGKYECVATNSAGVRY 191 (304)
T ss_dssp EECTTSCEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred EeCCCeEEEEccCCcccCEEEEEEEEeCCCCEE
Confidence 122345799999999999999999999887633
No 31
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.85 E-value=2.8e-19 Score=118.68 Aligned_cols=130 Identities=25% Similarity=0.410 Sum_probs=100.0
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC-cceEEeeccc--eEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK-RKKVHMHYGE--QLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~--~l~i~~v~~~d~G~y~ 83 (142)
.+|.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+.... +.......++ .|.|.+++..|+|.|+
T Consensus 3 ~~P~~~~---~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 78 (305)
T 2nzi_A 3 MAPHFKE---ELRNLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQ 78 (305)
T ss_dssp CCCEEEE---CCCCEEECTTCCEEEEEEEECSSCCEEEEEE-TTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEE
T ss_pred CCCeeee---cccceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEE
Confidence 5788888 7788999999999999999999999999999 777765432 2222222333 7999999999999999
Q ss_pred EEEEec-----------------------------------------------CCccEEEEEEEec------------cc
Q psy15390 84 CIATKI-----------------------------------------------GPLKIFWEIIFHM------------HY 104 (142)
Q Consensus 84 C~~~~~-----------------------------------------------~~~~~~w~~~~~~------------~~ 104 (142)
|.+.|. +.+.+.|.+.... ..
T Consensus 79 C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~ 158 (305)
T 2nzi_A 79 VRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRS 158 (305)
T ss_dssp EEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSS
T ss_pred EEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCC
Confidence 999864 2356778653111 12
Q ss_pred cceEEEcc-CCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 105 GEQLNITK-ISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 105 ~~~l~i~~-~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
...|.|.+ +..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 159 ~~~l~i~~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~v 195 (305)
T 2nzi_A 159 FTSLVFPNGVERKDAGFYVVCAKNRFGI-DQKTVELDV 195 (305)
T ss_dssp EEEEEETTCCCSTTCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred ceEEEEecCCccCccEEEEEEEEeCCCc-eeeEEEEEE
Confidence 35788888 9999999999999999986 566676665
No 32
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.85 E-value=2e-21 Score=120.07 Aligned_cols=123 Identities=20% Similarity=0.299 Sum_probs=92.8
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCC-eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAP-EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
..+|.+.. .+..+.+.+|++++|.|.+.+.+.+ .+.|++ ++..+. ..+..|.|.+++..|+|.|.|
T Consensus 2 ~~~P~i~~---~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~-~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C 68 (176)
T 1f2q_A 2 PQKPKVSL---NPPWNRIFKGENVTLTCNGNNFFEVSSTKWFH-NGSLSE---------ETNSSLNIVNAKFEDSGEYKC 68 (176)
T ss_dssp --CCCCEE---ESSCSEEETTCCEEEECCTTCC----CCEEEE-TTEECS---------CCSSEEEECSCCGGGCEEEEE
T ss_pred CCCCEEEc---CCCCcceecCCcEEEEEeCCCCCCcceEEEEE-CCeECC---------CCceEEEEeccceecCEEEEE
Confidence 34677776 6777789999999999999887765 699999 776553 235689999999999999999
Q ss_pred EEEec----------------------------------------CCccEEEEEEEec----cccceEEEccCCCCCCeE
Q psy15390 85 IATKI----------------------------------------GPLKIFWEIIFHM----HYGEQLNITKISRTEMGA 120 (142)
Q Consensus 85 ~~~~~----------------------------------------~~~~~~w~~~~~~----~~~~~l~i~~~~~~d~g~ 120 (142)
.+.+. +.+.+.|.+.... .....|.|.+++.+|+|.
T Consensus 69 ~~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~ 148 (176)
T 1f2q_A 69 QHQQVNESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGT 148 (176)
T ss_dssp ECTTSSCCCCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGGGCEE
T ss_pred EcCCccccccEEEEEeCcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcccCEE
Confidence 98764 1246778753221 236789999999999999
Q ss_pred EEEEEecCCCCCeeeEEEEEE
Q psy15390 121 YLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 121 y~C~a~n~~~~~~s~~~~l~V 141 (142)
|+|.|.|..+...+..+.|.|
T Consensus 149 Y~C~a~n~~~~~~s~~~~l~V 169 (176)
T 1f2q_A 149 YYCTGKVWQLDYESEPLNITV 169 (176)
T ss_dssp EEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEeCCcceEecCEEEEE
Confidence 999999976555666677766
No 33
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.85 E-value=1.9e-20 Score=114.78 Aligned_cols=122 Identities=20% Similarity=0.326 Sum_probs=94.6
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCC-CCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFP-APEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+|.+.. .+....+.+|+++.|.|.+.+.| .+.+.|++ ++..+... ...+.+.+++..|+|.|+|.+
T Consensus 4 ~p~i~~---~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~-~g~~~~~~---------~~~~~~~~~~~~d~G~Y~C~~ 70 (170)
T 3ry4_A 4 KAVLKL---EPPWINVLQEDSVTLTCQGARSPESDSIQWFH-NGNLIPTH---------TQPSYRFKANNNDSGEYTCQT 70 (170)
T ss_dssp BCEEEE---ESCCSEEETTCEEEEEEESCCCSSSSCEEEEE-TTEECTTC---------CSSEEEEECCGGGCEEEEEEE
T ss_pred CCEEEe---CCCCeEEECCCcEEEEEEecCCCCcceEEEEE-CCeEcccC---------ccceEEEecccccCeEEEEEE
Confidence 344544 56667789999999999998876 56899999 88766432 345778899999999999998
Q ss_pred Eec----------------------------------------CCccEEEEEE----EeccccceEEEccCCCCCCeEEE
Q psy15390 87 TKI----------------------------------------GPLKIFWEII----FHMHYGEQLNITKISRTEMGAYL 122 (142)
Q Consensus 87 ~~~----------------------------------------~~~~~~w~~~----~~~~~~~~l~i~~~~~~d~g~y~ 122 (142)
.+. +.+.+.|.+. ........|.|..++.+|+|.|+
T Consensus 71 ~~~~~s~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~ 150 (170)
T 3ry4_A 71 GQTSLSDPVHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYH 150 (170)
T ss_dssp TTSBCCCCEEEEEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGGCEEEE
T ss_pred eCCCceEeEEEEEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccCCEEEE
Confidence 753 1256778652 12234568999999999999999
Q ss_pred EEEecCCCCCeeeEEEEEEC
Q psy15390 123 CIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 123 C~a~n~~~~~~s~~~~l~V~ 142 (142)
|.|.|..|...+..+.|.|+
T Consensus 151 C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 151 CTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp EEEEETTEEEECCCEEEEEC
T ss_pred EEEEeCcCccccccEEEEEC
Confidence 99999998767888888885
No 34
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.85 E-value=3.9e-20 Score=119.05 Aligned_cols=134 Identities=22% Similarity=0.351 Sum_probs=99.3
Q ss_pred CCCeeeecC-CCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcc--eEEeeccceEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTE-STPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRK--KVHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~--~~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
.+|.|..+. ..+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+...... .........|.|.+++..|+|.|+
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 88 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYT 88 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEE-TTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEE-CCcccCCCCcccceeeeccceEEEEEeCCcccCEEEE
Confidence 467776532 13456789999999999999999888999999 88776543321 112334458999999999999999
Q ss_pred EEEEec-----------------------------------------------CCccEEEEEE----Eec----------
Q psy15390 84 CIATKI-----------------------------------------------GPLKIFWEII----FHM---------- 102 (142)
Q Consensus 84 C~~~~~-----------------------------------------------~~~~~~w~~~----~~~---------- 102 (142)
|.+.+. +.+.+.|.+. ...
T Consensus 89 C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 168 (241)
T 3grw_A 89 CVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVT 168 (241)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEE
T ss_pred EEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeee
Confidence 998764 3357888762 110
Q ss_pred ----------cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 103 ----------HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 103 ----------~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 169 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 217 (241)
T 3grw_A 169 VLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGV-AEKAFWLSVH 217 (241)
T ss_dssp EEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEC-
T ss_pred eeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcce-EEEEEEEEec
Confidence 02346899999999999999999999986 5777777763
No 35
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.85 E-value=6e-20 Score=121.06 Aligned_cols=130 Identities=20% Similarity=0.340 Sum_probs=98.0
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......+.....++.|.|.+++..|+|.|.|.+
T Consensus 97 ~~~~~~~---~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 172 (291)
T 2wim_A 97 QKLTFRE---VVSPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEG 172 (291)
T ss_dssp CCCBCCS---CCCSEEEETTSCEEECCCCBCSSCCEEEEEC-C----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEE
T ss_pred CCcceEe---CCCChhhcCCCCEEEEEEEccCCCCEEEEEE-CCccccccCCceEEEccCCCEEEEecchhhCEEEEEEE
Confidence 4555554 5566788999999999999998989999999 77666543344444556678999999999999999998
Q ss_pred Eec----------------------------------------------CCccEEEEEEEe----------ccccceEEE
Q psy15390 87 TKI----------------------------------------------GPLKIFWEIIFH----------MHYGEQLNI 110 (142)
Q Consensus 87 ~~~----------------------------------------------~~~~~~w~~~~~----------~~~~~~l~i 110 (142)
.+. +.+.+.|.+... ......|.|
T Consensus 173 ~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i 252 (291)
T 2wim_A 173 RVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTV 252 (291)
T ss_dssp EETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEE
T ss_pred EECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEEE
Confidence 764 335788875321 123467999
Q ss_pred ccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 111 TKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 111 ~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 253 ~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~v 282 (291)
T 2wim_A 253 RNIINSDGGPYVCRATNKAGE-DEKQAFLQV 282 (291)
T ss_dssp ESCCSTTCEEEEEEEEETTEE-EEEEEEEEC
T ss_pred eeCCcccCEEEEEEEEECCCc-eeeeEEEEE
Confidence 999999999999999999996 677777765
No 36
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.85 E-value=2.6e-20 Score=115.96 Aligned_cols=123 Identities=20% Similarity=0.233 Sum_probs=91.5
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+.. .+.+|++++|.|.+.+ +.+.+.|++ ++.. ....++.|.|.+++..|+|.|+|
T Consensus 5 ~~~~P~i~~---~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k-~g~~---------~~~~~~~L~i~~v~~~D~G~Y~C 69 (184)
T 2gi7_A 5 PLPKPSLQA---LPSS-LVPLEKPVTLRCQGPP-GVDLYRLEK-LSSS---------RYQDQAVLFIPAMKRSLAGRYRC 69 (184)
T ss_dssp CBCCCEEEE---ESCS-EEETTCCEEEEEECST-TCSEEEEEE-TTTC---------CEESSSEEEESSCCGGGCEEEEE
T ss_pred CCCCCeEEe---CCCc-cccCCCcEEEEEeCCC-CCCEEEEEE-CCcc---------ccCcccEEEECcCChhhCceEEE
Confidence 345777776 4544 7889999999999877 677899999 6664 12345689999999999999999
Q ss_pred EEEec---------------------------------------------CCccEEEEEEEecc--------ccceEEEc
Q psy15390 85 IATKI---------------------------------------------GPLKIFWEIIFHMH--------YGEQLNIT 111 (142)
Q Consensus 85 ~~~~~---------------------------------------------~~~~~~w~~~~~~~--------~~~~l~i~ 111 (142)
.+.|. +++.+.|.+..... ....|.|.
T Consensus 70 ~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~i~ 149 (184)
T 2gi7_A 70 SYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGFDQFALYKEGDPAPYKNPERWYRASFPII 149 (184)
T ss_dssp EEEETTEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCCCEEEEEECCCCTTSCCCCEEEEESSSEE
T ss_pred EEEcCCCccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCCcEEEEEECCCcCcceecCCCceEEEEEc
Confidence 99873 12356665542221 23457888
Q ss_pred cCCCCCCeEEEEEEecCCCC----CeeeEEEEEEC
Q psy15390 112 KISRTEMGAYLCIATNNVPP----SVSKRITVDVE 142 (142)
Q Consensus 112 ~~~~~d~g~y~C~a~n~~~~----~~s~~~~l~V~ 142 (142)
+++.+|+|.|+|.|.|..++ ..|..+.|.|.
T Consensus 150 ~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~Vt 184 (184)
T 2gi7_A 150 TVTAAHSGTYRCYSFSSRDPYLWSAPSDPLELVVT 184 (184)
T ss_dssp EETTCCSEEEEEEEECTTSTTBCCCCCCCEEEECC
T ss_pred cCCccCCeEEEEEEEeCCCCcccCCCCCcEEEEeC
Confidence 99999999999999997543 34777887763
No 37
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.84 E-value=2.8e-20 Score=116.88 Aligned_cols=131 Identities=16% Similarity=0.152 Sum_probs=93.3
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
..+|.+.. .+. ..+.+|++++|.|.+.+.+. .+.|++ ++..+............+..|.|.+++..|+|.|+|.
T Consensus 3 ~~~P~i~~---~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 76 (198)
T 1ugn_A 3 LPKPTLWA---EPG-SVITQGSPVTLRCQGGQETQ-EYRLYR-EKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCY 76 (198)
T ss_dssp CCCCEEEE---ESC-SEEETTCCEEEEEECCTTCC-CEEEEE-SSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEE
T ss_pred CCCCeEec---cCC-CcccCCCcEEEEEEecCCCc-EEEEEE-CCccccccccccccCCcccEEEECCCCHHHCeEEEEE
Confidence 35777776 454 37889999999999988765 699999 7776632111111123456899999999999999999
Q ss_pred EEec----------------------------------------------CCccEEEEEEEec-----------c---cc
Q psy15390 86 ATKI----------------------------------------------GPLKIFWEIIFHM-----------H---YG 105 (142)
Q Consensus 86 ~~~~----------------------------------------------~~~~~~w~~~~~~-----------~---~~ 105 (142)
+.|. ..+.+.|.+.... . ..
T Consensus 77 a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 156 (198)
T 1ugn_A 77 YGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFDGFILCKEGEDEHPQCLNSQPHARGSSR 156 (198)
T ss_dssp EEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSCCSEEEEEEC------CEEEC------CCE
T ss_pred EECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCCCcEEEEEECCCccCCccccccccCCCcce
Confidence 8652 1146777643211 1 13
Q ss_pred ceEEEccCCCCCCeEEEEEEecCCCCCe----eeEEEEEEC
Q psy15390 106 EQLNITKISRTEMGAYLCIATNNVPPSV----SKRITVDVE 142 (142)
Q Consensus 106 ~~l~i~~~~~~d~g~y~C~a~n~~~~~~----s~~~~l~V~ 142 (142)
..|.|.+++.+|+|.|+|.|.|..++.. |..+.|.|+
T Consensus 157 ~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 157 AIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred eEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 6799999999999999999999876433 778888773
No 38
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.84 E-value=1.8e-20 Score=119.76 Aligned_cols=132 Identities=12% Similarity=0.074 Sum_probs=92.4
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccc--eEEEeecCCCCCeEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGE--QLNITKISRTEMGAY 82 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~--~l~i~~v~~~d~G~y 82 (142)
+..+|.+.. .+. ..+.+|++++|.|.+.+ +.+.+.|++ +|..+............+. .|.|.+++..|+|.|
T Consensus 6 ~~~~P~i~~---~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k-~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 79 (218)
T 1uct_A 6 DFPMPFISA---KSS-PVIPLDGSVKIQCQAIR-EAYLTQLMI-IKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRY 79 (218)
T ss_dssp GSCCCCEEE---SSC-SEEETTCCEEEEECCCT-TCSEEEEEE-EETTEEEECSEECC----CCCEEEECSCCGGGCEEE
T ss_pred CCCCCEEEe---cCC-CccCCCCCEEEEEEcCC-CCCEEEEEE-CCCcccccccccCCCCcceeeEEEEcccccccCEEE
Confidence 356788876 555 47889999999999876 567899999 7776543221110112234 899999999999999
Q ss_pred EEEEEec----------------------------------------------CCccEEEEEEEe--------ccccceE
Q psy15390 83 LCIATKI----------------------------------------------GPLKIFWEIIFH--------MHYGEQL 108 (142)
Q Consensus 83 ~C~~~~~----------------------------------------------~~~~~~w~~~~~--------~~~~~~l 108 (142)
+|.+.|. +.+.+.|.+... ......|
T Consensus 80 ~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L 159 (218)
T 1uct_A 80 QCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANF 159 (218)
T ss_dssp EEEEEETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEE
T ss_pred EEEEEcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEE
Confidence 9999863 123566654311 1235679
Q ss_pred EEccCCCCCCeEEEEEEecCCC----CCeeeEEEEEEC
Q psy15390 109 NITKISRTEMGAYLCIATNNVP----PSVSKRITVDVE 142 (142)
Q Consensus 109 ~i~~~~~~d~g~y~C~a~n~~~----~~~s~~~~l~V~ 142 (142)
.|.+++.+|+|.|+|.|.|... ...|..+.|.|+
T Consensus 160 ~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (218)
T 1uct_A 160 SLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVT 197 (218)
T ss_dssp ECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC
T ss_pred EEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEe
Confidence 9999999999999999998532 245677777774
No 39
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=6.1e-20 Score=114.61 Aligned_cols=130 Identities=16% Similarity=0.188 Sum_probs=91.1
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+|.+.. .+.. .+.+|++++|.|.+.+. .+.+.|++ ++..+............+..|.|.+++..|+|.|+|.+
T Consensus 3 ~~P~i~~---~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k-~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 76 (188)
T 1oll_A 3 PKPFIWA---EPHF-MVPKEKQVTICCQGNYG-AVEYQLHF-EGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIY 76 (188)
T ss_dssp CCCEEEE---ESCS-EEETTCCEEEEEECCTT-CCEEEEEE-TTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEe---ecCC-cCCCCCCEEEEEecCCC-CCEEEEEE-CCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEe
Confidence 3677766 4555 78899999999998653 45889999 77765421110001123457999999999999999998
Q ss_pred Eec---------------------------------------------CCccEEEEEEEe--------ccccceEEEccC
Q psy15390 87 TKI---------------------------------------------GPLKIFWEIIFH--------MHYGEQLNITKI 113 (142)
Q Consensus 87 ~~~---------------------------------------------~~~~~~w~~~~~--------~~~~~~l~i~~~ 113 (142)
.+. +++.+.|.+... ......|.|.++
T Consensus 77 ~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v 156 (188)
T 1oll_A 77 RVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPV 156 (188)
T ss_dssp EETTEECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSSSCSEEEEEEESSSCEEEEEECSSEEEEEEEEC
T ss_pred cCCCCCCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCCCCCEEEEEECCccccccccCCCceeEEEECCC
Confidence 652 123566755321 223567999999
Q ss_pred CCCCCeEEEEEEecCC--CCCeeeEEEEEEC
Q psy15390 114 SRTEMGAYLCIATNNV--PPSVSKRITVDVE 142 (142)
Q Consensus 114 ~~~d~g~y~C~a~n~~--~~~~s~~~~l~V~ 142 (142)
+.+|+|.|+|.|.|.. ....|..+.|.|.
T Consensus 157 ~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 157 TTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp CGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 9999999999999854 2345778888773
No 40
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.83 E-value=1.1e-19 Score=114.76 Aligned_cols=132 Identities=29% Similarity=0.503 Sum_probs=96.6
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCc---ceEEeeccce-----EEEeecCCC
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKR---KKVHMHYGEQ-----LNITKISRT 77 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~---~~~~~~~~~~-----l~i~~v~~~ 77 (142)
..||.+.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+..... .......++. +.|.+++..
T Consensus 7 ~~pp~i~~---~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 82 (212)
T 2v9r_A 7 DFPPRIVE---HPSDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRP 82 (212)
T ss_dssp CEEEEEEE---CCCCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCC
T ss_pred cCCcceec---CCCceEEeCCCcEEEEEEcCCCCCCEEEEEE-CCEEeeccccccccceEEecCCcEEEEEEEecCCCcc
Confidence 35788887 7888899999999999999988888999999 7776643321 1111222333 344567899
Q ss_pred CCeEEEEEEEec---------------------------------------------CCccEEEEEEEe---------cc
Q psy15390 78 EMGAYLCIATKI---------------------------------------------GPLKIFWEIIFH---------MH 103 (142)
Q Consensus 78 d~G~y~C~~~~~---------------------------------------------~~~~~~w~~~~~---------~~ 103 (142)
|+|.|.|.+.+. +.+.+.|.+... ..
T Consensus 83 d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~ 162 (212)
T 2v9r_A 83 DEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITI 162 (212)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEE
T ss_pred cCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEc
Confidence 999999998864 335788865211 11
Q ss_pred ccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 104 YGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 104 ~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
..+.|.|..++.+|+|.|+|.|.|..|...+..+.|.|
T Consensus 163 ~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V 200 (212)
T 2v9r_A 163 RGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTV 200 (212)
T ss_dssp ETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEE
Confidence 24579999999999999999999998875455566666
No 41
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.83 E-value=1.6e-19 Score=123.84 Aligned_cols=131 Identities=22% Similarity=0.422 Sum_probs=98.8
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
+|.+..+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+..... .....++.|.|.++...|+|.|+|.+.
T Consensus 219 ~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 295 (404)
T 3p3y_A 219 TPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYK-KGGDLPSDKA--KFENFNKALRITNVSEEDSGEYFCLAS 295 (404)
T ss_dssp CCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEE-TTBCCCTTTE--EEEGGGTEEEESSCCGGGCEEEEEEEE
T ss_pred CCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEE-CCEECCCCcc--cccccCceEEEccCCHhHCEEEEEEEE
Confidence 4454443222345678899999999999999999999999 8877654332 123345689999999999999999998
Q ss_pred ec------------------------------------------CCccEEEEEEEec-----------cccceEEEccCC
Q psy15390 88 KI------------------------------------------GPLKIFWEIIFHM-----------HYGEQLNITKIS 114 (142)
Q Consensus 88 ~~------------------------------------------~~~~~~w~~~~~~-----------~~~~~l~i~~~~ 114 (142)
|. +.+.+.|.+.... ...+.|.|.+++
T Consensus 296 n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~ 375 (404)
T 3p3y_A 296 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQ 375 (404)
T ss_dssp CSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCC
T ss_pred eCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecC
Confidence 75 3467888753211 124579999999
Q ss_pred CCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 115 RTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 115 ~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 376 ~~d~G~Y~C~a~N~~G~-~~~~~~l~V~ 402 (404)
T 3p3y_A 376 ISSRAVYQCNTSNEHGY-LLANAFVSVL 402 (404)
T ss_dssp SSCCCEEEEEEEETTEE-EEEEEEEEEC
T ss_pred HHHCEEEEEEEEeCCCc-EEEEEEEEEE
Confidence 99999999999999996 6777777763
No 42
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.82 E-value=3.3e-19 Score=112.36 Aligned_cols=124 Identities=21% Similarity=0.238 Sum_probs=92.2
Q ss_pred CceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecC-----------------CcceEEeeccceEEEeecCCCCCe
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISIN-----------------KRKKVHMHYGEQLNITKISRTEMG 80 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~-----------------~~~~~~~~~~~~l~i~~v~~~d~G 80 (142)
+....+.+|+++.|.|...+.+.+.+.|++ ++...... ...+.....++.|.|.+++..|+|
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G 84 (208)
T 3r4d_A 6 AVPPQVAEDNNVLLLVHNLPLALGAFAWYK-GNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMG 84 (208)
T ss_dssp EESSEEETTCCEEEEEECCCSSCSEEEEEE-SSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCE
T ss_pred CccceeecCCcEEEEEeCCCCCceEEEecc-CCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCe
Confidence 344678899999999998777888999998 43221110 112233344567999999999999
Q ss_pred EEEEEEEec-------------------------------------------CCccEEEEEEE----------eccccce
Q psy15390 81 AYLCIATKI-------------------------------------------GPLKIFWEIIF----------HMHYGEQ 107 (142)
Q Consensus 81 ~y~C~~~~~-------------------------------------------~~~~~~w~~~~----------~~~~~~~ 107 (142)
.|.|.+.+. .++.+.|.+.. .......
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~pp~i~W~~~g~~l~~~~~~~~~~~~~~ 164 (208)
T 3r4d_A 85 VYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSI 164 (208)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTTCEEEEEETTEECCCCSSEEEETTTTE
T ss_pred EEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCCCceEEEECCEeCCCCCCeEEcCCCCE
Confidence 999998764 22578886521 1123478
Q ss_pred EEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 108 LNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 108 l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
|.|.++..+|+|.|+|.|.|..|...+..++|.|.
T Consensus 165 L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 165 LRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp EEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred EEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 99999999999999999999999888888888763
No 43
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.82 E-value=3e-19 Score=122.50 Aligned_cols=123 Identities=24% Similarity=0.465 Sum_probs=97.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec-------
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI------- 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~------- 89 (142)
.+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+..... +.....++.|.|.++...|+|.|+|.+.|.
T Consensus 227 ~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~-~~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 304 (403)
T 3laf_A 227 RPSNVIAIEGKDAVLECCVSGYPPPSFTWLR-GEEVIQLRSK-KYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISAS 304 (403)
T ss_dssp CCCCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECCCSSS-SEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCCceEecCCCcEEEEEEcCCCCCCeEEEEE-CCeeccCCCc-eEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEE
Confidence 4556778899999999999998989999999 7776654332 223455678999999999999999999864
Q ss_pred -----------------------------------CCccEEEEEEE---------eccccceEEEccCCCCCCeEEEEEE
Q psy15390 90 -----------------------------------GPLKIFWEIIF---------HMHYGEQLNITKISRTEMGAYLCIA 125 (142)
Q Consensus 90 -----------------------------------~~~~~~w~~~~---------~~~~~~~l~i~~~~~~d~g~y~C~a 125 (142)
+.+.+.|.+.. .....+.|.|..+..+|+|.|+|.|
T Consensus 305 ~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 384 (403)
T 3laf_A 305 AELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVA 384 (403)
T ss_dssp EEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEE
T ss_pred EEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEE
Confidence 44678887532 1223567999999999999999999
Q ss_pred ecCCCCCeeeEEEEEEC
Q psy15390 126 TNNVPPSVSKRITVDVE 142 (142)
Q Consensus 126 ~n~~~~~~s~~~~l~V~ 142 (142)
.|..|. .+..+.|.|+
T Consensus 385 ~N~~G~-~~~~~~l~V~ 400 (403)
T 3laf_A 385 ENEAGN-AQSSAQLIVP 400 (403)
T ss_dssp EETTEE-EEEEEEEECC
T ss_pred EcCCce-EEEEEEEEEe
Confidence 999996 6777888774
No 44
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.82 E-value=7.7e-19 Score=120.05 Aligned_cols=128 Identities=26% Similarity=0.453 Sum_probs=93.5
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecC--CcceecCC---cceEEee---ccceEEEeecCCCCC
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRRED--NQPISINK---RKKVHMH---YGEQLNITKISRTEM 79 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~--~~~~~~~~---~~~~~~~---~~~~l~i~~v~~~d~ 79 (142)
+|.+.. +....+.+|+++.|.|.+.+.|.+.+.|++ + |..+.... ..++... ..+.|.|.+++..|+
T Consensus 1 ~P~i~~----~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 75 (389)
T 2jll_A 1 QPHIIQ----LKNETTYENGQVTLVCDAEGEPIPEITWKR-AVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDS 75 (389)
T ss_dssp CCEEEE----CCCEEEETTSEEEEEEEEECSSCCEEEEEE-TTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGC
T ss_pred CCeEEe----cCceEEeCCCeEEEEEEeecccCCeEEEEe-CCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhC
Confidence 466665 345567789999999999999999999999 6 77664321 1222222 235899999999999
Q ss_pred eEEEEEEEec------------------------------------------CCccEEEEEEEec--------------c
Q psy15390 80 GAYLCIATKI------------------------------------------GPLKIFWEIIFHM--------------H 103 (142)
Q Consensus 80 G~y~C~~~~~------------------------------------------~~~~~~w~~~~~~--------------~ 103 (142)
|.|.|.+.|. +.+.+.|.+.... .
T Consensus 76 G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~ 155 (389)
T 2jll_A 76 GRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTG 155 (389)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECS
T ss_pred EEEEEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccC
Confidence 9999999874 3457888653111 1
Q ss_pred ccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 104 YGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 104 ~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 156 ~~~~L~i~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~v 192 (389)
T 2jll_A 156 RKMILEIAPTSDNDFGRYNCTATNHIGT-RFQEYILAL 192 (389)
T ss_dssp SCEEEEECCCSTTSSEEEEEEEEETTEE-EEEEEEEEE
T ss_pred CEEEEEECCCChhhCEEEEEEEEcCCCc-EEEEEEEEe
Confidence 1346899999999999999999999886 455555543
No 45
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.82 E-value=4.5e-20 Score=116.22 Aligned_cols=123 Identities=20% Similarity=0.431 Sum_probs=92.2
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcce----------ecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPI----------SINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+ ......++... +..|.|.+++..|+|.|.|.+
T Consensus 10 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~~~~~d~G~Y~C~~ 87 (209)
T 1nbq_A 10 SEPEVRIPENNPVKLSCAYSGFSSPRVEWKF-DQGDTTRLVCYNNKITASYEDRVTFL-PTGITFKSVTREDTGTYTCMV 87 (209)
T ss_dssp SCSBCCEETTCCCEEECEEESCSSEEEEEEE-EETTEEEESEETTEECTTTTTTCEEE-TTEEECSCCCTTSCSEEEEEE
T ss_pred CCCceEEEcCCCEEEEEEEeCCCCcEEEEEE-cCCceeEEEEecCccCccccCceEee-ccEEEEeeCCHHHCcEEEEEE
Confidence 6677788999999999999988888999999 54442 11111222222 368999999999999999998
Q ss_pred Eec---------------------------------------------CCccEEEEEEEec-------------------
Q psy15390 87 TKI---------------------------------------------GPLKIFWEIIFHM------------------- 102 (142)
Q Consensus 87 ~~~---------------------------------------------~~~~~~w~~~~~~------------------- 102 (142)
.+. +.+.+.|.+....
T Consensus 88 ~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (209)
T 1nbq_A 88 SEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLN 167 (209)
T ss_dssp EETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCC
T ss_pred ecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEc
Confidence 863 3357888753211
Q ss_pred cccceEEEccCCCCCCeEEEEEEecCCCCC-eeeEEEEEE
Q psy15390 103 HYGEQLNITKISRTEMGAYLCIATNNVPPS-VSKRITVDV 141 (142)
Q Consensus 103 ~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~-~s~~~~l~V 141 (142)
...+.|.|.+++.+|+|.|+|.|.|..|.. .+..+.|.|
T Consensus 168 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 168 PTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp TTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred CCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 134579999999999999999999999874 466676666
No 46
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.82 E-value=1.4e-19 Score=102.37 Aligned_cols=95 Identities=22% Similarity=0.437 Sum_probs=72.4
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+||.|.. .+..+.+.+|+.+.|.|.+.+.|.+.+.|++ +++.+......++.....
T Consensus 4 ~PP~i~~---~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k-~g~~i~~~~~~~~~~~~~-------------------- 59 (100)
T 3knb_A 4 IPPKIEA---LPSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHSQEQGRFHIENT-------------------- 59 (100)
T ss_dssp EEEEECC---CCSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCTTGGGTEEEEEC--------------------
T ss_pred CCCEEEe---CCCcEEEeCCCeEEEEEEEEEecCCEEEEEE-CceEeeeeccceeeeecc--------------------
Confidence 5788877 7888999999999999999999999999999 888775443322211111
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 60 ----------------~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l~V~ 98 (100)
T 3knb_A 60 ----------------DDLTTLIIMDVQKQDGGLYTLSLGNEFGS-DSATVNIHIR 98 (100)
T ss_dssp ----------------SSEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred ----------------cceEEEEEcCCCccCCEEEEEEEEECCCE-EEEEEEEEEE
Confidence 01234888888899999999999998886 6777888774
No 47
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.82 E-value=8.1e-19 Score=113.37 Aligned_cols=124 Identities=17% Similarity=0.251 Sum_probs=87.7
Q ss_pred CCceeEEecCCcEEEEEEEec---CCCCeeEEEecCCccee----------------------------cCCcceEEeec
Q psy15390 17 TPSSVAVREEFNITLTCKAEG---FPAPEIKWRREDNQPIS----------------------------INKRKKVHMHY 65 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~---~~~~~~~w~~~~~~~~~----------------------------~~~~~~~~~~~ 65 (142)
.+..+.+.+|+++.|.|.+.+ .+.+.+.|++ ++.... .....+.....
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLK-GASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEE-EEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEe-CCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc
Confidence 455788999999999999987 7778899999 443210 00111211111
Q ss_pred --cceEEEeecCCCCCeEEEEEEEec---------------------------------------------------CCc
Q psy15390 66 --GEQLNITKISRTEMGAYLCIATKI---------------------------------------------------GPL 92 (142)
Q Consensus 66 --~~~l~i~~v~~~d~G~y~C~~~~~---------------------------------------------------~~~ 92 (142)
+..|.|.+++.+|+|.|.|.+.+. +.+
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 247999999999999999998762 335
Q ss_pred cEEEEEEEecc---------------------------------ccceEEEccCCCCCCeEEEEEEecCCCC--CeeeEE
Q psy15390 93 KIFWEIIFHMH---------------------------------YGEQLNITKISRTEMGAYLCIATNNVPP--SVSKRI 137 (142)
Q Consensus 93 ~~~w~~~~~~~---------------------------------~~~~l~i~~~~~~d~g~y~C~a~n~~~~--~~s~~~ 137 (142)
.+.|.+..... ....|.|.+++.+|+|.|+|.|.|..|. ..+..+
T Consensus 167 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~ 246 (250)
T 2fbo_J 167 NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246 (250)
T ss_dssp EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEE
T ss_pred eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeE
Confidence 78897653211 2268999999999999999999996654 234445
Q ss_pred EEEE
Q psy15390 138 TVDV 141 (142)
Q Consensus 138 ~l~V 141 (142)
.|.|
T Consensus 247 ~l~V 250 (250)
T 2fbo_J 247 ILKV 250 (250)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 5543
No 48
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.81 E-value=5.7e-19 Score=120.81 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=94.0
Q ss_pred CceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee---ccceEEEeecCCCCCeEEEEEEEec-----
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH---YGEQLNITKISRTEMGAYLCIATKI----- 89 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~v~~~d~G~y~C~~~~~----- 89 (142)
+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......++... .+..|.|.++...|+|.|.|.+.|.
T Consensus 219 ~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~-~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 297 (395)
T 1bih_A 219 SKDMMAKAGDVTMIYCMYGSNPMGYPNYFK-NGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQ 297 (395)
T ss_dssp CCSEEEETTSCEEEEEEEECSSCCCCEEEE-TTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCE
T ss_pred CCceEEECCCcEEEEEEeccCCCCeEEEEE-CCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCce
Confidence 345678899999999999999999999999 8877755433333221 2237999999999999999999864
Q ss_pred ---------------------------------------CCccEEEEEEEec-------cccceEEEccCCCCCCeEEEE
Q psy15390 90 ---------------------------------------GPLKIFWEIIFHM-------HYGEQLNITKISRTEMGAYLC 123 (142)
Q Consensus 90 ---------------------------------------~~~~~~w~~~~~~-------~~~~~l~i~~~~~~d~g~y~C 123 (142)
+.+.+.|.+.... ...+.|.|.++..+|+|.|+|
T Consensus 298 ~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 377 (395)
T 1bih_A 298 KHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGC 377 (395)
T ss_dssp EEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSSSEEEETTEEEESSCCSTTCEEEEE
T ss_pred EEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCCceEEECCEEEEeeCCcccCEEEEE
Confidence 3356777643111 123489999999999999999
Q ss_pred EEecCCCCCeeeEEEEEE
Q psy15390 124 IATNNVPPSVSKRITVDV 141 (142)
Q Consensus 124 ~a~n~~~~~~s~~~~l~V 141 (142)
.|.|..|. .+..+.|.|
T Consensus 378 ~a~N~~G~-~~~~~~l~V 394 (395)
T 1bih_A 378 RATNEHGD-KYFETLVQV 394 (395)
T ss_dssp EEEETTEE-EEEEEEEEE
T ss_pred EEEccCCC-ceEEEEEEE
Confidence 99999996 677788877
No 49
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.81 E-value=1e-18 Score=116.05 Aligned_cols=129 Identities=22% Similarity=0.339 Sum_probs=93.2
Q ss_pred CeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC-cceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 9 PNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK-RKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 9 p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.... ..++....++.|.|.+++..|+|.|.|.+.
T Consensus 109 p~i~~---~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 184 (304)
T 2yd9_A 109 PNIDM---GPQLKVVERTRTATMLCAASGNPDPEITWFK-DFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVAT 184 (304)
T ss_dssp CEEEE---CCCCEEEETTSCEEECCEEECSSCCEEEEEE-TTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEE
T ss_pred Ceeec---CCccEEEeCCCeEEEEEECccCCCCeEEEEE-CCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEE
Confidence 56665 5667788899999999999999999999999 777765432 223334556689999999999999999998
Q ss_pred ec----------------------------------------------CCccEEEEEEEecc------ccceEEEccCCC
Q psy15390 88 KI----------------------------------------------GPLKIFWEIIFHMH------YGEQLNITKISR 115 (142)
Q Consensus 88 ~~----------------------------------------------~~~~~~w~~~~~~~------~~~~l~i~~~~~ 115 (142)
|. +.+.+.|.+..... ..+.+.+.....
T Consensus 185 n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~ 264 (304)
T 2yd9_A 185 NSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV 264 (304)
T ss_dssp ETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSC
T ss_pred eCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccccCCcEEEEEccc
Confidence 64 33567776532111 122333333444
Q ss_pred CCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 116 TEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 116 ~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 265 ~d~G~Y~C~a~N~~G~-~~~~~~l~V~ 290 (304)
T 2yd9_A 265 KDSANYTCVAMSSLGV-IEAVAQITVK 290 (304)
T ss_dssp CSCEEEEEEEEETTEE-EEEEEEEC--
T ss_pred ccCEEEEEEEEeCCCc-EEEEEEEEEe
Confidence 7999999999999986 5777777663
No 50
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.81 E-value=1.6e-19 Score=114.23 Aligned_cols=111 Identities=16% Similarity=0.116 Sum_probs=78.5
Q ss_pred eeEEecCCcEEEEEE---EecCCCCeeEEEecCCcceecC---------------CcceEEe---eccceEEEeecCCCC
Q psy15390 20 SVAVREEFNITLTCK---AEGFPAPEIKWRREDNQPISIN---------------KRKKVHM---HYGEQLNITKISRTE 78 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~---~~~~~~~~~~w~~~~~~~~~~~---------------~~~~~~~---~~~~~l~i~~v~~~d 78 (142)
.+++..|++++|.|. +.+.|.+.+.|++ +|...... ...+... .....|.|.+++.+|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFK-LGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEE-EETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEE-cCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 567889999999996 4567888999999 55432110 0011111 122369999999999
Q ss_pred CeEEEEEEEec------------------------------------------CCccEEEEEE-------------Eecc
Q psy15390 79 MGAYLCIATKI------------------------------------------GPLKIFWEII-------------FHMH 103 (142)
Q Consensus 79 ~G~y~C~~~~~------------------------------------------~~~~~~w~~~-------------~~~~ 103 (142)
+|.|.|.+.|. |.|.+.|.+. +...
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~ 160 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKE 160 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEEC
T ss_pred CeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEe
Confidence 99999999875 5678999531 1122
Q ss_pred ccceEE---EccCCCCCCeEEEEEEecCCCC
Q psy15390 104 YGEQLN---ITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 ~~~~l~---i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
.++.+. +.++..+|+|.|+|.|.|..|.
T Consensus 161 ~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~ 191 (203)
T 4fa8_A 161 KDGSLSVAVDLSLPKPWHLPVTCVGKNDKEE 191 (203)
T ss_dssp TTSCEEEEEEEEECSSCCCCEEEEEESSSCE
T ss_pred CCCCEEEEEECCCCHHHCEEEEEEEEcCCCE
Confidence 234443 4678999999999999999996
No 51
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.81 E-value=1.9e-18 Score=113.90 Aligned_cols=131 Identities=23% Similarity=0.283 Sum_probs=94.0
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCC-CCeeEEEecCCcceecCC-cceEEe--eccceEEEeecCCCCCeEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFP-APEIKWRREDNQPISINK-RKKVHM--HYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~-~~~~~w~~~~~~~~~~~~-~~~~~~--~~~~~l~i~~v~~~d~G~y~ 83 (142)
||.+.. .+....+.+|+++.|.|.+.+.+ .+.+.|++.+|..+.... +..+.. .....|.|.+++..|+|.|+
T Consensus 2 ~~~v~~---~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 78 (291)
T 1qz1_A 2 VLQVDI---VPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYK 78 (291)
T ss_dssp CCCEEE---ESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CcceEe---cCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEE
Confidence 566666 67788899999999999998876 679999985666665332 222111 13357999999999999999
Q ss_pred EEEEec-------------------------------------------CCccEEEEEEE-----------eccccceEE
Q psy15390 84 CIATKI-------------------------------------------GPLKIFWEIIF-----------HMHYGEQLN 109 (142)
Q Consensus 84 C~~~~~-------------------------------------------~~~~~~w~~~~-----------~~~~~~~l~ 109 (142)
|.+.+. +.+.+.|.+.. .....+.|.
T Consensus 79 C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~ 158 (291)
T 1qz1_A 79 CVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ 158 (291)
T ss_dssp EEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEE
T ss_pred EEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEE
Confidence 998865 23567886532 122355799
Q ss_pred EccCCCCCCeEEEEEEecCCCC-CeeeEEEEEE
Q psy15390 110 ITKISRTEMGAYLCIATNNVPP-SVSKRITVDV 141 (142)
Q Consensus 110 i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~V 141 (142)
|..++.+|+|.|+|.|.|..+. ..+..+.|.|
T Consensus 159 i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v 191 (291)
T 1qz1_A 159 IRGIKKTDEGTYRCEGRILARGEINFKDIQVIV 191 (291)
T ss_dssp ETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEE
T ss_pred EccCccccCeEEEEEEEecCCCceeeEEEEEEE
Confidence 9999999999999999986533 2233444443
No 52
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.81 E-value=4.1e-19 Score=111.67 Aligned_cols=124 Identities=10% Similarity=0.158 Sum_probs=84.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCC-----CeeEEEecCCcceecCCcceEEee----ccceEEEeecCCCCCeEEEEEEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPA-----PEIKWRREDNQPISINKRKKVHMH----YGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~-----~~~~w~~~~~~~~~~~~~~~~~~~----~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
.+..+.+.+|+++.|.|.+.+.|. +.+.|++.++.......+..+... .+..|.|.+++.+|+|.|.|.+.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 445778999999999999988775 689999933333322222221111 22579999999999999999988
Q ss_pred ec-----------------------------------------CCccEEEEEE-------Eecccc---ceEEEccCCCC
Q psy15390 88 KI-----------------------------------------GPLKIFWEII-------FHMHYG---EQLNITKISRT 116 (142)
Q Consensus 88 ~~-----------------------------------------~~~~~~w~~~-------~~~~~~---~~l~i~~~~~~ 116 (142)
+. +.+.+.|.+. ...... ..+.+..+..+
T Consensus 88 ~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~ 167 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKPQ 167 (202)
T ss_dssp ETTEEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEECCC
T ss_pred eCCCcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEEcC
Confidence 64 3356777421 111111 34556688899
Q ss_pred CCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 117 EMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 117 d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
|+|.|+|.|.|..|. .+..+.|.|
T Consensus 168 d~G~Y~C~a~N~~g~-~~~~~~l~v 191 (202)
T 3bp6_B 168 PSRNFSCMFWNAHMK-ELTSAIIDP 191 (202)
T ss_dssp TTCCEEEEEEETTTT-EEEEEEECC
T ss_pred CCCEEEEEEEcCCcc-cccEEEEEe
Confidence 999999999999986 566666654
No 53
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.81 E-value=3.3e-19 Score=110.66 Aligned_cols=121 Identities=17% Similarity=0.295 Sum_probs=88.7
Q ss_pred ceeEEecCCcEEEEEEEecCCCCeeEEEecCCcc--eec----------CCcceEEee----c--cceEEEeecCCCCCe
Q psy15390 19 SSVAVREEFNITLTCKAEGFPAPEIKWRREDNQP--ISI----------NKRKKVHMH----Y--GEQLNITKISRTEMG 80 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~--~~~----------~~~~~~~~~----~--~~~l~i~~v~~~d~G 80 (142)
..+.+.+|+++.|.|.+.+.+.+.+.|++ ++.. +.. ....+.... . ...|.|.+++.+|+|
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G 81 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKN-SNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSD 81 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEE-TTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEe-CCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCE
Confidence 35678899999999999888888999999 5542 211 001122222 1 335999999999999
Q ss_pred EEEEEEEec----------------------------------CCccEEEEEEE--eccccceEEEccCCCCCCeEEEEE
Q psy15390 81 AYLCIATKI----------------------------------GPLKIFWEIIF--HMHYGEQLNITKISRTEMGAYLCI 124 (142)
Q Consensus 81 ~y~C~~~~~----------------------------------~~~~~~w~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 124 (142)
.|.|.+.+. +.+.+.|.+.. .......|.|.+++.+|+|.|+|.
T Consensus 82 ~Y~C~~~~~~~~~~l~V~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 161 (184)
T 2ny1_B 82 TYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCT 161 (184)
T ss_dssp EEEEEETTEEEEEEEEEEEEEESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEEESSEEEESSCCGGGCEEEEEE
T ss_pred EEEEEEEcCCCcEEEEEEEecCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccccCceEEEEecCCcCCCeEEEEE
Confidence 999998653 45678886431 123456899999999999999999
Q ss_pred EecCCCCCeeeEEEEEE
Q psy15390 125 ATNNVPPSVSKRITVDV 141 (142)
Q Consensus 125 a~n~~~~~~s~~~~l~V 141 (142)
|.|..+. .+..+.|.|
T Consensus 162 a~n~~~~-~~~~~~l~V 177 (184)
T 2ny1_B 162 VLQNQKK-VEFKIDIVV 177 (184)
T ss_dssp EEETTEE-EEEEEEEEE
T ss_pred EEECCce-EEEEEEEEE
Confidence 9997765 677777766
No 54
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.80 E-value=8e-19 Score=119.78 Aligned_cols=126 Identities=25% Similarity=0.399 Sum_probs=96.4
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
+|.+... .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+... .......|.|.++...|+|.|+|.+.
T Consensus 206 ~P~~~~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~-~~~~~~~~-----~~~~~~~L~i~~~~~~d~G~Y~C~a~ 277 (382)
T 1cs6_A 206 APSIKAK--FPADTYALTGQMVTLECFAFGNPVPQIKWRK-LDGSQTSK-----WLSSEPLLHIQNVDFEDEGTYECEAE 277 (382)
T ss_dssp EEEEEEC--CCSEEEEETTCCEEEECEEEEESCCEEEEEE-CCSCCSCC-----CSBSSSEEEECSCCGGGCEEEEEEEE
T ss_pred CCceecc--CCCceEEeCCCeEEEEEEEccCCCCEEEEEE-CCcccccE-----EecCCcEEEEccCChhhCEEEEEEEE
Confidence 4555441 3457788899999999999999999999999 55544321 12345679999999999999999997
Q ss_pred ec------------------------------------------CCccEEEEEEEec--------cccceEEEccCCCCC
Q psy15390 88 KI------------------------------------------GPLKIFWEIIFHM--------HYGEQLNITKISRTE 117 (142)
Q Consensus 88 ~~------------------------------------------~~~~~~w~~~~~~--------~~~~~l~i~~~~~~d 117 (142)
|. +.+.+.|.+.... ...+.|.|.++..+|
T Consensus 278 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d 357 (382)
T 1cs6_A 278 NIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLED 357 (382)
T ss_dssp ETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGG
T ss_pred cCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCccc
Confidence 64 4467888753211 124579999999999
Q ss_pred CeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 118 MGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 118 ~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
+|.|+|.|.|..|. .+..+.|.|+
T Consensus 358 ~G~Y~C~a~N~~G~-~~~~~~l~V~ 381 (382)
T 1cs6_A 358 SGMYQCVAENKHGT-VYASAELTVQ 381 (382)
T ss_dssp CEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred CEEEEEEEEeCCCe-EEEEEEEEEe
Confidence 99999999999996 6777888773
No 55
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.80 E-value=1.2e-18 Score=114.97 Aligned_cols=131 Identities=15% Similarity=0.230 Sum_probs=98.6
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCC-CeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCe-EE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPA-PEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMG-AY 82 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~y 82 (142)
+..+|.... .+....+.+|+.+.|.|.+.+ |. +.+.|++.+|..+... .++....++.|.|.+++..|+| .|
T Consensus 88 V~~~~~~~~---~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~--~~~~~~~~~~L~i~~v~~~d~G~~Y 161 (290)
T 2o26_X 88 VRDPAKLFL---VGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTD--LTFVPNPKAGITIKNVKRAYHRLCV 161 (290)
T ss_dssp EECSSCCBC---CCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTT--CEEEEETTTEEEEESCCGGGTTCEE
T ss_pred EeCCCcccc---cccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCC--CceeeCCCCCEEEecccHHHCCCEE
Confidence 344565543 566778889999999999985 66 7899965488777543 3333455568999999999999 99
Q ss_pred EEEEEec-----------------------------------------------CCcc-EEEEEEEec------------
Q psy15390 83 LCIATKI-----------------------------------------------GPLK-IFWEIIFHM------------ 102 (142)
Q Consensus 83 ~C~~~~~-----------------------------------------------~~~~-~~w~~~~~~------------ 102 (142)
+|.+.|. +.+. +.|.+....
T Consensus 162 ~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~ 241 (290)
T 2o26_X 162 RCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSW 241 (290)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEE
T ss_pred EEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeeccccc
Confidence 9999864 2244 899764322
Q ss_pred -------cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 103 -------HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 103 -------~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
...+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 242 ~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 287 (290)
T 2o26_X 242 HRGDFNYERQETLTISSARVDDSGVFMCYANNTFGS-ANVTTTLKVV 287 (290)
T ss_dssp EEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCE-EEEEEEECC-
T ss_pred ccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCc-EEEEEEEEEE
Confidence 22457999999999999999999999986 5777777763
No 56
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.80 E-value=1.9e-18 Score=118.55 Aligned_cols=130 Identities=22% Similarity=0.404 Sum_probs=98.7
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceec-CCcceEEeeccceEEEeecCCCCCeEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI-NKRKKVHMHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
.+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+.. ....+.....++.|.|.+++..|+|.|+|.
T Consensus 120 ~p~~~~~---~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 195 (403)
T 3laf_A 120 GPLRFLS---QTESITAFMGDTVLLKCEVIGDPMPTIHWQK-NQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCS 195 (403)
T ss_dssp CCCEECS---CCCCEEEETTSCEEECCCEECSSCCEEEEEE-SSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEE
T ss_pred CCCcccc---CCCcEEEEcCCeEEEEEEEcccCCCeEEEEE-CCEeccccCCceEEEEcCCceEEEcccccccCEEEEEE
Confidence 4666655 6677889999999999999998988999999 7776642 222333445567899999999999999999
Q ss_pred EEec-------------------------------------------------CCccEEEEEEE----------eccccc
Q psy15390 86 ATKI-------------------------------------------------GPLKIFWEIIF----------HMHYGE 106 (142)
Q Consensus 86 ~~~~-------------------------------------------------~~~~~~w~~~~----------~~~~~~ 106 (142)
+.|. +.+.+.|.+.. ......
T Consensus 196 ~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~ 275 (403)
T 3laf_A 196 ARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGS 275 (403)
T ss_dssp EECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTT
T ss_pred EEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCcc
Confidence 9863 23467776421 112245
Q ss_pred eEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 107 QLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 107 ~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 276 ~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 309 (403)
T 3laf_A 276 NLLISNVTDDDSGTYTCVVTYKNEN-ISASAELTV 309 (403)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred EEEEeCCCHHHCEEEEEEEEcCCCc-eEEEEEEEE
Confidence 7999999999999999999998875 566666665
No 57
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.80 E-value=3.5e-18 Score=116.89 Aligned_cols=124 Identities=20% Similarity=0.339 Sum_probs=98.4
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEec-CCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y 82 (142)
.+..+|.|.. .+..+.+.+|+.+.|.|.+.+ .|.+.+.|++ +|..+............+++|.|.+++..|+|.|
T Consensus 2 ~v~~~P~~~~---~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k-~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 77 (395)
T 1bih_A 2 PVDKYPVLKD---QPAEVLFRENNPTVLECIIEGNDQGVKYSWKK-DGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHY 77 (395)
T ss_dssp ---CCCEECC---CCSEEEEETTSCEEECCCEESCCSSCEEEEEE-SSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEE
T ss_pred CcCCCCEeec---CCCceEEeCCCEEEEEEEEecCCCCceEEEEE-CCcCcccccceEEEecCCceEEEecCCCCCCcEE
Confidence 3667899988 788889999999999999998 7888999999 8887765543333344556899999999999999
Q ss_pred EEEEEec--------------------------------------------CCccEEEEEEE----------------ec
Q psy15390 83 LCIATKI--------------------------------------------GPLKIFWEIIF----------------HM 102 (142)
Q Consensus 83 ~C~~~~~--------------------------------------------~~~~~~w~~~~----------------~~ 102 (142)
+|.+.|. +.+.+.|.+.. ..
T Consensus 78 ~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 157 (395)
T 1bih_A 78 QCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITA 157 (395)
T ss_dssp EEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEE
T ss_pred EEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEE
Confidence 9999864 33578887764 11
Q ss_pred cccceEEEccCCCCCCe---EEEEEEecCCCC
Q psy15390 103 HYGEQLNITKISRTEMG---AYLCIATNNVPP 131 (142)
Q Consensus 103 ~~~~~l~i~~~~~~d~g---~y~C~a~n~~~~ 131 (142)
...+.|.|.+++.+|+| .|+|.|.|..+.
T Consensus 158 ~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~ 189 (395)
T 1bih_A 158 GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVD 189 (395)
T ss_dssp CTTSCEEEEEECGGGCCSSEEEEEEEECTTCS
T ss_pred cCCCcEEEEEEeeccCCCceEEEEEEEecccc
Confidence 23457999999999999 999999998876
No 58
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.80 E-value=1.2e-18 Score=121.06 Aligned_cols=124 Identities=16% Similarity=0.250 Sum_probs=88.0
Q ss_pred CCceeEEecCCcEEEEEEEec-CCCCeeEEEecCCcceecCCcce-EE------eeccceEEEeecCCCCCeEEEEEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQPISINKRKK-VH------MHYGEQLNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~-~~------~~~~~~l~i~~v~~~d~G~y~C~~~~ 88 (142)
.+....+.+|+.+.|.|.+.+ .|.+.+.|++ ++..+....... .. ....+.|.|.+++..|+|.|+|.+.|
T Consensus 233 ~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N 311 (423)
T 3qs7_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL-ENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSK 311 (423)
T ss_dssp STTEEEEETTSCEEEEEEEEESSSCCCEEEEE-SSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETT
T ss_pred CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEE-CCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEec
Confidence 344678899999999999998 6678999999 777664331110 01 12234699999999999999999876
Q ss_pred c-----------------------------------------CCccEEEEEEEecc--------ccceEEEccCCCCCCe
Q psy15390 89 I-----------------------------------------GPLKIFWEIIFHMH--------YGEQLNITKISRTEMG 119 (142)
Q Consensus 89 ~-----------------------------------------~~~~~~w~~~~~~~--------~~~~l~i~~~~~~d~g 119 (142)
. +.+.+.|.+..... ....+.+.....+|+|
T Consensus 312 ~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~D~G 391 (423)
T 3qs7_E 312 HPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPG 391 (423)
T ss_dssp EEEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCS
T ss_pred CCCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccccCCcEEEEEecccccCE
Confidence 3 44678887532211 1222333677789999
Q ss_pred EEEEEEecCCCCCeeeEEEEEEC
Q psy15390 120 AYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 120 ~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.|+|.|.|..|. .+..+.|.|+
T Consensus 392 ~YtC~A~N~~G~-~~~s~~L~v~ 413 (423)
T 3qs7_E 392 EYIFHAENDDAQ-FTKMFTLNIR 413 (423)
T ss_dssp CEEEEEEETTEE-EEEEEEEC--
T ss_pred EEEEEEEcCCce-EEEEEEEEEe
Confidence 999999999996 6777877663
No 59
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.80 E-value=2.3e-18 Score=109.13 Aligned_cols=125 Identities=14% Similarity=0.213 Sum_probs=84.3
Q ss_pred CceeEEecCCcEEEEEEEecCCCC---eeEEEecCCcceecC-C------------cceEE----------eeccceEEE
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPAP---EIKWRREDNQPISIN-K------------RKKVH----------MHYGEQLNI 71 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~~---~~~w~~~~~~~~~~~-~------------~~~~~----------~~~~~~l~i 71 (142)
+..+.+..|++++|.|.+.+.+.+ .+.|++.++..+... . ..+.. ...+.+|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 445678899999999999887665 378999443332110 0 00000 112346999
Q ss_pred eecCCCCCeEEEEEEEec--------------------------------------------CCccEEEEEE--------
Q psy15390 72 TKISRTEMGAYLCIATKI--------------------------------------------GPLKIFWEII-------- 99 (142)
Q Consensus 72 ~~v~~~d~G~y~C~~~~~--------------------------------------------~~~~~~w~~~-------- 99 (142)
.+++.+|+|.|.|.+.+. +++.+.|.+.
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~ 167 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDT 167 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCc
Confidence 999999999999998764 3356666421
Q ss_pred -Eeccc------cceEEEccCCCCCCeEEEEEEecCCCC-CeeeEEEEEEC
Q psy15390 100 -FHMHY------GEQLNITKISRTEMGAYLCIATNNVPP-SVSKRITVDVE 142 (142)
Q Consensus 100 -~~~~~------~~~l~i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~V~ 142 (142)
..... .+.|.|..+...|+|.|+|.|.|..+. ..+..+.|.|+
T Consensus 168 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 168 QEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred ceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 11111 235889999999999999999998765 35667777664
No 60
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.80 E-value=8.3e-19 Score=110.67 Aligned_cols=122 Identities=14% Similarity=0.240 Sum_probs=84.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCCC---eeEEEecCCcceecCC----------------cceEEe------eccceEEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAP---EIKWRREDNQPISINK----------------RKKVHM------HYGEQLNI 71 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~---~~~w~~~~~~~~~~~~----------------~~~~~~------~~~~~l~i 71 (142)
.+..+.+.+|++++|.|.+.+.+.+ .+.|++ ++....... ..+... ..+.+|.|
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWAR-VDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEE-ECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEE-CCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 5667889999999999999887765 488998 544332110 011111 11246999
Q ss_pred eecCCCCCeEEEEEEEec--------------------------------------------CCccEEEEEEE-------
Q psy15390 72 TKISRTEMGAYLCIATKI--------------------------------------------GPLKIFWEIIF------- 100 (142)
Q Consensus 72 ~~v~~~d~G~y~C~~~~~--------------------------------------------~~~~~~w~~~~------- 100 (142)
.+++.+|+|.|.|.+.+. +++.+.|.+..
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~ 163 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSR 163 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEE
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCc
Confidence 999999999999998753 45789997421
Q ss_pred --ecc----ccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEE
Q psy15390 101 --HMH----YGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVD 140 (142)
Q Consensus 101 --~~~----~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~ 140 (142)
... ..+.|.|..+...|+|.|+|.|.|..|. .+..+.+.
T Consensus 164 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~-~~~~~t~~ 208 (218)
T 4frw_A 164 SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLL-QDQRITHI 208 (218)
T ss_dssp EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCS-SCEEEEEE
T ss_pred eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCC-eEEEEEEE
Confidence 111 1246889999999999999999999886 34444433
No 61
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.80 E-value=2.5e-18 Score=113.24 Aligned_cols=123 Identities=15% Similarity=0.199 Sum_probs=93.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCe-eEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec------
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPE-IKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI------ 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~------ 89 (142)
.+....+.+|+++.|.|.+.+.+.+. +.|++.++..+.... +.....++.|.|.+++..|+|.|+|.+.+.
T Consensus 95 ~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~--~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~ 172 (289)
T 3ejj_X 95 LAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKT--VYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTS 172 (289)
T ss_dssp SCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTC--CEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred ccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCc--cEEECCCCCEEEeecccccCEEEEEEEEeCCCcccc
Confidence 56778899999999999998876655 999875666554332 333455678999999999999999999732
Q ss_pred ------------------------------------------CCccEEEEEEEec--------------cccceEEEccC
Q psy15390 90 ------------------------------------------GPLKIFWEIIFHM--------------HYGEQLNITKI 113 (142)
Q Consensus 90 ------------------------------------------~~~~~~w~~~~~~--------------~~~~~l~i~~~ 113 (142)
+.+.+.|.+.... ...+.|.|.++
T Consensus 173 ~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 252 (289)
T 3ejj_X 173 TGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAV 252 (289)
T ss_dssp CCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSC
T ss_pred ccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEee
Confidence 2356788642110 11457999999
Q ss_pred CCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 114 SRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 114 ~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
+.+|+|.|+|.|.|..|. .+..+.|.++
T Consensus 253 ~~~d~G~Y~C~a~N~~G~-~~~s~~L~~~ 280 (289)
T 3ejj_X 253 DFQDAGIYSCVASNDVGT-RTATMNFQVV 280 (289)
T ss_dssp CSSSCEEEEEEEECSSCE-EEEEEEEECC
T ss_pred cccCCEEEEEEEEcCCCC-ccccEEEEEE
Confidence 999999999999999996 6777777653
No 62
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.79 E-value=2.8e-18 Score=111.44 Aligned_cols=120 Identities=23% Similarity=0.316 Sum_probs=93.3
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCC-eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAP-EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++ ++..+.. .+..|.|.+++..|+|.|.|.+
T Consensus 1 kP~i~~---~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~-~g~~~~~---------~~~~l~i~~~~~~d~G~Y~C~~ 67 (262)
T 3rjd_A 1 KAVITL---QPPWVSVFQEETVTLHCEVLHLPGSSSTQWFL-NGTATQT---------STPSYRITSASVNDSGEYRCQR 67 (262)
T ss_dssp CCEEEE---SSCCSEEETTCCEEEEEECSSCCCTTCEEEEE-TTEECSC---------CSSEEEESSCCGGGCEEEEEEE
T ss_pred CCeEec---CCCcEEeeCCCeEEEEEECCCCCCCceEEEEE-CCEEeec---------cCCeEEEecCCcccCeEEEEEE
Confidence 466766 6777889999999999999888877 899999 8776532 2557999999999999999999
Q ss_pred Eec----------------------------------------CCccEEEEEE----EeccccceEEEccCCCCCCeEEE
Q psy15390 87 TKI----------------------------------------GPLKIFWEII----FHMHYGEQLNITKISRTEMGAYL 122 (142)
Q Consensus 87 ~~~----------------------------------------~~~~~~w~~~----~~~~~~~~l~i~~~~~~d~g~y~ 122 (142)
.+. +.+.+.|.+. ........|.|..++.+|+|.|+
T Consensus 68 ~~~~~s~~~~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~ 147 (262)
T 3rjd_A 68 GLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYH 147 (262)
T ss_dssp SSSCCCCCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEE
T ss_pred ecCCccccEEEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhCEEEE
Confidence 764 2346778642 11223567999999999999999
Q ss_pred EEEecCCCCCeeeEEEEEE
Q psy15390 123 CIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 123 C~a~n~~~~~~s~~~~l~V 141 (142)
|.|.|..+. .+..+.|.|
T Consensus 148 C~~~n~~~~-~~~~~~l~V 165 (262)
T 3rjd_A 148 CSGMGKHRY-TSAGISVTV 165 (262)
T ss_dssp EEEESSSEE-EEECEEEEE
T ss_pred EEEeCCCCc-cccceEEEe
Confidence 999998754 555555555
No 63
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.79 E-value=5.2e-19 Score=112.32 Aligned_cols=121 Identities=15% Similarity=0.249 Sum_probs=88.2
Q ss_pred CCceeEEecC--CcEEEEEEEecCCCCeeEEEec--CCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec---
Q psy15390 17 TPSSVAVREE--FNITLTCKAEGFPAPEIKWRRE--DNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI--- 89 (142)
Q Consensus 17 ~~~~~~~~~g--~~v~l~C~~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~--- 89 (142)
.+..+.+.+| +++.|.|.+.+ |.+.+.|++. ++..+..+. +........|.|.+++.+|+|.|.|.+.|.
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~--~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGN--RISWDSKKGFTIPSYMISYAGMVFCEAKINDES 89 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSS--SCEEETTTEEEEEGGGTTTCSEEEEEEC----C
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCC--cccccCCccEEEccCChhcCceEEEEEEECCee
Confidence 3467889999 99999999976 6689999884 465554432 222344567999999999999999998653
Q ss_pred -------------------------------------------C--CccEEEEEEE-----------e---------ccc
Q psy15390 90 -------------------------------------------G--PLKIFWEIIF-----------H---------MHY 104 (142)
Q Consensus 90 -------------------------------------------~--~~~~~w~~~~-----------~---------~~~ 104 (142)
+ ++.+.|.+.. . ...
T Consensus 90 ~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 169 (213)
T 2x1w_L 90 YQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKF 169 (213)
T ss_dssp EECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEE
T ss_pred EEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceee
Confidence 1 1257885311 0 011
Q ss_pred cceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 105 GEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 105 ~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 170 ~~~L~I~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~V 205 (213)
T 2x1w_L 170 LSTLTIDGVTRSDQGLYTCAASSGLMT-KKNSTFVRV 205 (213)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred eEEEEECCCCcccCEEEEEEEecCCCc-EEEEEEEEE
Confidence 235999999999999999999999986 577777776
No 64
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.79 E-value=8e-19 Score=100.34 Aligned_cols=92 Identities=26% Similarity=0.406 Sum_probs=69.3
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.||.|.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+....+..+....
T Consensus 12 ~pP~f~~---~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k-~g~~l~~~~~~~~~~~~--------------------- 66 (107)
T 3knb_B 12 SPPCFLR---FPRPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASERLSFPADG--------------------- 66 (107)
T ss_dssp EEEEEEE---CCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEECCEET---------------------
T ss_pred CCCEEEe---CCCcEEEeCCCcEEEEEEEEEecCCEEEEEE-CcccccceeeEEEeecC---------------------
Confidence 5799988 7888999999999999999999999999999 88877543322211100
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 67 -----------------~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~V 103 (107)
T 3knb_B 67 -----------------AEHGLLLTAALPTDAGVYVCRARNAAGE-AYAAAAVTV 103 (107)
T ss_dssp -----------------TEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred -----------------ceEEEEEecCChhhCEEEEEEEEECCCE-EEEEEEEEE
Confidence 0224778888888888888888888875 566666666
No 65
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.79 E-value=1.6e-18 Score=115.38 Aligned_cols=128 Identities=22% Similarity=0.298 Sum_probs=93.7
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecC-CCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGF-PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
..+|.|.. +....+.+|+++.|.|.+.+. |.+.+.|++ ++..+....+..+ ......|.|.+++..|+|.|+|
T Consensus 5 ~~~P~~~~----~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C 78 (317)
T 2y25_A 5 FTGPHFVE----YLSWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVDEKHDF-KDGICTLLITEFSKKDAGIYEV 78 (317)
T ss_dssp SSCCEEEE----EEEEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECCSCC------CCEEEEETTCCSTTCSCEEE
T ss_pred cCCCcEee----eeeEEECCCCeEEEEEEEcCCCCCCEEEEEE-CCeEcCCCCcEEE-ECCeEEEEEccCCcccCeEEEE
Confidence 35788875 335789999999999999887 778999999 8887765443332 2333589999999999999999
Q ss_pred EEEec----------------------------------------------------CCccEEEEEEEec----------
Q psy15390 85 IATKI----------------------------------------------------GPLKIFWEIIFHM---------- 102 (142)
Q Consensus 85 ~~~~~----------------------------------------------------~~~~~~w~~~~~~---------- 102 (142)
.+.|. +.+.+.|.+....
T Consensus 79 ~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 158 (317)
T 2y25_A 79 ILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTG 158 (317)
T ss_dssp EEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEE
T ss_pred EEECCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEe
Confidence 99754 2457788753211
Q ss_pred --cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEE
Q psy15390 103 --HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVD 140 (142)
Q Consensus 103 --~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~ 140 (142)
.....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.
T Consensus 159 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~ 197 (317)
T 2y25_A 159 VTGEQIWLQINEPTPNDKGKYVMELFDGKTG-HQKTVDLS 197 (317)
T ss_dssp ECSSEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEEEC
T ss_pred ccCCEEEEEECcCCcccCeeEEEEEEeCCce-EEEEEEEe
Confidence 11234899999999999999999998875 45555543
No 66
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.79 E-value=3.8e-18 Score=120.89 Aligned_cols=131 Identities=21% Similarity=0.344 Sum_probs=98.2
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCe-eEEEecCCcce--ecCCcceEE----eeccceEEEeecCCCCC
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPE-IKWRREDNQPI--SINKRKKVH----MHYGEQLNITKISRTEM 79 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-~~w~~~~~~~~--~~~~~~~~~----~~~~~~l~i~~v~~~d~ 79 (142)
.+|.+.. .+....+.+|+++.|.|.+.+.|.+. +.|++ ++..+ .......+. ....+.|.|.++...|+
T Consensus 210 ~~p~i~~---~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 285 (524)
T 2ec8_A 210 AVPVVSV---SKASYLLREGEEFTVTCTIKDVSSSVYSTWKR-ENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDS 285 (524)
T ss_dssp SCCEEEC---SCSEEEEETTSCEEEEEEEEESSTTCEEEEEE-TTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTC
T ss_pred CCCcEEe---cCCcceEEcCCcEEEEEEEecCCCcEEEEEEe-CCCCCccccccccccccCCccceEEEEEECCCCHHHC
Confidence 5777776 66777899999999999999988876 99999 66662 222111111 22345799999999999
Q ss_pred eEEEEEEEec---------------------------------------------CCcc-EEEEEEEe----------cc
Q psy15390 80 GAYLCIATKI---------------------------------------------GPLK-IFWEIIFH----------MH 103 (142)
Q Consensus 80 G~y~C~~~~~---------------------------------------------~~~~-~~w~~~~~----------~~ 103 (142)
|.|.|.+.|. +.+. +.|.+... ..
T Consensus 286 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~ 365 (524)
T 2ec8_A 286 GVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKS 365 (524)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESC
T ss_pred EEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEE
Confidence 9999999864 3346 88864311 11
Q ss_pred -------ccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 104 -------YGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 104 -------~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 366 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 410 (524)
T 2ec8_A 366 ENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVN-AAIAFNVYVN 410 (524)
T ss_dssp CSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEEC
T ss_pred ccCCCceeEEEEEEeecCcccCeEEEEEEEecCce-EEEEEEEEEe
Confidence 1247999999999999999999999986 6777777764
No 67
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=1.1e-18 Score=117.10 Aligned_cols=132 Identities=20% Similarity=0.343 Sum_probs=95.8
Q ss_pred CCeeeecC-CCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcc-eEE-eeccceEEEeecCCCCCeEEEE
Q psy15390 8 PPNILDTE-STPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRK-KVH-MHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 8 ~p~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~-~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+|.+..+. .......+.+|+.+.|.|.+.+.|.+.+.|++ ++..+...... ... ......|.|.+++..|+|.|+|
T Consensus 119 ~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 197 (334)
T 1ry7_B 119 APYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 197 (334)
T ss_dssp CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCB-TTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEE
T ss_pred CCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEE-CCEECcccccccceecccceEEEEECCCCcccCEEEEE
Confidence 45554321 12234678899999999999999989999999 77776544321 111 1234579999999999999999
Q ss_pred EEEec-----------------------------------------------CCccEEEEEE----Eec-----------
Q psy15390 85 IATKI-----------------------------------------------GPLKIFWEII----FHM----------- 102 (142)
Q Consensus 85 ~~~~~-----------------------------------------------~~~~~~w~~~----~~~----------- 102 (142)
.+.|. +.+.+.|.+. ...
T Consensus 198 ~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 277 (334)
T 1ry7_B 198 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV 277 (334)
T ss_dssp EEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCC
T ss_pred EEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEE
Confidence 99864 2357888762 100
Q ss_pred cc----------cceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 103 HY----------GEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 103 ~~----------~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.. ...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 278 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V 325 (334)
T 1ry7_B 278 LKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGF-SHHSAWLVV 325 (334)
T ss_dssp CCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCC-EEEEEEEEE
T ss_pred eecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCe-EEEEEEEEE
Confidence 00 126999999999999999999999996 667777776
No 68
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=6.3e-18 Score=104.74 Aligned_cols=115 Identities=17% Similarity=0.249 Sum_probs=85.3
Q ss_pred eeEEecCCcEEEEEEEecCCCC--eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec--------
Q psy15390 20 SVAVREEFNITLTCKAEGFPAP--EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI-------- 89 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~-------- 89 (142)
...+.+|+++.|.|.+.+.+.+ .+.|++ ++..+...... .....|.|. +..|+|.|.|.+.|.
T Consensus 7 ~~~v~~G~~v~l~C~~~~~~~p~~~~~W~k-~~~~l~~~~~~----~~~~~l~i~--~~~d~G~Y~C~~~n~~~~~~~l~ 79 (184)
T 3b5h_A 7 TTVEDLGSKILLTCSLNDSATEVTGHRWLK-GGVVLKEDALP----GQKTEFKVD--SDDQWGEYSCVFLPEPMGTANIQ 79 (184)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCEEEEES-SSEEEECTTCC----CSEEEEEEC--GGGCCEEEEEEEESTTSCEEEEE
T ss_pred EEEEecCCCEEEEEECCCCCCCceEEEEEe-CCEEeeccccc----CCcEEEEEe--chhhCeEEEEEEECCcCcEEEEE
Confidence 3567889999999999887766 899999 88777544311 112245555 689999999998853
Q ss_pred -------------------------------C-CccEEEEE----EEe-cc-------------ccceEEEccCC-CCCC
Q psy15390 90 -------------------------------G-PLKIFWEI----IFH-MH-------------YGEQLNITKIS-RTEM 118 (142)
Q Consensus 90 -------------------------------~-~~~~~w~~----~~~-~~-------------~~~~l~i~~~~-~~d~ 118 (142)
+ .+.+.|.+ ... .. ....|.|.+++ .+|+
T Consensus 80 V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~ 159 (184)
T 3b5h_A 80 LHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADP 159 (184)
T ss_dssp ECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSS
T ss_pred EecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccC
Confidence 3 47889987 211 11 11379999999 8999
Q ss_pred eEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 119 GAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 119 g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
|.|+|.|.|..|. ....+.|.|+
T Consensus 160 G~Y~C~a~N~~g~-~~~~~~l~V~ 182 (184)
T 3b5h_A 160 GQYRCNGTSSKGS-DQAIITLRVR 182 (184)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEC
T ss_pred ceEEEEEEeCCCc-ceEEEEEEEe
Confidence 9999999999986 5667888774
No 69
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.79 E-value=1.8e-18 Score=123.07 Aligned_cols=123 Identities=16% Similarity=0.266 Sum_probs=91.9
Q ss_pred CCceeEEecCCcEEEEEEEe-cCCCCeeEEEecCCcceecCCcceE-E------eeccceEEEeecCCCCCeEEEEEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKV-H------MHYGEQLNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~-~------~~~~~~l~i~~v~~~d~G~y~C~~~~ 88 (142)
.+....+.+|+.+.|.|.+. +.|.+.+.|++ ++..+........ . ......|.|.+++..|+|.|+|.+.|
T Consensus 233 ~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N 311 (527)
T 3qs9_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL-ENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSK 311 (527)
T ss_dssp SCCEEEECTTSCEEEEEEEEESSSCCCEEEEC-SSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETT
T ss_pred CCCceEEeCCCeEEEEEEEccCCCCeEEEEEE-CCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEe
Confidence 45577889999999999996 88889999999 7776644321111 1 11234699999999999999999875
Q ss_pred c-----------------------------------------CCccEEEEEEEe--------ccccceEEEccCCCCCCe
Q psy15390 89 I-----------------------------------------GPLKIFWEIIFH--------MHYGEQLNITKISRTEMG 119 (142)
Q Consensus 89 ~-----------------------------------------~~~~~~w~~~~~--------~~~~~~l~i~~~~~~d~g 119 (142)
. +.+.+.|.+... ......|.|.+++.+|+|
T Consensus 312 ~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G 391 (527)
T 3qs9_E 312 HPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPG 391 (527)
T ss_dssp EEEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCS
T ss_pred CCCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCE
Confidence 2 446789975311 112457999999999999
Q ss_pred EEEEEEecCCCCCeeeEEEEEE
Q psy15390 120 AYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 120 ~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.|+|.|.|..|. .+..+.|.|
T Consensus 392 ~YtC~A~N~~g~-~~~~~~L~V 412 (527)
T 3qs9_E 392 EYIFHAENDDAQ-FTKMFTLNI 412 (527)
T ss_dssp CEEEEEEETTEE-EEEEEEEC-
T ss_pred EEEEEEEeCCCc-EEEEEEEEE
Confidence 999999999886 566677665
No 70
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.79 E-value=7.7e-18 Score=110.96 Aligned_cols=131 Identities=23% Similarity=0.291 Sum_probs=95.7
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y~C~ 85 (142)
.+|.+.. .+....+.+|+.+.|.|.+.+.|. .+.|++.+|..+....+..+.... ...|.|.+++..|+|.|+|.
T Consensus 3 ~~p~v~~---~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 78 (291)
T 2wim_A 3 ALLQVTI---SLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQ 78 (291)
T ss_dssp CCCEEEE---SCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCceEEE---eccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEE
Confidence 4678877 788889999999999999998775 899998667666544333322221 24799999999999999999
Q ss_pred EEec-------------------------------------------CCccEEEEEEE-----------eccccceEEEc
Q psy15390 86 ATKI-------------------------------------------GPLKIFWEIIF-----------HMHYGEQLNIT 111 (142)
Q Consensus 86 ~~~~-------------------------------------------~~~~~~w~~~~-----------~~~~~~~l~i~ 111 (142)
+.+. +.+.+.|.+.. .....+.|.|.
T Consensus 79 ~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~ 158 (291)
T 2wim_A 79 ATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQIL 158 (291)
T ss_dssp EECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEET
T ss_pred EecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEE
Confidence 9764 23578886432 11235579999
Q ss_pred cCCCCCCeEEEEEEecCCCCC-eeeEEEEEE
Q psy15390 112 KISRTEMGAYLCIATNNVPPS-VSKRITVDV 141 (142)
Q Consensus 112 ~~~~~d~g~y~C~a~n~~~~~-~s~~~~l~V 141 (142)
+++.+|+|.|+|.|.|..+.. .+..+.|.|
T Consensus 159 ~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v 189 (291)
T 2wim_A 159 NINKSDEGIYRCEGRVEARGEIDFRDIIVIV 189 (291)
T ss_dssp TCCGGGCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred ecchhhCEEEEEEEEECCCCeeEEeeEEEEe
Confidence 999999999999999887542 233444443
No 71
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.79 E-value=4.6e-19 Score=120.11 Aligned_cols=130 Identities=15% Similarity=0.133 Sum_probs=97.2
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCe-EEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMG-AYLCI 85 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~y~C~ 85 (142)
.+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+..... .......+.|.|.++...|+| .|+|.
T Consensus 157 ~~P~i~~---~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~-~~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~~Y~C~ 231 (347)
T 2ifg_A 157 GVPTLKV---QVPNASVDVGDDVLLRCQVEGRGLEQAGWIL-TELEQSATVM-KSGGLPSLGLTLANVTSDLNRKNVTCW 231 (347)
T ss_dssp CCCEEEE---ECCSSCCBTTCCEEEEEEEECSSCCCCCEEE-SCCCSSEEEC-CCCCSSEEEEEEESCCSTTTTCCEEEC
T ss_pred CCCceec---cCCceEEeCCCcEEEEEEEecCCCCEEEEEc-CCceeecccc-cceecccceEEEeeCChHHCCCeEEEE
Confidence 4677776 5677788999999999999999999999999 5544321111 111234457999999999999 99998
Q ss_pred EEec--------------------------------------CCccEEEEEEEec-------------------cccceE
Q psy15390 86 ATKI--------------------------------------GPLKIFWEIIFHM-------------------HYGEQL 108 (142)
Q Consensus 86 ~~~~--------------------------------------~~~~~~w~~~~~~-------------------~~~~~l 108 (142)
+.|. +.+.+.|.+.... ...+.|
T Consensus 232 a~n~~g~~~~~~~l~V~~~P~i~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L 311 (347)
T 2ifg_A 232 AENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCL 311 (347)
T ss_dssp CEETTEECCEEECCCCBEEEEEEECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEE
T ss_pred EEcCCCCEEEEEEEEEcCCCeeeeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEE
Confidence 7653 4467888642110 114459
Q ss_pred EEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 109 NITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 109 ~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.|..++.+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 312 ~I~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~ 344 (347)
T 2ifg_A 312 RLNQPTHVNNGNYTLLAANPFGQ-ASASIMAAFM 344 (347)
T ss_dssp EESSCCGGGCEEEEEEEEETTEE-EEEEEEECSC
T ss_pred EECCCCcccCceEEEEEecCCCc-eeeEEEEEec
Confidence 99999999999999999999986 6777777663
No 72
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.79 E-value=7.4e-19 Score=110.90 Aligned_cols=124 Identities=20% Similarity=0.362 Sum_probs=89.6
Q ss_pred CCceeEEecCCcEEEEEEEecCC----CCeeEEEecC---------------Ccceec---CCcceEEee------ccce
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP----APEIKWRRED---------------NQPISI---NKRKKVHMH------YGEQ 68 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~----~~~~~w~~~~---------------~~~~~~---~~~~~~~~~------~~~~ 68 (142)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|++.+ +..... ....+.... .+.+
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 44567889999999999998866 4589998731 111110 011222222 2357
Q ss_pred EEEeecCCCCCeEEEEEEEec-------------------------------------------CCccEEEEEEE-----
Q psy15390 69 LNITKISRTEMGAYLCIATKI-------------------------------------------GPLKIFWEIIF----- 100 (142)
Q Consensus 69 l~i~~v~~~d~G~y~C~~~~~-------------------------------------------~~~~~~w~~~~----- 100 (142)
|.|.+++.+|+|.|.|.+.+. +.+.+.|.+..
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~ 165 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTM 165 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCC
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCcc
Confidence 999999999999999999864 34578887631
Q ss_pred -----eccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 101 -----HMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 101 -----~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.....+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 166 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V 210 (214)
T 3jz7_A 166 PTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGS-DQCMLRLDV 210 (214)
T ss_dssp CGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEECC
T ss_pred CccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCc-EEEEEEEEE
Confidence 1123568999999999999999999999986 577777766
No 73
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.79 E-value=2e-19 Score=111.34 Aligned_cols=119 Identities=16% Similarity=0.144 Sum_probs=81.7
Q ss_pred eeEEecCCcEEEEEEEec--CCCCeeEEEecCCcceec--------CCcceEEeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 20 SVAVREEFNITLTCKAEG--FPAPEIKWRREDNQPISI--------NKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~--~~~~~~~w~~~~~~~~~~--------~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
.+.+.+|++++|.|...+ .+.+.+.|++ ++..+.. ....+.....+++|.|.+++.+|+|.|.|.+.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k-~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWER-GSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEE-TTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEET
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEe-CCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeC
Confidence 467889999999995333 4456899999 6654320 1123333445667999999999999999998864
Q ss_pred ---------------------------------------CCccEEEEEEEe-ccccceEEEccCCCCCCeEEEEEEecCC
Q psy15390 90 ---------------------------------------GPLKIFWEIIFH-MHYGEQLNITKISRTEMGAYLCIATNNV 129 (142)
Q Consensus 90 ---------------------------------------~~~~~~w~~~~~-~~~~~~l~i~~~~~~d~g~y~C~a~n~~ 129 (142)
+++.+.|.+... +.....+.|..+..+|+|.|+|.|.|..
T Consensus 84 ~g~~~~~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~~~~~~d~G~Y~C~a~N~~ 163 (176)
T 1hng_A 84 NGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRV 163 (176)
T ss_dssp TCCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEEEEEEETT
T ss_pred CCCEEEEEEEEEEEeCCCCCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEEEEEccCCeEEEEEEEecC
Confidence 335677765321 1112235566788999999999999999
Q ss_pred CCCeeeEEEEE
Q psy15390 130 PPSVSKRITVD 140 (142)
Q Consensus 130 ~~~~s~~~~l~ 140 (142)
|. .+....|.
T Consensus 164 g~-~~~~~~l~ 173 (176)
T 1hng_A 164 SQ-ESEMEVVN 173 (176)
T ss_dssp EE-EEEEECCC
T ss_pred CC-ceeccccc
Confidence 86 44444443
No 74
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.79 E-value=1.8e-18 Score=109.21 Aligned_cols=115 Identities=17% Similarity=0.216 Sum_probs=85.5
Q ss_pred cCCcEEEEEEEecC-CCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEEEEEec-------------
Q psy15390 25 EEFNITLTCKAEGF-PAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLCIATKI------------- 89 (142)
Q Consensus 25 ~g~~v~l~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C~~~~~------------- 89 (142)
.++.+.|.|.+.+. |.+.+.|++ ++..+....+..+....+ ..|.|.+++..|+|.|+|.+.|.
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~-~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSH-NGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEE-TTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred cCceEEEEEEEeccCCCceEEEEE-CCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 57888888988774 577999999 888876654444333322 35999999999999999997652
Q ss_pred --------------------------------------------------CCccEEEEEEEec-------------cccc
Q psy15390 90 --------------------------------------------------GPLKIFWEIIFHM-------------HYGE 106 (142)
Q Consensus 90 --------------------------------------------------~~~~~~w~~~~~~-------------~~~~ 106 (142)
+.+.+.|.+.... ....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 3356888642110 1123
Q ss_pred eEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 107 QLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 107 ~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~-~~~~~~l~V 208 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGS-ETSDFTVSV 208 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCc-EEEEEEEEE
Confidence 7999999999999999999999986 567777765
No 75
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=1.1e-18 Score=113.08 Aligned_cols=130 Identities=16% Similarity=0.184 Sum_probs=89.8
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
..+|.+.. .+.. .+.+|++|+|.|.+.+ +...+.|++ ++..+............+..|.|.+++..|+|.|+|.
T Consensus 5 ~~kP~i~~---~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 78 (242)
T 1p6f_A 5 LPKPFIWA---EPHF-MVPKEKQVTICCQGNY-GAVEYQLHF-EGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCI 78 (242)
T ss_dssp CCCCEEEE---ESCS-EEETTCCEEEEEECCT-TCCEEEEEE-TTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEe---eCCC-ccCCCCcEEEEEeeCC-CCcEEEEEE-CCCccccccccccCCcceeEEEecCCCcccCeEEEEE
Confidence 45777776 5555 7889999999999864 445789999 7776532110000112345799999999999999999
Q ss_pred EEec---------------------------------------------CCccEEEEEEE--------eccccceEEEcc
Q psy15390 86 ATKI---------------------------------------------GPLKIFWEIIF--------HMHYGEQLNITK 112 (142)
Q Consensus 86 ~~~~---------------------------------------------~~~~~~w~~~~--------~~~~~~~l~i~~ 112 (142)
+.+. +.+.+.|.+.. .......|.|.+
T Consensus 79 ~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~ 158 (242)
T 1p6f_A 79 YRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGP 158 (242)
T ss_dssp EEETTEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCSEEEEEECSSSCEEEEEECSSEEEEEEEE
T ss_pred EecCCccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCCCCCEEEEEECCCccCccccCCCceEEEEeCC
Confidence 8642 11245565421 122346799999
Q ss_pred CCCCCCeEEEEEEecCC--CCCeeeEEEEEE
Q psy15390 113 ISRTEMGAYLCIATNNV--PPSVSKRITVDV 141 (142)
Q Consensus 113 ~~~~d~g~y~C~a~n~~--~~~~s~~~~l~V 141 (142)
++.+|+|.|+|.|.|.. ....|..+.|.|
T Consensus 159 v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V 189 (242)
T 1p6f_A 159 VTTAHRGTYRCFGSYNNHAWSFPSEPVKLLV 189 (242)
T ss_dssp CCGGGCEEEEEEEEEETTEECCCCCCEEEEE
T ss_pred CccccCEEEEEEEECCCCcccCCCCCEEEEE
Confidence 99999999999999853 234567777766
No 76
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.79 E-value=3.8e-18 Score=116.58 Aligned_cols=120 Identities=21% Similarity=0.398 Sum_probs=91.8
Q ss_pred ceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceec----CCcceEEeeccceEEEeecCCCCCeEEEEEEEec-----
Q psy15390 19 SSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI----NKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI----- 89 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~----~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~----- 89 (142)
....+.+|+.+.|.|.+.+.|.+.+.|++ ++..... ....+. ...++.|.|.+++..|+|.|.|.+.|.
T Consensus 220 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 297 (388)
T 2v5m_A 220 KPLELMVAHTISLLCPAQGFPAPSFRWYK-FIEGTTRKQAVVLNDRV-KQVSGTLIIKDAVVEDSGKYLCVVNNSVGGES 297 (388)
T ss_dssp CCEEEETTSCEEECCCCEEESCCEEEEEE-ECTTSSCEEECCCSSSE-EEETTEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CceEEeeCCcEEEEEECCCCCCCEEEEEe-cCCCCcccccccccCce-ecccCEEEECcCCHHHCeEEEEEEecCCCcee
Confidence 44567889999999999998999999999 4332211 011121 223568999999999999999999875
Q ss_pred -------------------------------------CCccEEEEEEEe--ccccceEEEccCCCCCCeEEEEEEecCCC
Q psy15390 90 -------------------------------------GPLKIFWEIIFH--MHYGEQLNITKISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 90 -------------------------------------~~~~~~w~~~~~--~~~~~~l~i~~~~~~d~g~y~C~a~n~~~ 130 (142)
+.+.+.|.+... ....+.|.|..+..+|+|.|+|.|.|..|
T Consensus 298 ~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 377 (388)
T 2v5m_A 298 VETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRE 377 (388)
T ss_dssp EEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSC
T ss_pred EEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccCCCEEEEecCChhhCEEEEEEEEcCCC
Confidence 446788876422 23457899999999999999999999999
Q ss_pred CCeeeEEEEEE
Q psy15390 131 PSVSKRITVDV 141 (142)
Q Consensus 131 ~~~s~~~~l~V 141 (142)
. .+..+.|.|
T Consensus 378 ~-~~~~~~l~V 387 (388)
T 2v5m_A 378 S-AEASAELKL 387 (388)
T ss_dssp E-EEEEEEEEE
T ss_pred c-EEEEEEEEe
Confidence 6 677888876
No 77
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.78 E-value=1.5e-18 Score=118.96 Aligned_cols=119 Identities=29% Similarity=0.585 Sum_probs=87.1
Q ss_pred CCeeeecCCCCceeEE---ecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeec-CCCCCeEEE
Q psy15390 8 PPNILDTESTPSSVAV---REEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKI-SRTEMGAYL 83 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~---~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v-~~~d~G~y~ 83 (142)
+|.|.. .|....+ .+|+.+.|.|.+.|.|.+.+.|++ +|..+......++.. .++.|.|.++ +..|+|.|+
T Consensus 5 ~P~f~~---~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k-~g~~l~~~~~~~~~~-~~g~l~i~~~~~~~D~G~Y~ 79 (384)
T 3kld_A 5 GPVFVQ---EPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKL-NGTDVDIGMDFRYSV-VDGSLLINNPNKTQDAGTYQ 79 (384)
T ss_dssp EEEEEE---CCCCEEEETTCSCSEEEECCEEEEESCCEEEEEE-TTEECCC----CEEE-ETTEEEEESCCHHHHCEEEE
T ss_pred CCEEEe---CCcceEeecCCCCCeEEEEeEecCCCCCEEEEEE-CCEECcCCCCccEEE-ECCEEEEcCCCCcccCEEEE
Confidence 567776 6666555 579999999999999999999999 888876544334333 3456777776 779999999
Q ss_pred EEEEec---------------------------------------------CCccEEEEEE----------EeccccceE
Q psy15390 84 CIATKI---------------------------------------------GPLKIFWEII----------FHMHYGEQL 108 (142)
Q Consensus 84 C~~~~~---------------------------------------------~~~~~~w~~~----------~~~~~~~~l 108 (142)
|.+.|. +.+.+.|.+. +.....+.|
T Consensus 80 C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L 159 (384)
T 3kld_A 80 CIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNL 159 (384)
T ss_dssp EEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCE
T ss_pred EEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcE
Confidence 999875 1134667532 122234679
Q ss_pred EEccCCCCCCeEEEEEEecCCCC
Q psy15390 109 NITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 109 ~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
.|.++..+|+|.|+|.|.|..+.
T Consensus 160 ~I~~v~~~D~G~Y~C~a~n~~~~ 182 (384)
T 3kld_A 160 YIAKVEKSDVGNYTCVVTNTVTN 182 (384)
T ss_dssp EESSCCGGGCEEEEEEEEETTTT
T ss_pred EEeecCHHHCceEEEEEeccccc
Confidence 99999999999999999998764
No 78
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.78 E-value=4.2e-18 Score=113.16 Aligned_cols=121 Identities=17% Similarity=0.169 Sum_probs=91.8
Q ss_pred eeEEecCCcEEEEEEEe-cCCCCeeEEEecCCcceecCCcceEEeec-c--ceEEEeecCCCCCeEEEEEEEec------
Q psy15390 20 SVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVHMHY-G--EQLNITKISRTEMGAYLCIATKI------ 89 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~--~~l~i~~v~~~d~G~y~C~~~~~------ 89 (142)
...+.+|+.+.|.|.+. +.|.+.+.|++ ++..+....+..+.... . ..|.|.+++..|+|.|.|.+.+.
T Consensus 116 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 194 (312)
T 2y23_A 116 AVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHS 194 (312)
T ss_dssp EEEECSSSCEEEEEEESCCCSSCEEEEEE-TTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEE
T ss_pred ceEEeeCCCEEEEEEEEeCCCCCEEEEEE-CCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEE
Confidence 67889999999999998 78889999999 88887665444433221 2 24999999999999999965421
Q ss_pred ------------------------------------------------------CCc-cEEEEEEEe----------ccc
Q psy15390 90 ------------------------------------------------------GPL-KIFWEIIFH----------MHY 104 (142)
Q Consensus 90 ------------------------------------------------------~~~-~~~w~~~~~----------~~~ 104 (142)
+++ .+.|.+... ...
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~ 274 (312)
T 2y23_A 195 TVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDG 274 (312)
T ss_dssp EEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC----C
T ss_pred EEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECC
Confidence 234 788864211 112
Q ss_pred cceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 105 GEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 105 ~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 275 ~~~L~I~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~i~ 311 (312)
T 2y23_A 275 ICTLLITEFSKKDAGIYEVILKDDRGK-DKSRLKLVDE 311 (312)
T ss_dssp EEEEEECSCSGGGCEEEEEEEESTTCC-EEEEEEECSC
T ss_pred EEEEEECcCCHHHCEEEEEEEEcCCCc-eeeeeEEEec
Confidence 358999999999999999999999996 6777777664
No 79
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.78 E-value=1.5e-18 Score=115.68 Aligned_cols=118 Identities=18% Similarity=0.273 Sum_probs=90.6
Q ss_pred eEEecCCcEEEEEEE------ecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE-ec----
Q psy15390 21 VAVREEFNITLTCKA------EGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT-KI---- 89 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~------~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~-~~---- 89 (142)
..+.+|+++.|.|.+ .+.|.+.+.|++ ++..+..... +. ...++.|.|.+++..|+|.|+|.+. |.
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k-~~~~l~~~~~-~~-~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYK-DCKPLLLDNI-HF-SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEE-TTEECCCCSS-SE-EEETTEEEESSCCGGGCEEEEEEEEEEETTEE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEE-CCEECCCccc-eE-eecCceEEEEeceehhCcEEEEEEEcCCCCcE
Confidence 567889999999998 778888999999 8887754322 22 3345689999999999999999998 32
Q ss_pred -----------------------------------------------CCccEEEEEEEecc-------------------
Q psy15390 90 -----------------------------------------------GPLKIFWEIIFHMH------------------- 103 (142)
Q Consensus 90 -----------------------------------------------~~~~~~w~~~~~~~------------------- 103 (142)
+.+.+.|.+.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~ 269 (315)
T 1itb_B 190 YPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPAN 269 (315)
T ss_dssp EEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSC
T ss_pred EEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCC
Confidence 23467786521110
Q ss_pred -----ccceEEEccCCCCC-CeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 104 -----YGEQLNITKISRTE-MGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 104 -----~~~~l~i~~~~~~d-~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
....|.|.+++.+| +|.|+|.|.|..|. .+..+.|.|+
T Consensus 270 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~-~~~~~~l~v~ 313 (315)
T 1itb_B 270 KRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI-DAAYIQLIYP 313 (315)
T ss_dssp GGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCC-EEEEEEEECC
T ss_pred CceeEEEEEEEEeecCHHHcCCceEEEEecCCCc-eeEEEEEEec
Confidence 12379999999999 99999999999996 6777877764
No 80
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.78 E-value=1.5e-17 Score=106.27 Aligned_cols=123 Identities=13% Similarity=0.159 Sum_probs=78.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCCC---eeEEEecCCccee-----------c----CCcceEEee------ccceEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAP---EIKWRREDNQPIS-----------I----NKRKKVHMH------YGEQLNIT 72 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~---~~~w~~~~~~~~~-----------~----~~~~~~~~~------~~~~l~i~ 72 (142)
..+++.+.+|++++|.|.+.+.+.+ .+.|++ ++.... . ....+.... .+..|.|.
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k-~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 88 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVS-SSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIH 88 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEE-TTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEES
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEE-CCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEe
Confidence 3456788999999999999875544 689998 443210 0 001111111 12469999
Q ss_pred ecCCCCCeEEEEEEEec-----------------------------------------CCccEEEEEEE-----------
Q psy15390 73 KISRTEMGAYLCIATKI-----------------------------------------GPLKIFWEIIF----------- 100 (142)
Q Consensus 73 ~v~~~d~G~y~C~~~~~-----------------------------------------~~~~~~w~~~~----------- 100 (142)
+++..|+|.|.|.+.|. +.+.+.|.+..
T Consensus 89 ~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~ 168 (226)
T 4f80_A 89 NVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPV 168 (226)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCC
T ss_pred eCchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEE
Confidence 99999999999999875 45688996411
Q ss_pred eccccc---eEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 101 HMHYGE---QLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 101 ~~~~~~---~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.....+ .+.+..++.+|+|+|+|.|.|..|. ....+.|.|
T Consensus 169 ~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~-~~~~~~v~v 211 (226)
T 4f80_A 169 VADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLG-LEKTASISI 211 (226)
T ss_dssp EECTTSCEEEEEEEEECC----CEEEEEEETTTT-EEEEEEECC
T ss_pred EECCCCcEEEEEEEEechhcCcEEEEEEEeCCCC-eEEEEEEEE
Confidence 111122 2334467889999999999999986 566666655
No 81
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.77 E-value=2.8e-18 Score=111.97 Aligned_cols=124 Identities=14% Similarity=0.287 Sum_probs=88.0
Q ss_pred CCceeEEecCCcEEEEEEEe---cCCCCeeEEEecCCcceec---------------CCcceEEe-----eccceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAE---GFPAPEIKWRREDNQPISI---------------NKRKKVHM-----HYGEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~---~~~~~~~~w~~~~~~~~~~---------------~~~~~~~~-----~~~~~l~i~~ 73 (142)
.+..+.+.+|+++.|.|.+. +.+.+.+.|++.++..... ....+... ..+..|.|.+
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 90 (268)
T 3mj6_A 11 SSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQD 90 (268)
T ss_dssp -CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECS
T ss_pred CCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECC
Confidence 56678899999999999987 5666689999933211100 00112221 1225799999
Q ss_pred cCCCCCeEEEEEEEec------------------------------------------CCccEEEEEEEe----------
Q psy15390 74 ISRTEMGAYLCIATKI------------------------------------------GPLKIFWEIIFH---------- 101 (142)
Q Consensus 74 v~~~d~G~y~C~~~~~------------------------------------------~~~~~~w~~~~~---------- 101 (142)
++.+|+|.|.|.+.+. +.+.+.|.+...
T Consensus 91 v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 170 (268)
T 3mj6_A 91 VQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLS 170 (268)
T ss_dssp CCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEE
T ss_pred CCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEE
Confidence 9999999999999754 235788976310
Q ss_pred --------------------------ccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 102 --------------------------MHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 102 --------------------------~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
......|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|
T Consensus 171 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V 235 (268)
T 3mj6_A 171 YDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLE-SRKTIVLHV 235 (268)
T ss_dssp EETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred ecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCce-EEEEEEEEE
Confidence 023567999999999999999999998775 667777766
No 82
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.77 E-value=6.4e-19 Score=111.45 Aligned_cols=109 Identities=19% Similarity=0.374 Sum_probs=83.6
Q ss_pred ecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec--------------
Q psy15390 24 REEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI-------------- 89 (142)
Q Consensus 24 ~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~-------------- 89 (142)
.+|++++|.|.+ |.+.+.|++ +|..+... ...++.|.|.+++..|+|.|+|.+.+.
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k-~g~~l~~~------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~~~~ 85 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFK-DGKMIGFL------TEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSA 85 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEE-TTEEEEEE------ESSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC---
T ss_pred cCCCeEEEEEcC---CCCEEEEEE-CCEECCCC------CCCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEEecc
Confidence 579999999987 677999999 88776421 123467999999999999999985321
Q ss_pred -----------------------------------------------------CCccEEEEEEEe---c--------ccc
Q psy15390 90 -----------------------------------------------------GPLKIFWEIIFH---M--------HYG 105 (142)
Q Consensus 90 -----------------------------------------------------~~~~~~w~~~~~---~--------~~~ 105 (142)
+.+.+.|.+... . ...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~g~p~p~i~W~k~~~~l~~~~~~~~~~~~~ 165 (204)
T 1sy6_A 86 DDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDE 165 (204)
T ss_dssp ---------------------------------CCCCEEEEETTEEEEECSCCCSSCEEEEETTEEESCCTTCTTEEEET
T ss_pred ccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcCCCCCCceEEEECCEECCCccCCceEecCC
Confidence 224577764211 0 135
Q ss_pred ceEEEccC-CCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 106 EQLNITKI-SRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 106 ~~l~i~~~-~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
+.|.|.++ +.+|+|.|+|.|.|..|...+..+.|.|+
T Consensus 166 ~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 166 DHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp TEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred CEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 67999999 99999999999999999767888888774
No 83
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.77 E-value=1.7e-18 Score=116.59 Aligned_cols=130 Identities=14% Similarity=0.220 Sum_probs=96.9
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEe-------cCCCCeeEEEecCCcce--ecCCcceEEeeccceEEEeecCCC
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAE-------GFPAPEIKWRREDNQPI--SINKRKKVHMHYGEQLNITKISRT 77 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~-------~~~~~~~~w~~~~~~~~--~~~~~~~~~~~~~~~l~i~~v~~~ 77 (142)
..|.+.. .+....+.+|+++.|.|.+. +.|.+.+.|++ ++..+ ......++. ..++.|.|.+++..
T Consensus 17 ~~p~~~~---~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~ 91 (339)
T 3o4o_C 17 SCRFRGR---HYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHK-NDSARTVPGEEETRMW-AQDGALWLLPALQE 91 (339)
T ss_dssp -CEEEEE---CSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEE-SSCCSCCSCCSSSCEE-EETTEEEESSBCTT
T ss_pred hhHhhCc---CceEEEEECCccEEEEeccccccccccCCCCceEEEEE-CCCCcccCccccccEE-eeCCeEEECCCCcc
Confidence 4577777 77888999999999999997 78888999999 76663 222233432 45668999999999
Q ss_pred CCeEEEEEEEec-------------------------------------------------CCccEEEEEEEec------
Q psy15390 78 EMGAYLCIATKI-------------------------------------------------GPLKIFWEIIFHM------ 102 (142)
Q Consensus 78 d~G~y~C~~~~~-------------------------------------------------~~~~~~w~~~~~~------ 102 (142)
|+|.|.|.+.|. +.+.+.|.+....
T Consensus 92 D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~ 171 (339)
T 3o4o_C 92 DSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNE 171 (339)
T ss_dssp CCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCS
T ss_pred cCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCc
Confidence 999999998864 1345777653211
Q ss_pred -----cccceEEEccCCCCCCeEEEEEEecCCCC---CeeeEEEEEE
Q psy15390 103 -----HYGEQLNITKISRTEMGAYLCIATNNVPP---SVSKRITVDV 141 (142)
Q Consensus 103 -----~~~~~l~i~~~~~~d~g~y~C~a~n~~~~---~~s~~~~l~V 141 (142)
...+.|.|..++.+|+|.|+|.|.|..+. ..+..+.|.|
T Consensus 172 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V 218 (339)
T 3o4o_C 172 KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRI 218 (339)
T ss_dssp SEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEE
T ss_pred eeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEE
Confidence 12247999999999999999999998764 2455566655
No 84
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.77 E-value=1.1e-17 Score=105.26 Aligned_cols=129 Identities=15% Similarity=0.221 Sum_probs=86.4
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCc-ceEE-eeccceEEEeecCCCCCeEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKR-KKVH-MHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~-~~~~~~l~i~~v~~~d~G~y~ 83 (142)
..+|.+.. .+. ..+.+|++++|.|.+. .+.+.+.|++ +|..+..... .+.. ...+..|.|.+++..|+|.|+
T Consensus 6 ~~~P~i~~---~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~ 79 (201)
T 1nkr_A 6 HRKPSLLA---HPG-PLVKSEETVILQCWSD-VMFEHFLLHR-EGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYR 79 (201)
T ss_dssp -CCCEEEE---ESC-SEEETTCCEEEEEEES-SCCSEEEEEE-ESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEE
T ss_pred CCCCeEEE---EcC-CccCCCCcEEEEEecc-CCCCEEEEEE-CCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEE
Confidence 34677765 444 5688999999999986 4667899999 7765532111 0000 123457999999999999999
Q ss_pred EEEEec------------------------------------------------CCccEEEEEEEec-----------c-
Q psy15390 84 CIATKI------------------------------------------------GPLKIFWEIIFHM-----------H- 103 (142)
Q Consensus 84 C~~~~~------------------------------------------------~~~~~~w~~~~~~-----------~- 103 (142)
|.+.+. +.+.+.|.+.... .
T Consensus 80 C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~ 159 (201)
T 1nkr_A 80 CYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNG 159 (201)
T ss_dssp EEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESSCCSEEEEEETTCSSCEEEECEEEETT
T ss_pred EeEecCCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCCCCceEEEEECCcccCcccccccccCC
Confidence 998531 1134566542110 0
Q ss_pred -ccceEEEccCCCCCCeEEEEEEecCCC----CCeeeEEEEEEC
Q psy15390 104 -YGEQLNITKISRTEMGAYLCIATNNVP----PSVSKRITVDVE 142 (142)
Q Consensus 104 -~~~~l~i~~~~~~d~g~y~C~a~n~~~----~~~s~~~~l~V~ 142 (142)
....|.|.+++ |+|.|+|.|.+... ...|..+.|.|.
T Consensus 160 ~~~~~L~i~~v~--d~G~Y~C~a~~~~~~~~~s~~S~~~~l~V~ 201 (201)
T 1nkr_A 160 TFQADFPLGPAT--HGGTYRCFGSFHDSPYEWSKSSDPLLVSVT 201 (201)
T ss_dssp EEEEEEEEEECC--SCEEEEEEEEETTEEEEECCCCCCEEEEEC
T ss_pred ceEEEEEeCCcC--CCeeEEEEEEcCCCCCcCCCCCCCEEEEeC
Confidence 14568898888 99999999996532 234677888773
No 85
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.77 E-value=2.3e-18 Score=115.73 Aligned_cols=117 Identities=22% Similarity=0.297 Sum_probs=89.7
Q ss_pred EEecCCcEEEEEEEecCC-CCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec-----------
Q psy15390 22 AVREEFNITLTCKAEGFP-APEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI----------- 89 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~----------- 89 (142)
.+.+|+.+.|.|.+.+.| .+.+.|++ ++..+..... ++... ++.|.|.+++.+|+|.|+|.+.|.
T Consensus 139 ~~~~G~~v~L~C~~~g~p~~~~i~W~k-~~~~l~~~~~-~~~~~-~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s 215 (329)
T 3oq3_B 139 GTHDKYGIDLYCGILYAKHYNNITWYK-NNQELIIDGT-KYSQS-GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVS 215 (329)
T ss_dssp TSSTTTCEEEECCCCSCCCCCEEEEEE-TTEECCCSSS-SEEEE-TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEE
T ss_pred EEeCCCcEEEEeccCCCCCCceEEEEE-CCccCCCCCc-eEecC-CCEEEEeecChhhCEEEEEEEEecccCCCceeEEE
Confidence 456799999999999988 88999999 8877743322 22222 678999999999999999999852
Q ss_pred ----------------------------------------C---Cc-cEEEEEEEec-----------------cccceE
Q psy15390 90 ----------------------------------------G---PL-KIFWEIIFHM-----------------HYGEQL 108 (142)
Q Consensus 90 ----------------------------------------~---~~-~~~w~~~~~~-----------------~~~~~l 108 (142)
+ .+ .+.|.+.... .....|
T Consensus 216 ~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L 295 (329)
T 3oq3_B 216 RCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATL 295 (329)
T ss_dssp EEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEE
T ss_pred eeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEE
Confidence 2 23 5678642111 024569
Q ss_pred EEccCCCCCCe-EEEEEEecCCCCCeeeEEEEEEC
Q psy15390 109 NITKISRTEMG-AYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 109 ~i~~~~~~d~g-~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.|.+++.+|+| .|+|.|.|..|. .+..+.|.||
T Consensus 296 ~I~~v~~~D~G~~Y~C~a~N~~G~-~~~~~~l~v~ 329 (329)
T 3oq3_B 296 YFENVTEEYIGNTYTCRGHNYYFD-KTLTTTVVLE 329 (329)
T ss_dssp EESSCCGGGTTCEEEEEEECSSCE-EEEEEEEEEC
T ss_pred EEEeccHHHCCCcEEEEEEecCCc-eEEEEEEEeC
Confidence 99999999999 999999999996 6777888875
No 86
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.76 E-value=8e-18 Score=114.83 Aligned_cols=119 Identities=23% Similarity=0.474 Sum_probs=92.4
Q ss_pred CCCeeeecCCCCceeEE---ecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCC-CCCeEE
Q psy15390 7 VPPNILDTESTPSSVAV---REEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR-TEMGAY 82 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~---~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~-~d~G~y 82 (142)
.+|.|.. .|....+ .+|+.+.|.|.+.+.|.+.+.|++ +|..+......++.. .++.|.|.++.. .|+|.|
T Consensus 3 ~~P~~~~---~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k-~g~~~~~~~~~~~~~-~~~~L~i~~~~~~~D~G~Y 77 (382)
T 1cs6_A 3 YGPVFEE---QPAHTLFPEGSAEEKVTLTCRARANPPATYRWKM-NGTELKMGPDSRYRL-VAGDLVISNPVKAKDAGSY 77 (382)
T ss_dssp EEEEEEE---CCCCEEEETTCSCCEEEECCEEEEESCCEEEEEE-TTEECCCSTTSSEEE-ETTEEEEESCCHHHHCEEE
T ss_pred CCCEEEE---CCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEE-CCEECCcCCCccEEe-eCCeEEEecccccccCEEE
Confidence 4788887 6776665 689999999999998889999999 888876544444333 356899999997 999999
Q ss_pred EEEEEec---------------------------------------------CCccEEEEEEE------------ecccc
Q psy15390 83 LCIATKI---------------------------------------------GPLKIFWEIIF------------HMHYG 105 (142)
Q Consensus 83 ~C~~~~~---------------------------------------------~~~~~~w~~~~------------~~~~~ 105 (142)
+|.+.|. +.+.+.|.+.. .....
T Consensus 78 ~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~ 157 (382)
T 1cs6_A 78 QCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTT 157 (382)
T ss_dssp EEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTT
T ss_pred EEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCc
Confidence 9999864 22467786531 11234
Q ss_pred ceEEEccCCCCCCeEEEEEEecCCC
Q psy15390 106 EQLNITKISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 106 ~~l~i~~~~~~d~g~y~C~a~n~~~ 130 (142)
+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 158 ~~L~i~~~~~~d~G~Y~C~~~n~~g 182 (382)
T 1cs6_A 158 GNLYIAKTEASDLGNYSCFATSHID 182 (382)
T ss_dssp CCEEESSCCGGGCEEEEEEEEEEET
T ss_pred eEEEEEeeCcccCeeEEEEEEEccc
Confidence 6799999999999999999998764
No 87
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.76 E-value=6e-18 Score=120.44 Aligned_cols=131 Identities=10% Similarity=0.137 Sum_probs=90.1
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.... ......+.+|+.+.|.|.+.+.|.+.+.|++ +|+.+...... ...+..|.|.+++..|+|.|+|
T Consensus 321 V~~~p~i~~~~-~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~g~~l~~~~~~---~~~~~~L~I~~v~~~D~G~YtC 395 (527)
T 3qs9_E 321 IVEKGFINATN-SSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF-SRKSFPCEQKG---LDNGYSISKFCNHKHQPGEYIF 395 (527)
T ss_dssp EC--CEEECCC-SCCEECCCTTCCCCEEEEEEEESCCEEEEEE-TTEEEECBCCB---CSSSSEEEEECCCTTCCSCEEE
T ss_pred EEccCcccccc-CcccEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECcCCccc---ccCCcEEEEecCCcccCEEEEE
Confidence 34456554411 2234667889999999999999999999999 88887654321 2245689999999999999999
Q ss_pred EEEec----------------------------------CCccEEEEEEEe----------------------c-cccce
Q psy15390 85 IATKI----------------------------------GPLKIFWEIIFH----------------------M-HYGEQ 107 (142)
Q Consensus 85 ~~~~~----------------------------------~~~~~~w~~~~~----------------------~-~~~~~ 107 (142)
.+.|. +.+.+.|.+... . .....
T Consensus 396 ~A~N~~g~~~~~~~L~V~~~P~i~~~~~~~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (527)
T 3qs9_E 396 HAENDDAQFTKMFTLNIRRKPQVLAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSS 475 (527)
T ss_dssp EEEETTEEEEEEEEEC--CCCEEEECCCCE---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEE
T ss_pred EEEeCCCcEEEEEEEEEecCCeEEEeCCCCEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEE
Confidence 99875 446888963210 0 00112
Q ss_pred EEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 108 LNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 108 l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
..+.....+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 476 s~L~i~~~~d~G~Y~C~A~N~~G~-~~~~~~L~V 508 (527)
T 3qs9_E 476 STLNMSEAIKGFLVKCCAYNSLGT-SCETILLNS 508 (527)
T ss_dssp EECCCCCSSCSCEEEEEEECSSCE-EEEEEEC--
T ss_pred EEEEEEEcCCCEEEEEEEEeCCCC-ceeEEEEec
Confidence 233334457999999999999996 677777765
No 88
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.76 E-value=2.7e-18 Score=107.07 Aligned_cols=100 Identities=16% Similarity=0.329 Sum_probs=78.3
Q ss_pred eEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEee-cCCCCCeEEEEEEEec----------
Q psy15390 21 VAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITK-ISRTEMGAYLCIATKI---------- 89 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~-v~~~d~G~y~C~~~~~---------- 89 (142)
.....|+++.|.|.+.+ +. .+.|++ +|..+... .++.|.|.+ ++..|+|.|+|.+.|.
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~-~i~W~k-~g~~l~~~--------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~ 77 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE-NLKWEK-NGQELPQK--------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKA 77 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT-TCEEEE-TTEEECSC--------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECC
T ss_pred EEEeCCcEEEEEEeCCC-CC-ceEEEE-CCEECCCC--------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEE
Confidence 34577999999999876 43 599999 88876432 345799999 9999999999987653
Q ss_pred ------------------------------------------------------CCccEEEEEEEec-----cccceEEE
Q psy15390 90 ------------------------------------------------------GPLKIFWEIIFHM-----HYGEQLNI 110 (142)
Q Consensus 90 ------------------------------------------------------~~~~~~w~~~~~~-----~~~~~l~i 110 (142)
+.+.+.|.+.... ...+.|.|
T Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~p~p~i~W~k~g~~i~~~~~~~~~L~i 157 (186)
T 1jbj_A 78 RVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTDKTIKWLKDGSIISPLNATKNTWNL 157 (186)
T ss_dssp CCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSSSCSCEEEEETTEECCCSSCCSSCCEE
T ss_pred EEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeCCCCeEEEEECCEECcccCCCcceEEE
Confidence 1246788764222 24567999
Q ss_pred ccCCCCCCeEEEEEEecCCCC
Q psy15390 111 TKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 111 ~~~~~~d~g~y~C~a~n~~~~ 131 (142)
..+..+|+|.|+|.|.|..|.
T Consensus 158 ~~v~~~D~G~Y~C~a~N~~g~ 178 (186)
T 1jbj_A 158 GNNAKDPRGTYQCQGAKETSN 178 (186)
T ss_dssp EETTSCCEEEEEEEESSCEEE
T ss_pred CCCCcCcCEEEEEEEEcCcCC
Confidence 999999999999999999875
No 89
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.76 E-value=2.9e-17 Score=118.87 Aligned_cols=119 Identities=20% Similarity=0.361 Sum_probs=90.3
Q ss_pred ceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec---------
Q psy15390 19 SSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI--------- 89 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~--------- 89 (142)
....+.+|+.+.|.|.+. .+.+.+.|++ ++..+....+..+ ...++.|.|.+++..|+|.|.|.+.|.
T Consensus 475 ~~~~v~~g~~v~l~C~~~-~~~~~i~W~~-~g~~l~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~ 551 (642)
T 1e07_A 475 NSKPVEDKDAVAFTCEPE-AQNTTYLWWV-NGQSLPVSPRLQL-SNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPV 551 (642)
T ss_pred CceeecCCCeEEEEEECC-CCCcEEEEEE-CCEeCCCCCcEEE-cCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCE
Confidence 345677999999999998 4778999999 8887765443332 223568999999999999999999864
Q ss_pred -----------------------------------CCccEEEEEEEe-ccccceEEEccCCCCCCeEEEEEEecCCCCCe
Q psy15390 90 -----------------------------------GPLKIFWEIIFH-MHYGEQLNITKISRTEMGAYLCIATNNVPPSV 133 (142)
Q Consensus 90 -----------------------------------~~~~~~w~~~~~-~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~ 133 (142)
+.+.+.|.+... +.....|.|.++..+|+|.|+|.|.|..|. .
T Consensus 552 ~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~-~ 630 (642)
T 1e07_A 552 TLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTYACFVSNLATG-R 630 (642)
T ss_pred EEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccCceEEECcccccCCeEEEEEEEecccC-c
Confidence 335777876533 334567999999999999999999999987 3
Q ss_pred eeEEEEEE
Q psy15390 134 SKRITVDV 141 (142)
Q Consensus 134 s~~~~l~V 141 (142)
+.++.|.|
T Consensus 631 ~~s~~l~V 638 (642)
T 1e07_A 631 NNSIVKSI 638 (642)
T ss_pred ceeEEEEE
Confidence 44444433
No 90
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.76 E-value=5.3e-17 Score=103.03 Aligned_cols=120 Identities=19% Similarity=0.300 Sum_probs=89.7
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee---ccceEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH---YGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~v~~~d~G~y~ 83 (142)
.+|.+. .+..+.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......++... ..+.|.|.++...|+|.|.
T Consensus 18 ~~P~~~----~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (215)
T 3mtr_A 18 YAPKLQ----GPVAVYTWEGNQVNITCEVFAYPSATISWFR-DGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYN 92 (215)
T ss_dssp EEEEEE----CCSEEEECTTCCEEEEEEEEEESCCEEEEEE-TTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEE
T ss_pred cCCccc----CCceEEEECCCCEEEEEEEeecCCCEEEEEE-CCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEE
Confidence 467773 4666889999999999999999999999999 8888765543333222 2467999999999999999
Q ss_pred EEEEecCC----------------------------ccEEEE------------------EE-------E--ec---ccc
Q psy15390 84 CIATKIGP----------------------------LKIFWE------------------II-------F--HM---HYG 105 (142)
Q Consensus 84 C~~~~~~~----------------------------~~~~w~------------------~~-------~--~~---~~~ 105 (142)
|.+.|... ..+.|. .. . .. ...
T Consensus 93 C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~ 172 (215)
T 3mtr_A 93 CTAVNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 172 (215)
T ss_dssp EEEECSSCEEEEEEEEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHH
T ss_pred EEEEECCCceEEEEEEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccccccccc
Confidence 99987511 123342 10 0 00 011
Q ss_pred ceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 106 EQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 106 ~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
..+.|..+..++.|.|+|.|.|..|.
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~ 198 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGL 198 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCB
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcc
Confidence 67899999999999999999999886
No 91
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.75 E-value=2.8e-18 Score=121.56 Aligned_cols=135 Identities=21% Similarity=0.206 Sum_probs=89.3
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCe-eEEEecCCcceecCCcceEEee------ccceEEEeecCCC
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPE-IKWRREDNQPISINKRKKVHMH------YGEQLNITKISRT 77 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~------~~~~l~i~~v~~~ 77 (142)
+..+|.+...........+.+|+.+.|.|.+.+.|.+. +.|++ ++..+........... ....|.|.+++..
T Consensus 307 V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 385 (524)
T 2ec8_A 307 VVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIY-MNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGT 385 (524)
T ss_dssp EESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEES-SSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGG
T ss_pred EeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEE-CCeeccCCccceeEEccCCCceeEEEEEEeecCcc
Confidence 44567765521123467899999999999999999998 99999 7877755432222111 1247999999999
Q ss_pred CCeEEEEEEEec------------------------------------CCccEEEEEEE-e-------------------
Q psy15390 78 EMGAYLCIATKI------------------------------------GPLKIFWEIIF-H------------------- 101 (142)
Q Consensus 78 d~G~y~C~~~~~------------------------------------~~~~~~w~~~~-~------------------- 101 (142)
|+|.|+|.+.|. +.+.+.|.+.. .
T Consensus 386 d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~~g~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (524)
T 2ec8_A 386 EGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSS 465 (524)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEECCSSSCEEEEEEEESCCEEECCCC----------CCCCCCCCCCC-
T ss_pred cCeEEEEEEEecCceEEEEEEEEEecCCeEeecccCcCcEEEEEEEeecCCEEEEEECCCcccccccccCCCCceeeeec
Confidence 999999999874 44678886531 1
Q ss_pred ccccceEE----EccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 102 MHYGEQLN----ITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 102 ~~~~~~l~----i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....+.+. +.....+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 466 ~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~V 508 (524)
T 2ec8_A 466 GPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGK-TSAYFNFAF 508 (524)
T ss_dssp CCSSSCEEEEEEECCCSCCC-----CEEECSSCE-EECCCCCCC
T ss_pred cCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCc-eEEEEEEEE
Confidence 11233343 3334469999999999999996 566666655
No 92
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.75 E-value=1.1e-17 Score=105.93 Aligned_cols=115 Identities=17% Similarity=0.342 Sum_probs=80.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccce----------ecCCcceEEee---ccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPI----------SINKRKKVHMH---YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~----------~~~~~~~~~~~---~~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|+++.|.|.+.+.|.+.+.|++.+ +..+ ......++... ....|.|.+++.+|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3d9a_L 7 SPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMY 86 (213)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEE
Confidence 466788999999999999999888899999832 2221 11111222222 123799999999999999
Q ss_pred EEEEEec-----------------------------------------------CCc-cEEEEEEEecc-----------
Q psy15390 83 LCIATKI-----------------------------------------------GPL-KIFWEIIFHMH----------- 103 (142)
Q Consensus 83 ~C~~~~~-----------------------------------------------~~~-~~~w~~~~~~~----------- 103 (142)
.|.+.+. +.+ .+.|.+.....
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 166 (213)
T 3d9a_L 87 FCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 166 (213)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCC
T ss_pred EEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCc
Confidence 9998753 112 58887521110
Q ss_pred --c------cceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 104 --Y------GEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 --~------~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
. .+.|.|..+..+|+|.|+|.|.|....
T Consensus 167 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 167 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 202 (213)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred cCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence 0 127889999999999999999997654
No 93
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.75 E-value=1.3e-17 Score=111.43 Aligned_cols=128 Identities=16% Similarity=0.162 Sum_probs=87.3
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+. ..+.+|++++|.|.+.+. .+.+.|++ +|..+..... ....+..|.|.+++..|+|.|.|
T Consensus 21 ~~~~P~i~~---~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k-~g~~~~~~~~---~~~~~~~L~I~~v~~~D~G~Y~C 91 (316)
T 3vh8_G 21 GQDKPFLSA---WPS-AVVPRGGHVTLRCHYRHR-FNNFMLYK-EDRIHIPIFH---GRIFQESFNMSPVTTAHAGNYTC 91 (316)
T ss_dssp ---CCEEEE---ESC-SEEETTSCEEEEEEBTTB-CCSEEEEE-SSCSSSCHHH---HCCBSSCEEECSCCGGGCEEEEE
T ss_pred CCCCCEeec---cCC-CccCCCCCEEEEEEccCC-CceEEEEe-CCCccceeec---CCcceEEEEECCCCcccCeEEEE
Confidence 345788876 455 467899999999999877 56899999 7766432110 12235679999999999999999
Q ss_pred EEEec------------------------------------------------CCccEEEEEEEe-------------cc
Q psy15390 85 IATKI------------------------------------------------GPLKIFWEIIFH-------------MH 103 (142)
Q Consensus 85 ~~~~~------------------------------------------------~~~~~~w~~~~~-------------~~ 103 (142)
.+.+. +++.+.|.+... ..
T Consensus 92 ~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~ 171 (316)
T 3vh8_G 92 RGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGQIHDGV 171 (316)
T ss_dssp EEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESSCCSEEEEEETTCCSCCEEEECEEETTE
T ss_pred EEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCCCCcEEEEEECCCccccceeeeeecCCC
Confidence 87631 123455543110 11
Q ss_pred ccceEEEccCCCCCCeEEEEEEecCCCCC----eeeEEEEEE
Q psy15390 104 YGEQLNITKISRTEMGAYLCIATNNVPPS----VSKRITVDV 141 (142)
Q Consensus 104 ~~~~l~i~~~~~~d~g~y~C~a~n~~~~~----~s~~~~l~V 141 (142)
....|.|.+++.+|+|.|+|.|.|..+.. .+..+.|.|
T Consensus 172 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V 213 (316)
T 3vh8_G 172 SKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVV 213 (316)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEE
T ss_pred ceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEe
Confidence 34578999999999999999999987641 244455544
No 94
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.74 E-value=2.8e-17 Score=112.31 Aligned_cols=130 Identities=18% Similarity=0.256 Sum_probs=95.3
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCC---CeeEEEecCCcceecC---CcceEEeeccceEEEeecCCCCC-
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPA---PEIKWRREDNQPISIN---KRKKVHMHYGEQLNITKISRTEM- 79 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~---~~~~w~~~~~~~~~~~---~~~~~~~~~~~~l~i~~v~~~d~- 79 (142)
++|.+.. .+....+.+|+.+.|.|.+.+.+. +.+.|++ ++..+... ...+.....++.|.|.+++..|+
T Consensus 102 ~~p~~~~---~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~ 177 (388)
T 2v5m_A 102 VAQYYEA---DVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHT-DEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGY 177 (388)
T ss_dssp CCCCCCC---BCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEE-TTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGG
T ss_pred ccccccc---CccceeeecCCcEEEEEECcCCCCCCcceEEEEe-CCCcccccccCCCCcEEEccCCcEEEecCCccccC
Confidence 4565554 455678899999999999987643 5799999 66655321 12233345567899999999999
Q ss_pred eEEEEEEEec----------------------------------------------------CCccEEEEEEEe------
Q psy15390 80 GAYLCIATKI----------------------------------------------------GPLKIFWEIIFH------ 101 (142)
Q Consensus 80 G~y~C~~~~~----------------------------------------------------~~~~~~w~~~~~------ 101 (142)
|.|+|.+.+. +.+.+.|.+...
T Consensus 178 G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~ 257 (388)
T 2v5m_A 178 KSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQ 257 (388)
T ss_dssp CCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEE
T ss_pred eeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccc
Confidence 9999998753 234688876410
Q ss_pred --------ccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 102 --------MHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 102 --------~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 258 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 304 (388)
T 2v5m_A 258 AVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGG-ESVETVLTV 304 (388)
T ss_dssp ECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred cccccCceecccCEEEECcCCHHHCeEEEEEEecCCCc-eeEEEEEEE
Confidence 112457999999999999999999999886 566666665
No 95
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.74 E-value=8.5e-18 Score=106.94 Aligned_cols=122 Identities=16% Similarity=0.311 Sum_probs=84.3
Q ss_pred ceeEEecCCcEEEEEEEecCCC-----CeeEEEecCCcce-----------ecCCcceEEeec------cceEEEeecCC
Q psy15390 19 SSVAVREEFNITLTCKAEGFPA-----PEIKWRREDNQPI-----------SINKRKKVHMHY------GEQLNITKISR 76 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~~-----~~~~w~~~~~~~~-----------~~~~~~~~~~~~------~~~l~i~~v~~ 76 (142)
+.+.+.+|++++|.|.+.+.+. +.+.|++ ++... ......+..... +.+|.|.+++.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~-~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 81 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQL-TDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRV 81 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEE-TTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEE-CCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccc
Confidence 3456789999999999887653 5799999 44322 011122222222 45799999999
Q ss_pred CCCeEEEEEEEec--------------------------------------------CCccEEEEEE------------E
Q psy15390 77 TEMGAYLCIATKI--------------------------------------------GPLKIFWEII------------F 100 (142)
Q Consensus 77 ~d~G~y~C~~~~~--------------------------------------------~~~~~~w~~~------------~ 100 (142)
.|+|.|.|.+.+. +.+.+.|.+. .
T Consensus 82 ~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~ 161 (222)
T 4i0k_A 82 TDEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQ 161 (222)
T ss_dssp GGCSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEE
T ss_pred ccCEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeE
Confidence 9999999999853 2356778541 0
Q ss_pred ecccc---ceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 101 HMHYG---EQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 101 ~~~~~---~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
..... ..+.|..++.+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 162 ~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 205 (222)
T 4i0k_A 162 MANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQ-QDAHGSVTIT 205 (222)
T ss_dssp EECTTSCEEEEEEEEEECCTTCEEEEEEEETTTT-EEEEEEEECC
T ss_pred EcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCC-CceEEEEEEe
Confidence 00111 13678889999999999999999986 5777777663
No 96
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.74 E-value=6e-17 Score=112.54 Aligned_cols=124 Identities=15% Similarity=0.135 Sum_probs=81.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec-------
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI------- 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~------- 89 (142)
.+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+...............|.|.+++..|+|.|+|.+.|.
T Consensus 54 ~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~-~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~ 132 (423)
T 3qs7_E 54 EAAAVEVDVSASITLQVLVDAPGNISCLWVF-KHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTIL 132 (423)
T ss_dssp --CEEEECSSCCEEEEEECSCCSSCEEEEEE-TTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEE
T ss_pred ccccEEEecCCcEEEEEEEEcCCCCeEEEEE-CCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEE
Confidence 5557889999999999999999999999999 66555432111101111235999999999999999999875
Q ss_pred ----------------------------------CCccEEEEEEEeccc-------cceEEE-ccCCCCCCeEEEEEEec
Q psy15390 90 ----------------------------------GPLKIFWEIIFHMHY-------GEQLNI-TKISRTEMGAYLCIATN 127 (142)
Q Consensus 90 ----------------------------------~~~~~~w~~~~~~~~-------~~~l~i-~~~~~~d~g~y~C~a~n 127 (142)
|.+.+.|.+...... ...... ......|+|.|+|.|.|
T Consensus 133 ~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N 212 (423)
T 3qs7_E 133 FTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARN 212 (423)
T ss_dssp EEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEEC
T ss_pred EEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEc
Confidence 346778865322110 000111 11257899999999999
Q ss_pred CCCCCeeeEEEEEE
Q psy15390 128 NVPPSVSKRITVDV 141 (142)
Q Consensus 128 ~~~~~~s~~~~l~V 141 (142)
..|...+..+.|.|
T Consensus 213 ~~G~~~~~~~~l~V 226 (423)
T 3qs7_E 213 ELGRECTRLFTIDL 226 (423)
T ss_dssp SSCEEEEECEEEES
T ss_pred CCCCcceeeEEEEE
Confidence 99875444466655
No 97
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.74 E-value=4.2e-17 Score=120.77 Aligned_cols=127 Identities=24% Similarity=0.384 Sum_probs=92.4
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCC-eeEEEecCCcceecCCcceEEee--ccceEEEeecCCCCCeEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAP-EIKWRREDNQPISINKRKKVHMH--YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~--~~~~l~i~~v~~~d~G~y 82 (142)
.++|.+... ......+.+|+.+.|.|.+.+.+.+ .+.|++ +|+.+........... ..+.|.|.++...|+|.|
T Consensus 616 ~~~p~~~~~--~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~-~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 692 (816)
T 3dmk_A 616 MVLPRIIPF--AFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTL-DGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNF 692 (816)
T ss_dssp ECCCCCBCC--CCCSSCEESSCEEEEEEBCCCSSSCCEEEEEE-TTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEE
T ss_pred ecCCccccc--cccccccCCCCeEEEEEEEeCCCCCCEEEEEE-CCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEE
Confidence 345555432 2344567889999999999765544 899999 8887754433332222 235799999999999999
Q ss_pred EEEEEec------------------------------------------CCccEEEEEEEe---------------cccc
Q psy15390 83 LCIATKI------------------------------------------GPLKIFWEIIFH---------------MHYG 105 (142)
Q Consensus 83 ~C~~~~~------------------------------------------~~~~~~w~~~~~---------------~~~~ 105 (142)
+|.+.|. +.+.+.|.+... ....
T Consensus 693 ~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~ 772 (816)
T 3dmk_A 693 TCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEE 772 (816)
T ss_dssp EEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEET
T ss_pred EEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecC
Confidence 9999875 446788876421 1124
Q ss_pred ceEEEccCCCCCCeEEEEEEecCCCCCeee
Q psy15390 106 EQLNITKISRTEMGAYLCIATNNVPPSVSK 135 (142)
Q Consensus 106 ~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~ 135 (142)
+.|.|.+++.+|+|.|+|.|.|..|...+.
T Consensus 773 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 802 (816)
T 3dmk_A 773 GTLHVDNIQKTNEGYYLCEAINGIGSGLSA 802 (816)
T ss_dssp TEEEECSCCGGGCEEEEEEEECSSSSCEEE
T ss_pred CEEEECcCChhhCeEEEEEEEeCCCCCcEE
Confidence 579999999999999999999999985443
No 98
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.74 E-value=9.2e-17 Score=104.26 Aligned_cols=116 Identities=19% Similarity=0.263 Sum_probs=85.4
Q ss_pred CceeEEecCCcEEEEEEE-ecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec-------
Q psy15390 18 PSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI------- 89 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~------- 89 (142)
+....+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+.. ...+..|.|.+++..|+|.|.|.+.|.
T Consensus 89 ~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~-~g~~~~~-------~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 160 (262)
T 3rjd_A 89 VSSRVFTEGEPLALRCHAWKDKLVYNVLYYR-NGKAFKF-------FHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG 160 (262)
T ss_dssp ESCSEEETTSCEEEEEEEGGGCCCEEEEEEE-TTEEEEE-------EEECCCEEESSCCGGGCEEEEEEEESSSEEEEEC
T ss_pred CCCeEEecCCeEEEEEEccCCCCCceEEEEE-CCccccc-------cCCCCeEEEEECChhhCEEEEEEEeCCCCccccc
Confidence 344567899999999999 667777999999 8776632 223567999999999999999999764
Q ss_pred -------------------------------------CC-cc----EEEEEE----EeccccceEEEccCCCCCCeEEEE
Q psy15390 90 -------------------------------------GP-LK----IFWEII----FHMHYGEQLNITKISRTEMGAYLC 123 (142)
Q Consensus 90 -------------------------------------~~-~~----~~w~~~----~~~~~~~~l~i~~~~~~d~g~y~C 123 (142)
+. +. +.|.+. ........|.|..++.+|+|.|+|
T Consensus 161 ~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 240 (262)
T 3rjd_A 161 ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWC 240 (262)
T ss_dssp EEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEEESCCEEEESSCCGGGCEEEEE
T ss_pred eEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecccCCCceEEEEEechhhCeEEEE
Confidence 11 23 344321 112334579999999999999999
Q ss_pred EEecCCCC--CeeeEEEEEE
Q psy15390 124 IATNNVPP--SVSKRITVDV 141 (142)
Q Consensus 124 ~a~n~~~~--~~s~~~~l~V 141 (142)
.|.|..|. ..+..+.|.|
T Consensus 241 ~a~n~~G~~~~~s~~~~l~V 260 (262)
T 3rjd_A 241 EAATEDGNVLKRSPELELQV 260 (262)
T ss_dssp EEEETTSSCEEECCCEEECE
T ss_pred EEEcccCceEEecCCeEEEE
Confidence 99999986 3355666665
No 99
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.73 E-value=6.4e-17 Score=91.51 Aligned_cols=95 Identities=20% Similarity=0.191 Sum_probs=68.1
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
.+..+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+....+..+....
T Consensus 4 ~~~~~P~~~~---~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~~~~~~~~~~------------------ 61 (103)
T 3qp3_A 4 TLDHAPRITL---RMRSHRVPCGQNTRFILNVQSKPTAEVKWYH-NGVELQESSKIHYTNTS------------------ 61 (103)
T ss_dssp TTCEEEEEEE---CCCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEEET------------------
T ss_pred CCCCCCEEEe---CCcceEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCCCCCEEEEECC------------------
Confidence 4556888888 7788899999999999999999999999999 87766443221111100
Q ss_pred EEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 84 CIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 84 C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 62 --------------------~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l~V 98 (103)
T 3qp3_A 62 --------------------GVLTLEILDCHTDDSGTYRAVCTNYKGE-ASDYATLDV 98 (103)
T ss_dssp --------------------TEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred --------------------CEEEEEEcCCCcccCEEEEEEEEeCCCc-EEEEEEEEE
Confidence 1124777777788888888888887775 466666665
No 100
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.73 E-value=6.1e-17 Score=90.07 Aligned_cols=91 Identities=18% Similarity=0.304 Sum_probs=68.9
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCC--cceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDN--QPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~--~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
++|.|.. .+..+.+.+|+.+.|.|.+.+.|.|.+.|++ ++ ..+.... .....
T Consensus 1 ~~P~i~~---~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~~~~~~~~~~~--~~~~~-------------------- 54 (93)
T 1wit_A 1 LKPKILT---ASRKIKIKAGFTHNLEVDFIGAPDPTATWTV-GDSGAALAPEL--LVDAK-------------------- 54 (93)
T ss_dssp CCCEECC---CCCEEEECTTBCCEEEEEEECCSSCEEEEEC-STTTCBCSTTS--EEEEE--------------------
T ss_pred CCCeEEc---CCCceEEeCCCEEEEEEEEEEcCCCEEEEEE-CCCCcccCCcE--EEEec--------------------
Confidence 4788866 6778889999999999999999999999999 76 5553221 11000
Q ss_pred EEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 85 IATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 85 ~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 55 ------------------~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l~V~ 93 (93)
T 1wit_A 55 ------------------SSTTSIFFPSAKRADSGNYKLKVKNELGE-DEAIFEVIVQ 93 (93)
T ss_dssp ------------------TTEEEEECTTBCGGGCEEEEEEEEETTEE-EEEEEEEEEC
T ss_pred ------------------CCEEEEEECCCChhcCEEEEEEEEcCCCe-EEEEEEEEEC
Confidence 11235888888899999999999999885 6788888875
No 101
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=109.56 Aligned_cols=123 Identities=19% Similarity=0.232 Sum_probs=87.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCC-CeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecC-----
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPA-PEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIG----- 90 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~----- 90 (142)
.+....+.+|+.+.|.|.+.+... +.+.|++.++..+.... +.....+..|.|.+++..|+|.|+|.+.|..
T Consensus 95 ~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s 172 (292)
T 4dkd_C 95 LAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHT--NYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMS 172 (292)
T ss_dssp SCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSC--CEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEEC
T ss_pred cCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCC--cccccCCceEEECCCCHHHCeEEEEEEEeCCCceeE
Confidence 456778899999999999987322 67999994466554332 2223445569999999999999999998531
Q ss_pred -------------C------------------------------ccEEEEEEEe-----------c---cccceEEEccC
Q psy15390 91 -------------P------------------------------LKIFWEIIFH-----------M---HYGEQLNITKI 113 (142)
Q Consensus 91 -------------~------------------------------~~~~w~~~~~-----------~---~~~~~l~i~~~ 113 (142)
+ ..+.|.+... . .....|.|.++
T Consensus 173 ~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 252 (292)
T 4dkd_C 173 ISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQV 252 (292)
T ss_dssp CCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECcc
Confidence 1 1233321100 0 01237999999
Q ss_pred CCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 114 SRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 114 ~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
+.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 253 ~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 280 (292)
T 4dkd_C 253 DFQHAGNYSCVASNVQGK-HSTSMFFRVV 280 (292)
T ss_dssp CTTSCEEEEEEEECSSCE-EEEEEEECC-
T ss_pred ChhcCeEEEEEEecCCCC-ceeEEEEEEe
Confidence 999999999999999986 6777777764
No 102
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.73 E-value=1.1e-16 Score=101.30 Aligned_cols=124 Identities=16% Similarity=0.265 Sum_probs=84.3
Q ss_pred CCceeEEecCCcEEEEEEEecC-------CCCeeEEEecCCcc------ee---------cCCcceEEeec-----cceE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-------PAPEIKWRREDNQP------IS---------INKRKKVHMHY-----GEQL 69 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-------~~~~~~w~~~~~~~------~~---------~~~~~~~~~~~-----~~~l 69 (142)
.+..+.+.+|++++|.|.+.+. +.+.+.|++ ++.. +. .....++.... +.+|
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFR-DGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEE-TTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEe-cCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 5677889999999999998754 456899999 4431 11 11112333222 2379
Q ss_pred EEeecCCCCCeEEEEEEEecC--------------------------------------------------CccEEEEEE
Q psy15390 70 NITKISRTEMGAYLCIATKIG--------------------------------------------------PLKIFWEII 99 (142)
Q Consensus 70 ~i~~v~~~d~G~y~C~~~~~~--------------------------------------------------~~~~~w~~~ 99 (142)
.|.+++..|+|.|.|.+.+.. .+.+.|.+.
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~ 164 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGN 164 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEESS
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEeCC
Confidence 999999999999999876431 235667643
Q ss_pred Eec------cccceEEEccCCCCCCeEEEEEEecCCCC-CeeeEEEEEE
Q psy15390 100 FHM------HYGEQLNITKISRTEMGAYLCIATNNVPP-SVSKRITVDV 141 (142)
Q Consensus 100 ~~~------~~~~~l~i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~V 141 (142)
... ...+.|.|..+...|.|.|+|.|.|..+. ..+..+.|.|
T Consensus 165 ~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 165 ALSPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp TTSSSCSSCCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred CCccCCCCceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 211 23467899899899999999999997533 3566777665
No 103
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.73 E-value=9.2e-17 Score=105.95 Aligned_cols=122 Identities=18% Similarity=0.202 Sum_probs=90.1
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
..+|.+.. .+....+.+|+++.|.|.+.+ .+.|++ ++..+ ......++.|.|.+++..|+|.|+|.
T Consensus 10 ~~~P~i~~---~~~~~~v~~G~~v~l~C~~~~----~i~W~~-~~~~~------~~~~~~~~~L~i~~~~~~d~G~Y~C~ 75 (290)
T 2o26_X 10 PSPPSIHP---AQSELIVEAGDTLSLTCIDPD----FVRWTF-KTYFN------EMVENKKNEWIQEKAEATRTGTYTCS 75 (290)
T ss_dssp --CCEESS---CSSEEEEETTSCEEEEEECTT----EEEEEE-ECSSS------CEEEECSSEEEETTCCGGGCEEEEEE
T ss_pred CCCCEEeC---CCCeEEEcCCCcEEEEECCCC----cEEEec-CCcce------eeecCCCceEEEeccCHHhCeEEEEE
Confidence 35677765 677888999999999999876 899999 66655 11233447899999999999999998
Q ss_pred EEec--------------------------------------CC-ccEEEEE-E---------EeccccceEEEccCCCC
Q psy15390 86 ATKI--------------------------------------GP-LKIFWEI-I---------FHMHYGEQLNITKISRT 116 (142)
Q Consensus 86 ~~~~--------------------------------------~~-~~~~w~~-~---------~~~~~~~~l~i~~~~~~ 116 (142)
+.|. +. +.+.|.. . +.......|.|.+++.+
T Consensus 76 ~~ng~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~ 155 (290)
T 2o26_X 76 NSNGLTSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRA 155 (290)
T ss_dssp ESSSCEEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSCCSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGG
T ss_pred eeCCccEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCCCCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHH
Confidence 8531 33 5688842 1 22233467999999999
Q ss_pred CCe-EEEEEEecCCCCCeeeEEEEEE
Q psy15390 117 EMG-AYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 117 d~g-~y~C~a~n~~~~~~s~~~~l~V 141 (142)
|+| .|+|.|.|..+...+..+.|.|
T Consensus 156 d~G~~Y~C~a~n~~~~~~s~~~~l~V 181 (290)
T 2o26_X 156 YHRLCVRCAAQRDGTWLHSDKFTLKV 181 (290)
T ss_dssp GTTCEEEEEEEETTEEEECCCEEEEE
T ss_pred HCCCEEEEEEEECCceEEeEEEEEEE
Confidence 999 9999999986554454555554
No 104
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.73 E-value=2.2e-16 Score=90.95 Aligned_cols=47 Identities=23% Similarity=0.325 Sum_probs=40.2
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecC
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISIN 56 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~ 56 (142)
..||.|.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+...
T Consensus 5 ~~pp~i~~---~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~ 51 (114)
T 2cqv_A 5 SSGPQIIQ---FPEDQKVRAGESVELFGKVTGTQPITCTWMK-FRKQIQES 51 (114)
T ss_dssp CCCCEESC---CCCSEEEETTCCEEEEEEEESSSSCEEEEEE-SSSBCCCS
T ss_pred CCCCEEEe---CCCCeEEeCCCeEEEEEEEEcCCCCEEEEEE-CCEECcCC
Confidence 36888887 7788899999999999999999999999999 77776543
No 105
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.73 E-value=5.1e-17 Score=101.80 Aligned_cols=119 Identities=18% Similarity=0.268 Sum_probs=81.3
Q ss_pred CCceeEEecCCcEEEEEEEec-CCCCeeEEEecCCccee---cCC-------------cceEEeeccceEEEeecCCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQPIS---INK-------------RKKVHMHYGEQLNITKISRTEM 79 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~~~---~~~-------------~~~~~~~~~~~l~i~~v~~~d~ 79 (142)
.+..+.+.+|++++|.|.+.+ .+.+.+.|++ ++..+. ... ..++....+++|.|.+++.+|+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLF-NETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDT 82 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEE-TTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGC
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEE-CCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccC
Confidence 566788999999999999875 4456899999 665432 110 0133334467899999999999
Q ss_pred eEEEEEEEec---------------------------------------------CCccEEEEEEE-eccccceEEEccC
Q psy15390 80 GAYLCIATKI---------------------------------------------GPLKIFWEIIF-HMHYGEQLNITKI 113 (142)
Q Consensus 80 G~y~C~~~~~---------------------------------------------~~~~~~w~~~~-~~~~~~~l~i~~~ 113 (142)
|.|.|.+.+. +.+.+.|.+.. .......|.|...
T Consensus 83 G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~~l~i~~~ 162 (193)
T 2if7_A 83 GSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWD 162 (193)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSSEEEEEEC
T ss_pred ceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCCeEEEEec
Confidence 9999998754 12456665421 1122345666544
Q ss_pred CCC-CCeEEEEEEecCCCCCeeeEE
Q psy15390 114 SRT-EMGAYLCIATNNVPPSVSKRI 137 (142)
Q Consensus 114 ~~~-d~g~y~C~a~n~~~~~~s~~~ 137 (142)
... |+|.|+|.|.|..+. .+..+
T Consensus 163 ~~~~d~G~Y~C~a~N~~g~-~s~~~ 186 (193)
T 2if7_A 163 PRISSEQDYTCIAENAVSN-LSFSV 186 (193)
T ss_dssp TTTCSCCEEEEEEEETTEE-EEEEE
T ss_pred cCcCCCCcEEEEEECCCCc-ccccc
Confidence 443 899999999999886 45444
No 106
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.73 E-value=6.7e-17 Score=116.99 Aligned_cols=114 Identities=25% Similarity=0.447 Sum_probs=89.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec-------
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI------- 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~------- 89 (142)
.+....+.+|+.+.|.|.+.+.|.+.+.|++ +|..+. .+..|.|.++...|+|.|+|.+.|.
T Consensus 387 ~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~~~----------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s 455 (642)
T 1e07_A 387 SPSYTYYRPGVNLSLSCHAASNPPAQYSWLI-DGNIQQ----------HTQELFISNITEKNSGLYTCQANNSASGHSRT 455 (642)
T ss_pred cCCceEecCCCcEEEEEEcCccCCCeEEEEE-CCEEcC----------CCceEEEccCChhhCeEEEEEEEcCCCCCccc
Confidence 4556678899999999999999999999999 776543 2346999999999999999999874
Q ss_pred --------------------------------------CCccEEEEEEEe----------ccccceEEEccCCCCCCeEE
Q psy15390 90 --------------------------------------GPLKIFWEIIFH----------MHYGEQLNITKISRTEMGAY 121 (142)
Q Consensus 90 --------------------------------------~~~~~~w~~~~~----------~~~~~~l~i~~~~~~d~g~y 121 (142)
+.+.+.|.+... ....+.|.|.+++.+|+|.|
T Consensus 456 ~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 535 (642)
T 1e07_A 456 TVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAY 535 (642)
T ss_pred ceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCCCCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceE
Confidence 224667764321 12245799999999999999
Q ss_pred EEEEecCCCCCeeeEEEEEE
Q psy15390 122 LCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 122 ~C~a~n~~~~~~s~~~~l~V 141 (142)
+|.|.|..|...+..+.|.|
T Consensus 536 ~C~a~n~~g~~~s~~~~l~V 555 (642)
T 1e07_A 536 VCGIQNSVSANRSDPVTLDV 555 (642)
T ss_pred EEEeEcCCCCccCCCEEEEE
Confidence 99999998875555566655
No 107
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.73 E-value=1.1e-16 Score=89.78 Aligned_cols=93 Identities=18% Similarity=0.213 Sum_probs=66.8
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+|.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+....+.......
T Consensus 4 ~~P~~~~---~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~~~~~~~~~~~--------------------- 58 (99)
T 1g1c_A 4 EAPKIFE---RIQSQTVGQGSDAHFRVRVVGKPDPECEWYK-NGVKIERSDRIYWYWPE--------------------- 58 (99)
T ss_dssp EEEEEEE---CCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEEEE---------------------
T ss_pred CCCceEe---cCcceEEcCCCcEEEEEEEEEeCCCEEEEEE-CCEECCCCCCEEEEEcC---------------------
Confidence 4788877 6778889999999999999999999999999 88766433221111100
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 59 ----------------~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~V 96 (99)
T 1g1c_A 59 ----------------DNVCELVIRDVTGEDSASIMVKAINIAGE-TSSHAFLLV 96 (99)
T ss_dssp ----------------TTEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred ----------------CCEEEEEECCCCcCCCEEEEEEEEECCCc-EEEEEEEEE
Confidence 11224777788888888888888888775 555666665
No 108
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.73 E-value=4.5e-17 Score=108.64 Aligned_cols=132 Identities=17% Similarity=0.215 Sum_probs=92.7
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEe-cCCCCeeEEEecCCcceecCCcceEE----eeccceEEEeecCCCCCe
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVH----MHYGEQLNITKISRTEMG 80 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~----~~~~~~l~i~~v~~~d~G 80 (142)
..+|.+.. ......+..|+.+.+.|.+. +.|.+.+.|++ ++..+......... ....+.|.|.++...|.|
T Consensus 115 ~~~P~~~~---~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g 190 (313)
T 4fqp_A 115 LAKPQNTA---EVQKVQLTGEPVPMARCVSTGGRPPAQITWHS-DLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGK 190 (313)
T ss_dssp BBCCEEEE---EECCBCCCSSCEEEEEEEEEEEBSCCEEEEEE-TTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTC
T ss_pred ccCCccee---cccceEeecCceEEEEEEccCccCCcEEEeec-CCccccccceeeeecccccccceeeeecccccccCe
Confidence 34566554 34455567788899999865 67888999999 76665432111100 011134888888999999
Q ss_pred EEEEEEEec---------------------------------------------CCc-cEEEEEEEe------ccccceE
Q psy15390 81 AYLCIATKI---------------------------------------------GPL-KIFWEIIFH------MHYGEQL 108 (142)
Q Consensus 81 ~y~C~~~~~---------------------------------------------~~~-~~~w~~~~~------~~~~~~l 108 (142)
.|+|.+.|. |.+ .+.|.+... ....+.|
T Consensus 191 ~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L 270 (313)
T 4fqp_A 191 NVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQL 270 (313)
T ss_dssp EEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEE
T ss_pred eEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEE
Confidence 999999864 223 578875321 2235679
Q ss_pred EEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 109 NITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 109 ~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 271 ~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~ 303 (313)
T 4fqp_A 271 LIRPVDKPINTTLICNVTNALGA-RQAELTVQVK 303 (313)
T ss_dssp EECCCSSCCEEEEEEEEECSSCE-EEEEEEEEEE
T ss_pred EECcCChhhCEEEEEEEEeCCCc-EEEEEEEEEE
Confidence 99999999999999999999996 6777888773
No 109
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.73 E-value=8.8e-17 Score=90.42 Aligned_cols=95 Identities=21% Similarity=0.446 Sum_probs=67.9
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+......+.....++
T Consensus 2 ~~~~P~~~~---~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~~----------------- 60 (100)
T 2kdg_A 2 AMGPPRFIQ---VPENMSIDEGRFCRMDFKVSGLPAPDVSWYL-NGRTVQSDDLHKMIVSEKG----------------- 60 (100)
T ss_dssp CCEEEECCC---CCCCEEEETTCCEEEEEECEEESCCEEEEEE-TTEEECCCSSSCEEEETTT-----------------
T ss_pred CCCCCeEEe---CCCCEEecCCCEEEEEEEEEeeCCCEEEEEE-CCEECcCCCcEEEEEcCCC-----------------
Confidence 345788776 6778889999999999999999999999999 8877654332221111111
Q ss_pred EEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 85 IATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 85 ~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 61 --------------------~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V 96 (100)
T 2kdg_A 61 --------------------LHSLIFEVVRASDAGAYACVAKNRAGE-ATFTVQLDV 96 (100)
T ss_dssp --------------------EEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred --------------------eEEEEECCCCcccCEEEEEEEEcCCCe-EEEEEEEEE
Confidence 124777778888888888888888775 566666665
No 110
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.72 E-value=7.4e-17 Score=107.33 Aligned_cols=117 Identities=18% Similarity=0.274 Sum_probs=85.5
Q ss_pred EecCCcEEEEEEEec----------CCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEEEEEec--
Q psy15390 23 VREEFNITLTCKAEG----------FPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLCIATKI-- 89 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~----------~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C~~~~~-- 89 (142)
+.+|+.+.|.|.+.+ .|.+.+.|++ ++..+....+.......+ ..|.|.+++..|+|.|+|.+.|.
T Consensus 110 ~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 188 (317)
T 2y25_A 110 ALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSH-NGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKT 188 (317)
T ss_dssp HTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEE-SSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSC
T ss_pred cccCCCeEEEeeccccEEEEEeccCCCCcEEEEEE-CCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCc
Confidence 456777777777766 6788999999 887776544433222222 35999999999999999998762
Q ss_pred -------------------------------------------------------------CCccEEEEEEE--------
Q psy15390 90 -------------------------------------------------------------GPLKIFWEIIF-------- 100 (142)
Q Consensus 90 -------------------------------------------------------------~~~~~~w~~~~-------- 100 (142)
+.+.+.|.+..
T Consensus 189 ~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~ 268 (317)
T 2y25_A 189 GHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDH 268 (317)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSS
T ss_pred eEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCc
Confidence 33578886531
Q ss_pred -ecc-c---cceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 101 -HMH-Y---GEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 101 -~~~-~---~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
... . ...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 269 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-~~~~~~l~V 313 (317)
T 2y25_A 269 CNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGS-ETSDFTVSV 313 (317)
T ss_dssp EEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCe-EEEEEEEEE
Confidence 111 1 127999999999999999999999986 577777766
No 111
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.72 E-value=7e-17 Score=119.61 Aligned_cols=121 Identities=24% Similarity=0.394 Sum_probs=93.5
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ +|..+.. .++.|.|.+++..|+|.|+|.+
T Consensus 342 ~~~~~~~---~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~g~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a 408 (816)
T 3dmk_A 342 APLSAKI---DPPTQTVDFGRPAVFTCQYTGNPIKTVSWMK-DGKAIGH---------SESVLRIESVKKEDKGMYQCFV 408 (816)
T ss_dssp EEEEEEE---ESSEEECCTTSCEEEEEEEEEECCCEEEEEE-TTEECSC---------CSSEEEESSCCGGGCEEEEEEE
T ss_pred CCCceee---CCCceEecCCCCEEEEEEEeccCCCEEEEEE-CCEECCC---------CCCEEEEcCCCHHHCEEEEEEE
Confidence 3455544 5667788899999999999999999999999 8876532 2457999999999999999998
Q ss_pred Eec---------------------------------------------CCccEEEEEEEec--------------cc---
Q psy15390 87 TKI---------------------------------------------GPLKIFWEIIFHM--------------HY--- 104 (142)
Q Consensus 87 ~~~---------------------------------------------~~~~~~w~~~~~~--------------~~--- 104 (142)
.|. +.+.+.|.+.... ..
T Consensus 409 ~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~ 488 (816)
T 3dmk_A 409 RNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDV 488 (816)
T ss_dssp ECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCE
T ss_pred ECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCc
Confidence 864 3357888652110 01
Q ss_pred cceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 105 GEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 105 ~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
...|.|..+..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 489 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 524 (816)
T 3dmk_A 489 VSYLNITSVHANDGGLYKCIAKSKVGV-AEHSAKLNV 524 (816)
T ss_dssp EEEEEESSCCTTTCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred EEEEEEeeccccCCEEEEEEEEECCCe-EEEEEEEEE
Confidence 125899999999999999999999886 566677766
No 112
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.72 E-value=1.5e-16 Score=113.96 Aligned_cols=134 Identities=13% Similarity=0.207 Sum_probs=92.7
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCee----EEEec-CCc--ceec-------CCcceEEee---ccc
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEI----KWRRE-DNQ--PISI-------NKRKKVHMH---YGE 67 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~----~w~~~-~~~--~~~~-------~~~~~~~~~---~~~ 67 (142)
+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+ .|++. +|. .+.. ....++... .++
T Consensus 328 V~~~p~~~~---~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g 404 (585)
T 2ocw_A 328 VNEESTIPR---SPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNG 404 (585)
T ss_pred Eeccccccc---CCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCc
Confidence 445676665 567778889999999999999888876 68872 343 2221 111122222 223
Q ss_pred --eEEEeecCCCCCeEEEEEEEec----------------------------------------------CCccEEEEEE
Q psy15390 68 --QLNITKISRTEMGAYLCIATKI----------------------------------------------GPLKIFWEII 99 (142)
Q Consensus 68 --~l~i~~v~~~d~G~y~C~~~~~----------------------------------------------~~~~~~w~~~ 99 (142)
.|.|.+++..|+|.|+|.+ |. +.+.+.|.+.
T Consensus 405 ~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~ 483 (585)
T 2ocw_A 405 TFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNT 483 (585)
T ss_pred EEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeec
Confidence 3999999999999999998 43 1235678653
Q ss_pred Eec-------------------cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 100 FHM-------------------HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 100 ~~~-------------------~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
... .....|.|.+++.+|+|.|+|.|.|..|...+..+.|.|+
T Consensus 484 g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~ 545 (585)
T 2ocw_A 484 GCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVE 545 (585)
T ss_pred CceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEE
Confidence 210 0114799999999999999999999988755555777764
No 113
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.72 E-value=2.5e-16 Score=100.02 Aligned_cols=123 Identities=17% Similarity=0.279 Sum_probs=80.1
Q ss_pred CCceeEEecCCcEEEEEEEecCC-----CCeeEEEecCCcceec-------------CCcceEEeec------cceEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP-----APEIKWRREDNQPISI-------------NKRKKVHMHY------GEQLNIT 72 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~-----~~~~~w~~~~~~~~~~-------------~~~~~~~~~~------~~~l~i~ 72 (142)
.+..+.+.+|+++.|.|.+.+.| ...+.|++ ++..+.. ....+..... +.+|.|.
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~-~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEM-EDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEE-TTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEE-CCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 45567888999999999987655 33799999 4322210 0011222221 2379999
Q ss_pred ecCCCCCeEEEEEEEec-----------------------------------------CCccEEEEEE-E----------
Q psy15390 73 KISRTEMGAYLCIATKI-----------------------------------------GPLKIFWEII-F---------- 100 (142)
Q Consensus 73 ~v~~~d~G~y~C~~~~~-----------------------------------------~~~~~~w~~~-~---------- 100 (142)
+++.+|+|.|.|.+.+. +.+.+.|.+. .
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~ 165 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTT 165 (222)
T ss_dssp SCCGGGCEEEEEEEESSSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEE
T ss_pred CcccccCeEEEEEEEeCCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceE
Confidence 99999999999999863 3467888653 1
Q ss_pred -eccccceEE---EccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 101 -HMHYGEQLN---ITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 101 -~~~~~~~l~---i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.....+.+. +..+..+|.|.|+|.|.|..|. ....+.|.|
T Consensus 166 ~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~-~~~~~~l~v 209 (222)
T 3sbw_C 166 NSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPE-ENHTAELVI 209 (222)
T ss_dssp ECC----CEEEEEEEEEECCTTCEEEEEEEETTTT-EEEEEEEEC
T ss_pred EEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccc-eeeEEEEEe
Confidence 011111122 2245678999999999999986 566666665
No 114
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.72 E-value=5.9e-17 Score=108.55 Aligned_cols=135 Identities=16% Similarity=0.264 Sum_probs=92.7
Q ss_pred ccCCCeeeecCCCCceeEEecC---CcEEEEEE-EecCCCCeeEEEecCCcceecCCcce---EEeeccceEEEeecCCC
Q psy15390 5 KSVPPNILDTESTPSSVAVREE---FNITLTCK-AEGFPAPEIKWRREDNQPISINKRKK---VHMHYGEQLNITKISRT 77 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g---~~v~l~C~-~~~~~~~~~~w~~~~~~~~~~~~~~~---~~~~~~~~l~i~~v~~~ 77 (142)
+..+|.+.... .+..+.+.+| +.+.|.|. +.+.|.+.+.|++ ++.......... -.....+.|.|.++...
T Consensus 127 V~~~p~~~~~~-~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 204 (331)
T 3u83_A 127 VMAKPTNWIEG-TQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWET-RLKGEAEYQEIRNPNGTVTVISRYRLVPSREA 204 (331)
T ss_dssp EEBCCEEEEEE-CSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEE-SSCCEEEEEEEECTTSCEEEEEEEEECCCGGG
T ss_pred EecCCcceeec-CCCceeecCCCccceEEEEEEecCCcCCceEEEEc-CCCCccccceeECCCCcEEEEEEEEEEecccc
Confidence 44566653321 4556678888 77999998 8888999999998 422221100000 00111235788888999
Q ss_pred CCeEEEEEEEec-------------------------------------------CCcc-EEEEEEEec------cccce
Q psy15390 78 EMGAYLCIATKI-------------------------------------------GPLK-IFWEIIFHM------HYGEQ 107 (142)
Q Consensus 78 d~G~y~C~~~~~-------------------------------------------~~~~-~~w~~~~~~------~~~~~ 107 (142)
|+|.|+|.+.|. +.+. +.|.+.... ...+.
T Consensus 205 d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~ 284 (331)
T 3u83_A 205 HQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRT 284 (331)
T ss_dssp TTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTE
T ss_pred CCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcE
Confidence 999999999875 3345 888753211 13567
Q ss_pred EEEc-cCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 108 LNIT-KISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 108 l~i~-~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
|.|. +++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 285 L~i~~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~ 319 (331)
T 3u83_A 285 LFFKGPINYSLAGTYICEATNPIGT-RSGQVEVNIT 319 (331)
T ss_dssp EEECSCCCGGGCEEEEEEEEETTEE-EEEEEEECCB
T ss_pred EEEeCCCccccCeEEEEEEEecccc-ceEEEEEEEe
Confidence 9998 89999999999999999996 6788887764
No 115
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.72 E-value=3.9e-17 Score=110.29 Aligned_cols=123 Identities=19% Similarity=0.252 Sum_probs=88.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCC-----------CeeEEEecCCcce----ecC---CcceEEeeccceEEEeecCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPA-----------PEIKWRREDNQPI----SIN---KRKKVHMHYGEQLNITKISRTE 78 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~-----------~~~~w~~~~~~~~----~~~---~~~~~~~~~~~~l~i~~v~~~d 78 (142)
....+.+.+|+.+.|.|.+.+.|. +.+.|++ ++... ... ...++ ...++.|.|.+++..|
T Consensus 13 ~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k-~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~D 90 (349)
T 4dep_C 13 TMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYW-TRQDRDLEEPINFRLPENRI-SKEKDVLWFRPTLLND 90 (349)
T ss_dssp CCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEE-EESSCCCEEECCCCCGGGCE-EEETTEEEESSCCGGG
T ss_pred eeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEE-CCCCCcccccccccccCceE-eecCCEEEEccCChhh
Confidence 356678999999999999987553 8999999 55321 111 12222 2345689999999999
Q ss_pred CeEEEEEEEec---------------------------------------------------CCccEEEEEEEecc----
Q psy15390 79 MGAYLCIATKI---------------------------------------------------GPLKIFWEIIFHMH---- 103 (142)
Q Consensus 79 ~G~y~C~~~~~---------------------------------------------------~~~~~~w~~~~~~~---- 103 (142)
+|.|+|.+.|. +.+.+.|.+.....
T Consensus 91 ~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~ 170 (349)
T 4dep_C 91 TGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFN 170 (349)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCS
T ss_pred CEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcc
Confidence 99999999864 13467886532211
Q ss_pred ----ccceEEEccCCCCCCeEEEEEEecCC-CCC--eeeEEEEEE
Q psy15390 104 ----YGEQLNITKISRTEMGAYLCIATNNV-PPS--VSKRITVDV 141 (142)
Q Consensus 104 ----~~~~l~i~~~~~~d~g~y~C~a~n~~-~~~--~s~~~~l~V 141 (142)
....|.|.+++.+|+|.|+|.|.|.. |.. .+..+.|.|
T Consensus 171 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v 215 (349)
T 4dep_C 171 NVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKV 215 (349)
T ss_dssp SEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred ceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEE
Confidence 23569999999999999999999976 432 356666655
No 116
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.72 E-value=1.7e-16 Score=89.10 Aligned_cols=94 Identities=23% Similarity=0.391 Sum_probs=67.0
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
..||.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+....... ....++
T Consensus 3 ~~~P~~~~---~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~~~~~~~~~~~~-~~~~~~------------------ 59 (99)
T 1u2h_A 3 KAPPTFKV---SLMDQSVREGQDVIMSIRVQGEPKPVVSWLR-NRQPVRPDQRRF-AEEAEG------------------ 59 (99)
T ss_dssp CEEEEEEE---CCCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCBTTEE-EEECGG------------------
T ss_pred CCCCEEEE---cCCceEecCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCCCEE-EEECCC------------------
Confidence 35788877 6778889999999999999999999999999 777654322111 111010
Q ss_pred EEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 86 ATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 86 ~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 60 ------------------~~~~L~i~~~~~~D~G~Y~C~a~N~~g~-~~~~~~l~V 96 (99)
T 1u2h_A 60 ------------------GLCRLRILAAERGDAGFYTCKAVNEYGA-RQCEARLEV 96 (99)
T ss_dssp ------------------GEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred ------------------CEEEEEEccCCcCCCEEEEEEEEECCCc-eeEEEEEEE
Confidence 0114777888888888888888888775 566666666
No 117
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.72 E-value=2.2e-16 Score=108.24 Aligned_cols=121 Identities=27% Similarity=0.496 Sum_probs=90.4
Q ss_pred CCceeEEecCCcEEEEEEE-ecCCCCeeEEEecCCc-ceecCCcceEEeeccceEEEeecCCCC-CeEEEEEEEec----
Q psy15390 17 TPSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQ-PISINKRKKVHMHYGEQLNITKISRTE-MGAYLCIATKI---- 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~~-~~~~~~~~~~~~~~~~~l~i~~v~~~d-~G~y~C~~~~~---- 89 (142)
......+.+|+.+.|.|.+ .+.|.+.+.|++ ++. .+... .+.....++.|.|.++...| .|.|+|.+.|.
T Consensus 122 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~~~~~~--~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~ 198 (404)
T 3p3y_A 122 NLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMS-SSMEPITQD--KRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHT 198 (404)
T ss_dssp CCCCEEEETTSCEEECCCCCCCSSCCEEEEEC-TTSCBCCCC--SSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCC
T ss_pred CCCCeEEccCCcEEEEeCCCCCCCCCeEEEeC-CCccccCCC--CcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccc
Confidence 3445788899999999998 778888999999 543 33322 23334456789999999999 59999998742
Q ss_pred ---------------------------------------------------CCccEEEEEEE---------eccccceEE
Q psy15390 90 ---------------------------------------------------GPLKIFWEIIF---------HMHYGEQLN 109 (142)
Q Consensus 90 ---------------------------------------------------~~~~~~w~~~~---------~~~~~~~l~ 109 (142)
+.+.+.|.+.. .....+.|.
T Consensus 199 ~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~ 278 (404)
T 3p3y_A 199 IQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALR 278 (404)
T ss_dssp EEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEE
T ss_pred eeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEE
Confidence 23467786532 112256799
Q ss_pred EccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 110 ITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 110 i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 279 i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 309 (404)
T 3p3y_A 279 ITNVSEEDSGEYFCLASNKMGS-IRHTISVRV 309 (404)
T ss_dssp ESSCCGGGCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred EccCCHhHCEEEEEEEEeCCCc-EEEEEEEEE
Confidence 9999999999999999999886 666777665
No 118
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.71 E-value=1e-16 Score=108.88 Aligned_cols=109 Identities=12% Similarity=0.180 Sum_probs=85.6
Q ss_pred EEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec------------
Q psy15390 22 AVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI------------ 89 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~------------ 89 (142)
.+.+|+++.|.|.+.+.|.+.+.|++ ++... ......|.|.+++..|+|.|+|.+.+.
T Consensus 107 ~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v 176 (363)
T 1wio_A 107 HLLQGQSLTLTLESPPGSSPSVQCRS-PRGKN---------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVV 176 (363)
T ss_dssp SEESBSCEEEEEECCTTCCCCEEEEC-SSSCE---------EEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECE
T ss_pred EEecCCCEEEEEEcCCCCCCeEEEEc-CCCcc---------cccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEE
Confidence 56789999999999888889999999 55432 234568999999999999999998864
Q ss_pred -------------------------C-------CccEEEEEEEec----------------------------cc--cce
Q psy15390 90 -------------------------G-------PLKIFWEIIFHM----------------------------HY--GEQ 107 (142)
Q Consensus 90 -------------------------~-------~~~~~w~~~~~~----------------------------~~--~~~ 107 (142)
+ .+.+.|.+.... .. ...
T Consensus 177 ~~~p~~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (363)
T 1wio_A 177 LAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLH 256 (363)
T ss_dssp ECCSCSEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCE
T ss_pred ecCCCCCCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceE
Confidence 1 356788642110 01 338
Q ss_pred EEEccCCCCCCeEEEEEEecC--CCCCeeeEEEEEE
Q psy15390 108 LNITKISRTEMGAYLCIATNN--VPPSVSKRITVDV 141 (142)
Q Consensus 108 l~i~~~~~~d~g~y~C~a~n~--~~~~~s~~~~l~V 141 (142)
|.|.+++.+|+|.|+|.|.|. .|. .+..+.|.|
T Consensus 257 L~i~~v~~~d~G~Y~C~a~n~~~~g~-~~~~~~l~V 291 (363)
T 1wio_A 257 LTLPQALPQYAGSGNLTLALEAKTGK-LHQEVNLVV 291 (363)
T ss_dssp EEESSBCGGGCEEEEEEECBTTTTCC-EEEEEEEEE
T ss_pred EEEccCCcCcCcEEEEEEEEhhhcCe-EEEEEeEEE
Confidence 999999999999999999999 884 677777776
No 119
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.71 E-value=1.5e-16 Score=89.23 Aligned_cols=94 Identities=24% Similarity=0.377 Sum_probs=67.2
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+....+..+... +
T Consensus 3 ~~~~P~i~~---~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~-~------------------ 59 (99)
T 3puc_A 3 ISSKPVIVT---GLQDTTVSSDSVAKFAVKATGEPRPTAIWTK-DGKAITQGGKYKLSED-K------------------ 59 (99)
T ss_dssp CCEEEEEEE---CCCCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECCSSSSEEEEEE-T------------------
T ss_pred CCCCCEEEe---cCccEEEeCCCcEEEEEEEEecCCCEEEEEE-CCEECcCCCCEEEEEe-C------------------
Confidence 456788887 7788899999999999999999999999999 7776643322221110 0
Q ss_pred EEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 85 IATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 85 ~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 60 -------------------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 96 (99)
T 3puc_A 60 -------------------GGFFLEIHKTDTSDSGLYTCTVKNSAGS-VSSSCKLTI 96 (99)
T ss_dssp -------------------TEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred -------------------CEEEEEECCCCcccCEEEEEEEEeCCCc-EeEEEEEEE
Confidence 0124777777778888888888887775 566666665
No 120
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.71 E-value=8.5e-17 Score=105.09 Aligned_cols=128 Identities=14% Similarity=0.181 Sum_probs=84.6
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCc-ceE-EeeccceEEEeecCCCCCeEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKR-KKV-HMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~-~~~-~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
..+|.+.. .+. ..+.+|++|+|.|.+.+ +.+.+.|++ +|..+..... .+. ....+..|.|.+++..|+|.|+
T Consensus 5 ~~kP~i~~---~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k-~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 78 (257)
T 1b6u_A 5 HRKPSLLA---HPG-PLVKSEETVILQCWSDV-RFQHFLLHR-EGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYR 78 (257)
T ss_dssp CCCCEECC---BSC-SEEESSCCEEEEEEESS-CCSEEEEEE-ESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEE
T ss_pred CCCCEEEE---cCC-CEecCCCCEEEEEecCC-CCcEEEEEE-CCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEE
Confidence 34677765 444 56889999999999864 466899999 7665432100 000 0122357999999999999999
Q ss_pred EEEEec------------------------------------------------CCccEEEEEEEec-------------
Q psy15390 84 CIATKI------------------------------------------------GPLKIFWEIIFHM------------- 102 (142)
Q Consensus 84 C~~~~~------------------------------------------------~~~~~~w~~~~~~------------- 102 (142)
|.+.+. .++.+.|.+....
T Consensus 79 C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~ 158 (257)
T 1b6u_A 79 CYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNG 158 (257)
T ss_dssp EEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSCCSEEEEEETTSSCEECCBCBCCSSS
T ss_pred EeEeccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCCCcEEEEEECCcccCcccccccccCC
Confidence 998531 1135667542110
Q ss_pred cccceEEEccCCCCCCeEEEEEEecCCC----CCeeeEEEEEE
Q psy15390 103 HYGEQLNITKISRTEMGAYLCIATNNVP----PSVSKRITVDV 141 (142)
Q Consensus 103 ~~~~~l~i~~~~~~d~g~y~C~a~n~~~----~~~s~~~~l~V 141 (142)
.....|.|.+++ |+|.|+|.|.+... ...|..+.|.|
T Consensus 159 ~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V 199 (257)
T 1b6u_A 159 TFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSV 199 (257)
T ss_dssp CCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECC
T ss_pred ceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEE
Confidence 124578999998 99999999997532 23456666655
No 121
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=6.2e-17 Score=90.97 Aligned_cols=93 Identities=28% Similarity=0.422 Sum_probs=71.1
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
.+..+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+..... . .
T Consensus 7 ~~~~~P~~~~---~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~~-~--~-------------------- 59 (99)
T 2yr3_A 7 GMEVAPSFSS---VLKDCAVIEGQDFVLQCSVRGTPVPRITWLL-NGQPIQYARS-T--C-------------------- 59 (99)
T ss_dssp CCCEEEEEEE---CCCCEEECTTCCEEEECEEEEESCCCCEEEE-SSSBCSSCCC-E--E--------------------
T ss_pred CcccCCceee---cCCCCEEeCCCeEEEEEEEeeeCCCeEEEEE-CCEECcccce-E--e--------------------
Confidence 4567889888 6778889999999999999999999999999 7776542210 0 0
Q ss_pred EEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 84 CIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 84 C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
......|.|.++..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 60 ------------------~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~V~ 99 (99)
T 2yr3_A 60 ------------------EAGVAELHIQDALPEDHGTYTCLAENALGQ-VSCSAWVTVH 99 (99)
T ss_dssp ------------------ETTEEEEEECSCCTTCCBCEEEEEECSSCE-EEEECCEEEC
T ss_pred ------------------eCCeEEEEECCCChhhCEEEEEEEEECCCe-EEEEEEEEEC
Confidence 001235888888889999999999998886 6777777775
No 122
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.71 E-value=2e-16 Score=99.78 Aligned_cols=119 Identities=19% Similarity=0.233 Sum_probs=78.8
Q ss_pred eeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec----------
Q psy15390 20 SVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI---------- 89 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~---------- 89 (142)
.+.+.+|+++.|.|.+.|.|.+.+.|++..+..+. . ..........|.|.+++..|+|.|.|.+.|.
T Consensus 10 ~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 10 RYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--G-KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--S-EEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred cEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--c-eEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 34455999999999999999999999983222221 1 1111122346999999999999999999875
Q ss_pred --------------------------------CC---ccEEEEEEE------ecc--------c--cceEEEccCCCCCC
Q psy15390 90 --------------------------------GP---LKIFWEIIF------HMH--------Y--GEQLNITKISRTEM 118 (142)
Q Consensus 90 --------------------------------~~---~~~~w~~~~------~~~--------~--~~~l~i~~~~~~d~ 118 (142)
.+ +.+.|.+.. ... . ...|.|......|.
T Consensus 87 ~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~ 166 (202)
T 1vca_A 87 EIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIG 166 (202)
T ss_dssp EEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTT
T ss_pred EEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCC
Confidence 11 257886421 111 1 12345666777788
Q ss_pred eEEEEEEecCCCCC------eeeEEEEEE
Q psy15390 119 GAYLCIATNNVPPS------VSKRITVDV 141 (142)
Q Consensus 119 g~y~C~a~n~~~~~------~s~~~~l~V 141 (142)
|.|+|+|.|..+.. .+.++.|.|
T Consensus 167 g~ytC~A~n~~~~~~~~~~~~~~~~~L~V 195 (202)
T 1vca_A 167 KVLVCRAKLHIDEMDSVPTVRQAVKELQV 195 (202)
T ss_dssp CEEEEEEEECSCCCTTSCSEEEEEEECCE
T ss_pred CeEEEEEEccccCCCCcceeEeeEEEEEE
Confidence 99999999987641 344555555
No 123
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.71 E-value=1.3e-16 Score=100.86 Aligned_cols=114 Identities=17% Similarity=0.306 Sum_probs=79.2
Q ss_pred CceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccce----------ecCCcceEEee---ccceEEEeecCCCCCeEEE
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPI----------SINKRKKVHMH---YGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~----------~~~~~~~~~~~---~~~~l~i~~v~~~d~G~y~ 83 (142)
+..+.+.+|++++|.|.+.+.+.+.+.|++.+ +..+ ......++... ....|.|.+++.+|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 56778999999999999998888889999832 2221 00111222222 1237999999999999999
Q ss_pred EEEEec-----------------------------------------------CC-ccEEEEEEEecc------------
Q psy15390 84 CIATKI-----------------------------------------------GP-LKIFWEIIFHMH------------ 103 (142)
Q Consensus 84 C~~~~~-----------------------------------------------~~-~~~~w~~~~~~~------------ 103 (142)
|.+.+. ++ +.+.|.+.....
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 998753 11 268886531110
Q ss_pred -cc------ceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 104 -YG------EQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 -~~------~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
.. ..|.|..+..+|+|.|+|.|.|...+
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 167 SKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 11 15788888899999999999997654
No 124
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.71 E-value=1e-16 Score=107.06 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=73.4
Q ss_pred EecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEE--eeccceEEEeecCCCCCeEEEEEEEec-----------
Q psy15390 23 VREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVH--MHYGEQLNITKISRTEMGAYLCIATKI----------- 89 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~--~~~~~~l~i~~v~~~d~G~y~C~~~~~----------- 89 (142)
+.+|++++|.|.+. .+.+.+.|++ ++..+......... ......|.|.+++..|+|.|+|.+.|.
T Consensus 130 v~~G~~v~L~C~~~-~~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~ 207 (316)
T 3vh8_G 130 VKSGERVILQCWSD-IMFEHFFLHK-EGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSD 207 (316)
T ss_dssp EETTCCEEEEEEES-SCCSEEEEEE-TTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCC
T ss_pred cCCCCeEEEEEcCC-CCCcEEEEEE-CCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCC
Confidence 78899999999985 4556899999 77665322111100 123457999999999999999998853
Q ss_pred -------------------------------------CCccEEEEEEEe----------ccc---cceEEEccCCCCCCe
Q psy15390 90 -------------------------------------GPLKIFWEIIFH----------MHY---GEQLNITKISRTEMG 119 (142)
Q Consensus 90 -------------------------------------~~~~~~w~~~~~----------~~~---~~~l~i~~~~~~d~g 119 (142)
+.+.+.|.+... ... ...|.|..++ |+|
T Consensus 208 ~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G 285 (316)
T 3vh8_G 208 PLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGG 285 (316)
T ss_dssp CEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESSCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------C
T ss_pred CEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCCCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCE
Confidence 123566653210 011 1568888888 999
Q ss_pred EEEEEEecCCCC----CeeeEEEEEEC
Q psy15390 120 AYLCIATNNVPP----SVSKRITVDVE 142 (142)
Q Consensus 120 ~y~C~a~n~~~~----~~s~~~~l~V~ 142 (142)
.|+|.|.|..++ ..|..+.|.|.
T Consensus 286 ~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 312 (316)
T 3vh8_G 286 TYRCFGSFRHSPYEWSDPSDPLLVSVT 312 (316)
T ss_dssp EEEEEEEBTTBTTEECCCCCCEEC---
T ss_pred EEEEEeecCCCchhccCCCCcEEEEEe
Confidence 999999997654 45777777663
No 125
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.70 E-value=5.2e-17 Score=109.17 Aligned_cols=118 Identities=17% Similarity=0.191 Sum_probs=87.6
Q ss_pred ceeEEecCCcEEEEEEEecC---------CCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCe-EEEEEEEe
Q psy15390 19 SSVAVREEFNITLTCKAEGF---------PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMG-AYLCIATK 88 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~---------~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~y~C~~~~ 88 (142)
..+.+.+|+.+.|.|.+.+. |.+.+.|++ ++..+....+. ..++.|.|.+++..|+| .|+|.+.|
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k-~~~~~~~~~~~----~~~~~L~i~~v~~~D~Gs~Y~C~a~n 111 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEK-IGKTRRPLNRR----VKNGDLWIANYTSNDSHRRYLCTVTT 111 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEE-CSSSCEECSTT----EETTEEEESSCCGGGGGCCEEEEEEC
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEE-CCCCccccCce----eecceEEEcCCChHhCCCcEEEEEEe
Confidence 46678999999999998874 557899999 77665432221 34678999999999999 99999987
Q ss_pred c-------------------------------------------C-CccEEEEEEEec---------cccceEEEccCCC
Q psy15390 89 I-------------------------------------------G-PLKIFWEIIFHM---------HYGEQLNITKISR 115 (142)
Q Consensus 89 ~-------------------------------------------~-~~~~~w~~~~~~---------~~~~~l~i~~~~~ 115 (142)
. + .+.+.|.+.... .....|.|.+++.
T Consensus 112 ~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~ 191 (329)
T 3oq3_B 112 KNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPEL 191 (329)
T ss_dssp TTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCG
T ss_pred CCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecCh
Confidence 4 3 468899753111 1256899999999
Q ss_pred CCCeEEEEEEecC--CCC-C--eeeEEEEEE
Q psy15390 116 TEMGAYLCIATNN--VPP-S--VSKRITVDV 141 (142)
Q Consensus 116 ~d~g~y~C~a~n~--~~~-~--~s~~~~l~V 141 (142)
+|+|.|+|.|.|. .|. . .+..+.|.|
T Consensus 192 ~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V 222 (329)
T 3oq3_B 192 EDSGRYDCYVHYDDVRIKNDIVVSRCKILTV 222 (329)
T ss_dssp GGCEEEEEEEEECCTTSSSCEEEEEEEEEEE
T ss_pred hhCEEEEEEEEecccCCCceeEEEeeEEEEE
Confidence 9999999999986 543 2 222355555
No 126
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.70 E-value=1.7e-16 Score=102.97 Aligned_cols=121 Identities=17% Similarity=0.303 Sum_probs=83.2
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCC-----CCeeEEEecC-Cccee----------cCCcceEEee---ccce
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFP-----APEIKWRRED-NQPIS----------INKRKKVHMH---YGEQ 68 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~-----~~~~~w~~~~-~~~~~----------~~~~~~~~~~---~~~~ 68 (142)
+|.+.. .+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. .....++... ....
T Consensus 38 ~~~~~~---~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 114 (254)
T 2c1o_A 38 ELVMTQ---SPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFT 114 (254)
T ss_dssp CCCEEE---ECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE
T ss_pred ceeEEe---CCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEE
Confidence 455555 57788999999999999998877 3789999732 33221 1111222222 1237
Q ss_pred EEEeecCCCCCeEEEEEEEec-----------------------------------------------CC-ccEEEEEEE
Q psy15390 69 LNITKISRTEMGAYLCIATKI-----------------------------------------------GP-LKIFWEIIF 100 (142)
Q Consensus 69 l~i~~v~~~d~G~y~C~~~~~-----------------------------------------------~~-~~~~w~~~~ 100 (142)
|.|.+++.+|+|.|.|.+.+. ++ +.+.|.+..
T Consensus 115 L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g 194 (254)
T 2c1o_A 115 LKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDG 194 (254)
T ss_dssp EEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESS
T ss_pred EEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECC
Confidence 999999999999999998753 11 248887532
Q ss_pred ec---c----------------ccceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 101 HM---H----------------YGEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 101 ~~---~----------------~~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
.. . ....|.|..+..+|+|.|+|.|.|....
T Consensus 195 ~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 195 SERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp SEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 11 0 0235888888999999999999997654
No 127
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.70 E-value=2.2e-17 Score=105.44 Aligned_cols=73 Identities=16% Similarity=0.328 Sum_probs=52.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCC-CeeEEEecCCc----cee----cC--CcceEE----------eeccceEEEeecC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPA-PEIKWRREDNQ----PIS----IN--KRKKVH----------MHYGEQLNITKIS 75 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~-~~~~w~~~~~~----~~~----~~--~~~~~~----------~~~~~~l~i~~v~ 75 (142)
.+..+.+.+|+++.|.|.+.+.+. +.+.|++.+.. .+. .. ...++. ...++.|.|.+++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 566788999999999999998885 78999983222 111 00 012222 3344569999999
Q ss_pred CCCCeEEEEEEEec
Q psy15390 76 RTEMGAYLCIATKI 89 (142)
Q Consensus 76 ~~d~G~y~C~~~~~ 89 (142)
..|+|.|.|.+.+.
T Consensus 86 ~~D~G~Y~C~~~~~ 99 (231)
T 2pet_A 86 VGDERDYVCVVRAG 99 (231)
T ss_dssp GGGCEEEEEEEECG
T ss_pred cccCceEEEEEEec
Confidence 99999999998754
No 128
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.70 E-value=1.1e-16 Score=91.21 Aligned_cols=95 Identities=24% Similarity=0.511 Sum_probs=72.0
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
...+|.+.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+....+..+ ..
T Consensus 11 ~~~~~~i~~---~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~g~~l~~~~~~~~----------~~----------- 65 (106)
T 1nct_A 11 TTLAARILT---KPRSMTVYEGESARFSCDTDGEPVPTVTWLR-KGQVLSTSARHQV----------TT----------- 65 (106)
T ss_dssp SSCCCEEEE---CCCCEEESSSSCEECCEEEECSSCCBCCBCS-SSSCCTTCSSEEE----------EE-----------
T ss_pred CCCCCEEEE---CCCCEEEeCCCcEEEEEEEEEcCCCEEEEEE-CCEECCCCCCEEE----------EE-----------
Confidence 446788888 7888999999999999999999999999999 7776543221111 00
Q ss_pred EEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 85 IATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 85 ~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
......|.|.++..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 66 -----------------~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~V~ 105 (106)
T 1nct_A 66 -----------------TKYKSTFEISSVQASDEGNYSVVVENSEGK-QEAEFTLTIQ 105 (106)
T ss_dssp -----------------CSSEEEEEECCCCSSCCSEEEECCBCSSCB-CCEEEEEEEC
T ss_pred -----------------CCCEEEEEECcCCchhCEEEEEEEEeCCCe-EEEEEEEEEE
Confidence 001235888899999999999999998886 6778888775
No 129
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.70 E-value=8.7e-17 Score=101.70 Aligned_cols=114 Identities=17% Similarity=0.234 Sum_probs=78.6
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee---c-------CCcceEE---eeccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS---I-------NKRKKVH---MHYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~---~-------~~~~~~~---~~~~~~l~i~~v~~~d~G~y 82 (142)
.+ .+.+.+|++++|.|.+.+.+.+.+.|++.. +.... . ....++. ......|.|.+++.+|+|.|
T Consensus 7 ~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (213)
T 3mj8_L 7 PP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADY 85 (213)
T ss_dssp CS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEE
Confidence 44 778999999999999998888899999831 11110 0 0111222 12234699999999999999
Q ss_pred EEEEEec--------------------------------------------------CC-ccEEEEEEEecc--------
Q psy15390 83 LCIATKI--------------------------------------------------GP-LKIFWEIIFHMH-------- 103 (142)
Q Consensus 83 ~C~~~~~--------------------------------------------------~~-~~~~w~~~~~~~-------- 103 (142)
.|.+.+. ++ +.+.|.+.....
T Consensus 86 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 165 (213)
T 3mj8_L 86 YCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQ 165 (213)
T ss_dssp EEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC
T ss_pred EEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCC
Confidence 9998753 11 378886521110
Q ss_pred ---------ccceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 104 ---------YGEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 ---------~~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
..+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 166 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3mj8_L 166 PSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNT 202 (213)
T ss_dssp CEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEE
T ss_pred cCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCcc
Confidence 1234778888889999999999998754
No 130
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.70 E-value=7.3e-16 Score=100.22 Aligned_cols=132 Identities=12% Similarity=0.262 Sum_probs=89.6
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Cccee---------------cCCcceEEee--c--
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQPIS---------------INKRKKVHMH--Y-- 65 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~~~---------------~~~~~~~~~~--~-- 65 (142)
+|.+.. .+..+.+.+|++++|.|.+.+. +.+.+.|++.. +..+. .....++... .
T Consensus 6 ~~~~~~---~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 82 (256)
T 3juy_B 6 HQVQLV---QSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSA 82 (256)
T ss_dssp -CCEEE---ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTT
T ss_pred ceEEEE---ecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCC
Confidence 455555 6778889999999999999873 56689999732 21110 0011222222 1
Q ss_pred -cceEEEeecCCCCCeEEEEEEEec-------------------------------------------------------
Q psy15390 66 -GEQLNITKISRTEMGAYLCIATKI------------------------------------------------------- 89 (142)
Q Consensus 66 -~~~l~i~~v~~~d~G~y~C~~~~~------------------------------------------------------- 89 (142)
..+|.|.+++.+|+|.|.|.+.+.
T Consensus 83 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (256)
T 3juy_B 83 NTAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLS 162 (256)
T ss_dssp TEEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEEC
T ss_pred CEEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEe
Confidence 125999999999999999988652
Q ss_pred --------------CC-ccEEEEEEE------e--------------------ccccceEEEccCCCCCCeEEEEEEecC
Q psy15390 90 --------------GP-LKIFWEIIF------H--------------------MHYGEQLNITKISRTEMGAYLCIATNN 128 (142)
Q Consensus 90 --------------~~-~~~~w~~~~------~--------------------~~~~~~l~i~~~~~~d~g~y~C~a~n~ 128 (142)
+. +.+.|.+.. . ......|.|.+++.+|+|.|+|.|.|.
T Consensus 163 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 242 (256)
T 3juy_B 163 PGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGA 242 (256)
T ss_dssp TTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCS
T ss_pred CCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeC
Confidence 11 467886420 0 001235899999999999999999987
Q ss_pred CCCCeeeEEEEEEC
Q psy15390 129 VPPSVSKRITVDVE 142 (142)
Q Consensus 129 ~~~~~s~~~~l~V~ 142 (142)
.....+....|.|+
T Consensus 243 ~~~~~g~gt~l~V~ 256 (256)
T 3juy_B 243 SSYTFGQGTKLERK 256 (256)
T ss_dssp SCCEECCCEEEEEC
T ss_pred CCceEcCCEEEEEC
Confidence 66556677788875
No 131
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.70 E-value=2e-16 Score=88.80 Aligned_cols=95 Identities=22% Similarity=0.437 Sum_probs=67.7
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.||.+.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+......++.....
T Consensus 4 ~pP~i~~---~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~-------------------- 59 (100)
T 3irg_A 4 IPPKIEA---LPSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHSQEQGRFHIENT-------------------- 59 (100)
T ss_dssp EEEEECC---CCSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCTTGGGTEEEEEC--------------------
T ss_pred CCCeeec---CCCcEEEcCCCcEEEEEEEEEcCCCceEEEE-CCEEeecCCCCEEEEEec--------------------
Confidence 4677766 6778899999999999999999999999999 777664322222111111
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.....|.|..+..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 60 ----------------~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~ 98 (100)
T 3irg_A 60 ----------------DDLTTLIIMDVQKQDGGLYTLSLGNEFGS-DSATVNIHIR 98 (100)
T ss_dssp ----------------SSEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred ----------------CCEEEEEEeecCcccCEEEEEEEEeCCCc-EEEEEEEEEE
Confidence 01234778888888888888888888775 6667777663
No 132
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.69 E-value=7.4e-17 Score=109.63 Aligned_cols=120 Identities=13% Similarity=0.091 Sum_probs=85.0
Q ss_pred ceeEEecCCcEEEEEEEec-----CCCCeeEEEecCCcceec--------CCcceEEe---------ec--cceEEEeec
Q psy15390 19 SSVAVREEFNITLTCKAEG-----FPAPEIKWRREDNQPISI--------NKRKKVHM---------HY--GEQLNITKI 74 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~-----~~~~~~~w~~~~~~~~~~--------~~~~~~~~---------~~--~~~l~i~~v 74 (142)
....+.+|+.+.|.|.+.+ .|.+.+.|++ +|..+.. .....+.. .. ...|.|.++
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 262 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQA-ERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQA 262 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEE-SSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSB
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEec-CCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccC
Confidence 4567888999999998877 6678899999 7776654 22222111 12 338999999
Q ss_pred CCCCCeEEEEEEEec-------------------------------CCcc--EEEEEEEec-cccceEEEccCCCCCCeE
Q psy15390 75 SRTEMGAYLCIATKI-------------------------------GPLK--IFWEIIFHM-HYGEQLNITKISRTEMGA 120 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~-------------------------------~~~~--~~w~~~~~~-~~~~~l~i~~~~~~d~g~ 120 (142)
...|+|.|.|.+.|. +++. +.|.+.... .....|.|..+..+|+|.
T Consensus 263 ~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~~~l~i~~v~~~d~G~ 342 (363)
T 1wio_A 263 LPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGM 342 (363)
T ss_dssp CGGGCEEEEEEECBTTTTCCEEEEEEEEEEEECCCSSSEEEEEESSCCTTCCEEEECSSSSCSEEESSSEEEESSCCSEE
T ss_pred CcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEecCCCeeEEEEEccccCCCccEEEEeCCCceeeeeeeeeeeecccccee
Confidence 999999999999765 2344 788754322 224457788999999999
Q ss_pred EEEEEecCCCCCeeeEEEEEE
Q psy15390 121 YLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 121 y~C~a~n~~~~~~s~~~~l~V 141 (142)
|+|.|.|.... .....|.|
T Consensus 343 Y~C~a~~~~~~--~~~~~~~V 361 (363)
T 1wio_A 343 WQCLLSDSGQV--LLESNIKV 361 (363)
T ss_dssp EEEEECSSSSC--CEEEEEEE
T ss_pred EEEEEecCCeE--EEecceEe
Confidence 99999976443 44444444
No 133
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=6.1e-16 Score=86.99 Aligned_cols=93 Identities=27% Similarity=0.450 Sum_probs=67.6
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
....+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+..... +.....
T Consensus 4 ~~~~~P~i~~---~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~-~~~~~~------------------ 60 (100)
T 2edj_A 4 GSSGPPIILQ---GPANQTLAVDGTALLKCKATGDPLPVISWLK-EGFTFPGRDP-RATIQE------------------ 60 (100)
T ss_dssp SCCSSCEEEE---CCCCEEEESSSEEEECCEEECSSCCEEEEEE-SSSEESSSCS-SCEECT------------------
T ss_pred CCCCCCEEEe---CcCCEEEcCCCcEEEEEEEEEcCCCEEEEEE-CCEECCCCCC-CEEEcC------------------
Confidence 4456888887 7788889999999999999999999999999 7766542111 101111
Q ss_pred EEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 84 CIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 84 C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 61 ---------------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 96 (100)
T 2edj_A 61 ---------------------QGTLQIKNLRISDTGTYTCVATSSSGE-TSWSAVLDV 96 (100)
T ss_dssp ---------------------TCCEEEESCCTTTCCEEEEEEECSSCC-CBCCEEEEE
T ss_pred ---------------------CCEEEEccCCcccCEEEEEEEEcCCCC-EEEEEEEEE
Confidence 234777788888888888888888775 466666665
No 134
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=9e-16 Score=88.91 Aligned_cols=94 Identities=17% Similarity=0.322 Sum_probs=65.7
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+|.+..+......+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+.. .+..+...
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~g~~l~~-~~~~~~~~---------------------- 75 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTK-GGAPLDT-SRVHVRTS---------------------- 75 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECCC-SSCEEEEC----------------------
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEE-CCEECCC-CcEEEEEC----------------------
Confidence 46777553334567889999999999999999999999999 8776641 11111100
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 76 ----------------~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~-~~~~~~l~V 113 (118)
T 2e7c_A 76 ----------------DFDTVFFVRQAARSDSGEYELSVQIENMK-DTATIRIRV 113 (118)
T ss_dssp ----------------SSEEEEEESSCCTTTCEEEEEEEECSSCE-ECCEEEEEE
T ss_pred ----------------CCeEEEEECCCChhcCEEEEEEEEeCCCe-EEEEEEEEE
Confidence 01224777888888888888888888874 566666665
No 135
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.69 E-value=2.1e-15 Score=97.46 Aligned_cols=124 Identities=17% Similarity=0.373 Sum_probs=83.2
Q ss_pred ceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEeecC
Q psy15390 19 SSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITKIS 75 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~v~ 75 (142)
....+.+|++++|.|.+.+.| .+.+.|++.+ +..+. .....++.... ..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 457889999999999999876 5689999832 21110 01112222221 2369999999
Q ss_pred CCCCeEEEEEEEec-----------------------------------------------------------CCccEEE
Q psy15390 76 RTEMGAYLCIATKI-----------------------------------------------------------GPLKIFW 96 (142)
Q Consensus 76 ~~d~G~y~C~~~~~-----------------------------------------------------------~~~~~~w 96 (142)
.+|+|.|.|.+.+. +++.+.|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEE
Confidence 99999999998653 1135777
Q ss_pred EEEE-------e-------------------ccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 97 EIIF-------H-------------------MHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 97 ~~~~-------~-------------------~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.+.. . ......|.|.+++.+|+|.|+|.|.|......+....|.|+
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 6510 0 00123589999999999999999998654444555666664
No 136
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.69 E-value=6.3e-16 Score=97.72 Aligned_cols=72 Identities=19% Similarity=0.315 Sum_probs=51.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee---cC-------CcceEEee---ccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS---IN-------KRKKVHMH---YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~---~~-------~~~~~~~~---~~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.. +..+. .. ...++... ....|.|.+++..|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3nl4_L 7 TPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATY 86 (213)
T ss_dssp ECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEE
Confidence 567788999999999999999888899999832 22111 00 01122222 223799999999999999
Q ss_pred EEEEEe
Q psy15390 83 LCIATK 88 (142)
Q Consensus 83 ~C~~~~ 88 (142)
.|.+.+
T Consensus 87 ~C~~~~ 92 (213)
T 3nl4_L 87 YCQSTY 92 (213)
T ss_dssp EEEECC
T ss_pred EEecCC
Confidence 999875
No 137
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.69 E-value=1e-15 Score=100.69 Aligned_cols=78 Identities=15% Similarity=0.297 Sum_probs=54.9
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCC-c---ceec-------CCcceEEeec---cceEEEee
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDN-Q---PISI-------NKRKKVHMHY---GEQLNITK 73 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~-~---~~~~-------~~~~~~~~~~---~~~l~i~~ 73 (142)
.+.+.. .+..+.+.+|++++|.|.+.+.+.+.+.|++.+. . .+.. ....++.... ...|.|.+
T Consensus 12 ~~~v~~---~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 88 (276)
T 3auv_A 12 DIQMTQ---SPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISS 88 (276)
T ss_dssp CCCEEE---ECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred ceeEEe---CCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEcc
Confidence 445555 5778889999999999999988888999998421 1 1110 0111222221 23799999
Q ss_pred cCCCCCeEEEEEEEe
Q psy15390 74 ISRTEMGAYLCIATK 88 (142)
Q Consensus 74 v~~~d~G~y~C~~~~ 88 (142)
++.+|+|.|.|.+.+
T Consensus 89 v~~~DsG~Y~C~~~n 103 (276)
T 3auv_A 89 LQPEDFATYYCQQHY 103 (276)
T ss_dssp CCGGGCEEEEEEECS
T ss_pred CChhhCEEEEEEEec
Confidence 999999999999864
No 138
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.69 E-value=7.2e-16 Score=98.81 Aligned_cols=115 Identities=17% Similarity=0.319 Sum_probs=79.5
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee----------cCCcceEEee---ccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS----------INKRKKVHMH---YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~----------~~~~~~~~~~---~~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.+ +.... .....++... ....|.|.+++.+|+|.|
T Consensus 30 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 109 (237)
T 3sob_L 30 SPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATY 109 (237)
T ss_dssp ECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEE
Confidence 466788999999999999998888899999832 11110 0001122211 234799999999999999
Q ss_pred EEEEEec-----------------------------------------------C-CccEEEEEEEecc-----------
Q psy15390 83 LCIATKI-----------------------------------------------G-PLKIFWEIIFHMH----------- 103 (142)
Q Consensus 83 ~C~~~~~-----------------------------------------------~-~~~~~w~~~~~~~----------- 103 (142)
.|.+.+. + .+.+.|.+.....
T Consensus 110 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 189 (237)
T 3sob_L 110 YCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ 189 (237)
T ss_dssp EEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCC
T ss_pred EEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeeccccc
Confidence 9999652 2 3578897521110
Q ss_pred --c------cceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 104 --Y------GEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 --~------~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
. ...|.|.....+|+|.|+|.|.|...+
T Consensus 190 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 190 DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp CTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred ccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 1 124667778888999999999998654
No 139
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.69 E-value=5.2e-16 Score=99.74 Aligned_cols=71 Identities=14% Similarity=0.279 Sum_probs=49.9
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee-------------cCCcceEEee----ccceEEEeecCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS-------------INKRKKVHMH----YGEQLNITKISRTE 78 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~-------------~~~~~~~~~~----~~~~l~i~~v~~~d 78 (142)
.+..+.+.+|++++|.|. .+.+.+.+.|++.+ +..+. .....++... ....|.|.+++.+|
T Consensus 6 ~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 84 (238)
T 2p1y_A 6 SPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQ 84 (238)
T ss_dssp ECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGG
T ss_pred CccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCccc
Confidence 567788999999999999 67788899999831 21110 0001122221 23479999999999
Q ss_pred CeEEEEEEEe
Q psy15390 79 MGAYLCIATK 88 (142)
Q Consensus 79 ~G~y~C~~~~ 88 (142)
+|.|.|.+.+
T Consensus 85 sG~Y~C~~~~ 94 (238)
T 2p1y_A 85 TSVYFCASGD 94 (238)
T ss_dssp CEEEEEEEEC
T ss_pred CeeEEEEEEe
Confidence 9999999864
No 140
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.68 E-value=4.3e-17 Score=109.66 Aligned_cols=119 Identities=16% Similarity=0.300 Sum_probs=87.2
Q ss_pred eeEEecCCcEEEEEE-----EecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec-----
Q psy15390 20 SVAVREEFNITLTCK-----AEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI----- 89 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~-----~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~----- 89 (142)
...+.+|+.+.|.|. +.+.|.+.+.|++ ++..+.............+.|.|.++...|+|.|+|.+.|.
T Consensus 129 ~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 207 (339)
T 3o4o_C 129 PQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYK-DSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQ 207 (339)
T ss_dssp EEEEETTSCEEEECCSCTTTCCSSSCCCBCCEE-SSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBC
T ss_pred ceEEECCCCEEEEecCCcccccCCCCceEEEec-CCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeE
Confidence 346788999999999 7888888999999 88877654333322223358999999999999999998753
Q ss_pred -------------------------------------------------C-CccEEEEEEEe------------------
Q psy15390 90 -------------------------------------------------G-PLKIFWEIIFH------------------ 101 (142)
Q Consensus 90 -------------------------------------------------~-~~~~~w~~~~~------------------ 101 (142)
+ .+.+.|.+...
T Consensus 208 ~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~ 287 (339)
T 3o4o_C 208 YNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQE 287 (339)
T ss_dssp CEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEE
T ss_pred EEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEE
Confidence 1 23566753211
Q ss_pred ccccc------eEEEccCCCCCC-eEEEEEEecCCCCCeeeEEEEE
Q psy15390 102 MHYGE------QLNITKISRTEM-GAYLCIATNNVPPSVSKRITVD 140 (142)
Q Consensus 102 ~~~~~------~l~i~~~~~~d~-g~y~C~a~n~~~~~~s~~~~l~ 140 (142)
....+ .|.|.+++.+|+ |.|+|.|.|..|. .+..+.+.
T Consensus 288 ~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~-~~~~~~~~ 332 (339)
T 3o4o_C 288 YSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSF-QTLRTTVK 332 (339)
T ss_dssp CCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEE-ECCBCCCC
T ss_pred ecccCceEEEEEEEEEEechhhcCccEEEEEEeccCc-eEEEEEhh
Confidence 11122 699999999997 9999999999986 55555443
No 141
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.68 E-value=7.9e-16 Score=99.91 Aligned_cols=126 Identities=16% Similarity=0.332 Sum_probs=84.9
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEec-CCcceec---------------CCcceEEeec-----cceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRE-DNQPISI---------------NKRKKVHMHY-----GEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~-~~~~~~~---------------~~~~~~~~~~-----~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++. .+..+.. ....++.... ...|.|.+
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 86 (253)
T 3uzq_A 7 QSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSS 86 (253)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCC
Confidence 45677899999999999988744 568999982 2221110 0011222221 12499999
Q ss_pred cCCCCCeEEEEEEEec----------------------------------------------------------CCc---
Q psy15390 74 ISRTEMGAYLCIATKI----------------------------------------------------------GPL--- 92 (142)
Q Consensus 74 v~~~d~G~y~C~~~~~----------------------------------------------------------~~~--- 92 (142)
++.+|+|.|.|.+.+. +.+
T Consensus 87 v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~ 166 (253)
T 3uzq_A 87 LTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGN 166 (253)
T ss_dssp CCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTE
T ss_pred CCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCC
Confidence 9999999999998751 112
Q ss_pred -cEEEEEEEe--------------------------ccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 93 -KIFWEIIFH--------------------------MHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 93 -~~~w~~~~~--------------------------~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.+.|.+... ......|.|.+++.+|+|.|+|.|.|..+........|.|+
T Consensus 167 ~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 167 SFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp ECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred cEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 678865210 00122599999999999999999999766556666677664
No 142
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=6.9e-18 Score=113.28 Aligned_cols=120 Identities=20% Similarity=0.329 Sum_probs=34.3
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec------
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI------ 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~------ 89 (142)
.+....+.+|+.+.|.|.+.+. |.+.+.|++ ++..+....+.. ..++.|.|.+++..|+|.|+|.+.|.
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k-~g~~~~~~~~~~---~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~ 89 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVK-DGTGLVPSERVL---VGPQRLQVLNASHEDSGAYSCRQRLTQRVLCH 89 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEE-CCeeCCCcccEE---eccceEEEeecccccCEEEEEEEEeCCeEEEE
Confidence 4667789999999999999876 567899999 777765432222 23568999999999999999988643
Q ss_pred -------------------------------------------------------------CCccEEEEEEEe-------
Q psy15390 90 -------------------------------------------------------------GPLKIFWEIIFH------- 101 (142)
Q Consensus 90 -------------------------------------------------------------~~~~~~w~~~~~------- 101 (142)
+.+.+.|.+...
T Consensus 90 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~ 169 (334)
T 1ry7_B 90 FSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHR 169 (334)
T ss_dssp -----------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSS
T ss_pred EEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccc
Confidence 113455543211
Q ss_pred ------ccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 102 ------MHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 102 ------~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
......|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 170 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 214 (334)
T 1ry7_B 170 IGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGS-IRQTYTLDV 214 (334)
T ss_dssp TTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEE-EEEEEEEEE
T ss_pred ccceecccceEEEEECCCCcccCEEEEEEEEeCCCC-EEEEEEEEE
Confidence 112347999999999999999999998875 566666655
No 143
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.4e-16 Score=91.15 Aligned_cols=97 Identities=26% Similarity=0.514 Sum_probs=67.4
Q ss_pred ccccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEE
Q psy15390 3 AYKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 3 ~~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y 82 (142)
+....+|.+.. .+..+.+.+|++++|.|.+.+.|.+.+.|++ ++..+............++
T Consensus 4 ~~~~~~P~i~~---~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~~--------------- 64 (110)
T 2dm3_A 4 GSSGFRPHFLQ---APGDLTVQEGKLCRMDCKVSGLPTPDLSWQL-DGKPVRPDSAHKMLVRENG--------------- 64 (110)
T ss_dssp SCCCCCCEEEE---CCCEEEEESSSCBCCEEEEECSSCCEEECBB-SSSBCCCCSSEEEEECTTS---------------
T ss_pred CCCCCCCcEEe---CCCcEEEeCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCCceEEEEecCC---------------
Confidence 34557899988 7888999999999999999999999999999 7776644322221111111
Q ss_pred EEEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 83 LCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 83 ~C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 65 ----------------------~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V 100 (110)
T 2dm3_A 65 ----------------------VHSLIIEPVTSRDAGIYTCIATNRAGQ-NSFSLELVV 100 (110)
T ss_dssp ----------------------CEEEEESSCCGGGCSBBCEEEECSSCE-EEECCEEEE
T ss_pred ----------------------eEEEEEeeCCcccCEEEEEEEECCCCE-EEEEEEEEE
Confidence 124677777777777777777777765 455555554
No 144
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.68 E-value=2.7e-16 Score=103.57 Aligned_cols=63 Identities=17% Similarity=0.385 Sum_probs=47.2
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEe-ec---cceEEEeecCCCCCeEEEEEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHM-HY---GEQLNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~---~~~l~i~~v~~~d~G~y~C~~~~ 88 (142)
....+.+.+|+++.|.|.+.+. +.|++ ++..+.. +... .. .+.|.|.+++..|+|.|+|.+.|
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~----v~W~~-~~~~~~~----~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 72 (289)
T 3mjg_X 6 PGPELVLNVSSTFVLTCSGSAP----VVWER-MSQEPPQ----EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHND 72 (289)
T ss_dssp SCSEEECCTTCCEEEEEEESSC----CEEEB-TTBCCSE----EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC
T ss_pred CCCeEEEeCCCcEEEEEeccce----EEEEC-CCCCccc----ceeccCCCceeEEEEEccCChhhCEEEEEEEcc
Confidence 4456788899999999998764 89999 7776521 1111 11 24799999999999999999875
No 145
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=8.4e-16 Score=87.91 Aligned_cols=95 Identities=23% Similarity=0.303 Sum_probs=64.9
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC-cceEEeeccceEEEeecCCCCCeEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK-RKKVHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
...+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.... +..+....++
T Consensus 5 ~~~~P~~~~---~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~~~~~~~~~~~~~~---------------- 64 (110)
T 2dm2_A 5 SSGAPFFEM---KLKHYKIFEGMPVTFTCRVAGNPKPKIYWFK-DGKQISPKSDHYTIQRDLDG---------------- 64 (110)
T ss_dssp CSCCCCBSS---CCCCEEEETTCCEEEEEEBCCSSCCEEEEEC-SSCBCCTTCSSEEEEECTTC----------------
T ss_pred CCCCCEEEe---cCcCeEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCCCCCeEEEEECCCc----------------
Confidence 446788877 6778889999999999999999999999999 777764321 1111111011
Q ss_pred EEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 84 CIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 84 C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 65 ---------------------~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~V 100 (110)
T 2dm2_A 65 ---------------------TCSLHTTASTLDDDGNYTIMAANPQGR-ISCTGRLMV 100 (110)
T ss_dssp ---------------------EEEEEESSCCTTTCSCCEEEEECTTCC-EEECCCEEE
T ss_pred ---------------------EEEEEECCCChhhCEEEEEEEEECCCe-EEEEEEEEE
Confidence 113677777777778888888777775 455555544
No 146
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.68 E-value=2e-16 Score=87.74 Aligned_cols=80 Identities=16% Similarity=0.336 Sum_probs=53.1
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLC 84 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C 84 (142)
.+||.+..|. ....+.+.+|+++.|.|.+.+ |.+.+.|++ +|+.+....+.++....+ ..|.|.+++.+|+|.|.|
T Consensus 2 ~~P~~i~~p~-~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k-~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C 78 (91)
T 2lvc_A 2 HMPVHIVDPR-EHVFVHAITSECVMLACEVDR-EDAPVRWYK-DGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQC 78 (91)
T ss_dssp CCCCCCCBCC-SCEEEECCTTCCEEEEEECSC-TTSCCEEEE-TTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEE
T ss_pred CCCcEEeccC-CCeEEEEECCCcEEEEEEECC-CCcEEEEEE-CCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEE
Confidence 4677777631 222345678999999999865 777899999 898887665544433222 246666666666666666
Q ss_pred EEEe
Q psy15390 85 IATK 88 (142)
Q Consensus 85 ~~~~ 88 (142)
.+.|
T Consensus 79 ~a~n 82 (91)
T 2lvc_A 79 VAGD 82 (91)
T ss_dssp ECSS
T ss_pred EEcc
Confidence 6544
No 147
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.68 E-value=5.6e-16 Score=101.95 Aligned_cols=122 Identities=19% Similarity=0.241 Sum_probs=85.0
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
+|.+.. .+..+.+.+|+++.|.|.+.+ .+.|++ ++..... ......+..|.|.+++..|+|.|.|.+.
T Consensus 4 ~p~i~~---~~~~~~v~~G~~v~L~C~~~~----~v~W~~-~~~~~~~----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 71 (289)
T 3ejj_X 4 APVIEP---SGPELVVEPGETVTLRCVSNG----SVEWDG-PISPYWT----LDPESPGSTLTTRNATFKNTGTYRCTEL 71 (289)
T ss_dssp CCEEES---CSSEEEECTTCCEEEEEECSS----CCEEEC-SCSSSSE----ECCCSSCCEEEESSCCGGGCEEEEEECC
T ss_pred CcEecC---CCceEEECCCCCEEEEEEeCC----cEEEcc-CCCceEE----EeccCCccEEEEeeeccccCEEEEEEEe
Confidence 555555 667888999999999999876 489998 5433210 0012234689999999999999999976
Q ss_pred ec-------------------------------------------CCc-cEEEEEE----------EeccccceEEEccC
Q psy15390 88 KI-------------------------------------------GPL-KIFWEII----------FHMHYGEQLNITKI 113 (142)
Q Consensus 88 ~~-------------------------------------------~~~-~~~w~~~----------~~~~~~~~l~i~~~ 113 (142)
+. +.+ .+.|.+. +.....+.|.|.++
T Consensus 72 ~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v 151 (289)
T 3ejj_X 72 EDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKA 151 (289)
T ss_dssp C-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSC
T ss_pred ccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeec
Confidence 43 112 3888641 12233567999999
Q ss_pred CCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 114 SRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 114 ~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
+.+|+|.|+|.|.|......+..+.|.|
T Consensus 152 ~~~d~G~Y~C~a~~~~~~~~~~~~~l~V 179 (289)
T 3ejj_X 152 KVLDSNTYVCKTMVNGRESTSTGIWLKV 179 (289)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccccCEEEEEEEEeCCCccccccEEEEE
Confidence 9999999999999543333556666655
No 148
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.68 E-value=3.8e-15 Score=96.95 Aligned_cols=72 Identities=18% Similarity=0.279 Sum_probs=51.2
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee-------------cCCcceEEe---eccceEEEeecCCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS-------------INKRKKVHM---HYGEQLNITKISRTEM 79 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~-------------~~~~~~~~~---~~~~~l~i~~v~~~d~ 79 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.. +..+. ...+..... ....+|.|.+++.+|+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 88 (256)
T 3tf7_C 9 PDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDS 88 (256)
T ss_dssp SCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGC
T ss_pred cCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccC
Confidence 667888999999999999999888899999832 11110 011111111 1123699999999999
Q ss_pred eEEEEEEEe
Q psy15390 80 GAYLCIATK 88 (142)
Q Consensus 80 G~y~C~~~~ 88 (142)
|.|.|.+.+
T Consensus 89 G~Y~C~~~~ 97 (256)
T 3tf7_C 89 AVYFCAVSA 97 (256)
T ss_dssp SEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999999865
No 149
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.68 E-value=2.3e-15 Score=97.91 Aligned_cols=125 Identities=13% Similarity=0.339 Sum_probs=83.0
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Ccceec---------------CCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPISI---------------NKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~~---------------~~~~~~~~~~-----~~~l~i~~v 74 (142)
+....+.+|++++|.|.+.+.+ .+.+.|++.. +..+.. ....++.... ...|.|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 3446688999999999998765 5689999732 222110 0111222221 124999999
Q ss_pred CCCCCeEEEEEEEec--------------------------------------------------------------CCc
Q psy15390 75 SRTEMGAYLCIATKI--------------------------------------------------------------GPL 92 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~--------------------------------------------------------------~~~ 92 (142)
+.+|+|.|.|.+.+. +.+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 168 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGS 168 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTT
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCc
Confidence 999999999998653 113
Q ss_pred cEEEEEEE-------e-------------------ccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 93 KIFWEIIF-------H-------------------MHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 93 ~~~w~~~~-------~-------------------~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.+.|.+.. . ......|.|.+++.+|+|.|+|.|.|...........|.|+
T Consensus 169 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~ 244 (256)
T 3umt_A 169 NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIK 244 (256)
T ss_dssp CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEE
Confidence 67775420 0 00122499999999999999999998655555666777764
No 150
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.67 E-value=5.1e-16 Score=88.28 Aligned_cols=94 Identities=26% Similarity=0.414 Sum_probs=65.7
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+....+.. ...++
T Consensus 10 ~~~~P~~~~---~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~--~~~~~----------------- 66 (107)
T 3irg_B 10 QGSPPCFLR---FPRPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASERLS--FPADG----------------- 66 (107)
T ss_dssp CCEEEEEEE---CCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEE--CCEET-----------------
T ss_pred CCCCCeeEc---CCccEEEeCCCeEEEEEEEeecCCCEEEEEE-CCeECCCCCcEE--EEeCC-----------------
Confidence 446888887 7788899999999999999999999999999 777664322111 11111
Q ss_pred EEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 85 IATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 85 ~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 67 -------------------~~~~L~i~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V 103 (107)
T 3irg_B 67 -------------------AEHGLLLTAALPTDAGVYVCRARNAAGE-AYAAAAVTV 103 (107)
T ss_dssp -------------------TEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred -------------------CEEEEEEccCCHHhCEEEEEEEEcCCCc-EEEEEEEEE
Confidence 0114677777777777777777777765 455566655
No 151
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.67 E-value=4.2e-16 Score=88.80 Aligned_cols=48 Identities=27% Similarity=0.522 Sum_probs=33.6
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceec
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI 55 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~ 55 (142)
.+..+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+..
T Consensus 6 ~~~~~P~~~~---~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~ 53 (108)
T 3kvq_A 6 LERVAPTITG---NLENQTTSIGESIEVSCTASGNPPPQIMWFK-DNETLVE 53 (108)
T ss_dssp -----CCCBS---CCCCEEEETTCCEEEECBCC----CCEEEEE-SSSBCCC
T ss_pred CccCCCceec---CCCCeEEeCCCeEEEEEECcCcCCCeEEEEE-CCeEccc
Confidence 4456888877 6778889999999999999998989999999 7766543
No 152
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.67 E-value=4.4e-17 Score=108.32 Aligned_cols=123 Identities=16% Similarity=0.228 Sum_probs=84.5
Q ss_pred CCceeEEecCCcEEEEEEE-ecCCCCeeEEEecCCcceecCCcce--EEeeccceEEEeecCCCCCeEEEEEEEec----
Q psy15390 17 TPSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQPISINKRKK--VHMHYGEQLNITKISRTEMGAYLCIATKI---- 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~--~~~~~~~~l~i~~v~~~d~G~y~C~~~~~---- 89 (142)
.+.......|+.+.|.|.+ .+.|.+.+.|++ ++..+....... ......+.|.|.++...|.|.|+|.+.|.
T Consensus 120 ~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~-~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~ 198 (308)
T 4fom_A 120 GPDSLIDGGNETVAAICIAATGKPVAHIDWEG-DLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEK 198 (308)
T ss_dssp CSSCCCTTCSCEEEEEEEEEEEBSCCEEEECC-CSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred ccceeEEcCCceEEEEEEecCCcCCceEEEEE-CCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCC
Confidence 3444455678999999975 578889999999 776653221100 00111236899999999999999999874
Q ss_pred -----------------------------------------CCc-cEEEEEEE-------eccccceEEEccCCCCCCeE
Q psy15390 90 -----------------------------------------GPL-KIFWEIIF-------HMHYGEQLNITKISRTEMGA 120 (142)
Q Consensus 90 -----------------------------------------~~~-~~~w~~~~-------~~~~~~~l~i~~~~~~d~g~ 120 (142)
+++ .+.|.+.. .......+.|..++.+|+|.
T Consensus 199 ~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 278 (308)
T 4fom_A 199 DIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGV 278 (308)
T ss_dssp CEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSE
T ss_pred ceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEE
Confidence 122 46675421 11223345577899999999
Q ss_pred EEEEEecCCCCCeeeEEEEEE
Q psy15390 121 YLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 121 y~C~a~n~~~~~~s~~~~l~V 141 (142)
|+|.|.|..|. .+..+.|.|
T Consensus 279 Y~C~A~N~~G~-~~~~~~l~V 298 (308)
T 4fom_A 279 YICKVTNSLGQ-RSDQKVIYI 298 (308)
T ss_dssp EEEEEEETTEE-EEEEEECCE
T ss_pred EEEEEEeCCCc-EEEEEEEEE
Confidence 99999999996 567777666
No 153
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.67 E-value=8.1e-15 Score=94.83 Aligned_cols=72 Identities=15% Similarity=0.347 Sum_probs=51.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee----------cCCcceEEeec---cceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS----------INKRKKVHMHY---GEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~----------~~~~~~~~~~~---~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.+ +.... .....++.... ...|.|.+++.+|+|.|
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (250)
T 3esu_F 10 STSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTY 89 (250)
T ss_dssp SCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred cCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEE
Confidence 567788999999999999999888899999832 11110 00011221111 22699999999999999
Q ss_pred EEEEEe
Q psy15390 83 LCIATK 88 (142)
Q Consensus 83 ~C~~~~ 88 (142)
.|.+.+
T Consensus 90 ~C~~~n 95 (250)
T 3esu_F 90 FCQQGN 95 (250)
T ss_dssp EEEECS
T ss_pred EEEEee
Confidence 999854
No 154
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.67 E-value=1.3e-16 Score=105.14 Aligned_cols=123 Identities=16% Similarity=0.217 Sum_probs=87.9
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEE-eeccceEEEeecCCCCCeEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVH-MHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~l~i~~v~~~d~G~y~C 84 (142)
..+|.+.. .+..+.+.+|+++.|.|.+.+. +.|++ ++... .... ....+.|.|.+++..|+|.|.|
T Consensus 2 ~~~P~i~~---~~~~~~v~~G~~v~L~C~~~~~----v~W~~-~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C 68 (292)
T 4dkd_C 2 GSIPVIEP---SVPELVVKPGATVTLRCVGNGS----VEWDG-PPSPH-----WTLYSDGSSSILSTNNATFQNTGTYRC 68 (292)
T ss_dssp --CCEEES---CCSSCEECTTCCEEEEEECSSC----CCBCC-CCCSS-----CEECCBTTEEEEEESSCCGGGCSCEEE
T ss_pred CCCceecC---CCCeEEEcCCCcEEEEEcCCCc----eEEcc-CCCCc-----eEEeccCceEEEEEcccccccCEEEEE
Confidence 36788877 6777899999999999998763 89997 43321 1111 1123479999999999999999
Q ss_pred EEEec------------------------------------------CC--ccEEEEEE----------EeccccceEEE
Q psy15390 85 IATKI------------------------------------------GP--LKIFWEII----------FHMHYGEQLNI 110 (142)
Q Consensus 85 ~~~~~------------------------------------------~~--~~~~w~~~----------~~~~~~~~l~i 110 (142)
.+.|. +. +.+.|.+. ........|.|
T Consensus 69 ~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i 148 (292)
T 4dkd_C 69 TEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTI 148 (292)
T ss_dssp CCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEE
T ss_pred EEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccCCceEEE
Confidence 98763 11 46888652 12222445899
Q ss_pred ccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 111 TKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 111 ~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.+++.+|+|.|+|.|.|..+...+..+.|.|
T Consensus 149 ~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V 179 (292)
T 4dkd_C 149 HRAKFIQSQDYQCSALMGGRKVMSISIRLKV 179 (292)
T ss_dssp TTCCGGGCSEEEEEECSTTSCEECCCEEEEE
T ss_pred CCCCHHHCeEEEEEEEeCCCceeEEEEEEEE
Confidence 9999999999999999887764555666665
No 155
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.67 E-value=1.2e-15 Score=108.11 Aligned_cols=120 Identities=16% Similarity=0.262 Sum_probs=84.6
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCC--eeEEEecCCcceecCCcceE-Eeec------cceEEEeecCCC
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAP--EIKWRREDNQPISINKRKKV-HMHY------GEQLNITKISRT 77 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~-~~~~------~~~l~i~~v~~~ 77 (142)
.+|.+.. .+....+.+|+.+.|.|.+.+.+.+ .+.|++ +|+.+........ .... .+.|.|.+++..
T Consensus 113 ~~P~~~~---~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~ 188 (523)
T 2rcj_C 113 ANPTVTL---FPPSSEELQANKATLVCLISDFYPGAVTVAWKA-DGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWK 188 (523)
T ss_pred cCCeEEe---cCCcccccCCCceEEEEEeccccCCceEEEEec-CCCCCCCceEeccccccCCCCEEEEEEEEEechhcC
Confidence 4566554 4455566789999999999987654 899999 8887754321110 0111 135999999999
Q ss_pred CCeEEEEEEEec-----------------------------------------------CCc-cEEEEEEEec-------
Q psy15390 78 EMGAYLCIATKI-----------------------------------------------GPL-KIFWEIIFHM------- 102 (142)
Q Consensus 78 d~G~y~C~~~~~-----------------------------------------------~~~-~~~w~~~~~~------- 102 (142)
|+|.|+|.+.|. +.+ .+.|.+....
T Consensus 189 d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~ 268 (523)
T 2rcj_C 189 SHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFP 268 (523)
T ss_pred CCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCC
Confidence 999999999863 113 6788653211
Q ss_pred ---cc------cceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 103 ---HY------GEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 103 ---~~------~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
.. .+.|.|..+..+| |.|+|.|.|..|.
T Consensus 269 ~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~ 305 (523)
T 2rcj_C 269 AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 305 (523)
T ss_pred cEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCC
Confidence 01 1378899999999 9999999999886
No 156
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.67 E-value=1.7e-15 Score=83.88 Aligned_cols=83 Identities=20% Similarity=0.403 Sum_probs=58.3
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
++.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+.... ..
T Consensus 3 ~~~i~~---~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~--------~~-------------------- 50 (91)
T 3bfo_A 3 KLQICV---EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTHET--------KK-------------------- 50 (91)
T ss_dssp CCEEEE---CCCCEEECTTSCEEEECEEECSSCCEEEEEE-TTEECTTCC--------SS--------------------
T ss_pred ceEEEE---CCCccEecCCCcEEEEEEeccCCCCEEEEEc-CCeeCCcCC--------CC--------------------
Confidence 456666 6777889999999999999999999999999 776543221 12
Q ss_pred ecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 88 KIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 88 ~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.|.|.+++.+|+|.|+|.|.|..|...+..+.|.|
T Consensus 51 -------------------~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 85 (91)
T 3bfo_A 51 -------------------LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII 85 (91)
T ss_dssp -------------------EEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred -------------------eEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEEEE
Confidence 35666666667777777777666654445555554
No 157
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.67 E-value=1.4e-16 Score=107.60 Aligned_cols=119 Identities=22% Similarity=0.306 Sum_probs=72.4
Q ss_pred CceeEEecCCcEEEEEEE-----ecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec---
Q psy15390 18 PSSVAVREEFNITLTCKA-----EGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI--- 89 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~-----~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~--- 89 (142)
+....+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+... .++ ...+..|.|.+++..|+|.|+|.+.|.
T Consensus 127 ~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k-~~~~l~~~--~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g 202 (349)
T 4dep_C 127 PVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYM-GCYKIQNF--NNV-IPEGMNLSFLIALISNNGNYTCVVTYPENG 202 (349)
T ss_dssp CEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEE-TTEECCSC--SSE-EEETTEEEEESCCGGGCEEEEEEEEEEETT
T ss_pred CcceeeecCccEEEEcCCCcccccCCCCceEEEee-CCEECCCc--cce-eecCCEEEEeeeeecCCcEEEEEEEEeeCC
Confidence 345578889999999985 667888999999 88877432 221 233467999999999999999998763
Q ss_pred -------------------------------------------------------CCccEEEEEEEec------------
Q psy15390 90 -------------------------------------------------------GPLKIFWEIIFHM------------ 102 (142)
Q Consensus 90 -------------------------------------------------------~~~~~~w~~~~~~------------ 102 (142)
+.+.+.|.+....
T Consensus 203 ~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~ 282 (349)
T 4dep_C 203 RTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINE 282 (349)
T ss_dssp EEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCE
T ss_pred EEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCcccccc
Confidence 1134566421100
Q ss_pred -------c---ccceEEEccCCCCCC-eEEEEEEecCCCCCeeeEEEEEE
Q psy15390 103 -------H---YGEQLNITKISRTEM-GAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 103 -------~---~~~~l~i~~~~~~d~-g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
. ....|.|.+++.+|+ |.|+|.|.|..|. .+..+.|.|
T Consensus 283 ~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~-~~~~~~l~v 331 (349)
T 4dep_C 283 SISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGE-VAKAAKVKQ 331 (349)
T ss_dssp EEECCTTCCEEEEECC-------------CEEEEECSSCE-EEEECC---
T ss_pred ceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCc-EEEEEEEee
Confidence 0 012388899999999 9999999999986 455555554
No 158
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.66 E-value=1.8e-15 Score=97.76 Aligned_cols=125 Identities=15% Similarity=0.172 Sum_probs=80.3
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCe-----eEEEecCCcceec--------C------CcceEE----eeccceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPE-----IKWRREDNQPISI--------N------KRKKVH----MHYGEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~-----~~w~~~~~~~~~~--------~------~~~~~~----~~~~~~l~i~~ 73 (142)
.+....+.+|++++|.|.+.+.|.+. +.|++.+...... . .+.++. ...+.+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 45567888999999999998877665 9999842211100 0 000000 01123599999
Q ss_pred cCCCCCeEEEEEEEec------------------------------------------CCc-cEEEEEEEe---------
Q psy15390 74 ISRTEMGAYLCIATKI------------------------------------------GPL-KIFWEIIFH--------- 101 (142)
Q Consensus 74 v~~~d~G~y~C~~~~~------------------------------------------~~~-~~~w~~~~~--------- 101 (142)
++..|+|.|.|.+.+. +.+ .+.|.+...
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~ 168 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEIS 168 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEEC
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccc
Confidence 9999999999998754 334 789976431
Q ss_pred ---------ccc------cceEEEccCCCCCCeEEEEEEecCCCC-CeeeEEEEEE
Q psy15390 102 ---------MHY------GEQLNITKISRTEMGAYLCIATNNVPP-SVSKRITVDV 141 (142)
Q Consensus 102 ---------~~~------~~~l~i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~V 141 (142)
... ...|.+......|.|.|+|.|.|..+. ..+..+.|.|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 169 EDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp TTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 111 124666777888999999999998765 3555555554
No 159
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.66 E-value=1.1e-15 Score=96.67 Aligned_cols=72 Identities=15% Similarity=0.329 Sum_probs=51.6
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccce---ec-------CCcceEEee---ccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPI---SI-------NKRKKVHMH---YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~---~~-------~~~~~~~~~---~~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.+ +... .. ....++... ....|.|.+++.+|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3r06_A 7 SPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSY 86 (213)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEE
T ss_pred CCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEE
Confidence 577788999999999999999888899999832 1111 00 011122221 223799999999999999
Q ss_pred EEEEEe
Q psy15390 83 LCIATK 88 (142)
Q Consensus 83 ~C~~~~ 88 (142)
.|.+.+
T Consensus 87 ~C~~~~ 92 (213)
T 3r06_A 87 YCQQYY 92 (213)
T ss_dssp EEEECS
T ss_pred EEeccc
Confidence 999965
No 160
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.66 E-value=2.9e-15 Score=107.34 Aligned_cols=123 Identities=18% Similarity=0.272 Sum_probs=86.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCC---eeEEEecCCccee-----c-------CCcceEEeec---c--ceEEEeecCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAP---EIKWRREDNQPIS-----I-------NKRKKVHMHY---G--EQLNITKISR 76 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~---~~~w~~~~~~~~~-----~-------~~~~~~~~~~---~--~~l~i~~v~~ 76 (142)
.++.+.+.+|+.+.|.|.+.+.+.+ .+.|++ ++..+. . ....++.... + ..|.|.+++.
T Consensus 6 ~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~ 84 (585)
T 2ocw_A 6 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCR-QGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ 84 (585)
T ss_pred CcceeEEecCCcEEEEEeCCCCcCCCcccEEEEe-CCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCc
Confidence 5667889999999999999887543 789999 654221 0 0112222221 2 3699999999
Q ss_pred CCCeEEEEEEEec-------------------------------------------CCccEEEEEEEe------------
Q psy15390 77 TEMGAYLCIATKI-------------------------------------------GPLKIFWEIIFH------------ 101 (142)
Q Consensus 77 ~d~G~y~C~~~~~-------------------------------------------~~~~~~w~~~~~------------ 101 (142)
.|+|.|+|.+.+. +++.+.|.+...
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~ 164 (585)
T 2ocw_A 85 DDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGY 164 (585)
T ss_pred ccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcc
Confidence 9999999998754 124688865321
Q ss_pred ----------cc-ccc-----eEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 102 ----------MH-YGE-----QLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 102 ----------~~-~~~-----~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.. ... .|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|
T Consensus 165 ~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V 219 (585)
T 2ocw_A 165 VNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNS-NKKNADLQV 219 (585)
T ss_pred cCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCcc-ccceEEEEE
Confidence 00 011 6999999999999999999998876 566677666
No 161
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.66 E-value=1.1e-15 Score=92.46 Aligned_cols=80 Identities=25% Similarity=0.510 Sum_probs=52.8
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc--ceEEEeecCCCCCeEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG--EQLNITKISRTEMGAY 82 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~l~i~~v~~~d~G~y 82 (142)
+..+|.|.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....+..+....+ ..|.|.+++..|+|.|
T Consensus 38 v~~~P~~~~---~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 113 (154)
T 1fhg_A 38 PHVKPYFTK---TILDMEVVEGSAARFDCKVEGYPDPEVMWFK-DDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKY 113 (154)
T ss_dssp CCEEEEEEE---CCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEE
T ss_pred CCCCCeEEc---cCCcEEEeCCCeEEEEEEEEEecCCEEEEEE-CCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEE
Confidence 446788887 6778899999999999999999999999999 887765433322221111 2344444444444444
Q ss_pred EEEEEe
Q psy15390 83 LCIATK 88 (142)
Q Consensus 83 ~C~~~~ 88 (142)
+|.+.|
T Consensus 114 ~C~a~N 119 (154)
T 1fhg_A 114 TCKAVN 119 (154)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444443
No 162
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.66 E-value=7.1e-16 Score=97.75 Aligned_cols=71 Identities=17% Similarity=0.283 Sum_probs=49.8
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEecC-Ccce--------------ecCCcceEEee---ccceEEEeecCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRRED-NQPI--------------SINKRKKVHMH---YGEQLNITKISRT 77 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~~-~~~~--------------~~~~~~~~~~~---~~~~l~i~~v~~~ 77 (142)
.+ .+.+.+|++++|.|.+.+. +.+.+.|++.. +... ......++... ....|.|.+++..
T Consensus 7 ~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (218)
T 3s96_B 7 SS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPE 85 (218)
T ss_dssp CS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcc
Confidence 44 7789999999999999998 88899999832 1111 00001122211 2246999999999
Q ss_pred CCeEEEEEEEe
Q psy15390 78 EMGAYLCIATK 88 (142)
Q Consensus 78 d~G~y~C~~~~ 88 (142)
|+|.|.|.+.+
T Consensus 86 D~G~Y~C~~~~ 96 (218)
T 3s96_B 86 DEAIYICGVGD 96 (218)
T ss_dssp GCEEEEEEEEE
T ss_pred cCEEEEEEEec
Confidence 99999999854
No 163
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.66 E-value=3.2e-15 Score=96.10 Aligned_cols=72 Identities=21% Similarity=0.334 Sum_probs=51.0
Q ss_pred CCceeEEecCCcEEEEEEEecCC----CCeeEEEecC-Cccee---c-------CCcceEEeec---cceEEEeecCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP----APEIKWRRED-NQPIS---I-------NKRKKVHMHY---GEQLNITKISRTE 78 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~----~~~~~w~~~~-~~~~~---~-------~~~~~~~~~~---~~~l~i~~v~~~d 78 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. . ....++.... ...|.|.+++.+|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (240)
T 1moe_A 7 SPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADD 86 (240)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhh
Confidence 56678899999999999998887 6789999842 22111 0 0111222221 1269999999999
Q ss_pred CeEEEEEEEe
Q psy15390 79 MGAYLCIATK 88 (142)
Q Consensus 79 ~G~y~C~~~~ 88 (142)
+|.|.|.+.+
T Consensus 87 ~G~Y~C~~~n 96 (240)
T 1moe_A 87 VATYYCQQTN 96 (240)
T ss_dssp CEEEEEEECS
T ss_pred CEEEEEEEcc
Confidence 9999999875
No 164
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.66 E-value=6.4e-15 Score=95.96 Aligned_cols=125 Identities=14% Similarity=0.376 Sum_probs=84.2
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---c------------CCcceEEeec-----cceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---I------------NKRKKVHMHY-----GEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---~------------~~~~~~~~~~-----~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. . ....++.... ...|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 35567889999999999998765 5689999832 22110 0 0112222221 24799999
Q ss_pred cCCCCCeEEEEEEEec-----------------------------------------------CCc-----cEEEEEEE-
Q psy15390 74 ISRTEMGAYLCIATKI-----------------------------------------------GPL-----KIFWEIIF- 100 (142)
Q Consensus 74 v~~~d~G~y~C~~~~~-----------------------------------------------~~~-----~~~w~~~~- 100 (142)
++.+|+|.|.|.+.+. +++ .+.|.+..
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~ 165 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKP 165 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECT
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECC
Confidence 9999999999998742 112 78897620
Q ss_pred ------ec-------------------cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 101 ------HM-------------------HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 101 ------~~-------------------~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.. .....|.|.+++.+|+|.|+|.|.|......+....|.|
T Consensus 166 g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V 231 (256)
T 1nqb_A 166 GQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEI 231 (256)
T ss_dssp TSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred CCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEE
Confidence 00 012368999999999999999999865443445555655
No 165
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.66 E-value=2.3e-16 Score=97.19 Aligned_cols=114 Identities=13% Similarity=0.170 Sum_probs=75.8
Q ss_pred eeEEecCCcEEEEEEEecCCCCeeEEEecCCcceec-C---------CcceEEee-ccceEEEeecCCCCCeEEEEEEEe
Q psy15390 20 SVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI-N---------KRKKVHMH-YGEQLNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~-~---------~~~~~~~~-~~~~l~i~~v~~~d~G~y~C~~~~ 88 (142)
.+.+.+|++|+|.|.+. .|.+.+.|++ ++..+.. . .+.++... .+++|.|.+++..|+|.|.|.+.+
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~-~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKK-QKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEE-TTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEe-CCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeC
Confidence 56788999999999985 4778999999 5543211 0 11233332 456899999999999999999864
Q ss_pred c-----------------------------------CCccEEEEEEE---eccccceEEEccCCCCCCeEEEEEEecCCC
Q psy15390 89 I-----------------------------------GPLKIFWEIIF---HMHYGEQLNITKISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 89 ~-----------------------------------~~~~~~w~~~~---~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~ 130 (142)
. +.+.+.|.+.. .......+.+ ...+|+|.|+|.|.|..+
T Consensus 82 ~~~~~~~~L~V~~~~~~p~i~~~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~--~~~~~~g~Y~C~a~N~~~ 159 (171)
T 1ccz_A 82 ITDTMKFFLYVLEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSY--QWTNLRAPFKCKAVNRVS 159 (171)
T ss_dssp CCSCEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEE--ECSCCSSCEEEEEEETTE
T ss_pred CCCcEEEEEEEECcCCCCEEEEecCCcEEEEEeCCCCCcEEEEEECCEECcCCcceEEEE--eccCCCceEEEEEEcccC
Confidence 3 23567775421 1111222332 347789999999999987
Q ss_pred CCeeeEEE
Q psy15390 131 PSVSKRIT 138 (142)
Q Consensus 131 ~~~s~~~~ 138 (142)
. .+..+.
T Consensus 160 ~-~~~~~~ 166 (171)
T 1ccz_A 160 Q-ESEMEV 166 (171)
T ss_dssp E-EEEEEC
T ss_pred c-ccceeE
Confidence 6 344443
No 166
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.66 E-value=5.6e-16 Score=102.97 Aligned_cols=123 Identities=15% Similarity=0.245 Sum_probs=80.3
Q ss_pred ceeEEecCCcEEEEEEEecC-CCCeeEEEecCCccee--------------cCCcceEEe----eccceEEEeecCCCCC
Q psy15390 19 SSVAVREEFNITLTCKAEGF-PAPEIKWRREDNQPIS--------------INKRKKVHM----HYGEQLNITKISRTEM 79 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~~~~~~~--------------~~~~~~~~~----~~~~~l~i~~v~~~d~ 79 (142)
..+.+.+|++++|.|.+.+. +.+.+.|++.++.... .....++.. ..+.+|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 34678899999999998654 3446999983322110 001111111 1234699999999999
Q ss_pred eEEEEEEEec----------------------------------------------CCccEEEEEEE--------ecc--
Q psy15390 80 GAYLCIATKI----------------------------------------------GPLKIFWEIIF--------HMH-- 103 (142)
Q Consensus 80 G~y~C~~~~~----------------------------------------------~~~~~~w~~~~--------~~~-- 103 (142)
|.|+|.+.+. +.+.+.|.+.. ...
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~ 166 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNE 166 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTS
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeee
Confidence 9999998764 34577785321 111
Q ss_pred ---ccceEEEccCCCCCCeEEEEEEecCCCC-CeeeEEEEEE
Q psy15390 104 ---YGEQLNITKISRTEMGAYLCIATNNVPP-SVSKRITVDV 141 (142)
Q Consensus 104 ---~~~~l~i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~V 141 (142)
..+.|.|..+...|+|.|+|.|.|..+. ..+..+.|.|
T Consensus 167 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V 208 (308)
T 4fom_A 167 TATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDI 208 (308)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCC
T ss_pred cccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEE
Confidence 1235888899999999999999997665 3444555444
No 167
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=1.2e-15 Score=90.89 Aligned_cols=113 Identities=14% Similarity=0.165 Sum_probs=67.7
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceec-------CCcc--e-EEeeccceEEEeecCCC
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI-------NKRK--K-VHMHYGEQLNITKISRT 77 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~-------~~~~--~-~~~~~~~~l~i~~v~~~ 77 (142)
.+.+..+...+..+.+.+|+++.|.|.+.|.|.|.+.|++ ++..... .... . ......+.-. +. .
T Consensus 15 ~~~~~~~~~~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~-~ 89 (139)
T 1gxe_A 15 KIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQK-AITQGNKAPARPAPDAPEDTGDSDEWVFDKKL---LC-E 89 (139)
T ss_dssp CSCCSSSCCCCCEEEESSSSCCCCEEECCSBSCCEEEEEE-ECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCC---CC-S
T ss_pred CceEecCcCCCCCEEEeCCCeEEEEEEEEEcCCCeEEEEE-CCccccccccccccccccccccccccccccee---ec-C
Confidence 3444444445778899999999999999999999999999 5521100 0000 0 0000000000 00 0
Q ss_pred CCeEEEEEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 78 EMGAYLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 78 d~G~y~C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
+.+.|.- ........|.|.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 90 ~~~r~~i---------------~~~~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~-~~~~~~L~V 137 (139)
T 1gxe_A 90 TEGRVRV---------------ETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGE-DQVNLTVKV 137 (139)
T ss_dssp CSSSCEE---------------EEETTEEEEECSCCCTTTCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred CCCeEEE---------------EeCCCEEEEEECCCCcccCEEEEEEEEeCCce-EEEEEEEEE
Confidence 0000000 00111246899999999999999999999995 678888877
No 168
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=1.1e-15 Score=86.17 Aligned_cols=46 Identities=22% Similarity=0.302 Sum_probs=38.2
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK 57 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~ 57 (142)
..||.|.. .+....+.+|+++.|.|.+ .|.+.+.|++ +|..+....
T Consensus 5 ~~p~~~~~---~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k-~g~~l~~~~ 50 (100)
T 2yuz_A 5 SSGLKILT---PLTDQTVNLGKEICLKCEI--SENIPGKWTK-NGLPVQESD 50 (100)
T ss_dssp SCCCCCSB---CCCCEEEETTSCCCEEEEC--SSCCCEEEEE-TTEECCCCS
T ss_pred CCCCEEec---cCCceEEcCCCCEEEEEEe--CCCCeEEEEE-CCEECCCCC
Confidence 45778877 7788899999999999999 6788999999 888775443
No 169
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.65 E-value=1.1e-15 Score=95.90 Aligned_cols=118 Identities=14% Similarity=0.235 Sum_probs=78.3
Q ss_pred eeEEecCCcEEEEEEEec----CCCCeeEEEecCCcceecC----------CcceE--EeeccceEEEeecCCCCCeEEE
Q psy15390 20 SVAVREEFNITLTCKAEG----FPAPEIKWRREDNQPISIN----------KRKKV--HMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~----~~~~~~~w~~~~~~~~~~~----------~~~~~--~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
.+.+.+|+++.|.|.+.+ .+.+.+.|++ ++..+... ...+. ....+.+|.|.+++..|+|.|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~-~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQK-EKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEE-TTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEe-CCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEE
Confidence 467889999999999853 3556899999 77665210 01111 1223468999999999999999
Q ss_pred EEEEec-----------------------------------------------CCccEEEEEEE----------ecccc-
Q psy15390 84 CIATKI-----------------------------------------------GPLKIFWEIIF----------HMHYG- 105 (142)
Q Consensus 84 C~~~~~-----------------------------------------------~~~~~~w~~~~----------~~~~~- 105 (142)
|.+.+. +.+.+.|.+.. .....
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~ 161 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPET 161 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTT
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCC
Confidence 999872 33567776421 11111
Q ss_pred ceEE---EccCCCCCCeEEEEEEecCCCCCeeeEEEE
Q psy15390 106 EQLN---ITKISRTEMGAYLCIATNNVPPSVSKRITV 139 (142)
Q Consensus 106 ~~l~---i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l 139 (142)
+.+. +..+..+|.|.|+|.|.|..+. .+..+.+
T Consensus 162 ~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~-~s~~~~~ 197 (201)
T 1dr9_A 162 ELYAVSSKLDFNMTTNHSFMCLIKYGHLR-VNQTFNW 197 (201)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEEEETTCC-EEEEEEE
T ss_pred cEEEEEEEEEEEecCCCEEEEEEecCcce-eeeEEec
Confidence 2222 2345568999999999999886 5655543
No 170
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.65 E-value=4.5e-15 Score=84.71 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=67.7
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCC---CeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPA---PEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
..|.|.. .+..+.+.+|++++|.|.+.+.|. +.+.|++ ++....... .+..+.+.........
T Consensus 3 p~p~f~~---~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k-~~~~~~~~~-------~~~~~~~~~~~~~~~~--- 68 (108)
T 3cx2_A 3 PIGLFVM---RPQDGEVTVGGSITFSARVAGASLLKPPVVKWFK-GKWVDLSSK-------VGQHLQLHDSYDRASK--- 68 (108)
T ss_dssp CCCSCSB---CCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEE-TTTEEGGGG-------CBTTEEEEEEEETTTT---
T ss_pred CccEEEe---CCCcEEEeCCCCEEEEEEECCCccCCCcEEEEcc-CCccccccc-------CCceEEEeeEEecccc---
Confidence 3567776 778889999999999999999887 8999999 552111100 0001111100000000
Q ss_pred EEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 84 CIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 84 C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 69 -------------------~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~L~V~ 107 (108)
T 3cx2_A 69 -------------------VYLFELHITDAQPAFTGSYRCEVSTKDKF-DCSNFNLTVH 107 (108)
T ss_dssp -------------------EEEEEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEEE
T ss_pred -------------------cceEEEEEecCCCccCEEEEEEEecCCCc-eEEEEEEEEe
Confidence 01235899999999999999999999986 6888888773
No 171
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.65 E-value=7e-15 Score=82.21 Aligned_cols=86 Identities=15% Similarity=0.262 Sum_probs=60.6
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIF 95 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~ 95 (142)
.+..+.+.+|+++.|.|.+.+. |.+.+.|++ ++..+....+..+.. .++
T Consensus 7 ~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~-~~~~~~~~~~~~~~~-~~~---------------------------- 56 (97)
T 2bk8_A 7 QIMHAVGEEGGHVKYVCKIENYDQSTQVTWYF-GVRQLENSEKYEITY-EDG---------------------------- 56 (97)
T ss_dssp CCCCEEECTTCCEEEEEEEESCCTTCEEEEEE-TTEECCSSSSEEEEE-ETT----------------------------
T ss_pred cCcCEEEcCCCcEEEEEEEeccCCCCEEEEEE-CCEECcCCCCEEEEE-cCC----------------------------
Confidence 5667889999999999999996 888999999 777654332211111 010
Q ss_pred EEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 96 WEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 96 w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 57 ---------~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~ 93 (97)
T 2bk8_A 57 ---------VAILYVKDITKLDDGTYRCKVVNDYGE-DSSYAELFVK 93 (97)
T ss_dssp ---------EEEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEET
T ss_pred ---------eEEEEEecCChhhCeEEEEEEECCCCe-EeEEEEEEEE
Confidence 124777788888888888888888775 5566666664
No 172
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.65 E-value=1.3e-15 Score=101.50 Aligned_cols=124 Identities=15% Similarity=0.246 Sum_probs=81.9
Q ss_pred CCceeEEecCCcEEEEEEEecCCCC-----eeEEEecCCcceec-----------CCcceEEe--------eccceEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAP-----EIKWRREDNQPISI-----------NKRKKVHM--------HYGEQLNIT 72 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~-----~~~w~~~~~~~~~~-----------~~~~~~~~--------~~~~~l~i~ 72 (142)
.|..+.+..|++++|.|.+.+.+.+ .+.|++ ++..... ....+... ..+.+|.|.
T Consensus 6 ~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~ 84 (313)
T 4fqp_A 6 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWAR-HGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMF 84 (313)
T ss_dssp CCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEE-TTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEEC
T ss_pred CCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEE-CCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEEC
Confidence 5667778899999999999876654 488999 6543210 01111111 122469999
Q ss_pred ecCCCCCeEEEEEEEec--------------------------------------------CCccEEEEEE---------
Q psy15390 73 KISRTEMGAYLCIATKI--------------------------------------------GPLKIFWEII--------- 99 (142)
Q Consensus 73 ~v~~~d~G~y~C~~~~~--------------------------------------------~~~~~~w~~~--------- 99 (142)
+++.+|+|.|.|.+.+. +.+.+.|.+.
T Consensus 85 ~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~ 164 (313)
T 4fqp_A 85 GLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQ 164 (313)
T ss_dssp SCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEE
T ss_pred cCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccce
Confidence 99999999999987532 3467888642
Q ss_pred Eeccc------cceEEEccCCCCCCeEEEEEEecCCCC-CeeeEEEEEE
Q psy15390 100 FHMHY------GEQLNITKISRTEMGAYLCIATNNVPP-SVSKRITVDV 141 (142)
Q Consensus 100 ~~~~~------~~~l~i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~V 141 (142)
..... .+.|.+......|+|.|+|.|.|..+. ..+..+.|.|
T Consensus 165 ~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V 213 (313)
T 4fqp_A 165 VPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTV 213 (313)
T ss_dssp EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCB
T ss_pred eeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeeccc
Confidence 11111 124777788889999999999997654 2344454443
No 173
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.65 E-value=8.8e-15 Score=95.12 Aligned_cols=72 Identities=15% Similarity=0.333 Sum_probs=49.1
Q ss_pred CCceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Ccceec--------------CCcceEEeec-----cceEEEeec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQPISI--------------NKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~~~~--------------~~~~~~~~~~-----~~~l~i~~v 74 (142)
.+....+.+|++++|.|.+.+. +.+.+.|++.. +..... ....++.... ...|.|.++
T Consensus 14 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 93 (257)
T 3gkz_A 14 ESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSV 93 (257)
T ss_dssp EECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCC
Confidence 4556678999999999999884 46789999832 111100 0112222221 126999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 94 ~~~DsG~Y~C~~~n 107 (257)
T 3gkz_A 94 SSEDTATYYCSYFD 107 (257)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred ChhhCEEEEEEEec
Confidence 99999999999875
No 174
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.65 E-value=3.5e-15 Score=99.02 Aligned_cols=113 Identities=17% Similarity=0.254 Sum_probs=82.1
Q ss_pred CCceeEEecCCcEEEEEEEe-cCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEEEEEEEec-----
Q psy15390 17 TPSSVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAYLCIATKI----- 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y~C~~~~~----- 89 (142)
....+.+.+|+++.|.|.+. +.|.+.+.|++ ++..+....+..+.... ...|.|.+++..|+|.|+|.+.|.
T Consensus 7 ~~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k-~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~ 85 (312)
T 2y23_A 7 KEVVVNVDDDGVISLNFECDKMTPKSEFSWSK-DYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS 85 (312)
T ss_dssp CCCEEEECTTCCEEEEEECSSCCTTCCEEEEE-TTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE
T ss_pred cceeEEEecCCeEEEEEEEeCCCCCcEEEEEE-CCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE
Confidence 44567889999999999885 46778999999 88877655444432221 247999999999999999998752
Q ss_pred --------------------------------------------------CCccEEEEEEEec--------------ccc
Q psy15390 90 --------------------------------------------------GPLKIFWEIIFHM--------------HYG 105 (142)
Q Consensus 90 --------------------------------------------------~~~~~~w~~~~~~--------------~~~ 105 (142)
+.+.+.|.+.... ...
T Consensus 86 s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~ 165 (312)
T 2y23_A 86 SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGI 165 (312)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTE
T ss_pred EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCE
Confidence 2346677542110 111
Q ss_pred ceEEEccCCCCCCeEEEEEEecCCC
Q psy15390 106 EQLNITKISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 106 ~~l~i~~~~~~d~g~y~C~a~n~~~ 130 (142)
..|.|.+++.+|+|.|+|.|.|..+
T Consensus 166 ~~L~i~~~~~~d~G~Y~C~~~~~~~ 190 (312)
T 2y23_A 166 IEMFMEKLQDEDEGTYTFQLQDGKA 190 (312)
T ss_dssp EEEEESCCCGGGCEEEEEEEESSSC
T ss_pred EEEEEccCCcccCEeEEEEEEeCCc
Confidence 2389999999999999999987543
No 175
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.65 E-value=3.7e-16 Score=97.21 Aligned_cols=114 Identities=13% Similarity=0.118 Sum_probs=74.6
Q ss_pred CceeEEecCCcEEEEEEEec--CCCCeeEEEec-CCcceec--------CCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 18 PSSVAVREEFNITLTCKAEG--FPAPEIKWRRE-DNQPISI--------NKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~--~~~~~~~w~~~-~~~~~~~--------~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
...+...+|++|+|.|.... .+.+.+.|++. ++..+.. ....+.....+++|.|.+++..|+|.|.|.+
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSI 85 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEE
Confidence 35567889999999995422 34568999982 2333310 1123334456678999999999999999998
Q ss_pred Eec---------------------------------------CCccEEEEEEEec--cccceEEEccCCCCCCeEEEEEE
Q psy15390 87 TKI---------------------------------------GPLKIFWEIIFHM--HYGEQLNITKISRTEMGAYLCIA 125 (142)
Q Consensus 87 ~~~---------------------------------------~~~~~~w~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a 125 (142)
.|. +.+.+.|.+.... .....+.+ ....+|+|.|+|.|
T Consensus 86 ~n~~g~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l~~~~~~i~~-~~~~~d~G~Y~C~a 164 (182)
T 1hnf_A 86 YDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLKLSQRVITH-KWTTSLSAKFKCTA 164 (182)
T ss_dssp EETTSCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEEEEESSCEEE-ECCSCEEEEEEEEE
T ss_pred EeCCCceeEEEEEEEEEcCcCCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEECCCCCcEEEE-ecccCCCcEEEEEE
Confidence 763 2245666542111 11222333 33578999999999
Q ss_pred ecCCCCC
Q psy15390 126 TNNVPPS 132 (142)
Q Consensus 126 ~n~~~~~ 132 (142)
.|..+..
T Consensus 165 ~N~~~~~ 171 (182)
T 1hnf_A 165 GNKVSKE 171 (182)
T ss_dssp ECSSCEE
T ss_pred EeCCCCc
Confidence 9998863
No 176
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.65 E-value=1.3e-15 Score=84.84 Aligned_cols=77 Identities=12% Similarity=0.067 Sum_probs=54.0
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C~ 85 (142)
.+|.|.. .+....+.+|+++.|.|.+.+ +.+.+.|++ +|..+....+.++....+ ..|.|.++..+|+|.|+|.
T Consensus 4 ~~~~~~~---~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k-~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~ 78 (93)
T 1waa_A 4 ALIEVEK---PLYGVEVFVGETAHFEIELSE-PDVHGQWKL-KGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQ 78 (93)
T ss_dssp CCCCEEE---CCCCEEEETTSCEEEEEEESS-SSCCCEEEE-TTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCcEeec---cCcceEEeCCCCEEEEEEECC-CCCeEEEEE-CCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEE
Confidence 4778877 778889999999999999976 447899999 888876554433322211 2466666666666666665
Q ss_pred EEe
Q psy15390 86 ATK 88 (142)
Q Consensus 86 ~~~ 88 (142)
+.|
T Consensus 79 a~n 81 (93)
T 1waa_A 79 AAN 81 (93)
T ss_dssp ETT
T ss_pred ECC
Confidence 544
No 177
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.65 E-value=1.6e-16 Score=100.52 Aligned_cols=114 Identities=17% Similarity=0.242 Sum_probs=78.9
Q ss_pred CceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee----------cCCcceEEee---ccceEEEeecCCCCCeEEE
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS----------INKRKKVHMH---YGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~----------~~~~~~~~~~---~~~~l~i~~v~~~d~G~y~ 83 (142)
+..+.+.+|++++|.|.+.+.+.+.+.|++.. +..+. .....++... ....|.|.+++.+|+|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 56778899999999999887777789999832 33221 0001222222 2237999999999999999
Q ss_pred EEEEe--c------------------------------------------------CC-ccEEEEEEEecc---------
Q psy15390 84 CIATK--I------------------------------------------------GP-LKIFWEIIFHMH--------- 103 (142)
Q Consensus 84 C~~~~--~------------------------------------------------~~-~~~~w~~~~~~~--------- 103 (142)
|.+.| . ++ +.+.|.+.....
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 165 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKP 165 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCc
Confidence 99984 1 12 478887532110
Q ss_pred ---c-----cceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 104 ---Y-----GEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 ---~-----~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
. .+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 166 SKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp BCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred eecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 0 123678888889999999999998765
No 178
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.65 E-value=2.4e-15 Score=97.97 Aligned_cols=78 Identities=14% Similarity=0.204 Sum_probs=43.7
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccce---ecCC--------------cceEE---eecc
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPI---SINK--------------RKKVH---MHYG 66 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~---~~~~--------------~~~~~---~~~~ 66 (142)
+|.+.. .+..+.+.+|++++|.|.+.+.+.+.+.|++.. +... .... +.... ....
T Consensus 2 s~~v~~---~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 78 (259)
T 3omz_A 2 SSNLEG---RTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKN 78 (259)
T ss_dssp ------------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CC
T ss_pred cccccc---CCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCe
Confidence 345555 667788999999999999998888899999831 1111 0000 00000 0122
Q ss_pred ceEEEeecCCCCCeEEEEEEEe
Q psy15390 67 EQLNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 67 ~~l~i~~v~~~d~G~y~C~~~~ 88 (142)
..|.|.+++.+|+|.|.|.+.+
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~ 100 (259)
T 3omz_A 79 LRMILRNLIENDSGVYYCATWD 100 (259)
T ss_dssp CEEEESSCCGGGCEEEEEEEEC
T ss_pred EEEEECCCCcccCEEEEEEEee
Confidence 3699999999999999999864
No 179
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.64 E-value=8.4e-16 Score=88.85 Aligned_cols=99 Identities=29% Similarity=0.555 Sum_probs=66.6
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCc---ceEEeeccceEEEeecCCCCCeE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKR---KKVHMHYGEQLNITKISRTEMGA 81 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~---~~~~~~~~~~l~i~~v~~~d~G~ 81 (142)
+..||.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+..... .......++.+.+.
T Consensus 6 ~~~pP~i~~---~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 72 (117)
T 2v9t_A 6 EDFPPRIVE---HPSDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVETDKDDPRSHRMLLPSGSLFFL--------- 72 (117)
T ss_dssp CCEEEEEEE---CCCCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCCTTTCSSCSEEECTTSCEEES---------
T ss_pred ccCCCeeEc---CCCCEEEcCCCcEEEEEECCccCCCeEEEEE-CCEeccccCCCCcceeEEecCCcEEEE---------
Confidence 456888887 6778889999999999999999999999999 7776543210 01011111111111
Q ss_pred EEEEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 82 YLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 82 y~C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.+.+.+++.+|+|.|+|.|.|..|...+..+.|.|
T Consensus 73 -------------------------~i~~~~v~~~D~G~Y~C~a~N~~G~~~s~~~~l~~ 107 (117)
T 2v9t_A 73 -------------------------RIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEV 107 (117)
T ss_dssp -------------------------SCCCBTTBCSSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -------------------------EEEeCCCCcCcCEEEEEEEEeCccceEeeeEEEEh
Confidence 12223557888999999999988876666666655
No 180
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.64 E-value=3.4e-16 Score=104.83 Aligned_cols=123 Identities=13% Similarity=0.265 Sum_probs=81.9
Q ss_pred CCceeEEecCCcEEEEEEEecC----CCCeeEEEecCCcc---------------eecCCcceEEee----ccceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF----PAPEIKWRREDNQP---------------ISINKRKKVHMH----YGEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~----~~~~~~w~~~~~~~---------------~~~~~~~~~~~~----~~~~l~i~~ 73 (142)
.+..+.+.+|+++.|.|.+.+. +.+.+.|++ ++.. .......++... .+.+|.|.+
T Consensus 20 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k-~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 98 (331)
T 3u83_A 20 VNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQK-STNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSR 98 (331)
T ss_dssp -CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEE-EETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECS
T ss_pred cCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEE-cCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcc
Confidence 6677889999999999998775 344699999 4311 111111222221 245799999
Q ss_pred cCCCCCeEEEEEEE-ec------------------------------------------------CCccEEEEEE-----
Q psy15390 74 ISRTEMGAYLCIAT-KI------------------------------------------------GPLKIFWEII----- 99 (142)
Q Consensus 74 v~~~d~G~y~C~~~-~~------------------------------------------------~~~~~~w~~~----- 99 (142)
++..|+|.|.|.+. +. +.+.+.|.+.
T Consensus 99 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~ 178 (331)
T 3u83_A 99 LELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEA 178 (331)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEE
T ss_pred cCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCcc
Confidence 99999999999843 21 2346777641
Q ss_pred ---Eeccc------cceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 100 ---FHMHY------GEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 100 ---~~~~~------~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
..... ...|.|..+...|+|.|+|.|.|..+. .+..+.|.|
T Consensus 179 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~-~~~~~~l~V 228 (331)
T 3u83_A 179 EYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDR-FKESLTLNV 228 (331)
T ss_dssp EEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEE-EEEEEECCE
T ss_pred ccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCc-ceeeEEEEE
Confidence 01111 234677777999999999999998775 566665554
No 181
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.64 E-value=3.2e-15 Score=100.21 Aligned_cols=72 Identities=22% Similarity=0.445 Sum_probs=53.2
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEecCCccee----c-C--CcceEEe--------eccceEEEeecCCCCCe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRREDNQPIS----I-N--KRKKVHM--------HYGEQLNITKISRTEMG 80 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~~~~~~~----~-~--~~~~~~~--------~~~~~l~i~~v~~~d~G 80 (142)
.+..+.+.+|+++.|.|.+.+. |.+.+.|++ ++.... . . ...++.. .....|.|.+++.+|+|
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k-~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G 87 (327)
T 2wng_A 9 PDKSVSVAAGESAILHCTVTSLIPVGPIQWFR-GAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAG 87 (327)
T ss_dssp CCSEEEEETTSCEEECCEESCCCSCCCEEEEE-SCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCE
T ss_pred CCCceEEecCCcEEEEEEccCcCCCceEEEEE-CCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCe
Confidence 6778899999999999999887 778999999 654321 0 0 0112111 22347999999999999
Q ss_pred EEEEEEEec
Q psy15390 81 AYLCIATKI 89 (142)
Q Consensus 81 ~y~C~~~~~ 89 (142)
.|+|.+.|.
T Consensus 88 ~Y~C~a~n~ 96 (327)
T 2wng_A 88 TYYCVKFRK 96 (327)
T ss_dssp EEEEEEEES
T ss_pred EEEEEeecC
Confidence 999998753
No 182
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.64 E-value=5.6e-15 Score=91.63 Aligned_cols=113 Identities=17% Similarity=0.174 Sum_probs=76.0
Q ss_pred CCceeEEecCCcEEEEEEEec-CCCCeeEEEecCCccee------------cCCcceEEe-eccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQPIS------------INKRKKVHM-HYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~~~------------~~~~~~~~~-~~~~~l~i~~v~~~d~G~y 82 (142)
....+.+.+|++++|.|...+ .+.+.+.|++.++..+. ...+.|... ..+++|.|.+++.+|+|.|
T Consensus 5 ~~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 5 SVPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp SCCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEE
T ss_pred ccceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEE
Confidence 445678999999999998754 33568999983222111 111134444 4556899999999999999
Q ss_pred EEEEEec------------------------------------CCccEEEEEEE---eccccceEEEccCCCCCCeEEEE
Q psy15390 83 LCIATKI------------------------------------GPLKIFWEIIF---HMHYGEQLNITKISRTEMGAYLC 123 (142)
Q Consensus 83 ~C~~~~~------------------------------------~~~~~~w~~~~---~~~~~~~l~i~~~~~~d~g~y~C 123 (142)
.|.+.+. +.+.+.|.+.. .......+.+. . .+|+|.|+|
T Consensus 85 ~C~v~~~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~gp~p~i~W~~~~~~l~~~~~~~l~~~-~-~~d~g~Y~C 162 (180)
T 2dru_A 85 YMRMLHETEDQWKITMEVYEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQ-W-TNLRAPFKC 162 (180)
T ss_dssp EEEEESSSEEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSSCTTCEEEEEETTEEEEEESSSEEEEE-C-SCCSSCEEE
T ss_pred EEEEEcCCeEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCCCCCCEEEEEECCeECcCCCCCEEEEE-E-hhcCccEEE
Confidence 9996543 23567786421 11223345552 2 789999999
Q ss_pred EEecCCCC
Q psy15390 124 IATNNVPP 131 (142)
Q Consensus 124 ~a~n~~~~ 131 (142)
.|.|..+.
T Consensus 163 ~a~N~~~~ 170 (180)
T 2dru_A 163 KAVNRVSQ 170 (180)
T ss_dssp EEEETTEE
T ss_pred EEecCcCc
Confidence 99999875
No 183
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.64 E-value=9e-16 Score=102.89 Aligned_cols=118 Identities=14% Similarity=0.253 Sum_probs=74.7
Q ss_pred eEEecCCcEEEEEEEecCCCC--eeEEEecCCcceecCCcceEE------eeccceEEEeecCCCCCeEEEEEEEec---
Q psy15390 21 VAVREEFNITLTCKAEGFPAP--EIKWRREDNQPISINKRKKVH------MHYGEQLNITKISRTEMGAYLCIATKI--- 89 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~------~~~~~~l~i~~v~~~d~G~y~C~~~~~--- 89 (142)
..+.+|+.+.|.|.+.+.|.+ .+.|++ +|+.+......... ....+.|.|......|.|.|+|.+.|.
T Consensus 127 ~~~~~g~~~~l~C~~~g~p~~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 127 ARATPQHTVSFTCESHGFSPRDITLKWFK-NGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp SCBCTTCEEEEEEEEEEEBSSCCEEEEEE-TTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred cccCCCCEEEEEEEEeCccCCCcEEEEEE-CCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 457889999999999987655 899999 88877543211110 111224667766667789999999863
Q ss_pred ------------------------------------------CCc--cEEEEEEEe-----------cccc------ceE
Q psy15390 90 ------------------------------------------GPL--KIFWEIIFH-----------MHYG------EQL 108 (142)
Q Consensus 90 ------------------------------------------~~~--~~~w~~~~~-----------~~~~------~~l 108 (142)
+++ .+.|.+... .... ..|
T Consensus 206 ~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L 285 (327)
T 2wng_A 206 GDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWL 285 (327)
T ss_dssp SCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEE
T ss_pred CCcccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEE
Confidence 112 588864211 1111 246
Q ss_pred EEccCCCCCCeEEEEEEecCCCCCeeeEEEE
Q psy15390 109 NITKISRTEMGAYLCIATNNVPPSVSKRITV 139 (142)
Q Consensus 109 ~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l 139 (142)
.|..+..+|+|.|+|.|.|..+..++..+.+
T Consensus 286 ~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~~ 316 (327)
T 2wng_A 286 LVNVSAHRDDVKLTCQVEHDGQPAVSKSHDL 316 (327)
T ss_dssp EC-------CCEEEEEEEETTCCCEEEEEEC
T ss_pred EEccccccCCCEEEEEEEeCCCCCchhheEE
Confidence 7778888999999999999998877776654
No 184
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.64 E-value=2.1e-15 Score=97.83 Aligned_cols=115 Identities=18% Similarity=0.324 Sum_probs=78.0
Q ss_pred CCceeEEecCCcEEEEEEEecCC-----CCeeEEEecC-Ccce---e-------cCCcceEEeec---cceEEEeecCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP-----APEIKWRRED-NQPI---S-------INKRKKVHMHY---GEQLNITKISRT 77 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~-----~~~~~w~~~~-~~~~---~-------~~~~~~~~~~~---~~~l~i~~v~~~ 77 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+ . .....++.... ...|.|.+++.+
T Consensus 40 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 119 (252)
T 3bkj_L 40 TPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAE 119 (252)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcc
Confidence 46778899999999999998877 5789999832 2211 0 01112222221 237999999999
Q ss_pred CCeEEEEEEEec-----------------------------------------------CC-ccEEEEEEEec-------
Q psy15390 78 EMGAYLCIATKI-----------------------------------------------GP-LKIFWEIIFHM------- 102 (142)
Q Consensus 78 d~G~y~C~~~~~-----------------------------------------------~~-~~~~w~~~~~~------- 102 (142)
|+|.|.|.+.+. ++ ..+.|.+....
T Consensus 120 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 199 (252)
T 3bkj_L 120 DLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 199 (252)
T ss_dssp GCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEE
T ss_pred cCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeee
Confidence 999999998653 11 25888652110
Q ss_pred ------ccc------ceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 103 ------HYG------EQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 103 ------~~~------~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
..+ ..|.|..+..+|+|.|+|.|.|....
T Consensus 200 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 200 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred ecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 011 23778888888999999999987544
No 185
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.64 E-value=1.5e-17 Score=122.15 Aligned_cols=120 Identities=17% Similarity=0.258 Sum_probs=0.0
Q ss_pred eEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEE-------------------e--eccceEEEeecCCCCC
Q psy15390 21 VAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVH-------------------M--HYGEQLNITKISRTEM 79 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-------------------~--~~~~~l~i~~v~~~d~ 79 (142)
..+.+|+++.|.|.+.+.|.+.+.|++ ++..+......... . .....|.|.+++..|+
T Consensus 559 ~~~~~G~~v~l~C~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 637 (772)
T 3v2a_R 559 MQPTEQESVSLWCTADRSTFENLTWYK-LGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQ 637 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCceEEEEeccCCCCCCcEEEE-cCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCC
Confidence 457789999999999999888999999 65544221111100 0 0112499999999999
Q ss_pred eEEEEEEEec----------------------------------------------CCccEEEEEEEec----------c
Q psy15390 80 GAYLCIATKI----------------------------------------------GPLKIFWEIIFHM----------H 103 (142)
Q Consensus 80 G~y~C~~~~~----------------------------------------------~~~~~~w~~~~~~----------~ 103 (142)
|.|.|.+.|. +.+.+.|.+.... .
T Consensus 638 G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~ 717 (772)
T 3v2a_R 638 GDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD 717 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcC
Confidence 9999999873 3357888653211 1
Q ss_pred ccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 104 YGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 104 ~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
..+.|.|.++..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 718 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~V~ 755 (772)
T 3v2a_R 718 GNRNLTIRRVRKEDEGLYTCQACSVLGC-AKVEAFFIIE 755 (772)
T ss_dssp ---------------------------------------
T ss_pred CCcEEEECcCCHHHCEEEEEEEEeCCcc-eeEEEEEEEE
Confidence 2567999999999999999999999997 5667777663
No 186
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.64 E-value=3.1e-15 Score=86.50 Aligned_cols=48 Identities=25% Similarity=0.553 Sum_probs=40.8
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceec
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI 55 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~ 55 (142)
....+|.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+..
T Consensus 11 ~~~~~p~f~~---~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~~~~~~~ 58 (116)
T 2kkq_A 11 EHKRAPMFIY---KPQSKKVLEGDSVKLECQISAIPPPKLFWKR-NNEMVQF 58 (116)
T ss_dssp CCCBCCCBSS---CCCCEEEETTEEEEEEEEBCCBSCCEEEEEE-TTEECCC
T ss_pred CCCCCCeEEe---CCCcEEEeCCCcEEEEEEEeccCCCEEEEEE-CCEECcC
Confidence 3456888887 7888999999999999999999999999999 7776643
No 187
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.64 E-value=1.6e-15 Score=95.90 Aligned_cols=113 Identities=16% Similarity=0.231 Sum_probs=76.7
Q ss_pred CceeEEecCCcEEEEEEEecCC---CCeeEEEecC-Cccee----------cCCcceEEee---ccceEEEeecCCCCCe
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP---APEIKWRRED-NQPIS----------INKRKKVHMH---YGEQLNITKISRTEMG 80 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~---~~~~~w~~~~-~~~~~----------~~~~~~~~~~---~~~~l~i~~v~~~d~G 80 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. .....++... ....|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 5567889999999999998876 3689999832 22220 0111222222 1237999999999999
Q ss_pred EEEEEEEec------------------------------------------------CC-ccEEEEEEEec---------
Q psy15390 81 AYLCIATKI------------------------------------------------GP-LKIFWEIIFHM--------- 102 (142)
Q Consensus 81 ~y~C~~~~~------------------------------------------------~~-~~~~w~~~~~~--------- 102 (142)
.|.|.+.+. ++ ..+.|.+....
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 166 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQ 166 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCC
Confidence 999998753 11 26888652110
Q ss_pred ---cc------cceEEEccCCCCCCeEEEEEEecCCC
Q psy15390 103 ---HY------GEQLNITKISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 103 ---~~------~~~l~i~~~~~~d~g~y~C~a~n~~~ 130 (142)
.. ...|.|..+..+|+|.|+|.|.|...
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (212)
T 1q0x_L 167 PSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGH 203 (212)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTE
T ss_pred ceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCc
Confidence 01 12477878888999999999998754
No 188
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.63 E-value=9.1e-16 Score=96.92 Aligned_cols=67 Identities=12% Similarity=0.270 Sum_probs=47.5
Q ss_pred eeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee---c-------CCcceEE---eeccceEEEeecCCCCCeEEEEE
Q psy15390 20 SVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS---I-------NKRKKVH---MHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~---~-------~~~~~~~---~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
.+.+.+|++++|.|.+. +.+.+.|++.+ +..+. . ....++. ......|.|.+++.+|+|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 77899999999999998 77799999831 22211 0 0111222 11234799999999999999999
Q ss_pred EEe
Q psy15390 86 ATK 88 (142)
Q Consensus 86 ~~~ 88 (142)
+.+
T Consensus 87 ~~~ 89 (211)
T 3tv3_L 87 SLV 89 (211)
T ss_dssp EEE
T ss_pred Eec
Confidence 876
No 189
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.63 E-value=6.2e-15 Score=83.49 Aligned_cols=96 Identities=19% Similarity=0.283 Sum_probs=64.3
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
|.+||.+... .. ...|..+.|.|.+.|.|.|.+.|++ +|+.+............. . .
T Consensus 1 V~~pP~i~~~---~~---~~~~~~~~~~c~v~G~P~P~i~W~k-~g~~l~~~~~~~~~~~~~--------~---~----- 57 (103)
T 1wwb_X 1 VHFAPTITFL---ES---PTSDHHWCIPFTVKGNPKPALQWFY-NGAILNESKYICTKIHVT--------N---H----- 57 (103)
T ss_dssp CCCCCCCCCC---CC---CCCCCEEEEEEEEECSSCCEEEEEE-TTEEECCCSSEEEEEEEE--------C---S-----
T ss_pred CCCCCEEEec---cC---ceECcEEEEEEEEEEeCCCEEEEEE-CCEECCCCCcEeEEEEec--------C---C-----
Confidence 4578886542 11 2458889999999999999999999 888775442211111000 0 0
Q ss_pred EEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 85 IATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 85 ~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 58 -----------------~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~~~~l~V 96 (103)
T 1wwb_X 58 -----------------TEYHGCLQLDNPTHMNNGDYTLIAKNEYGK-DEKQISAHF 96 (103)
T ss_dssp -----------------SEEEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEEECC
T ss_pred -----------------cEEEEEEEECCCCcccCEEEEEEEEeCCCc-EeEEEEEEE
Confidence 001234888888889999999999998886 677777665
No 190
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.63 E-value=5.5e-15 Score=93.66 Aligned_cols=114 Identities=16% Similarity=0.261 Sum_probs=75.8
Q ss_pred CceeEEecCCcEEEEEEE-ecCC-CCeeEEEecC-Cccee----------cCCcceEEee---ccceEEEeecCCCCCeE
Q psy15390 18 PSSVAVREEFNITLTCKA-EGFP-APEIKWRRED-NQPIS----------INKRKKVHMH---YGEQLNITKISRTEMGA 81 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~-~~~~-~~~~~w~~~~-~~~~~----------~~~~~~~~~~---~~~~l~i~~v~~~d~G~ 81 (142)
+..+.+.+|++++|.|.+ .+.+ .+.+.|++.+ +..+. .....++... ....|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 566789999999999995 4442 5689999832 22211 1111122222 12379999999999999
Q ss_pred EEEEEEec------------------------------------------------CC-ccEEEEEEEec----------
Q psy15390 82 YLCIATKI------------------------------------------------GP-LKIFWEIIFHM---------- 102 (142)
Q Consensus 82 y~C~~~~~------------------------------------------------~~-~~~~w~~~~~~---------- 102 (142)
|.|.+.+. ++ ..+.|.+....
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 99998752 11 26888752111
Q ss_pred ---ccc------ceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 103 ---HYG------EQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 103 ---~~~------~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
..+ +.|.|..+..+|+|.|+|.|.|....
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 011 15778888889999999999997644
No 191
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.62 E-value=2.3e-15 Score=84.59 Aligned_cols=94 Identities=20% Similarity=0.410 Sum_probs=63.5
Q ss_pred CCeeeecC-CCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcce-EEeeccceEEEeecCCCCCeEEEEE
Q psy15390 8 PPNILDTE-STPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKK-VHMHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 8 ~p~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
||.|..+. ..+..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+....... ....
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~--------------------- 61 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQEHRIGGYKVR--------------------- 61 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEE-TTEECCGGGSTTCCEEE---------------------
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEE-CCEEcccccccccEEEe---------------------
Confidence 56665421 12456788899999999999999999999999 777654322110 0000
Q ss_pred EEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 86 ATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 86 ~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 62 -----------------~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~V 99 (100)
T 3caf_A 62 -----------------NQHWSLIMESVVPSDKGNYTCVVENEYGS-INHTYHLDV 99 (100)
T ss_dssp -----------------GGGTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred -----------------cCeEEEEEccCCcCCCEEEEEEEEeCCCE-EEEEEEEEE
Confidence 11235777778888888888888888775 566666665
No 192
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.62 E-value=1e-14 Score=101.46 Aligned_cols=80 Identities=13% Similarity=0.093 Sum_probs=59.4
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCC---eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAP---EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGA 81 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~---~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 81 (142)
+..+|.+... .+....+.+|+++.|.|.+.+.+.+ .+.|++ ++..+....... ...++.|.|.++...|+|.
T Consensus 82 V~~~P~~~~~--~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k-~g~~l~~~~~~~--~~~~~~L~i~~~~~~d~G~ 156 (450)
T 1z7z_I 82 VYWTPERVEL--APLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR-GEKELKREPAVG--EPAEVTTTVLVRRDHHGAN 156 (450)
T ss_dssp EEBCCSEEEE--CCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE-TTEEEEEEECCT--TTEEEEEEEECCSSCSSCE
T ss_pred EEeCCCccee--cCCCceEeeCCeEEEEEEecCCCCCcCcEEEEee-CCEEeecccccc--cccceEEEEEeeccccCce
Confidence 3446666532 5566778999999999999998877 899999 888775332110 1123479999999999999
Q ss_pred EEEEEEec
Q psy15390 82 YLCIATKI 89 (142)
Q Consensus 82 y~C~~~~~ 89 (142)
|+|.+.|.
T Consensus 157 Y~C~a~n~ 164 (450)
T 1z7z_I 157 FSCRTELD 164 (450)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcc
Confidence 99998854
No 193
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.62 E-value=5.8e-16 Score=99.19 Aligned_cols=115 Identities=16% Similarity=0.311 Sum_probs=63.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccce---e-------cCCcceEEe---eccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPI---S-------INKRKKVHM---HYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~---~-------~~~~~~~~~---~~~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.+ +..+ . .....++.. .....|.|.+++.+|+|.|
T Consensus 29 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 108 (233)
T 3bqu_C 29 SPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADY 108 (233)
T ss_dssp ECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEE
T ss_pred cCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEE
Confidence 466778899999999999988777789999842 2211 0 000111111 1223799999999999999
Q ss_pred EEEEEec-----------------------------------------------CC-ccEEEEEEEecc-----------
Q psy15390 83 LCIATKI-----------------------------------------------GP-LKIFWEIIFHMH----------- 103 (142)
Q Consensus 83 ~C~~~~~-----------------------------------------------~~-~~~~w~~~~~~~----------- 103 (142)
.|.+.+. ++ ..+.|.+.....
T Consensus 109 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 188 (233)
T 3bqu_C 109 YCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 188 (233)
T ss_dssp EEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCC
T ss_pred EEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCc
Confidence 9998653 11 258887532110
Q ss_pred --c------cceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 104 --Y------GEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 --~------~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
. ...|.|..+..+|+|.|+|.|.|....
T Consensus 189 ~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 189 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred cCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 1 124677777788999999999987543
No 194
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.62 E-value=1.8e-14 Score=92.96 Aligned_cols=72 Identities=14% Similarity=0.326 Sum_probs=51.5
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccce---ec-------CCcceEEee---ccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPI---SI-------NKRKKVHMH---YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~---~~-------~~~~~~~~~---~~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.. +..+ .. ....++... ....|.|.+++.+|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (242)
T 2znx_A 7 SPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMY 86 (242)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred cCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEE
Confidence 567788999999999999998888899999832 2211 10 011122222 123799999999999999
Q ss_pred EEEEEe
Q psy15390 83 LCIATK 88 (142)
Q Consensus 83 ~C~~~~ 88 (142)
.|.+.+
T Consensus 87 ~C~~~n 92 (242)
T 2znx_A 87 FCQQSN 92 (242)
T ss_dssp EEEECS
T ss_pred EEeEec
Confidence 999764
No 195
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.62 E-value=1.1e-14 Score=94.00 Aligned_cols=72 Identities=15% Similarity=0.326 Sum_probs=50.5
Q ss_pred CCceeEEecCCcEEEEEEEecCC-----CCeeEEEecC-Cccee---c-------CCcceEEee---ccceEEEeecCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP-----APEIKWRRED-NQPIS---I-------NKRKKVHMH---YGEQLNITKISRT 77 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~-----~~~~~w~~~~-~~~~~---~-------~~~~~~~~~---~~~~l~i~~v~~~ 77 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. . ....++... ....|.|.+++.+
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 86 (247)
T 1svz_A 7 TPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAE 86 (247)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred cCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHH
Confidence 56778899999999999998877 5789999842 22111 0 001122221 1237999999999
Q ss_pred CCeEEEEEEEe
Q psy15390 78 EMGAYLCIATK 88 (142)
Q Consensus 78 d~G~y~C~~~~ 88 (142)
|+|.|.|.+.+
T Consensus 87 D~G~Y~C~~~n 97 (247)
T 1svz_A 87 DLGIYYCFQGS 97 (247)
T ss_dssp GCEEEEEEECS
T ss_pred HCEEEEEEEcc
Confidence 99999999754
No 196
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.61 E-value=4.8e-15 Score=96.51 Aligned_cols=71 Identities=18% Similarity=0.409 Sum_probs=48.7
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Ccceec--------------CCcceEEeec-----cceEEEeecC
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPISI--------------NKRKKVHMHY-----GEQLNITKIS 75 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~~--------------~~~~~~~~~~-----~~~l~i~~v~ 75 (142)
+....+.+|++++|.|.+.+.+ .+.+.|++.+ +..+.. ....++.... ..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 3445789999999999998874 6789999831 221100 0112222221 2479999999
Q ss_pred CCCCeEEEEEEEe
Q psy15390 76 RTEMGAYLCIATK 88 (142)
Q Consensus 76 ~~d~G~y~C~~~~ 88 (142)
.+|+|.|.|.+.+
T Consensus 87 ~~DsG~Y~C~a~n 99 (257)
T 1f3r_B 87 TDDTGTYYCTRDL 99 (257)
T ss_dssp TTCCEEEEEEEES
T ss_pred cccCEEEEEEEcc
Confidence 9999999999754
No 197
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.61 E-value=2.1e-14 Score=95.13 Aligned_cols=112 Identities=16% Similarity=0.224 Sum_probs=83.6
Q ss_pred ceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee-ccceEEEee-cCCCCCeEEEEEEEecC------
Q psy15390 19 SSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH-YGEQLNITK-ISRTEMGAYLCIATKIG------ 90 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~l~i~~-v~~~d~G~y~C~~~~~~------ 90 (142)
....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....+..+... ....|.|.+ +...|.|.|+|.+.|..
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~ 190 (305)
T 2nzi_A 112 GAVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKT 190 (305)
T ss_dssp CCEEEETTCCEEEEEEEEEESCCEEEEEE-SSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEE
T ss_pred ccEEecCCCEEEEEEEECCCCCCEEEEEE-CCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeE
Confidence 45678889999999999999999999999 8877765544433222 235799999 99999999999998751
Q ss_pred -----------------------CccEEEEE--------------E-----------EeccccceEEEccCCCCCCeEEE
Q psy15390 91 -----------------------PLKIFWEI--------------I-----------FHMHYGEQLNITKISRTEMGAYL 122 (142)
Q Consensus 91 -----------------------~~~~~w~~--------------~-----------~~~~~~~~l~i~~~~~~d~g~y~ 122 (142)
...+.|.. . ........+.|..+..++.|.|+
T Consensus 191 ~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~l~~~~~y~~~ 270 (305)
T 2nzi_A 191 VELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFR 270 (305)
T ss_dssp EEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEESSSEEEECSCCSSCEEEEE
T ss_pred EEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccccCceEEecCCCCCCeEEEE
Confidence 12344531 0 00112457889999999999999
Q ss_pred EEEecCCCC
Q psy15390 123 CIATNNVPP 131 (142)
Q Consensus 123 C~a~n~~~~ 131 (142)
|.|.|..|.
T Consensus 271 ~~A~N~~G~ 279 (305)
T 2nzi_A 271 VIAENKFGL 279 (305)
T ss_dssp EEEEETTEE
T ss_pred EEEEeCCcc
Confidence 999998875
No 198
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.61 E-value=2.8e-15 Score=97.85 Aligned_cols=108 Identities=20% Similarity=0.216 Sum_probs=76.6
Q ss_pred eeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec----------
Q psy15390 20 SVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI---------- 89 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~---------- 89 (142)
...+.+|+.+.|.|.+. |.+.+.| +|..+... ...+.|.|..+...|.|.|+|.+.|.
T Consensus 107 ~~~v~~G~~v~l~C~~~--p~~~i~W---~g~~~~~~-------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~ 174 (265)
T 2oz4_A 107 KPEVSEGTEVTVKCEAH--PRAKVTL---NGVPAQPL-------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQ 174 (265)
T ss_dssp CSEEETTCEEEEEEECC--TTSEEEE---SSCSSSCC-------SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEE
T ss_pred CceecCCCcEEEEEEcc--CCCEEEE---CCEEccCC-------CCcEEEEEccccccCCceEEEEEEcCCCCCcccccc
Confidence 45678899999999987 7889999 45555221 12245888999999999999999742
Q ss_pred --------------------------------------CCccEEEEEEEe-ccccceEEEccCCCCCCeEEEEEEecCCC
Q psy15390 90 --------------------------------------GPLKIFWEIIFH-MHYGEQLNITKISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 90 --------------------------------------~~~~~~w~~~~~-~~~~~~l~i~~~~~~d~g~y~C~a~n~~~ 130 (142)
+.+.+.|.+... ....+.+ ..++.+|+|.|+|.|.|..|
T Consensus 175 ~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~g~~--~~v~~~d~G~Y~C~a~N~~G 252 (265)
T 2oz4_A 175 TRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGES--VTVTRDLEGTYLCRARSTQG 252 (265)
T ss_dssp EEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSC--EECCGGGCEEEEEEEEETTE
T ss_pred cEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCCCcE--EEeehhhCeEEEEEEECCCC
Confidence 224556654321 1112222 24788999999999999988
Q ss_pred CCeeeEEEEEEC
Q psy15390 131 PSVSKRITVDVE 142 (142)
Q Consensus 131 ~~~s~~~~l~V~ 142 (142)
. .+..+.|.|+
T Consensus 253 ~-~~~~~~l~V~ 263 (265)
T 2oz4_A 253 E-VTREVTVNVL 263 (265)
T ss_dssp E-EEEEEEEEEE
T ss_pred c-EEEEEEEEEe
Confidence 6 6888888773
No 199
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.61 E-value=2.4e-16 Score=104.96 Aligned_cols=113 Identities=14% Similarity=0.261 Sum_probs=83.0
Q ss_pred CceeEEecCCcEEEEEEEecCC-CCeeEEEecCCcceec--CCcceEEeeccceEEEeecCCCCCeEEEEEEEec-----
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP-APEIKWRREDNQPISI--NKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI----- 89 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~-~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~----- 89 (142)
...+.+.+|+.+.|.|.+.+.+ .+.+.|++ ++..... ....++ ...++.|.|.+++..|+|.|+|.+.|.
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k-~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (315)
T 1itb_B 12 KIILVSSANEIDVRPCPLNPNEHKGTITWYK-DDSKTPVSTEQASRI-HQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLR 89 (315)
T ss_dssp CCCCEEETTSCCCCBCCCCSCCCSSCCCEEC-TTSCSCSCCCTTSSS-EECSSBEECTTCCGGGCSCCEECCCSSSCCCC
T ss_pred ceEEEEcCCCcEEEEeeccCcCCCceEEEEe-CCCcCccccccCCcE-eccCCeEEECCCChhhCEEEEEEEeCCceEEE
Confidence 3466889999999999998877 67899999 6653321 112222 223458999999999999999998754
Q ss_pred -----------------------------------------------CCccEEEEEEEe---------ccccceEEEccC
Q psy15390 90 -----------------------------------------------GPLKIFWEIIFH---------MHYGEQLNITKI 113 (142)
Q Consensus 90 -----------------------------------------------~~~~~~w~~~~~---------~~~~~~l~i~~~ 113 (142)
+.+.+.|.+... ....+.|.|.++
T Consensus 90 ~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v 169 (315)
T 1itb_B 90 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNV 169 (315)
T ss_dssp EECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSC
T ss_pred EEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEec
Confidence 124677865321 123558999999
Q ss_pred CCCCCeEEEEEEe-cCCCCC
Q psy15390 114 SRTEMGAYLCIAT-NNVPPS 132 (142)
Q Consensus 114 ~~~d~g~y~C~a~-n~~~~~ 132 (142)
+.+|+|.|+|.|. |..|..
T Consensus 170 ~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 170 AEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp CGGGCEEEEEEEEEEETTEE
T ss_pred eehhCcEEEEEEEcCCCCcE
Confidence 9999999999999 677753
No 200
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.61 E-value=3e-14 Score=92.46 Aligned_cols=72 Identities=15% Similarity=0.286 Sum_probs=49.6
Q ss_pred CCceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Cccee---c-------CCcceEEeec---cceEEEeecCCCCCe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQPIS---I-------NKRKKVHMHY---GEQLNITKISRTEMG 80 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~~~---~-------~~~~~~~~~~---~~~l~i~~v~~~d~G 80 (142)
.+..+.+.+|++++|.|.+.+. +.+.+.|++.+ +..+. . ....++.... ...|.|.+++.+|+|
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 87 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEA 87 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCE
Confidence 3456788999999999999876 67789999832 21111 0 0111222211 236999999999999
Q ss_pred EEEEEEEe
Q psy15390 81 AYLCIATK 88 (142)
Q Consensus 81 ~y~C~~~~ 88 (142)
.|.|.+.+
T Consensus 88 ~Y~C~~~~ 95 (256)
T 3ux9_B 88 DYYCQVRD 95 (256)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999875
No 201
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=3.8e-15 Score=86.22 Aligned_cols=80 Identities=30% Similarity=0.501 Sum_probs=61.1
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
...+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+..... ++....++.|.|.+++..|+|.|+|
T Consensus 5 ~~~pP~i~~---~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~g~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C 79 (118)
T 2eo9_A 5 SSGPPVIRQ---GPVNQTVAVDGTFVLSCVATGSPVPTILWRK-DGVLVSTQDS-RIKQLENGVLQIRYAKLGDTGRYTC 79 (118)
T ss_dssp CCCSCCCSB---CCCCEEEETTCEEEEECBCCCSSCCEEEEEE-SSSBCCTTST-TEEEEETTEEEEESCCGGGCCCEEE
T ss_pred CCCCCEEEc---CCCCEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECcCCCC-eEEEccCCEEEEccCCcCCCEEEEE
Confidence 346788877 7788889999999999999999999999999 8877654222 2233445577888888888888888
Q ss_pred EEEec
Q psy15390 85 IATKI 89 (142)
Q Consensus 85 ~~~~~ 89 (142)
.+.|.
T Consensus 80 ~a~n~ 84 (118)
T 2eo9_A 80 IASTP 84 (118)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 77765
No 202
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.60 E-value=1.6e-15 Score=96.53 Aligned_cols=120 Identities=18% Similarity=0.228 Sum_probs=79.1
Q ss_pred CceeEEecCCcEEEEEEEec-CCCCe----eEEEecCCcceec-------------CCcceEEe------eccceEEEee
Q psy15390 18 PSSVAVREEFNITLTCKAEG-FPAPE----IKWRREDNQPISI-------------NKRKKVHM------HYGEQLNITK 73 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~-~~~~~----~~w~~~~~~~~~~-------------~~~~~~~~------~~~~~l~i~~ 73 (142)
+..+.+.+|++++|.|.+.+ .+.+. +.|++ ++..... ..+..+.. ..+.+|.|.+
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWAR-HGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECB-SSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEe-CCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 44566788999999999854 33333 89999 5432110 11111111 1245799999
Q ss_pred cCCCCCeEEEEEEEec--------------------------------------------CCccEEEEEE--------E-
Q psy15390 74 ISRTEMGAYLCIATKI--------------------------------------------GPLKIFWEII--------F- 100 (142)
Q Consensus 74 v~~~d~G~y~C~~~~~--------------------------------------------~~~~~~w~~~--------~- 100 (142)
++.+|+|.|.|.+.+. +.+.+.|.+. .
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~ 164 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQV 164 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEE
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCCCCCCcccee
Confidence 9999999999998863 2357888532 0
Q ss_pred ec------cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEE
Q psy15390 101 HM------HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITV 139 (142)
Q Consensus 101 ~~------~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l 139 (142)
.. ...+.|.|..+...|.|.|+|.|.|..+. ....+.|
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~-~~~~~~v 208 (221)
T 3eow_R 165 PGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFE-KPQLLTV 208 (221)
T ss_dssp CCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSS-SCEEEEE
T ss_pred ecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCC-CCeEEEE
Confidence 00 11236888889999999999999998765 3444443
No 203
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.60 E-value=1.9e-14 Score=102.00 Aligned_cols=120 Identities=16% Similarity=0.294 Sum_probs=80.6
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecC-CCC-eeEEEecCCcceecCCcceEEe-----eccceEEEeecCCCCC
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGF-PAP-EIKWRREDNQPISINKRKKVHM-----HYGEQLNITKISRTEM 79 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~-----~~~~~l~i~~v~~~d~ 79 (142)
.+|.+.. ......+.+|+.+.|.|.+.+. |.+ .+.|++ ++..+......+... ...+.|.|.++...|
T Consensus 218 ~~P~v~~---~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k-~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d- 292 (523)
T 2rcj_C 218 KGPSVFP---LAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNS-GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT- 292 (523)
T ss_pred cCCEEEe---cCCCcccccCCceEEEEEEeceeCCCeEEEEec-CCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-
Confidence 4565553 2333456789999999999886 767 799999 776543211111111 112479999999999
Q ss_pred eEEEEEEEec--------------------------------------------CC----ccEEEEEEEecc--------
Q psy15390 80 GAYLCIATKI--------------------------------------------GP----LKIFWEIIFHMH-------- 103 (142)
Q Consensus 80 G~y~C~~~~~--------------------------------------------~~----~~~~w~~~~~~~-------- 103 (142)
|.|+|.+.|. ++ +.+.|.+.....
T Consensus 293 G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~ 372 (523)
T 2rcj_C 293 QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPR 372 (523)
T ss_pred ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCc
Confidence 9999999874 11 367886532111
Q ss_pred ---c------cceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 104 ---Y------GEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 ---~------~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
. .+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 373 ~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 409 (523)
T 2rcj_C 373 EQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALP 409 (523)
T ss_pred eecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCC
Confidence 1 124777788889999999999987654
No 204
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.60 E-value=3.2e-15 Score=81.67 Aligned_cols=67 Identities=19% Similarity=0.398 Sum_probs=44.3
Q ss_pred CceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEEEE
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C~~ 86 (142)
...+.+.+|+++.|.|.+.+ |.+.+.|++ +|+.+....+..+....+ ..|.|.+++..|+|.|.|.+
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 70 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYK-DGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDA 70 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEE-TTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEEC
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEE-CCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEE
Confidence 34678899999999999865 778899999 998886554433322211 23555555555555555544
No 205
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.60 E-value=1.6e-14 Score=84.36 Aligned_cols=97 Identities=21% Similarity=0.294 Sum_probs=60.5
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecC---CCCeeEEEecCCcc-eecCCcceEEeeccceEEEeec--CCCCCeE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGF---PAPEIKWRREDNQP-ISINKRKKVHMHYGEQLNITKI--SRTEMGA 81 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~---~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~l~i~~v--~~~d~G~ 81 (142)
.|.|.. .++.+.+.+|++++|.|.+.+. |.|.|.||+ ++.. +......+ +.+... .... .
T Consensus 7 ~~~F~~---~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~K-gk~~~~~~~~~~~--------~~~~~~~~~~~~--~ 72 (126)
T 2dav_A 7 GILFIE---KPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFK-GKWMDLASKAGKH--------LQLKETFERHSR--V 72 (126)
T ss_dssp SCSCCS---CCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEE-SSSCCHHHHTTSS--------EEEEEEEETTTT--E
T ss_pred ccEEEE---cCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEee-CcCcccCCCCCce--------EEEccccccccc--c
Confidence 355666 7888999999999999999874 788999999 5421 11000011 111100 0000 0
Q ss_pred EEEEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 82 YLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 82 y~C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....|.|.+++.+|+|+|+|+|.|..+. .+..+.|.|
T Consensus 73 ----------------------~~~~L~I~~v~~~DaG~Y~Cevsn~~g~-~~~~~~L~V 109 (126)
T 2dav_A 73 ----------------------YTFEMQIIKAKDNFAGNYRCEVTYKDKF-DSCSFDLEV 109 (126)
T ss_dssp ----------------------EEEEEEECSCCTTSCEEEEEEEECSSCE-EEECCEEEE
T ss_pred ----------------------ceEEEEEccCCcccCEEEEEEEEeCCCc-EEEEEEEEE
Confidence 0234777888888888888888887664 556666655
No 206
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.60 E-value=8.6e-15 Score=101.46 Aligned_cols=104 Identities=15% Similarity=0.294 Sum_probs=75.3
Q ss_pred ecCCcEEEEEEEec-CCCC-eeEEEecCCcceecCCcceEE--------eeccceEEEeecCCCCCeEEEEEEEec----
Q psy15390 24 REEFNITLTCKAEG-FPAP-EIKWRREDNQPISINKRKKVH--------MHYGEQLNITKISRTEMGAYLCIATKI---- 89 (142)
Q Consensus 24 ~~g~~v~l~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~--------~~~~~~l~i~~v~~~d~G~y~C~~~~~---- 89 (142)
.+|+.+.|.|.+.+ .|.+ .+.|++ +|..+......... ....+.|.|.++...|+|.|+|.+.|.
T Consensus 129 ~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 207 (438)
T 1qgc_4 129 LTSGGASVVCFLNNFYPKDINVKWKI-DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 207 (438)
T ss_dssp HHTTEEEEEEEEEEEBSSCEEEEEEE-TTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred ccCCceEEEEEEccccCCCcEEEEEE-CCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC
Confidence 45889999999977 6666 899999 88877544111000 111246999999999999999999874
Q ss_pred --------------------------------------C--CccEEEEEEE-----e-----------------------
Q psy15390 90 --------------------------------------G--PLKIFWEIIF-----H----------------------- 101 (142)
Q Consensus 90 --------------------------------------~--~~~~~w~~~~-----~----------------------- 101 (142)
+ .+.+.|.+.. .
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 287 (438)
T 1qgc_4 208 PIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFT 287 (438)
T ss_dssp CEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEE
T ss_pred ceecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEE
Confidence 1 2478887541 0
Q ss_pred c-----cccceEEEccCCCCCCeEEEEEEecC
Q psy15390 102 M-----HYGEQLNITKISRTEMGAYLCIATNN 128 (142)
Q Consensus 102 ~-----~~~~~l~i~~~~~~d~g~y~C~a~n~ 128 (142)
. .....|.|.+++.+|+|.|+|.|.|.
T Consensus 288 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 319 (438)
T 1qgc_4 288 ISRDNAKNTLYLQMSSLRSADTAMYYCVRRED 319 (438)
T ss_dssp EEEETTTTEEEEEECSCCGGGCCEEEEEECCS
T ss_pred EEeecCCCeEEEEECCCChhhCEEEEEEEEcc
Confidence 0 01237999999999999999999984
No 207
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.59 E-value=6.3e-15 Score=102.14 Aligned_cols=115 Identities=20% Similarity=0.313 Sum_probs=80.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCC----CeeEEEecC-Cccee----------cCCcceEEee-c--cceEEEeecCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPA----PEIKWRRED-NQPIS----------INKRKKVHMH-Y--GEQLNITKISRTE 78 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~----~~~~w~~~~-~~~~~----------~~~~~~~~~~-~--~~~l~i~~v~~~d 78 (142)
.+..+.+.+|+++.|.|.+.+.+. +.+.|++.+ +..+. .....++... . ...|.|.+++.+|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (438)
T 1qgc_4 7 SPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADD 86 (438)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcC
Confidence 467788999999999999987775 379999932 33221 0111222221 1 2479999999999
Q ss_pred CeEEEEEEEec-----------------------------------------------CCc-cEEEEEEEec---c----
Q psy15390 79 MGAYLCIATKI-----------------------------------------------GPL-KIFWEIIFHM---H---- 103 (142)
Q Consensus 79 ~G~y~C~~~~~-----------------------------------------------~~~-~~~w~~~~~~---~---- 103 (142)
+|.|+|.+.+. +.+ .+.|.+.... .
T Consensus 87 ~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 166 (438)
T 1qgc_4 87 VATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 166 (438)
T ss_dssp CEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEE
T ss_pred CeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceec
Confidence 99999998763 122 6888652111 0
Q ss_pred ------c------cceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 104 ------Y------GEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 ------~------~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
. .+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 167 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 206 (438)
T 1qgc_4 167 WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 206 (438)
T ss_dssp EECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred cccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccC
Confidence 0 236888899999999999999998765
No 208
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.59 E-value=2.4e-14 Score=94.41 Aligned_cols=72 Identities=19% Similarity=0.421 Sum_probs=50.1
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. .....++.... ...|.|.+
T Consensus 32 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 111 (282)
T 1qok_A 32 QSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSS 111 (282)
T ss_dssp ECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECc
Confidence 45577899999999999998764 5689999842 22111 00112222221 24799999
Q ss_pred cCCCCCeEEEEEEEe
Q psy15390 74 ISRTEMGAYLCIATK 88 (142)
Q Consensus 74 v~~~d~G~y~C~~~~ 88 (142)
++.+|+|.|.|.+.+
T Consensus 112 v~~~DsG~Y~C~~~n 126 (282)
T 1qok_A 112 LTSEDTAVYYCNEGT 126 (282)
T ss_dssp CCGGGCEEEEEEEEC
T ss_pred CChhhCEEEEEEecc
Confidence 999999999999864
No 209
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.59 E-value=1.5e-14 Score=93.41 Aligned_cols=71 Identities=21% Similarity=0.401 Sum_probs=50.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccc--------------eecC-CcceEEee----ccceEEEeecCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQP--------------ISIN-KRKKVHMH----YGEQLNITKISR 76 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~--------------~~~~-~~~~~~~~----~~~~l~i~~v~~ 76 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.. +.. .... ...++... ...+|.|.+++.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 86 (246)
T 4dzb_B 7 HPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHP 86 (246)
T ss_dssp ECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCG
T ss_pred CCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCH
Confidence 566788999999999999999888899999821 111 1100 01222222 123799999999
Q ss_pred CCCeEEEEEEE
Q psy15390 77 TEMGAYLCIAT 87 (142)
Q Consensus 77 ~d~G~y~C~~~ 87 (142)
+|+|.|.|.+.
T Consensus 87 ~D~G~Y~C~~~ 97 (246)
T 4dzb_B 87 EDSSFYICSAR 97 (246)
T ss_dssp GGCEEEEEEEC
T ss_pred HHCEEEEEEEe
Confidence 99999999986
No 210
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.59 E-value=5.7e-14 Score=78.58 Aligned_cols=88 Identities=23% Similarity=0.394 Sum_probs=60.4
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEe-cCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+|.+... .+....+.+|+++.|.|.+. +.|.+.+.|++ ++....... ....
T Consensus 9 ~~~~~~~--~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k-~~~~~~~~~----~~~~--------------------- 60 (98)
T 1gl4_B 9 PIMVTVE--EQRSQSVRPGADVTFICTAKSKSPAYTLVWTR-LHNGKLPSR----AMDF--------------------- 60 (98)
T ss_dssp CEEEEEC--SCCEEEECTTCCEEEEEEEEESSSCCEEEEEE-GGGBCCCTT----EEEE---------------------
T ss_pred CcEEEEe--CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEe-CCCCCCCce----eecC---------------------
Confidence 4444442 45677899999999999998 57888999999 432221110 0111
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 61 ------------------~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~ 97 (98)
T 1gl4_B 61 ------------------NGILTIRNVQPSDAGTYVCTGSNMFAM-DQGTATLHVQ 97 (98)
T ss_dssp ------------------TTEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEEC
T ss_pred ------------------CCEEEEeCCChhhCEEEEEEecCCCCc-cccEEEEEEe
Confidence 235778888888888888888888775 5667777664
No 211
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.59 E-value=9.2e-15 Score=92.82 Aligned_cols=72 Identities=14% Similarity=0.432 Sum_probs=50.7
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Ccceec---------------CCcceEEeec-----cceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPISI---------------NKRKKVHMHY-----GEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~~---------------~~~~~~~~~~-----~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+.. ....++.... ..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 34566889999999999998765 5789999842 332210 0112222221 24799999
Q ss_pred cCCCCCeEEEEEEEe
Q psy15390 74 ISRTEMGAYLCIATK 88 (142)
Q Consensus 74 v~~~d~G~y~C~~~~ 88 (142)
++.+|+|.|.|.+.+
T Consensus 86 v~~~D~G~Y~C~~~~ 100 (219)
T 1c1e_H 86 LKNEDMATYFCARGT 100 (219)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CCcccCEEEEEEEec
Confidence 999999999999876
No 212
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.8e-14 Score=83.29 Aligned_cols=100 Identities=22% Similarity=0.309 Sum_probs=66.7
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecC---CCCeeEEEecCCcc-eecCCcceEEeeccceEEEeec-CCCCCeE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGF---PAPEIKWRREDNQP-ISINKRKKVHMHYGEQLNITKI-SRTEMGA 81 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~---~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~l~i~~v-~~~d~G~ 81 (142)
.++.|.. .|+.+.+.+|++++|.|.+.+. |.|.|.||+ ++.. +.... +..+.+... ..... .
T Consensus 11 ~~~~f~~---~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~K-gk~~~~~~~~--------~~~~~~~~~~~~~~~-~ 77 (118)
T 2edn_A 11 PTGVFLK---KPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFK-GKWLELGSKS--------GARFSFKESHNSASN-V 77 (118)
T ss_dssp CSSSCSB---CCCCCEEETTSCEECCEEEETTTSSSCCCCEEEE-TTTCCCCCST--------TSSCEEEEEECSSSC-E
T ss_pred CcceEEE---CCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEee-CCEeccCCCC--------ccEEEeccccccccc-c
Confidence 3455666 7888999999999999999875 688999999 5321 11110 011111110 00000 0
Q ss_pred EEEEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 82 YLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 82 y~C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
....|.|.+++.+|+|.|+|+|.|..|. .+..+.|.|+
T Consensus 78 ----------------------~~~~L~I~~v~~~D~G~Y~Cevsn~~g~-~s~~~~L~V~ 115 (118)
T 2edn_A 78 ----------------------YTVELHIGKVVLGDRGYYRLEVKAKDTC-DSCGFNIDVE 115 (118)
T ss_dssp ----------------------EEEEEEESSCCTTTCSCEEEEEECSSCE-EEEEECCEEE
T ss_pred ----------------------ceEEEEEeeCChhhCEEEEEEEEEcCCc-EEEEEEEEEE
Confidence 1235899999999999999999999885 7888887773
No 213
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.59 E-value=6.9e-15 Score=82.00 Aligned_cols=87 Identities=20% Similarity=0.360 Sum_probs=61.9
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.||.+.. .+....+.+|+++.|.|.+.+.| +.+.|++ ++..+....+.. . .+
T Consensus 8 ~pp~~~~---~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k-~g~~~~~~~~~~--~-~~-------------------- 59 (95)
T 2ckn_A 8 QPWGVPV---EVESLLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLVESNRTR--I-TG-------------------- 59 (95)
T ss_dssp CSCCBTT---BBCCEEECTTSCEEEECCEESSC-CEEEEEB-TTBCCCCCSSEE--E-CS--------------------
T ss_pred CCCEEEc---CcceEEEcCCCeEEEEEECCCCC-CceEEEE-CCEecCCCCCEE--E-eC--------------------
Confidence 3556655 56778899999999999999887 7999999 887764322111 1 11
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 60 -------------------~~L~i~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V 94 (95)
T 2ckn_A 60 -------------------EEVEVRDSIPADSGLYACVTSSPSGS-DTTYFSVNV 94 (95)
T ss_dssp -------------------SEEEESSCCGGGSEEEEEEEEETTEE-EEEEEEEEE
T ss_pred -------------------CEEEECCCChHHCEEEEEEeccCCCc-EEEEEEEEE
Confidence 24777777777888888888887775 566666666
No 214
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=7.2e-15 Score=82.06 Aligned_cols=44 Identities=30% Similarity=0.582 Sum_probs=36.2
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCccee
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPIS 54 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~ 54 (142)
.+|.+.. .+....+.+|++++|.|.+.+.|.+.+.|++ ++..+.
T Consensus 9 ~~~~i~~---~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~~~~~~ 52 (96)
T 2ens_A 9 EEVQLVV---EPEGGAVAPGGTVTLTCEVPAQPSPQIHWMK-DGVPLP 52 (96)
T ss_dssp CSCCCEE---ESTTSEECTTCEEEEECCCSSCSSCCCCCEE-SSSBCS
T ss_pred CCCEEEE---CCCCCEEcCCCeEEEEEEEccCCCCEEEEEE-CCEECc
Confidence 4566666 6667789999999999999998888999999 777653
No 215
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.58 E-value=1.6e-14 Score=92.41 Aligned_cols=114 Identities=13% Similarity=0.196 Sum_probs=76.5
Q ss_pred CceeEEecCCcEEEEEEEecCC-CC-eeEEEecC-Ccce---e-------cCCcceEEee---ccceEEEeecCCCCCeE
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP-AP-EIKWRRED-NQPI---S-------INKRKKVHMH---YGEQLNITKISRTEMGA 81 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~-~~-~~~w~~~~-~~~~---~-------~~~~~~~~~~---~~~~l~i~~v~~~d~G~ 81 (142)
+..+.+.+|++++|.|.+.+.+ .+ .+.|++.+ +..+ . .....++... ....|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 5566788999999999998754 34 69999842 2221 0 0111122222 22479999999999999
Q ss_pred EEEEEEec--------------------------------------------------CC-ccEEEEEEEecc-------
Q psy15390 82 YLCIATKI--------------------------------------------------GP-LKIFWEIIFHMH------- 103 (142)
Q Consensus 82 y~C~~~~~--------------------------------------------------~~-~~~~w~~~~~~~------- 103 (142)
|.|.+.+. ++ +.+.|.+.....
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 99998742 11 268997531110
Q ss_pred -----------ccceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 104 -----------YGEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 104 -----------~~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
....|.|..+..+|+|.|+|.|.|....
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 224 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 224 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBC
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCc
Confidence 1124778888889999999999998654
No 216
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.58 E-value=4.1e-15 Score=103.49 Aligned_cols=107 Identities=22% Similarity=0.300 Sum_probs=68.7
Q ss_pred eeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec----------
Q psy15390 20 SVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI---------- 89 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~---------- 89 (142)
...+.+|+.++|.|.+. |.+.+.| +|..+... .....|.|.++...|.|.|+|.+.|.
T Consensus 292 ~~~v~~G~~v~l~C~~~--p~p~i~W---~g~~~~~~-------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~ 359 (450)
T 1z7z_I 292 KPEVSEGTEVTVKCEAH--PRAKVTL---NGVPAQPL-------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQ 359 (450)
T ss_dssp CSEEETTCEEEEEEEC----------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEE
T ss_pred CeeEeCCCcEEEEEecC--CCCEeEE---CCEEcCCC-------CceEEEEEecCcccCCceEEEEEEcCCCCcccccce
Confidence 34788999999999987 7788999 45554211 12347999999999999999999852
Q ss_pred --------------------------------------CCccEEEEEEEe--ccccceEEEccCCCCCCeEEEEEEecCC
Q psy15390 90 --------------------------------------GPLKIFWEIIFH--MHYGEQLNITKISRTEMGAYLCIATNNV 129 (142)
Q Consensus 90 --------------------------------------~~~~~~w~~~~~--~~~~~~l~i~~~~~~d~g~y~C~a~n~~ 129 (142)
+.+.+.|.+... ...+..+ .++.+|+|.|+|.|.|..
T Consensus 360 ~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~~~---~v~~~d~G~Y~C~a~N~~ 436 (450)
T 1z7z_I 360 TRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESV---TVTRDLEGTYLCRARSTQ 436 (450)
T ss_dssp EEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCE---ECCGGGCEEEEEEEEETT
T ss_pred eEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCCeE---eEehhhCeEEEEEEEeCC
Confidence 335677765421 1222222 678899999999999999
Q ss_pred CCCeeeEEEEEEC
Q psy15390 130 PPSVSKRITVDVE 142 (142)
Q Consensus 130 ~~~~s~~~~l~V~ 142 (142)
|. .+..+.|.|+
T Consensus 437 G~-~~~~~~l~V~ 448 (450)
T 1z7z_I 437 GE-VTREVTVNVL 448 (450)
T ss_dssp EE-EEEEEEEEEE
T ss_pred Cc-eeEEEEEEEE
Confidence 96 6788888773
No 217
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.57 E-value=5.4e-14 Score=80.08 Aligned_cols=104 Identities=18% Similarity=0.329 Sum_probs=69.4
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecC--CCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGF--PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y 82 (142)
...+|.+.. .+....+.+|++++|.|.+.+. +.+.+.|++ ++..+....... .......+..
T Consensus 7 ~~~~P~i~~---~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k-~~~~~~~~~~~~----------~~~~~~~~~~-- 70 (112)
T 3so5_A 7 DFPXPQITV---QPETQSAIXGSDVSFTCSAASSSDSPMTFAWXX-DNEALQDAEMEN----------YAHLRAQGGE-- 70 (112)
T ss_dssp -CCSCEEEE---CCCCEEECTTCCEEEEEEEEESCCCCCEEEEEE-TTEECTTCEEEE----------EEETTGGGSS--
T ss_pred CCCCCeEEe---CCCCcEEECCCCEEEEEEEecCCCCCEEEEEcc-CCcccccccccc----------eeeeeccCCC--
Confidence 346788887 6777889999999999999864 356899999 776654321000 0011110000
Q ss_pred EEEEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 83 LCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 83 ~C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.......|.|.+++.+|+|.|+|.|.|..|...+..+.|.|.
T Consensus 71 ------------------~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~ 112 (112)
T 3so5_A 71 ------------------LMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTIN 112 (112)
T ss_dssp ------------------CEEEEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred ------------------ccccceEEEEeccccccCCeEEEEEEeCCCcEEEeEEEEEeC
Confidence 000123588999999999999999999988655677777763
No 218
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=1.6e-14 Score=82.11 Aligned_cols=80 Identities=15% Similarity=0.253 Sum_probs=57.7
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYL 83 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~ 83 (142)
...+|.|.. .+....+.+|+++.|.|.+.+.+.+ +.|++ ++..+....+..+..... ..|.|.++..+|+|.|+
T Consensus 5 ~~~~p~~~~---~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k-~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 79 (106)
T 2dlt_A 5 SSGQLEVLQ---DIADLTVKAAEQAVFKCEVSDEKVT-GKWYK-NGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYT 79 (106)
T ss_dssp SCCCCCEEE---CCCCEEEESSCCEECCCEESCSSCE-EEEEE-SSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEE
T ss_pred CCCCCEEec---CCCCeEEeCCCeEEEEEEEcCCCcc-eEEEc-CCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEE
Confidence 346788887 7788899999999999999988776 99999 888776544433322111 35777777777777777
Q ss_pred EEEEec
Q psy15390 84 CIATKI 89 (142)
Q Consensus 84 C~~~~~ 89 (142)
|.+.|.
T Consensus 80 C~a~n~ 85 (106)
T 2dlt_A 80 FVPDGY 85 (106)
T ss_dssp EEEETS
T ss_pred EEEccC
Confidence 766654
No 219
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=8.8e-15 Score=83.01 Aligned_cols=78 Identities=12% Similarity=0.118 Sum_probs=58.2
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCC-eeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAP-EIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLC 84 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C 84 (142)
.||.|.. .+....+.+|++++|.|.+.+.+.+ .+.|++ +|..+....+..+..... ..|.|.+++.+|+|.|+|
T Consensus 7 ~p~~~~~---~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k-~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (104)
T 2eny_A 7 GHVGITK---RLKTMEVLEGESCSFECVLSHESASDPAMWTV-GGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVF 82 (104)
T ss_dssp CCCCCSB---CCCCEEEESSCCEEEEEECSSCCCSSCBCCBS-SSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEE
T ss_pred CCCEEEe---cCCCcEEcCCCcEEEEEEEcCCCCCceeEEEE-CCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEE
Confidence 4566766 6778899999999999999887644 799999 888876655444332221 368888888888888888
Q ss_pred EEEe
Q psy15390 85 IATK 88 (142)
Q Consensus 85 ~~~~ 88 (142)
.+.+
T Consensus 83 ~a~~ 86 (104)
T 2eny_A 83 SVRG 86 (104)
T ss_dssp EETT
T ss_pred EECC
Confidence 7654
No 220
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=2e-14 Score=81.22 Aligned_cols=79 Identities=20% Similarity=0.318 Sum_probs=58.1
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAYL 83 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y~ 83 (142)
...||.+.. .+....+.+|+++.|.|.+.+ +.+.+.|++ ++..+....+..+.... ...|.|.+++..|+|.|.
T Consensus 5 ~~~pp~~~~---~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 79 (103)
T 2edf_A 5 SSGPAAIIK---PLEDQWVAPGEDVELRCELSR-AGTPVHWLK-DRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYT 79 (103)
T ss_dssp CCCCCCEEE---CCCCEEECTTSCEEECCEESS-SSCCCCEEE-SSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEE
T ss_pred CCCCcEEEe---cCCccEEcCCCCEEEEEEEeC-CCCcEEEEE-CCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEE
Confidence 346788877 677889999999999999986 777899999 88877554433322221 125777888888888888
Q ss_pred EEEEe
Q psy15390 84 CIATK 88 (142)
Q Consensus 84 C~~~~ 88 (142)
|.+.|
T Consensus 80 C~a~n 84 (103)
T 2edf_A 80 CEVEA 84 (103)
T ss_dssp EECSS
T ss_pred EEEcc
Confidence 87766
No 221
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.56 E-value=6.8e-14 Score=91.24 Aligned_cols=113 Identities=14% Similarity=0.181 Sum_probs=76.6
Q ss_pred EEecCCcEEEEEEEec-CCCC--eeEEEecCCcceecCCcceEEeeccceEEEeec---CCCCCeE--EEEEEEec----
Q psy15390 22 AVREEFNITLTCKAEG-FPAP--EIKWRREDNQPISINKRKKVHMHYGEQLNITKI---SRTEMGA--YLCIATKI---- 89 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~-~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v---~~~d~G~--y~C~~~~~---- 89 (142)
.+.+|+.++|.|.+.+ .|.+ .+.|++ ++..+.. . ....+..+.+..+ +..|+|. |+|.+.|.
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k-~~~~l~~----~-~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~ 87 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLAL-GDQRLNP----T-VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQ 87 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEE-TTEECCC----E-EEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEe-CCEECCc----e-EeeCCCeEEEEeecccccccCCcceEEEEEecCCCCc
Confidence 6789999999999998 6766 899999 8877643 1 2233445666555 7888885 99999865
Q ss_pred ------------------------------------CCccEEEEEEEec---cccceEEEccCCCCCCeEEEEEEecCC-
Q psy15390 90 ------------------------------------GPLKIFWEIIFHM---HYGEQLNITKISRTEMGAYLCIATNNV- 129 (142)
Q Consensus 90 ------------------------------------~~~~~~w~~~~~~---~~~~~l~i~~~~~~d~g~y~C~a~n~~- 129 (142)
+.+.+.| ..... .....|.+..+...|.|.|+|.|.|..
T Consensus 88 ~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~p~~~i~W-~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~ 166 (265)
T 2oz4_A 88 ETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTL-NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVA 166 (265)
T ss_dssp EEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECCTTSEEEE-SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECS
T ss_pred EEEEEEEEeCCCCceeecCCceecCCCcEEEEEEccCCCEEEE-CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCC
Confidence 2345666 11111 123457788888899999999998644
Q ss_pred CCCe--eeEEEEEE
Q psy15390 130 PPSV--SKRITVDV 141 (142)
Q Consensus 130 ~~~~--s~~~~l~V 141 (142)
|... +..+.|.|
T Consensus 167 g~~~~~s~~~~l~V 180 (265)
T 2oz4_A 167 GQLIHKNQTRELRV 180 (265)
T ss_dssp SSEEEEEEEEEEEE
T ss_pred CCcccccccEEEEE
Confidence 5422 25555554
No 222
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=1.8e-14 Score=81.39 Aligned_cols=77 Identities=12% Similarity=0.220 Sum_probs=57.6
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCc--ceEEeecc-ceEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKR--KKVHMHYG-EQLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~--~~~~~~~~-~~l~i~~v~~~d~G~y~ 83 (142)
.|+.|.. .+....+.+|+++.|.|.+.+ +.+.+.|++ ++..+..... .++..... ..|.|.+++..|+|.|+
T Consensus 6 ~p~~~~~---~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 80 (103)
T 1x44_A 6 SGIMVTK---QLEDTTAYCGERVELECEVSE-DDANVKWFK-NGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYS 80 (103)
T ss_dssp SSCCCSB---CCCCEEEETTEEEEEEEECSS-SSCCCEEEE-TTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEE
T ss_pred CCceeec---cCCCEEEECCCCEEEEEEecC-CCCeEEEEE-CCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEE
Confidence 3455665 677788999999999999977 668999999 8887765542 23322211 46888999999999999
Q ss_pred EEEEe
Q psy15390 84 CIATK 88 (142)
Q Consensus 84 C~~~~ 88 (142)
|.+.|
T Consensus 81 C~a~n 85 (103)
T 1x44_A 81 VMTTG 85 (103)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 98865
No 223
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.55 E-value=2e-13 Score=89.26 Aligned_cols=77 Identities=19% Similarity=0.303 Sum_probs=53.4
Q ss_pred CeeeecCCCCceeEEecCCcEEEEEEEecCC------CCeeEEEecC-Cccee---c-------CCcceEEee---ccce
Q psy15390 9 PNILDTESTPSSVAVREEFNITLTCKAEGFP------APEIKWRRED-NQPIS---I-------NKRKKVHMH---YGEQ 68 (142)
Q Consensus 9 p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~------~~~~~w~~~~-~~~~~---~-------~~~~~~~~~---~~~~ 68 (142)
+.+.. .+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. . ....++... ....
T Consensus 6 ~~v~q---~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~ 82 (264)
T 2gjj_A 6 IVLTQ---TPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFT 82 (264)
T ss_dssp CCEEE---ECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE
T ss_pred cceEe---cCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEE
Confidence 44555 67788899999999999998876 5689999842 32211 0 011222222 1247
Q ss_pred EEEeecCCCCCeEEEEEEEe
Q psy15390 69 LNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 69 l~i~~v~~~d~G~y~C~~~~ 88 (142)
|.|.+++.+|+|.|.|.+.+
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~ 102 (264)
T 2gjj_A 83 LTIGSVKAEDLAVYYCQQYS 102 (264)
T ss_dssp EEESSCCGGGCEEEEEEECS
T ss_pred EEECCCCHHHCEEEEEEEec
Confidence 99999999999999999753
No 224
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.55 E-value=8.7e-14 Score=95.00 Aligned_cols=123 Identities=17% Similarity=0.263 Sum_probs=88.7
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee---ccceEEEeecCCCCCeE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH---YGEQLNITKISRTEMGA 81 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~v~~~d~G~ 81 (142)
|..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......++... ....|.|.++...|+|.
T Consensus 97 V~~~P~~~~---~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 172 (389)
T 2jll_A 97 IEYAPKFIS---NQTIYYSWEGNPINISCDVKSNPPASIHWRR-DKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGR 172 (389)
T ss_dssp EEEEEEECC---SCCEEEECTTCCEEEEECEEEESCCEEEEEE-TTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEE
T ss_pred EEeCCEEec---CcceEEeccCCEEEEEEEEEecCCCeEEEEE-CCccCCcccCceEEEeccCCEEEEEECCCChhhCEE
Confidence 445677655 4445578899999999999999999999999 8887765432222222 23479999999999999
Q ss_pred EEEEEEecC-----------------------------CccEEEE------------------EE-------E-eccccc
Q psy15390 82 YLCIATKIG-----------------------------PLKIFWE------------------II-------F-HMHYGE 106 (142)
Q Consensus 82 y~C~~~~~~-----------------------------~~~~~w~------------------~~-------~-~~~~~~ 106 (142)
|.|.+.|.. ...+.|. .. . ......
T Consensus 173 Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~~~~~~~ 252 (389)
T 2jll_A 173 YNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQT 252 (389)
T ss_dssp EEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEECSTTCS
T ss_pred EEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEeeccCCcc
Confidence 999998751 0133442 10 0 001235
Q ss_pred eEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 107 QLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 107 ~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
.+.|..+...+.+.|+|.|.|..|.
T Consensus 253 ~~~i~~l~~~~~y~~~v~A~N~~G~ 277 (389)
T 2jll_A 253 MVVLNNLEPNTTYEIRVAAVNGKGQ 277 (389)
T ss_dssp EEEECSCCTTCEEEEEEEEEESSCB
T ss_pred eEEECCccCCCEEEEEEEEEcCCcc
Confidence 6899999999999999999998875
No 225
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.55 E-value=1.1e-14 Score=107.01 Aligned_cols=122 Identities=21% Similarity=0.325 Sum_probs=47.1
Q ss_pred ceeEEecCCcEEEEEEEec--CCCCeeEEEecCCcceecCCcceE---------EeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 19 SSVAVREEFNITLTCKAEG--FPAPEIKWRREDNQPISINKRKKV---------HMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~--~~~~~~~w~~~~~~~~~~~~~~~~---------~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
....+.+|++++|.|.+.+ .+.+.+.|++ ++..+........ .......|.|.+++..|+|.|+|.+.
T Consensus 232 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 310 (772)
T 3v2a_R 232 HGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 310 (772)
T ss_dssp SCEEEETTCCEEEEEEEEECTTCCCEEEEEC-C--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEE
T ss_pred CceEEecCCcEEEEEEEecCCCCceeEEEec-CCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEE
Confidence 3467889999999999987 4456799999 6665433211100 11223479999999999999999998
Q ss_pred ec---------------------------------------------CCccEEEEEEEec-------cccceEEEccCCC
Q psy15390 88 KI---------------------------------------------GPLKIFWEIIFHM-------HYGEQLNITKISR 115 (142)
Q Consensus 88 ~~---------------------------------------------~~~~~~w~~~~~~-------~~~~~l~i~~~~~ 115 (142)
|. +.+.+.|.+.... .....|.|..+..
T Consensus 311 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L~i~~v~~ 390 (772)
T 3v2a_R 311 SGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSE 390 (772)
T ss_dssp CSSCEEEEEEEEEEECCCC-------------------------------------------------------------
T ss_pred cCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeEEEecCCh
Confidence 64 2245677543211 1236788999999
Q ss_pred CCCeEEEEEEecCCCCC-eeeEEEEEE
Q psy15390 116 TEMGAYLCIATNNVPPS-VSKRITVDV 141 (142)
Q Consensus 116 ~d~g~y~C~a~n~~~~~-~s~~~~l~V 141 (142)
+|+|.|+|.|.|..|.. .+..+.|.|
T Consensus 391 ~d~G~Y~C~a~n~~g~~~~s~~~~l~v 417 (772)
T 3v2a_R 391 RDTGNYTVILTNPISKEKQSHVVSLVV 417 (772)
T ss_dssp ---------------------------
T ss_pred hcCceEEEEEEECCcCeEEEEEEEEEE
Confidence 99999999999987752 244444443
No 226
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.55 E-value=1.3e-14 Score=91.65 Aligned_cols=71 Identities=14% Similarity=0.339 Sum_probs=48.9
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee--------------cCCcceEEeec-----cceEEEeecC
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS--------------INKRKKVHMHY-----GEQLNITKIS 75 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~--------------~~~~~~~~~~~-----~~~l~i~~v~ 75 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +.... .....++.... ..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 4456789999999999998865 3689999832 22211 00112222221 1379999999
Q ss_pred CCCCeEEEEEEEe
Q psy15390 76 RTEMGAYLCIATK 88 (142)
Q Consensus 76 ~~d~G~y~C~~~~ 88 (142)
.+|+|.|.|.+.+
T Consensus 87 ~~D~G~Y~C~~~~ 99 (210)
T 3d9a_H 87 TEDTATYYCANWD 99 (210)
T ss_dssp GGGCEEEEEEETT
T ss_pred cccCEEEEEEEec
Confidence 9999999999864
No 227
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=2.4e-14 Score=80.97 Aligned_cols=77 Identities=18% Similarity=0.340 Sum_probs=51.8
Q ss_pred CCCeeeecCCCCce---eEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEE
Q psy15390 7 VPPNILDTESTPSS---VAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAY 82 (142)
Q Consensus 7 ~~p~~~~~~~~~~~---~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y 82 (142)
.+|.+.. .+.. +.+.+|+++.|.|.+.+.+.+ +.|++ +++.+....+..+..... ..|.|.+++..|+|.|
T Consensus 6 ~~P~~~~---~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 80 (104)
T 2e6p_A 6 SGPVHIL---SPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYK-DGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEF 80 (104)
T ss_dssp SSSCCCC---BCCSCEEEEEESSSCEECCEECSSTTCC-CEEEE-TTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEE
T ss_pred CCCCEEE---CCCCCccEEEeCCCcEEEEEEecCCCCc-cEEee-CCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEE
Confidence 4566655 4444 788999999999999998888 99999 888775544333322211 2466666666666666
Q ss_pred EEEEEe
Q psy15390 83 LCIATK 88 (142)
Q Consensus 83 ~C~~~~ 88 (142)
+|.+.|
T Consensus 81 ~C~a~n 86 (104)
T 2e6p_A 81 ECRTEG 86 (104)
T ss_dssp EEECSS
T ss_pred EEEECC
Confidence 666554
No 228
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.54 E-value=8.3e-14 Score=89.15 Aligned_cols=72 Identities=18% Similarity=0.447 Sum_probs=50.8
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee-----c----------CCcceEEee-----ccceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS-----I----------NKRKKVHMH-----YGEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~-----~----------~~~~~~~~~-----~~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. . ....++... .+..|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 45677899999999999998766 5689999843 22211 0 001232222 234799999
Q ss_pred cCCCCCeEEEEEEEe
Q psy15390 74 ISRTEMGAYLCIATK 88 (142)
Q Consensus 74 v~~~d~G~y~C~~~~ 88 (142)
++.+|+|.|.|.+.+
T Consensus 86 v~~~D~G~Y~C~~~~ 100 (227)
T 1mju_H 86 LTSDDSAVYYCANKL 100 (227)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CCcccCEEEEEEECC
Confidence 999999999999875
No 229
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=9.1e-14 Score=80.38 Aligned_cols=48 Identities=19% Similarity=0.433 Sum_probs=34.3
Q ss_pred ccccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC
Q psy15390 3 AYKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK 57 (142)
Q Consensus 3 ~~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~ 57 (142)
..+..||.+.. .... . ..+...|.|.+.|.|.+.+.|++ +|+.+....
T Consensus 3 L~V~~pP~i~~---~~~~-~--~~~~~~l~C~~~g~P~p~i~W~k-~g~~l~~~~ 50 (118)
T 1wwc_A 3 LTVYYPPRVVS---LEEP-E--LRLEHCIEFVVRGNPPPTLHWLH-NGQPLRESK 50 (118)
T ss_dssp -CCCCCCCCCC---CCCC-C--CCCEEEEEEEEECSSCCEEEEEE-TTEECCCSS
T ss_pred EEEecCCceec---cCCC-e--eccceEEEEEeeeeCCCeEEEEE-CCEECCCCC
Confidence 45678888765 2211 1 23667899999999999999999 888776543
No 230
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.54 E-value=3.1e-14 Score=90.59 Aligned_cols=71 Identities=14% Similarity=0.343 Sum_probs=49.1
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee-----------------cCCcceEEeec-----cceEEEe
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS-----------------INKRKKVHMHY-----GEQLNIT 72 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~-----------------~~~~~~~~~~~-----~~~l~i~ 72 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. +..+. .....++.... ...|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 3456788999999999998765 6689999842 22110 00112322221 2379999
Q ss_pred ecCCCCCeEEEEEEEe
Q psy15390 73 KISRTEMGAYLCIATK 88 (142)
Q Consensus 73 ~v~~~d~G~y~C~~~~ 88 (142)
+++.+|+|.|.|.+.+
T Consensus 87 ~v~~~D~G~Y~C~~~~ 102 (222)
T 1q9r_B 87 TLRAEDSATYYCARDH 102 (222)
T ss_dssp SCCGGGCEEEEEEECC
T ss_pred cCCcccCeEEEEEEec
Confidence 9999999999999865
No 231
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=1.3e-14 Score=81.71 Aligned_cols=78 Identities=12% Similarity=0.175 Sum_probs=53.8
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCc----ceEEeecc-ceEEEeecCCCCCe
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKR----KKVHMHYG-EQLNITKISRTEMG 80 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~----~~~~~~~~-~~l~i~~v~~~d~G 80 (142)
..||.|.. .+....+.+|+++.|.|.+.+.+ +.+.|++ ++..+..... ..+..... ..|.|.++..+|+|
T Consensus 6 ~~p~~~~~---~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k-~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 80 (101)
T 2edk_A 6 SGPVLIVT---PLEDQQVFVGDRVEMAVEVSEEG-AQVMWMK-NGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRG 80 (101)
T ss_dssp CCCCCEEE---CCCCEEEESSCCCBCCEEESCSS-CCCEEEE-SSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCS
T ss_pred cCCCEEEe---cCCceEEcCCCCEEEEEEEeCCC-CEEEEEE-CCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCE
Confidence 35777777 67778899999999999999888 8999999 8887765442 12221111 24666666666666
Q ss_pred EEEEEEEe
Q psy15390 81 AYLCIATK 88 (142)
Q Consensus 81 ~y~C~~~~ 88 (142)
.|.|.+.|
T Consensus 81 ~Y~C~a~n 88 (101)
T 2edk_A 81 RYQVITNG 88 (101)
T ss_dssp BEEEECSS
T ss_pred EEEEEEcC
Confidence 66665543
No 232
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.53 E-value=2.1e-14 Score=91.28 Aligned_cols=71 Identities=20% Similarity=0.429 Sum_probs=49.5
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Ccc---e-ec----C---------CcceEEeec-----cceEEEe
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQP---I-SI----N---------KRKKVHMHY-----GEQLNIT 72 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~---~-~~----~---------~~~~~~~~~-----~~~l~i~ 72 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +.. + .. + ...++.... ...|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 4566889999999999998765 6789999842 221 1 00 0 012322221 1379999
Q ss_pred ecCCCCCeEEEEEEEe
Q psy15390 73 KISRTEMGAYLCIATK 88 (142)
Q Consensus 73 ~v~~~d~G~y~C~~~~ 88 (142)
+++.+|+|.|.|.+.+
T Consensus 87 ~v~~~D~G~Y~C~~~~ 102 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGG 102 (220)
T ss_dssp SCCGGGCEEEEEEEEC
T ss_pred cCCHHHCEEEEEEEec
Confidence 9999999999999875
No 233
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.53 E-value=2.6e-13 Score=89.94 Aligned_cols=71 Identities=14% Similarity=0.407 Sum_probs=48.2
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEee-----ccceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMH-----YGEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~-----~~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. +..+. .....++... ...+|.|.++
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 108 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL 108 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC
T ss_pred CCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC
Confidence 4467899999999999998765 4689999842 22110 0001121111 1247999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 109 ~~~DsG~Y~C~~~~ 122 (291)
T 2gki_A 109 TSEDSAVYYCARGA 122 (291)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred CHHHCEEEEEEEec
Confidence 99999999998643
No 234
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.53 E-value=1.2e-13 Score=76.90 Aligned_cols=74 Identities=18% Similarity=0.325 Sum_probs=49.8
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C~~ 86 (142)
.|.|.. .+....+.+|+++.|.|.+ +.+.+.+.|++ ++..+....+..+..... ..|.|.+++..|+|.|.|.+
T Consensus 8 ~~~~~~---~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k-~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 8 VSAFSK---KPRSVEVAAGSPAVFEAET-ERAGVKVRWQR-GGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCCSB---CCCCEEEETTSCEEEEEEC-SSSSCCCEEEC-SSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred CCeeEe---CCCcEEEeCCCcEEEEEEe-CCCCCeEEEEE-CCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 356665 6778889999999999999 67788999999 888775544333222111 24555555555555555554
No 235
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.52 E-value=3.1e-13 Score=76.62 Aligned_cols=100 Identities=15% Similarity=0.313 Sum_probs=62.3
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCc-ceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQ-PISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~-~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
..+|.+.. .+..+.+.+|++++|.|.+.+.+.+.+.|++ ++. .+...... ...+..+.+..
T Consensus 4 ~~~p~~~~---~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~-~~~~~~~~~~~~---~~~~~r~~~~~----------- 65 (108)
T 3m45_A 4 KGSQGQFP---LTQNVTVVEGGTAILTCRVDQNDNTSLQWSN-PAQQTLYFDDKK---ALRDNRIELVR----------- 65 (108)
T ss_dssp ----CCCE---ECCCEEEETTSCEEEEEEESSCSSCCEEEEC-TTCCEEEETTEE---CSCCTTEEEEE-----------
T ss_pred ccCCCccc---cCCeeEEEeCCcEEEEeEEcCCCccEEEEEc-CCCceEEEcCCc---ccccCcEEEee-----------
Confidence 34566666 6778899999999999999998888999999 444 22111100 00000011100
Q ss_pred EEEecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 85 IATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 85 ~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.......|.|.+++.+|+|.|+|.|.| .+. .+..+.|.|
T Consensus 66 ----------------~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~-~~~~~~L~V 104 (108)
T 3m45_A 66 ----------------ASWHELSISVSDVSLSDEGQYTCSLFT-MPV-KTSKAYLTV 104 (108)
T ss_dssp ----------------ESSSEEEEEECSCCGGGCEEEEEEECS-SSC-EEEEEEEEE
T ss_pred ----------------cCCCcEEEEECCCChhHCeEEEEEEEc-CCC-cEEEEEEEE
Confidence 011234688889999999999999988 553 566666665
No 236
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.52 E-value=1e-13 Score=90.55 Aligned_cols=71 Identities=20% Similarity=0.302 Sum_probs=49.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec-CCccee------------cC-Cc-ceEEeec----cceEEEeecCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE-DNQPIS------------IN-KR-KKVHMHY----GEQLNITKISRT 77 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~-~~~~~~------------~~-~~-~~~~~~~----~~~l~i~~v~~~ 77 (142)
.+..+.+.+|++++|.|.+. .+.+.+.|++. .+.... .. .. .++.... +.+|.|.+++.+
T Consensus 32 ~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 110 (268)
T 3pl6_D 32 TPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERG 110 (268)
T ss_dssp CCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGG
T ss_pred CCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcc
Confidence 56778899999999999986 56678999982 111110 00 00 2222222 347999999999
Q ss_pred CCeEEEEEEEe
Q psy15390 78 EMGAYLCIATK 88 (142)
Q Consensus 78 d~G~y~C~~~~ 88 (142)
|+|.|.|.+.+
T Consensus 111 D~G~Y~C~~~~ 121 (268)
T 3pl6_D 111 DSAVYLCATSA 121 (268)
T ss_dssp GCEEEEEEEES
T ss_pred cCEEEEEEEec
Confidence 99999999875
No 237
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.52 E-value=7.3e-14 Score=82.82 Aligned_cols=45 Identities=29% Similarity=0.417 Sum_probs=37.3
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcce
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPI 53 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~ 53 (142)
...||.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+
T Consensus 18 ~~~pP~~~~---~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~~~~~ 62 (137)
T 3qr2_A 18 GSHMAGFVQ---APLSQQRWVGGSVELHCEAVGSPVPEIQWWF-EGQGP 62 (137)
T ss_dssp ---CCEEEE---CCCCEEEETTSCEEEEEEEECSSCCEEEEEE-EESST
T ss_pred CCCCCeEEc---CCCCEEEeCCCCEEEEEEEeeecCCeEEEEE-CCCCc
Confidence 346899988 7888899999999999999999999999999 55543
No 238
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.52 E-value=1e-13 Score=78.20 Aligned_cols=76 Identities=21% Similarity=0.350 Sum_probs=56.6
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYL 83 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~ 83 (142)
...||.|.. .+....+.+|+++.|.|.+.+.|.+ +.|++ ++..+....+..+..... ..|.|.+++..|+|.|.
T Consensus 5 ~~~pp~~~~---~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 79 (103)
T 2e7b_A 5 SSGPVRFQE---ALKDLEVLEGGAATLRCVLSSVAAP-VKWCY-GNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYS 79 (103)
T ss_dssp CCCCCCCTB---CCCCEEEESSSCEEEEEECSSCCCS-CEEEE-SSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEE
T ss_pred CCCCCEEEe---cCccEEEECCCcEEEEEEEeCCCCC-eEEEE-CCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEE
Confidence 446788877 6778899999999999999998888 99999 887775444333221111 24888888888888888
Q ss_pred EE
Q psy15390 84 CI 85 (142)
Q Consensus 84 C~ 85 (142)
|.
T Consensus 80 C~ 81 (103)
T 2e7b_A 80 CS 81 (103)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 239
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.52 E-value=3.7e-13 Score=88.07 Aligned_cols=78 Identities=15% Similarity=0.311 Sum_probs=53.2
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCC-----CCeeEEEecC-Ccce---ec-------CCcceEEee---ccce
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFP-----APEIKWRRED-NQPI---SI-------NKRKKVHMH---YGEQ 68 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~-----~~~~~w~~~~-~~~~---~~-------~~~~~~~~~---~~~~ 68 (142)
.+.+.. .+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+ .. ....++... ....
T Consensus 15 ~~~v~~---~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~ 91 (268)
T 1x9q_A 15 DVVMTQ---TPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFT 91 (268)
T ss_dssp CCCEEE---ECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE
T ss_pred cceEEe---eCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEE
Confidence 344555 56777889999999999998776 4689999842 2211 10 011222222 1237
Q ss_pred EEEeecCCCCCeEEEEEEEe
Q psy15390 69 LNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 69 l~i~~v~~~d~G~y~C~~~~ 88 (142)
|.|.+++.+|+|.|.|.+.+
T Consensus 92 L~I~~v~~~DsG~Y~C~~~~ 111 (268)
T 1x9q_A 92 LKINRVEAEDLGVYFCSQST 111 (268)
T ss_dssp EEESSCCGGGCEEEEEEECS
T ss_pred EEECCCChhHCEEEEEEEec
Confidence 99999999999999999764
No 240
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=1.6e-13 Score=77.76 Aligned_cols=77 Identities=19% Similarity=0.306 Sum_probs=51.2
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecC-CcceEEeecc-ceEEEeecCCCCCeEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISIN-KRKKVHMHYG-EQLNITKISRTEMGAYL 83 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~-~~l~i~~v~~~d~G~y~ 83 (142)
..+|.|..+ .+....+.+|+++.|.|.+ +.|.+.+.|++ +|..+... .+..+....+ ..|.|.++..+|+|.|.
T Consensus 13 ~~~p~f~~~--~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (104)
T 1pd6_A 13 KKSTAFQKK--LEPAYQVSKGHKIRLTVEL-ADHDAEVKWLK-NGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQ 88 (104)
T ss_dssp STTSSCSEE--CCSEEEEETTSCEEEEEEC-SSSSSCCEEEE-SSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEE
T ss_pred cCCCEEEEc--CCCcEEEecCCCEEEEEEE-cCCCCEEEEEE-CCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEE
Confidence 456777762 3344789999999999999 67888899999 88877654 3333221111 15666666666666666
Q ss_pred EEE
Q psy15390 84 CIA 86 (142)
Q Consensus 84 C~~ 86 (142)
|.+
T Consensus 89 C~a 91 (104)
T 1pd6_A 89 CVV 91 (104)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 241
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.52 E-value=2.2e-13 Score=76.50 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=55.9
Q ss_pred CCCeeeecCCCCce-eEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEE
Q psy15390 7 VPPNILDTESTPSS-VAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLC 84 (142)
Q Consensus 7 ~~p~~~~~~~~~~~-~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C 84 (142)
.+|.|.. .+.. ..+.+|+++.|.|.+. .|.+.+.|++ ++..+....+..+..... ..|.|.+++..|+|.|.|
T Consensus 6 ~~p~~~~---~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k-~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 80 (100)
T 2yuv_A 6 SGAAFAK---ILDPAYQVDKGGRVRFVVELA-DPKLEVKWYK-NGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYV 80 (100)
T ss_dssp SSCCEEE---CCCSCEEECTTEEEEEEEEES-CTTSCEEEEE-SSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEE
T ss_pred CCCeEEe---cCCCccEEcCCCcEEEEEEec-CCCceEEEEE-CCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEE
Confidence 5788877 4554 6788999999999998 6888999999 888776544433322221 358888888888888888
Q ss_pred EE
Q psy15390 85 IA 86 (142)
Q Consensus 85 ~~ 86 (142)
.+
T Consensus 81 ~a 82 (100)
T 2yuv_A 81 TA 82 (100)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 242
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.51 E-value=1.7e-13 Score=88.35 Aligned_cols=72 Identities=19% Similarity=0.356 Sum_probs=51.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee------------c--CCcceEEe--eccceEEEeecCCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS------------I--NKRKKVHM--HYGEQLNITKISRTEM 79 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~------------~--~~~~~~~~--~~~~~l~i~~v~~~d~ 79 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.. +.... . ..+..+.. ....+|.|.+++.+|+
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 86 (245)
T 3nfj_J 7 WPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDS 86 (245)
T ss_dssp ECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGC
T ss_pred CCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhC
Confidence 567788999999999999998888899999821 11110 0 01111111 1223799999999999
Q ss_pred eEEEEEEEe
Q psy15390 80 GAYLCIATK 88 (142)
Q Consensus 80 G~y~C~~~~ 88 (142)
|.|.|.+.+
T Consensus 87 G~Y~C~~~~ 95 (245)
T 3nfj_J 87 GFYLCAWSV 95 (245)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEee
Confidence 999999987
No 243
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.51 E-value=5.8e-13 Score=84.81 Aligned_cols=71 Identities=18% Similarity=0.366 Sum_probs=49.0
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Ccce---e------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPI---S------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~---~------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. +..+ . .....++.... ...|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 3457889999999999998755 5689999842 2211 0 00112333322 237999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~ 100 (220)
T 2fbj_H 87 RSEDTALYYCARLH 100 (220)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred ChhhCEEEEEEEec
Confidence 99999999998764
No 244
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.51 E-value=2.7e-13 Score=75.37 Aligned_cols=36 Identities=22% Similarity=0.446 Sum_probs=29.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI 55 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~ 55 (142)
.+....+.+|+++.|.|.+.+ .+.+.|++ ++..+..
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k-~g~~~~~ 42 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTK-DGVHLGP 42 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEE-TTEEECC
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEE-CCEECCC
Confidence 466778999999999999876 46899999 8877643
No 245
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=8.6e-14 Score=80.18 Aligned_cols=74 Identities=18% Similarity=0.315 Sum_probs=57.2
Q ss_pred CeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee--ccceEEEeecCCCCCeEEEEEE
Q psy15390 9 PNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH--YGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 9 p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+.|.. .+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+....+..+... ....|.|.++...|+|.|+|.+
T Consensus 14 ~~~~~---~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (115)
T 2cr6_A 14 VHIIE---DLEDVDVQEGSSATFRCRISPANYEPVHWFL-DKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA 89 (115)
T ss_dssp CEEEE---CCCEEEEETTSCEECCCEEESTTCCSCEEEE-SSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE
T ss_pred CeEec---cCccEEEeCCCcEEEEEEEcCCCCCccEEEE-CCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE
Confidence 36666 6788899999999999999999988999999 8887765544332211 1236888888888888888874
No 246
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.50 E-value=1.6e-13 Score=90.52 Aligned_cols=71 Identities=13% Similarity=0.372 Sum_probs=47.8
Q ss_pred CceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Cccee----cC-----------CcceEEeecc-----ceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQPIS----IN-----------KRKKVHMHYG-----EQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~~~----~~-----------~~~~~~~~~~-----~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+. +.+.+.|++.. +..+. .. ...++....+ ..|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 556788999999999999874 45689999732 11110 00 0112222211 36999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~ 100 (280)
T 3fku_X 87 RSEDTAVYYCARSP 100 (280)
T ss_dssp CSTTCEECCEEECS
T ss_pred ChhhCEEEEEEEec
Confidence 99999999999865
No 247
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.50 E-value=3e-13 Score=87.20 Aligned_cols=71 Identities=17% Similarity=0.229 Sum_probs=49.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec-CCcc------------eecCC-c-ceEEeec----cceEEEeecCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE-DNQP------------ISINK-R-KKVHMHY----GEQLNITKISRT 77 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~-~~~~------------~~~~~-~-~~~~~~~----~~~l~i~~v~~~ 77 (142)
.+..+.+.+|++++|.| ..+.+.+.+.|++. .+.. ..... . .++.... ..+|.|.+++.+
T Consensus 8 ~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 86 (245)
T 4ei6_B 8 IPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALE 86 (245)
T ss_dssp ECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGG
T ss_pred CCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHh
Confidence 56778899999999999 55677789999982 1111 11110 0 2222222 237999999999
Q ss_pred CCeEEEEEEEe
Q psy15390 78 EMGAYLCIATK 88 (142)
Q Consensus 78 d~G~y~C~~~~ 88 (142)
|+|.|.|.+.+
T Consensus 87 D~G~Y~C~~~~ 97 (245)
T 4ei6_B 87 DSAVYFCASSF 97 (245)
T ss_dssp GCEEEEEEEEC
T ss_pred HCEEEEEEEcc
Confidence 99999999873
No 248
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.50 E-value=1.8e-13 Score=77.88 Aligned_cols=78 Identities=18% Similarity=0.366 Sum_probs=58.5
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYL 83 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~ 83 (142)
...||.|.. .+....+.+|++++|.|.+.+. +.+.|++ ++..+....+..+..... ..|.|.+++.+|+|.|+
T Consensus 5 ~~~pp~~~~---~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 78 (108)
T 2dm7_A 5 SSGPARFTQ---DLKTKEASEGATATLQCELSKV--APVEWKK-GPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYS 78 (108)
T ss_dssp SCCCCCBCS---CCBCCEEETTSCEEEEEEBSSS--CCCEEES-SSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEE
T ss_pred cCCCCeeee---cCCcEEEeCCCcEEEEEEeCCC--CeeEEEE-CCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEE
Confidence 346888877 6778899999999999998754 6899999 777776544433322211 25899999999999999
Q ss_pred EEEEe
Q psy15390 84 CIATK 88 (142)
Q Consensus 84 C~~~~ 88 (142)
|.+.|
T Consensus 79 C~a~n 83 (108)
T 2dm7_A 79 CMCGQ 83 (108)
T ss_dssp EEETT
T ss_pred EEEcC
Confidence 98854
No 249
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=5.6e-13 Score=76.38 Aligned_cols=73 Identities=10% Similarity=0.164 Sum_probs=53.5
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCc-c-------eEEeeccc---eEEEeecC
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKR-K-------KVHMHYGE---QLNITKIS 75 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~-~-------~~~~~~~~---~l~i~~v~ 75 (142)
.+|.|.. .++...+.+|+++.|.|.+.+ .+.+.|++ +|+.+..... . ++.+..++ .|.|.+++
T Consensus 7 p~~~~~~---~l~d~~v~eG~~a~f~C~vs~--~p~v~W~k-nG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~ 80 (112)
T 2e6q_A 7 GTARLVA---GLEDVQVYDGEDAVFSLDLST--IIQGTWFL-NGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVK 80 (112)
T ss_dssp SCCCEEE---CCCCEEEETTCEEEEEEEESS--CCCCEEEE-SSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCC
T ss_pred CCcEEec---CCCCeEEcCCCcEEEEEEECC--CCeEEEEE-CCEECccCcccccccccccEEEEEeCCcEEEEEECCCC
Confidence 3567777 788899999999999999986 67899999 9998876541 1 33333222 57777777
Q ss_pred CCCCeEEEEE
Q psy15390 76 RTEMGAYLCI 85 (142)
Q Consensus 76 ~~d~G~y~C~ 85 (142)
.+|+|.|+|.
T Consensus 81 ~~D~G~Y~~~ 90 (112)
T 2e6q_A 81 HQDSGALVGF 90 (112)
T ss_dssp STTCSEEEEE
T ss_pred HHHCccEEEE
Confidence 7777777663
No 250
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.49 E-value=3.1e-13 Score=86.94 Aligned_cols=70 Identities=13% Similarity=0.362 Sum_probs=48.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccce-------------ecCCcceEEee----ccceEEEeecCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPI-------------SINKRKKVHMH----YGEQLNITKISRTE 78 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~-------------~~~~~~~~~~~----~~~~l~i~~v~~~d 78 (142)
.+..+.+.+|++++|.|.+.+ +.+.+.|++.. +... ......++... ...+|.|.+++..|
T Consensus 8 ~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 86 (240)
T 3q5y_A 8 SPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELED 86 (240)
T ss_dssp ECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGG
T ss_pred CcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhH
Confidence 566778999999999999875 66789999821 1110 00011122222 12369999999999
Q ss_pred CeEEEEEEE
Q psy15390 79 MGAYLCIAT 87 (142)
Q Consensus 79 ~G~y~C~~~ 87 (142)
+|.|.|.+.
T Consensus 87 ~G~Y~C~~~ 95 (240)
T 3q5y_A 87 SAMYFCASS 95 (240)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEc
Confidence 999999986
No 251
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.48 E-value=6.7e-14 Score=100.35 Aligned_cols=71 Identities=14% Similarity=0.269 Sum_probs=52.4
Q ss_pred CceeEEecCCcEEEEEEE-ecCCCCeeEEEecCCcceecC----------CcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 18 PSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQPISIN----------KRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+.+.+.+|++++|.|.+ .+.|.+.+.|++ ++..+... ...+.....+++|.|.+++..|+|.|+|.+
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~ 451 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAPKKPPQRLEWKL-NTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQA 451 (581)
T ss_dssp CEEEEEETTSCEEECCTTCCSSSSCEEEEEE-EETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEE
T ss_pred hcccceecCCcEEEeeeecCCCCCceEEEEE-cCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEE
Confidence 445778899999999998 677888999999 54422110 011223445568999999999999999998
Q ss_pred Eec
Q psy15390 87 TKI 89 (142)
Q Consensus 87 ~~~ 89 (142)
.+.
T Consensus 452 ~n~ 454 (581)
T 3o3u_N 452 MNR 454 (581)
T ss_dssp ECT
T ss_pred EcC
Confidence 764
No 252
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.48 E-value=3.8e-13 Score=78.47 Aligned_cols=64 Identities=16% Similarity=0.271 Sum_probs=45.1
Q ss_pred cCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee--------ccceEEEeecCCCCCeEEEEEEEec
Q psy15390 25 EEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH--------YGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 25 ~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--------~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
.+..+.|.|.+.|.|.|.+.|++ +|+.+....+...... ..+.|.|.++...|+|.|+|.+.|.
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~k-nG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~ 85 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLF-NGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANP 85 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEE-TTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEET
T ss_pred cCccEEEEEEEeeeCCCeEEEEE-CCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEEC
Confidence 57789999999999999999999 9988876544332221 1235666666666666666666664
No 253
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.1e-13 Score=78.01 Aligned_cols=80 Identities=20% Similarity=0.344 Sum_probs=52.5
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y~C 84 (142)
..|+.|..+...+..+.+.+|+++.|.|.+. .|.+.+.|++ +++.+....+..+.... ...|.|.++...|+|.|.|
T Consensus 6 ~pp~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 83 (102)
T 2eo1_A 6 SGKVVFAKEQPAHREVQAEAGASATLSCEVA-QAQTEVTWYK-DGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSC 83 (102)
T ss_dssp CCCCCSCSSCCSCEEEEEETTCCEEECCBCS-CSSSCCEEEE-TTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEE
T ss_pred CCCEEecCcCCCcccEEEeCCCcEEEEEEec-CCCCceEEEE-CCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEE
Confidence 3455555432234566899999999999997 7788999999 88877554433322111 1356666666677777777
Q ss_pred EEE
Q psy15390 85 IAT 87 (142)
Q Consensus 85 ~~~ 87 (142)
.+.
T Consensus 84 ~a~ 86 (102)
T 2eo1_A 84 EAG 86 (102)
T ss_dssp EET
T ss_pred EcC
Confidence 654
No 254
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=3.3e-13 Score=77.29 Aligned_cols=83 Identities=18% Similarity=0.259 Sum_probs=58.3
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAY 82 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y 82 (142)
.+..||.+.........+.+.+|+++.|.|.+. .|.+.+.|++ +++.+....+..+.... ...|.|.+++.+|+|.|
T Consensus 6 ~v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 83 (113)
T 2cpc_A 6 SGTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTK-DGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEY 83 (113)
T ss_dssp CCCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEE-TTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEE
T ss_pred ccccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEE-CCEECccCCCEEEEECCCEEEEEECCCCcccCEEE
Confidence 344455554411122236788999999999995 7778999999 88877655444432222 24799999999999999
Q ss_pred EEEEEe
Q psy15390 83 LCIATK 88 (142)
Q Consensus 83 ~C~~~~ 88 (142)
.|.+.|
T Consensus 84 ~C~a~n 89 (113)
T 2cpc_A 84 LCEIDD 89 (113)
T ss_dssp EEESSS
T ss_pred EEEEec
Confidence 998877
No 255
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.48 E-value=1.5e-13 Score=85.29 Aligned_cols=83 Identities=17% Similarity=0.332 Sum_probs=67.6
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......+.....++.|.|.++...|+|.|+|
T Consensus 97 v~~~p~~~~---~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 172 (191)
T 1epf_A 97 IFQKLMFKN---APTPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRC 172 (191)
T ss_dssp EECCSEEEE---CCSSEECCTTSCEEECCEEECSSCCEEEEEE-TTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEE
T ss_pred eecCceEec---CCCcEeecCCCeEEEEEEECCCCCCEEEEEE-CCEEeeccCCceEEEecCCeEEECCCChhhCEEEEE
Confidence 345777776 6677788999999999999999999999999 887776544444455566789999999999999999
Q ss_pred EEEecCC
Q psy15390 85 IATKIGP 91 (142)
Q Consensus 85 ~~~~~~~ 91 (142)
.+.|...
T Consensus 173 ~a~n~~~ 179 (191)
T 1epf_A 173 EGRILAR 179 (191)
T ss_dssp EEEEGGG
T ss_pred EEEEecc
Confidence 9998643
No 256
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.48 E-value=6.4e-13 Score=76.16 Aligned_cols=74 Identities=16% Similarity=0.404 Sum_probs=54.7
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C~ 85 (142)
.||.+.. .+....+.+|+++.|.|.+.+. +.+.|++ ++..+....+..+..... ..|.|.++..+|+|.|.|.
T Consensus 18 ~pp~~~~---~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
T 2edh_A 18 LPIKFTE---GLRNEEATEGATAVLRCELSKM--APVEWWK-GHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCM 91 (113)
T ss_dssp SCCCEEE---CCCCCEECTTSCEEEEEEESSC--CCCEEEE-SSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEE
T ss_pred CCCcccc---cCCceEEeCCCeEEEEEEECCC--CcEEEEE-CCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEE
Confidence 3567776 6777889999999999999764 6899999 888776544333222111 2688888888888888887
Q ss_pred E
Q psy15390 86 A 86 (142)
Q Consensus 86 ~ 86 (142)
+
T Consensus 92 a 92 (113)
T 2edh_A 92 C 92 (113)
T ss_dssp E
T ss_pred e
Confidence 7
No 257
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.47 E-value=1.9e-14 Score=96.47 Aligned_cols=115 Identities=18% Similarity=0.331 Sum_probs=76.2
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCC---eeEEEecCCcceecCCcceE-----EeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAP---EIKWRREDNQPISINKRKKV-----HMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~---~~~w~~~~~~~~~~~~~~~~-----~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
.+....+.+|+++.|.|.+.+. |.+ .+.|++.++..+........ .....+.|.|.+++..|.|.|+|.+.
T Consensus 119 ~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~ 198 (323)
T 2wqr_A 119 RPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVT 198 (323)
T ss_dssp CCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEE
T ss_pred CCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEE
Confidence 3444457789999999999874 455 89999944555432211110 01123469999999999999999988
Q ss_pred ec-----------------------------------------------C-CccEEEEEEEecc-------------c--
Q psy15390 88 KI-----------------------------------------------G-PLKIFWEIIFHMH-------------Y-- 104 (142)
Q Consensus 88 ~~-----------------------------------------------~-~~~~~w~~~~~~~-------------~-- 104 (142)
|. + ...+.|.+..... .
T Consensus 199 n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g 278 (323)
T 2wqr_A 199 HPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGS 278 (323)
T ss_dssp CTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSS
T ss_pred CCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCC
Confidence 64 1 1257786521110 0
Q ss_pred ----cceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 105 ----GEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 105 ----~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
.+.|.|..+..+|+|.|+|.|.|....
T Consensus 279 ~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 279 GFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp SEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 124777778888999999999997654
No 258
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.47 E-value=9.7e-13 Score=83.64 Aligned_cols=71 Identities=17% Similarity=0.452 Sum_probs=47.8
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee-----------------cCCcceEEeecc-----ceEEEe
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS-----------------INKRKKVHMHYG-----EQLNIT 72 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~-----------------~~~~~~~~~~~~-----~~l~i~ 72 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. +..+. .....++....+ .+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp ESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 4456789999999999998643 5689999732 21110 001123222211 259999
Q ss_pred ecCCCCCeEEEEEEEe
Q psy15390 73 KISRTEMGAYLCIATK 88 (142)
Q Consensus 73 ~v~~~d~G~y~C~~~~ 88 (142)
+++.+|+|.|.|.+.+
T Consensus 87 ~v~~~DsG~Y~C~~~~ 102 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRG 102 (221)
T ss_dssp SCCGGGCEEEEEEEES
T ss_pred CCCHHHCEEEEEEEEC
Confidence 9999999999999864
No 259
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.47 E-value=1.1e-14 Score=84.80 Aligned_cols=101 Identities=22% Similarity=0.331 Sum_probs=65.1
Q ss_pred ccccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCe-eEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeE
Q psy15390 3 AYKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPE-IKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGA 81 (142)
Q Consensus 3 ~~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 81 (142)
..+..+|.+.. +....+.+|+.+.|.|.+.+.|.|. +.|++ ++..+......+ +.+.... .+.|
T Consensus 9 l~V~~~P~i~~----~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~-~~~~l~~~~~~~--------~~~~~~~-~~~~- 73 (122)
T 2cry_A 9 LTVNGPPIISS----TQTQHALHGEKGQIKCFIRSTPPPDRIAWSW-KENVLESGTSGR--------YTVETIS-TEEG- 73 (122)
T ss_dssp CCCCSSCCEEE----ECCCCCCTTSCCCCCEEECCSSCCSEEEEES-SSCEECSEEETT--------EEEEEEE-ETTE-
T ss_pred EEEecCCCccC----CCeEEEecCCCEEEEEEEeecCCCcEeEEEE-CCEEccCCCCCC--------EEEEEec-CCCc-
Confidence 35667888765 3455688999999999999999887 99999 776654321111 1110000 0000
Q ss_pred EEEEEEecCCccEEEEEEEeccccceEEEccCCCCCC-eEEEEEEecCCCCCeeeEEEEEE
Q psy15390 82 YLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEM-GAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 82 y~C~~~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~-g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
....|.|.+++.+|+ |.|+|.|.|..|. .+..+.|.|
T Consensus 74 ----------------------~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~-~~~~~~l~V 111 (122)
T 2cry_A 74 ----------------------VISTLTISNIVRADFQTIYNCTAWNSFGS-DTEIIRLKE 111 (122)
T ss_dssp ----------------------EEEEEECTTCCHHHHHSCEEEEEECSSCE-EEEEECCCC
T ss_pred ----------------------eEEEEEEcCCChhhCCceEEEEEECCCCe-EEEEEEEEE
Confidence 022477788888887 8888888888875 455665554
No 260
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.47 E-value=2.3e-13 Score=84.31 Aligned_cols=84 Identities=17% Similarity=0.317 Sum_probs=64.7
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......++....++.|.|.++...|+|.|+|
T Consensus 93 v~~~p~~~~---~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 168 (189)
T 2v44_A 93 IYQKLTFRE---VVSPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRC 168 (189)
T ss_dssp EECCCEEES---CCCSEEEETTSCEEECCEEECSSCCEEEEEE-EC--CEECCCTTEEECTTSCEEETTCCGGGCEEEEE
T ss_pred EecCCceee---cCCcEEEeCCCCEEEEEEECcCCCCcEEEEE-CCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEE
Confidence 445676665 5566778899999999999999999999999 777665433334445566789999999999999999
Q ss_pred EEEecCCc
Q psy15390 85 IATKIGPL 92 (142)
Q Consensus 85 ~~~~~~~~ 92 (142)
.+.|....
T Consensus 169 ~a~n~~~~ 176 (189)
T 2v44_A 169 EGRVEARG 176 (189)
T ss_dssp EEEETTTT
T ss_pred EEEccccC
Confidence 99986543
No 261
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.46 E-value=6.5e-14 Score=94.63 Aligned_cols=71 Identities=15% Similarity=0.448 Sum_probs=50.0
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. .....++.... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 4567889999999999998763 5689999842 33221 01122332221 247999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 87 ~~~D~G~Y~C~~~n 100 (344)
T 1za6_B 87 RSEDTAVYFCTRSL 100 (344)
T ss_dssp CGGGCEEEEEEETT
T ss_pred CcccCEEEEEEEec
Confidence 99999999999865
No 262
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.46 E-value=1.7e-12 Score=75.62 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=29.5
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCc
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQ 51 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~ 51 (142)
.+..+.+.+|++++|.|.+.+.|.+.+.|++.++.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~ 41 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGF 41 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSC
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCe
Confidence 45677899999999999999988899999984443
No 263
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=9.8e-13 Score=74.14 Aligned_cols=75 Identities=19% Similarity=0.366 Sum_probs=56.6
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y~C 84 (142)
..+|.|.. .+..+.+.+|+++.|.|.. +.|.+.+.|++ ++..+....+..+.... ...|.|.+++..|+|.|+|
T Consensus 6 ~~pp~~~~---~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k-~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 80 (103)
T 2dku_A 6 SGANCFTE---ELTNLQVEEKGTAVFTCKT-EHPAATVTWRK-GLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTC 80 (103)
T ss_dssp CCCCCCSS---CCCCEEEETTSEEEEEEEC-SSCCSCCEEEE-SSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEE
T ss_pred CCCCEeEe---cCCcEEEeCCCcEEEEEEe-CCCCCeEEEEe-CCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEE
Confidence 35777776 6788899999999999995 77888999999 88777655433322111 1268888888888888888
Q ss_pred E
Q psy15390 85 I 85 (142)
Q Consensus 85 ~ 85 (142)
.
T Consensus 81 ~ 81 (103)
T 2dku_A 81 D 81 (103)
T ss_dssp E
T ss_pred E
Confidence 7
No 264
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.46 E-value=3e-12 Score=81.66 Aligned_cols=71 Identities=17% Similarity=0.396 Sum_probs=49.2
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. +..+. .....|+.... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 3467889999999999998765 4679999842 22110 01122333221 237999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 87 ~~~D~G~Y~C~~~~ 100 (223)
T 1dee_B 87 RAEDTAVYYCAKVK 100 (223)
T ss_dssp CGGGCEEEEEEEES
T ss_pred CHHHCEEEEEEEec
Confidence 99999999999865
No 265
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.45 E-value=2.8e-13 Score=85.80 Aligned_cols=72 Identities=18% Similarity=0.382 Sum_probs=48.0
Q ss_pred CCceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Cccee--------------cCCcceEEeec---cceEEEeecCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQPIS--------------INKRKKVHMHY---GEQLNITKISR 76 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~~~--------------~~~~~~~~~~~---~~~l~i~~v~~ 76 (142)
.+..+.+.+|++++|.|.+.+. +.+.+.||+.. +.... .....++.... ...|.|.+++.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 3456788999999999999763 35689999732 22111 00112222221 12599999999
Q ss_pred CCCeEEEEEEEe
Q psy15390 77 TEMGAYLCIATK 88 (142)
Q Consensus 77 ~d~G~y~C~~~~ 88 (142)
+|+|.|.|.+.+
T Consensus 85 ~D~G~Y~C~~~~ 96 (215)
T 3nl4_H 85 EDTATYFCVRKY 96 (215)
T ss_dssp GGCEEEEEEEEC
T ss_pred ccCEEEEEEEec
Confidence 999999999864
No 266
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.45 E-value=3.4e-12 Score=74.01 Aligned_cols=34 Identities=12% Similarity=0.298 Sum_probs=26.7
Q ss_pred CceeEEecCCcEEEEEEEec--CCCCeeEEEecCCcc
Q psy15390 18 PSSVAVREEFNITLTCKAEG--FPAPEIKWRREDNQP 52 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~--~~~~~~~w~~~~~~~ 52 (142)
+..+.+.+|+++.|.|.+.+ .+.+.+.|++ ++..
T Consensus 15 ~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~-~~~~ 50 (122)
T 3s35_X 15 SHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSSK 50 (122)
T ss_dssp CSCEEEEETCCEEEEEEEEECTTCCCEEEEEC-SCTT
T ss_pred CCCEEEecCCeEEEEEEEEcCCCCcEEEEEEC-CCcc
Confidence 34457889999999999998 4446789999 6554
No 267
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=2.3e-13 Score=76.33 Aligned_cols=68 Identities=21% Similarity=0.427 Sum_probs=45.6
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
.+..+.+.+|+.+.|.|.+.+.| +.+.|++ ++..+....+.. . .+..|.|.+++..|+|.|.|.+.|.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k-~g~~~~~~~~~~--~-~~~~L~i~~v~~~D~G~Y~C~a~n~ 76 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLAESNRTR--I-TGEEVEVQDSVPADSGLYACVTSSP 76 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEE-SSSBCCCCSSEE--E-CSSEEEETTCCTTTCEEEEEEEEET
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEE-CCEECCCCCcEE--E-ECCEEEEccCCHHHCEEEEEEEEeC
Confidence 34556788999999999998876 6999999 777664433222 1 1345666666666666666655553
No 268
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.44 E-value=3.2e-13 Score=88.39 Aligned_cols=71 Identities=17% Similarity=0.329 Sum_probs=49.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec-CCccee---c-CC---------cc-eEEee----ccceEEEeecCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE-DNQPIS---I-NK---------RK-KVHMH----YGEQLNITKISRT 77 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~-~~~~~~---~-~~---------~~-~~~~~----~~~~l~i~~v~~~ 77 (142)
.+..+.+.+|++++|.|.+.+ +.+.+.|++. .+.... . .. .. ++... .+.+|.|.+++..
T Consensus 33 ~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 111 (270)
T 3qib_D 33 TPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAG 111 (270)
T ss_dssp ECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGG
T ss_pred CCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHh
Confidence 566788999999999999865 6678999982 121110 0 00 00 22222 1347999999999
Q ss_pred CCeEEEEEEEe
Q psy15390 78 EMGAYLCIATK 88 (142)
Q Consensus 78 d~G~y~C~~~~ 88 (142)
|+|.|.|.+.+
T Consensus 112 D~G~Y~C~~~~ 122 (270)
T 3qib_D 112 DSALYLCASSL 122 (270)
T ss_dssp GCEEEEEEEES
T ss_pred HCeEEEEEEec
Confidence 99999999873
No 269
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.44 E-value=2.8e-12 Score=84.36 Aligned_cols=78 Identities=19% Similarity=0.353 Sum_probs=55.1
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee-------------c--CCcceEEeec----cc
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS-------------I--NKRKKVHMHY----GE 67 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~-------------~--~~~~~~~~~~----~~ 67 (142)
.+.+.. .+..+.+.+|++++|.|.+.+.+.+.+.|++.+ +.... . ....++.... ..
T Consensus 24 ~~~v~~---~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 100 (279)
T 2wbj_D 24 GAVVSQ---HPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLS 100 (279)
T ss_dssp CCCEEE---ECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEE
T ss_pred cceEEe---CCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEE
Confidence 345555 577888999999999999987777789999842 22110 0 0112332221 23
Q ss_pred eEEEeecCCCCCeEEEEEEEe
Q psy15390 68 QLNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 68 ~l~i~~v~~~d~G~y~C~~~~ 88 (142)
+|.|.+++.+|+|.|.|.+.+
T Consensus 101 sL~I~~v~~~D~G~Y~C~~~~ 121 (279)
T 2wbj_D 101 TLTVTSAHPEDSSFYICSARD 121 (279)
T ss_dssp EEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEccCCccCCEEEEEEEcc
Confidence 799999999999999999877
No 270
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.44 E-value=4.5e-13 Score=84.78 Aligned_cols=76 Identities=26% Similarity=0.414 Sum_probs=59.5
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecC-CCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGF-PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+|.|.. .. ...+.+|+++.|.|.+.+. |.+.+.|++ ++..+....+.. .......|.|.++..+|+|.|+|.+
T Consensus 117 ~P~~~~---~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k-~g~~l~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~a 190 (207)
T 3rbs_A 117 GPHFVE---YL-SWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVDEKHD-FKDGICTLLITEFSKKDAGIYEVIL 190 (207)
T ss_dssp SSEEEE---EE-EEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECCCCCCC-CSSEEEEEEETTCCGGGCEEEEEEE
T ss_pred CCceEe---cC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEE-CCEECCCCCceE-cCCCEEEEEECCCCcccCEEEEEEE
Confidence 677765 23 4678899999999999998 899999999 888886543221 1112246999999999999999999
Q ss_pred Eec
Q psy15390 87 TKI 89 (142)
Q Consensus 87 ~~~ 89 (142)
.|.
T Consensus 191 ~N~ 193 (207)
T 3rbs_A 191 KDD 193 (207)
T ss_dssp EET
T ss_pred EcC
Confidence 985
No 271
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=5.7e-12 Score=81.29 Aligned_cols=72 Identities=19% Similarity=0.357 Sum_probs=51.2
Q ss_pred CCceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Ccce---e-----------cC-CcceEEee-----ccceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQPI---S-----------IN-KRKKVHMH-----YGEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~~---~-----------~~-~~~~~~~~-----~~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+. +.+.+.|++.. +..+ . .+ ...++... ...+|.|.+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (242)
T 1hxm_B 7 PQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHN 86 (242)
T ss_dssp CCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECS
T ss_pred CCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECC
Confidence 5778889999999999999875 56689999842 2211 0 00 12233222 134799999
Q ss_pred cCCCCCeEEEEEEEe
Q psy15390 74 ISRTEMGAYLCIATK 88 (142)
Q Consensus 74 v~~~d~G~y~C~~~~ 88 (142)
++.+|+|.|.|.+.+
T Consensus 87 v~~~D~G~Y~C~~~~ 101 (242)
T 1hxm_B 87 VEKQDIATYYCALWE 101 (242)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CCcccCEEEEEeeec
Confidence 999999999998864
No 272
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.43 E-value=4.9e-12 Score=81.18 Aligned_cols=70 Identities=14% Similarity=0.300 Sum_probs=48.3
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee--------------cCCcceEEeec-----cceEEEeecC
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS--------------INKRKKVHMHY-----GEQLNITKIS 75 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~--------------~~~~~~~~~~~-----~~~l~i~~v~ 75 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.||+.. +..+. .....++.... ...|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 3456789999999999998754 5689999842 22110 00112332221 2279999999
Q ss_pred CCCCeEEEEEEE
Q psy15390 76 RTEMGAYLCIAT 87 (142)
Q Consensus 76 ~~d~G~y~C~~~ 87 (142)
.+|+|.|.|.+.
T Consensus 87 ~~D~G~Y~C~~~ 98 (232)
T 1dn0_B 87 AADTAVYYCARP 98 (232)
T ss_dssp GGGCEEEEEEEC
T ss_pred cccCEEEEEEEe
Confidence 999999999986
No 273
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.43 E-value=1.4e-13 Score=92.27 Aligned_cols=103 Identities=18% Similarity=0.301 Sum_probs=70.7
Q ss_pred CcEEEEEEEecC-C-CCeeEEEecCCcceecCCcce-EEeec-----cceEEEeecCCCCCeEEEEEEEec---------
Q psy15390 27 FNITLTCKAEGF-P-APEIKWRREDNQPISINKRKK-VHMHY-----GEQLNITKISRTEMGAYLCIATKI--------- 89 (142)
Q Consensus 27 ~~v~l~C~~~~~-~-~~~~~w~~~~~~~~~~~~~~~-~~~~~-----~~~l~i~~v~~~d~G~y~C~~~~~--------- 89 (142)
+.+.|.|.+.+. | .+.+.|++ +|..+....... ..... .+.|.|.++...|.|.|+|.+.|.
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k-~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 103 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLE-DGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTK 103 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEE-TTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeCeECCCeEEEEEE-CCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeee
Confidence 699999999885 3 46899999 888775432111 11111 124677777778999999998863
Q ss_pred --------------------------------------CCc---cEEEEEEE-ec----------c------ccceEEEc
Q psy15390 90 --------------------------------------GPL---KIFWEIIF-HM----------H------YGEQLNIT 111 (142)
Q Consensus 90 --------------------------------------~~~---~~~w~~~~-~~----------~------~~~~l~i~ 111 (142)
+.+ .+.|.+.. .. . ..+.|.|.
T Consensus 104 ~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~ 183 (323)
T 2wqr_A 104 KCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVG 183 (323)
T ss_dssp CCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECC
T ss_pred cCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEEC
Confidence 123 78897521 11 0 12258888
Q ss_pred cCCCCCCeEEEEEEecCCC
Q psy15390 112 KISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 112 ~~~~~d~g~y~C~a~n~~~ 130 (142)
.+..+|+|.|+|.|.|..+
T Consensus 184 ~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 184 TRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp HHHHHTTCCEEEEEECTTS
T ss_pred HHHccCCCCEEEEEECCCC
Confidence 8999999999999999764
No 274
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.41 E-value=1.2e-13 Score=87.18 Aligned_cols=66 Identities=11% Similarity=0.211 Sum_probs=46.2
Q ss_pred EecCCcEEEEEEEecCC----CCeeEEEecCCcceecCCc---ceE---EeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 23 VREEFNITLTCKAEGFP----APEIKWRREDNQPISINKR---KKV---HMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~~----~~~~~w~~~~~~~~~~~~~---~~~---~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
+.+|++++|.|.+.+.+ ...+.|++ ++..+..... .+. .....+.|.|.+++..|+|.|.|.+.+.
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~ 90 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFV-DDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSA 90 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEE-TTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECT
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEE-CCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEcc
Confidence 77899999999998774 24899999 6655432110 000 0112246999999999999999998753
No 275
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.40 E-value=1.3e-12 Score=90.86 Aligned_cols=71 Identities=14% Similarity=0.348 Sum_probs=49.4
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. .....++.... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (444)
T 1igt_B 7 SGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL 86 (444)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC
Confidence 4456789999999999998764 5679999842 33211 00112332221 247999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 87 ~~~D~G~Y~C~~~~ 100 (444)
T 1igt_B 87 KSEDTAMYYCARHG 100 (444)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred CHHHCEEEEEEEec
Confidence 99999999999875
No 276
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.39 E-value=9.1e-12 Score=87.49 Aligned_cols=72 Identities=15% Similarity=0.415 Sum_probs=49.9
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.||+.. ++.+. .....++.... ...|.|.+
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (475)
T 1iga_A 7 QSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSS 86 (475)
T ss_pred cCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECC
Confidence 56678899999999999998754 5579999842 22110 00112332221 24799999
Q ss_pred cCCCCCeEEEEEEEe
Q psy15390 74 ISRTEMGAYLCIATK 88 (142)
Q Consensus 74 v~~~d~G~y~C~~~~ 88 (142)
++.+|+|.|.|.+.+
T Consensus 87 v~~~D~G~Y~C~~~~ 101 (475)
T 1iga_A 87 LRPEDTAVYYCARDP 101 (475)
T ss_pred CChhhCEEEEEEEec
Confidence 999999999998754
No 277
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.39 E-value=5.6e-12 Score=90.65 Aligned_cols=93 Identities=16% Similarity=0.326 Sum_probs=73.0
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
..|.+.. .+....+.+|+++.|.|.+.|.|.|.+.|++ +++.+....+..+...++
T Consensus 481 ~~P~~~~---~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k-~~~el~~s~~~~i~~~~~-------------------- 536 (573)
T 3uto_A 481 AQPRFIV---KPYGTEVGEGQSANFYCRVIASSPPVVTWHK-DDRELKQSVKYMKRYNGN-------------------- 536 (573)
T ss_dssp GSCEEEE---CCCCEEECTTSCEEEEEEEECSSCCEEEEEE-TTEECCSSSSEEEEEETT--------------------
T ss_pred cCCcccc---CCCCcEEeCCCcEEEEEEEEccCCCeEEEEE-CCEEcccCCcEEEEEcCC--------------------
Confidence 4677777 6778889999999999999999999999999 888776544333222111
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
...|.|..+...|+|.|+|+|.|..|. .+..+.|+|.
T Consensus 537 ------------------~~~L~I~~~~~~D~G~Yt~~A~N~~G~-~~~~v~l~Vt 573 (573)
T 3uto_A 537 ------------------DYGLTINRVKGDDKGEYTVRAKNSYGT-KEEIVFLNVT 573 (573)
T ss_dssp ------------------EEEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEC
T ss_pred ------------------EEEEEEcCCCcccCcEEEEEEEeCCCc-EEEEEEEEEC
Confidence 235888889999999999999999996 7888888874
No 278
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.39 E-value=2.3e-13 Score=85.93 Aligned_cols=84 Identities=12% Similarity=0.157 Sum_probs=56.9
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceec-CCcceEEeeccce---EEEeecCCCCCe
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI-NKRKKVHMHYGEQ---LNITKISRTEMG 80 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~---l~i~~v~~~d~G 80 (142)
|..||.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|++.++..... ....++....+++ +.|.+++.+|+|
T Consensus 103 V~~p~~~~~---~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G 179 (203)
T 4fa8_A 103 VVKPLTLSV---HSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHL 179 (203)
T ss_dssp EEEEEEEEE---EEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCC
T ss_pred ecCCceeee---cceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCE
Confidence 445666665 566677889999999999999999999998844443322 2223333444554 455799999999
Q ss_pred EEEEEEEecCC
Q psy15390 81 AYLCIATKIGP 91 (142)
Q Consensus 81 ~y~C~~~~~~~ 91 (142)
.|+|.+.|...
T Consensus 180 ~YtC~A~N~~G 190 (203)
T 4fa8_A 180 PVTCVGKNDKE 190 (203)
T ss_dssp CEEEEEESSSC
T ss_pred EEEEEEEcCCC
Confidence 99999998644
No 279
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.39 E-value=3.7e-12 Score=83.23 Aligned_cols=72 Identities=15% Similarity=0.413 Sum_probs=50.9
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee-----c----------CCcceEEee-----ccceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS-----I----------NKRKKVHMH-----YGEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~-----~----------~~~~~~~~~-----~~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.. +..+. . ....|+... ....|.|.+
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 45677899999999999998765 5689999842 22221 0 011232222 124799999
Q ss_pred cCCCCCeEEEEEEEe
Q psy15390 74 ISRTEMGAYLCIATK 88 (142)
Q Consensus 74 v~~~d~G~y~C~~~~ 88 (142)
++.+|+|.|.|.+.+
T Consensus 92 v~~~DsG~Y~C~~~~ 106 (261)
T 2xqy_G 92 LTSEDSAVYYCGRLG 106 (261)
T ss_dssp CCGGGCEEEEEEEEC
T ss_pred CCcccCeEEEEEEec
Confidence 999999999999876
No 280
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.39 E-value=7e-12 Score=78.80 Aligned_cols=73 Identities=22% Similarity=0.472 Sum_probs=59.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc--ceEEEeecCCCCCeEEEEEEEecC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG--EQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
.+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....+..+....+ ..|.|.+++..|+|.|.|.+.|..
T Consensus 123 ~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~ 197 (212)
T 2r15_A 123 LPDVVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKY 197 (212)
T ss_dssp CCSEEEEETTCCEEEEEEEECSSCCEEEEEE-TTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCcEEEccCCeEEEEEEEcCCCCceEEEEE-CCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCC
Confidence 4667789999999999999999999999999 888877655444333322 379999999999999999999863
No 281
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.38 E-value=5.6e-12 Score=81.78 Aligned_cols=71 Identities=11% Similarity=0.184 Sum_probs=49.3
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec-CCcce---ec-CC---------cc-eEEeeccce--EEEeecCCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE-DNQPI---SI-NK---------RK-KVHMHYGEQ--LNITKISRTEM 79 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~-~~~~~---~~-~~---------~~-~~~~~~~~~--l~i~~v~~~d~ 79 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.||+. .+... .. .. .. ++....... |.|.+++.+|+
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~Ds 86 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQG 86 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSC
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhC
Confidence 45677899999999999988888889999973 12111 00 00 01 332222222 99999999999
Q ss_pred eEEEEEEE
Q psy15390 80 GAYLCIAT 87 (142)
Q Consensus 80 G~y~C~~~ 87 (142)
|.|.|.+.
T Consensus 87 G~Y~C~~~ 94 (253)
T 3to4_D 87 RTLYCTSS 94 (253)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 99999985
No 282
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.38 E-value=5.9e-12 Score=77.63 Aligned_cols=84 Identities=20% Similarity=0.414 Sum_probs=62.1
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCC-CCeeEEEe---cCCcceecCCcceEEeec---cceEEEeecC-
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFP-APEIKWRR---EDNQPISINKRKKVHMHY---GEQLNITKIS- 75 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~-~~~~~w~~---~~~~~~~~~~~~~~~~~~---~~~l~i~~v~- 75 (142)
.+..+|.+.. .+....+.+|+.+.|.|.+.+.| .+.+.|++ .+...+......++.... ...|.|.+++
T Consensus 79 ~V~~~P~~~~---~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 155 (184)
T 3b5h_A 79 QLHGPPRVKA---VKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNM 155 (184)
T ss_dssp EECCSCCCEE---SCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCT
T ss_pred EEecCCceee---cCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccc
Confidence 4557888877 56677889999999999999988 78999999 344333322222222222 2379999999
Q ss_pred CCCCeEEEEEEEecC
Q psy15390 76 RTEMGAYLCIATKIG 90 (142)
Q Consensus 76 ~~d~G~y~C~~~~~~ 90 (142)
..|+|.|.|.+.|..
T Consensus 156 ~~d~G~Y~C~a~N~~ 170 (184)
T 3b5h_A 156 EADPGQYRCNGTSSK 170 (184)
T ss_dssp TTSSEEEEEEEEETT
T ss_pred cccCceEEEEEEeCC
Confidence 899999999999853
No 283
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.38 E-value=2.8e-13 Score=86.94 Aligned_cols=80 Identities=11% Similarity=0.253 Sum_probs=53.4
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecC-CC-C-eeEEEecCCcce-ecCCcceEEee------ccceEEEeecC
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGF-PA-P-EIKWRREDNQPI-SINKRKKVHMH------YGEQLNITKIS 75 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-~~-~-~~~w~~~~~~~~-~~~~~~~~~~~------~~~~l~i~~v~ 75 (142)
..+|.+... .+....+.+|++++|.|.+.+. |. + .+.|++ +|..+ ..... ..... ....|.|.+++
T Consensus 10 ~~~P~v~~~--~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~-~g~~~~~~~~~-~~~~~~~g~~~~~s~L~I~~~~ 85 (231)
T 2w59_A 10 CSPIQLYAI--PPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTR-EKSGNLRPDPM-VLQEHFNGTYSASSAVPVSTQD 85 (231)
T ss_dssp --CCEEEEE--CCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEEC-SSSSCCCCCCC-EEEECTTSCEEEEEEEECCHHH
T ss_pred CCCCEEEEe--CcChhhcccCCceEEEEEEeCccCCCCeEEEEEc-CCeeccccccc-cceECCCCcEEEEEEEEecchh
Confidence 346665432 4555667789999999999884 53 4 899998 77766 22211 11111 12358899999
Q ss_pred CCCCeEEEEEEEec
Q psy15390 76 RTEMGAYLCIATKI 89 (142)
Q Consensus 76 ~~d~G~y~C~~~~~ 89 (142)
..|.|.|+|.+.+.
T Consensus 86 ~~D~g~Y~C~~~~~ 99 (231)
T 2w59_A 86 WLSGERFTCTVQHE 99 (231)
T ss_dssp HHTTCCEEEEEECT
T ss_pred ccCCCEEEEEEEcC
Confidence 99999999998753
No 284
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.38 E-value=7.7e-13 Score=85.93 Aligned_cols=71 Identities=15% Similarity=0.383 Sum_probs=47.0
Q ss_pred CceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+. +...+.|++.. +.... .....|+.... ..+|.|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 445788999999999999763 34579999832 11110 00111222221 124999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~ 100 (253)
T 3liz_H 87 KSEDTAMYYCTRDP 100 (253)
T ss_dssp CGGGCEEEEEEECC
T ss_pred ChhhCEEEEEEEec
Confidence 99999999999864
No 285
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.37 E-value=5.6e-12 Score=85.91 Aligned_cols=106 Identities=14% Similarity=0.175 Sum_probs=59.2
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecC-CcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISIN-KRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIF 95 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~ 95 (142)
.+..+.+.+|+++.|.|.+.+ |.+.+.|++.++...... ...++.. .+++|.|.+++.+|+|.|+|.+.|.......
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~ 329 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQVEDGGVYTCYAMGETFNETL 329 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCTTSCEEEEEEEECSSCEEEE
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCcccCEEEEEEEecCCCccEE
Confidence 455678999999999999988 888999999444433322 1223344 6678999999999999999999987432211
Q ss_pred EEEEEeccccceEEEcc-CCCCCCeEEEEEEecCCCCCe
Q psy15390 96 WEIIFHMHYGEQLNITK-ISRTEMGAYLCIATNNVPPSV 133 (142)
Q Consensus 96 w~~~~~~~~~~~l~i~~-~~~~d~g~y~C~a~n~~~~~~ 133 (142)
... +.+.. ...++...+.|.|.+.+.+.+
T Consensus 330 -~~~--------l~V~~~~~~g~~~~l~C~~~g~P~P~i 359 (361)
T 2xot_A 330 -SVE--------LKVYNFTLHGHHDTLNAAADPWSHPQF 359 (361)
T ss_dssp -EEE--------EEEESSCCC------------------
T ss_pred -EEE--------EEEEeeeccCCceEEEEEeCCCCCCcc
Confidence 111 11111 234445689999998876643
No 286
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.36 E-value=1.2e-10 Score=73.76 Aligned_cols=101 Identities=18% Similarity=0.255 Sum_probs=66.8
Q ss_pred eeEEecCCcEEEEEEEecCCCC--eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccE-EE
Q psy15390 20 SVAVREEFNITLTCKAEGFPAP--EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKI-FW 96 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~-~w 96 (142)
.+.+.+|++++|.|.+ +.|.+ .+.|++.+ ..+ + +.. .......|.|.+++.+|+|.|.|.+.+.+.... .-
T Consensus 16 ~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~-~~l--~-~~~-~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~ 89 (210)
T 1gsm_A 16 VVAVALGASRQLTCRL-ACADRGASVQWRGLD-TSL--G-AVQ-SDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTV 89 (210)
T ss_dssp EEEEETTCCEEEEEEE-CCSSTTCEEEEESST-TTT--C-CEE-EESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEeCCCCEEEEEEC-CCCCCCcceEEeecc-ccc--C-cEE-ecCCccEEEECccCcccCceEEEEEEeCCCceEEEE
Confidence 4688999999999999 88777 89999843 223 1 111 123345799999999999999999998754321 11
Q ss_pred EEEEeccccceEEEc--cCCCCCCeEEEEEEecC
Q psy15390 97 EIIFHMHYGEQLNIT--KISRTEMGAYLCIATNN 128 (142)
Q Consensus 97 ~~~~~~~~~~~l~i~--~~~~~d~g~y~C~a~n~ 128 (142)
...+..... ...+. .+...+.. ++|.|.+.
T Consensus 90 ~ltV~~~P~-~~~i~~~~~~~g~~~-l~C~a~g~ 121 (210)
T 1gsm_A 90 QLLVYAFPN-QLTVSPAALVPGDPE-VACTAHKV 121 (210)
T ss_dssp EEEEEBCCS-EEEEESSSBCTTCCE-EEEEEEEE
T ss_pred EEEEEecCC-CcEEccceEEeCCce-EEEEeCCC
Confidence 222222211 22222 34455667 99999985
No 287
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.36 E-value=7e-12 Score=74.95 Aligned_cols=93 Identities=14% Similarity=0.217 Sum_probs=58.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIFW 96 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~w 96 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.+...+.. .+.. . .. .+.|. .
T Consensus 44 ~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~---------~~~~-~-----~~-~~r~~------------~ 95 (145)
T 1z9m_A 44 WTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYF---------GEKR-A-----LR-DNRIQ------------L 95 (145)
T ss_dssp BCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEE---------TTEE-C-----SC-CTTEE------------E
T ss_pred CCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEE---------CCce-e-----cc-cCCEE------------E
Confidence 567788999999999999998888899999733322210 0000 0 00 00011 0
Q ss_pred EEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 97 EIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 97 ~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.. .......|.|.+++.+|+|.|+|.|.|. +. .+..+.|.|
T Consensus 96 ~~--~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~-~~~~~~L~V 136 (145)
T 1z9m_A 96 VT--STPHELSISISNVALADEGEYTCSIFTM-PV-RTAKSLVTV 136 (145)
T ss_dssp EE--ECSSEEEEEECSCCGGGCEEEEEEECSS-SC-EEEEEEEEE
T ss_pred ec--CCCCeEEEEECCCChhhCEEEEEEEEcC-CC-ceEEEEEEE
Confidence 00 0112346888888888888888888888 54 566666665
No 288
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.36 E-value=4.5e-13 Score=93.24 Aligned_cols=66 Identities=12% Similarity=0.184 Sum_probs=48.4
Q ss_pred EecCCcEEEEEEEecCC----CCeeEEEecCCcceecCCcceEEe------eccceEEEeecCCCCCeEEEEEEEec
Q psy15390 23 VREEFNITLTCKAEGFP----APEIKWRREDNQPISINKRKKVHM------HYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~~----~~~~~w~~~~~~~~~~~~~~~~~~------~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
+.+|+++.|.|.+.+.+ .+.+.|++ ++..+.......... ...+.|.|.+++..|.|.|.|.+.|.
T Consensus 252 ~~~G~~~~L~C~~~g~~~~p~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~ 327 (444)
T 1igt_B 252 LMISLSPIVTCVVVDVSEDDPDVQISWFV-NNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNK 327 (444)
T ss_dssp HCTTSCCEEEEEEEEECTTCCCCEEEEEE-TTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECT
T ss_pred eecCCCcEEEEEEeecccCCCCeEEEEEE-CCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcC
Confidence 47899999999999873 35899999 776654322111111 12347999999999999999999864
No 289
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.36 E-value=2.3e-11 Score=69.14 Aligned_cols=100 Identities=16% Similarity=0.297 Sum_probs=58.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-CcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIF 95 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~ 95 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.. +..+ .......... .....+ .+.
T Consensus 7 ~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~------~~l~~~~~~~-----~~~~~~------------r~~ 63 (108)
T 1jhl_L 7 SPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTN------NLLIYSGSTL-----QSGIPS------------RFS 63 (108)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCC------EEEEETTTEE-----CTTCCT------------TEE
T ss_pred cCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCC------EEEEEcCCCc-----CCCCCc------------eEE
Confidence 466778999999999999998888899999832 1111 0001110000 000000 111
Q ss_pred EEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 96 WEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 96 w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.. .......|.|.+++.+|+|.|.|.|.|...........|.|+
T Consensus 64 ~~---~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~L~V~ 107 (108)
T 1jhl_L 64 GS---GSGTDFTLTISSLEPEDFAMYICQQHNEYPWTFGGGTKLEIK 107 (108)
T ss_dssp EE---ESSSEEEEEECSCCTTCCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred EE---ecCCEEEEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEE
Confidence 11 112234688889999999999999988643333445556664
No 290
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.36 E-value=1.2e-11 Score=76.92 Aligned_cols=77 Identities=21% Similarity=0.444 Sum_probs=61.4
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCC-eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAP-EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y 82 (142)
.+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++ ++..+...... ..++.|.|.+++ |+|.|
T Consensus 102 ~V~~~p~~~~---~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~~~~~~~----~~~~~L~i~~~~--d~G~Y 171 (195)
T 2c5d_C 102 GLEGLPYFLE---EPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQ-DAVPLATAPGH----GPQRSLHVPGLN--KTSSF 171 (195)
T ss_dssp EECCSCEEEE---CCCCEEECTTCCEEEEEEEECSSCCCEEEEEE-SSCBSSSSTTS----SCCEEEEECCCS--SCEEE
T ss_pred EEecCCeEEc---CCCcEEEcCCCEEEEEeECCCCCCCCEEEEEE-CCEeccCCCCc----CCCCeEEEcccc--cCceE
Confidence 3456788877 6667888999999999999999999 899999 77776543321 345679999887 89999
Q ss_pred EEEEEecC
Q psy15390 83 LCIATKIG 90 (142)
Q Consensus 83 ~C~~~~~~ 90 (142)
+|.+.|..
T Consensus 172 ~C~a~N~~ 179 (195)
T 2c5d_C 172 SCEAHNAK 179 (195)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 99999853
No 291
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.35 E-value=9.4e-12 Score=78.53 Aligned_cols=78 Identities=28% Similarity=0.497 Sum_probs=58.9
Q ss_pred CeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC-cceEEee---ccceEEEeecCCCCCeEEEE
Q psy15390 9 PNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK-RKKVHMH---YGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 9 p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~---~~~~l~i~~v~~~d~G~y~C 84 (142)
|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.... ..++... ..+.|.|.++...|+|.|+|
T Consensus 109 p~~~~---~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 184 (212)
T 2yd6_A 109 PTIDM---GPQLKVVERTRTATMLCAASGNPDPEITWFK-DFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYEC 184 (212)
T ss_dssp CEEEE---CCCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred ceeec---CCcceeEecCCCEEEEEEecCCCCCeEEEEE-CCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEE
Confidence 56655 5666778899999999999999999999999 887775431 1222222 23679999999999999999
Q ss_pred EEEecC
Q psy15390 85 IATKIG 90 (142)
Q Consensus 85 ~~~~~~ 90 (142)
.+.|..
T Consensus 185 ~a~N~~ 190 (212)
T 2yd6_A 185 VATNSA 190 (212)
T ss_dssp EEEETT
T ss_pred EEECCC
Confidence 999863
No 292
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.35 E-value=6.8e-12 Score=77.82 Aligned_cols=80 Identities=25% Similarity=0.377 Sum_probs=62.2
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc-ceEEEeecCCCCCeEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG-EQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C~ 85 (142)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....+........ ..|.|.++...|+|.|+|.
T Consensus 102 ~~p~~~~---~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 177 (194)
T 2a38_A 102 APPNFVQ---RLQSMTVRQGSQVRLQVRVTGIPTPVVKFYR-DGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVN 177 (194)
T ss_dssp EEEEEEE---CCCCEEECTTEEEEEEEEEEEESCCEEEEEE-TTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEE
T ss_pred CCCEEEe---CCccEEEcCCCEEEEEEEEEEecCCeEEEEE-CCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEE
Confidence 3566665 5667788999999999999999999999999 888776554433222221 2799999999999999999
Q ss_pred EEecC
Q psy15390 86 ATKIG 90 (142)
Q Consensus 86 ~~~~~ 90 (142)
+.|..
T Consensus 178 a~n~~ 182 (194)
T 2a38_A 178 ATNSV 182 (194)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99853
No 293
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.35 E-value=3.4e-12 Score=79.07 Aligned_cols=80 Identities=23% Similarity=0.521 Sum_probs=64.2
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C 84 (142)
+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.... +.....++.|.|.++...|+|.|+|
T Consensus 97 v~~~p~~~~---~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~--~~~~~~~~~L~i~~~~~~d~G~Y~C 170 (192)
T 2iep_A 97 VKMKPKITR---PPINVKIIEGLKAVLPCTTMGNPKPSVSWIK-GDSALRENS--RIAVLESGSLRIHNVQKEDAGQYRC 170 (192)
T ss_dssp EEEEEEEEE---CCCCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECCCCS--SEEECTTSCEEESSCCGGGCEEEEE
T ss_pred EEeCCcccc---CCcceEEeCCCcEEEEEEEeccCCceEEEEe-CCEEccCCC--cEEEecCCcEEEecCChhhCEEEEE
Confidence 345677766 5667788899999999999999988999999 877765443 2234456689999999999999999
Q ss_pred EEEecC
Q psy15390 85 IATKIG 90 (142)
Q Consensus 85 ~~~~~~ 90 (142)
.+.|..
T Consensus 171 ~a~n~~ 176 (192)
T 2iep_A 171 VAKNSL 176 (192)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 999853
No 294
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.35 E-value=8.4e-12 Score=78.70 Aligned_cols=76 Identities=24% Similarity=0.479 Sum_probs=61.1
Q ss_pred CeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEe
Q psy15390 9 PNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 9 p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~ 88 (142)
|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....... ...++.|.|.++...|+|.|+|.+.|
T Consensus 111 p~~~~---~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~N 184 (212)
T 2yd1_A 111 PVITQ---GPGTRVIEVGHTVLMTCKAIGNPTPNIYWIK-NQTKVDMSNPRY--SLKDGFLQIENSREEDQGKYECVAEN 184 (212)
T ss_dssp CEEEE---CCCCEEEETTCCEEECCEEECSSCCEEEEEE-TTEECCTTSTTE--EEETTEEEECSCCGGGCEEEEEEEEE
T ss_pred CeeEe---CCCceEeecCCeEEEEEEeccCCCCeEEEEE-CCeEcccCCCeE--EccCCeEEEccCChhhCEEEEEEeec
Confidence 66666 5666788899999999999999999999999 777765432222 23356899999999999999999998
Q ss_pred cC
Q psy15390 89 IG 90 (142)
Q Consensus 89 ~~ 90 (142)
..
T Consensus 185 ~~ 186 (212)
T 2yd1_A 185 SM 186 (212)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 295
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.34 E-value=1e-11 Score=86.59 Aligned_cols=90 Identities=21% Similarity=0.483 Sum_probs=61.4
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC-cceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK-RKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+|.+.. .+....+.+|++++|.|.+ +.|.+.+.|++.++....... ..++....
T Consensus 341 ~P~i~~---~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~--------------------- 395 (440)
T 3zyj_A 341 APVIVE---PPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLS--------------------- 395 (440)
T ss_dssp CCCEEE---CCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECT---------------------
T ss_pred CCcccc---cccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEcc---------------------
Confidence 566666 6777889999999999999 568889999985554432211 01111111
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.+.|.|.+++.+|+|.|+|.|.|..|. .+..+.+.|
T Consensus 396 ------------------~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~~~v 431 (440)
T 3zyj_A 396 ------------------DGTLNFTNVTVQDTGMYTCMVSNSVGN-TTASATLNV 431 (440)
T ss_dssp ------------------TCCEEESSCCSTTCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred ------------------CCeEEEccCChhhCEEEEEEEEcCCCc-EEEEEEEEE
Confidence 234777788888888888888888775 566666665
No 296
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.34 E-value=5.6e-13 Score=71.92 Aligned_cols=60 Identities=17% Similarity=0.378 Sum_probs=45.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeec-CCCCCeEEEEEEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKI-SRTEMGAYLCIAT 87 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v-~~~d~G~y~C~~~ 87 (142)
.++...+..|++++|.|.+.+.|. +.|++ +|..+... .++.|.|.++ ..+|+|.|+|.+.
T Consensus 5 ~p~~~v~~~G~~v~L~C~~~g~P~--i~W~k-dg~~l~~~--------~~~~L~I~~v~~~~DsG~Y~C~A~ 65 (82)
T 3r08_E 5 NIEYKVSISGTSVELTCPLDSDEN--LKWEK-NGQELPQK--------HDKHLVLQDFSEVEDSGYYVCYTP 65 (82)
T ss_dssp CCCCEEEEETTEEEEECSSCCCSS--CEEEE-TTEECTTC--------CSSCCBCCSCCTTTTCSCEEEECS
T ss_pred CCceeEEEcCCeEEEEEECCCCCc--EEEEE-CCEECcCC--------CCCEEEECccCccCcCEEEEEEEc
Confidence 355566778999999999988773 99999 88876432 3456888885 6688888888765
No 297
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.34 E-value=7.9e-13 Score=91.83 Aligned_cols=72 Identities=15% Similarity=0.453 Sum_probs=49.9
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---c------------CCcceEEeec-----cceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---I------------NKRKKVHMHY-----GEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---~------------~~~~~~~~~~-----~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. . ....++.... ...|.|.+
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (434)
T 1igy_B 5 ESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSS 84 (434)
T ss_dssp CCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECS
T ss_pred CCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECC
Confidence 45567889999999999998764 5679999842 22210 0 0112333222 23799999
Q ss_pred cCCCCCeEEEEEEEe
Q psy15390 74 ISRTEMGAYLCIATK 88 (142)
Q Consensus 74 v~~~d~G~y~C~~~~ 88 (142)
++.+|+|.|.|.+.+
T Consensus 85 v~~~D~G~Y~C~~~~ 99 (434)
T 1igy_B 85 LTSDDSAVYYCVREG 99 (434)
T ss_dssp BCGGGCSEECCCCSS
T ss_pred CChHHCEEEEEEEEc
Confidence 999999999999865
No 298
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.33 E-value=4e-12 Score=89.32 Aligned_cols=85 Identities=24% Similarity=0.415 Sum_probs=60.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecC-CcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISIN-KRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIF 95 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~ 95 (142)
.+....+.+|+++.|.|.+.|.|.|.+.|++ ++..+... ...++.
T Consensus 391 ~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~-~~~~~~~~~~~~~~~--------------------------------- 436 (477)
T 2id5_A 391 KAQQVFVDEGHTVQFVCRADGDPPPAILWLS-PRKHLVSAKSNGRLT--------------------------------- 436 (477)
T ss_dssp SCEEEEEETTCCEEECCCEEEESCCEEEEEC-TTSCBC-------CE---------------------------------
T ss_pred ccccEEEeCCCeEEEEEeccccCCCEEEEEE-CCccccccCCCceEE---------------------------------
Confidence 4567789999999999999999999999999 66554221 001100
Q ss_pred EEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 96 WEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 96 w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
....+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 437 ------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 476 (477)
T 2id5_A 437 ------VFPDGTLEVRYAQVQDNGTYLCIAANAGGN-DSMPAHLHVR 476 (477)
T ss_dssp ------ECTTSCEEESSCCSTTCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred ------eCCCCEEEEeeCChHHCEEEEEEEEeCCCc-EEEEEEEEEe
Confidence 111235888888888889999999988886 5777777763
No 299
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.33 E-value=2e-11 Score=75.67 Aligned_cols=85 Identities=25% Similarity=0.415 Sum_probs=62.9
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEec-CCcceecC-CcceEEeecc---ceEEEeecC-CC
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRRE-DNQPISIN-KRKKVHMHYG---EQLNITKIS-RT 77 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~-~~~~~~~~-~~~~~~~~~~---~~l~i~~v~-~~ 77 (142)
.+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++. ++..+... ...++....+ +.|.|.++. ..
T Consensus 88 ~V~~~p~~~~---~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~ 164 (190)
T 2wv3_A 88 EVKAAPDITG---HKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITE 164 (190)
T ss_dssp EEECCCEEEE---ECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTT
T ss_pred EEecCCcccc---cCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccC
Confidence 4556888877 56677899999999999999999999999985 45544321 1222222221 379999999 79
Q ss_pred CCeEEEEEEEecCC
Q psy15390 78 EMGAYLCIATKIGP 91 (142)
Q Consensus 78 d~G~y~C~~~~~~~ 91 (142)
|+|.|.|.+.|...
T Consensus 165 d~G~Y~C~a~N~~g 178 (190)
T 2wv3_A 165 DPGEYECNATNSIG 178 (190)
T ss_dssp SCEEEEEEEECSSC
T ss_pred CCEEEEEEEEecCC
Confidence 99999999998643
No 300
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.33 E-value=4.2e-13 Score=86.66 Aligned_cols=66 Identities=11% Similarity=0.193 Sum_probs=46.3
Q ss_pred EecCCcEEEEEEEecC---CCC-eeEEEecCCcceecCCcc-eEE-----eeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 23 VREEFNITLTCKAEGF---PAP-EIKWRREDNQPISINKRK-KVH-----MHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~---~~~-~~~w~~~~~~~~~~~~~~-~~~-----~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
+.+|++++|.|.+.+. |.+ .+.|++ ++..+...... ... ....+.|.|.+++..|.|.|.|.+.+.
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~ 104 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFI-DDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSG 104 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEE-SSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEE-CCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecc
Confidence 6789999999999876 655 899999 55444321100 000 112246999999999999999998753
No 301
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.31 E-value=8.1e-12 Score=77.10 Aligned_cols=82 Identities=27% Similarity=0.504 Sum_probs=60.6
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
..+|.+..+. ......+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....... ....++.|.|.++...|+|.|+|.
T Consensus 94 ~~~p~~~~~~-~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~-~g~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~ 170 (189)
T 2v5t_A 94 NVPPAISMPQ-KSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEENEKYI-LKGSNTELTVRNIINSDGGPYVCR 170 (189)
T ss_dssp EEEEEEECSC-CEEEEETTSCCCEEEECEEEEESCCEEEEEE-TTEECCCSSSEE-EETTTTEEEECSCCGGGCEEEEEE
T ss_pred cCCCCccccc-ccccccccCCCcEEEEEEEccCCCCeEEEEE-CCEECcCCCcEE-EecCCCEEEEcCCChhhCeeEEEE
Confidence 3455554410 1124567789999999999999999999999 888776544332 223356899999999999999999
Q ss_pred EEecC
Q psy15390 86 ATKIG 90 (142)
Q Consensus 86 ~~~~~ 90 (142)
+.|..
T Consensus 171 a~n~~ 175 (189)
T 2v5t_A 171 ATNKA 175 (189)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99853
No 302
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.31 E-value=2.7e-11 Score=77.52 Aligned_cols=71 Identities=15% Similarity=0.370 Sum_probs=46.6
Q ss_pred CceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Cccee---------------cCCcceEEeecc-----ceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQPIS---------------INKRKKVHMHYG-----EQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~~-----~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+. ....+.||+.. +.... .....|+....+ ..|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (230)
T 3n9g_H 7 SGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSL 86 (230)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 345788999999999998752 34578999732 21110 001123222211 24999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~ 100 (230)
T 3n9g_H 87 RSEDTAVYYCARDW 100 (230)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred ChhhCEEEEEEEcc
Confidence 99999999999864
No 303
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.31 E-value=1.3e-11 Score=76.85 Aligned_cols=76 Identities=32% Similarity=0.506 Sum_probs=59.7
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+... .+ ....++.|.|.++...|+|.|+|.+.
T Consensus 113 ~p~~~~---~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~--~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~ 185 (201)
T 3s97_C 113 PADIVV---QFKDVYALMGQNVTLECFALGNPVPDIRWRK-VLEPMPST--AE-ISTSGAVLKIFNIQLEDEGIYECEAE 185 (201)
T ss_dssp EEEEEE---ECCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTBCCCTT--CE-EETTTTEEEECSCCGGGCEEEEEEEE
T ss_pred CCceEe---cCCceEEecCCcEEEEEEccCCCCCceEEEe-CCCcCCCc--ee-ecCCCCEEEEccCChhhCEEEEEEEE
Confidence 455555 3446778899999999999999999999999 77765432 12 23345689999999999999999999
Q ss_pred ecC
Q psy15390 88 KIG 90 (142)
Q Consensus 88 ~~~ 90 (142)
|..
T Consensus 186 n~~ 188 (201)
T 3s97_C 186 NIR 188 (201)
T ss_dssp ETT
T ss_pred ecC
Confidence 853
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.30 E-value=6.8e-12 Score=87.76 Aligned_cols=89 Identities=21% Similarity=0.451 Sum_probs=59.5
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCC-cceEEeeccceEEEeecCCCCCeEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINK-RKKVHMHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+|.+.. .+....+.+|++++|.|.+. |.|.+.|++.++..+.... ..++....
T Consensus 352 ~P~i~~---~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~--------------------- 405 (452)
T 3zyi_A 352 APFIMD---APRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLN--------------------- 405 (452)
T ss_dssp CCCCSB---CCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECT---------------------
T ss_pred Cccccc---ccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECC---------------------
Confidence 566655 56778899999999999987 8889999995555443221 11111111
Q ss_pred EecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 87 TKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 87 ~~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
++.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 406 ------------------~g~L~i~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~v 441 (452)
T 3zyi_A 406 ------------------DGTLNFSHVLLSDTGVYTCMVTNVAGN-SNASAYLNV 441 (452)
T ss_dssp ------------------TSCEECSSCCTTCCEEEEEEEECSSCE-EEEEEEEEC
T ss_pred ------------------CCeEEEeecCHHHCEEEEEEEEcCCCc-EEEEEEEEE
Confidence 234777777777777777777777775 566666665
No 305
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.30 E-value=3.4e-11 Score=74.02 Aligned_cols=74 Identities=27% Similarity=0.400 Sum_probs=59.6
Q ss_pred cccCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCC-eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEE
Q psy15390 4 YKSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAP-EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 4 ~~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y 82 (142)
.+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++ ++..+.... .....|.|.++ .|+|.|
T Consensus 94 ~V~~~p~~~~---~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~~~~~------~~~~~L~i~~~--~d~G~Y 161 (182)
T 1rhf_A 94 TVEGVPFFTV---EPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWR-GTTKIGGPA------PSPSVLNVTGV--TQSTMF 161 (182)
T ss_dssp EEECSCEEEE---CCCCEEECTTCCEEEEEEEECSSSCCEEEEEE-TTEECSCSE------ESSEEEEECCC--SSCEEE
T ss_pred EEecCCeEEe---cCcceEecCCCEEEEEeEecCCCCCCEEEEEc-CCeECCCCC------CCceEEEEecc--ccCeEE
Confidence 3456788877 6677789999999999999999998 899999 777664321 14567889888 589999
Q ss_pred EEEEEec
Q psy15390 83 LCIATKI 89 (142)
Q Consensus 83 ~C~~~~~ 89 (142)
+|.+.|.
T Consensus 162 ~C~a~N~ 168 (182)
T 1rhf_A 162 SCEAHNL 168 (182)
T ss_dssp EEEEEET
T ss_pred EEEEECC
Confidence 9999986
No 306
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.29 E-value=4.6e-12 Score=71.81 Aligned_cols=73 Identities=15% Similarity=0.184 Sum_probs=46.6
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEE-eeccceEEEeecCCCCCeEEEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVH-MHYGEQLNITKISRTEMGAYLCI 85 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~l~i~~v~~~d~G~y~C~ 85 (142)
.+|.+.. .+.. .+.+|++|+|.|.+.+. ...+.|++ +++.+... +.. ...+..|.|.+++.+|+|.|.|.
T Consensus 4 ~kP~i~~---~p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k-~g~~~~~~---~~~~~~~~~~l~I~~v~~~dsG~Y~C~ 74 (105)
T 2vsd_A 4 PQPSLSL---HPSQ-GVSLGDTVTLRCHLPRM-AAWVQLWL-NGTLRFDK---EKDKEQDAAEFSFAVTNLEDAGTYQCR 74 (105)
T ss_dssp CCCEEEE---ESCS-SCCTTCEEEEEEECCSS-CEEEEEEE-TTEEEEEE---EECTTCSEEEEEEECCSGGGCEEEEEE
T ss_pred CCCEEEe---CCCC-CcCcCCCEEEEEEcCCC-CcEEEEEE-CCccceee---eccCCCCEEEEEECCCCHHHCeEEEEE
Confidence 4567665 4444 57899999999998765 34688999 77654321 000 11123567777777777777776
Q ss_pred EEe
Q psy15390 86 ATK 88 (142)
Q Consensus 86 ~~~ 88 (142)
+.+
T Consensus 75 ~~n 77 (105)
T 2vsd_A 75 YQV 77 (105)
T ss_dssp EEE
T ss_pred EEc
Confidence 665
No 307
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.28 E-value=1.6e-11 Score=77.56 Aligned_cols=78 Identities=26% Similarity=0.515 Sum_probs=60.8
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEE-ecCCCCeeEEEecCCcceecCC------cceEEeeccceEEEeecCCCCCe
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQPISINK------RKKVHMHYGEQLNITKISRTEMG 80 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~~~~~~~~------~~~~~~~~~~~l~i~~v~~~d~G 80 (142)
+|.+.. .+....+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+.... ..+.....++.|.|.++...|+|
T Consensus 108 ~~~~~~---~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 183 (217)
T 2vr9_A 108 RDDFRV---EPKDTRVAKGETALLECGPPKGIPEPTLIWIK-DGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEG 183 (217)
T ss_dssp CCSCSB---CCCCEEECTTSCEEECCBCCCEESCCEEEEEE-TTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCE
T ss_pred CCCcEE---CCCccEEcCCCeEEEEEECCCCCCCCeEEEEE-CCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCe
Confidence 444444 5567778999999999998 888899999999 887775321 22233445668999999999999
Q ss_pred EEEEEEEec
Q psy15390 81 AYLCIATKI 89 (142)
Q Consensus 81 ~y~C~~~~~ 89 (142)
.|+|.+.|.
T Consensus 184 ~Y~C~a~N~ 192 (217)
T 2vr9_A 184 NYKCIAQNL 192 (217)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEEcc
Confidence 999999985
No 308
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.28 E-value=2.6e-11 Score=79.69 Aligned_cols=96 Identities=19% Similarity=0.266 Sum_probs=60.8
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
+|.+.. .+....+.+|+++.|.|.+.+.|.+.+.|++ +++............... ..
T Consensus 181 ~p~i~~---~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~----------~~--------- 237 (289)
T 3mjg_X 181 SINVSV---NAVQTVVRQGENITLMCIVIGNEVVNFEWTY-PRKESGRLVEPVTDFLLD----------MP--------- 237 (289)
T ss_dssp CCCCEE---EESCSEEETTSCEEEEEEEESCSSBEEEEEC-TTSSSSCCCCCEEEESCT----------TT---------
T ss_pred CCCcEE---eCCcceeEcCCCEEEEEEECCCCCcceEEEc-CCccCCCcccccccccCC----------cc---------
Confidence 555554 4445678899999999999999999999998 554332111100000000 00
Q ss_pred ecCCccEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 88 KIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 88 ~~~~~~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
......|.|.+++.+|+|.|+|.|.|..|. .+..+.|+|
T Consensus 238 --------------~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~v 276 (289)
T 3mjg_X 238 --------------YHIRSILHIPSAELEDSGTYTCNVTESVND-HQDEKAINI 276 (289)
T ss_dssp --------------TEEEEEEEESSCCSSCCEEEEEEEEETTTT-EEEEEEEEE
T ss_pred --------------eEEEEEEEEcccChhhCcEEEEEeecCCCC-ceeEEEEEE
Confidence 001235888888888888888888888886 455555554
No 309
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.27 E-value=4.3e-11 Score=68.14 Aligned_cols=100 Identities=14% Similarity=0.290 Sum_probs=58.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-CcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIF 95 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~ 95 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.. +..+ .......+. ......+ .+.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~------~~l~~~~~~-----~~~~~~~------------R~~ 65 (109)
T 2q20_A 9 SPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAP------KLLIYDASN-----LETGVPS------------RFS 65 (109)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCE------EEEEETTTE-----ECTTCCT------------TEE
T ss_pred eCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCC------EEEEEEcCc-----cCCCCCC------------cEE
Confidence 566788999999999999988777789999832 1111 000110000 0000001 111
Q ss_pred EEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEEC
Q psy15390 96 WEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142 (142)
Q Consensus 96 w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V~ 142 (142)
.. .......|.|.+++.+|+|.|.|.+.+...........|.||
T Consensus 66 ~~---~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~ 109 (109)
T 2q20_A 66 GS---GSGTDFTFTISSLQPEDIATYYCQQYDNLPYTFGQGTKLEIK 109 (109)
T ss_dssp EE---EETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred Ee---ccCCEEEEEECCCChhhCEEEEEEEeeCCcceECCCEEEEEC
Confidence 11 122344688888888888999998887643234445566664
No 310
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.26 E-value=1.2e-11 Score=77.56 Aligned_cols=83 Identities=20% Similarity=0.346 Sum_probs=59.1
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEE-EecCCCCeeEEEecCCc-ceecCCc-------ceEEe-eccceEEEeec
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCK-AEGFPAPEIKWRREDNQ-PISINKR-------KKVHM-HYGEQLNITKI 74 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~-~~~~~~~~~~w~~~~~~-~~~~~~~-------~~~~~-~~~~~l~i~~v 74 (142)
+..+|.+.. .+....+.+|+.+.|.|. +.+.|.+.+.|++ ++. .+..... .+... ...+.|.|.++
T Consensus 101 V~~~p~~~~---~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 176 (212)
T 1f97_A 101 VLVPPSKPT---ISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFK-DGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPV 176 (212)
T ss_dssp EEBCCCCCE---EECCSEEETTSCEEEEEECSCCBSCCEEEEEE-TTEESBC-----CBSCSSSCEEECTTTCCEEESSC
T ss_pred EEcCCCCcc---cCCccccCCCCeEEEEEEcccCcCCCEEEEEe-CCcccccccccccccccCceeEecCCCceEEEEec
Confidence 345666544 233456889999999999 7888999999999 777 6654322 11112 23567999999
Q ss_pred CCCCCeEEEEEEEecCC
Q psy15390 75 SRTEMGAYLCIATKIGP 91 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~~~ 91 (142)
+..|+|.|.|.+.|...
T Consensus 177 ~~~d~G~Y~C~a~n~~g 193 (212)
T 1f97_A 177 TAFDSGEYYCQAQNGYG 193 (212)
T ss_dssp CGGGCEEEEEEEECSSS
T ss_pred ChhhCcEEEEEEccccC
Confidence 99999999999998643
No 311
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.26 E-value=2.7e-11 Score=75.32 Aligned_cols=71 Identities=20% Similarity=0.281 Sum_probs=57.2
Q ss_pred ceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee-ccceEEEee-cCCCCCeEEEEEEEecC
Q psy15390 19 SSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH-YGEQLNITK-ISRTEMGAYLCIATKIG 90 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~l~i~~-v~~~d~G~y~C~~~~~~ 90 (142)
....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....+...... ....|.|.+ +...|+|.|+|.+.|..
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~ 184 (197)
T 2j8h_A 112 GAVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRF 184 (197)
T ss_dssp EEEEEETTCCCEEEEEEEEESCCEEEEEE-SSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETT
T ss_pred CeEEEeCCCEEEEEEEEEecCCCcEEEEE-CCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCC
Confidence 45678889999999999999999999999 8887765544433222 335799999 99999999999999853
No 312
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.26 E-value=5.3e-11 Score=68.17 Aligned_cols=31 Identities=23% Similarity=0.523 Sum_probs=25.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+ +.+.|++.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~ 37 (113)
T 1h5b_A 7 SPSALSLHEGTDSALRCNFTTTM-RSVQWFRQ 37 (113)
T ss_dssp ECSEEEEETTCCEEEEEEESSCC-SEEEEEEE
T ss_pred CCCEEEEecCCcEEEEEEECCCC-ceEEEEEE
Confidence 46677899999999999998654 58999983
No 313
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.26 E-value=2.9e-11 Score=76.69 Aligned_cols=69 Identities=20% Similarity=0.393 Sum_probs=58.1
Q ss_pred CeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEe
Q psy15390 9 PNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 9 p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~ 88 (142)
|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+... ....|.|.++...|+|.|+|.+.|
T Consensus 119 p~~~~---~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n 186 (218)
T 3k0w_A 119 LQICV---EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTHE--------TKKLYMVPYVDLEHQGTYWCHVYN 186 (218)
T ss_dssp CEEEE---CCCCEEECTTCCEEEECEEEBSSCCEEEEEE-TTEECTTC--------CSSEEEESSCCGGGCEEEEEEEEC
T ss_pred ceEEE---CCCceeecCCCcEEEEEEecccCCCeEEEEE-CCEECCCC--------CCCEEEEeecChhcCEEEEEEEEc
Confidence 56655 6667789999999999999999999999999 77766432 235799999999999999999998
Q ss_pred c
Q psy15390 89 I 89 (142)
Q Consensus 89 ~ 89 (142)
.
T Consensus 187 ~ 187 (218)
T 3k0w_A 187 D 187 (218)
T ss_dssp S
T ss_pred C
Confidence 4
No 314
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.25 E-value=2e-11 Score=69.81 Aligned_cols=100 Identities=14% Similarity=0.065 Sum_probs=53.0
Q ss_pred ceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEEEEE
Q psy15390 19 SSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIFWEI 98 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~w~~ 98 (142)
.+..+.+|+++.|.|.........+.|++ +...... ........+....+. ..+..|.
T Consensus 8 ~p~~~~~G~~v~L~~~~~p~~~~~i~W~k-g~~~~~~--~~I~~y~~~~~~~~~--~~~~~gR----------------- 65 (111)
T 2qsq_A 8 TPFNVAEGKEVLLLVHNLPQHLFGYSWYK-GERVDGN--RQIIGYVIGTQQATP--GPAYSGR----------------- 65 (111)
T ss_dssp ESSEEETTSCEEEEEESCCSSEEEEEEEE-SSSCCGG--GEEEEEETTTTEEEE--CTTCCSC-----------------
T ss_pred ccceeccCCCEEEEEeCCCCCceEEEEEe-CCCCCCC--cEEEEEECCCcceec--CcccCCc-----------------
Confidence 34578899999999985333334689999 4322110 000011111000110 0111111
Q ss_pred EEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 99 IFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 99 ~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.....+++|.|.+++.+|+|.|+|.+.+..+...+..+.|.|
T Consensus 66 -~~~~~ngSL~I~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~V 107 (111)
T 2qsq_A 66 -EIIYPNASLLIQNIIQNDAGFYTLHVIKSDLVNEEATGQFRV 107 (111)
T ss_dssp -EEECTTSCEEECSCCGGGCEEEEEEEEETTSCCEEEEEEEEE
T ss_pred -EEEecCCcEEEccCcccCCeEEEEEEEeCCCcEEEEEEEEEE
Confidence 111224568888888888888888888775543455666655
No 315
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.25 E-value=3.3e-11 Score=75.63 Aligned_cols=71 Identities=28% Similarity=0.621 Sum_probs=57.7
Q ss_pred CCceeEEecCCcEEEEEEE-ecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecC
Q psy15390 17 TPSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
.+....+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+....... ...++.|.|.+++..|+|.|.|.+.|..
T Consensus 117 ~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~l~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~N~~ 188 (212)
T 2v9r_A 117 NPSDVMVAVGEPAVMECQPPRGHPEPTISWKK-DGSPLDDKDERI--TIRGGKLMITYTRKSDAGKYVCVGTNMV 188 (212)
T ss_dssp CCCCEEEETTSCEEEECBCCCEESCCEEEEEE-TTEEECTTSTTE--EEETTEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCceEecCCCcEEEEEecCCCCCCCEEEEEE-CCccCCCCcceE--EccCCeEEEeeCCHhhCeeEEEEEeccc
Confidence 4566788899999999998 888889999999 888776543222 2345689999999999999999999853
No 316
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.25 E-value=5.7e-11 Score=68.77 Aligned_cols=32 Identities=31% Similarity=0.492 Sum_probs=27.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.
T Consensus 9 ~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~ 40 (119)
T 2e27_L 9 SPSSLSASLGGKVTITCKANQDIKKKIAWYQH 40 (119)
T ss_dssp ECSEEEEETTCCEEEEEEESSCCTTCEEEEEE
T ss_pred cCCeEEEeCCCCEEEEEEeCCCCCceEEEEEE
Confidence 56678899999999999998877778999983
No 317
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.25 E-value=2.7e-11 Score=76.98 Aligned_cols=125 Identities=14% Similarity=0.153 Sum_probs=73.9
Q ss_pred CCCeeeecCCCCceeE--EecCCcEEEEEEEecC---CC-CeeEEEecCCcceecCCcceEE------eeccceEEEeec
Q psy15390 7 VPPNILDTESTPSSVA--VREEFNITLTCKAEGF---PA-PEIKWRREDNQPISINKRKKVH------MHYGEQLNITKI 74 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~--~~~g~~v~l~C~~~~~---~~-~~~~w~~~~~~~~~~~~~~~~~------~~~~~~l~i~~v 74 (142)
.+|.+.. .+.... +.+|++++|.|.+.+. |. +.+.|++ ++..+......... ....+.|.|.++
T Consensus 8 ~~p~v~~---~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~ 83 (218)
T 2rgs_A 8 GGPSVFI---FPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFV-NNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQ 83 (218)
T ss_dssp -CCEEEE---ECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEE-TTEEECCCEEEEEEETTTTEEEEEEEEECCHH
T ss_pred CCCEEEE---ECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEE-CCccccCcccccccccCCCeEEEEEEEEEcHH
Confidence 4566654 333333 6789999999999876 33 6899999 76655322110000 112346999999
Q ss_pred CCCCCeEEEEEEEecCCccEEEEEEEe----ccccceEEEccC----CCCCCeEEEEEEec-CCCC-CeeeE
Q psy15390 75 SRTEMGAYLCIATKIGPLKIFWEIIFH----MHYGEQLNITKI----SRTEMGAYLCIATN-NVPP-SVSKR 136 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~~~~~~~w~~~~~----~~~~~~l~i~~~----~~~d~g~y~C~a~n-~~~~-~~s~~ 136 (142)
+..|+|.|+|.+.+..... .....+. ....-.+.+... ..++...+.|.|.+ .+.+ .+.|.
T Consensus 84 ~~~D~g~Y~C~~~~~~~~~-~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 154 (218)
T 2rgs_A 84 DWMSGKEFKCKVNNKDLPS-PIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWT 154 (218)
T ss_dssp HHHTTCCEEEEEEETTCSS-CEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred HcCCCCeEEEEEECCcCCC-cceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEE
Confidence 9999999999999875432 0111111 111122332221 12566799999997 3443 56664
No 318
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.25 E-value=1.2e-11 Score=77.24 Aligned_cols=67 Identities=9% Similarity=0.056 Sum_probs=41.8
Q ss_pred eEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee---ccceEEEeecCCCCCeEEEEEEEec
Q psy15390 21 VAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH---YGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
..+.+|++++|.|.+.+.| +.+.|++ ++..+........... ....|.|.+++.+|+|.|.|.+.|.
T Consensus 109 ~~v~~G~~v~L~C~~~~~p-~~~~W~k-~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 178 (196)
T 2d3v_A 109 PVVTSGENVTLQCGSRLRF-DRFILTE-EGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRR 178 (196)
T ss_dssp --------CEEEEEESSCC-SEEEEEE-C---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEET
T ss_pred ccccCCCcEEEEEEcCCCC-CEEEEEc-cCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEcc
Confidence 4678899999999999888 7999999 7776532211100111 1257999999999999999999875
No 319
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.25 E-value=2.9e-10 Score=63.66 Aligned_cols=37 Identities=11% Similarity=0.240 Sum_probs=29.6
Q ss_pred CCceeEEecCCcEEEEEEEec-CCCCeeEEEecCCcce
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQPI 53 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~~ 53 (142)
......+..|+.+.|.|.+.+ .+.|.++|.+.+++..
T Consensus 20 R~S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c 57 (122)
T 1xau_A 20 RNSKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIW 57 (122)
T ss_dssp TTEEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSE
T ss_pred eeccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeec
Confidence 344567889999999999966 5788999999766543
No 320
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.25 E-value=2.5e-10 Score=74.24 Aligned_cols=114 Identities=16% Similarity=0.248 Sum_probs=80.0
Q ss_pred CCceeEEecCCcEEEEEEEec-CC---CCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecC--
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-FP---APEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIG-- 90 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-~~---~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~-- 90 (142)
.|+...+..|+.++|.|.+.+ .| ...+.|++ ++..+.. ....|.+..+...|+|.|+|.+.+..
T Consensus 8 ~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyK-DG~~IsG---------aT~tLti~s~t~sdSG~YqCvVTDa~Gc 77 (304)
T 3shs_A 8 QSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTK-DDQPHEN---------NTATLTVADATSENAGSYKVTVQDTDTM 77 (304)
T ss_dssp EESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEE-TTEECSC---------CSSEEEESSCCGGGCEEEEEEEEETTTC
T ss_pred CCCCccccCCCCEEEEEEecCCCCCCCCceEEEEE-CCccccC---------CcceEEeeeccccCCeEEEEEEEECCCC
Confidence 566667889999999999865 44 34799999 8765421 23468888999999999999987530
Q ss_pred ---------------------------------------------------CccEEEEEEE-eccccceEEEccCCCCCC
Q psy15390 91 ---------------------------------------------------PLKIFWEIIF-HMHYGEQLNITKISRTEM 118 (142)
Q Consensus 91 ---------------------------------------------------~~~~~w~~~~-~~~~~~~l~i~~~~~~d~ 118 (142)
...++|.+.. .+.....|.+...+..++
T Consensus 78 s~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq~lT~sS~Tatea 157 (304)
T 3shs_A 78 TSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQDITIQEFTADKN 157 (304)
T ss_dssp CEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSSEEEECSCCGGGC
T ss_pred eeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCccccceeeEEecCC
Confidence 1245565532 222334567777788999
Q ss_pred eEEEEEEecCCC-CCeeeEEEEE
Q psy15390 119 GAYLCIATNNVP-PSVSKRITVD 140 (142)
Q Consensus 119 g~y~C~a~n~~~-~~~s~~~~l~ 140 (142)
|.|+|++.|..+ ...+..+.+.
T Consensus 158 G~YtV~VTn~~~~c~~s~~~~i~ 180 (304)
T 3shs_A 158 GVYTVKVWGESEDSAASASTKIM 180 (304)
T ss_dssp EEEEEEEESSSGGGCEEEEEEEE
T ss_pred eEEEEEEEcCCCCcccccceEEE
Confidence 999999998865 3445555443
No 321
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.25 E-value=3.1e-11 Score=77.77 Aligned_cols=70 Identities=16% Similarity=0.334 Sum_probs=46.9
Q ss_pred CceeEEecCCcEEEEEEEecCC----CCeeEEEecC-Ccc---e---e------c--------CCcceEEeec-----cc
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP----APEIKWRRED-NQP---I---S------I--------NKRKKVHMHY-----GE 67 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~----~~~~~w~~~~-~~~---~---~------~--------~~~~~~~~~~-----~~ 67 (142)
+..+.+.+|++++|.|.+.+.+ ...+.||+.. +.. + . . ....|+.... ..
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 4456789999999999998755 3479999832 211 1 0 0 0112222221 12
Q ss_pred eEEEeecCCCCCeEEEEEEE
Q psy15390 68 QLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 68 ~l~i~~v~~~d~G~y~C~~~ 87 (142)
.|.|.+++.+|+|.|.|.+.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~ 106 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARF 106 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEe
Confidence 59999999999999999875
No 322
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.24 E-value=2.2e-11 Score=78.33 Aligned_cols=72 Identities=19% Similarity=0.269 Sum_probs=54.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCc----------------------ceEEeeccceEEEeec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKR----------------------KKVHMHYGEQLNITKI 74 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~----------------------~~~~~~~~~~l~i~~v 74 (142)
.+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+..... .+........|.|.++
T Consensus 142 ~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 220 (250)
T 2fbo_J 142 TAEVVQVDEGNDITMTCPCTDCANANVTWYT-GPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAA 220 (250)
T ss_dssp CCSEEECCTTCCEEECCCEESCTTCEEEEEE-EEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSC
T ss_pred cCceEEecCCCcEEEEEEecCCCCCeeEEEe-CCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecC
Confidence 4456777889999999999998888999999 7665543210 1111223468999999
Q ss_pred CCCCCeEEEEEEEec
Q psy15390 75 SRTEMGAYLCIATKI 89 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~ 89 (142)
+.+|+|.|+|.+.|.
T Consensus 221 ~~~D~G~Y~C~a~N~ 235 (250)
T 2fbo_J 221 KITDAGRVWCELATG 235 (250)
T ss_dssp CGGGCEEEEEEEESS
T ss_pred CcccCEEEEEEecCC
Confidence 999999999999984
No 323
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.24 E-value=7.5e-11 Score=67.38 Aligned_cols=32 Identities=19% Similarity=0.441 Sum_probs=26.8
Q ss_pred CCceeEEecCCcEEEEEEEecC--CCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF--PAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+. +.+.+.||+.
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (111)
T 2ywz_A 6 TPRTITKETGESLTIKCVLKDHSCGLSSTTWYRT 39 (111)
T ss_dssp ECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEE
T ss_pred CCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEe
Confidence 5677889999999999999875 4668999983
No 324
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.24 E-value=4.2e-10 Score=71.71 Aligned_cols=118 Identities=16% Similarity=0.232 Sum_probs=70.4
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. +..+. .....++.... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4456789999999999998765 5689999842 22211 01112332221 247999999
Q ss_pred CCCCCeEEEEEEEecCC-----ccEEE----EEEEecc--ccceEEE-c---cCCCCCCeEEEEEEecC-CCC-Ceee
Q psy15390 75 SRTEMGAYLCIATKIGP-----LKIFW----EIIFHMH--YGEQLNI-T---KISRTEMGAYLCIATNN-VPP-SVSK 135 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~~~-----~~~~w----~~~~~~~--~~~~l~i-~---~~~~~d~g~y~C~a~n~-~~~-~~s~ 135 (142)
+.+|+|.|.|.+.+... ....+ ...+... ..-.+.+ . .+..++..++.|.+.+. +.+ .+.|
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 164 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 164 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEEC
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEE
Confidence 99999999999988642 11122 1122211 1111222 1 13345566999999875 443 4555
No 325
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.23 E-value=3.9e-11 Score=74.94 Aligned_cols=69 Identities=13% Similarity=0.085 Sum_probs=47.7
Q ss_pred eEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee---ccceEEEeecCCCCCeEEEEEEEecCC
Q psy15390 21 VAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH---YGEQLNITKISRTEMGAYLCIATKIGP 91 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~v~~~d~G~y~C~~~~~~~ 91 (142)
..+.+|++++|.|.+.+. .+.+.|++ ++..+........... ....|.|.+++.+|+|.|.|.+.|...
T Consensus 110 ~~v~~G~~v~L~C~~~~~-~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 110 PVVNSGGNVTLQCDSQVA-FDGFILCK-EGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp SEEETTCCEEEEEECSSC-CSEEEEEE-C------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred cccCCCCcEEEEEecCCC-CcEEEEEE-CCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 567899999999999887 67999999 7776532211110111 135799999999999999999998643
No 326
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.23 E-value=3.8e-11 Score=68.34 Aligned_cols=71 Identities=18% Similarity=0.295 Sum_probs=45.8
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCC-----eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAP-----EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGA 81 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-----~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 81 (142)
.+|.+.. .+.. .+.+|++|+|.|.+...+.. .+.|++ +|..+.. ......|.|.+++..|+|.
T Consensus 7 ~kP~l~~---~p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k-~g~~l~~-------~~~~~~l~i~~v~~~dsG~ 74 (108)
T 4hwn_A 7 PAPILRA---VPSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYK-DGRIVQS-------RGLSSEFQIPTASEDHSGS 74 (108)
T ss_dssp CCCEEEE---ESCS-SCBTTCCEEEEEEC---------CCEEEEEE-TTEEEEE-------EESCCEEEESSCCGGGCEE
T ss_pred CCCEEEe---cCCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEE-CCcCccC-------CCcccEEEeCccCcccCeE
Confidence 4566655 3433 46789999999998765443 389999 8876531 2234567777788888888
Q ss_pred EEEEEEec
Q psy15390 82 YLCIATKI 89 (142)
Q Consensus 82 y~C~~~~~ 89 (142)
|.|.+.+.
T Consensus 75 Y~C~~~~~ 82 (108)
T 4hwn_A 75 YWCEAATE 82 (108)
T ss_dssp EEEEEECT
T ss_pred EEEEEEeC
Confidence 88877653
No 327
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.23 E-value=6.5e-11 Score=74.55 Aligned_cols=73 Identities=18% Similarity=0.281 Sum_probs=55.5
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEEecC-CCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGF-PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
+..+|.+.. .+ ...+.+|+++.|.|.+.+. |.+.+.|++ ++..+.. ...++.|.|.+++..|+|.|+
T Consensus 86 V~~~p~~~~---~~-~~~v~~G~~v~L~C~~~~~~p~~~v~W~k-~g~~~~~-------~~~~~~L~i~~v~~~D~G~Y~ 153 (204)
T 3sgj_C 86 VHIGWLLLQ---AP-RWVFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKGRKY-------FHHNSDFYIPKATLKDSGSYF 153 (204)
T ss_dssp EECSSEEEE---CS-CSEEETTCCEEEEEEEGGGCCCEEEEEEE-TTEEEEE-------EEECCCEEESSCCGGGCEEEE
T ss_pred EecCceEec---CC-ceeEeCCCcEEEEEEecCCCCCceEEEEE-CCcEeec-------ccCCceEEECcCCcccCEEEE
Confidence 334555544 23 3678899999999999654 557899999 8876532 234568999999999999999
Q ss_pred EEEEec
Q psy15390 84 CIATKI 89 (142)
Q Consensus 84 C~~~~~ 89 (142)
|.+.|.
T Consensus 154 C~a~n~ 159 (204)
T 3sgj_C 154 CRGLVG 159 (204)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 999984
No 328
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.23 E-value=3.1e-11 Score=78.26 Aligned_cols=72 Identities=17% Similarity=0.401 Sum_probs=47.9
Q ss_pred CCceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEee
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITK 73 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~ 73 (142)
.+..+.+.+|++++|.|.+.+. +...+.||+.. +..+. .....|+.... ..+|.|.+
T Consensus 5 ~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 84 (248)
T 3u2s_H 5 ESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNS 84 (248)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred cCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECC
Confidence 3556788999999999999752 34579999732 22110 01112322221 12599999
Q ss_pred cCCCCCeEEEEEEEe
Q psy15390 74 ISRTEMGAYLCIATK 88 (142)
Q Consensus 74 v~~~d~G~y~C~~~~ 88 (142)
++.+|+|.|.|.+.+
T Consensus 85 v~~~DsG~Y~C~~~~ 99 (248)
T 3u2s_H 85 LRVEDTATYFCVREA 99 (248)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CCHHHCEEEEEEEeC
Confidence 999999999998864
No 329
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.22 E-value=8.5e-11 Score=68.11 Aligned_cols=32 Identities=25% Similarity=0.446 Sum_probs=27.7
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.||+.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~ 38 (120)
T 1mqk_L 7 TPVSLSASVGETVTITCRASENIYSYLAWYQQ 38 (120)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred cCCeEEEcCCCcEEEEEEeCCCCCceEEEEEE
Confidence 46678899999999999998877778999984
No 330
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.22 E-value=7.2e-11 Score=75.43 Aligned_cols=70 Identities=20% Similarity=0.395 Sum_probs=45.8
Q ss_pred CceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Ccc---ee------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQP---IS------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~---~~------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+. +...+.||+.. +.. +. .....|+.... ...|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (226)
T 3mlr_H 7 SGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTL 86 (226)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSC
T ss_pred CCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCC
Confidence 335788999999999998753 24579999832 211 10 00112222211 124999999
Q ss_pred CCCCCeEEEEEEE
Q psy15390 75 SRTEMGAYLCIAT 87 (142)
Q Consensus 75 ~~~d~G~y~C~~~ 87 (142)
+.+|+|.|.|.+.
T Consensus 87 ~~~DsG~Y~C~~~ 99 (226)
T 3mlr_H 87 QASDTGKYFCTRL 99 (226)
T ss_dssp CGGGCEEEEEEEE
T ss_pred CcccCEEEEEeEc
Confidence 9999999999874
No 331
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.22 E-value=1e-10 Score=82.13 Aligned_cols=66 Identities=14% Similarity=0.134 Sum_probs=44.5
Q ss_pred EEecCCcEEEEEEEecCCC---CeeEEEecCCcceecCCcceEE-----eeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 22 AVREEFNITLTCKAEGFPA---PEIKWRREDNQPISINKRKKVH-----MHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
.+.+|+++.|.|.+.+.++ +.+.| . ++............ ....+.|.|.+++..|.|.|+|.+.|.
T Consensus 258 ~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~ 331 (475)
T 1iga_A 258 DLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYP 331 (475)
T ss_pred HhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcC
Confidence 3578999999999987643 58999 5 44332211100000 112346999999999999999998864
No 332
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.22 E-value=4.2e-11 Score=76.24 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=55.9
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
+|.+.. .+ ...+.+|++++|.|...+.+.+.+.|++ +|..+... ......++.|.|.+++.+|+|.|+|.+.
T Consensus 106 ~P~i~~---~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k-~g~~~~~~---~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 177 (218)
T 1uct_A 106 KPFLSA---DR-GLVLMPGENISLTCSSAHIPFDRFSLAK-EGELSLPQ---HQSGEHPANFSLGPVDLNVSGIYRCYGW 177 (218)
T ss_dssp CCEEEE---SS-CSEECTTCCCEEEEECSSSCCSEEEEEE-TTCSSCCS---EEECSSSEEEECCSCCGGGCEEEEEEEE
T ss_pred CCEEEe---CC-CCccCCCCCEEEEEeCCCCCCCEEEEEE-CCCccccc---ccCCCccCEEEEccCCcccCEEEEEEEE
Confidence 455544 33 3467899999999977677778899999 77766431 1122345689999999999999999998
Q ss_pred ecC
Q psy15390 88 KIG 90 (142)
Q Consensus 88 ~~~ 90 (142)
+..
T Consensus 178 n~~ 180 (218)
T 1uct_A 178 YNR 180 (218)
T ss_dssp CTT
T ss_pred cCC
Confidence 753
No 333
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.22 E-value=8.6e-11 Score=66.64 Aligned_cols=32 Identities=19% Similarity=0.476 Sum_probs=27.5
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.
T Consensus 7 ~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~ 38 (107)
T 1i8k_A 7 SPASLSVATGEKVTIRCMTSTDIDDDMNWYQQ 38 (107)
T ss_dssp ECSEEECCTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCCeEEecCCCCEEEEEEECCCCCCcEEEEEE
Confidence 46678899999999999998877778999983
No 334
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.22 E-value=1.2e-10 Score=75.68 Aligned_cols=70 Identities=17% Similarity=0.392 Sum_probs=45.9
Q ss_pred ceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeecc-----ceEEEeecC
Q psy15390 19 SSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHYG-----EQLNITKIS 75 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~~-----~~l~i~~v~ 75 (142)
..+.+.+|++++|.|...+.. ...+.|++.. +.... .....|+....+ .+|.|.+++
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (256)
T 3sob_H 31 GGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLR 110 (256)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCC
Confidence 346788999999999987532 4578999732 21110 011122222211 249999999
Q ss_pred CCCCeEEEEEEEe
Q psy15390 76 RTEMGAYLCIATK 88 (142)
Q Consensus 76 ~~d~G~y~C~~~~ 88 (142)
.+|+|.|.|.+.+
T Consensus 111 ~~DsG~Y~C~~~~ 123 (256)
T 3sob_H 111 AEDTAVYYCARGS 123 (256)
T ss_dssp GGGCEEEEEEEES
T ss_pred cccCEEEEEEEec
Confidence 9999999998864
No 335
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.21 E-value=6.4e-11 Score=73.42 Aligned_cols=73 Identities=14% Similarity=0.181 Sum_probs=56.9
Q ss_pred CceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCC-CCCeEEEEEEEecCC
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISR-TEMGAYLCIATKIGP 91 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~-~d~G~y~C~~~~~~~ 91 (142)
+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+............ ...|.|.++.. +|+|.|+|.+.|...
T Consensus 110 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g 184 (197)
T 3lcy_A 110 KEKYYGAVGSTLRLHVMYIGRPVPAMTWFH-GQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFG 184 (197)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSC
T ss_pred CcceeecCCCeEEEEEEEeeeeCCeeEEeE-CCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcC
Confidence 455678899999999999999999999999 88877655443322221 25799999995 899999999998633
No 336
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.21 E-value=3.3e-11 Score=77.12 Aligned_cols=70 Identities=20% Similarity=0.478 Sum_probs=45.4
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCee--EEEecC-Cccee-----------------cCCcceEEeec-----cceEE
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEI--KWRRED-NQPIS-----------------INKRKKVHMHY-----GEQLN 70 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~--~w~~~~-~~~~~-----------------~~~~~~~~~~~-----~~~l~ 70 (142)
+..+.+.+|++++|.|.+.+.+ ...+ .||+.. +.... .....|+.... ...|.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 86 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLT 86 (232)
T ss_dssp ECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEE
Confidence 3456788999999999997632 2445 999732 11110 00112222221 12599
Q ss_pred EeecCCCCCeEEEEEEE
Q psy15390 71 ITKISRTEMGAYLCIAT 87 (142)
Q Consensus 71 i~~v~~~d~G~y~C~~~ 87 (142)
|.+++.+|+|.|.|.+.
T Consensus 87 I~~v~~~DsG~Y~C~~~ 103 (232)
T 3qhz_H 87 MTNMDPVDTATYYCART 103 (232)
T ss_dssp ECSCCGGGCEEEEEEEE
T ss_pred ECcCChhhCEEEEEEEe
Confidence 99999999999999987
No 337
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.20 E-value=3.7e-11 Score=70.14 Aligned_cols=36 Identities=14% Similarity=0.313 Sum_probs=29.8
Q ss_pred cceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 105 GEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 105 ~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
..+|.|.+++.+|+|.|+|.+.|..+. .+..+.|.|
T Consensus 83 ~~sL~I~~v~~~D~G~Y~C~v~~~~g~-~~~~v~LkV 118 (125)
T 4gos_A 83 NASLRLKNVQLTDAGTYKCYIITSKGK-GNANLEYKT 118 (125)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred eEEEEECCCChHHCEEEEEEEEeCCCe-EEEEEEEEE
Confidence 346999999999999999999988775 577777776
No 338
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.20 E-value=1.3e-11 Score=86.20 Aligned_cols=65 Identities=14% Similarity=0.270 Sum_probs=42.4
Q ss_pred EecCCcEEEEEEEecCCCC----eeEEEecCCcceecCCcceEEeeccceEEEee---cCCCC---CeEEEEEEEe
Q psy15390 23 VREEFNITLTCKAEGFPAP----EIKWRREDNQPISINKRKKVHMHYGEQLNITK---ISRTE---MGAYLCIATK 88 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~~~~----~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~---v~~~d---~G~y~C~~~~ 88 (142)
+.+|+++.|.|.+.+.+++ .+.|++ ++..+............++.+.+.. +...| .|.|+|.+.|
T Consensus 261 ~~~G~~v~L~C~~~g~~p~p~~~~i~W~k-~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n 335 (457)
T 1hzh_H 261 LMISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSN 335 (457)
T ss_dssp HCTTSCCCEEEEEECCCTTCCCCEEEEEE-TTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEEC
T ss_pred cccCCceEEEEEEEcccCCCCceEEEEEe-CCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeC
Confidence 5679999999999987543 899999 8776643221111222334444443 33555 8999999885
No 339
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.19 E-value=1e-10 Score=73.22 Aligned_cols=65 Identities=26% Similarity=0.461 Sum_probs=52.6
Q ss_pred EecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecC
Q psy15390 23 VREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
+.+|+.+.|.|.+.+.| +.+.|++ ++..+....+.. ....++.|.|.++...|+|.|+|.+.|..
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~-~g~~l~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 186 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLF-NSQSLQLTERMT-LSQNNSILRIDPIKREDAGEYQCEISNPV 186 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEE-TTEECCCCSSEE-EETTTTEEEESSCCGGGCEEEEEEEECTT
T ss_pred EeeCCCEEEEEECCCCC-CceEEEE-CCEeCCCCCCeE-EcCCCCEEEEeccCHHhCeEEEEEEecCC
Confidence 77899999999998866 7999999 888776544332 22334789999999999999999999853
No 340
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.19 E-value=1.7e-11 Score=76.76 Aligned_cols=82 Identities=22% Similarity=0.341 Sum_probs=60.4
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEE-ecCCCCeeEEEecCCcceecCCcc-------eEEe-eccceEEEeecC
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQPISINKRK-------KVHM-HYGEQLNITKIS 75 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~~~~~~~~~~-------~~~~-~~~~~l~i~~v~ 75 (142)
+..+|.+.. ......+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+...... +... ...+.|.|.++.
T Consensus 104 V~~~p~~~~---~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 179 (209)
T 1nbq_A 104 VLVPPSKPT---VNIPSSATIGNRAVLTCSEQDGSPPSEYTWFK-DGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLS 179 (209)
T ss_dssp EEBCCCCCC---CCCBSEEETTSCEEECCCCCSCBSCCEEEEEE-TTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCC
T ss_pred EecCCcCCC---cccccceecCCEEEEEEeCCCCCCCceeEEEE-CCeeCCCccccceeeeccceEEcCCcceEEEEecc
Confidence 445666554 3445568899999999996 888889999999 77776543321 1111 134679999999
Q ss_pred CCCCeEEEEEEEecC
Q psy15390 76 RTEMGAYLCIATKIG 90 (142)
Q Consensus 76 ~~d~G~y~C~~~~~~ 90 (142)
..|+|.|+|.+.|..
T Consensus 180 ~~d~G~Y~C~a~n~~ 194 (209)
T 1nbq_A 180 ASDTGEYSCEARNGY 194 (209)
T ss_dssp GGGCCCEEEEEECSS
T ss_pred ccCCeEEEEEEeCCc
Confidence 999999999999863
No 341
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.19 E-value=1.9e-11 Score=76.70 Aligned_cols=81 Identities=14% Similarity=0.172 Sum_probs=55.8
Q ss_pred ccCCCeeeecCCCCceeEEecCCcEEEEEEE-ecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEE
Q psy15390 5 KSVPPNILDTESTPSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 5 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 83 (142)
|..+|.+.. ......+.+|+.+.|.|.+ .+.|.+.+.|++ ++.......... ....++.|.|.+++.+|+|.|+
T Consensus 118 V~~~p~~~~---~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~-~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~ 192 (214)
T 3jz7_A 118 VLVKPSGTR---CFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQK-LSDSQTMPTPWL-AEMTSPVISVKNASSEYSGTYS 192 (214)
T ss_dssp EECCCBSCE---EEEESCCBTTCCEEEEEECSBCCSSCEEEEEE-CSTTCCCCGGGG-GGTTSSEEEECSCCGGGCEEEE
T ss_pred EEcCCCCce---eeeecceecCCcEEEEecCCCCCCCCEEEEEE-CCCCCccCccce-eccCCCEEEEecCCHHHCEEEE
Confidence 444555443 2233347789999999999 788899999999 433222111111 1223458999999999999999
Q ss_pred EEEEecC
Q psy15390 84 CIATKIG 90 (142)
Q Consensus 84 C~~~~~~ 90 (142)
|.+.|..
T Consensus 193 C~a~N~~ 199 (214)
T 3jz7_A 193 CTVQNRV 199 (214)
T ss_dssp EEEECSS
T ss_pred EEEEcCC
Confidence 9999864
No 342
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.19 E-value=4.4e-10 Score=71.14 Aligned_cols=118 Identities=13% Similarity=0.238 Sum_probs=69.8
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee--------------cCCcceEEeec-----cceEEEeecC
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS--------------INKRKKVHMHY-----GEQLNITKIS 75 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~--------------~~~~~~~~~~~-----~~~l~i~~v~ 75 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. .....++.... ...|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4456789999999999998754 4689999842 22110 01122333221 2379999999
Q ss_pred CCCCeEEEEEEEecCCc--cE--EEEEEEecc--ccceEEE-c---cCCCCCCeEEEEEEecC-CCC-Ceee
Q psy15390 76 RTEMGAYLCIATKIGPL--KI--FWEIIFHMH--YGEQLNI-T---KISRTEMGAYLCIATNN-VPP-SVSK 135 (142)
Q Consensus 76 ~~d~G~y~C~~~~~~~~--~~--~w~~~~~~~--~~~~l~i-~---~~~~~d~g~y~C~a~n~-~~~-~~s~ 135 (142)
.+|+|.|.|.+.+.... .+ .-...+... ..-.+.+ . .+..++..+++|.|.+. +.+ .+.|
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 158 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTW 158 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEE
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEE
Confidence 99999999999876311 00 011122111 1111221 1 23456677999999976 544 5555
No 343
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.19 E-value=5.1e-10 Score=71.43 Aligned_cols=118 Identities=12% Similarity=0.279 Sum_probs=69.6
Q ss_pred CceeEEecCCcEEEEEEEecCCC----CeeEEEecC-Cccee---c-----------CCcceEEeec-----cceEEEee
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPA----PEIKWRRED-NQPIS---I-----------NKRKKVHMHY-----GEQLNITK 73 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~----~~~~w~~~~-~~~~~---~-----------~~~~~~~~~~-----~~~l~i~~ 73 (142)
+..+.+.+|++++|.|.+.+.+. +.+.|++.+ +..+. . ....++.... ...|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 44567899999999999988764 789999842 22210 0 0122332221 25799999
Q ss_pred cCCCCCeEEEEEEEecCC-----ccE-EE----EEEEecc--ccceEEE-c---cCCCCCCeEEEEEEecC-CCC-Ceee
Q psy15390 74 ISRTEMGAYLCIATKIGP-----LKI-FW----EIIFHMH--YGEQLNI-T---KISRTEMGAYLCIATNN-VPP-SVSK 135 (142)
Q Consensus 74 v~~~d~G~y~C~~~~~~~-----~~~-~w----~~~~~~~--~~~~l~i-~---~~~~~d~g~y~C~a~n~-~~~-~~s~ 135 (142)
++.+|+|.|.|.+.+... ... .+ ...+... ..-.+.+ . .+..++..+++|.|.+. +.+ .++|
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W 166 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 166 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEE
Confidence 999999999999987642 111 12 1111111 1111211 1 12345667999999875 444 4555
No 344
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.18 E-value=1.5e-10 Score=65.79 Aligned_cols=32 Identities=25% Similarity=0.499 Sum_probs=27.2
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~ 38 (108)
T 1qfw_M 7 SPKSMSMSVGERVTLSCKASETVDSFVSWYQQ 38 (108)
T ss_dssp ECSCEECCTTCCEEEEEEESSCCCSCEEEEEE
T ss_pred eCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEE
Confidence 46677899999999999998777678999983
No 345
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.18 E-value=2e-10 Score=70.44 Aligned_cols=63 Identities=19% Similarity=0.318 Sum_probs=51.5
Q ss_pred ceeEEecCCcEEEEEEEecCCCC-eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 19 SSVAVREEFNITLTCKAEGFPAP-EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
....+.+|+.+.|.|.+.+.+.+ .+.|++ ++..+.. ...+..|.|.+++.+|+|.|+|.+.|.
T Consensus 96 ~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k-~g~~~~~-------~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 159 (175)
T 1fnl_A 96 PRWVFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKDRKY-------FHHNSDFHIPKATLKDSGSYFCRGLVG 159 (175)
T ss_dssp SCSEEETTCCEEEEEEECTTCCCEEEEEEE-TTEEEEE-------EEECCCEEESSCCGGGCEEEEEEEEET
T ss_pred CCceecCCCCEEEEEEcCCCCCceEEEEEE-CCeEccC-------CCCCCEEEEcccChhhCeEEEEEEEcC
Confidence 33568899999999999876654 899999 8876632 234568999999999999999999984
No 346
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.18 E-value=2.8e-10 Score=64.77 Aligned_cols=34 Identities=21% Similarity=0.252 Sum_probs=26.6
Q ss_pred CCceeEEecCCcEEEEEEE-ecCCCCeeEEEecCC
Q psy15390 17 TPSSVAVREEFNITLTCKA-EGFPAPEIKWRREDN 50 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~ 50 (142)
....+.+.+|++++|.|.. .+.+.+.+.|++..+
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~ 43 (110)
T 2ptt_A 9 SIPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKN 43 (110)
T ss_dssp CCCSEEEETTSCEEECSCSSCCCSCSEEEEEESTT
T ss_pred CCCCEEEecCCcEEEeCCccCCCCcCEEEEEecCC
Confidence 4456789999999999998 555667899999333
No 347
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.18 E-value=1.4e-10 Score=67.47 Aligned_cols=106 Identities=16% Similarity=0.179 Sum_probs=56.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCCC---eeEEEecCCcceecCCcceEEe-eccceEEEeecCCCCCeEEEEEEEecCCc
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAP---EIKWRREDNQPISINKRKKVHM-HYGEQLNITKISRTEMGAYLCIATKIGPL 92 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~---~~~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~v~~~d~G~y~C~~~~~~~~ 92 (142)
.+..+.+.+|++++|+|...+.+.. .+.|++. ...... ..+.. ..... ......|. -
T Consensus 6 ~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~-~~~~~~---~~~~~~~~~~~-------~~~~~~~~--------~ 66 (123)
T 4gjt_B 6 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARV-DAGEGA---QELALLHSKYG-------LHVSPAYE--------G 66 (123)
T ss_dssp CCSEEECCTTSEEEECCEECCCTTCCEEEEEEEEC-CCSSCC---CEEEEECSSSC-------CCBCGGGT--------T
T ss_pred cCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEc-CCCCCc---ceeEEEEecCC-------cEeCccce--------e
Confidence 4667788999999999998765433 4789983 211100 00000 00000 00000000 0
Q ss_pred cEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 93 KIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 93 ~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
.+.+..........+|.|.+++.+|+|.|+|.+.+.+....+..+.|.|
T Consensus 67 R~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~V 115 (123)
T 4gjt_B 67 RVEQPPPPRNPLDGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRV 115 (123)
T ss_dssp TEECCCSSCCTTBCCEEEESCCSSSCSEEEEEEEESSSCEEEEEEEEEC
T ss_pred EEEEecCCCcCCEEEEEECCCChHHCEEEEEEEEECCCCeEEeEEEEEE
Confidence 0000000011123468899999999999999887654434666777766
No 348
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.17 E-value=1.8e-10 Score=66.45 Aligned_cols=32 Identities=13% Similarity=0.456 Sum_probs=24.9
Q ss_pred CceeEEecCCcEEEEEEEecC--CCCeeEEEecCC
Q psy15390 18 PSSVAVREEFNITLTCKAEGF--PAPEIKWRREDN 50 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~~ 50 (142)
+..+.+.+|++++|.|...+. +...+.|++ +.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k-~~ 43 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSSTTAQVTQVNWEQ-QD 43 (117)
T ss_dssp SCCEEEETTCCEEECEEEESCCCEEEEEEEEE-TT
T ss_pred cCCEEEecCCCEEEEEEecCCCCCEEEEEEEe-CC
Confidence 556788999999999998863 233689999 43
No 349
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.17 E-value=1e-10 Score=72.64 Aligned_cols=73 Identities=11% Similarity=0.248 Sum_probs=53.0
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
+|.+.. .+ ...+.+|++++|.|.+.+. .+.+.|++ +|..+... ......+..|.|.+++.+|+|.|.|.+.
T Consensus 99 ~p~i~~---~p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k-~g~~~~~~---~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 169 (188)
T 1oll_A 99 TPTLSV---HP-GPEVISGEKVTFYCRLDTA-TSMFLLLK-EGRSSHVQ---RGYGKVQAEFPLGPVTTAHRGTYRCFGS 169 (188)
T ss_dssp CCEEEE---ES-CSEEETTCEEEEEEECSSS-CSEEEEEE-ESSSCEEE---EEECSSEEEEEEEECCGGGCEEEEEECE
T ss_pred CCeEEE---CC-CCccccCCEEEEEEEcCCC-CCEEEEEE-CCcccccc---ccCCCceeEEEECCCCcCCCcEEEEEEE
Confidence 455554 23 3457899999999998654 46899999 77665431 1122334679999999999999999988
Q ss_pred ec
Q psy15390 88 KI 89 (142)
Q Consensus 88 ~~ 89 (142)
|.
T Consensus 170 n~ 171 (188)
T 1oll_A 170 YN 171 (188)
T ss_dssp EE
T ss_pred cC
Confidence 64
No 350
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=72.66 Aligned_cols=66 Identities=11% Similarity=0.198 Sum_probs=49.9
Q ss_pred EEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcce--EEeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 22 AVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKK--VHMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~--~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
.+.+|++++|.|.+.+. .+.+.|++ ++..+....... .....++.|.|.+++.+|+|.|+|.+.|.
T Consensus 110 ~v~~G~~v~L~C~~~~~-~~~~~w~k-~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 177 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRSP-MDTFLLCK-ERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHG 177 (196)
T ss_dssp EECTTCCEEEEEEEEEE-EEEEEEEE-TTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECG
T ss_pred eecCCCeEEEEEecCCC-CCEEEEEe-CCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcC
Confidence 67899999999999874 45899999 777654332111 11233467999999999999999999985
No 351
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.17 E-value=7.7e-10 Score=64.55 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=26.6
Q ss_pred CCceeEEecCCcEEEEEEEecCC----CCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP----APEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~----~~~~~w~~~ 48 (142)
.+..+.+.+|++|+|.|.+.+.+ .+.+.||+.
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (126)
T 4ffy_L 7 SPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQ 42 (126)
T ss_dssp ECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred CCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEE
Confidence 56678899999999999998765 457999983
No 352
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.17 E-value=1.3e-10 Score=71.59 Aligned_cols=61 Identities=15% Similarity=0.299 Sum_probs=51.1
Q ss_pred eeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecC
Q psy15390 20 SVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
...+.+|++++|.|.+.+.|.+.+.|++ ++..+ ......|.|.+++.+|+|.|+|.+.|..
T Consensus 106 ~~~v~~g~~~~l~C~~~~~p~~~v~W~~-~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 166 (184)
T 2ny1_B 106 DTHLLQGQSLTLTLESPPGSSPSVQCRS-PRGKN---------IQGGKTLSVSQLELQDSGTWTCTVLQNQ 166 (184)
T ss_dssp CSEEETTCCEEEEEECCTTCCCEEEEEC-TTSCE---------EEESSEEEESSCCGGGCEEEEEEEEETT
T ss_pred CceeecCCCEEEEEEcCCCCCCEEEEEe-CCCcc---------ccCceEEEEecCCcCCCeEEEEEEEECC
Confidence 3467899999999999888999999999 65443 2345689999999999999999998743
No 353
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.16 E-value=1.8e-10 Score=65.43 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=26.0
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.. .+.+.||+.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (108)
T 2coq_A 6 TPRIATKETGESLTINCVLRDTACALDSTNWYRT 39 (108)
T ss_dssp ECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEE
T ss_pred CCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEc
Confidence 56678899999999999987653 457999983
No 354
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.15 E-value=6.8e-10 Score=64.86 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=46.2
Q ss_pred CCceeEEecCCcEEEEEEEecC--CCCeeEEEec-CCcce--ecCCcceEEe--e---ccceEEEeecCCCCCeEEEEEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF--PAPEIKWRRE-DNQPI--SINKRKKVHM--H---YGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~-~~~~~--~~~~~~~~~~--~---~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
.+..+.+.+|++++|.|...+. +.+.+.||+. .+... ......++.. . ....|.|.+++.+|+|.|.|.+
T Consensus 6 ~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~ 85 (126)
T 3moq_A 6 TPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQA 85 (126)
T ss_dssp ECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEE
Confidence 5777889999999999999765 4567999983 12211 0111111111 1 1235788888888888888877
Q ss_pred Ee
Q psy15390 87 TK 88 (142)
Q Consensus 87 ~~ 88 (142)
.+
T Consensus 86 ~~ 87 (126)
T 3moq_A 86 FY 87 (126)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 355
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.15 E-value=2e-10 Score=69.80 Aligned_cols=62 Identities=16% Similarity=0.332 Sum_probs=50.3
Q ss_pred eeEEecCCcEEEEEEEe-cCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 20 SVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
...+.+|+.+.|.|.+. +.|.+.+.|++ ++..+.. ...+..|.|.++...|+|.|.|.+.|.
T Consensus 94 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~~-------~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 156 (170)
T 3ry4_A 94 HLEFQEGETIMLRCHSWKDKPLVKVTFFQ-NGKSQKF-------SHLDPTFSIPQANHSHSGDYHCTGNIG 156 (170)
T ss_dssp CSEECTTCCEEEEEEEGGGCCEEEEEEEE-TTEEEEE-------ESSCCEEEESSCCGGGCEEEEEEEEET
T ss_pred CceeecCCeEEEEEECCCCCCCceEEEEE-CCeEccc-------cCCCCeEEEEeccccCCEEEEEEEEeC
Confidence 45678899999999994 45667899999 8876542 223567999999999999999999875
No 356
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.15 E-value=2.4e-10 Score=78.27 Aligned_cols=66 Identities=11% Similarity=0.207 Sum_probs=44.8
Q ss_pred EecCCcEEEEEEEecC---CC-CeeEEEecCCcceecCCc---ceE---EeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 23 VREEFNITLTCKAEGF---PA-PEIKWRREDNQPISINKR---KKV---HMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~---~~-~~~~w~~~~~~~~~~~~~---~~~---~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
+.+|++++|.|.+.+. |. ..+.|++ ++..+..... .+. .......|.|.+++..|.|.|+|.+.+.
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~ 255 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFV-DDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSA 255 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEE-CCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecC
Confidence 6789999999999876 32 2699999 5544321110 000 1112236899999999999999998754
No 357
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.15 E-value=2.8e-10 Score=64.92 Aligned_cols=32 Identities=16% Similarity=0.336 Sum_probs=27.5
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.||+.
T Consensus 10 ~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~ 41 (111)
T 1i3g_L 10 SHKFMSTSVGDRVSITCKASQDVGTAVAWYQQ 41 (111)
T ss_dssp SCSEEECCTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred eCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEE
Confidence 56678899999999999998776678999983
No 358
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.15 E-value=9.2e-13 Score=91.50 Aligned_cols=66 Identities=12% Similarity=0.187 Sum_probs=45.8
Q ss_pred EecCCcEEEEEEEecCC----CCeeEEEecCCcceecCCcceEE------eeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 23 VREEFNITLTCKAEGFP----APEIKWRREDNQPISINKRKKVH------MHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~~----~~~~~w~~~~~~~~~~~~~~~~~------~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+......... ....+.|.|.+++..|.|.|.|.+.|.
T Consensus 242 v~~G~~~~L~C~~~g~~p~P~~~~i~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 317 (434)
T 1igy_B 242 LLITVTPKVTCVVVDISKDDPEVQFSWFV-DNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSA 317 (434)
T ss_dssp HSTTSCCEEEEEECCCCSSCCCCCBCBBS-SSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCS
T ss_pred cccCCCcEEEEEEeccccCCCCeEEEEEe-CCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECC
Confidence 77899999999998873 34799999 66655322111000 112346888888889999999988763
No 359
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.14 E-value=2e-10 Score=72.59 Aligned_cols=73 Identities=16% Similarity=0.309 Sum_probs=51.1
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecCCcceecCCc--ceEE-------eeccceEEEeecCCCCCeEEEEEE
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRREDNQPISINKR--KKVH-------MHYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~~~~~~~~~~--~~~~-------~~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+..+.+.+|++++|.|.+.+.| .+.+.|++ ++..+..... .+.. ....+.|.|.+++.+|+|.|+|.+
T Consensus 112 ~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 190 (213)
T 2x1w_L 112 SHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAA 190 (213)
T ss_dssp CSCEEEETTCCEEEEEEEEECTTBCCEEEEEC-SCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEcCCCCEEEEEEEECCCCCceEEEEEe-cCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEE
Confidence 3445789999999999999754 34799999 6665322110 0000 112346999999999999999999
Q ss_pred EecCC
Q psy15390 87 TKIGP 91 (142)
Q Consensus 87 ~~~~~ 91 (142)
.|...
T Consensus 191 ~N~~g 195 (213)
T 2x1w_L 191 SSGLM 195 (213)
T ss_dssp ECSSC
T ss_pred ecCCC
Confidence 98643
No 360
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.13 E-value=4.5e-10 Score=63.52 Aligned_cols=103 Identities=13% Similarity=0.096 Sum_probs=55.0
Q ss_pred eeEEecCCcEEEEEEEecCCCC---eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEEE
Q psy15390 20 SVAVREEFNITLTCKAEGFPAP---EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIFW 96 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~---~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~w 96 (142)
.+.+.+|++++|.|...+.+.. .+.|++ ......... ..+....+..... ...+ .+.+
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~-~~~~~~~~~-~~~~~~~g~~~~~-----~~~~------------r~~~ 63 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGK-GFCPWSQCT-NELLRTDERNVTY-----QKSS------------RYQL 63 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEES-SSCCSSSCS-SEEEEECSSSEEE-----ESCT------------TEEE
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEe-cCCCCCCce-eEEEEcCCcCccc-----cccc------------eEEE
Confidence 5678899999999998765432 489998 332110000 0101111110100 0001 1111
Q ss_pred EEEEeccccceEEEccCCCCCCeEEEEEEecCCCC-CeeeEEEEEEC
Q psy15390 97 EIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPP-SVSKRITVDVE 142 (142)
Q Consensus 97 ~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~V~ 142 (142)
... ......+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|+
T Consensus 64 ~~~-~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~l~V~V~ 109 (109)
T 2oyp_A 64 KGD-LNKGDVSLIIKNVTLDDHGTYCCRIQFPGLMNDKKLELKLDIK 109 (109)
T ss_dssp CSC-GGGTBCCEEECSCCGGGCEEEEEEECCSSTTCCEEEEEEEEEC
T ss_pred ccC-ccCCcEeEEEccCCChhCeEEEEEEEcCCcccceEEEEEEEeC
Confidence 000 1122357999999999999999999987543 23445555553
No 361
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.13 E-value=3.1e-10 Score=66.94 Aligned_cols=71 Identities=17% Similarity=0.317 Sum_probs=43.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee--cCCcceEEeecc---ceEEEeecCCCCCeEEEEEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS--INKRKKVHMHYG---EQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~--~~~~~~~~~~~~---~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
.+..+.+.+|++++|.|.+.+. +.+.||+.. ++.+. .....++....+ ..|.|.+++.+|+|.|.|.+.|.
T Consensus 23 ~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~ 99 (133)
T 3khq_A 23 HPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCD 99 (133)
T ss_dssp ECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSC
T ss_pred cCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeC
Confidence 5777889999999999999876 789999842 32211 001111111111 24666666666666666666553
No 362
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.13 E-value=3.6e-10 Score=64.70 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=25.9
Q ss_pred cceEEEccCCCCCCeEEEEEEec-CCCCCeeeEEEEEE
Q psy15390 105 GEQLNITKISRTEMGAYLCIATN-NVPPSVSKRITVDV 141 (142)
Q Consensus 105 ~~~l~i~~~~~~d~g~y~C~a~n-~~~~~~s~~~~l~V 141 (142)
..+|.|.+++.+|+|.|+|.+.+ ..+ ..+..+.|.|
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~-~~~~~~~L~V 114 (118)
T 3udw_C 78 NASLRMFGLRVEDEGNYTCLFVTFPQG-SRSVDIWLRV 114 (118)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTE-EEEEEEEEEE
T ss_pred CcEEEEeecChHHCeEEEEEEEECCCC-CccceEEEEE
Confidence 45688888888888888888887 444 3555666655
No 363
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.13 E-value=3e-11 Score=76.11 Aligned_cols=65 Identities=22% Similarity=0.464 Sum_probs=50.1
Q ss_pred ecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeec-CCCCCeEEEEEEEecCC
Q psy15390 24 REEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKI-SRTEMGAYLCIATKIGP 91 (142)
Q Consensus 24 ~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v-~~~d~G~y~C~~~~~~~ 91 (142)
.+|++++|.|. +.|.+.+.|++ ++..+............++.|.|.++ +..|+|.|+|.+.|...
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k-~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g 191 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQH-NDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKP 191 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEE-TTEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCG
T ss_pred ecCCcEEEEcC--CCCCCceEEEE-CCEECCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCC
Confidence 38999999998 67888899999 88776543221111224678999999 99999999999988643
No 364
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.13 E-value=1.7e-10 Score=66.67 Aligned_cols=109 Identities=15% Similarity=0.216 Sum_probs=58.3
Q ss_pred CCceeEEecCCcEEEEEEEecCCC----CeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCc
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPA----PEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPL 92 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~ 92 (142)
.+..+.+.+|++++|.|.+.+.+. +.+.|++. +..... ....+....++.. .........+.
T Consensus 11 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~-~~~~~~-~~~~i~~~~~~~~-~~~~~~~~~~r----------- 76 (126)
T 1eaj_A 11 PEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS-PADNQK-VDQVIILYSGDKI-YDDYYPDLKGR----------- 76 (126)
T ss_dssp SEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEE-ETTSSC-CSEEEEEEETTEE-ECTTSSTTTTT-----------
T ss_pred CCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEe-CCCcCC-CceEEEEEeCCee-ccccCccccCe-----------
Confidence 445678899999999999887554 34899983 211000 0000111111110 00000111111
Q ss_pred cEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 93 KIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 93 ~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
+.+..........+|.|.+++.+|+|.|+|.+.|..+. ....+.|.|
T Consensus 77 -~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~-~~~~~~L~V 123 (126)
T 1eaj_A 77 -VHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGV-ANKKIHLVV 123 (126)
T ss_dssp -EEECCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred -eEEEcccccCCeEEEEECcCChHHCeEEEEEEEcCCcc-CCcEEEEEE
Confidence 11000001122356999999999999999999988764 566666665
No 365
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.12 E-value=1.7e-10 Score=70.77 Aligned_cols=62 Identities=16% Similarity=0.320 Sum_probs=50.4
Q ss_pred eeEEecCCcEEEEEEEe-cCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 20 SVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
...+.+|+.+.|.|.+. +.|.+.+.|++ +|..+.. ...++.|.|.++...|+|.|+|.+.|.
T Consensus 94 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~~-------~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 156 (176)
T 1f2q_A 94 AEVVMEGQPLFLRCHGWRNWDVYKVIYYK-DGEALKY-------WYENHNISITNATVEDSGTYYCTGKVW 156 (176)
T ss_dssp CSEEETTSCEEEEEEEGGGCCEEEEEEEE-TTEECCS-------CCCSSEEEESSCCGGGCEEEEEEEEET
T ss_pred cceeeCCCCEEEEEEecCCCCceEEEEEE-CCEEEee-------ecCCCeEEECCCCcccCEEEEEEEEeC
Confidence 34677999999999994 56667899999 8876632 123568999999999999999999984
No 366
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.12 E-value=2.9e-10 Score=73.74 Aligned_cols=80 Identities=16% Similarity=0.333 Sum_probs=56.2
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee----------cCCcceEEee---ccceEEEee
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS----------INKRKKVHMH---YGEQLNITK 73 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~----------~~~~~~~~~~---~~~~l~i~~ 73 (142)
+|.+.. .+....+.+|++++|.|.+.+.+.+.+.|++.. +..+. .....++... ....|.|.+
T Consensus 138 ~~~~~~---~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 214 (256)
T 3umt_A 138 DIQLTQ---SPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISS 214 (256)
T ss_dssp CCCEEE---ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECS
T ss_pred ccEEEc---CCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECC
Confidence 556665 567788999999999999999888899999831 22221 0001122111 123599999
Q ss_pred cCCCCCeEEEEEEEecC
Q psy15390 74 ISRTEMGAYLCIATKIG 90 (142)
Q Consensus 74 v~~~d~G~y~C~~~~~~ 90 (142)
++.+|+|.|.|.+.+..
T Consensus 215 v~~~D~G~Y~C~~~~~~ 231 (256)
T 3umt_A 215 LESEDFVDYYCLQYASS 231 (256)
T ss_dssp CCGGGCSEEEEEECSSS
T ss_pred CChhHCEEEEEEEeeCC
Confidence 99999999999998753
No 367
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.12 E-value=2.4e-09 Score=68.76 Aligned_cols=119 Identities=13% Similarity=0.227 Sum_probs=70.9
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee---c----------CCcceEEee----ccceEEEeecCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS---I----------NKRKKVHMH----YGEQLNITKISRTE 78 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~---~----------~~~~~~~~~----~~~~l~i~~v~~~d 78 (142)
.+..+.+.+|++++|.|.+. .+.+.+.|++.. +..+. . ....++... ....|.|.+++.+|
T Consensus 5 ~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 83 (238)
T 1bec_A 5 SPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQ 83 (238)
T ss_dssp ECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGG
T ss_pred CCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCccc
Confidence 56778899999999999985 456789999842 22110 0 001122221 12479999999999
Q ss_pred CeEEEEEEEecCC--ccEEE----EEEEecc----ccceEEEcc-----CCCCCCeEEEEEEecC-CCC-CeeeE
Q psy15390 79 MGAYLCIATKIGP--LKIFW----EIIFHMH----YGEQLNITK-----ISRTEMGAYLCIATNN-VPP-SVSKR 136 (142)
Q Consensus 79 ~G~y~C~~~~~~~--~~~~w----~~~~~~~----~~~~l~i~~-----~~~~d~g~y~C~a~n~-~~~-~~s~~ 136 (142)
+|.|.|.+.+... ....+ ...+... ....+.+.. +..++...+.|.|.+. +.+ .+.|.
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 158 (238)
T 1bec_A 84 TSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWW 158 (238)
T ss_dssp CEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEE
T ss_pred CEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEE
Confidence 9999999987531 01111 1122211 112233321 2346677999999975 433 56664
No 368
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.11 E-value=5.2e-10 Score=70.04 Aligned_cols=65 Identities=14% Similarity=0.238 Sum_probs=46.9
Q ss_pred eEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEe--eccceEEEeecCCCCCeEEEEEEEec
Q psy15390 21 VAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHM--HYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~--~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
..+.+|++++|.|.+.+ +.+.+.|++ +|..+.......... ..+..|.|.+++ |+|.|.|.+.+.
T Consensus 117 ~~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 117 PTVLAGENVTLSCSSRS-SYDMYHLSR-EGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp SEECTTCEEEEEEEESS-CCSEEEEEE-TTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred CccCCCCeEEEEEeCCC-CCceEEEEE-CCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 36789999999999875 456899999 777654321111111 124579999998 999999998764
No 369
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.11 E-value=3e-10 Score=64.79 Aligned_cols=32 Identities=25% Similarity=0.458 Sum_probs=26.3
Q ss_pred CCceeEEecCCcEEEEEEEecCC----CCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP----APEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~----~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.
T Consensus 7 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (111)
T 1j05_L 7 SPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQ 42 (111)
T ss_dssp ECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred eCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEe
Confidence 46677889999999999998765 457999983
No 370
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.11 E-value=2.6e-10 Score=77.10 Aligned_cols=67 Identities=15% Similarity=0.224 Sum_probs=53.3
Q ss_pred EecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee--------ccceEEEeecCCCCCeEEEEEEEecC
Q psy15390 23 VREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH--------YGEQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--------~~~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
..+|+.+.|.|.+.+.|.+.+.|++ +|..+........... ..+.|.|.+++..|+|.|+|.+.|..
T Consensus 258 ~~~g~~v~l~C~~~g~P~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~ 332 (347)
T 2ifg_A 258 AVEMHHWCIPFSVDGQPAPSLRWLF-NGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPF 332 (347)
T ss_dssp CEESSSEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CccCceEEEEEEeeecCCCcEEEEe-CCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCC
Confidence 4579999999999999999999999 8887764433322221 24569999999999999999999853
No 371
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.11 E-value=4.6e-10 Score=72.96 Aligned_cols=80 Identities=15% Similarity=0.295 Sum_probs=55.2
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCC-----eeEEEec-CCcceec----------CCcceEEee---ccce
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAP-----EIKWRRE-DNQPISI----------NKRKKVHMH---YGEQ 68 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-----~~~w~~~-~~~~~~~----------~~~~~~~~~---~~~~ 68 (142)
+|.+.. .+..+.+.+|++++|.|.+.+.+.+ .+.|++. ++..+.. ....++... ....
T Consensus 121 ~~~v~~---~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 197 (256)
T 1nqb_A 121 DIELTQ---TPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFT 197 (256)
T ss_dssp CCCEEE---ECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEE
T ss_pred cccEEe---cCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEE
Confidence 455544 5667788999999999999887765 8999984 2333210 001122111 2246
Q ss_pred EEEeecCCCCCeEEEEEEEecC
Q psy15390 69 LNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 69 l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
|.|.+++.+|+|.|.|.+.+..
T Consensus 198 L~I~~v~~~DsG~Y~C~a~~~~ 219 (256)
T 1nqb_A 198 LKISRVEAEDLGVYYCFQGSHV 219 (256)
T ss_dssp EEESSCCGGGCEEEEEEECSSS
T ss_pred EEECCCChHHCEEEEEEEccCC
Confidence 9999999999999999998753
No 372
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.10 E-value=8.6e-10 Score=63.14 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=26.4
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.|++.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (113)
T 1sq2_N 6 TPRSVTKETGESLTINCVLRDASYALGSTCWYRK 39 (113)
T ss_dssp ECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEE
T ss_pred CCccEEEecCCCEEEEEEECCCcCCCCEEEEEEe
Confidence 56678899999999999997654 457999983
No 373
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.10 E-value=4e-09 Score=63.09 Aligned_cols=38 Identities=18% Similarity=0.383 Sum_probs=30.4
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+.+.+ .+..+.+.+|++++|.|.+.+.+.+.+.||+.
T Consensus 16 ~~~v~q---~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq 53 (146)
T 2yc1_B 16 EIVLTQ---SPATLSVSPGERATLSCRASQSVRSYLAWYQQ 53 (146)
T ss_dssp CCCEEE---ECSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred cceEEE---eCCEEEEecCCCEEEEEEECCCCCCEEEEEEE
Confidence 344555 57778899999999999998776678999984
No 374
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.10 E-value=7.9e-11 Score=73.10 Aligned_cols=57 Identities=26% Similarity=0.411 Sum_probs=47.4
Q ss_pred EecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 23 VREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
+.+|+++.|.|.+ |.+.+.|++ +|..+.... ...+.|.|.++...|+|.|+|.+.|.
T Consensus 119 ~~~G~~v~l~C~~---p~p~i~W~k-~g~~i~~~~------~~~~~L~i~~v~~~D~G~Y~C~a~N~ 175 (186)
T 1jbj_A 119 SRGDGSVLLTCGL---TDKTIKWLK-DGSIISPLN------ATKNTWNLGNNAKDPRGTYQCQGAKE 175 (186)
T ss_dssp CSSSCEEEEECSS---SCSCEEEEE-TTEECCCSS------CCSSCCEEEETTSCCEEEEEEEESSC
T ss_pred cCCCCeEEEEeeC---CCCeEEEEE-CCEECcccC------CCcceEEECCCCcCcCEEEEEEEEcC
Confidence 4489999999987 678999999 888765321 24567999999999999999999885
No 375
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.10 E-value=4.5e-10 Score=69.34 Aligned_cols=81 Identities=27% Similarity=0.480 Sum_probs=56.4
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecC--CcceecCC---cceEEee---ccceEEEeecCCC
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRRED--NQPISINK---RKKVHMH---YGEQLNITKISRT 77 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~--~~~~~~~~---~~~~~~~---~~~~l~i~~v~~~ 77 (142)
..+|.+.. . ....+.+|+.+.|.|.+.+.|.+.+.|++ + +..+.... ..++... ....|.|.++...
T Consensus 93 ~~~p~~~~---~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 167 (192)
T 2va4_A 93 FVQPHIIQ---L-KNETTYENGQVTLVCDAEGEPIPEITWKR-AVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLS 167 (192)
T ss_dssp EEEEEEEE---E-CCEEECTTSEEEEEEEEEEESCCEEEEEE-TTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGG
T ss_pred EccCcccc---c-CcceEEeCCeEEEEEEecCCCCCcEEEEe-CCCCceeeccccccCCcEEEeeccCceEEEEecCCcc
Confidence 34565544 2 23456779999999999999999999999 5 44443211 1122111 2357999999999
Q ss_pred CCeEEEEEEEecCC
Q psy15390 78 EMGAYLCIATKIGP 91 (142)
Q Consensus 78 d~G~y~C~~~~~~~ 91 (142)
|+|.|.|.+.|...
T Consensus 168 d~G~Y~C~a~n~~g 181 (192)
T 2va4_A 168 DSGRYDCEAASRIG 181 (192)
T ss_dssp GCEEEEEEEECSSC
T ss_pred cCEEEEEEEEecCC
Confidence 99999999998643
No 376
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=99.10 E-value=4e-10 Score=65.76 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=25.6
Q ss_pred CCceeEEecCCcEEEEEEEecCCCC----eeEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAP----EIKWRR 47 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~----~~~w~~ 47 (142)
.+..+.+.+|++++|.|.....+.+ .+.|++
T Consensus 8 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k 42 (128)
T 3r0n_A 8 VLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQR 42 (128)
T ss_dssp CCSEEECCTTSCEEECCEEESCCTTCEEEEEEEEC
T ss_pred cCCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEE
Confidence 4566788899999999999876554 789998
No 377
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.09 E-value=1.9e-09 Score=63.75 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=25.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCC---CeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPA---PEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~---~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+. +.+.|++.
T Consensus 12 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~ 46 (139)
T 1pko_A 12 PGHPIRALVGDEAELPCRISPGKNATGMEVGWYRS 46 (139)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC
T ss_pred CCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEEC
Confidence 445678999999999999876542 57999993
No 378
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=99.09 E-value=4.7e-10 Score=65.53 Aligned_cols=32 Identities=31% Similarity=0.487 Sum_probs=26.6
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+. +.+.+.||+.
T Consensus 9 ~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~ 41 (127)
T 2jju_A 9 PEKSVSVAAGESATLRCAMTSLIPVGPIMWFRG 41 (127)
T ss_dssp CCSEEEEETTSCEEECCEESCCCSCCCEEEEEC
T ss_pred eCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEec
Confidence 5667889999999999998765 4568999994
No 379
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.09 E-value=9.8e-11 Score=72.43 Aligned_cols=65 Identities=17% Similarity=0.292 Sum_probs=49.3
Q ss_pred eEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecC
Q psy15390 21 VAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
..+.+|++++|.|.+.+.+ +.+.|++ ++..+..... ....+..|.|.+++.+|+|.|.|.+.|..
T Consensus 103 ~~v~~G~~v~l~C~~~~~~-~~~~w~k-~g~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 167 (184)
T 2gi7_A 103 PAVSSGGDVTLQCQTRYGF-DQFALYK-EGDPAPYKNP---ERWYRASFPIITVTAAHSGTYRCYSFSSR 167 (184)
T ss_dssp CSSCCTTCEEEEEECSSCC-CEEEEEE-CCCCTTSCCC---CEEEEESSSEEEETTCCSEEEEEEEECTT
T ss_pred ceecCCCcEEEEEEcCCCC-cEEEEEE-CCCcCcceec---CCCceEEEEEccCCccCCeEEEEEEEeCC
Confidence 3567899999999987554 5899999 7776543211 12234578999999999999999999853
No 380
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.09 E-value=6.2e-10 Score=65.41 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=26.2
Q ss_pred CCceeEEecCCcEEEEEEEec---CCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEG---FPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~---~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.. .+.+.+.|++.
T Consensus 10 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~ 44 (135)
T 1xt5_A 10 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKG 44 (135)
T ss_dssp SCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEE
T ss_pred CCceEEEeCCCCEEEeeEeecCCCCCccEEEEEee
Confidence 566788999999999999763 46678999993
No 381
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.08 E-value=1.2e-09 Score=69.06 Aligned_cols=71 Identities=18% Similarity=0.390 Sum_probs=49.0
Q ss_pred eEEecCCcEEEEEEE-ecCCCCeeEEEecCCcceecCCcceEEeeccc---eEEEeecCCCCCeEEEEEEEecCC
Q psy15390 21 VAVREEFNITLTCKA-EGFPAPEIKWRREDNQPISINKRKKVHMHYGE---QLNITKISRTEMGAYLCIATKIGP 91 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~~ 91 (142)
..+.+|+.+.|.|.+ .+.|.+.+.|++.++..+............++ .|.|.+++..|.|.|+|.+.|...
T Consensus 120 ~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 194 (222)
T 4i0k_A 120 KDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVL 194 (222)
T ss_dssp ----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTT
T ss_pred ceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCC
Confidence 356789999999999 78888999999855555433222221122222 378999999999999999998643
No 382
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.08 E-value=8.8e-10 Score=62.62 Aligned_cols=28 Identities=11% Similarity=0.229 Sum_probs=22.2
Q ss_pred eeEEecCCcEEEEEEEecCCCC-----eeEEEe
Q psy15390 20 SVAVREEFNITLTCKAEGFPAP-----EIKWRR 47 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~~~-----~~~w~~ 47 (142)
.+.+.+|++++|+|...+.|.+ .+.|++
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 35 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQD 35 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEE
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEe
Confidence 4678899999999998765433 389999
No 383
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.07 E-value=5.9e-10 Score=71.75 Aligned_cols=74 Identities=15% Similarity=0.311 Sum_probs=52.5
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec-CCccee----------cCCcceEEee---ccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE-DNQPIS----------INKRKKVHMH---YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~-~~~~~~----------~~~~~~~~~~---~~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++. ++..+. .....++... ....|.|.+++.+|+|.|
T Consensus 141 ~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 220 (247)
T 2ghw_B 141 SPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVY 220 (247)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEE
T ss_pred cCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEE
Confidence 45667789999999999999988889999983 233221 0011122221 123699999999999999
Q ss_pred EEEEEecC
Q psy15390 83 LCIATKIG 90 (142)
Q Consensus 83 ~C~~~~~~ 90 (142)
.|.+.+..
T Consensus 221 ~C~a~~~~ 228 (247)
T 2ghw_B 221 YCQQRSNW 228 (247)
T ss_dssp EEEECSSS
T ss_pred EEEEccCC
Confidence 99998753
No 384
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.07 E-value=6.8e-10 Score=63.59 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=26.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCC------CeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPA------PEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~------~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+. +.+.|++.
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~ 44 (114)
T 1eeq_A 7 SPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQ 44 (114)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred cCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEE
Confidence 466788999999999999887652 57999983
No 385
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=2.7e-09 Score=62.93 Aligned_cols=73 Identities=25% Similarity=0.438 Sum_probs=43.6
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEecCCcc---eecCCc---ceEEe--------eccceEEEeecCCCCCeE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRREDNQP---ISINKR---KKVHM--------HYGEQLNITKISRTEMGA 81 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~~~~~---~~~~~~---~~~~~--------~~~~~l~i~~v~~~d~G~ 81 (142)
.+..+.+.+|++++|.|.+.+. +.+.+.||+..+.. +..... .++.. .....|.|.+++.+|+|.
T Consensus 14 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~ 93 (136)
T 2d9c_A 14 PEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGT 93 (136)
T ss_dssp CCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEE
T ss_pred cCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHCEE
Confidence 5667889999999999998765 45689999943221 110000 01100 012346666666666666
Q ss_pred EEEEEEec
Q psy15390 82 YLCIATKI 89 (142)
Q Consensus 82 y~C~~~~~ 89 (142)
|.|.+.+.
T Consensus 94 Y~C~~~~~ 101 (136)
T 2d9c_A 94 YYCVKFRK 101 (136)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 66666553
No 386
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.07 E-value=1.1e-09 Score=62.62 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=54.8
Q ss_pred CCceeEEecCCcEEEEEEEec-CCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIF 95 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~ 95 (142)
.+..+.+.+|++++|.|.... .....+.|++. ........ ..+....+..... ...+. +.
T Consensus 3 ~~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~-~~~~~~~~-~~~~~~~~~~~~~-----~~~~r------------~~ 63 (116)
T 2or8_A 3 SYVEVKGVVGHPVTLPCTYSTYRGITTTCWGRG-QCPSSACQ-NTLIWTNGHRVTY-----QKSSR------------YN 63 (116)
T ss_dssp CCEEEEEETTSCEEECCBCCCTTCCCCEEEEES-CCCSSSCT-TEEEEECSSSEEE-----ESSTT------------EE
T ss_pred CcceEEEEeCCcEEEEEEeeCCCCCcEEEEEEE-CCCCCCce-EEEEEeCCcccCc-----CCCCe------------EE
Confidence 455678999999999999865 33457999993 21100000 0000000000000 00000 10
Q ss_pred EEEEEeccccceEEEccCCCCCCeEEEEEEecCCCC-CeeeEEEEEE
Q psy15390 96 WEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPP-SVSKRITVDV 141 (142)
Q Consensus 96 w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~V 141 (142)
.. ........+|.|.+++.+|+|.|.|.+.+..+. .....+.|.|
T Consensus 64 ~~-~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V 109 (116)
T 2or8_A 64 LK-GHISEGDVSLTIENSVESDSGLYCCRVEIPGWFNDQKVTFSLQV 109 (116)
T ss_dssp CC-SCGGGTBCCEEESSCCGGGCEEEEEEECCSSTTCCEEEEEEEEE
T ss_pred Ee-cCCCCCeEEEEECCCCcccCEEEEEEEEcCCcccccEEEEEEEE
Confidence 00 001122346888899999999999998876533 1255556655
No 387
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=99.06 E-value=1e-09 Score=62.16 Aligned_cols=76 Identities=16% Similarity=0.299 Sum_probs=43.2
Q ss_pred cCCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEE---eeccceEEEeecCCCCCeEE
Q psy15390 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVH---MHYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 6 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~---~~~~~~l~i~~v~~~d~G~y 82 (142)
..+|.+.. .+.. .+..|++|+|.|..... ...+.|++ +|............ ......+.|..|+..|+|.|
T Consensus 7 ~pkPsL~a---~P~~-vv~~G~~VtL~C~~~~~-~~~f~l~k-~g~~~~~~~~~~~~~~~~~~~~~f~i~~vt~~~aG~Y 80 (106)
T 3kgr_A 7 LPRPSISA---EPGT-VIPLGSHVTFVCRGPVG-VQTFRLER-ESRSTYNDTEDVSQASPSESEARFRIDSVSEGNAGPY 80 (106)
T ss_dssp CCCCEEEE---ESCS-EEETTCCEEEEEEECTT-CCEEEEEE-GGGTEEEEECCCEEEETTEEEEEEEESSCCGGGCEEE
T ss_pred CCCCEEEE---eCCC-ccCCCCeEEEEEEccCC-CcEEEEEE-CCCccccccccccccCCCCcceEEEecCCCcCCCceE
Confidence 35677766 4544 67889999999997643 34688999 76654211000000 01123455555555555555
Q ss_pred EEEEE
Q psy15390 83 LCIAT 87 (142)
Q Consensus 83 ~C~~~ 87 (142)
+|...
T Consensus 81 ~C~~~ 85 (106)
T 3kgr_A 81 RCIYY 85 (106)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 55543
No 388
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.06 E-value=5.8e-10 Score=71.36 Aligned_cols=32 Identities=25% Similarity=0.412 Sum_probs=28.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+....+.+|++++|.|.+.+.|.+.+.|++.
T Consensus 133 ~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~ 164 (238)
T 2p1y_A 133 SPQSLTVWEGETAILNCSYENSAFDYFPWYQQ 164 (238)
T ss_dssp ECSEEEEETTSCEEEEEECCCTTCCEEEEEEE
T ss_pred cCceEEEeCCCeEEEEEEEecCCCCcEEEEEE
Confidence 46677889999999999999988889999993
No 389
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=99.06 E-value=1.5e-09 Score=62.63 Aligned_cols=32 Identities=31% Similarity=0.527 Sum_probs=26.8
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+. +.+.+.||+.
T Consensus 13 ~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~ 45 (120)
T 2yz1_A 13 PEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRG 45 (120)
T ss_dssp CSSEEEECTTCCEEECCEESCCCSCCCEEEEES
T ss_pred CCceEEEeCCCCEEEEeEECCCCCCcEEEEEcC
Confidence 5677889999999999998765 4568999993
No 390
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.06 E-value=4.5e-10 Score=72.67 Aligned_cols=80 Identities=19% Similarity=0.304 Sum_probs=54.8
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCC----eeEEEecC-Cccee---c-------CCcceEEee---ccceE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAP----EIKWRRED-NQPIS---I-------NKRKKVHMH---YGEQL 69 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~----~~~w~~~~-~~~~~---~-------~~~~~~~~~---~~~~l 69 (142)
+|.+.. .+....+.+|++++|.|.+.+.+.+ .+.|++.. +..+. . ....++... ....|
T Consensus 133 ~~~v~~---~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L 209 (253)
T 3uzq_A 133 ELVMTQ---TPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTL 209 (253)
T ss_dssp -CCEEE---ECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE
T ss_pred cceEEC---cCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEE
Confidence 455555 5667889999999999999887776 89999831 22211 0 001122111 12369
Q ss_pred EEeecCCCCCeEEEEEEEecC
Q psy15390 70 NITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 70 ~i~~v~~~d~G~y~C~~~~~~ 90 (142)
.|.+++.+|+|.|.|.+.|..
T Consensus 210 ~I~~v~~~DsG~Y~C~~~n~~ 230 (253)
T 3uzq_A 210 TINPVEADDVATYFCQRSNEV 230 (253)
T ss_dssp EESSCCGGGCEEEEEEECSSS
T ss_pred EECCCCHHHCEEEEEEEccCC
Confidence 999999999999999998753
No 391
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.06 E-value=8e-10 Score=71.44 Aligned_cols=73 Identities=11% Similarity=0.248 Sum_probs=53.0
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEE
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIAT 87 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 87 (142)
+|.+.. .+ ...+.+|++++|.|.+.+. .+.+.|++ +|..+... ......+..|.|.+++.+|+|.|+|.+.
T Consensus 102 ~P~i~~---~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k-~g~~~~~~---~~~~~~~~~l~I~~v~~~d~G~Y~C~a~ 172 (242)
T 1p6f_A 102 TPTLSV---HP-GPEVISGEKVTFYCRLDTA-TSMFLLLK-EGRSSHVQ---RGYGKVQAEFPLGPVTTAHRGTYRCFGS 172 (242)
T ss_dssp CCEEEE---ES-CSEEETTCEEEEEEECTTS-CSEEEEEE-CSSSCEEE---EEECSSEEEEEEEECCGGGCEEEEEEEE
T ss_pred CCceEc---cC-CCccCCCCcEEEEEecCCC-CCEEEEEE-CCCccCcc---ccCCCceEEEEeCCCccccCEEEEEEEE
Confidence 455554 23 2457899999999998754 45899999 77765431 1112334579999999999999999998
Q ss_pred ec
Q psy15390 88 KI 89 (142)
Q Consensus 88 ~~ 89 (142)
+.
T Consensus 173 n~ 174 (242)
T 1p6f_A 173 YN 174 (242)
T ss_dssp EE
T ss_pred CC
Confidence 75
No 392
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.06 E-value=1.3e-09 Score=69.01 Aligned_cols=73 Identities=15% Similarity=0.374 Sum_probs=54.6
Q ss_pred CceeEEecCCcEEEEEEEecCCCCeeEEEec---CCcceecCCcceEEe--------eccceEEEeecCCCCCeEEEEEE
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRRE---DNQPISINKRKKVHM--------HYGEQLNITKISRTEMGAYLCIA 86 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~---~~~~~~~~~~~~~~~--------~~~~~l~i~~v~~~d~G~y~C~~ 86 (142)
+....+.+|+.+.|.|.+.+.|.+.+.|++. +|..+.......... ...+.|.|.++...|+|.|+|.+
T Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 204 (231)
T 3ojm_B 125 PANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKV 204 (231)
T ss_dssp SCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEE
T ss_pred CCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEE
Confidence 4567788999999999999999999999983 455443332221111 12346999999999999999999
Q ss_pred EecC
Q psy15390 87 TKIG 90 (142)
Q Consensus 87 ~~~~ 90 (142)
.|..
T Consensus 205 ~n~~ 208 (231)
T 3ojm_B 205 SNYI 208 (231)
T ss_dssp EETT
T ss_pred Eecc
Confidence 9863
No 393
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.06 E-value=8e-09 Score=58.89 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=56.5
Q ss_pred CCceeEEecCCcEEEEEEEecCCC-CeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPA-PEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIF 95 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~ 95 (142)
.+..+.+.+|++++|.|....... ..+.|++..... .........+ .....+ .+ .+.
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~-----~~~~l~~~~~---------~~~~~~------~~--R~~ 64 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQR-----SCKTLVETDA---------SEQLVK------KN--RVS 64 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGG-----GCEEEEECCS---------SSCCEE------ET--TEE
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCC-----CCeEEEEecC---------cccccc------CC--CEE
Confidence 456678999999999999876443 359999932110 0000000000 000000 00 111
Q ss_pred EEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 96 WEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 96 w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
... ........|.|.+++.+|+|.|.|.+.+.. ......+.|.|
T Consensus 65 ~~~-~~~~~~~sL~I~~~~~~DsG~Y~C~v~~~~-~~~~~~v~L~V 108 (113)
T 1zox_A 65 IRD-NQRDFIFTVTMEDLRMSDAGIYWCGITKGG-LDPMFKVTVNI 108 (113)
T ss_dssp EEE-ETTTTEEEEEECSCCGGGCEEEEEEECCSS-SCCEEEEEEEE
T ss_pred EEE-CCcCCEEEEEEccCCHHHCEEEEEeeEcCC-CCccEEEEEEE
Confidence 110 011223468899999999999999998764 34566677766
No 394
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.05 E-value=1.5e-09 Score=69.44 Aligned_cols=75 Identities=20% Similarity=0.392 Sum_probs=55.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec---CCcceecCCcceEEe---------eccceEEEeecCCCCCeEEEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE---DNQPISINKRKKVHM---------HYGEQLNITKISRTEMGAYLC 84 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~---~~~~~~~~~~~~~~~---------~~~~~l~i~~v~~~d~G~y~C 84 (142)
.+....+.+|+.+.|.|.+.+.|.+.+.|++. ++..+.......... ...+.|.|.++...|+|.|+|
T Consensus 120 ~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 199 (241)
T 3grw_A 120 LPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLC 199 (241)
T ss_dssp TTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEE
T ss_pred CCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEE
Confidence 35566788899999999999999999999983 444443332221111 123469999999999999999
Q ss_pred EEEecCC
Q psy15390 85 IATKIGP 91 (142)
Q Consensus 85 ~~~~~~~ 91 (142)
.+.|...
T Consensus 200 ~a~N~~g 206 (241)
T 3grw_A 200 RATNFIG 206 (241)
T ss_dssp EEECSSC
T ss_pred EEecCcc
Confidence 9998643
No 395
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.05 E-value=1.1e-09 Score=68.90 Aligned_cols=112 Identities=14% Similarity=0.148 Sum_probs=61.6
Q ss_pred ecCCcEEEEEEEecCC----CCeeEEEecCCcceecCCcceEEeeccceEEEee---cCCCC---CeEEEEEEEecCCcc
Q psy15390 24 REEFNITLTCKAEGFP----APEIKWRREDNQPISINKRKKVHMHYGEQLNITK---ISRTE---MGAYLCIATKIGPLK 93 (142)
Q Consensus 24 ~~g~~v~l~C~~~~~~----~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~---v~~~d---~G~y~C~~~~~~~~~ 93 (142)
.+|+++.|.|.+.+.+ ...+.|++ ++..+............++.+.+.. +...| +|.|+|.+.|.....
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k-~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEE-TTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEE-CCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 6899999999998864 34899999 7766543211111112233444332 34445 999999999865432
Q ss_pred -EEEEEEE--eccccceEEEccCC----CCCCeEEEEEEecCCCC--CeeeE
Q psy15390 94 -IFWEIIF--HMHYGEQLNITKIS----RTEMGAYLCIATNNVPP--SVSKR 136 (142)
Q Consensus 94 -~~w~~~~--~~~~~~~l~i~~~~----~~d~g~y~C~a~n~~~~--~~s~~ 136 (142)
..-.... .......+.+.... .++...+.|.|.+...+ .+.|.
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 146 (207)
T 1l6x_A 95 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWE 146 (207)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred ceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEE
Confidence 2111100 11111222332211 23346899999974322 56664
No 396
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.05 E-value=3.8e-09 Score=68.83 Aligned_cols=73 Identities=15% Similarity=0.368 Sum_probs=50.7
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.||+.. +..+. .....++.... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 3456788999999999998765 5689999842 22111 00112322221 247999999
Q ss_pred CCCCCeEEEEEEEecC
Q psy15390 75 SRTEMGAYLCIATKIG 90 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~~ 90 (142)
+.+|+|.|.|.+.+..
T Consensus 87 ~~~DsG~Y~C~~~~~~ 102 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLT 102 (257)
T ss_dssp CGGGCEEEEEEEECCS
T ss_pred ChhhCEEEEEEEecCC
Confidence 9999999999998754
No 397
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=99.04 E-value=2.4e-09 Score=61.18 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=26.6
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.....+...+.||+.
T Consensus 7 ~p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq 38 (112)
T 1fo0_B 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQ 38 (112)
T ss_dssp ECSEEECCTTCCEEEEEEESCTTCCEEEEEEE
T ss_pred CCCeEEEecCCcEEEEEEeCCCCCceEEEEEE
Confidence 46677889999999999987666678999983
No 398
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.04 E-value=1.1e-09 Score=62.20 Aligned_cols=31 Identities=23% Similarity=0.531 Sum_probs=25.1
Q ss_pred CceeEEecCCcEEEEEE-EecCC-CCeeEEEec
Q psy15390 18 PSSVAVREEFNITLTCK-AEGFP-APEIKWRRE 48 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~-~~~~~-~~~~~w~~~ 48 (142)
|..+.+.+|++++|.|. ..+.+ .+.+.|++.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~ 39 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQ 39 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEE
Confidence 56778999999999999 76654 467999993
No 399
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.04 E-value=1.6e-08 Score=74.53 Aligned_cols=79 Identities=19% Similarity=0.349 Sum_probs=58.1
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeE-EEe-cCCcceecCCcceEEe-eccceEEEeecCCCCCeEEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIK-WRR-EDNQPISINKRKKVHM-HYGEQLNITKISRTEMGAYL 83 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~-w~~-~~~~~~~~~~~~~~~~-~~~~~l~i~~v~~~d~G~y~ 83 (142)
.+|.|.. +....+.+|+++.|.|.+.+.|.+.+. |++ .+|+.+.......+.. ...+.|.|.++...|.|.|.
T Consensus 164 ~~p~~~~----~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~ 239 (731)
T 2v5y_A 164 RTPHFLR----IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYR 239 (731)
T ss_dssp SSCEECC----CCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEE
T ss_pred ccccccc----ccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEE
Confidence 4677653 456889999999999999999999888 772 2777765332111100 11357999999999999999
Q ss_pred EEEEec
Q psy15390 84 CIATKI 89 (142)
Q Consensus 84 C~~~~~ 89 (142)
|.+.|.
T Consensus 240 c~A~n~ 245 (731)
T 2v5y_A 240 CMIRTE 245 (731)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 999875
No 400
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.04 E-value=1.4e-09 Score=70.40 Aligned_cols=36 Identities=19% Similarity=0.398 Sum_probs=29.9
Q ss_pred CeeeecCCCCceeEEecCCcEEEEEEEecCCCC-eeEEEe
Q psy15390 9 PNILDTESTPSSVAVREEFNITLTCKAEGFPAP-EIKWRR 47 (142)
Q Consensus 9 p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~~~w~~ 47 (142)
|.+.. .+....+.+|++++|.|.+.+.+.+ .+.|++
T Consensus 142 ~~~~~---~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 178 (257)
T 3gkz_A 142 IVLTQ---SPAIMSASPGEKVTLTCSASSSVSSSHLYWYQ 178 (257)
T ss_dssp CCEEC---SCSEEEECTTCCEEEEEEESSCCCGGGEEEEE
T ss_pred eEEEc---CCceEEEeCCCcEEEEEEEccCccceEEEEEE
Confidence 45544 5667889999999999999887777 899998
No 401
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=99.03 E-value=1.9e-09 Score=61.59 Aligned_cols=32 Identities=19% Similarity=0.379 Sum_probs=26.2
Q ss_pred CCceeEEecCCcEEEEEEEecCC-----CCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP-----APEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~-----~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+ .+.+.||+.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq 43 (113)
T 1dlf_L 7 TPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQ 43 (113)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred eCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEE
Confidence 46678899999999999987755 357999983
No 402
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.03 E-value=1.6e-08 Score=56.05 Aligned_cols=36 Identities=14% Similarity=0.287 Sum_probs=29.3
Q ss_pred CCceeEEecCCcEEEEEEEec-CCCCeeEEEecCCcc
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQP 52 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~ 52 (142)
+.....+..|+.+.|.|++.. .+.|.++|-+.++..
T Consensus 17 R~S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~ 53 (120)
T 2aw2_A 17 RQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTT 53 (120)
T ss_dssp TTEEEEEETTSCEEEEEEEECSSSCCEEEEEEECSSC
T ss_pred ecccceEecCCeEEEEccEEeccCCCceEEEecCCce
Confidence 344567889999999999988 588899999877643
No 403
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.03 E-value=4.9e-09 Score=67.84 Aligned_cols=119 Identities=18% Similarity=0.345 Sum_probs=70.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccc---eec----------CCcceEEeec----cceEEEeecCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQP---ISI----------NKRKKVHMHY----GEQLNITKISRTE 78 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~---~~~----------~~~~~~~~~~----~~~l~i~~v~~~d 78 (142)
.+..+.+.+|++++|.|.+. .+.+.+.|++.. +.. +.. ....++.... ...|.|.+++.+|
T Consensus 9 ~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 87 (252)
T 1oga_E 9 SPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNP 87 (252)
T ss_dssp SCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCC
T ss_pred cCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhh
Confidence 56778899999999999985 456789999842 211 100 0112333321 2479999999999
Q ss_pred CeEEEEEEEecCCccEEE----EEEEec----cccceEEEccCC-----CCCCeEEEEEEecC-CCC-CeeeE
Q psy15390 79 MGAYLCIATKIGPLKIFW----EIIFHM----HYGEQLNITKIS-----RTEMGAYLCIATNN-VPP-SVSKR 136 (142)
Q Consensus 79 ~G~y~C~~~~~~~~~~~w----~~~~~~----~~~~~l~i~~~~-----~~d~g~y~C~a~n~-~~~-~~s~~ 136 (142)
+|.|.|.+.+.......+ ...+.. .....+.+.... .++...+.|.+.+. +.+ .+.|.
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 160 (252)
T 1oga_E 88 TAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 160 (252)
T ss_dssp CEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEE
Confidence 999999998752111111 111211 011223332211 34667999999975 432 56664
No 404
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.03 E-value=1.1e-09 Score=69.24 Aligned_cols=70 Identities=23% Similarity=0.421 Sum_probs=46.9
Q ss_pred EEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceE---EEeecCCCCCeEEEEEEEecCC
Q psy15390 22 AVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQL---NITKISRTEMGAYLCIATKIGP 91 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l---~i~~v~~~d~G~y~C~~~~~~~ 91 (142)
.+.+|+.+.|.|.+.+.|.+.+.|++.++..+............++.+ .+..++..|.|.|+|.+.|...
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g 199 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDP 199 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTT
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCcc
Confidence 567899999999999999999999994366654322111112222222 2235667999999999998644
No 405
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.03 E-value=1.7e-09 Score=70.10 Aligned_cols=79 Identities=13% Similarity=0.278 Sum_probs=54.4
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCC-CeeEEEecC-Ccceec----------CCcceEEee---ccceEEEe
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPA-PEIKWRRED-NQPISI----------NKRKKVHMH---YGEQLNIT 72 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~-~~~~w~~~~-~~~~~~----------~~~~~~~~~---~~~~l~i~ 72 (142)
+|.+.. .+....+.+|++++|.|.+.+.+. +.+.|++.. +..+.. ....++... ....|.|.
T Consensus 149 ~~~~~~---~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 225 (256)
T 3juy_B 149 EIVLTQ---APGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTIT 225 (256)
T ss_dssp CCCEEE---ECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEEe---cCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEEC
Confidence 344555 567788999999999999988775 789999831 222210 001111111 12359999
Q ss_pred ecCCCCCeEEEEEEEec
Q psy15390 73 KISRTEMGAYLCIATKI 89 (142)
Q Consensus 73 ~v~~~d~G~y~C~~~~~ 89 (142)
+++.+|+|.|.|.+.+.
T Consensus 226 ~v~~~DsG~Y~C~~~~~ 242 (256)
T 3juy_B 226 RVEPEDFALYYCQVYGA 242 (256)
T ss_dssp SCCGGGCSEEEEEECCS
T ss_pred CCCHhHCEEEEEEEeeC
Confidence 99999999999999874
No 406
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.02 E-value=5.7e-10 Score=69.86 Aligned_cols=73 Identities=15% Similarity=0.354 Sum_probs=54.3
Q ss_pred CceeEEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceE--EeeccceEEEeecCCCCCeEEEEEEEecCC
Q psy15390 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKV--HMHYGEQLNITKISRTEMGAYLCIATKIGP 91 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~--~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~ 91 (142)
.....+..|+.+.+.|.+.+.|.+.+.|++ ++..+........ .....+.|.|.++...|.|.|+|.+.|...
T Consensus 125 ~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g 199 (218)
T 4frw_A 125 GPALEEGQGLTLAASCTAEGSPAPSVTWDT-EVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGL 199 (218)
T ss_dssp CSCEETTCCSEEEEEEEEEEBSCCEEEEEE-SSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred eeeeeeeeccccceeeeccCCcCceEEEEE-CCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCC
Confidence 445567789999999999999999999999 7766643221110 011234699999999999999999998643
No 407
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.59 E-value=2.6e-11 Score=69.16 Aligned_cols=32 Identities=25% Similarity=0.412 Sum_probs=27.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.
T Consensus 5 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~ 36 (110)
T 1u3h_A 5 SPQSLTVWEGETAILNCSYENSAFDYFPWYQQ 36 (110)
Confidence 46677889999999999998777778999983
No 408
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=99.02 E-value=1e-09 Score=63.39 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.1
Q ss_pred CCceeEEecCCcEEEEEEEecCC----CCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP----APEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~----~~~~~w~~~ 48 (142)
.+..+.+.+|++++|+|.....+ ...+.||+.
T Consensus 13 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 48 (120)
T 3noi_A 13 QPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRD 48 (120)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTSCCCEEEEEEES
T ss_pred CCCEEEEEcCCCEEEEeeecCCCCCCceeEEEEEec
Confidence 46678899999999999987654 446999994
No 409
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.01 E-value=1.5e-09 Score=71.37 Aligned_cols=31 Identities=19% Similarity=0.458 Sum_probs=26.9
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+.+.+ +.+.|++.
T Consensus 168 ~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~ 198 (282)
T 1qok_A 168 SPAIMSASPGEKVTITCSASSSV-SYMHWFQQ 198 (282)
T ss_dssp ECSEEEECTTCCEEEEEEESSCC-SCCEEEEE
T ss_pred CCCEEEEcCCCcEEEEEEecCCC-ceEEEEEE
Confidence 45667789999999999999888 89999983
No 410
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.01 E-value=9.6e-09 Score=64.75 Aligned_cols=72 Identities=18% Similarity=0.424 Sum_probs=50.3
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccceec--------CCcceEEeec------cceEEEeecCCCCCeE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPISI--------NKRKKVHMHY------GEQLNITKISRTEMGA 81 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~~--------~~~~~~~~~~------~~~l~i~~v~~~d~G~ 81 (142)
.+..+.+.+|++++|.|.+.+.. +.+.|++.. +..+.. ....|+.... ...|.|.+++.+|+|.
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~ 85 (207)
T 1ypz_E 7 SPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGT 85 (207)
T ss_dssp SCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEE
T ss_pred CCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEE
Confidence 56778899999999999987654 479999842 221110 0112222221 2479999999999999
Q ss_pred EEEEEEec
Q psy15390 82 YLCIATKI 89 (142)
Q Consensus 82 y~C~~~~~ 89 (142)
|.|.+.+.
T Consensus 86 Y~C~~~~~ 93 (207)
T 1ypz_E 86 YFCAADTW 93 (207)
T ss_dssp EEEEEECB
T ss_pred EEEEEecC
Confidence 99999875
No 411
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.01 E-value=9.6e-09 Score=71.74 Aligned_cols=73 Identities=14% Similarity=0.342 Sum_probs=51.0
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. +.... .....|+.... ...|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 86 (457)
T ss_dssp CCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC
Confidence 4457889999999999998865 5689999832 22110 01112332221 237999999
Q ss_pred CCCCCeEEEEEEEecC
Q psy15390 75 SRTEMGAYLCIATKIG 90 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~~ 90 (142)
+.+|+|.|.|.+.+..
T Consensus 87 ~~~D~G~Y~C~~~~~~ 102 (457)
T 1hzh_H 87 RSADTAVYYCARVGPY 102 (457)
T ss_dssp CGGGCEEEEEEECCCC
T ss_pred CcccCEEEEEEEecCC
Confidence 9999999999998764
No 412
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.01 E-value=8.1e-10 Score=71.71 Aligned_cols=73 Identities=15% Similarity=0.292 Sum_probs=45.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec-CCcceec----------CCcceEEee---ccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE-DNQPISI----------NKRKKVHMH---YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~-~~~~~~~----------~~~~~~~~~---~~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|.+.+.+.+.+.|++. ++..+.. ....++... ....|.|.+++.+|+|.|
T Consensus 145 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 224 (257)
T 1f3r_B 145 SPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATY 224 (257)
T ss_dssp ETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEE
T ss_pred cCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEE
Confidence 34566788999999999998888789999983 2222210 001111111 122566777777777777
Q ss_pred EEEEEec
Q psy15390 83 LCIATKI 89 (142)
Q Consensus 83 ~C~~~~~ 89 (142)
.|.+.|.
T Consensus 225 ~C~a~n~ 231 (257)
T 1f3r_B 225 FCYQYNN 231 (257)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 7766654
No 413
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.01 E-value=1e-09 Score=70.76 Aligned_cols=31 Identities=16% Similarity=0.549 Sum_probs=25.8
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRR 47 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~ 47 (142)
.+....+.+|++++|.|.+.+.+ .+.+.|++
T Consensus 137 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k 169 (250)
T 3esu_F 137 QSGPELVKPGASVKISCKDSGYAFSSSWMNWVK 169 (250)
T ss_dssp ECCCEEECTTCCEEEEEECCSTTGGGSEEEEEE
T ss_pred cCCceEEcCCceEEEEEEecCCcccCCEEEEEE
Confidence 34556788999999999998766 67899998
No 414
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=99.01 E-value=3.4e-09 Score=60.80 Aligned_cols=32 Identities=19% Similarity=0.453 Sum_probs=26.1
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|..... +...+.|++.
T Consensus 6 ~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~ 38 (116)
T 1tvd_A 6 SSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRI 38 (116)
T ss_dssp CSCCEEEETTCCEEECCEEECCSSSCCEEEEEE
T ss_pred CCCcEEEecCCeEEEEeEeEcCCCCcEEEEEEe
Confidence 5677889999999999998754 4557999983
No 415
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.99 E-value=4.2e-09 Score=60.05 Aligned_cols=32 Identities=28% Similarity=0.415 Sum_probs=27.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|...+.+...+.|++.
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq 37 (112)
T 2z35_A 6 TGGQVALSEEDFLTIHCNYSASGYPALFWYVQ 37 (112)
T ss_dssp SCSEEEEETTCCEEECCEEECSSCCEEEEEEE
T ss_pred CCCcEEEcCCCCEEEEEEECCCCCCeEEEEEE
Confidence 56778899999999999998776678999983
No 416
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.99 E-value=2.6e-10 Score=71.78 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=49.8
Q ss_pred EecCCcEEEEEEEec-CCCC-eeEEEecCCcceecCCcceEE--------eeccceEEEeecCCCCCeEEEEEEEecCCc
Q psy15390 23 VREEFNITLTCKAEG-FPAP-EIKWRREDNQPISINKRKKVH--------MHYGEQLNITKISRTEMGAYLCIATKIGPL 92 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~--------~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~ 92 (142)
..+|+.++|.|.+.+ .|.+ .+.|++ +|..+......... ....+.|.|.++...|.|.|+|.+.|.+..
T Consensus 124 ~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 124 QLTSGGASVVCFLNNFYPKDINVKWKI-DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 202 (213)
T ss_dssp HHHTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred hcCCCcEEEEEEEeeecCCceEEEEEc-CCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence 346899999999987 5554 799999 88877544110000 011237999999999999999999986543
No 417
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.99 E-value=2.1e-08 Score=59.77 Aligned_cols=32 Identities=19% Similarity=0.460 Sum_probs=27.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.+...+...+.||+.
T Consensus 6 ~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq 37 (143)
T 3u6r_L 6 SPATLSLSPGERATLSCRASQSVNKYLAWYQQ 37 (143)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCCEEEEeCCCCEEEEEEECCCCceeeEEEEE
Confidence 56678899999999999998766667999983
No 418
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.99 E-value=2.8e-09 Score=69.93 Aligned_cols=72 Identities=17% Similarity=0.338 Sum_probs=45.0
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee---------------cCCcceEEeec-----cceEEEeec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS---------------INKRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~-----~~~l~i~~v 74 (142)
+....+.+|++++|.|.+.+.+ .+.+.|++.+ +..+. .....++.... ...|.|.++
T Consensus 141 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 220 (276)
T 3auv_A 141 SGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSL 220 (276)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCC
Confidence 4466788999999999998765 4789999932 22210 00111222211 125777777
Q ss_pred CCCCCeEEEEEEEec
Q psy15390 75 SRTEMGAYLCIATKI 89 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~ 89 (142)
+.+|+|.|.|.+.|.
T Consensus 221 ~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 221 RAEDTAVYYCARFVF 235 (276)
T ss_dssp CGGGCEEEEEEEECS
T ss_pred ChhHCEEEEEEEEcC
Confidence 777777777777665
No 419
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.99 E-value=1.5e-09 Score=69.06 Aligned_cols=72 Identities=15% Similarity=0.240 Sum_probs=46.9
Q ss_pred CceeEEecCCcEEEEEEEec-CCCCeeEEEecCCcceecCCcceEEeeccc---eEEEeecCCCCCeEEEEEEEecC
Q psy15390 18 PSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQPISINKRKKVHMHYGE---QLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
.....+.+|+.+.|.|.+.+ .|.+.+.|++.++..+....... ....++ .+.+.+++.+|.|.|+|.+.|..
T Consensus 125 ~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~-~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~ 200 (226)
T 4f80_A 125 HVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPV-VADGVGLYAVAASVIMRGSSGEGVSCTIRSSL 200 (226)
T ss_dssp EEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCC-EECTTSCEEEEEEEEECC----CEEEEEEETT
T ss_pred cceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEE-EECCCCcEEEEEEEEechhcCcEEEEEEEeCC
Confidence 34556788999999999988 58899999985555554332222 222232 24455788999999999999864
No 420
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=98.99 E-value=8.1e-09 Score=67.47 Aligned_cols=72 Identities=14% Similarity=0.398 Sum_probs=48.0
Q ss_pred ceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Cccee--------------cCCcceEEeecc-----ceEEEeecCC
Q psy15390 19 SSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPIS--------------INKRKKVHMHYG-----EQLNITKISR 76 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~--------------~~~~~~~~~~~~-----~~l~i~~v~~ 76 (142)
..+.+.+|++++|.|.+.+.. ...+.||+.. +.... .....|+....+ ..|.|.+++.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (263)
T 3iu4_H 8 GPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQT 87 (263)
T ss_dssp CCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCH
Confidence 356789999999999997533 4579999732 22110 001123322211 2499999999
Q ss_pred CCCeEEEEEEEecC
Q psy15390 77 TEMGAYLCIATKIG 90 (142)
Q Consensus 77 ~d~G~y~C~~~~~~ 90 (142)
+|+|.|.|.+.+..
T Consensus 88 ~DsG~Y~C~~~~~~ 101 (263)
T 3iu4_H 88 DDTAMYYCARSGVR 101 (263)
T ss_dssp GGCEEEEEEEEECC
T ss_pred HHCEEEEEEEEeCC
Confidence 99999999998753
No 421
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.99 E-value=3.9e-09 Score=61.88 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=25.8
Q ss_pred CCceeEEecCCcEEEEEEEec-------CCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-------FPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-------~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.... .....+.|++.
T Consensus 12 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~ 50 (132)
T 1nko_A 12 MQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRA 50 (132)
T ss_dssp ECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC
T ss_pred CCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEEC
Confidence 566788999999999999873 34467999993
No 422
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.98 E-value=4.9e-09 Score=67.99 Aligned_cols=37 Identities=19% Similarity=0.381 Sum_probs=29.4
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEe
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRR 47 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~ 47 (142)
.+|.+.. .+....+.+|++++|.|.+.+. .+.+.|++
T Consensus 136 ~~~~v~~---~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k 172 (256)
T 3tf7_C 136 SEAAVTQ---SPRNKVTVTGENVTLSCRQTNS-HNYMYWYR 172 (256)
T ss_dssp --CCEEE---SCSEEEEETTCCEEECEEECSC-CSEEEEEE
T ss_pred CccEEEe---cCCEEEEeCCCcEEEEEEcCCC-ceEEEEEE
Confidence 3566666 6777888899999999999876 66899998
No 423
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.98 E-value=2.4e-09 Score=61.91 Aligned_cols=108 Identities=17% Similarity=0.135 Sum_probs=55.0
Q ss_pred CCceeEEecCCcEEEEEEEecC----CCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCc
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF----PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPL 92 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~----~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~ 92 (142)
.+..+.+.+|++++|.|..... +...+.|++. +..- .....+.....+..... ......|
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~-~~~~--~~~~~i~~~~~~~~~~~-~~~~~~~------------ 68 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQ-PEGG--RDAISIFHYAKGQPYID-EVGTFKE------------ 68 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEE-ETTC--CCCEEEEEEETTEEEEC-SSSTTTT------------
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEc-CCCC--CceEEEEEecCCeeccc-cCccccC------------
Confidence 4567789999999999998643 3567999983 2110 00000011111111000 0000011
Q ss_pred cEEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCC-CeeeEEEEEE
Q psy15390 93 KIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPP-SVSKRITVDV 141 (142)
Q Consensus 93 ~~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~-~~s~~~~l~V 141 (142)
.+.+... ......+|.|.+++.+|+|.|+|.+.+..+. ..+..+.|.|
T Consensus 69 R~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V 117 (124)
T 1neu_A 69 RIQWVGD-PSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYV 117 (124)
T ss_dssp CEEECCB-GGGTBCCEEECSCCGGGCEEEEEEEEC----CCEEEEEEEEE
T ss_pred cEEEecC-CcCCeEEEEEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEE
Confidence 1111100 1123556889999999999999999887664 2355566655
No 424
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.98 E-value=5.2e-09 Score=60.07 Aligned_cols=32 Identities=25% Similarity=0.435 Sum_probs=26.6
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|...+. +...+.||+.
T Consensus 6 ~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq 38 (116)
T 1fo0_A 6 TQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQ 38 (116)
T ss_dssp CCCEEEEETTCCEEECCEECCCCSSCEEEEEEE
T ss_pred CCCcEEEecCCcEEEEeEecCCCCCeEEEEEEe
Confidence 5677889999999999998776 5558999983
No 425
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.98 E-value=1.9e-09 Score=61.75 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=23.1
Q ss_pred CCceeEEecCCcEEEEEEEecC--CCCeeEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF--PAPEIKWRR 47 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~ 47 (142)
.+..+.+.+|++++|+|..... ....+.|++
T Consensus 3 sp~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~ 35 (115)
T 2or7_A 3 SHTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGL 35 (115)
T ss_dssp ---CEEEETTSCEEECCBCCHHHHCSCCEEEEE
T ss_pred CccEEEEEcCCCEEEEEEeecCCCCCEEEEEEC
Confidence 4567789999999999998653 245799999
No 426
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.98 E-value=2.8e-09 Score=70.51 Aligned_cols=73 Identities=19% Similarity=0.328 Sum_probs=47.1
Q ss_pred CCceeEEecCCcEEEEEEEecCCCC------eeEEEecC-Cccee---cC-------CcceEEee---ccceEEEeecCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAP------EIKWRRED-NQPIS---IN-------KRKKVHMH---YGEQLNITKISR 76 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~------~~~w~~~~-~~~~~---~~-------~~~~~~~~---~~~~l~i~~v~~ 76 (142)
.+..+.+.+|++++|.|.+.+.+.+ .+.|++.. +..+. .. ...++... ....|.|.+++.
T Consensus 165 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 244 (291)
T 2gki_A 165 SPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQA 244 (291)
T ss_dssp SCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCH
Confidence 4567789999999999999887665 89999942 22111 00 01111111 113578888888
Q ss_pred CCCeEEEEEEEec
Q psy15390 77 TEMGAYLCIATKI 89 (142)
Q Consensus 77 ~d~G~y~C~~~~~ 89 (142)
+|+|.|.|.+.+.
T Consensus 245 ~DsG~Y~C~a~~~ 257 (291)
T 2gki_A 245 EDLAVYYCKQSYY 257 (291)
T ss_dssp GGCEEEEEEEEET
T ss_pred HHCEEEEEEEccC
Confidence 8888888877764
No 427
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.98 E-value=4.6e-10 Score=65.09 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=23.5
Q ss_pred CCceeEEecCCcEEEEEEEe-cCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAE-GFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~ 48 (142)
...++.+.+|++|+|.|... ......+.|++.
T Consensus 10 ~~~pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~ 42 (121)
T 2edo_A 10 HLVHMTVVSGSNVTLNISESLPENYKQLTWFYT 42 (121)
T ss_dssp CCBCCEEETTSCEEECCSSCCCSSEEEEEEEEE
T ss_pred CcEEEEEEeCCCEEEeCCCCCCCceeEEEEEcC
Confidence 34457889999999999863 233457899993
No 428
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.97 E-value=1.4e-08 Score=59.45 Aligned_cols=31 Identities=29% Similarity=0.492 Sum_probs=25.6
Q ss_pred CCceeEEecCCcEEEEEEEecCC-CCeeEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP-APEIKWRR 47 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~-~~~~~w~~ 47 (142)
.+..+.+.+|++++|.|...+.. ...+.||+
T Consensus 7 ~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyr 38 (129)
T 3rrq_A 7 SPALLVVTEGDNATFTCSFSNTSESFVLNWYR 38 (129)
T ss_dssp ECSEEEEETTSCEEEEEECCCCC-CEEEEEEE
T ss_pred CCCEEEEeCCCCEEEEeEecCCCCCcEEEEeE
Confidence 56778899999999999987654 34689998
No 429
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.97 E-value=1.8e-09 Score=61.36 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=24.4
Q ss_pred CceeEEecCCcEEEEEEEecCC-CCeeEEEe
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP-APEIKWRR 47 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~-~~~~~w~~ 47 (142)
|..+.+.+|++++|.|...... ...+.|++
T Consensus 3 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r 33 (110)
T 2q87_A 3 ARTVAGPVGGSLSVQCPYEKEHRTLNKYWCR 33 (110)
T ss_dssp EEEEEECTTSCEEEEEECCGGGTTSEEEEES
T ss_pred CcEEEEeCCCcEEEEeEecCCcCCceEEEEe
Confidence 4567889999999999987643 35799998
No 430
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.97 E-value=9.1e-10 Score=64.16 Aligned_cols=62 Identities=13% Similarity=0.064 Sum_probs=48.5
Q ss_pred CeEEEEEEEecCCccEEEEEEE-----------ec--------cccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEE
Q psy15390 79 MGAYLCIATKIGPLKIFWEIIF-----------HM--------HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITV 139 (142)
Q Consensus 79 ~G~y~C~~~~~~~~~~~w~~~~-----------~~--------~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l 139 (142)
.-...|.+...+.+.++|.+.. .. ...+.|.|..+...|+|.|+|.|.|..|. .+..+.|
T Consensus 17 ~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~-~~~t~~l 95 (126)
T 1he7_A 17 HWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQ-ASASIMA 95 (126)
T ss_dssp EEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEE-EEEEEEE
T ss_pred cEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCe-EEEEEEE
Confidence 3447888999999999997521 10 11357999999999999999999999996 6777777
Q ss_pred EE
Q psy15390 140 DV 141 (142)
Q Consensus 140 ~V 141 (142)
.|
T Consensus 96 ~v 97 (126)
T 1he7_A 96 AF 97 (126)
T ss_dssp CC
T ss_pred EE
Confidence 65
No 431
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.97 E-value=5.1e-09 Score=60.68 Aligned_cols=32 Identities=19% Similarity=0.363 Sum_probs=25.8
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
.+..+.+.+|++|+|.|...+.. .+.+.||+.
T Consensus 6 ~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq 39 (121)
T 2i24_N 6 TPQRITKETGESLTINCVVRDSRCVLSTGYWYRK 39 (121)
T ss_dssp ECSEEEEETTCCEEEEEEECSCCCCEEEEEEEEE
T ss_pred CCcEEEEecCCcEEEEeEccCCCCCCCEEEEEEe
Confidence 46678899999999999987653 357999984
No 432
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=98.97 E-value=3.7e-09 Score=69.18 Aligned_cols=69 Identities=16% Similarity=0.456 Sum_probs=45.5
Q ss_pred ceeEEecCCcEEEEEEEec--CCCCeeEEEecC-Cccee---------------cCCcceEEeecc-----ceEEEeecC
Q psy15390 19 SSVAVREEFNITLTCKAEG--FPAPEIKWRRED-NQPIS---------------INKRKKVHMHYG-----EQLNITKIS 75 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~--~~~~~~~w~~~~-~~~~~---------------~~~~~~~~~~~~-----~~l~i~~v~ 75 (142)
..+.+.+|++++|.|...+ .....+.||+.. +..+. .....|+....+ .+|.|.+++
T Consensus 31 ~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (267)
T 3u1s_H 31 GAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLT 110 (267)
T ss_dssp CCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCC
T ss_pred CCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 3567899999999999865 234578998732 21110 001123322221 249999999
Q ss_pred CCCCeEEEEEEE
Q psy15390 76 RTEMGAYLCIAT 87 (142)
Q Consensus 76 ~~d~G~y~C~~~ 87 (142)
.+|+|.|.|.+.
T Consensus 111 ~~DsG~Y~C~~~ 122 (267)
T 3u1s_H 111 ADDTAIYYCLTG 122 (267)
T ss_dssp GGGCEEEEEEEE
T ss_pred hhhCEEEEEEEC
Confidence 999999999874
No 433
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.97 E-value=4.1e-10 Score=70.87 Aligned_cols=80 Identities=24% Similarity=0.421 Sum_probs=54.1
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecC-CC-CeeEEEecCCcceecCCcc--eEE----eeccceEEEeecCCCC
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGF-PA-PEIKWRREDNQPISINKRK--KVH----MHYGEQLNITKISRTE 78 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~--~~~----~~~~~~l~i~~v~~~d 78 (142)
.+|.+.. .+....+.+|+.++|.|.+.+. |. +.+.|++ +|..+..+... ... ....+.|.|.++...|
T Consensus 113 ~~P~i~~---~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 188 (213)
T 3mj8_L 113 AAPSVTL---FPPSSEELKTNQATLVCMINGFYPADVAVTWEA-DGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKS 188 (213)
T ss_dssp BCCEEEE---ECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHS
T ss_pred CCCeEEc---cCCCcccccCCcEEEEEEeeceeCCCeEEEEEc-CCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCC
Confidence 4555544 3333334479999999999884 33 4899999 88877542110 000 1122458999999999
Q ss_pred CeEEEEEEEecC
Q psy15390 79 MGAYLCIATKIG 90 (142)
Q Consensus 79 ~G~y~C~~~~~~ 90 (142)
.|.|+|.+.|..
T Consensus 189 ~G~Y~C~a~n~~ 200 (213)
T 3mj8_L 189 RNTFICKVTHGG 200 (213)
T ss_dssp CSCEEEEEEETT
T ss_pred CCEEEEEEEECC
Confidence 999999999864
No 434
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.96 E-value=1.6e-08 Score=58.78 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=24.8
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
+..+.+.+|++|+|.|...+.+ ...+.||+.
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq 39 (123)
T 3t0v_A 7 SPSVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQ 39 (123)
T ss_dssp CCCEEECTTCCEEEEEECCTTTTTTSCEEEEEE
T ss_pred cCeEEEcCCCCEEEEEecCCCccCCCeEEEEEE
Confidence 3467899999999999987654 357999983
No 435
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.95 E-value=4.1e-10 Score=70.87 Aligned_cols=32 Identities=22% Similarity=0.502 Sum_probs=27.0
Q ss_pred EEecCCcEEEEEEEec-CCCCeeEEEecCCccee
Q psy15390 22 AVREEFNITLTCKAEG-FPAPEIKWRREDNQPIS 54 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~-~~~~~~~w~~~~~~~~~ 54 (142)
.+.+|+.++|.|.+.+ .|.+.+.|++ +|..+.
T Consensus 125 ~~~~g~~v~l~C~~~g~~P~~~v~W~k-~g~~~~ 157 (213)
T 3nl4_L 125 DLVATGTVTIVCVANKYFPDVTVTWEV-DGTTQT 157 (213)
T ss_dssp HHHTTSEEEEEEEEEEEBSCCEEEEEE-TTEECC
T ss_pred hhccCCcEeEEEEEecccCCcEEEEEe-CCccCC
Confidence 3456999999999988 8888999999 887664
No 436
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.95 E-value=3.1e-09 Score=78.34 Aligned_cols=114 Identities=15% Similarity=0.185 Sum_probs=72.6
Q ss_pred CcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEee----ccceEEEeecCCCCCeEE--------------------
Q psy15390 27 FNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH----YGEQLNITKISRTEMGAY-------------------- 82 (142)
Q Consensus 27 ~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~----~~~~l~i~~v~~~d~G~y-------------------- 82 (142)
..+.|.|.+.+.|.+.+.|.+ +|..+.......+.+. ....+.+..+...+.|.|
T Consensus 92 g~l~v~c~~~g~P~p~i~W~k-~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~~ 170 (731)
T 2v5y_A 92 GLLNVYVKVNNGPLGNPIWNI-SGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLR 170 (731)
T ss_dssp EEEEEEEEETTCCCCSEEEEE-CCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEECC
T ss_pred ceEEEEEecCCCCccceeEEE-eCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccccccccc
Confidence 478999999999999999999 6655432222222221 112355555555555544
Q ss_pred --------------EEEEEecCCccEE-EEEE----------Ee-cc---ccceEEEccCCCCCCeEEEEEEecCCCCCe
Q psy15390 83 --------------LCIATKIGPLKIF-WEII----------FH-MH---YGEQLNITKISRTEMGAYLCIATNNVPPSV 133 (142)
Q Consensus 83 --------------~C~~~~~~~~~~~-w~~~----------~~-~~---~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~ 133 (142)
.|.+...+.+.+. |.+. .. .. ..+.|.|..+..+|+|.|+|.|.|..|...
T Consensus 171 ~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~ 250 (731)
T 2v5y_A 171 IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGI 250 (731)
T ss_dssp CCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEE
T ss_pred ccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcc
Confidence 4444444556776 6521 01 11 135799999999999999999999998645
Q ss_pred eeEEEEEE
Q psy15390 134 SKRITVDV 141 (142)
Q Consensus 134 s~~~~l~V 141 (142)
+..+.|.|
T Consensus 251 s~~~~l~V 258 (731)
T 2v5y_A 251 SNYAELVV 258 (731)
T ss_dssp CCCEEEEE
T ss_pred eeeEEEEE
Confidence 55566655
No 437
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.95 E-value=2.9e-09 Score=68.89 Aligned_cols=29 Identities=28% Similarity=0.574 Sum_probs=24.3
Q ss_pred eeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 20 SVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
...+.+|++++|.|.+.+.+ .+.+.|++.
T Consensus 143 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 143 GGLVQPGGSLRLSCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CeEEcCCCeEEEEEEEeCCcccccEEEEEEE
Confidence 44588999999999998766 678999983
No 438
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.95 E-value=5.1e-09 Score=60.45 Aligned_cols=70 Identities=16% Similarity=0.237 Sum_probs=41.3
Q ss_pred eeEEecCCcEEEEEEEecCC---CCeeEEEecC-Ccc---eec-------CCcceEEeec---cceEEEeecCCCCCeEE
Q psy15390 20 SVAVREEFNITLTCKAEGFP---APEIKWRRED-NQP---ISI-------NKRKKVHMHY---GEQLNITKISRTEMGAY 82 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~---~~~~~w~~~~-~~~---~~~-------~~~~~~~~~~---~~~l~i~~v~~~d~G~y 82 (142)
.+.+.+|++++|.|...+.+ ...+.||+.. +.. +.. ....++.... ...|.|.+++.+|+|.|
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~DsG~Y 88 (120)
T 1oaq_L 9 ALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIY 88 (120)
T ss_dssp EEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCEEE
T ss_pred cEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhCeEE
Confidence 47889999999999987764 4579999832 211 100 0011111111 12466677777777777
Q ss_pred EEEEEec
Q psy15390 83 LCIATKI 89 (142)
Q Consensus 83 ~C~~~~~ 89 (142)
.|.+.+.
T Consensus 89 ~C~~~~~ 95 (120)
T 1oaq_L 89 FCALWYS 95 (120)
T ss_dssp EEEEEET
T ss_pred EEEEccC
Confidence 7766543
No 439
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.95 E-value=3.2e-08 Score=56.62 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=24.2
Q ss_pred CceeEEecCCcEEEEEEEecC---CCCeeEEEe
Q psy15390 18 PSSVAVREEFNITLTCKAEGF---PAPEIKWRR 47 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~---~~~~~~w~~ 47 (142)
+..+.+.+|++++|.|..... +...+.||+
T Consensus 5 ~~~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~r 37 (116)
T 3bj9_1 5 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQ 37 (116)
T ss_dssp CSEEEEETTCCEEEEEEECSSSCGGGCCEEEEE
T ss_pred CCcEEEcCCCcEEEEEEeecCccCCCceEEEEE
Confidence 345789999999999998754 345799998
No 440
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.95 E-value=4.8e-10 Score=70.49 Aligned_cols=68 Identities=15% Similarity=0.241 Sum_probs=48.4
Q ss_pred EecCCcEEEEEEEec-CCCC-eeEEEecCCcceecC-Cc-ceEEee------ccceEEEeecCCCCCeEEEEEEEecCC
Q psy15390 23 VREEFNITLTCKAEG-FPAP-EIKWRREDNQPISIN-KR-KKVHMH------YGEQLNITKISRTEMGAYLCIATKIGP 91 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~-~~~~-~~~w~~~~~~~~~~~-~~-~~~~~~------~~~~l~i~~v~~~d~G~y~C~~~~~~~ 91 (142)
+.+|+.++|.|.+.+ .|.+ .+.|++ +|+.+... .. ...... ..+.|.|.++...|+|.|+|.+.|.+.
T Consensus 123 ~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 123 QLATGGASVVCLMNNFYPRDISVKWKI-DGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp HHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred hccCCcEEEEEEEEeEeCCceEEEEEe-CCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 346999999999987 4443 799999 88876543 10 000011 113689999999999999999998654
No 441
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.94 E-value=3.9e-09 Score=66.97 Aligned_cols=99 Identities=19% Similarity=0.302 Sum_probs=64.7
Q ss_pred CCceeEEecCCcE-EEEEEE-ecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccE
Q psy15390 17 TPSSVAVREEFNI-TLTCKA-EGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKI 94 (142)
Q Consensus 17 ~~~~~~~~~g~~v-~l~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~ 94 (142)
.+....+.+|+.+ .|.|.+ .+.|.+.+.|++ ++..+..... .........+....+.|.|.|..
T Consensus 124 ~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~-------- 189 (231)
T 2pet_A 124 NKGTLSVMEDSAQEIATCNSRNGNPAPKITWYR-NGQRLEVPVE-----MNPEGYMTSRTVREASGLLSLTS-------- 189 (231)
T ss_dssp CCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE-TTEECCCCSS-----CCSSEEEEEEEEECTTSCEEEEE--------
T ss_pred CCcceeecCCCceEEEEEEeECcccCCEEEEEE-CCccCccccc-----cccceeecceeEecCCCeEEEEE--------
Confidence 4455566789988 999999 889999999999 8877654320 00112233344456677787742
Q ss_pred EEEEEEeccccceEEEccCCCCCCeEEEEEEecC-----CCCCeeeEEEEEE
Q psy15390 95 FWEIIFHMHYGEQLNITKISRTEMGAYLCIATNN-----VPPSVSKRITVDV 141 (142)
Q Consensus 95 ~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~-----~~~~~s~~~~l~V 141 (142)
.|.|......|+|.|+|.|.|. .+...+..+.|.|
T Consensus 190 ------------~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 190 ------------TLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp ------------EEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred ------------EEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 4777655555699999999994 3322455555554
No 442
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=98.94 E-value=8e-09 Score=60.43 Aligned_cols=38 Identities=16% Similarity=0.320 Sum_probs=29.9
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
++.+.+ .+..+.+.+|++++|.|...+.....+.||+.
T Consensus 4 ~~~v~Q---~p~~~~v~~G~~vtL~C~~s~~~~~~v~WyrQ 41 (128)
T 1nez_G 4 APELRI---FPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQ 41 (128)
T ss_dssp CCEEEE---ESSCEEECTTCCEEEEEEEESCCSSCEEEEEE
T ss_pred CCeeEE---CCCeEEEcCCCCEEEEEEeCccCCCcEEEEEe
Confidence 345555 67778899999999999987655567999984
No 443
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=98.94 E-value=1.4e-07 Score=60.44 Aligned_cols=112 Identities=15% Similarity=0.283 Sum_probs=67.6
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee---c-C----CcceEEee--c---cceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS---I-N----KRKKVHMH--Y---GEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~---~-~----~~~~~~~~--~---~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|...+. ...+.||+.. ++.+. . . ...|+... . ...|.|.+++.+|+|.|
T Consensus 7 ~p~~v~v~~G~sVtL~C~~s~~-~~~v~Wyrq~pg~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sLtI~~lq~~DSG~Y 85 (229)
T 3mbe_C 7 NPPALSLYEGADSGLRCNFSTT-MKSVQWFQQNHRGRLITLFYLAQGTKENGRLKSTFNSKERYSTLHIKDAQLEDSGTY 85 (229)
T ss_dssp ECSEEEEETTCCEEEEEEESSC-CSCEEEEEECSSSCBCCCEEESSEEEEETTEEEEEETTTTEEEEEECSCCSTTCBEE
T ss_pred cCCEEEEEcCCCEEEEEEEeCC-CcEEEEEEECCCCCcEEEEEeCCCCccCCCEEEEECCCCCEEEEEEECCcccCCCCE
Confidence 5667889999999999999876 5679999842 22211 0 0 11222222 1 23699999999999999
Q ss_pred EEEEEecC-CccEEEE----EEEecc---ccceEEEccCCCCCCeEEEEEEecCCC
Q psy15390 83 LCIATKIG-PLKIFWE----IIFHMH---YGEQLNITKISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 83 ~C~~~~~~-~~~~~w~----~~~~~~---~~~~l~i~~~~~~d~g~y~C~a~n~~~ 130 (142)
.|.+.... .....|- ..+... ....+.+.. ..+..+++.|.+.+.+.
T Consensus 86 ~Ca~~~~~~~~~~~fG~GT~L~V~~~~~~p~P~Vf~~~-~~~~~vtl~Cl~~gf~P 140 (229)
T 3mbe_C 86 FCAAEDGGSGNKLIFGTGTLLSVKPNIQNPEPAVYQLK-DPRSQDSTLCLFTDFDS 140 (229)
T ss_dssp EEEEECSSSTTCEEECCCCEEEEECCCSSCCCEEEEEE-CTTCTTCEEEEEESCCS
T ss_pred EEEEEeCCCcccceeCCCEEEEEecccCCCCCEEEEcc-CCCCCEEEEEEccccCC
Confidence 99987532 2234442 222211 111222222 22245799999998764
No 444
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.94 E-value=1.1e-10 Score=73.56 Aligned_cols=69 Identities=17% Similarity=0.288 Sum_probs=49.9
Q ss_pred EEecCCcEEEEEEEecC-CC-CeeEEEecCCcceecCCcceEE------eeccceEEEeecCCCCCeEEEEEEEecCC
Q psy15390 22 AVREEFNITLTCKAEGF-PA-PEIKWRREDNQPISINKRKKVH------MHYGEQLNITKISRTEMGAYLCIATKIGP 91 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~------~~~~~~l~i~~v~~~d~G~y~C~~~~~~~ 91 (142)
.+.+|+.+.|.|.+.+. |. +.+.|++ +|+.+......... ....+.|.|.++..+|+|.|+|.+.|...
T Consensus 124 ~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (212)
T 1nfd_E 124 EELRTNKATLVCLVNDFYPGSATVTWKA-NGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGE 200 (212)
T ss_dssp HHHHTTEECCCEEEEEEBSSCCEEEEEE-TTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTT
T ss_pred HhccCCceEEEEEEEeeECCccEEEEEE-CCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCc
Confidence 34579999999999886 44 6899999 88877543211000 11124588999999999999999998643
No 445
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.94 E-value=2.4e-09 Score=69.82 Aligned_cols=64 Identities=13% Similarity=0.211 Sum_probs=46.7
Q ss_pred EEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEe--eccceEEEeecCCCCCeEEEEEEEec
Q psy15390 22 AVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHM--HYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~--~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
.+.+|++++|.|.+.+.+ +.+.|++ +|..+.......... ..+..|.|.+++ |+|.|.|.+.+.
T Consensus 117 ~V~~G~~vtL~C~~~~~~-~~~~w~k-~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~ 182 (257)
T 1b6u_A 117 TVLAGESVTLSCSSRSSY-DMYHLSR-EGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFR 182 (257)
T ss_dssp TCBTTCEEEEEEECSSCC-SEEEEEE-TTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECS
T ss_pred ccCCCCEEEEEEeCCCCC-cEEEEEE-CCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcC
Confidence 467899999999987654 5899999 777664322111001 124579999998 999999999864
No 446
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.93 E-value=7.9e-10 Score=69.54 Aligned_cols=67 Identities=19% Similarity=0.368 Sum_probs=47.7
Q ss_pred EecCCcEEEEEEEecCC-CC-eeEEEecCCcceecCCcc-eEEeec------cceEEEeecCCCCCeEEEEEEEecC
Q psy15390 23 VREEFNITLTCKAEGFP-AP-EIKWRREDNQPISINKRK-KVHMHY------GEQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~~-~~-~~~w~~~~~~~~~~~~~~-~~~~~~------~~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
+.+|+.++|.|.+.+.+ .+ .+.|++ +|+.+..+... ...... .+.|.|..+...|.|.|+|.+.|.+
T Consensus 127 ~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~ 202 (212)
T 1q0x_L 127 ELSTAKATLVCTITDFYPGVVTVDWKV-DGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEG 202 (212)
T ss_dssp HHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETT
T ss_pred HccCCcEEEEEEEEEEeCCCeEEEEEE-CCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCC
Confidence 34689999999998843 33 799999 88877543210 001111 1358899999999999999999864
No 447
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.93 E-value=1.9e-09 Score=61.43 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=26.2
Q ss_pred CCceeEEecCCcEEEEEEEe-cCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAE-GFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~-~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|... +.+.+.+.|++.
T Consensus 5 ~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq 37 (111)
T 2qhl_A 5 ELHVKTVKRGENVTMECSMSKVKDKDKLAWYRQ 37 (111)
T ss_dssp BCEEEECCTTCCEEECCBCTTCSCGGGEEEEEE
T ss_pred CCceEEEeCCCCEEEEEEccCCcccceEEEEEe
Confidence 45677889999999999987 666667999983
No 448
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.93 E-value=2.2e-07 Score=58.81 Aligned_cols=114 Identities=18% Similarity=0.356 Sum_probs=68.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccc---eec--C-C----cceEEeec-----cceEEEeecCCCCCe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQP---ISI--N-K----RKKVHMHY-----GEQLNITKISRTEMG 80 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~---~~~--~-~----~~~~~~~~-----~~~l~i~~v~~~d~G 80 (142)
.+..+.+.+|++++|.|...+.....+.||+.. ++. +.. . . ..|+.... ...|.|.+++.+|+|
T Consensus 9 ~p~~~~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg 88 (210)
T 2eys_A 9 SPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSA 88 (210)
T ss_dssp ECSEEEEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCE
T ss_pred eCCEEEEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcccCc
Confidence 466788999999999999977666689999842 221 111 1 0 12222221 136999999999999
Q ss_pred EEEEEEEecC--CccEEE----EEEEecc---ccceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 81 AYLCIATKIG--PLKIFW----EIIFHMH---YGEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 81 ~y~C~~~~~~--~~~~~w----~~~~~~~---~~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
.|.|.+.+.. .....| ...+... ..-...+.... +...++.|.+.+.+..
T Consensus 89 ~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~~-~~~~tl~Cl~~gf~P~ 147 (210)
T 2eys_A 89 SYICVVSDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRDS-KSSDKSVCLFTDFDSQ 147 (210)
T ss_dssp EEEEEEESCSSTTCCEEECCCEEEEEECCCSSCCCEEEEECCC-SSSSCEEEEEESCCTT
T ss_pred eEEEEEEccCCCcccceECCCEEEEEECCCCCCCCeEEecCCC-CCCceEEEEcccccCC
Confidence 9999988632 222333 1122211 11122222222 2267999999886543
No 449
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=98.93 E-value=4.4e-08 Score=61.22 Aligned_cols=111 Identities=15% Similarity=0.220 Sum_probs=66.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccc---eec-------CCcceEEee-----ccceEEEeecCCCCCe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQP---ISI-------NKRKKVHMH-----YGEQLNITKISRTEMG 80 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~---~~~-------~~~~~~~~~-----~~~~l~i~~v~~~d~G 80 (142)
.+..+.+.+|++++|.|...+.....+.||+.. ++. +.. ....|+... ....|.|.+++.+|+|
T Consensus 7 ~p~~v~v~~G~~v~L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg 86 (194)
T 1lp9_E 7 TEGLVTLTEGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLSDSA 86 (194)
T ss_dssp CCSEEEEETTSCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGGGCE
T ss_pred cCCEEEEecCCCEEEEEEeCCCCCceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCcccCe
Confidence 567788999999999999887666679999842 221 110 011222222 1237999999999999
Q ss_pred EEEEEEEec-C-CccEEE----EEEEecc---ccceEEEccCCCCCCeEEEEEEecC
Q psy15390 81 AYLCIATKI-G-PLKIFW----EIIFHMH---YGEQLNITKISRTEMGAYLCIATNN 128 (142)
Q Consensus 81 ~y~C~~~~~-~-~~~~~w----~~~~~~~---~~~~l~i~~~~~~d~g~y~C~a~n~ 128 (142)
.|.|.+.+. + .....| ...+... ..-...+.... +...++.|.+.+.
T Consensus 87 ~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~~-~~~~tL~Cl~~gf 142 (194)
T 1lp9_E 87 LYYCALFLASSSFSKLVFGQGTSLSVVPNIQNPEPAVYQLKDP-RSQDSTLCLFTDF 142 (194)
T ss_dssp EEEEEEEECSSSSCEEEECCCEEEEEECCCSSCCCEEEEEECT-TSSSCEEEEEESC
T ss_pred eEEEEEecccCCcceeeeccCceEEecCcCCCCCCeeEecCCC-CCCcEEEEEeecc
Confidence 999998863 1 122223 1122211 11122222222 2367999999884
No 450
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.93 E-value=6.7e-09 Score=59.47 Aligned_cols=31 Identities=29% Similarity=0.617 Sum_probs=25.6
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRR 47 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~ 47 (142)
.+..+.+.+|++++|.|...+. +...+.|++
T Consensus 4 ~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r 35 (115)
T 2atp_B 4 TPSSLLVQTNHTAKMSCEVKSISKLTSIYWLR 35 (115)
T ss_dssp ECSEEEECTTSCEEEEEECCSSCCSSEEEEEE
T ss_pred CCCCEEEcCCCcEEEEEEecCCCCcccEEEEE
Confidence 4667789999999999998764 456799998
No 451
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.93 E-value=2.2e-09 Score=69.67 Aligned_cols=73 Identities=15% Similarity=0.341 Sum_probs=52.4
Q ss_pred CCceeEEecCCcEEEEEEE---ecCCCCeeEEEecCCcceecCC-------------------cceEEe-----eccceE
Q psy15390 17 TPSSVAVREEFNITLTCKA---EGFPAPEIKWRREDNQPISINK-------------------RKKVHM-----HYGEQL 69 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~---~~~~~~~~~w~~~~~~~~~~~~-------------------~~~~~~-----~~~~~l 69 (142)
.+....+.+|+++.|.|.+ .+.|.+.+.|++.++....... ..+... ..+..|
T Consensus 124 ~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 203 (268)
T 3mj6_A 124 EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSI 203 (268)
T ss_dssp CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCE
T ss_pred CCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEE
Confidence 4567788999999999999 5568889999985443211100 011111 234579
Q ss_pred EEeecCCCCCeEEEEEEEec
Q psy15390 70 NITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 70 ~i~~v~~~d~G~y~C~~~~~ 89 (142)
.|.+++..|+|.|+|.+.|.
T Consensus 204 ~i~~v~~~D~G~Y~C~a~n~ 223 (268)
T 3mj6_A 204 KLQTVKESDQGIYTCSIYVG 223 (268)
T ss_dssp EECSCCGGGCEEEEEEEEET
T ss_pred EECcCChhhCeEEEEEEEcC
Confidence 99999999999999999984
No 452
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.92 E-value=5.5e-09 Score=66.86 Aligned_cols=32 Identities=22% Similarity=0.545 Sum_probs=26.0
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
.+....+.+|++++|.|.+.+.| .+.+.|++.
T Consensus 125 ~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 125 QSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 34566788999999999999876 358999993
No 453
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.92 E-value=6.2e-09 Score=61.47 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=24.3
Q ss_pred CceeEEecCCcEEEEEEEecCC---CCeeEEEe
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP---APEIKWRR 47 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~---~~~~~w~~ 47 (142)
+..+.+.+|++|+|.|.....+ ...+.||+
T Consensus 12 ~~~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyr 44 (135)
T 1p4b_L 12 ESALTTSPGETVTLTCRSSTGAVTTSNYASWVQ 44 (135)
T ss_dssp CSEEEECTTCEEEEEEEETTSSCCGGGCCEEEE
T ss_pred CCcEEEcCCCCEEEEEEecCCCcCCCCEEEEEE
Confidence 3348899999999999987654 45799998
No 454
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.92 E-value=1.3e-09 Score=68.81 Aligned_cols=66 Identities=21% Similarity=0.412 Sum_probs=47.4
Q ss_pred ecCCcEEEEEEEec-CCCC-eeEEEecCCcceecCCcceE--Ee------eccceEEEeecCCCCCeEEEEEEEecC
Q psy15390 24 REEFNITLTCKAEG-FPAP-EIKWRREDNQPISINKRKKV--HM------HYGEQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 24 ~~g~~v~l~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~--~~------~~~~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
.+|+.++|.|.+.+ .|.+ .+.|++ +|+.+........ .. ...+.|.|..+...|.|.|+|.+.|.+
T Consensus 127 ~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~ 202 (216)
T 2xzc_L 127 LKSGTASVVCLLNNFYPREAKVQWKV-DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG 202 (216)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEE-TTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTT
T ss_pred ccCCcEEEEEEEEeEcCCceEEEEEE-CCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCC
Confidence 35889999999988 4554 899999 8887654300000 01 111268999999999999999999865
No 455
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.92 E-value=9e-09 Score=58.96 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=24.7
Q ss_pred CceeEEecCCcEEEEEEEecC-CCCeeEEEe
Q psy15390 18 PSSVAVREEFNITLTCKAEGF-PAPEIKWRR 47 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~ 47 (142)
+..+.+.+|++++|.|...+. +...+.||+
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r 38 (115)
T 2otu_A 8 SSSASFSLGASAKLTCTLSSQHSTYTIEWYQ 38 (115)
T ss_dssp CCCEECCTTCCEEEEEEECGGGTTCCEEEEE
T ss_pred CCCEEECCCCCEEEEEEecCCCCCeEEEEEE
Confidence 445678899999999998765 456899998
No 456
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.91 E-value=1e-08 Score=60.46 Aligned_cols=72 Identities=15% Similarity=0.314 Sum_probs=46.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec--CCcceec--CCcceEEee---ccceEEEeecCCCCCeEEEEEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE--DNQPISI--NKRKKVHMH---YGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~--~~~~~~~--~~~~~~~~~---~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
.+..+.+.+|++++|.|...+. ...+.||+. .|+.+.. ....++... ....|.|.+++.+|+|.|.|.+.+.
T Consensus 24 ~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 102 (134)
T 3kg5_A 24 SPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCN 102 (134)
T ss_dssp ECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEEEECT
T ss_pred eCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEEEEEcC
Confidence 5667889999999999998765 467999994 1332210 001111111 1235778888888888888877654
No 457
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.91 E-value=5.5e-08 Score=62.32 Aligned_cols=73 Identities=22% Similarity=0.328 Sum_probs=50.6
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-Ccc---eec-------CCcceEEeec-----cceEEEeecCCCC
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQP---ISI-------NKRKKVHMHY-----GEQLNITKISRTE 78 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~---~~~-------~~~~~~~~~~-----~~~l~i~~v~~~d 78 (142)
.+..+.+.+|++++|.|.+.+.+ ...+.||+.. ++. +.. ....|+.... ...|.|.+++.+|
T Consensus 7 ~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 86 (229)
T 1hxm_A 7 EHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERD 86 (229)
T ss_dssp SCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGG
T ss_pred CCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhH
Confidence 56778899999999999987543 3579999842 221 110 1122333221 1379999999999
Q ss_pred CeEEEEEEEec
Q psy15390 79 MGAYLCIATKI 89 (142)
Q Consensus 79 ~G~y~C~~~~~ 89 (142)
+|.|.|.+.+.
T Consensus 87 sg~Y~C~~~~~ 97 (229)
T 1hxm_A 87 EGSYYCACDTL 97 (229)
T ss_dssp CEEEEEEEECC
T ss_pred CeEEEEEEecC
Confidence 99999999875
No 458
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.90 E-value=3.1e-09 Score=58.73 Aligned_cols=24 Identities=13% Similarity=0.129 Sum_probs=16.0
Q ss_pred cCCCCCeEEEEEEEecCCccEEEEE
Q psy15390 74 ISRTEMGAYLCIATKIGPLKIFWEI 98 (142)
Q Consensus 74 v~~~d~G~y~C~~~~~~~~~~~w~~ 98 (142)
+...+.-...|.+...+ +.+.|.+
T Consensus 21 v~~G~~v~l~C~~~g~p-p~i~W~k 44 (95)
T 2ckn_A 21 VHPGDLLQLRCRLRDDV-QSINWLR 44 (95)
T ss_dssp ECTTSCEEEECCEESSC-CEEEEEB
T ss_pred EcCCCeEEEEEECCCCC-CceEEEE
Confidence 34456666778777655 6788875
No 459
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.89 E-value=2.7e-08 Score=57.16 Aligned_cols=32 Identities=28% Similarity=0.522 Sum_probs=26.0
Q ss_pred CCceeEEecCCcEEEEEEEecCC-CCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP-APEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~-~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|...... ...+.||+.
T Consensus 5 ~p~~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq 37 (117)
T 3bp6_A 5 YPAWLTVSEGANATFTCSLSNWSEDLMLNWNRL 37 (117)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEEE
T ss_pred cCCcEEEeCCCCEEEEeEeecCCCCCEEEEEEe
Confidence 46678899999999999987643 457999983
No 460
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.89 E-value=8e-09 Score=59.17 Aligned_cols=31 Identities=13% Similarity=0.157 Sum_probs=25.0
Q ss_pred CCceeEEecCCcEEEEEEEecCC-CCeeEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP-APEIKWRR 47 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~-~~~~~w~~ 47 (142)
.+..+.+.+|++++|.|...... ...+.||+
T Consensus 6 ~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyr 37 (114)
T 2hp4_A 6 SPLDRTWNLGETVELKCQVLLSNPTSGASWLF 37 (114)
T ss_dssp ECCSCCCCTTCCEEEEEEECCSSCCSCEEEEE
T ss_pred CCCEEEEcCCCCEEEEEEeecCCCCceEEEEE
Confidence 56667788999999999987543 55799998
No 461
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.89 E-value=5.8e-09 Score=65.53 Aligned_cols=61 Identities=13% Similarity=0.212 Sum_probs=47.8
Q ss_pred EecCCcEEEEEEEecC----CCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 23 VREEFNITLTCKAEGF----PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~----~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
+.+|+.++|.|.+.+. |.+.+.|++ ++...... .....+.|.|..+...|.|.|+|.+.|.
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~-~~~~~~~~-----~~~~~~~L~i~~~~~~~~g~Y~C~a~n~ 199 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTG-NALSPLDP-----ETTRSSELTLTPRPEDHGTNLTCQMKRQ 199 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEES-STTSSSCS-----SCCCSSEEEECCCTTCCSCEEEEEEECC
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeC-CCCccCCC-----CceeEEEEEEecccHHcCcEEEEEEEeC
Confidence 5689999999999764 778999999 66543211 1234567999999999999999999985
No 462
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.88 E-value=2.2e-09 Score=61.67 Aligned_cols=66 Identities=23% Similarity=0.332 Sum_probs=49.7
Q ss_pred CCCCCeEEEEEEEecCCccEEEEEEEec------------cccc--eEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEE
Q psy15390 75 SRTEMGAYLCIATKIGPLKIFWEIIFHM------------HYGE--QLNITKISRTEMGAYLCIATNNVPPSVSKRITVD 140 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~~~~~~~w~~~~~~------------~~~~--~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~ 140 (142)
...+.-...|.+...+.+.+.|.+.... ...+ .|.|.+++.+|+|.|+|.|.|..|. .+..+.|.
T Consensus 28 ~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~ 106 (116)
T 2kkq_A 28 LEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGV-TTCNTRLD 106 (116)
T ss_dssp ETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEE-EEEEEEEE
T ss_pred eCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCe-EEEEEEEE
Confidence 3445556889998888889999753111 1111 7999999999999999999999986 67777777
Q ss_pred E
Q psy15390 141 V 141 (142)
Q Consensus 141 V 141 (142)
|
T Consensus 107 V 107 (116)
T 2kkq_A 107 V 107 (116)
T ss_dssp E
T ss_pred E
Confidence 6
No 463
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.88 E-value=2.1e-08 Score=64.47 Aligned_cols=29 Identities=14% Similarity=0.465 Sum_probs=23.9
Q ss_pred eeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 20 SVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
...+.+|++++|.|.+.+.+ .+.+.|++.
T Consensus 136 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 136 PELKKPGETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ceeecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence 34588999999999998864 468999983
No 464
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.88 E-value=1.1e-08 Score=55.36 Aligned_cols=63 Identities=17% Similarity=0.145 Sum_probs=45.0
Q ss_pred cCCCCCeEEEEEEEecCCccEEEEEEE------------eccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 74 ISRTEMGAYLCIATKIGPLKIFWEIIF------------HMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 74 v~~~d~G~y~C~~~~~~~~~~~w~~~~------------~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
+...+.-.+.|.+.. +.+.+.|.+.. .......|.|.++..+|+|.|+|.|.|. +..+.|.|
T Consensus 8 ~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~-----~~~a~l~V 81 (84)
T 2lu7_A 8 STPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD-----SRIFLVSV 81 (84)
T ss_dssp ECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT-----CEEEEEEE
T ss_pred EecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE-----EEEEEEEE
Confidence 455667788998855 77889997521 1112347999999999999999999653 44566666
Q ss_pred C
Q psy15390 142 E 142 (142)
Q Consensus 142 ~ 142 (142)
+
T Consensus 82 ~ 82 (84)
T 2lu7_A 82 E 82 (84)
T ss_dssp C
T ss_pred E
Confidence 4
No 465
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.87 E-value=2e-09 Score=68.26 Aligned_cols=72 Identities=13% Similarity=0.361 Sum_probs=47.0
Q ss_pred EecCCcEEEEEEEecC-CCC-eeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCccEEEEEEE
Q psy15390 23 VREEFNITLTCKAEGF-PAP-EIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLKIFWEIIF 100 (142)
Q Consensus 23 ~~~g~~v~l~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~~~w~~~~ 100 (142)
+.+|+.++|.|.+.+. |.+ .+.|++ +|..+..... . .+ . +.|.|.-
T Consensus 139 ~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~~~~~~~-~---------~~---~--~~~~~~~---------------- 186 (222)
T 1q9r_B 139 AQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLSSGVHTF-P---------AV---L--QSDLYTL---------------- 186 (222)
T ss_dssp CCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBCTTEEEE-E---------EE---E--ETTEEEE----------------
T ss_pred ccCCCcEEEEEEEccEECCCCEEEEec-CCeEcceEec-c---------cc---c--cCCcEEE----------------
Confidence 4579999999999885 877 999999 7765421100 0 00 0 1223322
Q ss_pred eccccceEEEccCCCCCCeEEEEEEecCCCC
Q psy15390 101 HMHYGEQLNITKISRTEMGAYLCIATNNVPP 131 (142)
Q Consensus 101 ~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~ 131 (142)
.+.|.|..+...| |.|+|.|.|..+.
T Consensus 187 ----~s~L~i~~~~~~d-g~y~C~a~n~~~~ 212 (222)
T 1q9r_B 187 ----SSSVTVPSSTWPS-ETVTCNVAHPASS 212 (222)
T ss_dssp ----EEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred ----EEEEEECchhcCC-CeEEEEEEccCCC
Confidence 1247777777778 8888888887765
No 466
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=98.87 E-value=1.4e-07 Score=54.29 Aligned_cols=31 Identities=13% Similarity=0.444 Sum_probs=24.2
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
+..+.+.+|++++|.|...+.. ...+.||+.
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq 39 (120)
T 1n4x_H 7 SGPELKKPGETVKISCKATNYAFTDYSMHWVKQ 39 (120)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCCEEEcCCCeEEEEEEecCcccCCcEEEEEEE
Confidence 4457889999999999987533 457999983
No 467
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=98.87 E-value=2.6e-08 Score=57.92 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=26.4
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|.........+.||+.
T Consensus 11 ~p~~~~v~~G~~vtL~C~~~~~~~~~v~Wyrq 42 (125)
T 3r8b_B 11 SPRNKVAVTGEKVTLSCKQTNSYFNNMYWYRQ 42 (125)
T ss_dssp ECSEEEEETTCCEEEEEEEESCCCSEEEEEEE
T ss_pred cCCeEEEcCCCcEEEEEEECCCCCCeEEEEEE
Confidence 56778899999999999987665557999983
No 468
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.87 E-value=9.9e-10 Score=70.98 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=48.0
Q ss_pred ecCCcEEEEEEEec-CCC-CeeEEEecCCcceecCCcceEE--------eeccceEEEeecCCCCCeEEEEEEEecCC
Q psy15390 24 REEFNITLTCKAEG-FPA-PEIKWRREDNQPISINKRKKVH--------MHYGEQLNITKISRTEMGAYLCIATKIGP 91 (142)
Q Consensus 24 ~~g~~v~l~C~~~~-~~~-~~~~w~~~~~~~~~~~~~~~~~--------~~~~~~l~i~~v~~~d~G~y~C~~~~~~~ 91 (142)
.+|+.++|.|.+.+ .|. ..+.|++ +|..+......... ....+.|.|.++...|+|.|+|.+.|.+.
T Consensus 167 ~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 243 (254)
T 2c1o_A 167 LTSGGASVVCFLNNFYPKDINVKWKI-DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 243 (254)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEE-SSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred ccCCcEEEEEEEecccCCCcEEEEEE-CCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCC
Confidence 35889999999987 444 3599999 88876544101100 01134699999999999999999998754
No 469
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.87 E-value=1e-08 Score=63.89 Aligned_cols=66 Identities=15% Similarity=0.327 Sum_probs=46.6
Q ss_pred ecCCcEEEEEEEe-cCCCCeeEEEecCCcceecCCcceEEeecc-ceE---EEeecCCCCCeEEEEEEEecCC
Q psy15390 24 REEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVHMHYG-EQL---NITKISRTEMGAYLCIATKIGP 91 (142)
Q Consensus 24 ~~g~~v~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l---~i~~v~~~d~G~y~C~~~~~~~ 91 (142)
..|+.+.|.|.+. +.|.|.+.|++ +|..+..... +...... +.+ .+..++..|.|.|+|.+.|...
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k-~g~~l~~~~~-~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~ 189 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLE-NGEELNAINT-TVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHL 189 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEE-SSCEECCSEE-EEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTC
T ss_pred CCCCeEEEEEecCCccCCCEEEEEE-CCEECccccc-eEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcc
Confidence 4588999999995 88999999999 8887764322 2222222 222 3355677899999999998643
No 470
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.86 E-value=8.7e-10 Score=69.29 Aligned_cols=45 Identities=24% Similarity=0.477 Sum_probs=31.0
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecC--CCCeeEEEecCCcceec
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGF--PAPEIKWRREDNQPISI 55 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~~~~~~~ 55 (142)
.+|.+.. .+....+.+|+.++|.|.+.+. +.+.+.|++ +|..+..
T Consensus 110 ~~P~v~~---~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 156 (211)
T 3tv3_L 110 AAPSVTL---FPPSSEELQANKATLVCLISDFYPGAVTVAWKA-DSSPVKA 156 (211)
T ss_dssp BCCEEEE---ECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEE-TTEEECT
T ss_pred cCCeeEe---cCCchhhhcCCCeEEEEEeeeecCCCeEEEEEE-CCeecCC
Confidence 4555544 2333333479999999999884 356899999 8887643
No 471
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.86 E-value=5e-09 Score=64.38 Aligned_cols=56 Identities=20% Similarity=0.151 Sum_probs=44.7
Q ss_pred ecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecC
Q psy15390 24 REEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 24 ~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
..+.++.|.|.+.+.|.+.+.|++ +++.+.... .+.|.++...|+|.|+|.+.|..
T Consensus 108 ~~~~~v~L~C~~~g~p~p~i~W~~-~g~~l~~~~----------~~~i~~~~~~d~G~Y~C~a~N~~ 163 (176)
T 1hng_A 108 WECSNATLTCEVLEGTDVELKLYQ-GKEHLRSLR----------QKTMSYQWTNLRAPFKCKAVNRV 163 (176)
T ss_dssp EETTTTEEEEECSSCSSCEEEEEE-TTEEEEEES----------SSEEEEECSCCSSCEEEEEEETT
T ss_pred ecCCcEEEEEEecCCCCcEEEEEE-CCEECCCCC----------cEEEEEEEccCCeEEEEEEEecC
Confidence 346679999999999999999999 887764321 24566888999999999999853
No 472
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.86 E-value=1.9e-08 Score=57.75 Aligned_cols=31 Identities=23% Similarity=0.519 Sum_probs=24.2
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
+..+.+.+|++++|.|...+.. ...+.||+.
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq 39 (117)
T 2yc1_A 7 SGGGLVQPGGSLRLSCTGSGFTFDNYAMHWLRQ 39 (117)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCCEEEcCCCeEEEEEEecCcccCCCeEEEEEE
Confidence 3456789999999999987533 457999983
No 473
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=98.86 E-value=1.1e-08 Score=57.49 Aligned_cols=40 Identities=13% Similarity=0.239 Sum_probs=27.2
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCC----CeeEEEecCCcce
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPA----PEIKWRREDNQPI 53 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~----~~~~w~~~~~~~~ 53 (142)
.+|.+.. .+. ..+..|++|+|.| .. ... ..+.|++ +|...
T Consensus 8 pkPsL~a---~p~-~~v~~G~~VTL~C-~~-~~~~~~~~~f~l~k-~g~~~ 51 (102)
T 4esk_A 8 PDITIFP---NSS-LMISQGTFVTVVC-SY-SDKHDLYNMVRLEK-DGSTF 51 (102)
T ss_dssp CEEEEEC---CSE-EEEETTCCEEEEE-EC-TTTGGGCCEEEEEE-TTEEE
T ss_pred CCCEEEE---eCC-CcccCCCcEEEEE-CC-CcCCCcccEEEEEE-CCccc
Confidence 4566655 444 3677899999999 64 334 4788888 77543
No 474
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=98.86 E-value=2.8e-08 Score=57.42 Aligned_cols=31 Identities=23% Similarity=0.563 Sum_probs=24.4
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
+..+.+.+|++++|.|...+.+ ...+.||+.
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq 39 (121)
T 1j05_H 7 SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 39 (121)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CCCEEEeCCCcEEEEEEecCcccCCcEEEEEEE
Confidence 4456889999999999987543 457999983
No 475
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.86 E-value=1.5e-07 Score=62.33 Aligned_cols=70 Identities=20% Similarity=0.336 Sum_probs=52.7
Q ss_pred CCceeEEecCCcEEEEEEEec-------CCCCeeEEEecCCcceecCCcceEEeec-cceEEEeecCCCCCeEEEEEEEe
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-------FPAPEIKWRREDNQPISINKRKKVHMHY-GEQLNITKISRTEMGAYLCIATK 88 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-------~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~y~C~~~~ 88 (142)
.|+...+..|++++|.|.+.+ .|.+.+.|++ +|..+... +.+. ... .+.|.|.++...| |.|.|.+.+
T Consensus 10 ~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~-~g~~i~~~-~~~~-~~~~~~~L~i~~~~~~~-g~Y~C~a~~ 85 (303)
T 1i1r_A 10 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKT-NHFTIPKE-QYTI-INRTASSVTFTDIASLN-IQLTCNILT 85 (303)
T ss_dssp ESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEE-TTEECCGG-GCEE-EETTEEEEEECSCCCSE-EEEEEEEEE
T ss_pred ccCCceEeCCCCEEEEEEECCccccccCCChhheEEEE-CCEECChh-heee-eCCcEEEEEEcCcCCCc-eEEEEeccc
Confidence 355677889999999999985 3677999999 88877543 2221 222 2479999999884 999999987
Q ss_pred cC
Q psy15390 89 IG 90 (142)
Q Consensus 89 ~~ 90 (142)
.+
T Consensus 86 ~g 87 (303)
T 1i1r_A 86 FG 87 (303)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 476
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=98.85 E-value=1.3e-07 Score=54.94 Aligned_cols=31 Identities=19% Similarity=0.393 Sum_probs=24.2
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
+..+.+.+|++++|.|...+.+ ...+.||+.
T Consensus 7 p~~~~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq 39 (124)
T 1yc7_A 7 SGGGSVQAGGSLRLSCAVSGSTYSPCTTGWYRQ 39 (124)
T ss_dssp ECCEEECTTCCEEEEEEEESCCSSCEEEEEEEE
T ss_pred CCCEEEecCCCEEEEEEEeCCCcCCCEEEEEEE
Confidence 4467889999999999997533 446999983
No 477
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.85 E-value=9.1e-09 Score=66.16 Aligned_cols=29 Identities=21% Similarity=0.286 Sum_probs=23.9
Q ss_pred eeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 20 SVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 20 ~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
...+.+|++++|.|.+.+.+ .+.+.|++.
T Consensus 131 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 131 PSLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred cceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 34688999999999998765 468999983
No 478
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=98.85 E-value=2.8e-07 Score=53.02 Aligned_cols=31 Identities=29% Similarity=0.515 Sum_probs=24.3
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
+..+.+.+|++++|.|...+.. ...+.||+.
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq 39 (120)
T 3b9v_A 7 SGGGLVQPGGSLRLSCAASGFNIKDTYIGWVRR 39 (120)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CCCEEEeCCccEEEEEEeeCccccccEEEEEEE
Confidence 3457789999999999987533 457999983
No 479
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=98.85 E-value=2.1e-07 Score=53.61 Aligned_cols=30 Identities=23% Similarity=0.605 Sum_probs=23.9
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEe
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRR 47 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~ 47 (142)
+..+.+.+|++++|.|...+.. ...+.||+
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~Wyr 38 (120)
T 1mfa_H 7 SGTVVARPGASVKMSCKASGYTFTNYWMHWIK 38 (120)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEE
T ss_pred CCCEEEeCCCCEEEEEEeeCccccccEEEEEE
Confidence 4456789999999999987532 45799998
No 480
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=98.84 E-value=1.4e-07 Score=59.33 Aligned_cols=73 Identities=21% Similarity=0.394 Sum_probs=50.5
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccc---ee-c------CCcceEEee-----ccceEEEeecCCCCCe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQP---IS-I------NKRKKVHMH-----YGEQLNITKISRTEMG 80 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~---~~-~------~~~~~~~~~-----~~~~l~i~~v~~~d~G 80 (142)
.+..+.+.+|++++|.|...+.....+.||+.. ++. +. . ....|+... ....|.|.+++.+|+|
T Consensus 6 ~p~~v~v~~G~~v~L~C~~s~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg 85 (203)
T 2bnu_A 6 IPAALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGDSA 85 (203)
T ss_dssp ECSEEEEETTCCEEEEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCE
T ss_pred cCCEEEEeCCCCEEEEEEECCCCcceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCcccCe
Confidence 467788999999999999876555579999842 221 11 0 011222222 1236999999999999
Q ss_pred EEEEEEEec
Q psy15390 81 AYLCIATKI 89 (142)
Q Consensus 81 ~y~C~~~~~ 89 (142)
.|.|.+.+.
T Consensus 86 ~Y~C~~~~~ 94 (203)
T 2bnu_A 86 TYLCAVRPT 94 (203)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEcC
Confidence 999999863
No 481
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=98.84 E-value=2.6e-08 Score=57.59 Aligned_cols=31 Identities=23% Similarity=0.404 Sum_probs=24.4
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
+..+.+.+|++++|.|...+.+ ...+.||+.
T Consensus 9 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq 41 (121)
T 2xt1_B 9 SGGGLVQAGGSLRLSCAASGSFFMSNVMAWYRQ 41 (121)
T ss_dssp ECCEEEETTCCEEEEEEEESSSCCCSEEEEEEE
T ss_pred CCCEEEeCCCCEEEEEEecCeeccCceEEEEEE
Confidence 3457889999999999997533 457999983
No 482
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.84 E-value=3e-09 Score=66.77 Aligned_cols=68 Identities=13% Similarity=0.120 Sum_probs=46.8
Q ss_pred eEEecCCcEEEEEEEecC-CC--CeeEEEecCCcceecCCcceE-----EeeccceEEEeecCCCCCeEEEEEEEec
Q psy15390 21 VAVREEFNITLTCKAEGF-PA--PEIKWRREDNQPISINKRKKV-----HMHYGEQLNITKISRTEMGAYLCIATKI 89 (142)
Q Consensus 21 ~~~~~g~~v~l~C~~~~~-~~--~~~~w~~~~~~~~~~~~~~~~-----~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 89 (142)
..+.+|+.++|.|.+.+. |. +.+.|++ ++..+........ .......|.|..+...|.|.|+|.+.|.
T Consensus 101 ~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k-~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~ 176 (202)
T 1vca_A 101 GPLEAGKPITVKCSVADVYPFDRLEIDLLK-GDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLH 176 (202)
T ss_dssp SCEETTSCEEEEEEEEEEBSGGGEEEEEEE-TTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEEC
T ss_pred eEEcCCCCEEEEEEECCcCCCCCeEEEEEe-CCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEcc
Confidence 457899999999999875 33 3689999 8877643210000 0111234678888888899999999985
No 483
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.84 E-value=2.2e-08 Score=57.37 Aligned_cols=30 Identities=23% Similarity=0.575 Sum_probs=23.7
Q ss_pred ceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 19 SSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 19 ~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
..+.+.+|++++|.|...+.+ ...+.||+.
T Consensus 8 ~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq 39 (116)
T 1a2y_B 8 GPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQ 39 (116)
T ss_dssp CCSEECTTSCEEEEEEEESSCTTSSEEEEEEE
T ss_pred CCEEEeCCCcEEEEEEEcCCCcCCcEEEEEEe
Confidence 346789999999999997643 357999983
No 484
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.83 E-value=1.5e-08 Score=64.74 Aligned_cols=72 Identities=19% Similarity=0.298 Sum_probs=50.8
Q ss_pred CCceeEEecCCcEEEEEEEecC--CCCeeEEEecC-Ccc---eec----------C-CcceEEeec-----cceEEEeec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF--PAPEIKWRRED-NQP---ISI----------N-KRKKVHMHY-----GEQLNITKI 74 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~--~~~~~~w~~~~-~~~---~~~----------~-~~~~~~~~~-----~~~l~i~~v 74 (142)
.+..+.+.+|++++|.|.+.+. +.+.+.||+.. +.. +.. + ...++.... ...|.|.++
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (230)
T 1ypz_F 7 PEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSL 86 (230)
T ss_dssp SCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSC
T ss_pred cCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcC
Confidence 5677889999999999998764 45689999842 221 100 0 123333332 137999999
Q ss_pred CCCCCeEEEEEEEe
Q psy15390 75 SRTEMGAYLCIATK 88 (142)
Q Consensus 75 ~~~d~G~y~C~~~~ 88 (142)
+.+|+|.|.|.+.+
T Consensus 87 ~~~D~G~Y~C~~~~ 100 (230)
T 1ypz_F 87 EEEDEAIYYCSYGE 100 (230)
T ss_dssp CGGGCSEEEEEECC
T ss_pred ChhhCEEEEEEEEC
Confidence 99999999999875
No 485
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=2.4e-09 Score=61.54 Aligned_cols=65 Identities=20% Similarity=0.209 Sum_probs=49.3
Q ss_pred CCCCeEEEEEEEecCCccEEEEEEE----------eccccceEEEccCCCCCCeEEEEEEecCCCCCeeeEEEEEE
Q psy15390 76 RTEMGAYLCIATKIGPLKIFWEIIF----------HMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141 (142)
Q Consensus 76 ~~d~G~y~C~~~~~~~~~~~w~~~~----------~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~s~~~~l~V 141 (142)
..+.-...|.+...+.+.+.|.+.. .....+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 22 ~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V 96 (118)
T 2eo9_A 22 VDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGE-ATWSAYIEV 96 (118)
T ss_dssp TTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSCE-EEEECCEEE
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCc-EEEEEEEEE
Confidence 3455567898887788899998632 1123567999999999999999999999886 555566655
No 486
>1dqt_A CTLA4, cytotoxic T lymphocyte associated antigen 4; immunoglobulin variable domain-like beta-sandwich, homodimer, immune system; 2.00A {Mus musculus} SCOP: b.1.1.1
Probab=98.83 E-value=5.5e-08 Score=55.79 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=25.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCCC---eeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAP---EIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~---~~~w~~~ 48 (142)
.+..+.+.+|++++|.|...+.... .+.||+.
T Consensus 5 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq 39 (117)
T 1dqt_A 5 QPSVVLASSHGVASFPCEYSPSHNTDEVRVTVLRQ 39 (117)
T ss_dssp CCSEEECCTTSCEEEEEEEESCCTTCEEEEEEEEE
T ss_pred CCceEEEeCCCeEEEEEEeeCCCCCCccEEEEEec
Confidence 4566788999999999998744433 6899984
No 487
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=98.83 E-value=1.4e-08 Score=58.54 Aligned_cols=73 Identities=16% Similarity=0.288 Sum_probs=46.4
Q ss_pred CCCeeeecCCCCceeEEecCCcEEEEEEEecCCC----CeeEEEecCCcceecCCcceEEeeccceEEEeecCCCCCeEE
Q psy15390 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPA----PEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAY 82 (142)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y 82 (142)
-+|.+.. .+. ..+..|++|+|.| .. ... ..+.|++ +|...... ..........+.|.+++..|+|.|
T Consensus 8 pkPsL~a---~P~-~vV~~G~~VTL~C-~~-~~~~~~~~~f~L~k-~g~~~~~~--~~~~~~~~a~f~i~~vt~~daG~Y 78 (118)
T 4ety_A 8 PDITIFP---NSS-LMISQGTFVTVVC-SY-SDKHDLYNMVRLEK-DGSTFMEK--STEPYKTEDEFEIGPVNETITGHY 78 (118)
T ss_dssp CEEEEEC---CSE-EEEETTCCEEEEE-EC-TTTGGGCCEEEEEE-TTEEEEEE--ECCSSSSEEEEEECSCCGGGCEEE
T ss_pred CCCEEEE---eCC-CcccCCCcEEEEE-CC-CCCCcccCEEEEEE-CCcCcccc--ccCCCCcceEEEeCccCccCCeEE
Confidence 4566655 444 4677899999999 54 334 4688988 77654310 000011234688888888888888
Q ss_pred EEEEEe
Q psy15390 83 LCIATK 88 (142)
Q Consensus 83 ~C~~~~ 88 (142)
.|...+
T Consensus 79 ~C~y~~ 84 (118)
T 4ety_A 79 SCIYSK 84 (118)
T ss_dssp EEEEEC
T ss_pred EEEeeC
Confidence 887654
No 488
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=98.83 E-value=1.7e-07 Score=58.88 Aligned_cols=110 Identities=12% Similarity=0.178 Sum_probs=66.0
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Ccc---eec-C------CcceEEeec-----cceEEEeecCCCCCe
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQP---ISI-N------KRKKVHMHY-----GEQLNITKISRTEMG 80 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~---~~~-~------~~~~~~~~~-----~~~l~i~~v~~~d~G 80 (142)
.+..+.+.+|++++|.|.........+.||+.. |+. +.. . ...|+.... ...|.|.+++.+|+|
T Consensus 6 ~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG 85 (200)
T 3rgv_A 6 MQGQVTLSENDFLFINCTYSTTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQEIDSA 85 (200)
T ss_dssp CCSEEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCE
T ss_pred CCCEEEEeCCCCEEEEEEecCCCCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcCccCC
Confidence 567788999999999999987555679999841 221 110 0 112222221 236999999999999
Q ss_pred EEEEEEEecCCccEEE----EEEEecc---c-cceEEEccCCCCCCeEEEEEEecCCC
Q psy15390 81 AYLCIATKIGPLKIFW----EIIFHMH---Y-GEQLNITKISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 81 ~y~C~~~~~~~~~~~w----~~~~~~~---~-~~~l~i~~~~~~d~g~y~C~a~n~~~ 130 (142)
.|.|.+.... ...| ...+... . ...+.+.... ..+++.|.+.+.+.
T Consensus 86 ~Y~Ca~~~~~--~~~fG~GT~L~V~~~~~~~~P~V~~~~~~~--~~~tl~Cl~~gf~P 139 (200)
T 3rgv_A 86 VYYCAANSGT--YQRFGTGTKLQVVPNIQNPDPAVYQLRDSK--SSDKSVCLFTDFDS 139 (200)
T ss_dssp EEEEEEESSS--CCCCCCCEEEEEECCCSSCCCEEEEEEESS--SSSCEEEEEESCCT
T ss_pred CEEEEeccCc--ccccCcCEEEEEeCCCCCCCCeEEEccCCC--CCceEEEEcccccC
Confidence 9999986421 1122 1112211 1 1122222222 34689999998664
No 489
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.83 E-value=1.2e-07 Score=67.43 Aligned_cols=126 Identities=14% Similarity=0.125 Sum_probs=71.8
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecCCC--CeeEEEecCCcceecCC-cceEEeec------cceEEEeecCCCC
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPA--PEIKWRREDNQPISINK-RKKVHMHY------GEQLNITKISRTE 78 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~--~~~~w~~~~~~~~~~~~-~~~~~~~~------~~~l~i~~v~~~d 78 (142)
+|.+... .+....+.+|+.++|.|.+.+..+ ..+.|++ +|+.+.... ........ .+.|.|..+...|
T Consensus 296 ~p~v~~~--~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k-~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d 372 (512)
T 1zvo_C 296 PLGVYLL--TPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEV-AGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNA 372 (512)
T ss_pred CCEEEEE--CCChHHhccCCceEEEEEEeceECCCeEEEEEE-CCEeccCceeccceecCCCCeEEEEEEEEEchHHhcC
Confidence 4554331 333344668999999999988533 3899999 777654111 11111111 2358899889999
Q ss_pred CeEEEEEEEecCCcc--EEEEEEEec--cccceEEEc-cCCCCCCeE-EEEEEecCCCC--CeeeE
Q psy15390 79 MGAYLCIATKIGPLK--IFWEIIFHM--HYGEQLNIT-KISRTEMGA-YLCIATNNVPP--SVSKR 136 (142)
Q Consensus 79 ~G~y~C~~~~~~~~~--~~w~~~~~~--~~~~~l~i~-~~~~~d~g~-y~C~a~n~~~~--~~s~~ 136 (142)
.|.|+|.+.|..... ..+.+.... .......+. ....++... +.|.|.+...+ .+.|.
T Consensus 373 ~g~y~C~a~n~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~ 438 (512)
T 1zvo_C 373 GTSVTCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWL 438 (512)
T ss_pred CCeEEEEEEeCCCCCCceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEE
Confidence 999999999865432 223221111 011112221 122455567 99999975433 34553
No 490
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.82 E-value=2.9e-08 Score=57.33 Aligned_cols=31 Identities=23% Similarity=0.448 Sum_probs=24.2
Q ss_pred CceeEEecCCcEEEEEEEecCC--CCeeEEEec
Q psy15390 18 PSSVAVREEFNITLTCKAEGFP--APEIKWRRE 48 (142)
Q Consensus 18 ~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~ 48 (142)
+..+.+.+|++++|.|...+.+ ...+.||+.
T Consensus 7 ~~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq 39 (121)
T 1kxv_C 7 SGGGTVPAGGSLRLSCAASGNTLCTYDMSWYRR 39 (121)
T ss_dssp ECCEEECTTCCEEEEEEEESCTTCCEEEEEEEE
T ss_pred CCCEEEcCCCcEEEEEEecCCCcCceEEEEEEe
Confidence 3457889999999999987543 457999983
No 491
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.82 E-value=4.9e-08 Score=57.43 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=46.3
Q ss_pred CCCCCeEEEEEEEecCCccEEEEEEEecc-------------------------ccceEEEccCCCCCCeEEEEEEecCC
Q psy15390 75 SRTEMGAYLCIATKIGPLKIFWEIIFHMH-------------------------YGEQLNITKISRTEMGAYLCIATNNV 129 (142)
Q Consensus 75 ~~~d~G~y~C~~~~~~~~~~~w~~~~~~~-------------------------~~~~l~i~~~~~~d~g~y~C~a~n~~ 129 (142)
...+.....|.+...+.+.+.|.+..... ....|.|.+++.+|+|.|+|.|.|..
T Consensus 34 ~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 113 (137)
T 3qr2_A 34 WVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDP 113 (137)
T ss_dssp ETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEEECCT
T ss_pred eCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEEEecC
Confidence 34666778999998889999998754321 24579999999999999999999998
Q ss_pred CC
Q psy15390 130 PP 131 (142)
Q Consensus 130 ~~ 131 (142)
|.
T Consensus 114 G~ 115 (137)
T 3qr2_A 114 DR 115 (137)
T ss_dssp TS
T ss_pred Cc
Confidence 76
No 492
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.82 E-value=2e-08 Score=66.04 Aligned_cols=73 Identities=19% Similarity=0.329 Sum_probs=47.2
Q ss_pred CCceeEEecCCcEEEEEEEec-CC-CCeeEEEec-CCcceec----------CCcceEEeec---cceEEEeecCCCCCe
Q psy15390 17 TPSSVAVREEFNITLTCKAEG-FP-APEIKWRRE-DNQPISI----------NKRKKVHMHY---GEQLNITKISRTEMG 80 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~-~~-~~~~~w~~~-~~~~~~~----------~~~~~~~~~~---~~~l~i~~v~~~d~G 80 (142)
.+. ..+.+|++++|.|.+.+ .+ .+.+.|++. .+..+.. ....++.... ...|.|.+++.+|+|
T Consensus 146 ~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 224 (280)
T 3fku_X 146 PPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEA 224 (280)
T ss_dssp CSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCS
T ss_pred CCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCE
Confidence 344 78899999999999987 43 368999873 2222210 0011111111 124888999999999
Q ss_pred EEEEEEEecC
Q psy15390 81 AYLCIATKIG 90 (142)
Q Consensus 81 ~y~C~~~~~~ 90 (142)
.|.|.+.+..
T Consensus 225 ~Y~C~~~~~~ 234 (280)
T 3fku_X 225 DYYCSTWDSS 234 (280)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEecCC
Confidence 9999887754
No 493
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.82 E-value=1.8e-08 Score=65.38 Aligned_cols=37 Identities=24% Similarity=0.286 Sum_probs=29.4
Q ss_pred CCeeeecCCCCceeEEecCCcEEEEEEEecC-CCCeeEEEe
Q psy15390 8 PPNILDTESTPSSVAVREEFNITLTCKAEGF-PAPEIKWRR 47 (142)
Q Consensus 8 ~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~ 47 (142)
+|.+.. .+..+.+.+|++++|.|.+.+. +.+.+.|++
T Consensus 136 ~~~v~~---~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 173 (259)
T 3omz_A 136 AQKVTQ---AQSSVSMPVRKAVTLNCLYETSWWSYYIFWYK 173 (259)
T ss_dssp -CEEEC---CCCCEEEETTCCEEECCEEECCCSSCEEEEEE
T ss_pred CeeeEE---eCCEEEEcCCCCEEEEEECCCccCCceEEEee
Confidence 345555 6677889999999999998774 677899998
No 494
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=98.81 E-value=6.3e-08 Score=55.33 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=56.6
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-CcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCcc
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLK 93 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~ 93 (142)
.+..+.+.+|++++|.|...+.. ...+.|++.. +..+ ...... ..... ...... . ..
T Consensus 5 ~p~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~------~~l~~~------~~~~~-~~~~~~-----~--~R 64 (114)
T 1u9k_A 5 EEERYDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEP------LTLVVT------QRPFT-RPSEVH-----M--GK 64 (114)
T ss_dssp CCEEEEECTTCCEEEEEECCHHHHTTSEEEEEECCTTSCC------EEEEEC------CSSTT-SCEEEE-----E--TT
T ss_pred CCccEEEeCCCcEEEEeEecCcccCCceEEEEEeCCCCCC------EEEEEE------cCCCC-cccccc-----C--Cc
Confidence 56677899999999999987532 3579999832 1111 000000 00000 000000 0 01
Q ss_pred EEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCC--eeeEEEEEE
Q psy15390 94 IFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPS--VSKRITVDV 141 (142)
Q Consensus 94 ~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~--~s~~~~l~V 141 (142)
+..... .......|.|.+++.+|+|.|.|.+.+..+.. ....+.|.|
T Consensus 65 ~~~~~~-~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~~~i~L~V 113 (114)
T 1u9k_A 65 FTLKHD-PSEAMLQVQMTDLQVTDSGLYRCVIYHPPNDPVVLFHPVRLVV 113 (114)
T ss_dssp EEEEEE-GGGTEEEEEECSCCGGGCEEEEEEEECTTSCCEECSCCEEEEE
T ss_pred EEEEec-CcCCEEEEEECCCChHHCEEEEEEEecCCCCceeeeceEEEEE
Confidence 111111 11223468899999999999999998866432 345666666
No 495
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.81 E-value=1.5e-09 Score=69.26 Aligned_cols=66 Identities=20% Similarity=0.300 Sum_probs=42.7
Q ss_pred ecCCcEEEEEEEecC-CCC-eeEEEecCCcceecCCcceEE--------eeccceEEEeecCCCCCeEEEEEEEecC
Q psy15390 24 REEFNITLTCKAEGF-PAP-EIKWRREDNQPISINKRKKVH--------MHYGEQLNITKISRTEMGAYLCIATKIG 90 (142)
Q Consensus 24 ~~g~~v~l~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~--------~~~~~~l~i~~v~~~d~G~y~C~~~~~~ 90 (142)
.+|+.++|.|.+.+. |.+ .+.|++ +|..+......... ....+.|.|..+...|.|.|+|.+.|.+
T Consensus 147 ~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~ 222 (233)
T 3bqu_C 147 LTSGGASVVCFLNNFYPKDINVKWKI-DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT 222 (233)
T ss_dssp HHTTEEEEEEEEEEEBSSCEEEEEEE-C-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC-
T ss_pred hcCCceEEEEEEccccCCceEEEEEE-CCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCC
Confidence 469999999999884 443 699999 88776543000000 0112358899999999999999999864
No 496
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=98.81 E-value=6.2e-08 Score=56.03 Aligned_cols=31 Identities=19% Similarity=0.429 Sum_probs=24.8
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|... .....+.||+.
T Consensus 7 ~p~~v~v~~G~~vtL~C~~~-~~~~~v~W~rq 37 (121)
T 2oi9_C 7 SPRNKVAVTGEKVTLSCNQT-NNHNNMYWYRQ 37 (121)
T ss_dssp ECSEEEEETTCCEEEEEEES-SCCSEEEEEEE
T ss_pred CCCeEEecCCCcEEEEEEec-CCCCeEEEEEE
Confidence 56678899999999999964 34567999983
No 497
>3qjh_A 5C.C7 alpha chain; immunoglobulin domain, T cell receptor, immune system; 1.90A {Mus musculus} PDB: 3qiu_C* 3qiw_C* 3qjf_A 3qib_C 2ial_A 2iam_C 2ian_D 4e41_D 4e42_A 3rug_E* 3axl_A
Probab=98.81 E-value=3.2e-07 Score=57.85 Aligned_cols=111 Identities=14% Similarity=0.281 Sum_probs=65.3
Q ss_pred CCceeEEecCCcEEEEEEEecCCCCeeEEEecC-Cccee---c-C----CcceEEee-----ccceEEEeecCCCCCeEE
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED-NQPIS---I-N----KRKKVHMH-----YGEQLNITKISRTEMGAY 82 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~w~~~~-~~~~~---~-~----~~~~~~~~-----~~~~l~i~~v~~~d~G~y 82 (142)
.+..+.+.+|++++|.|...+. ...+.||+.. ++.+. . . ...|+... ....|.|.+++.+|+|.|
T Consensus 9 ~p~~v~v~~G~svtL~C~~s~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y 87 (205)
T 3qjh_A 9 SPSALSLHEGTGSALRCNFTTT-MRAVQWFRKNSRGSLINLFYLASGTKENGRLKSAFDSKERYSTLHIRDAQLEDSGTY 87 (205)
T ss_dssp ECSEEEEETTCCEEEEEECSSC-EEEEEEEEEC-CCCEEEEEEESSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred eCCEEEEeCCCCEEEEEEEECC-cceEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEEeccccccCeEE
Confidence 4667889999999999998766 4578999842 22211 0 0 11222221 123699999999999999
Q ss_pred EEEEEecCCccEEEE----EEEecc---c-cceEEEccCCCCCCeEEEEEEecCCC
Q psy15390 83 LCIATKIGPLKIFWE----IIFHMH---Y-GEQLNITKISRTEMGAYLCIATNNVP 130 (142)
Q Consensus 83 ~C~~~~~~~~~~~w~----~~~~~~---~-~~~l~i~~~~~~d~g~y~C~a~n~~~ 130 (142)
.|.+.......+.|- ..+... . ...+.+... +...++.|.+.+.+.
T Consensus 88 ~Cav~~~~~~~~~fG~GT~L~V~~~~~~~~p~V~~l~~~--~~~~tl~Cl~~~f~P 141 (205)
T 3qjh_A 88 FCAAEASNTNKVVFGTGTRLQVLPNIQNPDPAVYQLRDS--KSSDKSVCLFTDFDS 141 (205)
T ss_dssp EEEEEETTTCCEEEBCCEEEEEECCCSSCCCEEEEEEBC--C--CCEEEEEESCCT
T ss_pred EEEEEcCCCCccccCCCEEEEEeCcccCCCCEEEEeccc--CCCcEEEEEEEcccc
Confidence 999874322233441 122211 1 112222222 234689999997654
No 498
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=98.81 E-value=3.2e-08 Score=59.43 Aligned_cols=32 Identities=31% Similarity=0.635 Sum_probs=26.4
Q ss_pred CCceeEEecCCcEEEEEEEecC-CCCeeEEEec
Q psy15390 17 TPSSVAVREEFNITLTCKAEGF-PAPEIKWRRE 48 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~-~~~~~~w~~~ 48 (142)
.+..+.+.+|++++|.|...+. ....+.||+.
T Consensus 7 ~p~~~~v~~G~svtL~C~~s~~~~~~~v~Wyrq 39 (150)
T 3dmm_D 7 TPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRE 39 (150)
T ss_dssp ECSEEEEETTSCEEEEEECCCSSCCCEEEEEEE
T ss_pred CCCeEEEeCCCcEEEEEEecCCCCCceEEEEEe
Confidence 5677889999999999998764 4567999984
No 499
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.81 E-value=9.2e-08 Score=55.39 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=54.8
Q ss_pred CCceeEEecCCcEEEEEEEecCC--CCeeEEEecC-CcceecCCcceEEeeccceEEEeecCCCCCeEEEEEEEecCCcc
Q psy15390 17 TPSSVAVREEFNITLTCKAEGFP--APEIKWRRED-NQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLK 93 (142)
Q Consensus 17 ~~~~~~~~~g~~v~l~C~~~~~~--~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~~~~ 93 (142)
.+..+.+.+|++++|.|...... ...+.|++.. +... ..+....+ .......| .
T Consensus 16 ~~~~v~~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~-----~~li~~~~------~~~~~~~~------------R 72 (122)
T 1hkf_A 16 KAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVC-----IRLVTSSK------PRTMAWTS------------R 72 (122)
T ss_dssp CCEEEEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEE-----EEEEEECS------TTCCBCST------------T
T ss_pred CCceEEEecCCCEEEEeEccCCCCcccEEEEEcCCCCCCc-----eEEEEeCC------eEeEeecC------------c
Confidence 56778899999999999986532 3478999831 1100 00000000 00000001 1
Q ss_pred EEEEEEEeccccceEEEccCCCCCCeEEEEEEecCCCCCe--eeEEEEEE
Q psy15390 94 IFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSV--SKRITVDV 141 (142)
Q Consensus 94 ~~w~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~~~~~--s~~~~l~V 141 (142)
+... .........|.|.+++.+|+|.|.|.+........ ...+.|.|
T Consensus 73 ~~~~-~~~~~~~~sL~I~~l~~~Dsg~Y~C~v~~~~~~~~~~~~~l~L~V 121 (122)
T 1hkf_A 73 FTIW-DDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLVV 121 (122)
T ss_dssp EEEE-EETTTTEEEEEECSCCGGGCEEEEEEEECTTTCCEEEEEEEEEEE
T ss_pred EEEE-EcCcCCEEEEEEeCCCHHHCEEEEEEEEcCCCCcccccEEEEEEe
Confidence 1110 01112234688999999999999999987543333 34445554
No 500
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.81 E-value=5.5e-09 Score=65.18 Aligned_cols=65 Identities=17% Similarity=0.350 Sum_probs=48.4
Q ss_pred EEecCCcEEEEEEEecCCCCeeEEEecCCcceecCCcceEEeecc---ceEEEeecCCCCCeEEEEEEEecCC
Q psy15390 22 AVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG---EQLNITKISRTEMGAYLCIATKIGP 91 (142)
Q Consensus 22 ~~~~g~~v~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~---~~l~i~~v~~~d~G~y~C~~~~~~~ 91 (142)
.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.. ....... ..+.+.++...|.|.|+|.+.|...
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~-~~~~~~~----~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g 181 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQN-VSVPANT----SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHM 181 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETT-CCSCCEE----EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTT
T ss_pred ecCCCCeEEEEEEccccCCceEEEEe-CCCCccC----ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCc
Confidence 34679999999999999999999998 6554421 1111122 2467789999999999999998643
Done!