RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15390
(142 letters)
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 50.2 bits (119), Expect = 1e-09
Identities = 14/70 (20%), Positives = 21/70 (30%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRT 77
P VR ++ L K G W + Q K + G +L I +
Sbjct: 7 PEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQE 66
Query: 78 EMGAYLCIAT 87
G Y +
Sbjct: 67 HCGCYTLLVE 76
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 49.9 bits (118), Expect = 1e-09
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVH--MH 64
VPP + +S + ++TL C A+GFP P + W ++ + + + H
Sbjct: 2 VPPTVQARQS-IVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSD 60
Query: 65 YGEQLNITKISRTEMGAYLCIAT 87
+L I + + + Y+CIA
Sbjct: 61 DSSELTIRNVDKNDEAEYVCIAE 83
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 48.6 bits (115), Expect = 4e-09
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 3/82 (3%)
Query: 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGE 67
P + AV + C A G P P ++W + + + R + +
Sbjct: 2 PYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQEHRIGGYKVRNQ 60
Query: 68 --QLNITKISRTEMGAYLCIAT 87
L + + ++ G Y C+
Sbjct: 61 HWSLIMESVVPSDKGNYTCVVE 82
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 48.6 bits (115), Expect = 4e-09
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGE 67
P + + V++ ++T+ CK G PAP + W + +P+S +
Sbjct: 2 APKY--EQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH-NAKPLSGGRATVTDSG--- 55
Query: 68 QLNITKISRTEMGAYLCIAT 87
L I + + G Y C AT
Sbjct: 56 -LVIKGVKNGDKGYYGCRAT 74
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 48.4 bits (114), Expect = 5e-09
Identities = 14/70 (20%), Positives = 24/70 (34%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRT 77
P V E + C+ P + W ++D + K K + L I ++
Sbjct: 8 PYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGD 67
Query: 78 EMGAYLCIAT 87
+ G Y A
Sbjct: 68 DKGEYTVRAK 77
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 48.4 bits (114), Expect = 5e-09
Identities = 16/125 (12%), Positives = 38/125 (30%), Gaps = 37/125 (29%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRT 77
P + V + + L C EG P+I+W ++ ++++ ++
Sbjct: 3 PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLS----- 57
Query: 78 EMGAYLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRI 137
+ + R++ G Y C + +S+ +
Sbjct: 58 --------------------------------LKSVERSDAGRYWCQVEDGGETEISQPV 85
Query: 138 TVDVE 142
+ VE
Sbjct: 86 WLTVE 90
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 48.3 bits (114), Expect = 6e-09
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 8/83 (9%)
Query: 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH 64
+ P+I P+ +TL C A G P P+IKWR+ D +
Sbjct: 1 RQYAPSI--KAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQT------SKWLS 52
Query: 65 YGEQLNITKISRTEMGAYLCIAT 87
L+I + + G Y C A
Sbjct: 53 SEPLLHIQNVDFEDEGTYECEAE 75
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 48.9 bits (115), Expect = 6e-09
Identities = 22/139 (15%), Positives = 35/139 (25%), Gaps = 13/139 (9%)
Query: 5 KSVPPNIL--DTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVH 62
+ PP I P ++ V + L G PAP + W++ Q R
Sbjct: 1 RQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPD 60
Query: 63 MHYGEQLNITKISRTEMGAYLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYL 122
T K+ + + + + G Y
Sbjct: 61 APED----------TGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYT 110
Query: 123 CIATNNVPPSVSKRITVDV 141
N V +TV V
Sbjct: 111 VTVKNPV-GEDQVNLTVKV 128
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 47.2 bits (111), Expect = 1e-08
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Query: 15 ESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKI 74
++ P+ +E + + C P I W+ + I + + + I I
Sbjct: 5 KNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ-IRGI 63
Query: 75 SRTEMGAYLCIAT 87
+T+ G Y C
Sbjct: 64 KKTDEGTYRCEGR 76
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 47.2 bits (111), Expect = 1e-08
Identities = 14/70 (20%), Positives = 28/70 (40%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRT 77
P S+ V E + +C +G P P + W R+ + + + Y I+ + +
Sbjct: 6 PRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQAS 65
Query: 78 EMGAYLCIAT 87
+ G Y +
Sbjct: 66 DEGNYSVVVE 75
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 46.1 bits (108), Expect = 4e-08
Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 5 KSVPPNILDTESTPSSVAVREEF---NITLTCKAEGFPAPEIKWRREDNQPISINKRKKV 61
+S P P+ E +TLTC+A P +W+ + + + +
Sbjct: 1 RSYGPVFE---EQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKM-NGTELKMGPDSRY 56
Query: 62 HMHYGEQLNITKISRTEMGAYLCIAT 87
+ G+ + + + G+Y C+AT
Sbjct: 57 RLVAGDLVISNPVKAKDAGSYQCVAT 82
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 44.5 bits (104), Expect = 1e-07
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 16 STPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKIS 75
+ ++ +C A G P P ++W R+ S N+ + L +K+
Sbjct: 6 DVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGE----LRFSKLV 61
Query: 76 RTEMGAYLCIAT 87
+ G Y C+A
Sbjct: 62 LEDSGMYQCVAE 73
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 43.8 bits (102), Expect = 4e-07
Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 13/87 (14%)
Query: 14 TESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQ-------------PISINKRKK 60
P++ + ++ CK P I+W + + +
Sbjct: 8 QAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVN 67
Query: 61 VHMHYGEQLNITKISRTEMGAYLCIAT 87
E L I ++ + G Y C+A
Sbjct: 68 TTDKEIEVLYIRNVTFEDAGEYTCLAG 94
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 41.8 bits (97), Expect = 2e-06
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Query: 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKV-HMHYG 66
P I S V + + + G P PE +W + + ++
Sbjct: 4 APKIF---ERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNV 60
Query: 67 EQLNITKISRTEMGAYLCIAT 87
+L I ++ + + + A
Sbjct: 61 CELVIRDVTGEDSASIMVKAI 81
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 41.8 bits (97), Expect = 2e-06
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY 65
V P T + V E CK EG+P PE+ W ++DN + +
Sbjct: 6 HVKPYFT---KTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEE 62
Query: 66 GE-QLNITKISRTEMGAYLCIAT 87
G L I+++ + Y C A
Sbjct: 63 GNCSLTISEVCGDDDAKYTCKAV 85
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 41.0 bits (95), Expect = 3e-06
Identities = 8/73 (10%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRR--EDNQPISINKRKKVHMHYGEQLNITKI 74
+ + + C P + + +D ++ + + G++L
Sbjct: 9 VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTT 68
Query: 75 SRTEMGAYLCIAT 87
+ G Y C
Sbjct: 69 LPEDEGVYTCEVD 81
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 41.1 bits (95), Expect = 3e-06
Identities = 13/81 (16%), Positives = 22/81 (27%), Gaps = 3/81 (3%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG 66
+ P IL + + ++ F L G P P W D+ +
Sbjct: 1 LKPKIL---TASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSST 57
Query: 67 EQLNITKISRTEMGAYLCIAT 87
+ R + G Y
Sbjct: 58 TSIFFPSAKRADSGNYKLKVK 78
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 40.8 bits (94), Expect = 4e-06
Identities = 10/75 (13%), Positives = 20/75 (26%), Gaps = 3/75 (4%)
Query: 16 STPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISI---NKRKKVHMHYGEQLNIT 72
+V V T C A G + + + + N+
Sbjct: 6 LRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVV 65
Query: 73 KISRTEMGAYLCIAT 87
++ + G Y C+
Sbjct: 66 NTTKRDAGKYRCMIR 80
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 40.3 bits (93), Expect = 5e-06
Identities = 11/81 (13%), Positives = 20/81 (24%), Gaps = 2/81 (2%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG 66
P E + ++TLTC + + G
Sbjct: 2 APRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSR--WAGMG 59
Query: 67 EQLNITKISRTEMGAYLCIAT 87
+L + + + G Y C
Sbjct: 60 RRLLLRSVQLHDSGNYSCYRA 80
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 40.4 bits (93), Expect = 5e-06
Identities = 14/72 (19%), Positives = 23/72 (31%)
Query: 16 STPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKIS 75
P+ V RE L C EG ++D + + + L +
Sbjct: 7 DQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQ 66
Query: 76 RTEMGAYLCIAT 87
++ G Y C A
Sbjct: 67 ASDEGHYQCFAE 78
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 40.0 bits (92), Expect = 1e-05
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 12/90 (13%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQPISINKRKK----- 60
VPP+ T S PSSV + LTC +G P E W ++ ++ + +K
Sbjct: 1 VPPSK-PTISVPSSVTIGN--RAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMN 57
Query: 61 ---VHMHYGEQLNITKISRTEMGAYLCIAT 87
L ++ + G Y C A
Sbjct: 58 SSFTIDPKSGDLIFDPVTAFDSGEYYCQAQ 87
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 39.2 bits (90), Expect = 2e-05
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 11/89 (12%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKA-EGFPAPEIKWRREDNQP-------ISINKR 58
VPP+ T + PSS + LTC +G P E W ++ + +
Sbjct: 1 VPPSK-PTVNIPSSATIGN--RAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNS 57
Query: 59 KKVHMHYGEQLNITKISRTEMGAYLCIAT 87
V +L +S ++ G Y C A
Sbjct: 58 SYVLNPTTGELVFDPLSASDTGEYSCEAR 86
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 37.5 bits (86), Expect = 6e-05
Identities = 8/71 (11%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQ-LNITKISR 76
+ L C+ A ++ + R ++ + + L I ++
Sbjct: 7 LEDTTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATK 66
Query: 77 TEMGAYLCIAT 87
+ Y + T
Sbjct: 67 ADAAEYSVMTT 77
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 37.3 bits (85), Expect = 6e-05
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH 64
P + + + P + E T C+A G P PE+K ++ P+ I + V
Sbjct: 2 GPRLDERD-CPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD 57
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 37.3 bits (85), Expect = 7e-05
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 8 PPNILDTESTPSSVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVHMHYG 66
P + T S +VR ++T C A+ PA + W R N + M +
Sbjct: 1 PIMV--TVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR-----AMDFN 53
Query: 67 EQLNITKISRTEMGAYLCIAT 87
L I + ++ G Y+C +
Sbjct: 54 GILTIRNVQPSDAGTYVCTGS 74
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 35.4 bits (80), Expect = 4e-04
Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 11/88 (12%)
Query: 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY-- 65
PP + ++ SS + E L CK+E P + +
Sbjct: 2 PPRV---KAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFV 58
Query: 66 -----GEQLNITKISRTEM-GAYLCIAT 87
+L+I ++ G Y C T
Sbjct: 59 SSSQGRSELHIENLNMEADPGQYRCNGT 86
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 33.7 bits (76), Expect = 0.002
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 14 TESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHM-HYGEQLNIT 72
+ + V + I LT + E+KW + + + L I+
Sbjct: 9 QKKLEPAYQVSKGHKIRLTVELAD-HDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTIS 67
Query: 73 KISRTEMGAYLCIAT 87
+ S + AY C+
Sbjct: 68 QCSLADDAAYQCVVG 82
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 33.1 bits (74), Expect = 0.003
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 12/82 (14%)
Query: 18 PSSVAVREEFNITLTCKAEGFP---APEIKWRREDNQPISINKRKKVHMH---------Y 65
P V +IT + + G P +KW + +S + + +H Y
Sbjct: 11 PQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVY 70
Query: 66 GEQLNITKISRTEMGAYLCIAT 87
+L+IT G Y C +
Sbjct: 71 LFELHITDAQPAFTGGYRCEVS 92
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 33.2 bits (74), Expect = 0.003
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 8/81 (9%)
Query: 15 ESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMH--------YG 66
S+ V + E + L+C GF +P ++W+ + +
Sbjct: 8 HSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP 67
Query: 67 EQLNITKISRTEMGAYLCIAT 87
+ ++R + G Y C+ +
Sbjct: 68 TGITFKSVTREDTGTYTCMVS 88
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 33.0 bits (74), Expect = 0.003
Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 10/80 (12%)
Query: 18 PSSVAVREEFNITLTC---KAEGFPAPEIKWRREDNQPISINKRKKVHMH-------YGE 67
P+SV + + C +G PAP ++W + + +
Sbjct: 4 PASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHG 63
Query: 68 QLNITKISRTEMGAYLCIAT 87
L + + + G Y +A
Sbjct: 64 CLRLNQPTHVNNGNYTLLAA 83
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 32.6 bits (73), Expect = 0.004
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 13/87 (14%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG 66
P I ES S + + + +G P P ++W + ++ +K +H
Sbjct: 3 FAPTITFLESPTS------DHHWCIPFTVKGNPKPALQWFY-NGAILNESKYICTKIHVT 55
Query: 67 EQ------LNITKISRTEMGAYLCIAT 87
L + + G Y IA
Sbjct: 56 NHTEYHGCLQLDNPTHMNNGDYTLIAK 82
>d2ij0c1 b.1.1.1 (C:1-117) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 118
Score = 33.0 bits (74), Expect = 0.005
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQ 51
PS V V+ ++ + C++ + W R+ +
Sbjct: 7 HPSMVIVKSGTSVKIECRSLDTNIHTMFWYRQFPK 41
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 32.0 bits (71), Expect = 0.006
Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Query: 15 ESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQ------ 68
+ S V V E +I LTC GF +P ++W+ ++
Sbjct: 5 YTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS 64
Query: 69 --LNITKISRTEMGAYLCIAT 87
+ + ++R + G Y C+ +
Sbjct: 65 SGITFSSVTRKDNGEYTCMVS 85
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 31.9 bits (71), Expect = 0.007
Identities = 8/47 (17%), Positives = 18/47 (38%)
Query: 95 FWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141
E + + + ++IT + + G Y C S+ + + V
Sbjct: 38 DGEALKYWYENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITV 84
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 31.3 bits (70), Expect = 0.011
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 9/66 (13%)
Query: 28 NITLTC------KAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGA 81
+ L C K E P+++W ++ + N ++L + ++ G
Sbjct: 16 DGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH---FSGVKDRLIVMNVAEKHRGN 72
Query: 82 YLCIAT 87
Y C A+
Sbjct: 73 YTCHAS 78
Score = 25.2 bits (54), Expect = 2.3
Identities = 9/57 (15%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Query: 88 KIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATN---NVPPSVSKRITVDV 141
K + I F +L + ++ G Y C A+ +++ I
Sbjct: 41 KDCKPLLLDNIHFSGVKD-RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFIT 96
>d1j8hd1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 115
Score = 31.7 bits (71), Expect = 0.012
Identities = 11/72 (15%), Positives = 22/72 (30%), Gaps = 3/72 (4%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRRED---NQPISINKRKKVHMHYGEQLNITK 73
S V+V E + L C P + W + + + + G +
Sbjct: 6 LGSHVSVSEGALVLLRCNYSSSVPPYLFWYVQYPNQGLQLLLKYTSAATLVKGINGFEAE 65
Query: 74 ISRTEMGAYLCI 85
++E +L
Sbjct: 66 FKKSETSFHLTK 77
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 31.0 bits (69), Expect = 0.014
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 11/81 (13%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG 66
+P ++ E P +V E+ ++TL C+ P + +
Sbjct: 3 LPKAVVFLE--PQWYSVLEKDSVTLKCQGAYSPEDNSTQW---------FHNESLISSQA 51
Query: 67 EQLNITKISRTEMGAYLCIAT 87
I + + G Y C
Sbjct: 52 SSYFIDAATVNDSGEYRCQTN 72
Score = 23.7 bits (50), Expect = 4.6
Identities = 7/47 (14%), Positives = 13/47 (27%), Gaps = 3/47 (6%)
Query: 95 FWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141
F I + + G Y C + S + ++V
Sbjct: 41 FHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTL---SDPVQLEV 84
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 30.3 bits (67), Expect = 0.025
Identities = 9/55 (16%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Query: 91 PLKIFWEIIFHMHYGEQLN----ITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141
+K+ + + + I + + + G Y C SK +T+ V
Sbjct: 30 LVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITV 84
Score = 29.5 bits (65), Expect = 0.043
Identities = 8/71 (11%), Positives = 19/71 (26%), Gaps = 9/71 (12%)
Query: 18 PSSVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR 76
+ +E I L C + P ++ + + + + +
Sbjct: 7 TPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIP--------QANH 58
Query: 77 TEMGAYLCIAT 87
+ G Y C
Sbjct: 59 SHSGDYHCTGN 69
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 30.5 bits (67), Expect = 0.027
Identities = 13/87 (14%), Positives = 23/87 (26%), Gaps = 13/87 (14%)
Query: 14 TESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQ----- 68
++ V I L C G + W+ + + + E
Sbjct: 5 VSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKR 64
Query: 69 -------LNITKISRTEMGA-YLCIAT 87
LNI++I + C A
Sbjct: 65 RSTLITVLNISEIESRFYKHPFTCFAK 91
>d1ac6a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 110
Score = 30.5 bits (68), Expect = 0.030
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRR 47
T VA+ EE +T+ C P + W
Sbjct: 6 TEGQVALSEEDFLTIHCNYSASGYPALFWYV 36
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 30.0 bits (66), Expect = 0.033
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 12 LDTESTPSSVAVREEFNITLTCKAE-GFPAPEIKWRREDNQPISINKRKKVHMHYGEQ-- 68
L + PS + + C+ +I W + + +S N+++ + +
Sbjct: 1 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSS 60
Query: 69 -LNITKISRTEMGAYLCIAT 87
L I + + G Y C+ T
Sbjct: 61 TLTIYNANIDDAGIYKCVVT 80
>d1i9ea_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 30.1 bits (67), Expect = 0.040
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDN 50
+ V V E ++ L CK P + W +
Sbjct: 6 PDARVTVSEGASLQLRCKYSYSATPYLFWYVQYP 39
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 29.9 bits (66), Expect = 0.044
Identities = 15/85 (17%), Positives = 22/85 (25%), Gaps = 10/85 (11%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG 66
PP ++ E + + G P P + W + G
Sbjct: 4 YPPRVVSLEEPELRL------EHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEG 57
Query: 67 EQ----LNITKISRTEMGAYLCIAT 87
E L K + G Y IA
Sbjct: 58 EISEGCLLFNKPTHYNNGNYTLIAK 82
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 29.5 bits (65), Expect = 0.051
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 18 PSSVAVREEFNITLTCKAEGF-PAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR 76
+EE I L C + ++ + + N + + + H+ +I K +
Sbjct: 9 APRWVFKEEDPIHLRCHSWKNTALHKVTYLQ--------NGKDRKYFHHNSDFHIPKATL 60
Query: 77 TEMGAYLCIAT 87
+ G+Y C
Sbjct: 61 KDSGSYFCRGL 71
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 29.7 bits (65), Expect = 0.053
Identities = 14/89 (15%), Positives = 22/89 (24%), Gaps = 12/89 (13%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYG 66
PP I S+ + + C P P+ + + +
Sbjct: 6 GPPII----SSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETI 61
Query: 67 EQ-------LNITKISR-TEMGAYLCIAT 87
L I+ I R Y C A
Sbjct: 62 STEEGVISTLTISNIVRADFQTIYNCTAW 90
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 29.6 bits (65), Expect = 0.059
Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 16 STPSSVAVREEFNITLTCKAEGFP-APEIKWRREDNQPISINKRKKVHMHYGEQL----- 69
S ++ L C + P + W + + + ++ + +
Sbjct: 8 KRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFIL 67
Query: 70 NITKISRTEMGAYLCIAT 87
+ + + G+Y C A
Sbjct: 68 HFEPVLPNDNGSYRCSAN 85
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 28.9 bits (63), Expect = 0.098
Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 3/93 (3%)
Query: 51 QPISINKRKKVHMHYGE--QLNITKISRTEMGAYLCIATKIGPLKIFWEIIFHMHYGEQL 108
Q S +R V + G + +Y + + F L
Sbjct: 4 QEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNL 63
Query: 109 NITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141
I K +++G Y C AT+++ ++K +
Sbjct: 64 YIAKTEASDLGNYSCFATSHI-DFITKSVFSKF 95
>d1de4a1 b.1.1.2 (A:182-275) Hemochromatosis protein Hfe, alpha-3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 28.8 bits (64), Expect = 0.099
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 10/52 (19%)
Query: 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGF-PAP-EIKWRREDNQPIS 54
+ VPP + T SS TL C+A + P +KW + D QP+
Sbjct: 1 QQVPPLVKVTHHVTSS-------VTTLRCRALNYYPQNITMKWLK-DKQPMD 44
>d1u3ha1 b.1.1.1 (A:2-116) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 110
Score = 28.7 bits (63), Expect = 0.11
Identities = 12/71 (16%), Positives = 20/71 (28%), Gaps = 2/71 (2%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR 76
+P S+ V E L C E W ++ + + ++ I
Sbjct: 5 SPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFF 64
Query: 77 --TEMGAYLCI 85
E L I
Sbjct: 65 NKREKKLSLHI 75
>d1kgcd1 b.1.1.1 (D:2-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 112
Score = 29.0 bits (64), Expect = 0.11
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
P+S+ EE + L C
Sbjct: 4 QPNSMESNEEEPVHLPCNHSTI 25
>d2bnqd1 b.1.1.1 (D:2-114) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 113
Score = 28.8 bits (63), Expect = 0.12
Identities = 9/49 (18%), Positives = 18/49 (36%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY 65
P++++V E N+ L C ++W R+D +
Sbjct: 6 IPAALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQR 54
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 28.9 bits (63), Expect = 0.12
Identities = 12/125 (9%), Positives = 25/125 (20%), Gaps = 17/125 (13%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRT 77
+ L C+ P S + + +
Sbjct: 9 GHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGR 68
Query: 78 EMGAYLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRI 137
I L+I + ++ G Y C ++ +
Sbjct: 69 TELLKESIGEGKVALRIQN----------------VRFSDEGGYTCFFRDHS-YQEEAAV 111
Query: 138 TVDVE 142
+ VE
Sbjct: 112 ELKVE 116
>d1vesa_ b.1.1.1 (A:) Novel antigen receptor 12Y-2 {Spotted
wobbegong (Orectolobus maculatus) [TaxId: 168098]}
Length = 113
Score = 28.7 bits (63), Expect = 0.14
Identities = 4/22 (18%), Positives = 8/22 (36%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
TP + ++T+ C
Sbjct: 6 TPRTATKETGESLTINCVLRDA 27
>d1fo0b_ b.1.1.1 (B:) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 112
Score = 28.6 bits (63), Expect = 0.14
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 15 ESTPSSVAVREEFNITLTCKAEGFPAPEIKWRRED 49
E P V + L C + P + W ++D
Sbjct: 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQD 39
>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme)
{Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}
Length = 112
Score = 28.6 bits (63), Expect = 0.15
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
TP SV ++T+ C
Sbjct: 5 TPRSVTKETGESLTINCVLRDA 26
>d2atpb1 b.1.1.1 (B:1-115) CD8 {Mouse (Mus musculus), beta-chain
[TaxId: 10090]}
Length = 115
Score = 28.3 bits (62), Expect = 0.19
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
TPSS+ V+ ++C+ +
Sbjct: 4 TPSSLLVQTNHTAKMSCEVKSI 25
>d1fnga1 b.1.1.2 (A:82-182) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-E group [TaxId: 10090]}
Length = 101
Score = 28.1 bits (62), Expect = 0.19
Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 12/101 (11%)
Query: 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGF--PAPEIKWRR---EDNQPISINKRK 59
+V P + T + S V + E L C + F P + W R + +S
Sbjct: 2 ANVAPEV--TVLSRSPVNLGEP--NILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFL 57
Query: 60 KVHMHYGEQLNITKISRTEMGAYLCIATKIG---PLKIFWE 97
H + + + Y C G PL+ WE
Sbjct: 58 PRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKHWE 98
>d2ak4d1 b.1.1.1 (D:1-116) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 114
Score = 27.9 bits (61), Expect = 0.23
Identities = 7/32 (21%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 17 TPSSVAVREEFNITLTCKAEG-FPAPEIKWRR 47
+ ++V E+ ++TL C E + W +
Sbjct: 6 AQTEISVVEKEDVTLDCVYETRDTTYYLFWYK 37
>d1d5mb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DR group [TaxId:
9606]}
Length = 98
Score = 27.7 bits (61), Expect = 0.23
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Query: 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEI--KWRREDNQPIS 54
+ V P + T + ++ + L C GF I +W R + +
Sbjct: 1 RRVYPEV--TVYPAKTQPLQH--HNLLVCSVNGFYPGSIEVRWFRNGQEEKT 48
>d2cdea1 b.1.1.1 (A:2-115) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 114
Score = 27.9 bits (61), Expect = 0.26
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 17 TPSSVAVREEFNITLTCKAEGFP 39
+P S+ + E N TL C P
Sbjct: 6 SPQSLIILEGKNCTLQCNYTVSP 28
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 27.3 bits (59), Expect = 0.30
Identities = 13/47 (27%), Positives = 18/47 (38%)
Query: 95 FWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141
E + L I I R + G Y C +N V S I +D+
Sbjct: 45 LTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDI 91
Score = 25.8 bits (55), Expect = 1.0
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR 76
++ V+E ++TLTC + A + ++ L I I R
Sbjct: 9 QVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMT---LSQNNSILRIDPIKR 65
Query: 77 TEMGAYLCIAT 87
+ G Y C +
Sbjct: 66 EDAGEYQCEIS 76
>d1lk3l1 b.1.1.1 (L:1-106) Immunoglobulin light chain kappa
variable domain, VL-kappa {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 106
Score = 27.3 bits (60), Expect = 0.32
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKW 45
P ++ V +T++CKA + W
Sbjct: 7 PPALTVSPGEKLTISCKASESVTSRMHW 34
>d1uvqb1 b.1.1.2 (B:95-191) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 97
Score = 27.3 bits (60), Expect = 0.33
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 16/101 (15%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIK--WRREDNQPISINK-----RK 59
V P + T S + A+ L C F +IK W R ++Q + +
Sbjct: 1 VEPTV--TISPSRTEALNHH--NLLVCSVTDFYPGQIKVRWFR-NDQEETAGVVSTPLIR 55
Query: 60 KVHMHYGEQLNITKISRTEMGAYLCIATKIG---PLKIFWE 97
+ L + +++ Y C P+ + W
Sbjct: 56 NGDWTFQ-ILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWR 95
>d1hyrc1 b.1.1.2 (C:181-274) Class I MHC homolog, alpha-3 domain
{Human (Homo sapiens), Mic-a [TaxId: 9606]}
Length = 94
Score = 27.3 bits (60), Expect = 0.34
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGF-PAP-EIKWRREDN 50
+VPP + T S S E NIT+TC+A GF P + WR++
Sbjct: 1 TVPPMVNVTRSEAS------EGNITVTCRASGFYPWNITLSWRQDGV 41
>d1tvda_ b.1.1.1 (A:) T-cell antigen receptor {Human (Homo
sapiens), delta-chain [TaxId: 9606]}
Length = 116
Score = 27.6 bits (60), Expect = 0.34
Identities = 6/34 (17%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 17 TPSSVAVREEFNITLTCKAEG-FPAPEIKWRRED 49
+ V + L C + + P++ W R
Sbjct: 6 SSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIR 39
>d1op3k1 b.1.1.1 (K:2-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Engineered (including hybrid
species)}
Length = 106
Score = 27.3 bits (60), Expect = 0.39
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 17 TPSSVAVREEFNITLTCKAEGFP-------------APEIKWRREDNQPISINKRKKVHM 63
+PS+++ IT+TC+A AP++ + + R
Sbjct: 6 SPSTLSASVGDTITITCRASQSIETWLAWYQQKPGKAPKLLIYKASTLKTGVPSRFSGSG 65
Query: 64 HYGE-QLNITKISRTEMGAYLC 84
E L I+ + + Y C
Sbjct: 66 SGTEFTLTISGLQFDDFATYHC 87
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 27.0 bits (58), Expect = 0.42
Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 1/70 (1%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRT 77
+ +V ++ L C+ EG + W S K + S
Sbjct: 9 VPNASVDVGDDVLLRCQVEGRGLEQAGWIL-TELEQSATVMKSGGLPSLGLTLANVTSDL 67
Query: 78 EMGAYLCIAT 87
C A
Sbjct: 68 NRKNVTCWAE 77
>d1mbma_ b.47.1.3 (A:) NSP4 proteinase {Equine arteritis virus, EAV
[TaxId: 11047]}
Length = 198
Score = 27.6 bits (61), Expect = 0.42
Identities = 6/40 (15%), Positives = 16/40 (40%)
Query: 103 HYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDVE 142
G+ L ++ + + + ++P + I DV+
Sbjct: 142 PSGKLLGADTVTLSSLSKHFTGPLTSIPKDIPDNIIADVD 181
>d1mjul2 b.1.1.2 (L:108-214) Immunoglobulin light chain kappa
constant domain, CL-kappa {Mouse (Mus musculus) [TaxId:
10090]}
Length = 107
Score = 27.0 bits (59), Expect = 0.48
Identities = 18/110 (16%), Positives = 30/110 (27%), Gaps = 25/110 (22%)
Query: 18 PSSVAVREEFNITLTCKAEGF--PAPEIKWRREDNQPISINKRKKVHMHYGE-------Q 68
P S ++ C F +KW+ + ++ + +
Sbjct: 12 PPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSST 71
Query: 69 LNITKISRTEMGAYLCIATKIGPLKIFWEIIFHMHYGEQLNITK-ISRTE 117
L +TK +Y C AT H I K +R E
Sbjct: 72 LTLTKDEYERHNSYTCEAT---------------HKTSTSPIVKSFNRNE 106
>d2esvd1 b.1.1.1 (D:4-116) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 110
Score = 27.1 bits (59), Expect = 0.49
Identities = 9/69 (13%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Query: 18 PSSVAVREEFNITLTCKAEGFPA-PEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR 76
P S+ E L C + W R+ + + + ++ I+
Sbjct: 5 PPSMDCAEGRAANLPCNHSTISGNEYVYWYRQIHSQGPQYIIHGLKNNETNEMASLIITE 64
Query: 77 TEMGAYLCI 85
+ L +
Sbjct: 65 DRKSSTLIL 73
>d1smoa_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on
myeloid cells 1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 27.1 bits (59), Expect = 0.50
Identities = 4/25 (16%), Positives = 9/25 (36%)
Query: 14 TESTPSSVAVREEFNITLTCKAEGF 38
T+ T ++E + + C
Sbjct: 2 TKLTEEKYELKEGQTLDVKCDYTLE 26
>d1lp9e1 b.1.1.1 (E:0-117) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 26.8 bits (58), Expect = 0.58
Identities = 6/28 (21%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 12 LDT-ESTPSSVAVREEFNITLTCKAEGF 38
+D+ T V + E + L C +
Sbjct: 1 MDSVTQTEGLVTLTEGLPVMLNCTYQST 28
>d1i8ka_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 106
Score = 26.6 bits (58), Expect = 0.65
Identities = 6/31 (19%), Positives = 15/31 (48%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRR 47
+P+S++V +T+ C ++ W +
Sbjct: 7 SPASLSVATGEKVTIRCMTSTDIDDDMNWYQ 37
>d1hxma1 b.1.1.1 (A:1-120) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 120
Score = 26.8 bits (58), Expect = 0.66
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 18 PSSVAVREEFNITLTCKAEGF 38
+V V TL C +G
Sbjct: 8 HQTVPVSIGVPATLRCSMKGE 28
>d1mexl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 26.6 bits (58), Expect = 0.70
Identities = 9/69 (13%), Positives = 20/69 (28%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR 76
+ ++ +++TCKA + W ++ Y + S
Sbjct: 7 SQKFMSTSLGNRVSVTCKASQNVGTNVAWFQQKPGQSPKTLIYSASYRYSGVPDRFTGSG 66
Query: 77 TEMGAYLCI 85
+ L I
Sbjct: 67 SGTDFTLTI 75
>d1fo0a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 26.7 bits (58), Expect = 0.72
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 17 TPSSVAVREEFNITLTCKAEG 37
T +S++V E+ +T+ C E
Sbjct: 5 TQTSISVMEKTTVTMDCVYET 25
>d1ow0a1 b.1.1.2 (A:242-342) Immunoglobulin heavy chain alpha
constant domain 2, CH2-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 26.2 bits (57), Expect = 0.74
Identities = 6/46 (13%), Positives = 11/46 (23%), Gaps = 3/46 (6%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPE---IKWRREDNQPISINKRKK 60
P+ + LTC G W + ++
Sbjct: 10 PALEDLLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVQGPPER 55
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 26.1 bits (56), Expect = 0.86
Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 9/70 (12%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRT 77
P + V +E ++TLTC+ P + + + + K +
Sbjct: 11 PQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNL---------IPTHTQPSYRFKANNN 61
Query: 78 EMGAYLCIAT 87
+ G Y C
Sbjct: 62 DSGEYTCQTG 71
>d1h5ba_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 113
Score = 26.3 bits (57), Expect = 0.96
Identities = 10/69 (14%), Positives = 21/69 (30%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR 76
+PS++++ E + L C +R+ + +L S
Sbjct: 7 SPSALSLHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSE 66
Query: 77 TEMGAYLCI 85
+ L I
Sbjct: 67 RARYSTLHI 75
>d1hxma2 b.1.1.2 (A:121-206) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 86
Score = 25.8 bits (56), Expect = 0.98
Identities = 8/73 (10%), Positives = 21/73 (28%), Gaps = 6/73 (8%)
Query: 14 TESTPSSVAVREEFNITLTCKAEGFPAPEIK--WRREDNQPISINKRKKVHMHYGEQLNI 71
+ PS ++ + C + F +I+ + + V G+ +
Sbjct: 3 PHTKPSVFVMKNG--TNVACLVKEFYPKDIRINLVS-SKKITEFDP-AIVISPSGKYNAV 58
Query: 72 TKISRTEMGAYLC 84
+ + C
Sbjct: 59 KLGKYEDSNSVTC 71
>d1t7va1 b.1.1.2 (A:184-277) Zinc-alpha-2-glycoprotein, ZAG,
alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 25.8 bits (56), Expect = 1.1
Identities = 19/92 (20%), Positives = 26/92 (28%), Gaps = 13/92 (14%)
Query: 18 PSSVAV----REEFNITLTCKAEGFPAPEI--KWRREDNQPISINKRKKVHM---HYGEQ 68
P SV V L C A F +I W R + R V +
Sbjct: 3 PPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTR-AGEVQEPELRGDVLHNGNGTYQS 61
Query: 69 LNITKISRTEMGAYLCIATKIG---PLKIFWE 97
+ + + Y C PL + WE
Sbjct: 62 WVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWE 93
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 26.1 bits (56), Expect = 1.1
Identities = 20/131 (15%), Positives = 38/131 (29%), Gaps = 20/131 (15%)
Query: 15 ESTPSSVAVREEFNITLTCKAEGFPAP----EIKWRREDNQPISINKRKKVHMHYGEQLN 70
+ + + L CK P +I+W P K +V + Y
Sbjct: 8 TTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLI---SPADNQKVDQVIILYSGDKI 64
Query: 71 ITKISRTEMGAYLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVP 130
G + + +N+T + +++G Y C P
Sbjct: 65 YDDYYPDLKGRVHFTSNDLKSGDAS------------INVTNLQLSDIGTYQCKVKKA-P 111
Query: 131 PSVSKRITVDV 141
+K+I + V
Sbjct: 112 GVANKKIHLVV 122
>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 25.8 bits (56), Expect = 1.1
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 8 PPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGE 67
P I + S V + ++ + C+A A + N R+ + +
Sbjct: 7 MPFIS---AKSSPVIPLDG-SVKIQCQAI-REAYLTQLMIIKNSTYREIGRRLKFWNETD 61
Query: 68 -QLNITKISRTEMGAYLC 84
+ I + + G Y C
Sbjct: 62 PEFVIDHMDANKAGRYQC 79
>d2ntsp1 b.1.1.1 (P:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 113
Score = 26.0 bits (56), Expect = 1.1
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 17 TPSSVAVREEFNITLTCKAEG 37
TP + +TL+C
Sbjct: 5 TPRYLIKTRGQQVTLSCSPIS 25
>d1bd2d1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 111
Score = 25.9 bits (56), Expect = 1.1
Identities = 6/29 (20%), Positives = 9/29 (31%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKW 45
S++V+E L C W
Sbjct: 6 NSPSLSVQEGRISILNCDYTNSMFDYFLW 34
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 25.8 bits (55), Expect = 1.2
Identities = 19/128 (14%), Positives = 32/128 (25%), Gaps = 34/128 (26%)
Query: 18 PSSVAVREEFNITLTCKAEGFP---APEIKWRREDNQPISINKRKKVHMHYGEQLNITKI 74
P V+ +IT K + P IKW + ++ K + + +
Sbjct: 7 PQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFE------ 60
Query: 75 SRTEMGAYLCIATKIGPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVS 134
Y ++ I K G Y C T S
Sbjct: 61 ------------------------RHSRVYTFEMQIIKAKDNFAGNYRCEVTYKD-KFDS 95
Query: 135 KRITVDVE 142
++V
Sbjct: 96 CSFDLEVH 103
>d1nezg_ b.1.1.1 (G:) CD8 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 122
Score = 25.8 bits (56), Expect = 1.2
Identities = 5/31 (16%), Positives = 9/31 (29%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRR 47
P + + L C+ G + W
Sbjct: 7 FPKKMDAELGQKVDLVCEVLGSVSQGCSWLF 37
>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 98
Score = 25.7 bits (56), Expect = 1.2
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEI--KWRREDN 50
+ PP++ + + RE + L C GF E+ WR+
Sbjct: 1 TRPPSV--QVAKTTPFNTREP--VMLACYVWGFYPAEVTITWRKNGK 43
>d1c5cl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 25.8 bits (56), Expect = 1.3
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRR 47
+PSS++ ++LTC+ + + W +
Sbjct: 7 SPSSLSASLGERVSLTCRTSQEISGYLSWLQ 37
>d2mhaa1 b.1.1.2 (A:182-270) Class I MHC, alpha-3 domain {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 89
Score = 25.3 bits (55), Expect = 1.4
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 6/39 (15%)
Query: 18 PSSVAV----REEFNITLTCKAEGFPAPEI--KWRREDN 50
V R E +TL C A GF +I W+
Sbjct: 3 SPKAHVTHHSRPEDKVTLRCWALGFYPADITLTWQLNGE 41
>d1f3rb2 b.1.1.1 (B:139-257) Immunoglobulin light chain kappa
variable domain, VL-kappa {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 119
Score = 25.9 bits (56), Expect = 1.4
Identities = 10/69 (14%), Positives = 21/69 (30%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR 76
+PS ++ +TL+CK + W ++ + + S
Sbjct: 7 SPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSG 66
Query: 77 TEMGAYLCI 85
+ L I
Sbjct: 67 SGTDYTLTI 75
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3,
second domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 25.3 bits (54), Expect = 1.5
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 114 SRTEMGAYLCIATNNVPPSVSKRITVDV 141
T+ + C A N + S+ TV +
Sbjct: 57 GVTQSTMFSCEAHNLKGLASSRTATVHL 84
>d1nfde1 b.1.1.1 (E:2-107) Immunoglobulin light chain lambda
variable domain, VL-lambda {Hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 108
Score = 25.5 bits (55), Expect = 1.5
Identities = 12/68 (17%), Positives = 22/68 (32%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRT 77
PSS +V + +TC + P W ++ + + + S +
Sbjct: 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTS 65
Query: 78 EMGAYLCI 85
A L I
Sbjct: 66 GTTATLTI 73
>d1tjgl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Engineered (including hybrid
species)}
Length = 107
Score = 25.5 bits (55), Expect = 1.5
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKW 45
+PSS++ IT+TC+A + W
Sbjct: 7 SPSSLSASVGDRITITCRASQGVTSALAW 35
>d1ypzf1 b.1.1.1 (F:1-120) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 120
Score = 25.5 bits (55), Expect = 1.5
Identities = 3/22 (13%), Positives = 8/22 (36%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
S++ + ++CK
Sbjct: 7 PEISISRPRDETAQISCKVFIE 28
>d1cd0a_ b.1.1.1 (A:) Immunoglobulin light chain lambda variable
domain, VL-lambda {Human (Homo sapiens), cluster 1
[TaxId: 9606]}
Length = 111
Score = 25.4 bits (55), Expect = 1.7
Identities = 5/21 (23%), Positives = 9/21 (42%)
Query: 18 PSSVAVREEFNITLTCKAEGF 38
P SV+ +T++C
Sbjct: 7 PHSVSESPGKTVTISCTRSSG 27
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 99
Score = 25.3 bits (55), Expect = 1.7
Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 14/102 (13%)
Query: 5 KSVPPNILDTESTPSSVAVREEFNITLTCKAEGF-PAP-EIKWRREDNQPISINKRKKVH 62
+ P + T + S V + + TL C + P I W + Q ++ +
Sbjct: 2 TNEVPEV--TVFSKSPVTLGQP--NTLICLVDNIFPPVVNITWLS-NGQSVTEGVSETSF 56
Query: 63 MHYGE----QLNITKISRTEMGAYLCIATKIG---PLKIFWE 97
+ + +++ + Y C G PL WE
Sbjct: 57 LSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWE 98
>d1kgce1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 25.5 bits (55), Expect = 1.8
Identities = 3/21 (14%), Positives = 7/21 (33%)
Query: 17 TPSSVAVREEFNITLTCKAEG 37
+P + ++ L C
Sbjct: 5 SPRYKVAKRGQDVALRCDPIS 25
>d1k5na1 b.1.1.2 (A:182-276) Class I MHC, alpha-3 domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 25.0 bits (54), Expect = 1.9
Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 6/43 (13%)
Query: 18 PSSVAV----REEFNITLTCKAEGFPAPEI--KWRREDNQPIS 54
P V + TL C A GF EI W+R+
Sbjct: 3 PPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQ 45
>d1ogad1 b.1.1.1 (D:3-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 115
Score = 25.2 bits (54), Expect = 2.0
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 15 ESTPSSVAVREEFNITLTCKAEGF 38
E +P ++++E N+T+ C +
Sbjct: 4 EQSPQFLSIQEGENLTVYCNSSSV 27
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 25.0 bits (53), Expect = 2.0
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 95 FWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNV 129
+ + + L I +S + G Y C++ V
Sbjct: 39 AESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERV 73
>d1ogae1 b.1.1.1 (E:5-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 114
Score = 25.1 bits (54), Expect = 2.0
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 17 TPSSVAVREEFNITLTCKA 35
+P + +E N+TL+C+
Sbjct: 5 SPKYLFRKEGQNVTLSCEQ 23
>d3bp5a1 b.1.1.1 (A:1-114) Programmed cell death protein 1, PD1,
extracellular domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 114
Score = 25.1 bits (54), Expect = 2.1
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
P+ + V E N T TC +
Sbjct: 5 YPAWLTVSEGANATFTCSLSNW 26
>d3cx5k1 b.1.1.1 (K:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 25.0 bits (54), Expect = 2.2
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRR 47
TP S+A +T++C+A + W +
Sbjct: 7 TPVSLAASLGDRVTISCRASQDINNFLNWYQ 37
>d2esve1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 111
Score = 25.1 bits (54), Expect = 2.4
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 17 TPSSVAVREEFNITLTCKAEG 37
PS + + +TL C
Sbjct: 5 FPSHSVIEKGQTVTLRCDPIS 25
>d1rzfl1 b.1.1.1 (L:2-108) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 2 [TaxId: 9606]}
Length = 111
Score = 25.1 bits (54), Expect = 2.6
Identities = 5/21 (23%), Positives = 9/21 (42%)
Query: 18 PSSVAVREEFNITLTCKAEGF 38
P SV+ +T++C
Sbjct: 7 PPSVSAAPGQKVTISCSGSSS 27
>d1j1pl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 107
Score = 24.7 bits (53), Expect = 2.6
Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 14/90 (15%)
Query: 17 TPSSVAVREEFNITLTCKAEGF-------------PAPEIKWRREDNQPISINKRKKVHM 63
+P++++V +++L+C+A +P + + I R
Sbjct: 7 SPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG 66
Query: 64 HYGE-QLNITKISRTEMGAYLCIATKIGPL 92
+ L+I + + G Y C P
Sbjct: 67 SGTDFTLSINSVETEDFGMYFCQQANSWPY 96
>d1q9ra1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 1.2 [TaxId: 10090]}
Length = 113
Score = 24.7 bits (53), Expect = 2.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
+PSS+AV +T++CK+
Sbjct: 7 SPSSLAVSAGEKVTMSCKSSQS 28
>d1kcvl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 24.7 bits (53), Expect = 3.1
Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 14/90 (15%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQP--------ISINKRKKVHMHYGE- 67
+P S+ + +TL CKA + W ++ S G
Sbjct: 7 SPKSMGMSVGEAVTLNCKASENVGTYVSWYQQKPGQSPVLLIYGASNRYTGVPDRFTGSG 66
Query: 68 -----QLNITKISRTEMGAYLCIATKIGPL 92
L I+ + + Y C + PL
Sbjct: 67 SATDFTLTISSVQADDDADYYCGQSYSSPL 96
>d1yjdc1 b.1.1.1 (C:1-118) CD28 {Human (Homo sapiens) [TaxId:
9606]}
Length = 118
Score = 24.7 bits (53), Expect = 3.4
Identities = 6/24 (25%), Positives = 10/24 (41%), Gaps = 2/24 (8%)
Query: 15 ESTPSSVAVREEFNITLTCKAEGF 38
+ +P VA + L+CK
Sbjct: 6 KQSPMLVAYDNA--VNLSCKYSYN 27
>d2gsia1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 2 [TaxId: 10090]}
Length = 111
Score = 24.7 bits (53), Expect = 3.4
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
+P+S+AV T++C A
Sbjct: 7 SPASLAVSLGQPATISCGASKS 28
>d1a0ql1 b.1.1.1 (L:2-108) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 106
Score = 24.7 bits (53), Expect = 3.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRR 47
+PSS++ +T+TCKA I W +
Sbjct: 6 SPSSLSASLGGKVTITCKASQDIKKYIGWYQ 36
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 24.2 bits (51), Expect = 3.7
Identities = 13/70 (18%), Positives = 18/70 (25%), Gaps = 9/70 (12%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRT 77
P + + N+TLTC F + LNI
Sbjct: 8 PPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLS---------EETNSSLNIVNAKFE 58
Query: 78 EMGAYLCIAT 87
+ G Y C
Sbjct: 59 DSGEYKCQHQ 68
Score = 23.8 bits (50), Expect = 4.4
Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 3/47 (6%)
Query: 95 FWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141
F LNI + G Y C S+ + ++V
Sbjct: 37 FHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNE---SEPVYLEV 80
>d3frua1 b.1.1.2 (A:179-269) Fc (IgG) receptor, alpha-3 domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 24.2 bits (52), Expect = 4.0
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 6/38 (15%)
Query: 18 PSSVAV----REEFNITLTCKAEGF-PAP-EIKWRRED 49
P S+ + + LTC A F P + ++ R
Sbjct: 3 PPSMRLKARPGNSGSSVLTCAAFSFYPPELKFRFLRNG 40
>d1hxmb1 b.1.1.1 (B:1-123) T-cell antigen receptor {Human (Homo
sapiens), delta-chain [TaxId: 9606]}
Length = 123
Score = 24.4 bits (52), Expect = 4.3
Identities = 4/22 (18%), Positives = 4/22 (18%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
S L C G
Sbjct: 7 PQISSTKTLSKTARLECVVSGI 28
>d2cdeb1 b.1.1.1 (B:5-116) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 24.4 bits (52), Expect = 4.5
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 17 TPSSVAVREEFNITLTCKA 35
TP + + ITL C
Sbjct: 4 TPRYLVIGTGKKITLECSQ 22
>d1i1ca2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 102
Score = 24.2 bits (52), Expect = 4.6
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 11/45 (24%)
Query: 17 TPSSVAV------REEF---NITLTCKAEGF--PAPEIKWRREDN 50
TP V +EE +++TC +GF P +W+
Sbjct: 1 TPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQ 45
>d1lgva1 b.1.1.1 (A:1-112) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 4 [TaxId: 9606]}
Length = 112
Score = 24.3 bits (52), Expect = 4.6
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 18 PSSVAVREEFNITLTCKAEGF 38
P+SV+ +IT++C
Sbjct: 7 PASVSGSPGQSITVSCTGVSS 27
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion molecule-1
(MADCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 23.9 bits (50), Expect = 4.7
Identities = 5/47 (10%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Query: 95 FWEIIFHMHYGEQLNITKISRTEMGAYLCIATNNVPPSVSKRITVDV 141
+ L + S + G +C+ + + + + V
Sbjct: 44 SLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGG-RTFQHTVQLLV 89
>d2bnub1 b.1.1.1 (B:2-113) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 24.3 bits (52), Expect = 4.8
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 17 TPSSVAVREEFNITLTCKA 35
TP ++ ++TL C
Sbjct: 5 TPKFQVLKTGQSMTLQCAQ 23
>d1w72l1 b.1.1.1 (L:1-107) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 5 [TaxId: 9606]}
Length = 109
Score = 23.9 bits (51), Expect = 4.9
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 14/81 (17%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRRED-------------NQPISINKRKKVHMH 64
P SV+V +TC + + W ++ ++P I +R
Sbjct: 7 PPSVSVAPGQTARITCGGNNIGSRSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNS 66
Query: 65 -YGEQLNITKISRTEMGAYLC 84
L I+++ + Y C
Sbjct: 67 GNMATLTISRVEAGDEADYYC 87
>d1k5nb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 23.8 bits (51), Expect = 5.5
Identities = 7/47 (14%), Positives = 12/47 (25%), Gaps = 6/47 (12%)
Query: 7 VPPNILDTESTPSSVAVREEFNITLTCKAEGFPAPEI--KWRREDNQ 51
P I + + L C GF +I + +
Sbjct: 4 RTPKI--QVYSRHPAENGKS--NFLNCYVSGFHPSDIEVDLLKNGER 46
>d1muja1 b.1.1.2 (A:84-183) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-A group [TaxId: 10090]}
Length = 100
Score = 23.8 bits (51), Expect = 5.7
Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 14/101 (13%)
Query: 6 SVPPNILDTESTPSSVAVREEFNITLTCKAEGF--PAPEIKWRREDNQPISINKRKKVHM 63
+ P T S V + + TL C + P I W R +++ ++ +
Sbjct: 1 NEAPQA--TVFPKSPVLLGQP--NTLICFVDNIFPPVINITWLR-NSKSVADGVYETSFF 55
Query: 64 HYGE----QLNITKISRTEMGAYLCIATKIG---PLKIFWE 97
+ +L+ ++ Y C G P+ W
Sbjct: 56 VNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWS 96
>d8faba1 b.1.1.1 (A:3-105) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 5 [TaxId: 9606]}
Length = 103
Score = 23.9 bits (51), Expect = 5.8
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 18 PSSVAVREEFNITLTCKAEGFPAPEIKWRR 47
P SV+V +TC A P W +
Sbjct: 5 PPSVSVSPGQTARITCSANALPNQYAYWYQ 34
>d1akjd_ b.1.1.1 (D:) CD8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 114
Score = 24.0 bits (51), Expect = 6.0
Identities = 6/51 (11%), Positives = 11/51 (21%), Gaps = 4/51 (7%)
Query: 17 TPSSVAVREEFNITLTCKAEGFP-APEIKWRREDNQPISINKRKKVHMHYG 66
+P + L C+ W QP ++
Sbjct: 6 SPLDRTWNLGETVELKCQVLLSNPTSGCSWLF---QPRGAAASPTFLLYLS 53
>d1mjuh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 116
Score = 23.9 bits (51), Expect = 6.2
Identities = 11/94 (11%), Positives = 23/94 (24%), Gaps = 16/94 (17%)
Query: 30 TLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISRTEMGAYLCIATKI 89
L+CKA G+ +P G+ L
Sbjct: 19 KLSCKASGYTFTNYWINWVKQRP-------------GQGLEWIGNIYPGSSYTHYNEKFK 65
Query: 90 GPLKIFWEIIFHMHYGEQLNITKISRTEMGAYLC 123
+ + Y + ++ ++ + Y C
Sbjct: 66 NKATLTVDTSSSTAY---MQLSSLTSDDSAVYYC 96
>d1bwwa_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable
domain, VL-kappa {Human (Homo sapiens), cluster 1
[TaxId: 9606]}
Length = 109
Score = 23.8 bits (51), Expect = 6.3
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKW 45
+PSS++ +T+TC+A + W
Sbjct: 9 SPSSLSASVGDRVTITCQASQDIIKYLNW 37
>d2fx7l1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Human (Homo sapiens),
cluster 3.2 [TaxId: 9606]}
Length = 108
Score = 23.6 bits (50), Expect = 6.5
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 17 TPSSVAVREEFNITLTCKA 35
+P + ++ TL+C+A
Sbjct: 7 SPGTQSLSPGERATLSCRA 25
>d1d5il1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 23.5 bits (50), Expect = 6.8
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRR 47
+PSS+ +T+TCKA + W +
Sbjct: 7 SPSSMYASLGERVTITCKASQDINSYLSWFQ 37
>d1l6xa2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 23.4 bits (50), Expect = 7.0
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 18 PSSVAVREEFNITLTCKAEGF--PAPEIKWRREDN 50
P S + ++LTC +GF ++W
Sbjct: 11 PPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQ 45
>d1c5db1 b.1.1.1 (B:1-117) Immunoglobulin heavy chain variable
domain, VH {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 117
Score = 23.9 bits (51), Expect = 7.1
Identities = 7/36 (19%), Positives = 10/36 (27%), Gaps = 2/36 (5%)
Query: 30 TLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHY 65
+LTC GFP P + +
Sbjct: 19 SLTCTVSGFPLTTNGVSWVRQPP--GKGLEWIAAIS 52
>d1hkfa_ b.1.1.1 (A:) NK cell activating receptor NKP44 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 108
Score = 23.7 bits (50), Expect = 7.2
Identities = 9/106 (8%), Positives = 26/106 (24%), Gaps = 18/106 (16%)
Query: 16 STPSSVAVREEFNITLTCKAEGFP---------------APEIKWRREDNQPISINKRKK 60
S + +T+ C+ + ++ R
Sbjct: 1 SKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFT 60
Query: 61 VHMHYGEQ---LNITKISRTEMGAYLCIATKIGPLKIFWEIIFHMH 103
+ + +T + + G Y C + + + F++
Sbjct: 61 IWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLV 106
>d1dr9a2 b.1.1.3 (A:106-200) CD80, second domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 95
Score = 23.3 bits (49), Expect = 7.2
Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 10/80 (12%)
Query: 8 PPNILDTESTPSSVAVREEFNITLTCKAEG-FPAPEIKWRREDNQPISINKRKKVH--MH 64
P+I D E S++ + C G FP P + W + +IN
Sbjct: 5 TPSISDFEIPTSNI-------RRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETE 57
Query: 65 YGEQLNITKISRTEMGAYLC 84
+ + T +++C
Sbjct: 58 LYAVSSKLDFNMTTNHSFMC 77
>d1u1ha1 c.1.22.2 (A:2-395)
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase MetE {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 394
Score = 24.2 bits (52), Expect = 7.3
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 81 AYLCIATKIGPLKIFWEIIFHMHYGEQLNI 110
AY + + + L + E F E
Sbjct: 224 AYAELESTLSGLNVLVETYFADIPAEAYKT 253
>d1yqvl1 b.1.1.1 (L:2-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 3.2 [TaxId: 10090]}
Length = 104
Score = 23.5 bits (50), Expect = 8.2
Identities = 9/69 (13%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAPEIKWRREDNQPISINKRKKVHMHYGEQLNITKISR 76
+P+ ++ +T+TC A + W ++ + S
Sbjct: 6 SPAIMSASPGEKVTMTCSASSS-VNYMYWYQQKSGTSPKRWIYDTSKLASGVPVRFSGSG 64
Query: 77 TEMGAYLCI 85
+ L I
Sbjct: 65 SGTSYSLTI 73
>d1st9a_ c.47.1.10 (A:) Thiol-disulfide oxidoreductase ResA
{Bacillus subtilis [TaxId: 1423]}
Length = 137
Score = 23.7 bits (49), Expect = 8.4
Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Query: 36 EGFPAPEIKWRREDNQPISIN--KRKKVHMHYGEQLNITKISRTEMGAYLCIATKIGPLK 93
EG AP + + I ++ K K V +++ A K ++
Sbjct: 1 EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVE 60
Query: 94 IFWEIIFHMHY 104
I +
Sbjct: 61 IVAVNVGESKI 71
>d1oaql_ b.1.1.1 (L:) Immunoglobulin light chain lambda variable
domain, VL-lambda {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 110
Score = 23.6 bits (50), Expect = 8.4
Identities = 7/51 (13%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 18 PSSVAVREEFNITLTCKAEG---FPAPEIKWRREDNQPISINKRKKVHMHY 65
S++ +TLTC++ + W +E + +
Sbjct: 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRA 57
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid
binding Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 121
Score = 23.6 bits (50), Expect = 8.5
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 17 TPSSVAVREEFNITLTCKAEGFPAP 41
SSV V+E + + C
Sbjct: 7 MQSSVTVQEGMCVHVRCSFSYPVDS 31
>d2aq2a1 b.1.1.1 (A:1-117) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 110
Score = 23.4 bits (50), Expect = 9.1
Identities = 4/22 (18%), Positives = 9/22 (40%)
Query: 17 TPSSVAVREEFNITLTCKAEGF 38
+P + +TL+C+
Sbjct: 7 SPRNKVAVTGEKVTLSCQQTNN 28
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 23.3 bits (49), Expect = 10.0
Identities = 3/55 (5%), Positives = 10/55 (18%), Gaps = 7/55 (12%)
Query: 94 IFWEIIFHMHYGEQLNITKISRTEMGAYLCIATNN-------VPPSVSKRITVDV 141
+ E + + C + + + S +
Sbjct: 48 LKREPAVGEPAEVTTTVLVRRDHHGAQFSCRTELDLRPQGLELFENTSAPYQLQT 102
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.133 0.396
Gapped
Lambda K H
0.267 0.0524 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 529,406
Number of extensions: 22567
Number of successful extensions: 308
Number of sequences better than 10.0: 1
Number of HSP's gapped: 290
Number of HSP's successfully gapped: 193
Length of query: 142
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 65
Effective length of database: 1,350,386
Effective search space: 87775090
Effective search space used: 87775090
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (22.7 bits)