BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15394
(523 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PA5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|2PA5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|4GE2|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE2|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE6|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
pdb|4GE6|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
Length = 314
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 202/300 (67%)
Query: 62 QGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTR 121
++I E V+ V ++ + G+ EYE + + P G+F + NL KNRY DV D TR
Sbjct: 9 HAMTIQELVDYVNARQKQGIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTR 68
Query: 122 VLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTR 181
V L+++ +DYINA+F+DGYKQKNA+I TQGP++NT DFW MVWEQ+ LVI+MTTR
Sbjct: 69 VKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTR 128
Query: 182 VIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHY 241
E GR KC QYWP + +++ G VT V + Y ++L + NT+ + R V H+
Sbjct: 129 FEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHF 188
Query: 242 QFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTG 301
QF +W DYGVP SA S+++FL R+ Q+ ++++G G PPI+VHCSAGIGRTG
Sbjct: 189 QFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTG 248
Query: 302 TLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISA 361
T C+LDIC+++LE+ GT++V TV R+R+QRA SIQ +QY FC+ A++E+A G++SA
Sbjct: 249 TFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKEGMVSA 308
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 80/109 (73%)
Query: 400 AAALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISR 459
++A S+++FL R Q+ ++++G G PPI+VHCSAGIGRTGT C+LDIC+++
Sbjct: 200 SSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQ 259
Query: 460 LEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISA 508
LE+ GT++V TV R+R+QRA SIQ +QY FC+ A++E+A G++SA
Sbjct: 260 LEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKEGMVSA 308
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/283 (43%), Positives = 169/283 (59%), Gaps = 20/283 (7%)
Query: 74 RSKGRSGLCLEYEGFKIKP-PDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPG 132
R K GL E I P ++E + N KNRY++V+AYDH+RV+L+ D VPG
Sbjct: 11 RLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPG 70
Query: 133 SDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQ 192
SDYINAN++DGY+++NA+I+TQGP+ T+ DFWRMVWEQ+T ++M TR+ E+ R KC Q
Sbjct: 71 SDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQ 130
Query: 193 YWP--GTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYG 250
YWP GTE + L T E T Y + + L + + E R + +QF AW D+G
Sbjct: 131 YWPARGTETCGLIQVTLLDTVELAT----YTVRTFALHKSGSSEKRELRQFQFMAWPDHG 186
Query: 251 VPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI 310
VPE +L FL R +A D G P++VHCSAG+GRTG +D +
Sbjct: 187 VPEYPTPILAFL---RRVKACNPLDAG----------PMVVHCSAGVGRTGCFIVIDAML 233
Query: 311 SRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
R++ TVD+ G V +RSQR + +Q DQY+F H AL+E A
Sbjct: 234 ERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAA 276
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 145/248 (58%), Gaps = 13/248 (5%)
Query: 105 NLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDF 164
N FKNR +++ Y+ TRV L V GSDYINA+F+DGY+Q+ A+I+TQGP+ + EDF
Sbjct: 332 NKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDF 391
Query: 165 WRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSS 224
WRM+WE + +I+M T++ E GR KC QYWP + + F+V + P Y+L
Sbjct: 392 WRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQY--FVVDPMAEYNMPQYILRE 449
Query: 225 LTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHP 284
+ + + ++R + +QFT W + GVP++ ++F+ + T+ D
Sbjct: 450 FKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQD--------- 500
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 344
PI VHCSAG+GRTG TL I + R+ G VD+ TVK +R+QR +Q DQY
Sbjct: 501 --GPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQL 558
Query: 345 CHLALIEY 352
C+ A +EY
Sbjct: 559 CYRAALEY 566
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
P++VHCSAG+GRTG +D + R++ TVD+ G V +RSQR + +Q DQY+F H
Sbjct: 211 PMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHE 270
Query: 495 ALIEYA 500
AL+E A
Sbjct: 271 ALLEAA 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
PI VHCSAG+GRTG TL I + R+ G VD+ TVK +R+QR +Q DQY C+
Sbjct: 502 PITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYR 561
Query: 495 ALIEY 499
A +EY
Sbjct: 562 AALEY 566
>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
Length = 299
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 170/291 (58%), Gaps = 22/291 (7%)
Query: 64 LSIAEFVEAVRSKGRSGLCLEYEGFKIKP-PDGSFEVAKRRENLFKNRYSDVLAYDHTRV 122
L +A+ +E +++ EYE I P ++E + N KNRY++V+AYDH+RV
Sbjct: 12 LELADHIERLKANDNLKFSQEYES--IDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRV 69
Query: 123 LLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRV 182
LLS + +PGSDY+NAN++DGY+++NA+I+TQG + T DFWRM+WEQ++ ++M T++
Sbjct: 70 LLSAIEGIPGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKL 129
Query: 183 IERGRNKCAQYWP--GTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAH 240
ER R KC QYWP GTE + L T E T Y + + L + E R V
Sbjct: 130 EERSRVKCDQYWPSRGTETHGLVQVTLLDTVELAT----YCVRTFALYKNGSSEKREVRQ 185
Query: 241 YQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT 300
+QFTAW D+GVPE L FL + + P P++VHCSAG+GRT
Sbjct: 186 FQFTAWPDHGVPEHPTPFLAFLRRVKTCNP-------------PDAGPMVVHCSAGVGRT 232
Query: 301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
G +D + R++ TVD+ G V +R+QR + +Q DQYIF H AL+E
Sbjct: 233 GCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLE 283
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P++VHCSAG+GRTG +D + R++ TVD+ G V +R+QR + +Q DQYI
Sbjct: 216 PDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYI 275
Query: 491 FCHLALIE 498
F H AL+E
Sbjct: 276 FIHDALLE 283
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 173/292 (59%), Gaps = 23/292 (7%)
Query: 66 IAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLS 125
+ + + +++ G EYE F + S++VAK+ +N KNRY +++AYDH+RV+L
Sbjct: 31 LLQHINLMKTSDSYGFKEEYESF-FEGQSASWDVAKKDQNRAKNRYGNIIAYDHSRVILQ 89
Query: 126 QQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIER 185
+D P SDYINAN++DGY++ + +I+TQGP+ TV DFWRM+W++Q+ I+M T ++E
Sbjct: 90 PVEDDPSSDYINANYIDGYQRPSHYIATQGPVHETVYDFWRMIWQEQSACIVMVTNLVEV 149
Query: 186 GRNKCAQYWP-GTEGTKMTHGDFLVTTECVTSSP--DYVLSSLTLCNTKTLETRMVAHYQ 242
GR KC +YWP TE +GDF VT CV P +YV+ + TL E R V +
Sbjct: 150 GRVKCYKYWPDDTE----VYGDFKVT--CVEMEPLAEYVVRTFTLERRGYNEIREVKQFH 203
Query: 243 FTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGT 302
FT W D+GVP A +L F+ + + + P PI+VHCSAG GRTG
Sbjct: 204 FTGWPDHGVPYHATGLLSFIRRVKLSNP-------------PSAGPIVVHCSAGAGRTGC 250
Query: 303 LCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 354
+DI + E G VD+ VK +RS+R + +Q +QYIF H A++E L
Sbjct: 251 YIVIDIMLDMAEREGVVDIYNCVKALRSRRINMVQTEEQYIFIHDAILEACL 302
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PI+VHCSAG GRTG +DI + E G VD+ VK +RS+R + +Q +QYI
Sbjct: 232 PSAGPIVVHCSAGAGRTGCYIVIDIMLDMAEREGVVDIYNCVKALRSRRINMVQTEEQYI 291
Query: 491 FCHLALIEYAL 501
F H A++E L
Sbjct: 292 FIHDAILEACL 302
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 184/315 (58%), Gaps = 33/315 (10%)
Query: 60 SSQGLSIAEFVEAV---RSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRYSDV 114
S + + + +FV+ + S + G ++E + D + E + EN KNRY ++
Sbjct: 6 SMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRSTADMNITAEHSNHPENKHKNRYINI 65
Query: 115 LAYDHTRVLLSQ--QDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQ 172
LAYDH+RV L D SDYINAN+VDGY + A+I+TQGP+++T EDFWRM+WEQ
Sbjct: 66 LAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQN 125
Query: 173 TLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKT 232
T +I+M T ++E+GR KC QYWP TE T+ +G+ +VT + Y + ++ NTK
Sbjct: 126 TGIIVMITNLVEKGRRKCDQYWP-TENTE-EYGNIIVTLKSTKIHACYTVRRFSIRNTKV 183
Query: 233 LE-----------TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWA 281
+ R+V Y +T W D GVPE AL +L F+ R + AA + + G
Sbjct: 184 KKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV---RRSSAARMPETG---- 236
Query: 282 GHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 341
P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +Q
Sbjct: 237 ------PVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQ 290
Query: 342 YIFCHLALIEYALSR 356
YIF H AL+E L +
Sbjct: 291 YIFIHDALLEAILGK 305
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +QYI
Sbjct: 233 PETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYI 292
Query: 491 FCHLALIEYALSR 503
F H AL+E L +
Sbjct: 293 FIHDALLEAILGK 305
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 176/319 (55%), Gaps = 22/319 (6%)
Query: 66 IAEFVEAVRSKGRSGLCLEYEGFKIKP-PDGSFEVAKRRENLFKNRYSDVLAYDHTRVLL 124
+AE +E +++ L EYE I P ++E + N KNRY++V+AYDH+RV+L
Sbjct: 19 MAEHMERLKANDSLKLSQEYES--IDPGQQFTWEHSNLEANKPKNRYANVIAYDHSRVIL 76
Query: 125 SQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIE 184
+ + GSDYINAN+VDGY+++NA+I+TQGP+ T DFWRMVWEQ++ ++M TR+ E
Sbjct: 77 QPLEGIMGSDYINANYVDGYRRQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRLEE 136
Query: 185 RGRNKCAQYWP--GTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ R KC QYWP GTE L T E T + + + +L + E R V H+Q
Sbjct: 137 KSRIKCDQYWPNRGTETYGFIQVTLLDTMELAT----FCVRTFSLHKNGSSEKREVRHFQ 192
Query: 243 FTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGT 302
FTAW D+GVPE L FL + + P PI+VHCSAG+GRTG
Sbjct: 193 FTAWPDHGVPEYPTPFLAFLRRVKTCNP-------------PDAGPIVVHCSAGVGRTGC 239
Query: 303 LCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAK 362
+D + R++ TVDV G V +RSQR + +Q DQY F H AL+E
Sbjct: 240 FIVIDAMLERIKTEKTVDVYGHVTLMRSQRNYMVQTEDQYGFIHEALLEAVGCGNTEVPA 299
Query: 363 PDLSGFQTSCATSRPGGHL 381
L + A PG H+
Sbjct: 300 RSLYTYIQKLAQVEPGEHV 318
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 143/248 (57%), Gaps = 13/248 (5%)
Query: 105 NLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDF 164
N FKNR ++L Y+ +RV L V GSDYINA+F+DGY+Q+ A+I+TQGP+ T EDF
Sbjct: 346 NKFKNRLVNILPYESSRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDF 405
Query: 165 WRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSS 224
WR +WE + +++M T++ E GR KC QYWP + + F+V + P Y+L
Sbjct: 406 WRALWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQY--FVVDPMAEYNMPQYILRE 463
Query: 225 LTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHP 284
+ + + ++R V +QFT W + G P+S ++F+ + T+ D
Sbjct: 464 FKVTDARDGQSRTVRQFQFTDWPEQGAPKSGEGFIDFIGQVHKTKEQFGQD--------- 514
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 344
PI VHCSAG+GRTG TL I + R+ G VD+ TVK +R+QR +Q D+Y F
Sbjct: 515 --GPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKVLRTQRPAMVQTEDEYQF 572
Query: 345 CHLALIEY 352
C A +EY
Sbjct: 573 CFQAALEY 580
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PI+VHCSAG+GRTG +D + R++ TVDV G V +RSQR + +Q DQY
Sbjct: 221 PDAGPIVVHCSAGVGRTGCFIVIDAMLERIKTEKTVDVYGHVTLMRSQRNYMVQTEDQYG 280
Query: 491 FCHLALIE 498
F H AL+E
Sbjct: 281 FIHEALLE 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
PI VHCSAG+GRTG TL I + R+ G VD+ TVK +R+QR +Q D+Y FC
Sbjct: 516 PISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKVLRTQRPAMVQTEDEYQFCFQ 575
Query: 495 ALIEY 499
A +EY
Sbjct: 576 AALEY 580
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 184/315 (58%), Gaps = 33/315 (10%)
Query: 60 SSQGLSIAEFVEAV---RSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRYSDV 114
S + + + +FV+ + S + G ++E + D + E + EN KNRY ++
Sbjct: 6 SMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINI 65
Query: 115 LAYDHTRVLLSQ--QDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQ 172
LAYDH+RV L D SDYINAN+VDGY + A+I+TQGP+++T EDFWRM+WEQ
Sbjct: 66 LAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQN 125
Query: 173 TLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKT 232
T +IIM T ++E+GR KC QYWP TE T+ +G+ +VT + Y + ++ NTK
Sbjct: 126 TGIIIMITNLVEKGRRKCDQYWP-TENTE-EYGNIIVTLKSTKIHACYTVRRFSIRNTKV 183
Query: 233 LE-----------TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWA 281
+ R+V Y +T W D GVPE AL +L F+ R + AA + + G
Sbjct: 184 KKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV---RRSSAARMPETG---- 236
Query: 282 GHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 341
P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +Q
Sbjct: 237 ------PVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQ 290
Query: 342 YIFCHLALIEYALSR 356
YIF H AL+E L +
Sbjct: 291 YIFIHDALLEAILGK 305
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +QYI
Sbjct: 233 PETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYI 292
Query: 491 FCHLALIEYALSR 503
F H AL+E L +
Sbjct: 293 FIHDALLEAILGK 305
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 174/319 (54%), Gaps = 22/319 (6%)
Query: 66 IAEFVEAVRSKGRSGLCLEYEGFKIKP-PDGSFEVAKRRENLFKNRYSDVLAYDHTRVLL 124
+AE E +++ L EYE I P ++E + N KNRY++V+AYDH+RV+L
Sbjct: 17 MAEHTERLKANDSLKLSQEYES--IDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVIL 74
Query: 125 SQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIE 184
+ + GSDYINAN+VDGY+++NA+I+TQGP+ T DFWRMVWEQ++ I+M TR+ E
Sbjct: 75 QPIEGIMGSDYINANYVDGYRRQNAYIATQGPLPETFGDFWRMVWEQRSATIVMMTRLEE 134
Query: 185 RGRNKCAQYWP--GTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ R KC QYWP GTE L T E T + + + +L + E R V +Q
Sbjct: 135 KSRIKCDQYWPNRGTETYGFIQVTLLDTIELAT----FCVRTFSLHKNGSSEKREVRQFQ 190
Query: 243 FTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGT 302
FTAW D+GVPE L FL + + P PI+VHCSAG+GRTG
Sbjct: 191 FTAWPDHGVPEYPTPFLAFLRRVKTCNP-------------PDAGPIVVHCSAGVGRTGC 237
Query: 303 LCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAK 362
+D + R++ TVDV G V +RSQR + +Q DQY F H AL+E
Sbjct: 238 FIVIDAMLERIKPEKTVDVYGHVTLMRSQRNYMVQTEDQYSFIHEALLEAVGCGNTEVPA 297
Query: 363 PDLSGFQTSCATSRPGGHL 381
L + A PG H+
Sbjct: 298 RSLYAYIQKLAQVEPGEHV 316
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 146/248 (58%), Gaps = 13/248 (5%)
Query: 105 NLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDF 164
N FKNR +++ Y+ TRV L V GSDYINA+F+DGY+Q+ A+I+TQGP+ T EDF
Sbjct: 344 NKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDF 403
Query: 165 WRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSS 224
WRM+WE + +++M T++ E GR KC QYWP + + F+V + P Y+L
Sbjct: 404 WRMLWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQY--FVVDPMAEYNMPQYILRE 461
Query: 225 LTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHP 284
+ + + ++R V +QFT W + GVP+S ++F+ + T+ D
Sbjct: 462 FKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQD--------- 512
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 344
PI VHCSAG+GRTG TL I + R+ G VD+ TVK +R+QR +Q D+Y F
Sbjct: 513 --GPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQF 570
Query: 345 CHLALIEY 352
C+ A +EY
Sbjct: 571 CYQAALEY 578
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PI+VHCSAG+GRTG +D + R++ TVDV G V +RSQR + +Q DQY
Sbjct: 219 PDAGPIVVHCSAGVGRTGCFIVIDAMLERIKPEKTVDVYGHVTLMRSQRNYMVQTEDQYS 278
Query: 491 FCHLALIE 498
F H AL+E
Sbjct: 279 FIHEALLE 286
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
PI VHCSAG+GRTG TL I + R+ G VD+ TVK +R+QR +Q D+Y FC+
Sbjct: 514 PISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQFCYQ 573
Query: 495 ALIEY 499
A +EY
Sbjct: 574 AALEY 578
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 184/315 (58%), Gaps = 33/315 (10%)
Query: 60 SSQGLSIAEFVEAV---RSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRYSDV 114
S + + + +FV+ + S + G ++E + D + E + EN KNRY ++
Sbjct: 6 SMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINI 65
Query: 115 LAYDHTRVLLSQ--QDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQ 172
LAYDH+RV L D SDYINAN+VDGY + A+I+TQGP+++T EDFWRM+WEQ
Sbjct: 66 LAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQN 125
Query: 173 TLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKT 232
T +I+M T ++E+GR KC QYWP TE ++ +G+ +VT + Y + ++ NTK
Sbjct: 126 TGIIVMITNLVEKGRRKCDQYWP-TENSE-EYGNIIVTLKSTKIHACYTVRRFSIRNTKV 183
Query: 233 LE-----------TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWA 281
+ R+V Y +T W D GVPE AL +L F+ R + AA + + G
Sbjct: 184 KKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV---RRSSAARMPETG---- 236
Query: 282 GHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 341
P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +Q
Sbjct: 237 ------PVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQ 290
Query: 342 YIFCHLALIEYALSR 356
YIF H AL+E L +
Sbjct: 291 YIFIHDALLEAILGK 305
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +QYI
Sbjct: 233 PETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYI 292
Query: 491 FCHLALIEYALSR 503
F H AL+E L +
Sbjct: 293 FIHDALLEAILGK 305
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 185/318 (58%), Gaps = 33/318 (10%)
Query: 57 GTSSSQGLSIAEFVEAV---RSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRY 111
GT + S+ +FV+ + S + G ++E + D + E + EN KNRY
Sbjct: 14 GTENLYFQSMKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRY 73
Query: 112 SDVLAYDHTRVLLSQQ--DDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVW 169
++LAYDH+RV L D SDYINAN+VDGY + A+I+TQGP+++T EDFWRM+W
Sbjct: 74 INILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIW 133
Query: 170 EQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCN 229
EQ T +I+M T ++E+GR KC QYWP TE ++ +G+ +VT + Y + ++ N
Sbjct: 134 EQNTGIIVMITNLVEKGRRKCDQYWP-TENSE-EYGNIIVTLKSTKIHACYTVRRFSIRN 191
Query: 230 TKTLE-----------TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
TK + R+V Y +T W D GVPE AL +L F+ R + AA + + G
Sbjct: 192 TKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV---RRSSAARMPETG- 247
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQM 338
P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q
Sbjct: 248 ---------PVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQT 298
Query: 339 RDQYIFCHLALIEYALSR 356
+QYIF H AL+E L +
Sbjct: 299 EEQYIFIHDALLEAILGK 316
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +QYI
Sbjct: 244 PETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYI 303
Query: 491 FCHLALIEYALSR 503
F H AL+E L +
Sbjct: 304 FIHDALLEAILGK 316
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 188/335 (56%), Gaps = 33/335 (9%)
Query: 63 GLSIAEFVEAV---RSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRYSDVLAY 117
+ + +FV+ + S + G ++E + D + E + EN KNRY ++LAY
Sbjct: 2 AIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAY 61
Query: 118 DHTRVLLSQQ--DDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLV 175
DH+RV L D SDYINAN+VDGY + A+I+TQGP+++T EDFWRM+WEQ T +
Sbjct: 62 DHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGI 121
Query: 176 IIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLE- 234
I+M T ++E+GR KC QYWP TE ++ +G+ +VT + Y + ++ NTK +
Sbjct: 122 IVMITNLVEKGRRKCDQYWP-TENSE-EYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKG 179
Query: 235 ----------TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHP 284
R+V Y +T W D GVPE AL +L F+ R + AA + + G
Sbjct: 180 QKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV---RRSSAARMPETG------- 229
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 344
P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +QYIF
Sbjct: 230 ---PVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIF 286
Query: 345 CHLALIEYALSRGLISAKPDLSGFQTSCATSRPGG 379
H AL+E L + + L + S GG
Sbjct: 287 IHDALLEAILGKETEVSSNQLHSYVNSILIPGVGG 321
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 28/273 (10%)
Query: 100 AKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQN 159
A++ N KNR S V+ + RV L+ + G+DYINA+++ GY + N FI TQ P+ +
Sbjct: 345 AQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPH 404
Query: 160 TVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTT-----ECV 214
T +DFWRM+W+ +I+M ++ YWP E + M F VT C+
Sbjct: 405 TTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFV-YWPSREES-MNCEAFTVTLISKDRLCL 462
Query: 215 TSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLA 274
++ ++ L T+ V H+Q W + P S+ L + K + AL
Sbjct: 463 SNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIK----EEALT- 517
Query: 275 DLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH 334
R P IVH G G LC L +LE+ VDV K I R
Sbjct: 518 ----------RDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPG 567
Query: 335 SIQMRDQYIFCHLALIEYALSRGLISAKPDLSG 367
+QY F + A++ L+S K + +G
Sbjct: 568 VFTDIEQYQFIYKAML------SLVSTKENGNG 594
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A P P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +
Sbjct: 223 ARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEE 282
Query: 488 QYIFCHLALIEYALSR 503
QYIF H AL+E L +
Sbjct: 283 QYIFIHDALLEAILGK 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
R P IVH G G LC L +LE+ VDV K I R +QY F
Sbjct: 518 RDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQF 577
Query: 492 CHLALIEYALSRGLISAKPDLSGFQTSDSD 521
+ A++ L+S K + +G T D +
Sbjct: 578 IYKAML------SLVSTKENGNGPMTVDKN 601
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 183/313 (58%), Gaps = 33/313 (10%)
Query: 62 QGLSIAEFVEAV---RSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRYSDVLA 116
+ + + +FV+ + S + G ++E + D + E + EN KNRY ++LA
Sbjct: 9 EAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILA 68
Query: 117 YDHTRVLLSQQ--DDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTL 174
YDH+RV L D SDYINAN+VDGY + A+I+TQGP+++T EDFWRM+WEQ T
Sbjct: 69 YDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTG 128
Query: 175 VIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLE 234
+I+M T ++E+GR KC QYWP TE ++ +G+ +VT + Y + ++ NTK +
Sbjct: 129 IIVMITNLVEKGRRKCDQYWP-TENSE-EYGNIIVTLKSTKIHACYTVRRFSIRNTKVKK 186
Query: 235 -----------TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGH 283
R+V Y +T W D GVPE AL +L F+ R + AA + + G
Sbjct: 187 GQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV---RRSSAARMPETG------ 237
Query: 284 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 343
P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +QYI
Sbjct: 238 ----PVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYI 293
Query: 344 FCHLALIEYALSR 356
F H AL+E L +
Sbjct: 294 FIHDALLEAILGK 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +QYI
Sbjct: 234 PETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYI 293
Query: 491 FCHLALIEYALSR 503
F H AL+E L +
Sbjct: 294 FIHDALLEAILGK 306
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 157/265 (59%), Gaps = 22/265 (8%)
Query: 95 GSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQ 154
G+FE+A + EN KNRY ++L DH+RV+LSQ D +P SDYINA+++DGYK+KN FI+ Q
Sbjct: 44 GTFELANKEENREKNRYPNILPNDHSRVILSQLDGIPCSDYINASYIDGYKEKNKFIAAQ 103
Query: 155 GPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECV 214
GP Q TV DFWRMVWEQ++ I+M T + ER KC QYWP +G T+G+ V E
Sbjct: 104 GPKQETVNDFWRMVWEQKSATIVMLTNLKERKEEKCHQYWPD-QGC-WTYGNIRVCVEDC 161
Query: 215 TSSPDYVLSSLTLCNTKTL-----ETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQ 269
DY + C L R+V+ FT+W D+GVP + + ML+FL K +
Sbjct: 162 VVLVDYTIRK--FCIQPQLPDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVK--- 216
Query: 270 AALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIR 329
L AG PI+VHCSAG+GRTGT +D ++ + VDV V RIR
Sbjct: 217 -----TLNPVHAG-----PIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIR 266
Query: 330 SQRAHSIQMRDQYIFCHLALIEYAL 354
+QR +Q QY F + AL+EY L
Sbjct: 267 NQRPQMVQTDMQYTFIYQALLEYYL 291
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 145/253 (57%), Gaps = 19/253 (7%)
Query: 105 NLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDF 164
N+ K R ++ YD RV+LS + +DYINA+F+DGY+QK+ FI+TQGP+ +TVEDF
Sbjct: 346 NMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDF 405
Query: 165 WRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP-----D 219
WRM+WE ++ I+M T V ER ++KC QYWP TEG+ +THG+ + + T S D
Sbjct: 406 WRMIWEWKSHTIVMLTEVQEREQDKCYQYWP-TEGS-VTHGEITIEIKNDTLSEAISIRD 463
Query: 220 YVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDT 279
++++ + + R+V + F W + G+P M++ +A + Q
Sbjct: 464 FLVTLNQPQARQGEQVRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQT------- 516
Query: 280 WAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMR 339
H PI VHCSAG GRTGT L + R++ G +DV VK +R QR H +Q
Sbjct: 517 -GNH----PITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTL 571
Query: 340 DQYIFCHLALIEY 352
+QY FC+ + ++
Sbjct: 572 EQYEFCYKVVQDF 584
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 403 LSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLED 462
+ ML+FL K + L AG PI+VHCSAG+GRTGT +D ++ +
Sbjct: 206 IGMLKFLKKVK--------TLNPVHAG-----PIVVHCSAGVGRTGTFIVIDAMMAMMHA 252
Query: 463 SGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 501
VDV V RIR+QR +Q QY F + AL+EY L
Sbjct: 253 EQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALLEYYL 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
PI VHCSAG GRTGT L + R++ G +DV VK +R QR H +Q +QY FC+
Sbjct: 520 PITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYK 579
Query: 495 ALIEY 499
+ ++
Sbjct: 580 VVQDF 584
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 159/275 (57%), Gaps = 19/275 (6%)
Query: 84 EYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDG 143
E+ P + E A + EN KNRY ++L YDH+RV L+ + VP SDYINA+F++G
Sbjct: 34 EFNALPACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFING 93
Query: 144 YKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMT 203
Y++KN FI+ QGP + TV DFWRM+WEQ T I+M T + ER KCAQYWP +G T
Sbjct: 94 YQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQYWPD-QGC-WT 151
Query: 204 HGDFLVTTECVTSSPDYVLSSLTLCN----TKTLETRMVAHYQFTAWLDYGVPESALSML 259
+G+ V+ E VT DY + + T R++ + FT+W D+GVP + + ML
Sbjct: 152 YGNVRVSVEDVTVLVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSWPDFGVPFTPIGML 211
Query: 260 EFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTV 319
+FL K + +AG I+VHCSAG+GRTGT +D + + V
Sbjct: 212 KFLKKVKACNPQ--------YAG-----AIVVHCSAGVGRTGTFVVIDAMLDMMHSERKV 258
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 354
DV G V RIR+QR +Q QY+F + AL+E+ L
Sbjct: 259 DVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYL 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 414 YTQASLLADLGDTWAGHPR-GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTV 472
+T +L L A +P+ I+VHCSAG+GRTGT +D + + VDV G V
Sbjct: 205 FTPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFV 264
Query: 473 KRIRSQRAHSIQMRDQYIFCHLALIEYAL 501
RIR+QR +Q QY+F + AL+E+ L
Sbjct: 265 SRIRAQRCQMVQTDMQYVFIYQALLEHYL 293
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 180/313 (57%), Gaps = 33/313 (10%)
Query: 62 QGLSIAEFVEAV---RSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRYSDVLA 116
+ + + +FV+ + S + G ++E + D + E + EN KNRY ++LA
Sbjct: 9 EAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADXNITAEHSNHPENKHKNRYINILA 68
Query: 117 YDHTRVLLSQ--QDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTL 174
YDH+RV L D SDYINAN+VDGY + A+I+TQGP+++T EDFWR +WEQ T
Sbjct: 69 YDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRXIWEQNTG 128
Query: 175 VIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLE 234
+I+ T ++E+GR KC QYWP TE ++ +G+ +VT + Y + ++ NTK +
Sbjct: 129 IIVXITNLVEKGRRKCDQYWP-TENSE-EYGNIIVTLKSTKIHACYTVRRFSIRNTKVKK 186
Query: 235 -----------TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGH 283
R+V Y +T W D GVPE AL +L F+ R + AA + G
Sbjct: 187 GQKGNPKGRQNERVVIQYHYTQWPDXGVPEYALPVLTFV---RRSSAARXPETG------ 237
Query: 284 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 343
P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +QYI
Sbjct: 238 ----PVLVHCSAGVGRTGTYIVIDSXLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYI 293
Query: 344 FCHLALIEYALSR 356
F H AL+E L +
Sbjct: 294 FIHDALLEAILGK 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A P P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +
Sbjct: 231 ARXPETGPVLVHCSAGVGRTGTYIVIDSXLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEE 290
Query: 488 QYIFCHLALIEYALSR 503
QYIF H AL+E L +
Sbjct: 291 QYIFIHDALLEAILGK 306
>pdb|2OOQ|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptprt
pdb|2OOQ|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptprt
Length = 286
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 170/300 (56%), Gaps = 26/300 (8%)
Query: 61 SQGLSIAEFVEAVRSKGRS---GLCLEYEGFKIKPPDG---SFEVAKRRENLFKNRYSDV 114
S + +A+ ++ + R G EYE P+G S++ AK EN KNRY ++
Sbjct: 1 SMAIRVADLLQHITQMKRGQGYGFKEEYEAL----PEGQTASWDTAKEDENRNKNRYGNI 56
Query: 115 LAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTL 174
++YDH+RV L D P SDYINAN++DGY + +I+TQGPMQ TV+DFWRM+W++ +
Sbjct: 57 ISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSA 116
Query: 175 VIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLE 234
I+M T ++E GR KC +YWP + T++ +GD VT +YV+ + T+ E
Sbjct: 117 SIVMVTNLVEVGRVKCVRYWP--DDTEV-YGDIKVTLIETEPLAEYVIRTFTVQKKGYHE 173
Query: 235 TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCS 294
R + + FT+W D+GVP A +L F+ + + P PI+VHCS
Sbjct: 174 IRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNP-------------PEAGPIVVHCS 220
Query: 295 AGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 354
AG GRTG +D + E+ G VD+ V+ +R+QR + +Q +QY+F H A++E L
Sbjct: 221 AGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDAILEACL 280
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PI+VHCSAG GRTG +D + E+ G VD+ V+ +R+QR + +Q +QY+
Sbjct: 210 PEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYV 269
Query: 491 FCHLALIEYAL 501
F H A++E L
Sbjct: 270 FVHDAILEACL 280
>pdb|1YGR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGU|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
pdb|1YGU|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
Length = 610
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 147/254 (57%), Gaps = 14/254 (5%)
Query: 100 AKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQN 159
A++ N KNRY D+L YD+ RV LS+ + GS+YINA+++DG+K+ +I+ QGP
Sbjct: 49 ARKPFNQNKNRYVDILPYDYNRVELSEINGDAGSNYINASYIDGFKEPRKYIAAQGPRDE 108
Query: 160 TVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPD 219
TV+DFWR +WEQ+ VI+ TR E RNKCA+YWP E GD +V PD
Sbjct: 109 TVDDFWRXIWEQKATVIVXVTRCEEGNRNKCAEYWPSXEEGTRAFGDVVVKINQHKRCPD 168
Query: 220 YVLSSLTLCNTKTLET-RMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
Y++ L + N K T R V H QFT+W D+GVPE +L+ R A +
Sbjct: 169 YIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKL---RRRVNA-----FSN 220
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQM 338
++G PI+VH SAG+GRTGT +D + LE VDV G V ++R QR +Q+
Sbjct: 221 FFSG-----PIVVHSSAGVGRTGTYIGIDAXLEGLEAENKVDVYGYVVKLRRQRCLXVQV 275
Query: 339 RDQYIFCHLALIEY 352
QYI H AL+EY
Sbjct: 276 EAQYILIHQALVEY 289
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 25/267 (9%)
Query: 99 VAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPG-------------------SDYINAN 139
+ + EN KNR S+V+ YD+ RV L + ++ S YINA+
Sbjct: 339 IGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDSEEPSKYINAS 398
Query: 140 FVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEG 199
F+ Y + I+ QGP++ T+ DFW+ +++++ VI+ T + + CAQYW EG
Sbjct: 399 FIXSYWKPEVXIAAQGPLKETIGDFWQXIFQRKVKVIVXLTELKHGDQEICAQYW--GEG 456
Query: 200 TKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSML 259
K T+GD V + S Y L L ++K ++R V YQ+T W +P ++
Sbjct: 457 -KQTYGDIEVDLKDTDKSSTYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELI 515
Query: 260 EFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTV 319
+ + + G+ H + P+++HC G +TG C L + E V
Sbjct: 516 SXIQVVKQKLPQKNSSEGNK---HHKSTPLLIHCRDGSQQTGIFCALLNLLESAETEEVV 572
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCH 346
D+ VK +R R + +QY F +
Sbjct: 573 DIFQVVKALRKARLGXVSTFEQYQFLY 599
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
PI+VH SAG+GRTGT +D + LE VDV G V ++R QR +Q+ QYI H
Sbjct: 225 PIVVHSSAGVGRTGTYIGIDAXLEGLEAENKVDVYGYVVKLRRQRCLXVQVEAQYILIHQ 284
Query: 495 ALIEY 499
AL+EY
Sbjct: 285 ALVEY 289
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 430 HPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQY 489
H + P+++HC G +TG C L + E VD+ VK +R R + +QY
Sbjct: 536 HHKSTPLLIHCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRKARLGXVSTFEQY 595
Query: 490 IFCH 493
F +
Sbjct: 596 QFLY 599
>pdb|1RPM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
pdb|1RPM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
Length = 278
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 151/275 (54%), Gaps = 17/275 (6%)
Query: 80 GLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINAN 139
G EYE F + ++ AK+ EN KNRY +++AYDH+RV L + SDYIN N
Sbjct: 21 GFKEEYESF-FEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGN 79
Query: 140 FVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEG 199
++DGY + N +I+TQGPMQ T+ DFWRMVW + T IIM T ++E GR KC +YWP
Sbjct: 80 YIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTE 139
Query: 200 TKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSML 259
L+ TE + +YV+ + + E R + + FT W D+GVP A +L
Sbjct: 140 IYKDIKVTLIETELLA---EYVIRTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLL 196
Query: 260 EFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTV 319
F+ + + P P++VHCSAG GRTG +DI + E G V
Sbjct: 197 GFVRQVKSKSP-------------PSAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVV 243
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 354
D+ V+ +RS+R + +Q +QY+F H A++E L
Sbjct: 244 DIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 278
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P++VHCSAG GRTG +DI + E G VD+ V+ +RS+R + +Q +QY+
Sbjct: 208 PSAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYV 267
Query: 491 FCHLALIEYAL 501
F H A++E L
Sbjct: 268 FIHDAILEACL 278
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 160/283 (56%), Gaps = 13/283 (4%)
Query: 81 LCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANF 140
L EYE K + S ++A EN KNRY+++L YD TRV LS DD P SDYINA++
Sbjct: 43 LSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLSNVDDDPCSDYINASY 102
Query: 141 VDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGT 200
+ G + +I TQGP+ T +DFW+MVWEQ I+M T+ +E+GR KC YWP + +
Sbjct: 103 IPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDS 162
Query: 201 KMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLET-RMVAHYQFTAWLDYGVPESALSML 259
+ +GD ++ + P++ + +C + L+ R++ H+ +T W D+GVPE+ S++
Sbjct: 163 -LYYGDLILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLI 221
Query: 260 EFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTV 319
+F+ R D P P +VHCSAG+GRTGT LD + +L+ +V
Sbjct: 222 QFVRTVR-----------DYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSV 270
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAK 362
D+ G V +R R H +Q QY++ H + + +R L S +
Sbjct: 271 DIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRARKLRSEQ 313
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P +VHCSAG+GRTGT LD + +L+ +VD+ G V +R R H +Q QY+
Sbjct: 235 PGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQYV 294
Query: 491 FCHLALIEYALSRGLISAK 509
+ H + + +R L S +
Sbjct: 295 YLHQCVRDVLRARKLRSEQ 313
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 159/281 (56%), Gaps = 13/281 (4%)
Query: 81 LCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANF 140
L EYE K + S ++A EN KNRY+++L YD TRV LS DD P SDYINA++
Sbjct: 27 LSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLSNVDDDPCSDYINASY 86
Query: 141 VDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGT 200
+ G + +I TQGP+ T +DFW+MVWEQ I+M T+ +E+GR KC YWP + +
Sbjct: 87 IPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDS 146
Query: 201 KMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLET-RMVAHYQFTAWLDYGVPESALSML 259
+ +GD ++ + P++ + +C + L+ R++ H+ +T W D+GVPE+ S++
Sbjct: 147 -LYYGDLILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLI 205
Query: 260 EFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTV 319
+F+ R D P P +VHCSAG+GRTGT LD + +L+ +V
Sbjct: 206 QFVRTVR-----------DYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSV 254
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLIS 360
D+ G V +R R H +Q QY++ H + + +R L S
Sbjct: 255 DIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRARKLRS 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P +VHCSAG+GRTGT LD + +L+ +VD+ G V +R R H +Q QY+
Sbjct: 219 PGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQYV 278
Query: 491 FCHLALIEYALSRGLIS 507
+ H + + +R L S
Sbjct: 279 YLHQCVRDVLRARKLRS 295
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 166/309 (53%), Gaps = 22/309 (7%)
Query: 69 FVEAVRSKGRSGLCLEYEGFK---IKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLS 125
+ + ++ G EYE K I P + E+A EN KNRY++VL YD +RV LS
Sbjct: 34 YFKKQQADSNCGFAEEYEDLKLIGISLPKYAAEIA---ENRGKNRYNNVLPYDISRVKLS 90
Query: 126 QQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIER 185
Q DYINAN++ GY K FI+TQGP+ NT++DFWRMVWE+ I+M T+ +E+
Sbjct: 91 VQTH-STDDYINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIVMLTKCVEQ 149
Query: 186 GRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTA 245
GR KC +YWP + +GD V P++ + + N ++ E+ + + FT+
Sbjct: 150 GRTKCEEYWPSKQA--QDYGDITVAMTSEVVLPEWTIRDFVVKNMQSSESHPLRQFHFTS 207
Query: 246 WLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCT 305
W D+GVP++ ++ F R + P PI+VHCSAG+GRTGT
Sbjct: 208 WPDHGVPDTTDLLINFRYLVRDYMKQI-----------PPESPILVHCSAGVGRTGTFIA 256
Query: 306 LDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAKPDL 365
+D I ++E+ TVDV G V +R R +Q DQY+F + +++ + R +K DL
Sbjct: 257 IDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLD--IIRAQKDSKVDL 314
Query: 366 SGFQTSCAT 374
T+ T
Sbjct: 315 IYQNTTAMT 323
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PI+VHCSAG+GRTGT +D I ++E+ TVDV G V +R R +Q DQY+
Sbjct: 235 PPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYV 294
Query: 491 FCHLALIEYALSRGLISAKPDL 512
F + +++ + R +K DL
Sbjct: 295 FLNQCVLD--IIRAQKDSKVDL 314
>pdb|2NZ6|A Chain A, Crystal Structure Of The Ptprj Inactivating Mutant C1239s
Length = 316
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 163/300 (54%), Gaps = 22/300 (7%)
Query: 69 FVEAVRSKGRSGLCLEYEGFK---IKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLS 125
+ + ++ G EYE K I P + E+A EN KNRY++VL YD +RV LS
Sbjct: 34 YFKKQQADSNCGFAEEYEDLKLVGISQPKYAAELA---ENRGKNRYNNVLPYDISRVKLS 90
Query: 126 QQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIER 185
Q DYINAN++ GY K FI+TQGP+ NT++DFWRMVWE+ IIM T+ +E+
Sbjct: 91 VQTH-STDDYINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQ 149
Query: 186 GRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTA 245
GR KC +YWP + +GD V P++ + T+ N +T E+ + + FT+
Sbjct: 150 GRTKCEEYWPSKQAQD--YGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQFHFTS 207
Query: 246 WLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCT 305
W D+GVP++ ++ F R D P PI+VH SAG+GRTGT
Sbjct: 208 WPDHGVPDTTDLLINFRYLVR-----------DYMKQSPPESPILVHSSAGVGRTGTFIA 256
Query: 306 LDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAKPDL 365
+D I ++E+ TVDV G V +R R +Q DQY+F + +++ + R +K DL
Sbjct: 257 IDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLD--IVRSQKDSKVDL 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PI+VH SAG+GRTGT +D I ++E+ TVDV G V +R R +Q DQY+
Sbjct: 235 PPESPILVHSSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYV 294
Query: 491 FCHLALIEYALSRGLISAKPDL 512
F + +++ + R +K DL
Sbjct: 295 FLNQCVLD--IVRSQKDSKVDL 314
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 163/300 (54%), Gaps = 22/300 (7%)
Query: 69 FVEAVRSKGRSGLCLEYEGFK---IKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLS 125
+ + ++ G EYE K I P + E+A EN KNRY++VL YD +RV LS
Sbjct: 34 YFKKQQADSNCGFAEEYEDLKLVGISQPKYAAELA---ENRGKNRYNNVLPYDISRVKLS 90
Query: 126 QQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIER 185
Q DYINAN++ GY K FI+TQGP+ NT++DFWRMVWE+ IIM T+ +E+
Sbjct: 91 VQTH-STDDYINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQ 149
Query: 186 GRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTA 245
GR KC +YWP + +GD V P++ + T+ N +T E+ + + FT+
Sbjct: 150 GRTKCEEYWPSKQAQD--YGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQFHFTS 207
Query: 246 WLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCT 305
D+GVP++ ++ F R D P PI+VHCSAG+GRTGT
Sbjct: 208 APDHGVPDTTDLLINFRYLVR-----------DYMKQSPPESPILVHCSAGVGRTGTFIA 256
Query: 306 LDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAKPDL 365
+D I ++E+ TVDV G V +R R +Q DQY+F + +++ + R +K DL
Sbjct: 257 IDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLD--IVRSQKDSKVDL 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PI+VHCSAG+GRTGT +D I ++E+ TVDV G V +R R +Q DQY+
Sbjct: 235 PPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYV 294
Query: 491 FCHLALIEYALSRGLISAKPDL 512
F + +++ + R +K DL
Sbjct: 295 FLNQCVLD--IVRSQKDSKVDL 314
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 155/276 (56%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPSRVAKLPKNKNRNRYCDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NTV FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 54 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 109
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 110 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 169
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 170 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 227
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 228 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 276
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 277 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 312
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 224 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 272
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 273 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 312
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 156/279 (55%), Gaps = 18/279 (6%)
Query: 81 LCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANF 140
L EYE K + S ++A EN KNRY+++L YD TRV LS GSDYINA++
Sbjct: 29 LSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLS-----GGSDYINASY 83
Query: 141 VDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGT 200
+ G + +I TQGP+ T +DFW+MVWEQ I+M T+ +E+GR KC YWP + +
Sbjct: 84 IPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDS 143
Query: 201 KMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLET-RMVAHYQFTAWLDYGVPESALSML 259
+ +GD ++ + P++ + +C + L+ R++ H+ +T W D+GVPE+ S++
Sbjct: 144 -LYYGDLILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLI 202
Query: 260 EFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTV 319
+F+ R D P P +VHCSAG+GRTGT LD + +L+ +V
Sbjct: 203 QFVRTVR-----------DYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSV 251
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGL 358
D+ G V +R R H +Q QY++ H + + +R L
Sbjct: 252 DIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRARKL 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P P +VHCSAG+GRTGT LD + +L+ +VD+ G V +R R H +Q QY+
Sbjct: 216 PGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQYV 275
Query: 491 FCHLALIEYALSRGL 505
+ H + + +R L
Sbjct: 276 YLHQCVRDVLRARKL 290
>pdb|1P15|A Chain A, Crystal Structure Of The D2 Domain Of Rptpa
pdb|1P15|B Chain B, Crystal Structure Of The D2 Domain Of Rptpa
Length = 253
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 151/265 (56%), Gaps = 20/265 (7%)
Query: 105 NLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDF 164
N+ KNR ++ Y+ RV++ + +DY+NA+F+DGY+QK+++I++QGP+ +T+EDF
Sbjct: 9 NMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQGPLLHTIEDF 68
Query: 165 WRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSS 224
WRM+WE ++ I+M T + ERG+ KCAQYWP ++G +++GD V + Y +
Sbjct: 69 WRMIWEWKSCSIVMLTELEERGQEKCAQYWP-SDGL-VSYGDITVELKKEEECESYTVRD 126
Query: 225 LTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHP 284
L + NT+ ++R + + F W + G+P M+ +A + Q
Sbjct: 127 LLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQ------------QS 174
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 344
PI VHCSAG GRTGT C L + R++ G +DV TVK +R QR H +Q +QY F
Sbjct: 175 GNHPITVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLRLQRPHMVQTLEQYEF 234
Query: 345 CHLALIEYALSRGLISAKPDLSGFQ 369
C+ + EY I A D + F+
Sbjct: 235 CYKVVQEY------IDAFSDYANFK 253
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
PI VHCSAG GRTGT C L + R++ G +DV TVK +R QR H +Q +QY FC+
Sbjct: 178 PITVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLRLQRPHMVQTLEQYEFCYK 237
Query: 495 ALIEYALSRGLISAKPDLSGFQ 516
+ EY I A D + F+
Sbjct: 238 VVQEY------IDAFSDYANFK 253
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 26 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 81
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 82 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 141
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 142 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 199
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 200 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 248
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 249 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 196 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 244
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 32 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 87
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 88 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSVKCAQYWPQKEEKEMIF 147
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 148 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 205
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 206 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 254
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 255 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 202 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 250
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 251 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 27 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 82
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 83 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 142
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 143 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 200
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 201 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 249
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 250 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 285
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 197 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 245
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 246 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 285
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 32 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 87
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 88 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 147
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 148 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 205
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 206 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 254
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 255 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 202 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 250
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 251 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 22 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 77
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 78 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 137
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 138 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 195
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 196 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 244
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 280
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 192 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 240
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 241 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 280
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 26 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 81
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 82 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 141
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 142 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 199
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 200 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 248
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 249 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 196 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 244
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 19 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 74
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 75 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 134
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 135 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 192
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 193 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 241
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 242 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 277
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 189 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 237
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 238 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 277
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 24 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 79
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 80 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 139
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 140 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 197
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 198 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 246
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 247 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 194 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 242
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 282
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 32 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 87
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 88 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 147
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 148 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 205
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 206 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 254
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 255 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 202 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 250
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 251 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 152/274 (55%), Gaps = 20/274 (7%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GDFLVTTECVTSSPD--YVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFL 262
D + ++ Y + L L N T ETR + H+ +T W D+GVPES S L FL
Sbjct: 136 EDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFL 195
Query: 263 AKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSGTV 319
K R + + P P++VHCSAGIGR+GT C D C+ + +D +V
Sbjct: 196 FKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSV 244
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
D++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 DIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 152/274 (55%), Gaps = 20/274 (7%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GDFLVTTECVTSSPD--YVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFL 262
D + ++ Y + L L N T ETR + H+ +T W D+GVPES S L FL
Sbjct: 136 EDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFL 195
Query: 263 AKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSGTV 319
K R + + P P++VHCSAGIGR+GT C D C+ + +D +V
Sbjct: 196 FKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSV 244
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
D++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 DIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 152/274 (55%), Gaps = 20/274 (7%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY +V +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYVNVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GDFLVTTECVTSSPD--YVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFL 262
D + ++ Y + L L N T ETR + H+ +T W D+GVPES S L FL
Sbjct: 136 EDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFL 195
Query: 263 AKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSGTV 319
K R + + P P++VHCSAGIGR+GT C D C+ + +D +V
Sbjct: 196 FKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSV 244
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
D++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 DIKKVLLDMRKFRCQLIQTADQLRFSYLAVIEGA 278
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRCQLIQTADQLRFSYLAVIEGA 278
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 155/263 (58%), Gaps = 22/263 (8%)
Query: 100 AKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFVDGY-----KQKNAFIST 153
+R EN KNRY ++L +DH+RV+L +D ++PGSDYINAN++ + +I++
Sbjct: 265 GQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIAS 324
Query: 154 QGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTEC 213
QG ++ TV DFW+M W++ + VI+MTTR +E+GRNKC YWP G + +G + VT
Sbjct: 325 QGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEV-GMQRAYGPYSVTNCG 383
Query: 214 VTSSPDYVLSSLTLCNTKTLE-TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAAL 272
+ +Y L +L + + R + HYQ+ +W D+GVP +L FL + Q +L
Sbjct: 384 EHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESL 443
Query: 273 LADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGT---VDVRGTVKRIR 329
P PIIVHCSAGIGRTGT+ +D+ + + G +D++ T++ +R
Sbjct: 444 -----------PHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVR 492
Query: 330 SQRAHSIQMRDQYIFCHLALIEY 352
+QR+ +Q QY F ++A+ ++
Sbjct: 493 AQRSGMVQTEAQYKFIYVAIAQF 515
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 14/98 (14%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG 464
+L FL + Q SL P PIIVHCSAGIGRTGT+ +D+ + + G
Sbjct: 429 VLSFLDQINQRQESL-----------PHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKG 477
Query: 465 T---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
+D++ T++ +R+QR+ +Q QY F ++A+ ++
Sbjct: 478 LDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQF 515
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ +Q F +LA+IE A
Sbjct: 243 SVDIKKVLLDMRKFRMGLIQTAEQLRFSYLAVIEGA 278
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ +Q F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRMGLIQTAEQLRFSYLAVIEGA 278
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ +Q F +LA+IE A
Sbjct: 243 SVDIKKVLLDMRKFRMGLIQTAEQLRFSYLAVIEGA 278
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ +Q F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRMGLIQTAEQLRFSYLAVIEGA 278
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 155/263 (58%), Gaps = 22/263 (8%)
Query: 100 AKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFVDGY-----KQKNAFIST 153
+R EN KNRY ++L +DH+RV+L +D ++PGSDYINAN++ + +I++
Sbjct: 23 GQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIAS 82
Query: 154 QGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTEC 213
QG ++ TV DFW+M W++ + VI+MTTR +E+GRNKC YWP G + +G + VT
Sbjct: 83 QGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEV-GMQRAYGPYSVTNCG 141
Query: 214 VTSSPDYVLSSLTLCNTKTLE-TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAAL 272
+ +Y L +L + + R + HYQ+ +W D+GVP +L FL + Q +L
Sbjct: 142 EHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESL 201
Query: 273 LADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGT---VDVRGTVKRIR 329
P PIIVHCSAGIGRTGT+ +D+ + + G +D++ T++ +R
Sbjct: 202 -----------PHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVR 250
Query: 330 SQRAHSIQMRDQYIFCHLALIEY 352
+QR+ +Q QY F ++A+ ++
Sbjct: 251 AQRSGMVQTEAQYKFIYVAIAQF 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 14/98 (14%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG 464
+L FL + Q SL P PIIVHCSAGIGRTGT+ +D+ + + G
Sbjct: 187 VLSFLDQINQRQESL-----------PHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKG 235
Query: 465 T---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
+D++ T++ +R+QR+ +Q QY F ++A+ ++
Sbjct: 236 LDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQF 273
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 164/287 (57%), Gaps = 26/287 (9%)
Query: 79 SGLCLEYEGFK---IKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSD 134
SG E+E + +K E +R EN KNRY ++L +DH+RV+L +D ++PGSD
Sbjct: 22 SGFWEEFESLQKQEVKNLHQRLE-GQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSD 80
Query: 135 YINANFVDGY-----KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNK 189
YINAN++ + +I++QG ++ TV DFW+M W++ + VI+MTTR +E+GRNK
Sbjct: 81 YINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNK 140
Query: 190 CAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLE-TRMVAHYQFTAWLD 248
C YWP G + +G + VT + +Y L +L + + R + HYQ+ +W D
Sbjct: 141 CVPYWPEV-GMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPD 199
Query: 249 YGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDI 308
+GVP +L FL + Q +L P PIIVHCSAGIGRTGT+ +D+
Sbjct: 200 HGVPSEPGGVLSFLDQINQRQESL-----------PHAGPIIVHCSAGIGRTGTIIVIDM 248
Query: 309 CISRLEDSGT---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 352
+ + G +D++ T++ +R+QR+ +Q QY F ++A+ ++
Sbjct: 249 LMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQF 295
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 14/98 (14%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG 464
+L FL + Q SL P PIIVHCSAGIGRTGT+ +D+ + + G
Sbjct: 209 VLSFLDQINQRQESL-----------PHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKG 257
Query: 465 T---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
+D++ T++ +R+QR+ +Q QY F ++A+ ++
Sbjct: 258 LDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQF 295
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 152/274 (55%), Gaps = 20/274 (7%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY +V +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYVNVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GDFLVTTECVTSSPD--YVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFL 262
D + ++ Y + L L N T ETR + H+ +T W D+GVPES S L FL
Sbjct: 136 EDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFL 195
Query: 263 AKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSGTV 319
K R + + P P++VHCSAGIGR+GT C D C+ + +D +V
Sbjct: 196 FKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSV 244
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
D++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 DIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1G1F|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Tri-Phosphorylated Peptide (Rdi(Ptr)
Etd(Ptr)(Ptr)rk) From The Insulin Receptor Kinase
pdb|1G1G|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Mono-Phosphorylated Peptide (Etdy(Ptr)
Rkggkgll) From The Insulin Receptor Kinase
pdb|1G1H|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Bis-Phosphorylated Peptide
(Etd(Ptr)(Ptr) Rkggkgll) From The Insulin Receptor
Kinase
pdb|2B4S|A Chain A, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|C Chain C, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
Length = 298
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VH SAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHASAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHASAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 166/302 (54%), Gaps = 27/302 (8%)
Query: 100 AKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFVDGY-----KQKNAFIST 153
+R EN KNRY ++L +DH+RV+L +D ++PGSDYINAN++ + +I++
Sbjct: 265 GQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIAS 324
Query: 154 QGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTEC 213
QG ++ TV DFW+M W++ + VI+MTTR +E+GRNKC YWP G + +G + VT
Sbjct: 325 QGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEV-GMQRAYGPYSVTNCG 383
Query: 214 VTSSPDYVLSSLTLCNTKTLE-TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAAL 272
+ +Y L +L + + R + HYQ+ +W D+GVP +L FL + Q +L
Sbjct: 384 EHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESL 443
Query: 273 LADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG---TVDVRGTVKRIR 329
P PIIVH SAGIGRTGT+ +D+ + + G +D++ T++ +R
Sbjct: 444 -----------PHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVR 492
Query: 330 SQRAHSIQMRDQYIFCHLALIEYALSRGLISAKPDLSGFQTSCATSRPGGHLGRAPAGAP 389
+QR+ +Q QY F ++A+ ++ + + K L Q+ G++ PA
Sbjct: 493 AQRSGMVQTEAQYKFIYVAIAQF-----IETTKKKLEVLQSQKGQESEYGNITYPPAMKN 547
Query: 390 NH 391
H
Sbjct: 548 AH 549
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG 464
+L FL + Q SL P PIIVH SAGIGRTGT+ +D+ + + G
Sbjct: 429 VLSFLDQINQRQESL-----------PHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKG 477
Query: 465 ---TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
+D++ T++ +R+QR+ +Q QY F ++A+ ++
Sbjct: 478 LDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQF 515
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 155/300 (51%), Gaps = 20/300 (6%)
Query: 55 PTGTS-SSQGLSIAEFVEAVR---SKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNR 110
P G+ +S+ + I F E R + E+E K D A N KNR
Sbjct: 16 PRGSHMASRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNR 75
Query: 111 YSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWE 170
++++L YDH+R L DD GSDYINAN+V G+ FI TQGP+ +T +DFWRM WE
Sbjct: 76 FTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWE 135
Query: 171 QQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNT 230
+ I+M TR E+GR KC QYWP + + +GD V + D+V++ LC
Sbjct: 136 SNSRAIVMLTRCFEKGREKCDQYWP-NDTVPVFYGDIKVQILNDSHYADWVMTEFMLC-- 192
Query: 231 KTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPII 290
+ E R++ H+ FT W D+GVP +++ F+ R A PI+
Sbjct: 193 RGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGA-------------EQRPIV 239
Query: 291 VHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALI 350
VHCSAG+GR+GT TLD + ++ S VD+ G V +R +R +Q QYI H L+
Sbjct: 240 VHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL 299
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
PI+VHCSAG+GR+GT TLD + ++ S VD+ G V +R +R +Q QYI H
Sbjct: 237 PIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQ 296
Query: 495 ALI 497
L+
Sbjct: 297 CLL 299
>pdb|1EEN|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-D-A-D-Bpa-Ptyr-L-I-P-Q-Q-G
pdb|1EEO|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-E-L-E-F-Ptyr-M-D-Y-E-Nh2
pdb|1PTY|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Phosphotyrosine Molecules
Length = 321
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VH SAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1AAX|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Bis(Para-Phosphophenyl)methane (Bppm)
Molecules
Length = 321
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VH SAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 154/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T + D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTFPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1I57|A Chain A, Crystal Structure Of Apo Human Ptp1b (C215s) Mutant
Length = 310
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 32 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 87
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 88 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 147
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 148 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 205
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VH SAGIGR+GT C D C+ + +D
Sbjct: 206 FLFKVRESGSL-----------SPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPS 254
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 255 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 202 SFLNFLFKVR-----------ESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKR 250
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 251 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
>pdb|1PTU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Hexa-Peptide
(Dadepyl-Nh2)
pdb|1PTT|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Tetra-Peptide
(Ac-Depyl-Nh2)
Length = 321
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 151/274 (55%), Gaps = 20/274 (7%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GDFLVTTECVTSSPD--YVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFL 262
D + ++ Y + L L N T ETR + H+ +T W D+GVPES S L FL
Sbjct: 136 EDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFL 195
Query: 263 AKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSGTV 319
K R + + P P++VH SAGIGR+GT C D C+ + +D +V
Sbjct: 196 FKVRESGSL-----------SPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPSSV 244
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
D++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 DIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1OEO|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To Sulfonic
Acid
pdb|1OET|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEU|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEV|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
Length = 321
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VH SAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|3EU0|A Chain A, Crystal Structure Of The S-Nitrosylated Cys215 Of Ptp1b
Length = 327
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 26 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 81
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 82 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 141
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 142 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 199
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VH SAGIGR+GT C D C+ + +D
Sbjct: 200 FLFKVRESGSL-----------SPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKRKDPS 248
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 249 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 196 SFLNFLFKVR-----------ESGSLSPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKR 244
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 26 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 81
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G K AQYWP E +M
Sbjct: 82 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKWAQYWPQKEEKEMIF 141
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 142 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 199
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VHCSAGIGR+GT C D C+ + +D
Sbjct: 200 FLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPS 248
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 249 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VHCSAGIGR+GT C D C+ +
Sbjct: 196 SFLNFLFKVR-----------ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR 244
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
>pdb|3ZV2|A Chain A, Human Protein-Tyrosine Phosphatase 1b C215a, S216a Mutant
Length = 320
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VH +AGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHAAAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH +AGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHAAAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|1PA1|A Chain A, Crystal Structure Of The C215d Mutant Of Protein Tyrosine
Phosphatase 1b
Length = 310
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 32 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 87
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 88 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 147
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 148 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 205
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VH SAGIGR+GT C D C+ + +D
Sbjct: 206 FLFKVRESGSL-----------SPEHGPVVVHDSAGIGRSGTFCLADTCLLLMDKRKDPS 254
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 255 SVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 202 SFLNFLFKVR-----------ESGSLSPEHGPVVVHDSAGIGRSGTFCLADTCLLLMDKR 250
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 251 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 290
>pdb|1PTV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine
Length = 321
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 151/274 (55%), Gaps = 20/274 (7%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GDFLVTTECVTSSPD--YVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFL 262
D + ++ Y + L L N T ETR + H+ +T W D+GVPES S L FL
Sbjct: 136 EDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFL 195
Query: 263 AKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSGTV 319
K R + + P P++VH SAGIGR+GT C D C+ + +D +V
Sbjct: 196 FKVRESGSL-----------SPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPSSV 244
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
D++ + +R R IQ DQ F +LA+IE A
Sbjct: 245 DIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEGA 278
>pdb|4GRY|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GRZ|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Po4
Length = 288
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 163/287 (56%), Gaps = 26/287 (9%)
Query: 79 SGLCLEYEGFK---IKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSD 134
SG E+E + +K E +R EN KNRY ++L +DH+RV+L +D ++PGSD
Sbjct: 2 SGFWEEFESLQKQEVKNLHQRLE-GQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSD 60
Query: 135 YINANFVDGY-----KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNK 189
YINAN++ + +I++QG ++ TV DFW+M W++ + VI+MTTR +E+GRNK
Sbjct: 61 YINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNK 120
Query: 190 CAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLE-TRMVAHYQFTAWLD 248
C YWP G + +G + VT + +Y L +L + + R + HYQ+ +W D
Sbjct: 121 CVPYWPEV-GMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPD 179
Query: 249 YGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDI 308
+GVP +L FL + Q +L P PIIVH SAGIGRTGT+ +D+
Sbjct: 180 HGVPSEPGGVLSFLDQINQRQESL-----------PHAGPIIVHSSAGIGRTGTIIVIDM 228
Query: 309 CISRLEDSGT---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 352
+ + G +D++ T++ +R+QR+ +Q QY F ++A+ ++
Sbjct: 229 LMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQF 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG 464
+L FL + Q SL P PIIVH SAGIGRTGT+ +D+ + + G
Sbjct: 189 VLSFLDQINQRQESL-----------PHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKG 237
Query: 465 T---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
+D++ T++ +R+QR+ +Q QY F ++A+ ++
Sbjct: 238 LDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQF 275
>pdb|1FPR|A Chain A, Crystal Structure Of The Complex Formed Between The
Catalytic Domain Of Shp-1 And An In Vitro Peptide
Substrate Py469 Derived From Shps-1
Length = 284
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 154/263 (58%), Gaps = 22/263 (8%)
Query: 100 AKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFVDGY-----KQKNAFIST 153
+R EN KNRY ++L +DH+RV+L +D ++PGSDYINAN++ + +I++
Sbjct: 23 GQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIAS 82
Query: 154 QGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTEC 213
QG ++ TV DFW+M W++ + VI+MTTR +E+GRNKC YWP G + +G + VT
Sbjct: 83 QGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEV-GMQRAYGPYSVTNCG 141
Query: 214 VTSSPDYVLSSLTLCNTKTLE-TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAAL 272
+ +Y L +L + + R + HYQ+ +W D+GVP +L FL + Q +L
Sbjct: 142 EHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESL 201
Query: 273 LADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGT---VDVRGTVKRIR 329
P PIIVH SAGIGRTGT+ +D+ + + G +D++ T++ +R
Sbjct: 202 -----------PHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVR 250
Query: 330 SQRAHSIQMRDQYIFCHLALIEY 352
+QR+ +Q QY F ++A+ ++
Sbjct: 251 AQRSGMVQTEAQYKFIYVAIAQF 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG 464
+L FL + Q SL P PIIVH SAGIGRTGT+ +D+ + + G
Sbjct: 187 VLSFLDQINQRQESL-----------PHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKG 235
Query: 465 T---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
+D++ T++ +R+QR+ +Q QY F ++A+ ++
Sbjct: 236 LDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQF 273
>pdb|1A5Y|A Chain A, Protein Tyrosine Phosphatase 1b Cysteinyl-Phosphate
Intermediate
Length = 330
Score = 187 bits (476), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 152/276 (55%), Gaps = 24/276 (8%)
Query: 85 YEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGY 144
Y+ + + D VAK +N +NRY DV +DH+R+ L Q+D+ DYINA+ +
Sbjct: 20 YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDN----DYINASLIKME 75
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQYWP E +M
Sbjct: 76 EAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIF 135
Query: 205 GD----FLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
D + +E + S Y + L L N T ETR + H+ +T W D+GVPES S L
Sbjct: 136 EDTNLKLTLISEDIKSY--YTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLN 193
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRLEDSG 317
FL K R + + P P++VH SAGIGR+GT C D C+ + +D
Sbjct: 194 FLFKVRESGSL-----------SPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKRKDPS 242
Query: 318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+VD++ + +R R I +Q F +LA+IE A
Sbjct: 243 SVDIKKVLLDMRKFRMGLIATAEQLRFSYLAVIEGA 278
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI---SRL 460
S L FL K R ++ + P P++VH SAGIGR+GT C D C+ +
Sbjct: 190 SFLNFLFKVR-----------ESGSLSPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKR 238
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+D +VD++ + +R R I +Q F +LA+IE A
Sbjct: 239 KDPSSVDIKKVLLDMRKFRMGLIATAEQLRFSYLAVIEGA 278
>pdb|3O5X|A Chain A, Crystal Structure Of The Oncogenic Tyrosine Phosphatase
Shp2 Complexed With A Salicylic Acid-Based Small
Molecule Inhibitor
pdb|3MOW|A Chain A, Crystal Structure Of Shp2 In Complex With A Tautomycetin
Analog Ttn D- 1
Length = 276
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 155/266 (58%), Gaps = 25/266 (9%)
Query: 100 AKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFV--------DGYKQKNAF 150
+R+EN KNRY ++L +DHTRV+L D + P SDYINAN + + K K ++
Sbjct: 8 GQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSY 67
Query: 151 ISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVT 210
I+TQG +QNTV DFWRMV+++ + VI+MTT+ +ERG++KC +YWP K +G V
Sbjct: 68 IATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALK-EYGVMRVR 126
Query: 211 TECVTSSPDYVLSSLTLCNTKTLET-RMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQ 269
+++ DY L L L T R V Y F W D+GVP +L+FL + H Q
Sbjct: 127 NVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQ 186
Query: 270 AALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGT---VDVRGTVK 326
+++ D G P++VHCSAGIGRTGT +DI I + + G +DV T++
Sbjct: 187 ESIM-DAG----------PVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQ 235
Query: 327 RIRSQRAHSIQMRDQYIFCHLALIEY 352
+RSQR+ +Q QY F ++A+ Y
Sbjct: 236 MVRSQRSGMVQTEAQYRFIYMAVQHY 261
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 14/98 (14%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG 464
+L+FL + + Q S++ D G P++VHCSAGIGRTGT +DI I + + G
Sbjct: 175 VLDFLEEVHHKQESIM-DAG----------PVVVHCSAGIGRTGTFIVIDILIDIIREKG 223
Query: 465 T---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
+DV T++ +RSQR+ +Q QY F ++A+ Y
Sbjct: 224 VDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHY 261
>pdb|3B7O|A Chain A, Crystal Structure Of The Human Tyrosine Phosphatase Shp2
(Ptpn11) With An Accessible Active Site
Length = 316
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 173/311 (55%), Gaps = 31/311 (9%)
Query: 57 GTSSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPD--GSFEVAKRRENLFKNRYSDV 114
GT + S+AE + V+ G E+E + + S + +R+EN KNRY ++
Sbjct: 14 GTENLYFQSMAETTDKVKQ----GFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNI 69
Query: 115 LAYDHTRVLLSQQD-DVPGSDYINANFV--------DGYKQKNAFISTQGPMQNTVEDFW 165
L +DHTRV+L D + P SDYINAN + + K K ++I+TQG +QNTV DFW
Sbjct: 70 LPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFW 129
Query: 166 RMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSL 225
RMV+++ + VI+MTT+ +ERG++KC +YWP K +G V +++ DY L L
Sbjct: 130 RMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALK-EYGVMRVRNVKESAAHDYTLREL 188
Query: 226 TLCNTKTLET-RMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHP 284
L T R V Y F W D+GVP +L+FL + H Q +++ D G
Sbjct: 189 KLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIM-DAG------- 240
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGT---VDVRGTVKRIRSQRAHSIQMRDQ 341
P++VHCSAGIGRTGT +DI I + + G +DV T++ +RSQR+ +Q Q
Sbjct: 241 ---PVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQ 297
Query: 342 YIFCHLALIEY 352
Y F ++A+ Y
Sbjct: 298 YRFIYMAVQHY 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 14/98 (14%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG 464
+L+FL + + Q S++ D G P++VHCSAGIGRTGT +DI I + + G
Sbjct: 222 VLDFLEEVHHKQESIM-DAG----------PVVVHCSAGIGRTGTFIVIDILIDIIREKG 270
Query: 465 T---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
+DV T++ +RSQR+ +Q QY F ++A+ Y
Sbjct: 271 VDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHY 308
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 154/266 (57%), Gaps = 25/266 (9%)
Query: 100 AKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFV--------DGYKQKNAF 150
+R+EN KNRY ++L +DHTRV+L D + P SDYINAN + + K K ++
Sbjct: 268 GQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSY 327
Query: 151 ISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVT 210
I+TQG +QNTV DFWRMV+++ + VI+MTT+ +ERG++KC +YWP K +G V
Sbjct: 328 IATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALK-EYGVMRVR 386
Query: 211 TECVTSSPDYVLSSLTLCNTKTLET-RMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQ 269
+++ DY L L L T R V Y F W D+GVP +L+FL + H Q
Sbjct: 387 NVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQ 446
Query: 270 AALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGT---VDVRGTVK 326
+++ D G P++VHCSAGIGRTGT +DI I + + G +DV T++
Sbjct: 447 ESIM-DAG----------PVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQ 495
Query: 327 RIRSQRAHSIQMRDQYIFCHLALIEY 352
+RSQR+ +Q QY ++A+ Y
Sbjct: 496 MVRSQRSGMVQTEAQYRSIYMAVQHY 521
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 14/98 (14%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG 464
+L+FL + + Q S++ D G P++VHCSAGIGRTGT +DI I + + G
Sbjct: 435 VLDFLEEVHHKQESIM-DAG----------PVVVHCSAGIGRTGTFIVIDILIDIIREKG 483
Query: 465 T---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
+DV T++ +RSQR+ +Q QY ++A+ Y
Sbjct: 484 VDCDIDVPKTIQMVRSQRSGMVQTEAQYRSIYMAVQHY 521
>pdb|1L8K|A Chain A, T Cell Protein-Tyrosine Phosphatase Structure
Length = 314
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 146/262 (55%), Gaps = 18/262 (6%)
Query: 94 DGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFIST 153
D VAK EN +NRY DV YDH+RV L ++ DYINA+ VD + + ++I T
Sbjct: 31 DYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAEN----DYINASLVDIEEAQRSYILT 86
Query: 154 QGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGD--FLVTT 211
QGP+ NT FW MVW+Q+T ++M R++E+ KCAQYWP T+ +M + F V
Sbjct: 87 QGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWP-TDDQEMLFKETGFSVKL 145
Query: 212 ECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAA 271
Y + L L N + ETR ++H+ +T W D+GVPES S L FL K R + +
Sbjct: 146 LSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRES-GS 204
Query: 272 LLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQ 331
L D G P ++HCSAGIGR+GT +D C+ +E ++++ + +R
Sbjct: 205 LNPDHG----------PAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKY 254
Query: 332 RAHSIQMRDQYIFCHLALIEYA 353
R IQ DQ F ++A+IE A
Sbjct: 255 RMGLIQTPDQLRFSYMAIIEGA 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS 463
S L FL K R + SL D G P ++HCSAGIGR+GT +D C+ +E
Sbjct: 191 SFLNFLFKVRES-GSLNPDHG----------PAVIHCSAGIGRSGTFSLVDTCLVLMEKG 239
Query: 464 GTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
++++ + +R R IQ DQ F ++A+IE A
Sbjct: 240 DDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGA 276
>pdb|2PI7|A Chain A, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
pdb|2PI7|B Chain B, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
Length = 312
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 148/280 (52%), Gaps = 18/280 (6%)
Query: 69 FVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQD 128
+++ + L++E K+ D A N KNRY+++L YD +RV L +
Sbjct: 22 YIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPMNRCKNRYTNILPYDFSRVRLVSMN 81
Query: 129 DVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRN 188
+ GSDYINAN++ GY +I+TQGP+ T DFW+MV +Q++ +I+M T+ E+ R
Sbjct: 82 EEEGSDYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRV 141
Query: 189 KCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLD 248
KC YWP TE + +GD V D+V + + E + V H+ +TAW D
Sbjct: 142 KCDHYWPFTEDP-IAYGDITVEMLSEEEHTDWVYRNFRISYAD--EVQDVMHFNYTAWPD 198
Query: 249 YGVP--ESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTL 306
+GVP +A S+L+F+ R +G P+I+HCSAG+GRTGT L
Sbjct: 199 HGVPTANAAESILQFVQMVRQKSVK------------SKG-PMIIHCSAGVGRTGTFIAL 245
Query: 307 DICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
D + + D VD+ G V +RS R +Q +QYIF H
Sbjct: 246 DWLLQHIRDHEFVDILGLVSDMRSYRMSMVQTEEQYIFIH 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 401 AALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRL 460
AA S+L+F+ R Q S+ + +GP +I+HCSAG+GRTGT LD + +
Sbjct: 206 AAESILQFVQMVR--QKSVKS----------KGP-MIIHCSAGVGRTGTFIALDWLLQHI 252
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 493
D VD+ G V +RS R +Q +QYIF H
Sbjct: 253 RDHEFVDILGLVSDMRSYRMSMVQTEEQYIFIH 285
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 148/279 (53%), Gaps = 17/279 (6%)
Query: 81 LCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANF 140
+ +++E K P + AK +NL KNRY DVL YD TRVLL +D + Y+N
Sbjct: 20 VLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNME- 78
Query: 141 VDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGT 200
+ N +I+TQGP+ +T FW++VW+Q+ +I+M T + ERGR KC QYWP
Sbjct: 79 IPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDV 138
Query: 201 KMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLE 260
M HG F + + + YV + + NT+T E V H Q+ AW D+GVP+ + LE
Sbjct: 139 -MNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLE 197
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVD 320
F+ R +L D P++VHCSAGIGRTG L T++ + E + +
Sbjct: 198 FVNYVR----SLRVD----------SEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIY 243
Query: 321 VRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLI 359
V+++R QRA +Q QY F A++ GL+
Sbjct: 244 PLDIVRKMRDQRAMMVQTSSQYKFVCEAILR-VYEEGLV 281
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
P++VHCSAGIGRTG L T++ + E + + V+++R QRA +Q QY F
Sbjct: 211 PVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSSQYKFVCE 270
Query: 495 ALIEYALSRGLI 506
A++ GL+
Sbjct: 271 AILR-VYEEGLV 281
>pdb|2QEP|A Chain A, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
pdb|2QEP|B Chain B, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
Length = 304
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 168/296 (56%), Gaps = 22/296 (7%)
Query: 61 SQGLSIAEFVEAVRSKGRSGLCLEYEGF--KIKPPDGSFEVAKRRENLFKNRYSDVLAYD 118
S G I ++E K ++ L E+E P+ SF VA+R EN+ KNR VL YD
Sbjct: 13 STGHMILSYMED-HLKNKNRLEKEWEALCAYQAEPNSSF-VAQREENVPKNRSLAVLTYD 70
Query: 119 HTRVLLSQQDDVPGSDYINANFVDGYKQKN-AFISTQGPMQNTVEDFWRMVWEQQTLVII 177
H+RVLL ++ SDYINA+ + + +N A+I+TQGP+ TV DFW+MVWE +VI+
Sbjct: 71 HSRVLLKAENSHSHSDYINASPIMDHDPRNPAYIATQGPLPATVADFWQMVWESGCVVIV 130
Query: 178 MTTRVIERGRNKCAQYWPGTEGTKMTH-GDFLVTTECVTSSPDYVLSSLTLCNTKTLETR 236
M T + E G +C YWP EG+ + H + + +E + D+++ S L N +T ETR
Sbjct: 131 MLTPLAENGVRQCYHYWPD-EGSNLYHIYEVNLVSEHIWCE-DFLVRSFYLKNLQTNETR 188
Query: 237 MVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAG 296
V + F +W D GVP S+ S+L+F K + + G R PIIVHCS G
Sbjct: 189 TVTQFHFLSWYDRGVPSSSRSLLDFRRK-----------VNKCYRG--RSCPIIVHCSDG 235
Query: 297 IGRTGTLCTLDICISRL-EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
GR+GT +D+ ++++ + + +D+ T++ +R QR +Q ++Q+ F A+ E
Sbjct: 236 AGRSGTYVLIDMVLNKMAKGAKEIDIAATLEHLRDQRPGMVQTKEQFEFALTAVAE 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICISRL-EDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
R PIIVHCS G GR+GT +D+ ++++ + + +D+ T++ +R QR +Q ++Q+
Sbjct: 224 RSCPIIVHCSDGAGRSGTYVLIDMVLNKMAKGAKEIDIAATLEHLRDQRPGMVQTKEQFE 283
Query: 491 FCHLALIE 498
F A+ E
Sbjct: 284 FALTAVAE 291
>pdb|2G59|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
pdb|2G59|B Chain B, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
Length = 297
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 147/280 (52%), Gaps = 18/280 (6%)
Query: 69 FVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQD 128
+++ + L++E K+ D A N KNRY+++L YD +RV L +
Sbjct: 15 YIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMN 74
Query: 129 DVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRN 188
+ G+DYINAN++ GY +I+TQGP+ T DFW+MV +Q++ +I+M T+ E+ R
Sbjct: 75 EEEGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRV 134
Query: 189 KCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLD 248
KC YWP TE + +GD V D+ + ++ V H+ +TAW D
Sbjct: 135 KCDHYWPFTE-EPIAYGDITVEMISEEEQDDWACRHFRINYADEMQD--VMHFNYTAWPD 191
Query: 249 YGVP--ESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTL 306
+GVP +A S+L+F+ R A +G P+I+HCSAG+GRTGT L
Sbjct: 192 HGVPTANAAESILQFVHMVRQQ------------ATKSKG-PMIIHCSAGVGRTGTFIAL 238
Query: 307 DICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
D + + D VD+ G V +RS R +Q +QYIF H
Sbjct: 239 DRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIH 278
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 493
P+I+HCSAG+GRTGT LD + + D VD+ G V +RS R +Q +QYIF H
Sbjct: 220 PMIIHCSAGVGRTGTFIALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIH 278
>pdb|2GJT|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptpro
pdb|2GJT|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptpro
Length = 295
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 147/280 (52%), Gaps = 18/280 (6%)
Query: 69 FVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQD 128
+++ + L++E K+ D A N KNRY+++L YD +RV L +
Sbjct: 13 YIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMN 72
Query: 129 DVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRN 188
+ G+DYINAN++ GY +I+TQGP+ T DFW+MV +Q++ +I+M T+ E+ R
Sbjct: 73 EEEGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRV 132
Query: 189 KCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLD 248
KC YWP TE + +GD V D+ + ++ V H+ +TAW D
Sbjct: 133 KCDHYWPFTE-EPIAYGDITVEMISEEEQDDWACRHFRINYADEMQD--VMHFNYTAWPD 189
Query: 249 YGVP--ESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTL 306
+GVP +A S+L+F+ R A +G P+I+HCSAG+GRTGT L
Sbjct: 190 HGVPTANAAESILQFVHMVRQQ------------ATKSKG-PMIIHCSAGVGRTGTFIAL 236
Query: 307 DICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
D + + D VD+ G V +RS R +Q +QYIF H
Sbjct: 237 DRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIH 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 493
P+I+HCSAG+GRTGT LD + + D VD+ G V +RS R +Q +QYIF H
Sbjct: 218 PMIIHCSAGVGRTGTFIALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIH 276
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 148/272 (54%), Gaps = 23/272 (8%)
Query: 84 EYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVD- 142
+++ K P + AK +N+ KNRY D+ YD TRV+L +D YINAN+++
Sbjct: 50 QFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVILKGNED-----YINANYINM 104
Query: 143 ---GYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEG 199
N +I+ QGP+ +T DFW+M WEQ + +++M T +ERGR KC QYWP G
Sbjct: 105 EIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTG 164
Query: 200 TKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSML 259
+ ++G + VT + Y+ +TL N + E+R + Q+ AW D+GVP+ + L
Sbjct: 165 SS-SYGCYQVTCHSEEGNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFL 223
Query: 260 EFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTV 319
+F+ R+ +A + P++VHCSAGIGRTG L T++ + +E + V
Sbjct: 224 DFVCHVRNKRAG-------------KEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPV 270
Query: 320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
V+ +R QRA IQ QY F A+++
Sbjct: 271 YPLDIVRTMRDQRAMMIQTPSQYRFVCEAILK 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 494
P++VHCSAGIGRTG L T++ + +E + V V+ +R QRA IQ QY F
Sbjct: 239 PVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCE 298
Query: 495 ALIE 498
A+++
Sbjct: 299 AILK 302
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 31/329 (9%)
Query: 37 EDAVKRVRFSDDDSLHADPT----GTSSSQGLSIAEFVEAVRSKGRSGL-CLEYEGFK-I 90
ED+ K F +D L P + G ++ + +R G+ E E + +
Sbjct: 2 EDSDKDHSFLTNDELAVLPVVKVLPSGKYTGANLKSVIRVLRGLLDQGIPSKELENLQEL 61
Query: 91 KPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVD--GYKQKN 148
KP D + + +EN KNRY ++L YD TRV L + YINA+F+ K++
Sbjct: 62 KPLDQCL-IGQTKENRRKNRYKNILPYDATRVPLGDE-----GGYINASFIKIPVGKEEF 115
Query: 149 AFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEG-TKMTHGDF 207
+I+ QGP+ TV DFW+M+WEQ++ VI M T+ +E + KC +YWP G T M
Sbjct: 116 VYIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRYWPNILGKTTMVSNRL 175
Query: 208 LVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARH 267
+ + +V+ ++TL + +T E R ++H FTAW D+ P +L F++ RH
Sbjct: 176 RLALVRMQQLKGFVVRAMTLEDIQTREVRHISHLNFTAWPDHDTPSQPDDLLTFISYMRH 235
Query: 268 TQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKR 327
R PII HCSAGIGR+GTL +D+ + + D+ V+
Sbjct: 236 IH---------------RSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRC 280
Query: 328 IRSQRAHSIQMRDQYIFCHLALIEYALSR 356
+R QR +Q DQYIFC+ +I Y L+R
Sbjct: 281 MRLQRHGMVQTEDQYIFCY-QVILYVLTR 308
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
R PII HCSAGIGR+GTL +D+ + + D+ V+ +R QR +Q DQYIF
Sbjct: 238 RSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQRHGMVQTEDQYIF 297
Query: 492 CHLALIEYALSR 503
C+ +I Y L+R
Sbjct: 298 CY-QVILYVLTR 308
>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
Phosphatase (heptp) Catalytic Domain
Length = 309
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 134/247 (54%), Gaps = 18/247 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWR 166
K+RY +L +RV L + DYINAN++ GY K +I+TQGPM NTV DFW
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWE 130
Query: 167 MVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLT 226
MVW+++ +I+M T++ E G+ KC YWP E T +G F + + + P+Y + LT
Sbjct: 131 MVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEET---YGPFQIRIQDMKECPEYTVRQLT 186
Query: 227 LCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRG 286
+ + E R V H F+AW D+ PESA +L +A+ + A HP
Sbjct: 187 IQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET---------AAHPG- 234
Query: 287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +QY F H
Sbjct: 235 -PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLH 293
Query: 347 LALIEYA 353
L YA
Sbjct: 294 HTLALYA 300
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A HP PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +
Sbjct: 230 AAHPG--PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAE 287
Query: 488 QYIFCHLALIEYA 500
QY F H L YA
Sbjct: 288 QYQFLHHTLALYA 300
>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
Tyrosine Phosphatase)
Length = 296
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 134/247 (54%), Gaps = 18/247 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWR 166
K+RY +L +RV L + DYINAN++ GY K +I+TQGPM NTV DFW
Sbjct: 60 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWE 119
Query: 167 MVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLT 226
MVW+++ +I+M T++ E G+ KC YWP E T +G F + + + P+Y + LT
Sbjct: 120 MVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEET---YGPFQIRIQDMKECPEYTVRQLT 175
Query: 227 LCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRG 286
+ + E R V H F+AW D+ PESA +L +A+ + A HP
Sbjct: 176 IQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET---------AAHPG- 223
Query: 287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +QY F H
Sbjct: 224 -PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLH 282
Query: 347 LALIEYA 353
L YA
Sbjct: 283 HTLALYA 289
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A HP PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +
Sbjct: 219 AAHPG--PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAE 276
Query: 488 QYIFCHLALIEYA 500
QY F H L YA
Sbjct: 277 QYQFLHHTLALYA 289
>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
Ordered E- Loop
pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
Partially Depleted Active Site
pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
Loop
Length = 308
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 134/247 (54%), Gaps = 18/247 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWR 166
K+RY +L +RV L + DYINAN++ GY K +I+TQGPM NTV DFW
Sbjct: 70 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWE 129
Query: 167 MVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLT 226
MVW+++ +I+M T++ E G+ KC YWP E T +G F + + + P+Y + LT
Sbjct: 130 MVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEET---YGPFQIRIQDMKECPEYTVRQLT 185
Query: 227 LCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRG 286
+ + E R V H F+AW D+ PESA +L +A+ + A HP
Sbjct: 186 IQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET---------AAHPG- 233
Query: 287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +QY F H
Sbjct: 234 -PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLH 292
Query: 347 LALIEYA 353
L YA
Sbjct: 293 HTLALYA 299
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A HP PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +
Sbjct: 229 AAHPG--PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAE 286
Query: 488 QYIFCHLALIEYA 500
QY F H L YA
Sbjct: 287 QYQFLHHTLALYA 299
>pdb|3D42|A Chain A, Crystal Structure Of Heptp In Complex With A
Monophosphorylated Erk2 Peptide
pdb|3D44|A Chain A, Crystal Structure Of Heptp In Complex With A Dually
Phosphorylated Erk2 Peptide Mimetic
Length = 308
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 134/247 (54%), Gaps = 18/247 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWR 166
K+RY D+L +RV L + DYINAN++ GY K +I+TQGPM NTV DFW
Sbjct: 70 KDRYKDILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWE 129
Query: 167 MVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLT 226
MVW+++ +I+M T++ E G+ KC YWP E T +G F + + + P+Y + LT
Sbjct: 130 MVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEET---YGPFQIRIQDMKECPEYTVRQLT 185
Query: 227 LCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRG 286
+ + E R V H F+AW D+ PESA +L +A+ + A HP
Sbjct: 186 IQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET---------AAHPG- 233
Query: 287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
PI+VH SAGIGRTG I +L+ G VD+ G V ++R R IQ +QY F H
Sbjct: 234 -PIVVHSSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLH 292
Query: 347 LALIEYA 353
L YA
Sbjct: 293 HTLALYA 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A HP PI+VH SAGIGRTG I +L+ G VD+ G V ++R R IQ +
Sbjct: 229 AAHPG--PIVVHSSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAE 286
Query: 488 QYIFCHLALIEYA 500
QY F H L YA
Sbjct: 287 QYQFLHHTLALYA 299
>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
Length = 309
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 134/247 (54%), Gaps = 18/247 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWR 166
K+RY +L +RV L + DYINAN++ GY K +I+TQGPM NTV DFW
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWE 130
Query: 167 MVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLT 226
MVW+++ +I+M T++ E G+ KC YWP E T +G F + + + P+Y + LT
Sbjct: 131 MVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEET---YGPFQIRIQDMKECPEYTVRQLT 186
Query: 227 LCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRG 286
+ + E R V H F+AW D+ PESA +L +A+ + A HP
Sbjct: 187 IQYQE--ERRDVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET---------AAHPG- 234
Query: 287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +QY F H
Sbjct: 235 -PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLH 293
Query: 347 LALIEYA 353
L YA
Sbjct: 294 HTLALYA 300
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A HP PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +
Sbjct: 230 AAHPG--PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAE 287
Query: 488 QYIFCHLALIEYA 500
QY F H L YA
Sbjct: 288 QYQFLHHTLALYA 300
>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
Mutant
Length = 309
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 133/247 (53%), Gaps = 18/247 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWR 166
K+RY +L +RV L + DYINAN++ GY K +I+TQGPM NTV DFW
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWE 130
Query: 167 MVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLT 226
MVW+++ +I+M T++ E G+ KC YWP E T +G F + + + P+Y + LT
Sbjct: 131 MVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEET---YGPFQIRIQDMKECPEYTVRQLT 186
Query: 227 LCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRG 286
+ + E R V H F+AW + PESA +L +A+ + A HP
Sbjct: 187 IQYQE--ERRSVKHILFSAWPAHQTPESAGPLLRLVAEVEESPET---------AAHPG- 234
Query: 287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +QY F H
Sbjct: 235 -PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLH 293
Query: 347 LALIEYA 353
L YA
Sbjct: 294 HTLALYA 300
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A HP PI+VHCSAGIGRTG I +L+ G VD+ G V ++R R IQ +
Sbjct: 230 AAHPG--PIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAE 287
Query: 488 QYIFCHLALIEYA 500
QY F H L YA
Sbjct: 288 QYQFLHHTLALYA 300
>pdb|2HVL|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant
pdb|2QDP|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant Crystallized In Ammonium Acetate
Length = 309
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 133/247 (53%), Gaps = 18/247 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWR 166
K+RY +L +RV L + DYINAN++ GY K +I+TQGPM NTV DFW
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWE 130
Query: 167 MVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLT 226
MVW+++ +I+M T++ E G+ KC YWP E T +G F + + + P+Y + LT
Sbjct: 131 MVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEET---YGPFQIRIQDMKECPEYTVRQLT 186
Query: 227 LCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRG 286
+ + E R V H F+AW D+ PESA +L +A+ + A HP
Sbjct: 187 IQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET---------AAHPG- 234
Query: 287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
PI+VH SAGIGRTG I +L+ G VD+ G V ++R R IQ +QY F H
Sbjct: 235 -PIVVHSSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLH 293
Query: 347 LALIEYA 353
L YA
Sbjct: 294 HTLALYA 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A HP PI+VH SAGIGRTG I +L+ G VD+ G V ++R R IQ +
Sbjct: 230 AAHPG--PIVVHSSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAE 287
Query: 488 QYIFCHLALIEYA 500
QY F H L YA
Sbjct: 288 QYQFLHHTLALYA 300
>pdb|2QCJ|A Chain A, Native Structure Of Lyp
pdb|2QCJ|B Chain B, Native Structure Of Lyp
pdb|2QCT|A Chain A, Structure Of Lyp With Inhibitor I-C11
pdb|2QCT|B Chain B, Structure Of Lyp With Inhibitor I-C11
Length = 313
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 133/256 (51%), Gaps = 18/256 (7%)
Query: 99 VAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQ 158
VA++ +N+ KNRY D+L YD++RV LS S YINANF+ G A+I+TQGP+
Sbjct: 67 VAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLS 126
Query: 159 NTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP 218
T+ DFWRM+WE L+I+M E G+ KC +YW ++ G F V+ E
Sbjct: 127 TTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKS 186
Query: 219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
DY++ +L + ETR + + + W D+ VP S +LE + R Q
Sbjct: 187 DYIIRTLKVKFNS--ETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQ--------- 235
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHS 335
PI +HCSAG GRTG +C +D L+D V ++ +R+QR
Sbjct: 236 ----EDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSL 291
Query: 336 IQMRDQYIFCHLALIE 351
+Q ++QY + A++E
Sbjct: 292 VQTQEQYELVYNAVLE 307
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
PI +HCSAG GRTG +C +D L+D V ++ +R+QR +Q ++QY
Sbjct: 241 PICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYEL 300
Query: 492 CHLALIE 498
+ A++E
Sbjct: 301 VYNAVLE 307
>pdb|2P6X|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
pdb|2P6X|B Chain B, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
Length = 309
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 133/256 (51%), Gaps = 18/256 (7%)
Query: 99 VAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQ 158
VA++ +N+ KNRY D+L YD++RV LS S YINANF+ G A+I+TQGP+
Sbjct: 48 VAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLS 107
Query: 159 NTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP 218
T+ DFWRM+WE L+I+M E G+ KC +YW ++ G F V+ E
Sbjct: 108 TTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKS 167
Query: 219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
DY++ +L + ETR + + + W D+ VP S +LE + R Q
Sbjct: 168 DYIIRTLKVKFNS--ETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQ--------- 216
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHS 335
PI +HCSAG GRTG +C +D L+D V ++ +R+QR
Sbjct: 217 ----EDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSL 272
Query: 336 IQMRDQYIFCHLALIE 351
+Q ++QY + A++E
Sbjct: 273 VQTQEQYELVYNAVLE 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
PI +HCSAG GRTG +C +D L+D V ++ +R+QR +Q ++QY
Sbjct: 222 PICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYEL 281
Query: 492 CHLALIE 498
+ A++E
Sbjct: 282 VYNAVLE 288
>pdb|3H2X|A Chain A, Crystal Structure Of The Human Lymphoid Tyrosine
Phosphatase Catalytic Domain
Length = 302
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 133/256 (51%), Gaps = 18/256 (7%)
Query: 99 VAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQ 158
VA++ +N+ KNRY D+L YD++RV LS S YINANF+ G A+I+TQGP+
Sbjct: 48 VAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLS 107
Query: 159 NTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP 218
T+ DFWRM+WE L+I+M E G+ KC +YW ++ G F V+ E
Sbjct: 108 TTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKS 167
Query: 219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
DY++ +L + ETR + + + W D+ VP S +LE + R Q
Sbjct: 168 DYIIRTLKVKFNS--ETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQ--------- 216
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHS 335
PI +HCSAG GRTG +C +D L+D V ++ +R+QR
Sbjct: 217 ----EDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSL 272
Query: 336 IQMRDQYIFCHLALIE 351
+Q ++QY + A++E
Sbjct: 273 VQTQEQYELVYNAVLE 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
PI +HCSAG GRTG +C +D L+D V ++ +R+QR +Q ++QY
Sbjct: 222 PICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYEL 281
Query: 492 CHLALIE 498
+ A++E
Sbjct: 282 VYNAVLE 288
>pdb|2OC3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Protein
Tyrosine Phosphatase Non-Receptor Type 18
Length = 303
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 153/299 (51%), Gaps = 37/299 (12%)
Query: 65 SIAEFVEAVRSKG-RSGLCLEYEGFKIKPPDGSFEV--------AKRRENLFKNRYSDVL 115
S F+E + ++G R G L E I+ +++ R EN+ KNRY DVL
Sbjct: 11 SARSFLERLEARGGREGAVLAGEFSDIQACSAAWKADGVCSTVAGSRPENVRKNRYKDVL 70
Query: 116 AYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLV 175
YD TRV+LS + SDYIN NF+ G A+I+TQGP+ +T+ DFWR+VWE V
Sbjct: 71 PYDQTRVILSLLQEEGHSDYINGNFIRGVDGSLAYIATQGPLPHTLLDFWRLVWEFGVKV 130
Query: 176 IIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVT-TECVTSSPDYVLSSLTLCNTKTLE 234
I+M R IE GR +C +YW E + G F +T + + D +L +L + K E
Sbjct: 131 ILMACREIENGRKRCERYW-AQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQK--E 187
Query: 235 TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGP-PIIVHC 293
+R V Q+ +W D GVP S ML + +AR Q + GP P+ VHC
Sbjct: 188 SRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQGS--------------GPEPLCVHC 233
Query: 294 SAGIGRTGTLCTLDICISRL------EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
SAG GRTG LCT+D L D DV V ++R QR ++Q +QY F +
Sbjct: 234 SAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDV---VLKMRKQRPAAVQTEEQYRFLY 289
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 24/96 (25%)
Query: 405 MLEFLAKARYTQASLLADLGDTWAGHPRGP-PIIVHCSAGIGRTGTLCTLDICISRL--- 460
ML + +AR Q S GP P+ VHCSAG GRTG LCT+D L
Sbjct: 211 MLAMVEEARRLQGS--------------GPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQ 256
Query: 461 ---EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 493
D DV V ++R QR ++Q +QY F +
Sbjct: 257 MIPPDFSLFDV---VLKMRKQRPAAVQTEEQYRFLY 289
>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 (step, Striatum Enriched Enriched
Phosphatase)
Length = 305
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 135/255 (52%), Gaps = 26/255 (10%)
Query: 108 KNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFVDGYK-QKNAFISTQGPMQNTVEDFW 165
KNRY +L H+RV L+ D D P S YINAN++ GY ++ +I+TQGP+ +TV DFW
Sbjct: 67 KNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFW 126
Query: 166 RMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSL 225
RMVW++ T +I+M T IE KC +YWP + + + +T + V + DY L +
Sbjct: 127 RMVWQEHTPIIVMITN-IEEMNEKCTEYWPEEQ---VAYDGVEITVQKVIHTEDYRLRLI 182
Query: 226 TLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPR 285
+L E R + HY FT+W D P+ A +L + + A
Sbjct: 183 SL--KSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEE-------------AAQQE 227
Query: 286 GP---PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQY 342
GP PIIVHCSAGIGRTG IC +L G VD+ T ++R R IQ +QY
Sbjct: 228 GPHCAPIIVHCSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQY 287
Query: 343 IFCH--LALIEYALS 355
F H ++L E LS
Sbjct: 288 QFVHHVMSLYEKQLS 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PIIVHCSAGIGRTG IC +L G VD+ T ++R R IQ +QY
Sbjct: 229 PHCAPIIVHCSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQ 288
Query: 491 FCH--LALIEYALS 502
F H ++L E LS
Sbjct: 289 FVHHVMSLYEKQLS 302
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 157/302 (51%), Gaps = 19/302 (6%)
Query: 68 EFVEAVRSKGRSGLCL-EYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRV-LLS 125
E ++ K G+ EYE K +G F A EN ++R +V+ Y+ RV L+
Sbjct: 33 ERFRTLKKKLEEGMVFTEYEQIPKKKANGIFSTAALPENAERSRIREVVPYEENRVELIP 92
Query: 126 QQDDVPGSDYINANFVDGY--KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVI 183
+++ G YINA+ + + +I+TQGP+ +T DFW+MVWEQ VI M T
Sbjct: 93 TKENNTG--YINASHIKVVVGGAEWHYIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEE 150
Query: 184 ERGRNKCAQYWP--GTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHY 241
E GR K +YWP G++ + T+G F VTT+ T S Y + L + + + + R V H
Sbjct: 151 EGGRTKSHRYWPKLGSKHSSATYGKFKVTTKFRTDSVCYATTGLKVKHLLSGQERTVWHL 210
Query: 242 QFTAWLDYGVPESALSMLEFLAKA----RHTQAALLADLGDTWAGHPRGPPIIVHCSAGI 297
Q+T W D+G PE L +L + RHT + L R PPI+VHCSAG+
Sbjct: 211 QYTDWPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTKN-------RHPPIVVHCSAGV 263
Query: 298 GRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRG 357
GRTG L ++ I LE + V+V ++ +R QR IQ QY F + LI++ +
Sbjct: 264 GRTGVLILSELMIYCLEHNEKVEVPMMLRLLREQRMFMIQTIAQYKFVYQVLIQFLQNSR 323
Query: 358 LI 359
LI
Sbjct: 324 LI 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 398 DRAAALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI 457
D LS LE + R S+L + R PPI+VHCSAG+GRTG L ++ I
Sbjct: 223 DVQGFLSYLEEIQSVRRHTNSMLEGTKN------RHPPIVVHCSAGVGRTGVLILSELMI 276
Query: 458 SRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLI 506
LE + V+V ++ +R QR IQ QY F + LI++ + LI
Sbjct: 277 YCLEHNEKVEVPMMLRLLREQRMFMIQTIAQYKFVYQVLIQFLQNSRLI 325
>pdb|3OLR|A Chain A, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|B Chain B, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|C Chain C, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|D Chain D, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OMH|A Chain A, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|B Chain B, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|C Chain C, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|D Chain D, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
Length = 313
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 132/256 (51%), Gaps = 18/256 (7%)
Query: 99 VAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQ 158
VA++ +N+ KNRY D+L YD++RV LS S YINANF+ G A+I+TQGP+
Sbjct: 67 VAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLS 126
Query: 159 NTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP 218
T+ DFWRM+WE L+I+M E G+ KC +YW ++ G F V+ E
Sbjct: 127 TTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKS 186
Query: 219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
DY++ +L + ETR + + + W D+ VP S +LE + R Q
Sbjct: 187 DYIIRTLKVKFNS--ETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQ--------- 235
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHS 335
PI +H SAG GRTG +C +D L+D V ++ +R+QR
Sbjct: 236 ----EDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSL 291
Query: 336 IQMRDQYIFCHLALIE 351
+Q ++QY + A++E
Sbjct: 292 VQTQEQYELVYNAVLE 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
PI +H SAG GRTG +C +D L+D V ++ +R+QR +Q ++QY
Sbjct: 241 PICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYEL 300
Query: 492 CHLALIE 498
+ A++E
Sbjct: 301 VYNAVLE 307
>pdb|2QDM|A Chain A, Crystal Structure Of The Heptp Catalytic Domain
C270sD236AQ314A Mutant
Length = 309
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 131/247 (53%), Gaps = 18/247 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWR 166
K+RY +L +RV L + DYINAN++ GY K +I+TQGPM NTV DFW
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWE 130
Query: 167 MVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLT 226
MVW+++ +I+M T++ E G+ KC YWP E T +G F + + + P+Y + LT
Sbjct: 131 MVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEET---YGPFQIRIQDMKECPEYTVRQLT 186
Query: 227 LCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRG 286
+ + E R V H F+AW + PESA +L +A+ + A HP
Sbjct: 187 IQYQE--ERRSVKHILFSAWPAHQTPESAGPLLRLVAEVEESPET---------AAHPG- 234
Query: 287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
PI+VH SAGIGRTG I +L+ G VD+ G V ++R R I +QY F H
Sbjct: 235 -PIVVHSSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIATAEQYQFLH 293
Query: 347 LALIEYA 353
L YA
Sbjct: 294 HTLALYA 300
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 487
A HP PI+VH SAGIGRTG I +L+ G VD+ G V ++R R I +
Sbjct: 230 AAHPG--PIVVHSSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIATAE 287
Query: 488 QYIFCHLALIEYA 500
QY F H L YA
Sbjct: 288 QYQFLHHTLALYA 300
>pdb|2CJZ|A Chain A, Crystal Structure Of The C472s Mutant Of Human Protein
Tyrosine Phosphatase Ptpn5 (Step, Striatum Enriched
Phosphatase) In Complex With Phosphotyrosine
Length = 305
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 134/255 (52%), Gaps = 26/255 (10%)
Query: 108 KNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFVDGYK-QKNAFISTQGPMQNTVEDFW 165
KNRY +L H+RV L+ D D P S YINAN++ GY ++ +I+TQGP+ +TV DFW
Sbjct: 67 KNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFW 126
Query: 166 RMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSL 225
RMVW++ T +I+M T IE KC +YWP + + + +T + V + DY L +
Sbjct: 127 RMVWQEHTPIIVMITN-IEEMNEKCTEYWPEEQ---VAYDGVEITVQKVIHTEDYRLRLI 182
Query: 226 TLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPR 285
+L E R + HY FT+W D P+ A +L + + A
Sbjct: 183 SL--KSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEE-------------AAQQE 227
Query: 286 GP---PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQY 342
GP PIIVH SAGIGRTG IC +L G VD+ T ++R R IQ +QY
Sbjct: 228 GPHCAPIIVHSSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQY 287
Query: 343 IFCH--LALIEYALS 355
F H ++L E LS
Sbjct: 288 QFVHHVMSLYEKQLS 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PIIVH SAGIGRTG IC +L G VD+ T ++R R IQ +QY
Sbjct: 229 PHCAPIIVHSSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQ 288
Query: 491 FCH--LALIEYALS 502
F H ++L E LS
Sbjct: 289 FVHHVMSLYEKQLS 302
>pdb|2BV5|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 At 1.8a Resolution
Length = 282
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 134/255 (52%), Gaps = 26/255 (10%)
Query: 108 KNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFVDGYK-QKNAFISTQGPMQNTVEDFW 165
KNRY +L H+RV L+ D D P S YINAN++ GY ++ +I+TQGP+ +TV DFW
Sbjct: 46 KNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFW 105
Query: 166 RMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSL 225
RMVW++ T +I+M T IE KC +YWP + + + +T + V + DY L +
Sbjct: 106 RMVWQEHTPIIVMITN-IEEMNEKCTEYWPEEQ---VAYDGVEITVQKVIHTEDYRLRLI 161
Query: 226 TLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPR 285
+L E R + HY FT+W D P+ A +L + + A
Sbjct: 162 SL--KSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEE-------------AAQQE 206
Query: 286 GP---PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQY 342
GP PIIVH SAGIGRTG IC +L G VD+ T ++R R IQ +QY
Sbjct: 207 GPHCAPIIVHXSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQY 266
Query: 343 IFCH--LALIEYALS 355
F H ++L E LS
Sbjct: 267 QFVHHVMSLYEKQLS 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
P PIIVH SAGIGRTG IC +L G VD+ T ++R R IQ +QY
Sbjct: 208 PHCAPIIVHXSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQ 267
Query: 491 FCH--LALIEYALS 502
F H ++L E LS
Sbjct: 268 FVHHVMSLYEKQLS 281
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 131/244 (53%), Gaps = 19/244 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPG-SDYINANFVDGYKQK-NAFISTQGPMQNTVEDFW 165
KNRY +L +RV L ++ S YINAN++ GY K AFI+TQGPM NTV DFW
Sbjct: 59 KNRYKTILPNPLSRVCLRPKNITDSLSTYINANYIRGYSGKEKAFIATQGPMINTVNDFW 118
Query: 166 RMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSL 225
+MVW++ + VI+M T++ E+ KC YWP G +G V VT +Y + +L
Sbjct: 119 QMVWQEDSPVIVMITKLKEKNE-KCVLYWPEKRGI---YGKVEVLVTGVTECDNYTIRNL 174
Query: 226 TLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPR 285
L + T+ V HY +T+W D+ P+SA +L+ + D A R
Sbjct: 175 VL--KQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEE----------DRLASEGR 222
Query: 286 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFC 345
GP ++VHCSAGIGRTG I +L++ G VD V ++R R +Q +QY F
Sbjct: 223 GP-VVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFV 281
Query: 346 HLAL 349
H AL
Sbjct: 282 HHAL 285
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 425 DTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 484
D A RGP ++VHCSAGIGRTG I +L++ G VD V ++R R +Q
Sbjct: 215 DRLASEGRGP-VVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVDRGGMVQ 273
Query: 485 MRDQYIFCHLAL 496
+QY F H AL
Sbjct: 274 TSEQYEFVHHAL 285
>pdb|3BRH|A Chain A, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
pdb|3BRH|B Chain B, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
Length = 310
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 131/256 (51%), Gaps = 18/256 (7%)
Query: 99 VAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQ 158
VA++ +N+ KNRY D+L YD++RV LS S YINANF+ G A+I+TQGP+
Sbjct: 48 VAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLS 107
Query: 159 NTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP 218
T+ DFWRM+WE L+I+M E G+ KC +YW ++ G F V+ E
Sbjct: 108 TTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKS 167
Query: 219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
DY++ +L + ETR + + + W + VP S +LE + R Q
Sbjct: 168 DYIIRTLKVKFNS--ETRTIYQFHYKNWPAHDVPSSIDPILELIWDVRCYQ--------- 216
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHS 335
PI +H SAG GRTG +C +D L+D V ++ +R+QR
Sbjct: 217 ----EDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSL 272
Query: 336 IQMRDQYIFCHLALIE 351
+Q ++QY + A++E
Sbjct: 273 VQTQEQYELVYNAVLE 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
PI +H SAG GRTG +C +D L+D V ++ +R+QR +Q ++QY
Sbjct: 222 PICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYEL 281
Query: 492 CHLALIE 498
+ A++E
Sbjct: 282 VYNAVLE 288
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 132/247 (53%), Gaps = 19/247 (7%)
Query: 108 KNRYSDVLAYDHTRVLLSQQDDVPG-SDYINANFVDGYKQK-NAFISTQGPMQNTVEDFW 165
KNRY +L +RV L ++ S YINAN++ GY K AFI+TQGPM NTV+DFW
Sbjct: 46 KNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMINTVDDFW 105
Query: 166 RMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSL 225
+MVW++ + VI+M T++ E+ KC YWP G +G V V +Y + +L
Sbjct: 106 QMVWQEDSPVIVMITKLKEKNE-KCVLYWPEKRGI---YGKVEVLVISVNECDNYTIRNL 161
Query: 226 TLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPR 285
L + T+ V HY +T+W D+ P+SA +L+ + D A R
Sbjct: 162 VL--KQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEE----------DRLASQGR 209
Query: 286 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFC 345
GP ++VHCSAGIGRTG I +L++ G VD V ++R R +Q +QY F
Sbjct: 210 GP-VVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFV 268
Query: 346 HLALIEY 352
H AL Y
Sbjct: 269 HHALCLY 275
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 425 DTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 484
D A RGP ++VHCSAGIGRTG I +L++ G VD V ++R R +Q
Sbjct: 202 DRLASQGRGP-VVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQ 260
Query: 485 MRDQYIFCHLALIEY 499
+QY F H AL Y
Sbjct: 261 TSEQYEFVHHALCLY 275
>pdb|2I1Y|A Chain A, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
pdb|2I1Y|B Chain B, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
Length = 301
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 135/249 (54%), Gaps = 16/249 (6%)
Query: 105 NLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINAN-FVDGYKQKNAFISTQGPMQNTVED 163
N+ KNR+ D L YDH R+ L + SDYINA+ ++ + A+I+TQGP+ +T+ D
Sbjct: 56 NIKKNRHPDFLPYDHARIKLKVESSPSRSDYINASPIIEHDPRMPAYIATQGPLSHTIAD 115
Query: 164 FWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLS 223
FW+MVWE VI+M T ++E G +C +YWP EG + H + D+++
Sbjct: 116 FWQMVWESGCTVIVMLTPLVEDGVKQCDRYWPD-EGASLYHVYEVNLVSEHIWCEDFLVR 174
Query: 224 SLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGH 283
S L N +T ETR + + F +W G P S +L+F K + + G
Sbjct: 175 SFYLKNVQTQETRTLTQFHFLSWPAEGTPASTRPLLDFRRK-----------VNKCYRG- 222
Query: 284 PRGPPIIVHCSAGIGRTGTLCTLDICISRL-EDSGTVDVRGTVKRIRSQRAHSIQMRDQY 342
R PIIVHCS G GRTGT +D+ ++R+ + +D+ T++ +R QR ++ +DQ+
Sbjct: 223 -RSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLEHVRDQRPGLVRSKDQF 281
Query: 343 IFCHLALIE 351
F A+ E
Sbjct: 282 EFALTAVAE 290
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICISRL-EDSGTVDVRGTVKRIRSQRAHSIQMRDQYI 490
R PIIVHCS G GRTGT +D+ ++R+ + +D+ T++ +R QR ++ +DQ+
Sbjct: 223 RSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLEHVRDQRPGLVRSKDQFE 282
Query: 491 FCHLALIE 498
F A+ E
Sbjct: 283 FALTAVAE 290
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 39/272 (14%)
Query: 96 SFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSD---YINANFVDGYKQKNAFIS 152
S A +N KNRY D+LA + T L Q D PG+ YIN N +D + F++
Sbjct: 36 SISFATSLKNRHKNRYLDILANEAT--LYPQVTDAPGASTPYYINGNLID-LDLPHKFVA 92
Query: 153 TQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTE 212
Q P+ + DF M++E++ ++IM T++ E G K +YWP G+ G V+
Sbjct: 93 CQAPVVQGIPDFLAMLYEKKISLVIMVTKLEEGGFVKADRYWPEERGS----GSIAVSGN 148
Query: 213 C-VTSSPD-----YVLSSLTLCNTKTLETRM------VAHYQFTAWLDYGVPESALSMLE 260
C +T S D V L + + R Q+T W D+G+P+SA S+
Sbjct: 149 CGLTISEDPGKAYEVEDELKITRRYLILQRADEPPHKFTQVQYTGWPDHGIPQSATSLEA 208
Query: 261 FLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVD 320
L +++ P P++VHCSAGIGRTGTL ++ LE D
Sbjct: 209 LLTNVKNS---------------PTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTD 253
Query: 321 --VRGTVKRIRSQRAHSIQMRDQYIFCHLALI 350
V V +R QR +Q +QY +L L+
Sbjct: 254 TTVYDVVSAMRRQRFGMVQRMEQYFVIYLTLM 285
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 417 ASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVD--VRGTVKR 474
A+ L L P P++VHCSAGIGRTGTL ++ LE D V V
Sbjct: 203 ATSLEALLTNVKNSPTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSA 262
Query: 475 IRSQRAHSIQMRDQYIFCHLALI 497
+R QR +Q +QY +L L+
Sbjct: 263 MRRQRFGMVQRMEQYFVIYLTLM 285
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 117/262 (44%), Gaps = 32/262 (12%)
Query: 104 ENLFKNRYSDVLAYDHTRV--LLSQQDDVPGS-DYINANFVDGYKQKNAFISTQGPMQNT 160
+N KNRY D+LA + T +L PG YIN N +D + F++ Q P+
Sbjct: 44 KNRHKNRYLDILANEETIYPPVLKAVGAQPGRYPYINGNLID-LDLPHTFVACQAPVPQG 102
Query: 161 VEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMT-----HGDFLVTTEC-- 213
V DF + E++ +++M T++ E G K +YWP E ++ H VT +
Sbjct: 103 VPDFLETLSEKKVDLVVMLTKLREGGVLKAERYWPEEEEDSLSFPESGHDAIKVTRDAEA 162
Query: 214 ---VTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQA 270
V + D V L + + V Q+ W D+GVPESA S E L+ ++
Sbjct: 163 SYEVDAELDIVRRPLVI-HVPGKPMHRVLQVQYVGWPDHGVPESAASFDELLSVIKNCVT 221
Query: 271 ALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVD--VRGTVKRI 328
PI+VHCSAGIGRTGTL + +E D V V +
Sbjct: 222 T---------------SPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAM 266
Query: 329 RSQRAHSIQMRDQYIFCHLALI 350
+ +R +Q +QY ++ ++
Sbjct: 267 KQKRFGMVQRLEQYAVIYMTVL 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 435 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVD--VRGTVKRIRSQRAHSIQMRDQYIFC 492
PI+VHCSAGIGRTGTL + +E D V V ++ +R +Q +QY
Sbjct: 224 PILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQKRFGMVQRLEQYAVI 283
Query: 493 HLALI 497
++ ++
Sbjct: 284 YMTVL 288
>pdb|3U96|A Chain A, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
pdb|3U96|B Chain B, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
Length = 306
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 82 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 194 W--PGTEGT-----KMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G+ KMT GD ++ D ++ KT+ +V
Sbjct: 140 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVV---H 188
Query: 243 FTAWLDYGVPESALS--MLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT 300
W D+ S ++ + + + T+ + G + ++HC AG+GRT
Sbjct: 189 VGNWPDFTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRT 248
Query: 301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 249 AQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 297
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 437 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL 496
++HC AG+GRT L +C++ +S + V V ++R QR + +D+ + + L
Sbjct: 238 VIHCRAGVGRTAQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKL 295
Query: 497 IE 498
E
Sbjct: 296 AE 297
>pdb|1XXV|A Chain A, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
pdb|1XXV|B Chain B, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
Length = 306
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 82 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 194 W--PGTEGT-----KMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G+ KMT GD ++ D ++ KT+ +V
Sbjct: 140 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVV---H 188
Query: 243 FTAWLDYGVPESALS--MLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT 300
W D S ++ + + + T+ + G + ++HC AG+GRT
Sbjct: 189 VGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRT 248
Query: 301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 249 AQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 297
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 437 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL 496
++HC AG+GRT L +C++ +S + V V ++R QR + +D+ + + L
Sbjct: 238 VIHCRAGVGRTAQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKL 295
Query: 497 IE 498
E
Sbjct: 296 AE 297
>pdb|1YPT|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|1YPT|B Chain B, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|3BLU|A Chain A, Crystal Structure Yoph Complexed With Inhibitor Pvs
pdb|3BLT|A Chain A, Crystal Structures Of Yoph Complexed With Pvsn And Pvs,
Inhibitors Of Yoph Which Co-Valent Bind To Cys Of Active
Site
Length = 305
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 81 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 138
Query: 194 W--PGTEGT-----KMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G+ KMT GD ++ D ++ KT+ +V
Sbjct: 139 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVV---H 187
Query: 243 FTAWLDYGVPESALS--MLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT 300
W D S ++ + + + T+ + G + ++HC AG+GRT
Sbjct: 188 VGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRT 247
Query: 301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 248 AQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 296
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 437 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL 496
++HC AG+GRT L +C++ +S + V V ++R QR + +D+ + + L
Sbjct: 237 VIHCRAGVGRTAQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKL 294
Query: 497 IE 498
E
Sbjct: 295 AE 296
>pdb|1QZ0|A Chain A, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|1QZ0|B Chain B, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|2I42|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
Complexed With Vanadate, A Transition State Analogue
pdb|1YTN|A Chain A, Hydrolase
pdb|1YTW|A Chain A, Yersinia Ptpase Complexed With Tungstate
pdb|2Y2F|A Chain A, Crystal Structure Of Yersinia Pestis Yoph In Complex With
An Aminooxy-Containing Platform Compound For Inhibitor
Design
pdb|2YDU|A Chain A, Crystal Structure Of Yoph In Complex With
3-(1,1-Dioxido-3-Oxoisothiazolidin-5-Yl)benzaldeyde
Length = 306
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 82 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 194 W--PGTEGT-----KMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G+ KMT GD ++ D ++ KT+ +V
Sbjct: 140 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVV---H 188
Query: 243 FTAWLDYGVPESALS--MLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT 300
W D S ++ + + + T+ + G + ++HC AG+GRT
Sbjct: 189 VGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRT 248
Query: 301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 249 AQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 297
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 437 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL 496
++HC AG+GRT L +C++ +S + V V ++R QR + +D+ + + L
Sbjct: 238 VIHCRAGVGRTAQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKL 295
Query: 497 IE 498
E
Sbjct: 296 AE 297
>pdb|1PA9|A Chain A, Yersinia Protein-Tyrosine Phosphatase Complexed With Pncs
(Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic
Domain, Residues 163-468) Mutant With Cys 235 Replaced
By Arg (C235r)
Length = 284
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 60 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 117
Query: 194 W--PGTEGT-----KMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G+ KMT GD ++ D ++ KT+ +V
Sbjct: 118 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVV---H 166
Query: 243 FTAWLDYGVPESALS--MLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT 300
W D S ++ + + + T+ + G + ++HC AG+GRT
Sbjct: 167 VGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRT 226
Query: 301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 227 AQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 275
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 437 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL 496
++HC AG+GRT L +C++ +S + V V ++R QR + +D+ + + L
Sbjct: 216 VIHCRAGVGRTAQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKL 273
Query: 497 IE 498
E
Sbjct: 274 AE 275
>pdb|3F99|A Chain A, W354f Yersinia Enterocolitica Ptpase Apo Form
pdb|3F9A|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Tungstate
pdb|3F9B|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Divanadate
Length = 306
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 26/229 (11%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 82 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 194 W--PGTEGT-----KMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G+ KMT GD ++ D ++ KT+ +V
Sbjct: 140 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVVHVGN 191
Query: 243 FTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGT 302
F E ++ + + T+ + G + ++HC AG+GRT
Sbjct: 192 FPDQTAVS-SEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQ 250
Query: 303 LCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 251 LIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 297
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 437 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL 496
++HC AG+GRT L +C++ +S + V V ++R QR + +D+ + + L
Sbjct: 238 VIHCRAGVGRTAQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKL 295
Query: 497 IE 498
E
Sbjct: 296 AE 297
>pdb|3BM8|A Chain A, Crystal Structure Of Yoph Mutant D356a Complexed With
Irreversible Inhibitor Pvsn
Length = 305
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 26/229 (11%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 81 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 138
Query: 194 W--PGTEGT-----KMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G+ KMT GD ++ D ++ KT+ +V
Sbjct: 139 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVVHVGN 190
Query: 243 FTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGT 302
+ A E ++ + + T+ + G + ++HC AG+GRT
Sbjct: 191 WPAQTAVS-SEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQ 249
Query: 303 LCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 250 LIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 296
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 437 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL 496
++HC AG+GRT L +C++ +S + V V ++R QR + +D+ + + L
Sbjct: 237 VIHCRAGVGRTAQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKL 294
Query: 497 IE 498
E
Sbjct: 295 AE 296
>pdb|1XXP|A Chain A, Yersinia Yoph (Residues 163-468) C403s Binds
Phosphotyrosyl Peptide At Two Sites
pdb|1XXP|B Chain B, Yersinia Yoph (Residues 163-468) C403s Binds
Phosphotyrosyl Peptide At Two Sites
Length = 306
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 30/231 (12%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 82 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 194 W--PGTEG-----TKMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G +KMT GD ++ D ++ KT+ +V
Sbjct: 140 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVV---H 188
Query: 243 FTAWLDYGVPESALS--MLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT 300
W D S ++ + + + T+ + G + ++H AG+GRT
Sbjct: 189 VGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRT 248
Query: 301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 249 AQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 297
>pdb|1LYV|A Chain A, High-Resolution Structure Of The Catalytically Inactive
Yersinia Tyrosine Phosphatase C403a Mutant In Complex
With Phosphate
Length = 306
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 30/231 (12%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 82 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 194 W--PGTEG-----TKMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G +KMT GD ++ D ++ KT+ +V
Sbjct: 140 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVV---H 188
Query: 243 FTAWLDYGVPESALS--MLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT 300
W D S ++ + + + T+ + G + ++H AG+GRT
Sbjct: 189 VGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRT 248
Query: 301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 249 AQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 297
>pdb|1YTS|A Chain A, A Ligand-Induced Conformational Change In The Yersinia
Protein Tyrosine Phosphatase
Length = 278
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 30/231 (12%)
Query: 136 INANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--LVIIMTTRVIERGRNKCAQY 193
+NAN++ + I+ Q P+Q+ +E +RM+ E +T L ++ ++ I R Y
Sbjct: 54 LNANYIQVGNTRT--IACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 111
Query: 194 W--PGTEG-----TKMTH----GDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQ 242
+ GT G +KMT GD ++ D ++ KT+ +V
Sbjct: 112 FRQSGTYGSITVESKMTQQVGLGDGIMA--------DMYTLTIREAGQKTISVPVV---H 160
Query: 243 FTAWLDYGVPESALS--MLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT 300
W D S ++ + + + T+ + G + ++H AG+GRT
Sbjct: 161 VGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRT 220
Query: 301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
L +C++ +S + V V ++R QR + +D+ + + L E
Sbjct: 221 AQLIGA-MCMNDSRNS-QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAE 269
>pdb|4AHC|A Chain A, Crystal Structure Of An Evolved Replicating Dna Polymerase
pdb|4AHC|B Chain B, Crystal Structure Of An Evolved Replicating Dna Polymerase
pdb|4AIL|C Chain C, Crystal Structure Of An Evolved Replicating Dna Polymerase
Length = 775
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 42 RVRFSDDDSLHAD-PTGTSSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVA 100
+V + D D LHA P G S EFV+ + SK L LEYEGF + F V
Sbjct: 536 KVLYIDTDGLHATIPGGESEEIKKKALEFVKYINSKLPGLLELEYEGFYKR----GFFVT 591
Query: 101 KRR 103
K+R
Sbjct: 592 KKR 594
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 290 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 344
+VHC GIGRTGT I S L + ++V + +R R ++Q +Q +F
Sbjct: 93 LVHCVGGIGRTGT-----ILASYLILTEGLEVESAIDEVRLVRPGAVQTYEQEMF 142
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 437 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
+VHC GIGRTGT I S L + ++V + +R R ++Q +Q +F
Sbjct: 93 LVHCVGGIGRTGT-----ILASYLILTEGLEVESAIDEVRLVRPGAVQTYEQEMF 142
>pdb|2JGU|A Chain A, Crystal Structure Of Dna-directed Dna Polymerase
Length = 775
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 42 RVRFSDDDSLHAD-PTGTSSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVA 100
+V + D D L+A P G S EFV+ + SK L LEYEGF + F V
Sbjct: 536 KVLYIDTDGLYATIPGGESEEIKKKALEFVKYINSKLPGLLELEYEGFYKR----GFFVT 591
Query: 101 KRR 103
K+R
Sbjct: 592 KKR 594
>pdb|3A2F|A Chain A, Crystal Structure Of Pyrococcus Furiosus Dna
PolymerasePCNA Monomer Mutant Complex
Length = 775
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 42 RVRFSDDDSLHAD-PTGTSSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVA 100
+V + D D L+A P G S EFV+ + SK L LEYEGF + F V
Sbjct: 536 KVLYIDTDGLYATIPGGESEEIKKKALEFVKYINSKLPGLLELEYEGFYKR----GFFVT 591
Query: 101 KRR 103
K+R
Sbjct: 592 KKR 594
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Query: 215 TSSPDYVLSSLTLCNTKTL-ETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALL 273
T PD LC+ + ET+ H D+ VP + + +L+F+ A+
Sbjct: 56 TKHPD-KFRIYNLCSERGYDETKFDNHVYRVMIDDHNVP-TLVDLLKFIDDAK------- 106
Query: 274 ADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCT 305
W I +HC AG GRTGTL +
Sbjct: 107 -----VWMTSDPDHVIAIHCKAGKGRTGTLVS 133
>pdb|1QHT|A Chain A, Dna Polymerase From Thermococcus Sp. 9on-7 Archaeon
Length = 775
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 42 RVRFSDDDSLHAD-PTGTSSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVA 100
+V ++D D LHA P + + EF++ + K L LEYEGF ++ F V
Sbjct: 535 KVLYADTDGLHATIPGADAETVKKKAKEFLKYINPKLPGLLELEYEGFYVR----GFFVT 590
Query: 101 KRR 103
K++
Sbjct: 591 KKK 593
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 278 DTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI------SRLEDSGTVDVRGTVKRIRSQ 331
D W +HC AG GRTG + IC L+ +D G V R R +
Sbjct: 103 DQWLSEDDNHVAAIHCKAGKGRTGVM----ICAYLLHRGKFLKAQEALDFYGEV-RTRDK 157
Query: 332 RAHSIQMRDQYIFCHLALIEYAL 354
+ +I + +Y++ + L++ L
Sbjct: 158 KGVTIPSQRRYVYYYSYLLKNHL 180
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 425 DTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI------SRLEDSGTVDVRGTVKRIRSQ 478
D W +HC AG GRTG + IC L+ +D G V R R +
Sbjct: 103 DQWLSEDDNHVAAIHCKAGKGRTGVM----ICAYLLHRGKFLKAQEALDFYGEV-RTRDK 157
Query: 479 RAHSIQMRDQYIFCHLALIEYAL 501
+ +I + +Y++ + L++ L
Sbjct: 158 KGVTIPSQRRYVYYYSYLLKNHL 180
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 285 RGPPIIVHCSAGIGRTG 301
R P++VHC+AG+ R+G
Sbjct: 124 RNEPVLVHCAAGVNRSG 140
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 432 RGPPIIVHCSAGIGRTG 448
R P++VHC+AG+ R+G
Sbjct: 124 RNEPVLVHCAAGVNRSG 140
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 341
RG + VHC+ G GRTGT+ + R +G + IR R SI+ +Q
Sbjct: 87 RGEAVGVHCALGFGRTGTMLACYLVKERGLAAGD-----AIAEIRRLRPGSIETYEQ 138
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 488
RG + VHC+ G GRTGT+ + R +G + IR R SI+ +Q
Sbjct: 87 RGEAVGVHCALGFGRTGTMLACYLVKERGLAAGD-----AIAEIRRLRPGSIETYEQ 138
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 289 IIVHCSAGIGRTGTL 303
I VHC AG+GRTGTL
Sbjct: 272 IAVHCKAGLGRTGTL 286
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 436 IIVHCSAGIGRTGTL 450
I VHC AG+GRTGTL
Sbjct: 272 IAVHCKAGLGRTGTL 286
>pdb|2D4V|A Chain A, Crystal Structure Of Nad Dependent Isocitrate
Dehydrogenase From Acidithiobacillus Thiooxidans
pdb|2D4V|B Chain B, Crystal Structure Of Nad Dependent Isocitrate
Dehydrogenase From Acidithiobacillus Thiooxidans
pdb|2D4V|C Chain C, Crystal Structure Of Nad Dependent Isocitrate
Dehydrogenase From Acidithiobacillus Thiooxidans
pdb|2D4V|D Chain D, Crystal Structure Of Nad Dependent Isocitrate
Dehydrogenase From Acidithiobacillus Thiooxidans
Length = 429
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 25 PSAWPEAMKV----EIEDAVKRVRFSDDDSLHADPTGTSSSQGLSIAEFVEAVRSKGRSG 80
P+ PEA K+ E V ++RF D ++ P T S+ L I ++ G+
Sbjct: 166 PAGSPEAEKIIRFLREEMGVTKIRFPDSSAIGIKPVSTEGSERL-IRRTIQYALEHGKPS 224
Query: 81 LCLEYEGFKIKPPDGSF 97
+ L ++G +K +G F
Sbjct: 225 VSLVHKGNIMKFTEGGF 241
>pdb|4FM2|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase (Triple Mutant)
Bound To A Dsdna, In Edition Mode
Length = 793
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 35 EIEDAVKRVRFSDDDSLHADPTGTSSSQGLSIA-EFVEAVRSKGRSGLCLEYEGF 88
E+E +V + D D L+A G + A +FVE + SK L LEYEGF
Sbjct: 550 ELESRGFKVLYIDTDGLYATIPGAKHEEIKEKALKFVEYINSKLPGLLELEYEGF 604
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 290 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 344
+VH GIGRTGT I S L + ++V + +R R ++Q +Q +F
Sbjct: 93 LVHSVGGIGRTGT-----ILASYLILTEGLEVESAIDEVRLVRPGAVQTYEQEMF 142
Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 437 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
+VH GIGRTGT I S L + ++V + +R R ++Q +Q +F
Sbjct: 93 LVHSVGGIGRTGT-----ILASYLILTEGLEVESAIDEVRLVRPGAVQTYEQEMF 142
>pdb|4FLT|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
Dsdna, In Edition Mode
pdb|4FLU|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
Dsdna, In Edition Mode
pdb|4FLV|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
Dsdna, In Edition Mode
pdb|4FLW|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
Dsdna, In Edition Mode
pdb|4FLX|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
Dsdna, In Edition Mode
pdb|4FLY|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
Dsdna, In Edition Mode
pdb|4FLZ|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
Dsdna, In Edition Mode
pdb|4FM0|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
Dsdna, In Edition Mode
pdb|4FM1|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A
Dsdna, In Edition Mode
Length = 793
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 35 EIEDAVKRVRFSDDDSLHADPTGTSSSQGLSIA-EFVEAVRSKGRSGLCLEYEGF 88
E+E +V + D D L+A G + A +FVE + SK L LEYEGF
Sbjct: 550 ELESRGFKVLYIDTDGLYATIPGAKHEEIKEKALKFVEYINSKLPGLLELEYEGF 604
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 341
RG + VHC+ G GRTGT + R +G + IR R SI+ +Q
Sbjct: 88 RGEAVGVHCALGFGRTGTXLACYLVKERGLAAGD-----AIAEIRRLRPGSIETYEQ 139
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 488
RG + VHC+ G GRTGT + R +G + IR R SI+ +Q
Sbjct: 88 RGEAVGVHCALGFGRTGTXLACYLVKERGLAAGD-----AIAEIRRLRPGSIETYEQ 139
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,508,257
Number of Sequences: 62578
Number of extensions: 619726
Number of successful extensions: 2021
Number of sequences better than 100.0: 127
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1423
Number of HSP's gapped (non-prelim): 259
length of query: 523
length of database: 14,973,337
effective HSP length: 103
effective length of query: 420
effective length of database: 8,527,803
effective search space: 3581677260
effective search space used: 3581677260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)