Query         psy15394
Match_columns 523
No_of_seqs    456 out of 2895
Neff          7.7 
Searched_HMMs 46136
Date          Fri Aug 16 19:51:12 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy15394.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15394hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG4228|consensus              100.0 2.4E-93 5.2E-98  781.8  24.2  422   62-501   521-1086(1087)
  2 PHA02742 protein tyrosine phos 100.0 3.6E-76 7.8E-81  597.4  32.0  291   61-355     6-298 (303)
  3 PHA02740 protein tyrosine phos 100.0 3.4E-76 7.3E-81  593.9  31.0  280   62-355     7-290 (298)
  4 PHA02747 protein tyrosine phos 100.0 1.2E-74 2.6E-79  588.1  32.6  291   61-355     6-301 (312)
  5 PHA02746 protein tyrosine phos 100.0 2.6E-74 5.7E-79  587.9  32.6  290   62-355     7-316 (323)
  6 PHA02738 hypothetical protein; 100.0 8.9E-74 1.9E-78  583.3  30.9  289   62-355     7-296 (320)
  7 KOG0790|consensus              100.0 1.8E-71   4E-76  553.4  13.7  281   63-355   219-523 (600)
  8 KOG0792|consensus              100.0 9.6E-69 2.1E-73  581.0  26.3  284   63-360   851-1137(1144)
  9 smart00194 PTPc Protein tyrosi 100.0 2.6E-66 5.7E-71  516.0  26.1  256   81-351     2-258 (258)
 10 KOG0791|consensus              100.0 4.9E-66 1.1E-70  509.9  20.3  280   60-355    74-356 (374)
 11 KOG0793|consensus              100.0 2.5E-64 5.5E-69  523.1  17.4  322   15-353   658-995 (1004)
 12 cd00047 PTPc Protein tyrosine  100.0 2.8E-60   6E-65  465.0  25.9  231  107-351     1-231 (231)
 13 COG5599 PTP2 Protein tyrosine  100.0   8E-60 1.7E-64  445.5  17.3  238   96-353    44-294 (302)
 14 PF00102 Y_phosphatase:  Protei 100.0 5.6E-58 1.2E-62  448.0  22.8  232  105-351     1-235 (235)
 15 KOG4228|consensus              100.0 5.8E-56 1.3E-60  487.4  20.0  279   60-354   800-1086(1087)
 16 PRK15375 pathogenicity island  100.0 1.7E-52 3.7E-57  432.0  24.2  223  112-354   305-531 (535)
 17 KOG0789|consensus              100.0 1.3E-50 2.8E-55  429.7  26.5  276   67-359    90-373 (415)
 18 smart00012 PTPc_DSPc Protein t  99.9 2.5E-23 5.5E-28  177.1  11.7  104  237-351     1-105 (105)
 19 smart00404 PTPc_motif Protein   99.9 2.5E-23 5.5E-28  177.1  11.7  104  237-351     1-105 (105)
 20 PHA02740 protein tyrosine phos  99.9 2.2E-22 4.7E-27  203.2  11.3   98  401-503   194-291 (298)
 21 PHA02742 protein tyrosine phos  99.8 4.4E-21 9.5E-26  194.8  11.2  101  401-503   199-299 (303)
 22 PHA02738 hypothetical protein;  99.8 6.7E-21 1.4E-25  194.7  11.4  101  401-502   195-296 (320)
 23 PHA02746 protein tyrosine phos  99.8 1.3E-20 2.8E-25  192.9  11.8  100  401-503   218-317 (323)
 24 PHA02747 protein tyrosine phos  99.8 6.5E-20 1.4E-24  186.9  11.5   98  402-502   201-301 (312)
 25 KOG0790|consensus               99.8 8.5E-20 1.8E-24  183.8   7.9   91  401-502   430-523 (600)
 26 KOG0792|consensus               99.7 4.2E-18   9E-23  187.3   9.9   94  403-509  1046-1139(1144)
 27 COG5599 PTP2 Protein tyrosine   99.7   1E-17 2.2E-22  159.8   4.7   71  432-502   217-296 (302)
 28 KOG0791|consensus               99.7 1.3E-16 2.8E-21  159.2   9.1   92  400-504   267-358 (374)
 29 smart00194 PTPc Protein tyrosi  99.7 1.7E-16 3.7E-21  158.0   9.3   83  402-497   175-257 (258)
 30 cd00047 PTPc Protein tyrosine   99.6 7.2E-16 1.6E-20  150.9   9.4   84  403-498   148-231 (231)
 31 smart00404 PTPc_motif Protein   99.6   1E-15 2.3E-20  129.9   9.2   84  403-497    20-104 (105)
 32 smart00012 PTPc_DSPc Protein t  99.6   1E-15 2.3E-20  129.9   9.2   84  403-497    20-104 (105)
 33 PF00102 Y_phosphatase:  Protei  99.6   1E-15 2.2E-20  149.3   8.2   84  402-498   152-235 (235)
 34 PTZ00242 protein tyrosine phos  99.6 5.2E-15 1.1E-19  137.2  12.1  138  148-349    16-155 (166)
 35 KOG0793|consensus               99.6 3.1E-15 6.6E-20  157.8   7.3   87  401-500   908-995 (1004)
 36 KOG0789|consensus               99.4 2.2E-13 4.7E-18  144.8   8.9   75  432-506   298-373 (415)
 37 PRK15375 pathogenicity island   99.4 1.7E-13 3.6E-18  143.2   7.5   92  402-502   440-532 (535)
 38 PTZ00393 protein tyrosine phos  99.4 1.7E-12 3.8E-17  124.7  13.0  134  148-348    92-225 (241)
 39 KOG1720|consensus               99.2 8.9E-11 1.9E-15  109.3  10.8   94  238-353   116-209 (225)
 40 cd00127 DSPc Dual specificity   99.1 1.2E-09 2.6E-14   97.9  13.2   88  237-346    49-136 (139)
 41 PTZ00242 protein tyrosine phos  99.0 7.5E-10 1.6E-14  102.8   6.1   59  432-496    97-155 (166)
 42 KOG2836|consensus               98.9 4.3E-08 9.4E-13   84.8  13.0  131  148-344    17-148 (173)
 43 COG2453 CDC14 Predicted protei  98.8 2.4E-08 5.2E-13   94.0  11.4   90  245-353    79-168 (180)
 44 KOG1720|consensus               98.7 5.4E-08 1.2E-12   90.9   8.1   64  433-501   147-210 (225)
 45 smart00195 DSPc Dual specifici  98.6 3.1E-07 6.7E-12   82.4  11.3   56  285-345    77-132 (138)
 46 PTZ00393 protein tyrosine phos  98.6 9.6E-08 2.1E-12   92.2   6.4   56  433-495   170-225 (241)
 47 PF00782 DSPc:  Dual specificit  98.5 8.2E-07 1.8E-11   79.0   9.5   57  286-347    73-129 (133)
 48 cd00127 DSPc Dual specificity   98.4 6.9E-07 1.5E-11   79.9   6.8   55  433-492    81-135 (139)
 49 smart00195 DSPc Dual specifici  98.2 2.8E-06 6.1E-11   76.1   6.3   55  433-492    78-132 (138)
 50 COG2453 CDC14 Predicted protei  98.1 7.8E-06 1.7E-10   77.0   6.9   63  434-500   106-168 (180)
 51 PF00782 DSPc:  Dual specificit  98.0   5E-06 1.1E-10   73.9   4.0   57  433-494    73-129 (133)
 52 PRK12361 hypothetical protein;  97.9 4.9E-05 1.1E-09   83.9  11.4   81  246-345   150-230 (547)
 53 PF05706 CDKN3:  Cyclin-depende  97.7 9.7E-05 2.1E-09   67.6   7.2   92  165-308    64-155 (168)
 54 PF03162 Y_phosphatase2:  Tyros  97.4 0.00039 8.4E-09   64.4   7.0   71  238-330    59-129 (164)
 55 KOG2836|consensus               97.2 0.00047   1E-08   60.2   5.1   54  433-493    97-150 (173)
 56 PF14566 PTPlike_phytase:  Inos  97.1 0.00098 2.1E-08   60.8   6.4   50  245-310    99-148 (149)
 57 PRK12361 hypothetical protein;  97.1 0.00098 2.1E-08   73.7   6.9   57  433-493   175-231 (547)
 58 COG5350 Predicted protein tyro  96.3   0.021 4.6E-07   51.3   8.3   52  284-339    91-142 (172)
 59 KOG2283|consensus               96.1  0.0096 2.1E-07   63.3   6.2   90  244-350    78-172 (434)
 60 KOG1718|consensus               95.9    0.03 6.5E-07   51.2   7.5   46  285-335    93-138 (198)
 61 KOG1719|consensus               95.8   0.044 9.6E-07   49.4   8.0   61  285-354   108-168 (183)
 62 TIGR01244 conserved hypothetic  95.8   0.061 1.3E-06   48.1   9.1   42  286-334    86-127 (135)
 63 KOG1719|consensus               95.8   0.022 4.7E-07   51.3   5.9   61  434-503   110-170 (183)
 64 PF13350 Y_phosphatase3:  Tyros  95.6   0.018 3.9E-07   53.2   5.0   37  150-187    21-57  (164)
 65 KOG1716|consensus               95.5   0.041 8.9E-07   55.7   7.7   49  286-339   155-203 (285)
 66 PF03162 Y_phosphatase2:  Tyros  95.0   0.024 5.2E-07   52.5   3.6   39  433-477    91-129 (164)
 67 PF05706 CDKN3:  Cyclin-depende  94.9   0.016 3.5E-07   53.2   2.3   22  434-455   134-155 (168)
 68 KOG1718|consensus               94.8   0.033 7.1E-07   50.9   3.9   49  432-485    93-141 (198)
 69 COG5350 Predicted protein tyro  94.8   0.052 1.1E-06   48.8   5.0   57  424-487    87-143 (172)
 70 KOG1717|consensus               94.5    0.11 2.4E-06   50.9   7.0   66  287-361   252-317 (343)
 71 PF13350 Y_phosphatase3:  Tyros  94.1    0.03 6.4E-07   51.7   2.2   23  434-456   125-147 (164)
 72 TIGR01244 conserved hypothetic  93.7   0.086 1.9E-06   47.1   4.3   41  433-480    86-126 (135)
 73 PF14566 PTPlike_phytase:  Inos  93.2   0.044 9.5E-07   49.9   1.6   26  432-457   123-148 (149)
 74 PF04273 DUF442:  Putative phos  93.1    0.22 4.7E-06   42.9   5.7   38  254-309    71-108 (110)
 75 PLN02727 NAD kinase             93.0    0.24 5.2E-06   56.8   7.2   41  253-309   324-364 (986)
 76 KOG1716|consensus               92.4    0.17 3.7E-06   51.2   4.9   48  433-485   155-202 (285)
 77 COG2365 Protein tyrosine/serin  91.8    0.14   3E-06   50.8   3.3   28  286-313   136-163 (249)
 78 KOG1717|consensus               90.9    0.41   9E-06   47.0   5.3   68  433-509   251-318 (343)
 79 COG2365 Protein tyrosine/serin  89.9    0.23 5.1E-06   49.2   2.8   25  433-457   136-160 (249)
 80 KOG4471|consensus               89.7    0.46 9.9E-06   51.5   4.9   26  285-310   373-398 (717)
 81 PLN02727 NAD kinase             84.1    0.71 1.5E-05   53.1   2.7   24  433-456   341-364 (986)
 82 PF04273 DUF442:  Putative phos  83.4    0.67 1.4E-05   39.9   1.7   23  433-456    86-108 (110)
 83 KOG1572|consensus               82.2     3.1 6.8E-05   40.4   5.9   22  285-306   147-168 (249)
 84 KOG2283|consensus               81.4     1.5 3.3E-05   46.9   3.8   61  432-495   106-170 (434)
 85 KOG2386|consensus               79.5     3.3 7.1E-05   43.5   5.4   83  245-342    93-175 (393)
 86 PF06602 Myotub-related:  Myotu  76.9     4.2 9.2E-05   42.4   5.4   26  285-310   230-255 (353)
 87 KOG4471|consensus               76.7     1.9 4.1E-05   46.9   2.8   59  432-490   373-469 (717)
 88 KOG1089|consensus               71.1     7.4 0.00016   42.7   5.6   25  286-310   344-368 (573)
 89 KOG1572|consensus               65.6       5 0.00011   39.1   2.6   23  433-455   148-170 (249)
 90 PF06602 Myotub-related:  Myotu  55.2     7.8 0.00017   40.5   2.2   24  433-456   231-254 (353)
 91 KOG2386|consensus               50.4      14  0.0003   38.9   3.1   49  434-487   125-173 (393)
 92 KOG1089|consensus               43.7      17 0.00038   39.9   2.7   22  434-455   345-366 (573)
 93 PF02061 Lambda_CIII:  Lambda P  40.0      34 0.00074   23.8   2.6   24  240-263     2-25  (45)
 94 cd01518 RHOD_YceA Member of th  38.5      28  0.0006   28.7   2.6   19  285-304    60-78  (101)
 95 COG3453 Uncharacterized protei  38.2 1.1E+02  0.0025   26.8   6.2   12  286-297    87-98  (130)
 96 cd01523 RHOD_Lact_B Member of   37.7      32 0.00069   28.2   2.9   17  285-302    60-76  (100)
 97 PRK11493 sseA 3-mercaptopyruva  28.7      55  0.0012   32.8   3.4   23  285-307   230-252 (281)
 98 PLN02160 thiosulfate sulfurtra  27.9      55  0.0012   29.0   2.9   18  285-303    80-97  (136)
 99 cd01533 4RHOD_Repeat_2 Member   25.5      69  0.0015   26.7   3.0   14  286-300    66-79  (109)
100 COG0607 PspE Rhodanese-related  23.7      60  0.0013   26.7   2.2   16  432-448    60-75  (110)
101 KOG1147|consensus               21.2      22 0.00049   38.7  -1.1   28  149-176   476-503 (712)

No 1  
>KOG4228|consensus
Probab=100.00  E-value=2.4e-93  Score=781.75  Aligned_cols=422  Identities=39%  Similarity=0.658  Sum_probs=358.0

Q ss_pred             cccCHHHHHHHHHhcCh---hhHHHHHhhcccCCCCcchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCceee
Q psy15394         62 QGLSIAEFVEAVRSKGR---SGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINA  138 (523)
Q Consensus        62 ~~~~~~~~~~~~~~~~~---~~~~~Ef~~l~~~~~~~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINA  138 (523)
                      .+|++++|++++..+..   -+|.+||+.|...  ..++.++.+.+|+.||||.||++|||+||+|...+|++++|||||
T Consensus       521 ~pI~v~dl~~~i~~~~~~~~~~F~~Eyesl~~~--~~~~~~s~~~en~~KNRY~nilayD~sRV~L~~i~Gd~~sDYINA  598 (1087)
T KOG4228|consen  521 GPIPVADLLEHIERRKADDGYGFKQEYESLPEG--QFTWEHSNKKENKQKNRYENILAYDHSRVILPPIEGDPNSDYINA  598 (1087)
T ss_pred             CCccHHHHHHHHHHhhcccccchHHHHhhcccc--CCccccCccccccccccCCcchhhhcceeeecccCCCccccceee
Confidence            38999999999987643   4699999999766  667889999999999999999999999999999999999999999


Q ss_pred             eccCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEeCC
Q psy15394        139 NFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP  218 (523)
Q Consensus       139 s~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~  218 (523)
                      |||+||+.+++|||||||+++|+.||||||||+++.+|||+|++.|.++.||.+|||   .++.+||++.|++.+.....
T Consensus       599 nyIdGy~e~n~yIaaQgP~~eTv~DFWRMVWEq~S~~IVMvTnl~E~~r~kC~qYWP---~~t~~yGdi~V~~~~~~~~a  675 (1087)
T KOG4228|consen  599 NYIDGYKEPNAYIAAQGPRPETVGDFWRMVWEQKSAGIVMVTNLEEFSRVKCAQYWP---EGTETYGDIKVTLVQTKPLA  675 (1087)
T ss_pred             eeeecccccccceeccCCcccchHHHHHHheeccCCcEEEEecccccccccccccCC---CCccccccccccceeeeeec
Confidence            999999999999999999999999999999999999999999999999999999999   35789999999999999999


Q ss_pred             CceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCc
Q psy15394        219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIG  298 (523)
Q Consensus       219 ~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvG  298 (523)
                      +|.+|+|.|...+....|.|+||||++|||||+|..+..+|.|++.|+..+             .+..||||||||||+|
T Consensus       676 ~y~iRtf~l~~~g~~~~R~v~qfhFt~Wpd~gvPe~~t~lL~f~rrvk~~~-------------p~~aGPiVVHCSAGvG  742 (1087)
T KOG4228|consen  676 EYGIRTFALKKQGENPKREVRQFHFTAWPDHGVPETPTGLLKFRRRVKTFN-------------PPDAGPIVVHCSAGVG  742 (1087)
T ss_pred             cceEEeeeccccCCCCCceeeeeeeccCCCCCCcccchHHHHHHHHhccCC-------------CcCCCCEEEECCCCCC
Confidence            999999999988888899999999999999999999999999999998753             3456899999999999


Q ss_pred             hhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHHc----------------CCCCCC
Q psy15394        299 RTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR----------------GLISAK  362 (523)
Q Consensus       299 RTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~~----------------~~~~~~  362 (523)
                      |||+|++||.++++++.++.+||++.|+.||.||.+||||.+||.|||+||+|+..+-                .-+++.
T Consensus       743 RTG~fi~iDaml~~~~~e~~vdiy~~v~~lR~QR~~mVQt~eQYiFi~~AllE~~~~G~T~i~~~~~~~~~~~l~~~~p~  822 (1087)
T KOG4228|consen  743 RTGCFIVIDAMLDRLECEGKVDIYGHVKTLRRQRNNMVQTEEQYIFIHEALLEACLCGDTEVPASTLAPYSQKLKRIDPP  822 (1087)
T ss_pred             CcceEEEeHHHHHHHHhhCccceechhHHHHhccccccccHHHHHHHHHHHHHHHhcCCccccHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999999999999999999999999999999999998741                112333


Q ss_pred             CCcchhhhhhccCC---CC---CCCCCCCCCCCCCC-----------ccccc----------------------------
Q psy15394        363 PDLSGFQTSCATSR---PG---GHLGRAPAGAPNHR-----------PLLGR----------------------------  397 (523)
Q Consensus       363 ~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~-----------~~~~~----------------------------  397 (523)
                      ...++++++|+...   +.   ...+..|.|..|||           |++..                            
T Consensus       823 ~~~t~le~EF~~L~~~~~~~~~~~~~~l~~N~~KNR~~~i~P~d~~rv~L~~~~G~~sdYINAs~idgy~~~~~fivtq~  902 (1087)
T KOG4228|consen  823 ENKTGLEEEFKTLNSCKPRTRMMICGNLPENKSKNRQVNILPYDRNRVILIPTHGESSDYINASFIDGYRQPKAFIVTQG  902 (1087)
T ss_pred             CCCcchHHHHHHHhhccccchhhhccccchhcccccccccCCchhcccceeccCCCcccccchhhhcccCCcceEEEecC
Confidence            45566777765321   11   11133344433332           22210                            


Q ss_pred             ---------------CCcCchhhhhhHHHHH----Hhh-------------------------hhhhhh-----------
Q psy15394        398 ---------------DRAAALSMLEFLAKAR----YTQ-------------------------ASLLAD-----------  422 (523)
Q Consensus       398 ---------------~~~~~i~~l~~~~~~~----~~~-------------------------~~~~~~-----------  422 (523)
                                     ..+.+|+||+.+...+    |+.                         +.|...           
T Consensus       903 PL~~T~~DFWrmi~d~~~tsiVmL~~l~~~~~C~qyw~~~g~~~yg~i~Ve~~~~~~~~~~t~r~f~i~n~~~~~~r~v~  982 (1087)
T KOG4228|consen  903 PLAETVEDFWRMIWDQNVTSIVMLTELKHPEKCPQYWPPEGSQRYGPIEVEDMNEHINPQYTAREFGVTNEREKQSRTVR  982 (1087)
T ss_pred             CcccchHHHHHHhhccceeEEEEecccCcccccccccCCcCceecCcEEEEecccccchhhhhhhheeeeccccCceEEE
Confidence                           1356789998775431    111                         111100           


Q ss_pred             --ccccCCCC-----------------------CCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHh
Q psy15394        423 --LGDTWAGH-----------------------PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRS  477 (523)
Q Consensus       423 --~~~~~~~~-----------------------~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~  477 (523)
                        ...+|+..                       ...+|++|||++|+||+|+||++.+++++++.++.||||++||.||.
T Consensus       983 qfq~~~WP~~~~~p~~~~~~~~i~~~~~~~q~~~~~~P~~Vhc~nG~~rsg~f~ai~~l~e~~~~e~~vDVfq~vk~Lr~ 1062 (1087)
T KOG4228|consen  983 QFQFTGWPEYGKPPQSKGPISKIPSVASKWQQLGADGPIIVHCLNGVGRTGTFCAISILLERMRKEGVVDVFQTVKTLRF 1062 (1087)
T ss_pred             EEEecCCcccCcCCCCcchhhhHHHHHHHHHhhcCCCCEEEEEcCCCcceeehHHHHHHHHHHhhcCceeeehhhhhhhh
Confidence              01245531                       23689999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCHHHHHHHHHHHHHHHH
Q psy15394        478 QRAHSIQMRDQYIFCHLALIEYAL  501 (523)
Q Consensus       478 qR~~~v~t~~Qy~f~~~~i~~~~~  501 (523)
                      +|++||++.+||.|||+++++|+.
T Consensus      1063 ~rp~mv~t~~QY~fcYdv~~~y~~ 1086 (1087)
T KOG4228|consen 1063 QRPGMVDTSDQYQFCYDVALEYLG 1086 (1087)
T ss_pred             cCccccCcHHHHHHHHHHHHHhhc
Confidence            999999999999999999999973


No 2  
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=100.00  E-value=3.6e-76  Score=597.35  Aligned_cols=291  Identities=31%  Similarity=0.579  Sum_probs=261.3

Q ss_pred             CcccC-HHHHHHHHHhcChh-hHHHHHhhcccCCCCcchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCceee
Q psy15394         61 SQGLS-IAEFVEAVRSKGRS-GLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINA  138 (523)
Q Consensus        61 ~~~~~-~~~~~~~~~~~~~~-~~~~Ef~~l~~~~~~~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINA  138 (523)
                      ...++ ..+|++.+++.... -+.+||+.|......+++..+..++|..||||.||+|||+|||+|+..++  ++|||||
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~i~~E~~~i~~~~~~~~~~~~~~~~N~~KNRy~~i~~~D~tRV~L~~~~~--~~dYINA   83 (303)
T PHA02742          6 SKKNSFAKNCEQLIEESNLAEILKEEHEHIMQEIVAFSCNESLELKNMKKCRYPDAPCFDRNRVILKIEDG--GDDFINA   83 (303)
T ss_pred             ccccCcHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCCchhhccChhhhhcCCCCCCCCCCCCEEEeCCCCC--CCCcEEE
Confidence            35688 89999999876544 47889999987777788999999999999999999999999999987553  6899999


Q ss_pred             eccCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEeCC
Q psy15394        139 NFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP  218 (523)
Q Consensus       139 s~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~  218 (523)
                      |||+|+..+++|||||||+++|+.|||+||||++|.+|||||.+.|.|+.||.+|||.+.++...||+|+|++.++....
T Consensus        84 syI~g~~~~~~fIatQ~Pl~~T~~dFW~MVw~~~~~vIVmLt~~~E~g~~kc~~YWp~~~~~~~~~g~~~V~~~~~~~~~  163 (303)
T PHA02742         84 SYVDGHNAKGRFICTQAPLEETALDFWQAIFQDQVRVIVMITKIMEDGKEACYPYWMPHERGKATHGEFKIKTKKIKSFR  163 (303)
T ss_pred             eeecCCCCCCeEEEECCCCcccHHHHHHHHhhcCCCeEEEcchhhhCCeeeccccCCCCCCCceEEEEEEEEEEEEEEcC
Confidence            99999998899999999999999999999999999999999999999999999999988778899999999999999889


Q ss_pred             CceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCc
Q psy15394        219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIG  298 (523)
Q Consensus       219 ~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvG  298 (523)
                      +|++++|.|.+.+.+++|.|+||||++|||+|+|.++..|++|+..|+..+.....  ..........+|||||||||+|
T Consensus       164 ~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~--~~~~~~~~~~~PIvVHCsaGvG  241 (303)
T PHA02742        164 NYAVTNLCLTDTNTGASLDIKHFAYEDWPHGGLPRDPNKFLDFVLAVREADLKADV--DIKGENIVKEPPILVHCSAGLD  241 (303)
T ss_pred             CEEEEEEEEEECCCCceEEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHhhhccc--cccccccCCCCCeEEECCCCCc
Confidence            99999999998777889999999999999999999999999999999885432100  0000111235799999999999


Q ss_pred             hhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHH
Q psy15394        299 RTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS  355 (523)
Q Consensus       299 RTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~  355 (523)
                      |||||||+|++++++..++.+||+++|+.||+||++||||.+||.|||++|++|+..
T Consensus       242 RTGtF~aid~~i~~~~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~y~~~  298 (303)
T PHA02742        242 RAGAFCAIDICISKYNERAIIPLLSIVRDLRKQRHNCLSLPQQYIFCYFIVLIFAKL  298 (303)
T ss_pred             hhHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999874


No 3  
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=100.00  E-value=3.4e-76  Score=593.94  Aligned_cols=280  Identities=23%  Similarity=0.469  Sum_probs=253.9

Q ss_pred             cccCHHHHHHHHHhcCh-hhHHHHHhhcccCCCCcchhhhccccccCCCC--CCCCCCCCCCeeeecCCCCCCCCCceee
Q psy15394         62 QGLSIAEFVEAVRSKGR-SGLCLEYEGFKIKPPDGSFEVAKRRENLFKNR--YSDVLAYDHTRVLLSQQDDVPGSDYINA  138 (523)
Q Consensus        62 ~~~~~~~~~~~~~~~~~-~~~~~Ef~~l~~~~~~~~~~~a~~~~N~~KNR--y~~i~p~D~sRV~L~~~~~~~~sdYINA  138 (523)
                      .++++++|++++.+.+. .++.+||+.|......+++..+..++|..|||  |.||+|||||||+|+.     ++|||||
T Consensus         7 ~~~~~~~f~~~~~~~~~~~~i~~E~~~i~~~~~~~~~~~~~~~~n~~knr~r~~~i~~~D~sRV~L~~-----~~~YINA   81 (298)
T PHA02740          7 VDINGMDFINFINKPDLLSCIIKEYRAIVPEHEDEANKACAQAENKAKDENLALHITRLLHRRIKLFN-----DEKVLDA   81 (298)
T ss_pred             cccCHHHHHHHHhCCCHHHHHHHHHHHHhccCccchhhhhhchhhhcccccccCCcCCccCceEEecC-----CCCcEEE
Confidence            45899999999988764 67999999998777788999999999999996  5899999999999964     3589999


Q ss_pred             eccCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccc-cccCCCCCCeeEecceeEEEeEEEeC
Q psy15394        139 NFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCA-QYWPGTEGTKMTHGDFLVTTECVTSS  217 (523)
Q Consensus       139 s~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~-~YwP~~~~~~~~~g~~~V~~~~~~~~  217 (523)
                      |||+||..+++|||||||+++|++|||+||||++|.+|||||++.|   .||. +|||.+.+....+|+|+|++.++...
T Consensus        82 nyVdG~~~~~~fIaTQ~Pl~~T~~dFW~MVwe~~~~iIVMLt~~~e---~kc~~~YWP~~~~~~~~~g~f~V~~~~~~~~  158 (298)
T PHA02740         82 RFVDGYDFEQKFICIINLCEDACDKFLQALSDNKVQIIVLISRHAD---KKCFNQFWSLKEGCVITSDKFQIETLEIIIK  158 (298)
T ss_pred             EEecCCCCCCcEEEecCCchhhHHHHHHHHHhcCCCEEEEcccccc---ccccccCCCCCCCCeEEECCEEEEEEEEEec
Confidence            9999999999999999999999999999999999999999999887   4799 99999878888999999999999989


Q ss_pred             CCceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCC
Q psy15394        218 PDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGI  297 (523)
Q Consensus       218 ~~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGv  297 (523)
                      .+|+.+.|.|++ .++++|.|+||||++|||+|+|.++..||+|+..|+...........     ....+|||||||||+
T Consensus       159 ~~~~~~~l~l~~-~~~~~r~V~Hfqyt~WPd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~-----~~~~~PIVVHCSaGv  232 (298)
T PHA02740        159 PHFNLTLLSLTD-KFGQAQKISHFQYTAWPADGFSHDPDAFIDFFCNIDDLCADLEKHKA-----DGKIAPIIIDCIDGI  232 (298)
T ss_pred             CCEEEEEEEEEc-CCCCcEEEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHhhc-----cCCCCCEEEECCCCC
Confidence            999999999987 45789999999999999999999999999999999987643322111     123579999999999


Q ss_pred             chhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHH
Q psy15394        298 GRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS  355 (523)
Q Consensus       298 GRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~  355 (523)
                      ||||||||+|++++++..++.+||+++|++||+||++||||.+||.|||++|++|+..
T Consensus       233 GRTGtFcaiDi~l~~~~~~~~vdi~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~yl~~  290 (298)
T PHA02740        233 SSSAVFCVFDICATEFDKTGMLSIANALKKVRQKKYGCMNCLDDYVFCYHLIAAYLKE  290 (298)
T ss_pred             chhHHHHHHHHHHHHHHhcCcccHHHHHHHHHhhCccccCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999875


No 4  
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=100.00  E-value=1.2e-74  Score=588.09  Aligned_cols=291  Identities=29%  Similarity=0.540  Sum_probs=261.9

Q ss_pred             CcccCHHHHHHHHHhcChhh-HHHHHhhcccCCCCcchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCceeee
Q psy15394         61 SQGLSIAEFVEAVRSKGRSG-LCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINAN  139 (523)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~-~~~Ef~~l~~~~~~~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINAs  139 (523)
                      ...++.++|++++.+....+ +.+||+.|...+.++++..+..++|..||||.||+||||+||+|+..++ +.+||||||
T Consensus         6 ~~~~~~~~f~~~~~~~~~~~~i~~E~~~i~~~~~~~~~~~~~~~~N~~kNRy~di~p~D~sRV~L~~~~~-~~~dYINAs   84 (312)
T PHA02747          6 FAECRAIDFLKRRNQLNCFGIIRDEHHQIILKPFDGLIANFEKPENQPKNRYWDIPCWDHNRVILDSGGG-STSDYIHAN   84 (312)
T ss_pred             ccccCHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCChhhhhhCchhhccCCCCCCCCCCCCEeEecCCCC-CCCCcEEee
Confidence            35689999999998876554 7899999987777888888999999999999999999999999987654 468999999


Q ss_pred             ccCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcc-cCCccccccccCCCCCCeeEecceeEEEeEEEeCC
Q psy15394        140 FVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVI-ERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP  218 (523)
Q Consensus       140 ~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~-E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~  218 (523)
                      ||+|+..+++|||||||+++|++|||+||||++|.+|||||.+. |.|+.||.+|||.+.++.+.+|+|.|++.++....
T Consensus        85 yV~g~~~~~~yIaTQ~Pl~~T~~dFW~MVwe~~~~~IVMLt~~~~e~g~~kc~~YWp~~~~~~~~~g~~~V~~~~~~~~~  164 (312)
T PHA02747         85 WIDGFEDDKKFIATQGPFAETCADFWKAVWQEHCSIIVMLTPTKGTNGEEKCYQYWCLNEDGNIDMEDFRIETLKTSVRA  164 (312)
T ss_pred             eecCCCCCCeEEEeCCCcchhHHHHHHHHHhccCCEEEEcccccccCCcccccccCCCCCCCCeEeeeEEEEEEEEEecC
Confidence            99999999999999999999999999999999999999999999 89999999999988788899999999999999899


Q ss_pred             CceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCc
Q psy15394        219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIG  298 (523)
Q Consensus       219 ~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvG  298 (523)
                      +|+.|.|.|++...+++|.|+||||++|||+|+|.++..+++|+..|+..+.......   ....+..+|||||||||+|
T Consensus       165 ~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~~~P~~~~~~l~fi~~v~~~~~~~~~~~---~~~~~~~~PIvVHCsaGvG  241 (312)
T PHA02747        165 KYILTLIEITDKILKDSRKISHFQCSEWFEDETPSDHPDFIKFIKIIDINRKKSGKLF---NPKDALLCPIVVHCSDGVG  241 (312)
T ss_pred             CeEEEEEEEEECCCCCceEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHhhccc---cccccCCCCEEEEecCCCc
Confidence            9999999999877789999999999999999999999999999998887654321110   0011234799999999999


Q ss_pred             hhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHH---HHHHHHHHHH
Q psy15394        299 RTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFC---HLALIEYALS  355 (523)
Q Consensus       299 RTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fi---y~alle~~~~  355 (523)
                      |||||||+|++++++..++.+||+++|+.||+||++||||.+||.||   |++|.+|+..
T Consensus       242 RtGtfcaidi~i~~l~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~~~~Y~~l~~~~~~  301 (312)
T PHA02747        242 KTGIFCAVDICLNQLVKRKAICLAKTAEKIREQRHAGIMNFDDYLFIQPGYEVLHYFLSK  301 (312)
T ss_pred             chhHHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999   9999988764


No 5  
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=100.00  E-value=2.6e-74  Score=587.87  Aligned_cols=290  Identities=31%  Similarity=0.559  Sum_probs=260.6

Q ss_pred             cccCHHHHHHHHHhcChh-hHHHHHhhcccCCCCcchhhhccccccCCCCCCCCCCCCCCeeeecCCC------------
Q psy15394         62 QGLSIAEFVEAVRSKGRS-GLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQD------------  128 (523)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~-~~~~Ef~~l~~~~~~~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~------------  128 (523)
                      ..++..+|++.+.+.+.. -+.+||.+|...+..+++..+..++|..||||.||+|||||||+|+...            
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~e~~~i~~~~~~~t~~~~~~~~N~~KNRy~di~p~D~sRV~L~~~~~~~~~~~~~~~~   86 (323)
T PHA02746          7 EIFNAFDFFDKTNHAKFCEFVLLEHAEVMDIPIRGTTNHFLKKENLKKNRFHDIPCWDHSRVVINAHESLKMFDVGDSDG   86 (323)
T ss_pred             ccCCHHHHHHHhcCCCHHHHHHHHHHHHhcCCCCcchhhccChhhccccCCCCCCCCcCCEEEecCCCCccccccccccc
Confidence            458899999998776644 4789999999888888999999999999999999999999999998743            


Q ss_pred             -------CCCCCCceeeeccCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCe
Q psy15394        129 -------DVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTK  201 (523)
Q Consensus       129 -------~~~~sdYINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~  201 (523)
                             +++++||||||||+|+..+++|||||||+++|+.|||+||||+++.+|||||.+. .++.||.+|||.+.+..
T Consensus        87 ~~~~~~~~~~~~dYINAsyV~g~~~~~~fIaTQ~Pl~~T~~dFW~MIwe~~v~vIVMLt~~~-e~~~kc~~YWP~~~~~~  165 (323)
T PHA02746         87 KKIEVTSEDNAENYIHANFVDGFKEANKFICAQGPKEDTSEDFFKLISEHESQVIVSLTDID-DDDEKCFELWTKEEDSE  165 (323)
T ss_pred             cccccccCCCCCCeEEEecccCCCCCCeEEEeCCCChhhHHHHHHHHHhhCCCEEEEecccc-cCCccCCCCCCCCCCCC
Confidence                   2345899999999999988999999999999999999999999999999999985 56789999999988888


Q ss_pred             eEecceeEEEeEEEeCCCceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy15394        202 MTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWA  281 (523)
Q Consensus       202 ~~~g~~~V~~~~~~~~~~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~  281 (523)
                      ..||+|.|++.+.....+|+.+.|.|++...+++|.|+||||++|||+|+|.++..+++|++.|+..+.........   
T Consensus       166 ~~~g~~~V~~~~~~~~~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~---  242 (323)
T PHA02746        166 LAFGRFVAKILDIIEELSFTKTRLMITDKISDTSREIHHFWFPDWPDNGIPTGMAEFLELINKVNEEQAELIKQADN---  242 (323)
T ss_pred             eEEcCEEEEEEEEEEcCCeEEEEEEEEECCCCCceEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHhhhhcc---
Confidence            99999999999888888999999999987778899999999999999999999999999999999876543222111   


Q ss_pred             CCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHH
Q psy15394        282 GHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS  355 (523)
Q Consensus       282 ~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~  355 (523)
                      ..+..+|||||||+|+||||||||+|+++++++.++.+||+++|+.||+||++||||.+||.|||++|.+|+..
T Consensus       243 ~~~~~~PIvVHCsaGvGRTGtfcaid~~l~~l~~~~~vdv~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~~l~~  316 (323)
T PHA02746        243 DPQTLGPIVVHCSAGIGRAGTFCAIDNALEQLEKEKEVCLGEIVLKIRKQRHSSVFLPEQYAFCYKALKYAIIE  316 (323)
T ss_pred             CCCCCCCEEEEcCCCCCcchhHHHHHHHHHHHHhcCCCCHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHH
Confidence            11234799999999999999999999999999999999999999999999999999999999999999999874


No 6  
>PHA02738 hypothetical protein; Provisional
Probab=100.00  E-value=8.9e-74  Score=583.28  Aligned_cols=289  Identities=37%  Similarity=0.640  Sum_probs=256.8

Q ss_pred             cccCHHHHHHHHHhcChh-hHHHHHhhcccCCCCcchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCceeeec
Q psy15394         62 QGLSIAEFVEAVRSKGRS-GLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANF  140 (523)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~-~~~~Ef~~l~~~~~~~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINAs~  140 (523)
                      ..++.++|++.+++.... -+.+||+.|......+++..+.  .|..||||.||+|||++||+|+...  ..+|||||||
T Consensus         7 ~~~~~~~fl~~~~~~~~~~~i~~E~~~i~~~~~~~t~~~~~--~N~~kNR~~~v~~~d~sRV~L~~~~--~~~dYINAsy   82 (320)
T PHA02738          7 RELKYAEFLALMEKSDCEEVITREHQKVISEKVDGTFNAEK--KNRKLNRYLDAVCFDHSRVILPAER--NRGDYINANY   82 (320)
T ss_pred             ccCCHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCcchhHHH--HhhhhCCCCCcCCCcCCEEEeCCCC--CCCCceEeEE
Confidence            468899999999877654 5788999997766677776654  3999999999999999999997654  3689999999


Q ss_pred             cCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEeCCCc
Q psy15394        141 VDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDY  220 (523)
Q Consensus       141 I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~~~  220 (523)
                      |+|+..+++|||||||+++|++|||+||||++|.+|||||...|.++.+|++|||.+.+..+.||+|+|++.++...++|
T Consensus        83 Vdg~~~~~kfI~TQ~Pl~~T~~dFW~MVwe~~v~~IVmL~~~~E~~~~kc~~YWp~~~~~~~~~g~f~V~~~~~~~~~~~  162 (320)
T PHA02738         83 VDGFEYKKKFICGQAPTRQTCYDFYRMLWMEHVQIIVMLCKKKENGREKCFPYWSDVEQGSIRFGKFKITTTQVETHPHY  162 (320)
T ss_pred             ecCCCCCceeEEecCCChHHHHHHHHHHHHhCCcEEEEeeehhhCCeeeccccCCCCCCCceEeccEEEEEEEEEecCCe
Confidence            99999999999999999999999999999999999999999999999999999999888899999999999999999999


Q ss_pred             eEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchh
Q psy15394        221 VLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRT  300 (523)
Q Consensus       221 ~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRT  300 (523)
                      +.+.|.|++ +++++|.|+||||++|||+|+|.++..|++|+..|+..+..+..............+|||||||+|+|||
T Consensus       163 ~~~~l~l~~-~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~~~~~~PIVVHCs~GiGRt  241 (320)
T PHA02738        163 VKSTLLLTD-GTSATQTVTHFNFTAWPDHDVPKNTSEFLNFVLEVRQCQKELAQESLQIGHNRLQPPPIVVHCNAGLGRT  241 (320)
T ss_pred             EEEEEEEEe-CCCCcEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccCccccCCCCeEEEcCCCCChh
Confidence            999999987 4678999999999999999999999999999999998765432211100011112479999999999999


Q ss_pred             hHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHH
Q psy15394        301 GTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS  355 (523)
Q Consensus       301 Gtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~  355 (523)
                      |||||+|++++++..++.+||+++|+.||+||++||||.+||.|||++|++|+..
T Consensus       242 GtFcaidi~i~~~~~~~~vdv~~~V~~lR~qR~~~vqt~~QY~F~y~~l~~y~~~  296 (320)
T PHA02738        242 PCYCVVDISISRFDACATVSIPSIVSSIRNQRYYSLFIPFQYFFCYRAVKRYVNL  296 (320)
T ss_pred             hhhhHHHHHHHHHHhcCCcCHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999873


No 7  
>KOG0790|consensus
Probab=100.00  E-value=1.8e-71  Score=553.45  Aligned_cols=281  Identities=39%  Similarity=0.698  Sum_probs=246.1

Q ss_pred             ccCHHHHHHHHHhc---------ChhhHHHHHhhcccCCCC--cchhhhccccccCCCCCCCCCCCCCCeeeecCC-CCC
Q psy15394         63 GLSIAEFVEAVRSK---------GRSGLCLEYEGFKIKPPD--GSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQ-DDV  130 (523)
Q Consensus        63 ~~~~~~~~~~~~~~---------~~~~~~~Ef~~l~~~~~~--~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~-~~~  130 (523)
                      -|+++++..++...         .+.||++||+.|+.....  .+-.....++|+.||||.||+||||+||+|... ++.
T Consensus       219 rI~Aa~i~~Rve~l~k~~e~~d~~k~GfwEEFesLqq~~~~~~~sr~EG~r~eN~~KNRYkNIlPfDHtRViL~d~~~n~  298 (600)
T KOG0790|consen  219 RINAADIENRVEELNKKQESEDTAKAGFWEEFESLQQQEVKNLHSRLEGQRPENKGKNRYKNILPFDHTRVILQDRDPNI  298 (600)
T ss_pred             chhhhhHHHHHHHHhccccchhhhhcchhHHHHHhhhhhhHhhhhhhccccchhhccccccccCcccceeeEeecCCCCC
Confidence            35666666666432         245899999999754332  244467789999999999999999999999876 457


Q ss_pred             CCCCceeeeccCC--------cccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCee
Q psy15394        131 PGSDYINANFVDG--------YKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKM  202 (523)
Q Consensus       131 ~~sdYINAs~I~g--------~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~  202 (523)
                      +++||||||||--        ...++.||||||-|.+|+.|||+||||+++++|||.|...|.|+.||.+|||+ ++...
T Consensus       299 pgsdYINAnyi~~~~q~~~~~~~~kKsyIAtQGCL~nTVnDFW~MvwQENsrVIVMtTkE~ERgK~KC~~YWPe-e~~~e  377 (600)
T KOG0790|consen  299 PGSDYINANYIMIEFQRLCNNSKPKKSYIATQGCLQNTVNDFWRMVWQENSRVIVMTTKEVERGKSKCVKYWPE-EGALE  377 (600)
T ss_pred             ccchhcccchhhhhhhhccCccccccceeehhhHHHHHHHHHHHHHHhccceEEEEehhhhhcccccccccCCc-ccchh
Confidence            8999999999831        12346899999999999999999999999999999999999999999999995 57889


Q ss_pred             EecceeEEEeEEEeCCCceEEEeeeeccC-CCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy15394        203 THGDFLVTTECVTSSPDYVLSSLTLCNTK-TLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWA  281 (523)
Q Consensus       203 ~~g~~~V~~~~~~~~~~~~~r~l~l~~~~-~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~  281 (523)
                      .||.+.|+|..+....+|+.|+|.+.... +...|.|+||||..|||||||.+|-.+|+|+..|+..+..+         
T Consensus       378 ~~G~~~v~~v~E~~t~dY~LR~l~vs~~~~g~~~R~I~~yh~~tWPDHGvP~dPg~vLnFLe~V~~rq~~l---------  448 (600)
T KOG0790|consen  378 EYGVMRVRNVKESDTHDYTLRELKVSKLGNGNLEREIWHYHYLTWPDHGVPSDPGGVLNFLEEVNHRQESL---------  448 (600)
T ss_pred             hcCceEEEeccccccccceehheeeccccCCcchhhhhhhheeecccCCCcCCccHHHHHHHHhhhhhccc---------
Confidence            99999999999999999999999998543 45689999999999999999999999999999999886532         


Q ss_pred             CCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCC---ccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHH
Q psy15394        282 GHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG---TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS  355 (523)
Q Consensus       282 ~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~---~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~  355 (523)
                        ...+|||||||||||||||||+||++++++.+.|   .+||..+|..+|.||.|||||..||.|+|.||..|+..
T Consensus       449 --~~AgpIvVHCSAGIGrTGTfiViD~lld~I~~~Gldc~iDi~ktIqmVRsqRSGmVQTEaQYkFiY~Avqhyiet  523 (600)
T KOG0790|consen  449 --MDAGPIVVHCSAGIGRTGTFIVIDMLLDQIREKGLDCDIDIQKTIQMVRSQRSGMVQTEAQYKFIYVAVQHYIET  523 (600)
T ss_pred             --cccCcEEEEccCCcCCcceEEEhHHHHHHHHhcCCCCcccHHHHHHHHHHHhcchhhhHHhHHHHHHHHHHHHHH
Confidence              2457999999999999999999999999998876   58999999999999999999999999999999999973


No 8  
>KOG0792|consensus
Probab=100.00  E-value=9.6e-69  Score=581.02  Aligned_cols=284  Identities=38%  Similarity=0.603  Sum_probs=259.1

Q ss_pred             ccCHHHHHHHHHhcChh-hHHHHHhhcccCCCCcchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCceeeecc
Q psy15394         63 GLSIAEFVEAVRSKGRS-GLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFV  141 (523)
Q Consensus        63 ~~~~~~~~~~~~~~~~~-~~~~Ef~~l~~~~~~~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINAs~I  141 (523)
                      ..+.++-+..+++.-.+ ++..||+.|..+.+.+.+.+|.+++|..||||.||+|||.|||.|.+..+ .+.+|||||+|
T Consensus       851 r~~~dks~~~L~~~L~~g~v~~efE~i~rkkp~~~~~~a~lpeN~~KNRyrdvlPYD~tRV~L~~~~~-~nagYINAS~i  929 (1144)
T KOG0792|consen  851 RASLDKSCIILAQGLEDGMVFTEFEQIYRKKPGMACSIARLPENAPKNRYRDVLPYDDTRVELQPSKD-NNAGYINASHI  929 (1144)
T ss_pred             ccchhhHHHHHHhhhhcCchHHHHHHHhhhCCCceeeeccccccccccccCCcCCCcCceeeeccCCC-CCcccccceee
Confidence            34566667776665444 47899999988889999999999999999999999999999999998763 47899999999


Q ss_pred             CCc--ccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEeCCC
Q psy15394        142 DGY--KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPD  219 (523)
Q Consensus       142 ~g~--~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~~  219 (523)
                      +-.  ...+.||||||||++|+.|||+||||+++.+|||||...|.|+.||++|||...-+++.||.|.|+|...+....
T Consensus       930 ~ipvgg~e~~YIA~QGPLp~T~~DFWQMVWEQ~~~lIvMlT~e~EggR~KchqYWPr~~~~t~~ygrf~v~~~~~~~t~~ 1009 (1144)
T KOG0792|consen  930 EIPVGGIENRYIACQGPLPHTCTDFWQMVWEQGSTLIVMLTTEVEGGRVKCHQYWPRLGHETMEYGRFQVTCVFEQQTTC 1009 (1144)
T ss_pred             EeeecceeEEEEEecCCCcchHHHHHHHHHhcCceEEEEEeehhhcCeeccccccCCCCccceeccceEEEEEEeccccc
Confidence            844  235789999999999999999999999999999999999999999999999876678999999999999999999


Q ss_pred             ceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCch
Q psy15394        220 YVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGR  299 (523)
Q Consensus       220 ~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGR  299 (523)
                      |+.|.++|.+..+++.|+|+|+||++|||||+|.++..||+|++.|+..+..             .++|||||||||+||
T Consensus      1010 y~tr~m~l~~~~t~eeR~V~hLQYtaWPDHg~P~D~~~FL~FleevrsvR~~-------------t~pPilvHCSAGiGR 1076 (1144)
T KOG0792|consen 1010 YVTREMTLKDLQTREERTVWHLQYTAWPDHGVPDDPNDFLDFLEEVRSVRRG-------------TNPPILVHCSAGIGR 1076 (1144)
T ss_pred             EEEEeEEEeeccCCceeeeeeeeecccccCCCCCChHHHHHHHHHHHHHhcc-------------CCCCeEEEccCCCCc
Confidence            9999999999999999999999999999999999999999999999987641             256999999999999


Q ss_pred             hhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHHcCCCC
Q psy15394        300 TGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLIS  360 (523)
Q Consensus       300 TGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~~~~~~  360 (523)
                      ||++|++|.++-.++.+..+||.++|+.||.||++||||..||.|||++|+.++.+..++.
T Consensus      1077 TGVlIl~e~~l~lle~Ne~vdi~divr~mR~QR~~mVQT~~QYkFVyevil~~l~~~~l~~ 1137 (1144)
T KOG0792|consen 1077 TGVLILMETALCLLEHNEPVDILDIVRTMRDQRAMMVQTLSQYKFVYEVILRVLKRGRLIP 1137 (1144)
T ss_pred             ceehHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhccchHHhhHHHHHHHHHHHhccccc
Confidence            9999999999999999999999999999999999999999999999999999988655543


No 9  
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=100.00  E-value=2.6e-66  Score=516.01  Aligned_cols=256  Identities=49%  Similarity=0.816  Sum_probs=238.9

Q ss_pred             HHHHHhhcccCCCC-cchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCceeeeccCCcccccceeecCCCCCC
Q psy15394         81 LCLEYEGFKIKPPD-GSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQN  159 (523)
Q Consensus        81 ~~~Ef~~l~~~~~~-~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINAs~I~g~~~~~~yIatQ~Pl~~  159 (523)
                      +.+||+.|...... .++..+..++|..||||.||+|||++||+|...++ ..+||||||||+|+..+++||+||+|+++
T Consensus         2 ~~~e~~~i~~~~~~~~~~~~~~~~~n~~kNR~~~v~~~d~~RV~l~~~~~-~~~~YInAs~v~~~~~~~~fI~tQ~P~~~   80 (258)
T smart00194        2 LEEEFEKLDRLKPDDESCTVAARPENRDKNRYKDVLPYDHTRVKLTPPPG-EGSDYINASYIDGPNGPKAYIATQGPLPS   80 (258)
T ss_pred             hHHHHHHhhccCCCCccccccCCccccccCCCCCCCCCCCCEeEccCCCC-CCCCceeeeeEecCCCccceEEeCCCchH
Confidence            67899999876655 77888999999999999999999999999987653 56899999999999888999999999999


Q ss_pred             CHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEeCCCceEEEeeeeccCCCceeEEE
Q psy15394        160 TVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVA  239 (523)
Q Consensus       160 T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~l~~~~~~~~r~V~  239 (523)
                      |++|||+||||+++.+|||||...|.++.+|.+|||.+. +...||.|+|++.+.+...+++.|+|.|++.+.++++.|+
T Consensus        81 t~~dFW~mv~~~~~~~IVmL~~~~e~~~~~~~~Ywp~~~-~~~~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v~  159 (258)
T smart00194       81 TVEDFWRMVWEEKVTTIVMLTELEEKGREKCAQYWPEEE-EPLTYGDITVTLKSVEKVDDYTIRTLEVTNTGCSETRTVT  159 (258)
T ss_pred             HHHHHHHHHHhcCCCEEEEeccceeCCEeeccccCCCCC-CcceECCEEEEEEEEEecCCEEEEEEEEEECCCCCcEEEE
Confidence            999999999999999999999999999999999999986 6899999999999999999999999999987778999999


Q ss_pred             EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCcc
Q psy15394        240 HYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTV  319 (523)
Q Consensus       240 h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v  319 (523)
                      ||||++|||+|+|.++..+++|++.|+.....             ..+||+|||++|+||||+|||++++++++..++.+
T Consensus       160 ~~~y~~W~d~~~P~~~~~~~~~i~~v~~~~~~-------------~~~pivVHC~~G~gRsg~f~a~~~~~~~l~~~~~v  226 (258)
T smart00194      160 HYHYTNWPDHGVPESPKSILDLVRAVRKSQST-------------STGPIVVHCSAGVGRTGTFIAIDILLQQLEAGKEV  226 (258)
T ss_pred             EEeeCCCCCCCCCCCHHHHHHHHHHHHHhhcc-------------CCCCEEEEeCCCCCccchhhHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999986421             25799999999999999999999999999999999


Q ss_pred             CHHHHHHHHHhccccCccChhHHHHHHHHHHH
Q psy15394        320 DVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE  351 (523)
Q Consensus       320 dv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle  351 (523)
                      |+.++|+.||+||++||++.+||.|||.+|++
T Consensus       227 ~v~~~v~~lR~~R~~~v~~~~Qy~f~~~~l~~  258 (258)
T smart00194      227 DIFEIVKELRSQRPGMVQTEEQYIFLYRAILE  258 (258)
T ss_pred             CHHHHHHHHHhccccccCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999874


No 10 
>KOG0791|consensus
Probab=100.00  E-value=4.9e-66  Score=509.88  Aligned_cols=280  Identities=38%  Similarity=0.673  Sum_probs=260.0

Q ss_pred             CCcccCHHHHHHHHHhcC---hhhHHHHHhhcccCCCCcchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCce
Q psy15394         60 SSQGLSIAEFVEAVRSKG---RSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYI  136 (523)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~---~~~~~~Ef~~l~~~~~~~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYI  136 (523)
                      .+.++++++|..+.....   .-+|.+||++|+...-+.+...|.++.|..||||.||+|||+|||+|++..+.+++|||
T Consensus        74 ~s~~i~len~e~~~~~~~~dsn~~f~eey~~lk~~g~~~~~~aA~l~~n~~knr~~nilpYd~Srvkl~~~~e~~~~DYi  153 (374)
T KOG0791|consen   74 LTNPVSLENFELHVKKMSADSNYKFSEEYNELKLVGLDQSKLAALLPLNRPKNRYTNILPYDNSRVKLSPVNEEEGSDYI  153 (374)
T ss_pred             cCCceeeccchhhhhhcccccchhhHHHHhhhhhhcccchhhhhhcCCCCCcCCcCCCCCcccccceeccccccchhhhh
Confidence            345789999999987654   45799999999876666778889999999999999999999999999998889999999


Q ss_pred             eeeccCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEe
Q psy15394        137 NANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTS  216 (523)
Q Consensus       137 NAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~  216 (523)
                      |||||+|+..++.|||||||+++|.++||+||||+++.+|||||...|.++.||..|||.+.. ...+|+++|+...+..
T Consensus       154 nA~~~Pg~~s~~~fIAtQGPlp~t~~~fW~mvwq~~~~~IVmlt~~~e~~R~kc~~ywP~~~~-~~~~gdi~V~~v~e~~  232 (374)
T KOG0791|consen  154 NASYIPGYNSPREFIATQGPLPETRDDFWKMVWQQKSHIIVMLTKCNEKGRVKCDEYWPDEEV-PVAYGDITVTMVSEES  232 (374)
T ss_pred             hhhhcCCCCCcceEEEeeCCCCCChhHHHHHHHHhhcceEEEEeecccccchhhhhhcccccc-cceeccEEEEEechhh
Confidence            999999999999999999999999999999999999999999999999999999999999864 4899999999999999


Q ss_pred             CCCceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCC
Q psy15394        217 SPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAG  296 (523)
Q Consensus       217 ~~~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaG  296 (523)
                      ..++.+|.|.+.  ..+++|.++||||+.|||||+|..+..++.|++.++..-..             ..+|++||||||
T Consensus       233 ~~~w~ir~~~l~--~~~~sr~ir~f~y~~wPd~gvp~~~~sl~~f~~~~r~~~~~-------------~~~p~iVhCSAG  297 (374)
T KOG0791|consen  233 LDEWTIREFRLN--YAGESRKIRHFHYTAWPDFGVPSSTESLLQFVRMVRQSLDT-------------SKGPTIVHCSAG  297 (374)
T ss_pred             cCCceEEEEeee--cccccceeEEEEEeeccccCCCCCchhHHHHHHHHHhhccc-------------CCCceeEEeecc
Confidence            999999999997  56789999999999999999999999999999999986421             257999999999


Q ss_pred             CchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHH
Q psy15394        297 IGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS  355 (523)
Q Consensus       297 vGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~  355 (523)
                      +||||||+|+|.+++++..+..+|++++|..||.+|+.||||.+||+|+|.++++.+..
T Consensus       298 VgRTGTFiald~LLqq~~~~~~vdi~~iv~~lR~~R~~mVqte~Qyvfl~~c~~~~l~~  356 (374)
T KOG0791|consen  298 VGRTGTFIALDRLLQQIDSEETVDIFGVVLELRSARMLMVQTEDQYVFLHQCVLESLQG  356 (374)
T ss_pred             cccccchHhHHHHHHHhcccccccHHHHHHHhhhccccccchHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999998764


No 11 
>KOG0793|consensus
Probab=100.00  E-value=2.5e-64  Score=523.07  Aligned_cols=322  Identities=34%  Similarity=0.545  Sum_probs=275.4

Q ss_pred             cccccccCCCCCCCcccccccchhhhcccccCCC----CCCccCCCCCCCCcc---cCH---HHHHHHHHh--cChhhHH
Q psy15394         15 LSKKRKAETSPSAWPEAMKVEIEDAVKRVRFSDD----DSLHADPTGTSSSQG---LSI---AEFVEAVRS--KGRSGLC   82 (523)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~---~~~~~~~~~--~~~~~~~   82 (523)
                      ||++||+-. ++.+++.. ...+-++.|+.|+|.    .|.+...++|+....   |.+   +..+.+++.  +.+..|.
T Consensus       658 LCRqrma~k-~~~ra~gp-~~srissvssqfsdg~~pspss~SSTsSW~EEpA~~nmDISTGHmiLsymedhLrnk~rle  735 (1004)
T KOG0793|consen  658 LCRQRMATK-PPDRAEGP-HTSRISSVSSQFSDGPIPSPSSRSSTSSWSEEPAQSNMDISTGHMILSYMEDHLRNKNRLE  735 (1004)
T ss_pred             HHHHHhccC-CCCCcCCC-CCcccccchhhcccCCCCCCccccCCccccccccccccccccchhHHHHHHHHhhCchHHH
Confidence            789998877 44444432 455778889999987    344666667775322   222   344444432  2456799


Q ss_pred             HHHhhcccCCC-CcchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCceeeeccCCcc-cccceeecCCCCCCC
Q psy15394         83 LEYEGFKIKPP-DGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYK-QKNAFISTQGPMQNT  160 (523)
Q Consensus        83 ~Ef~~l~~~~~-~~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINAs~I~g~~-~~~~yIatQ~Pl~~T  160 (523)
                      +||+.|..... ..+...++.++|..|||...++||||+||.|+......++||||||+|-..+ ....|||||||++.|
T Consensus       736 keWealc~YqaEpn~r~~aq~e~~a~kNR~~a~LpyDhsrV~l~~~~s~s~~dYiNAS~I~DhDPR~paYIAtQgPl~st  815 (1004)
T KOG0793|consen  736 KEWEALCAYQAEPNSRFVAQREENAPKNRSLAVLPYDHSRVLLKAENSHSHSDYINASPIMDHDPRNPAYIATQGPLPST  815 (1004)
T ss_pred             HHHHHHHHhhcCcchhhhhcccccccccCCCCccccccceeeeccccCccccccccccccccCCCCccceeeccCCCchH
Confidence            99999985332 3456788999999999999999999999999998888899999999996554 346799999999999


Q ss_pred             HHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEe-CCCceEEEeeeeccCCCceeEEE
Q psy15394        161 VEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTS-SPDYVLSSLTLCNTKTLETRMVA  239 (523)
Q Consensus       161 ~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~-~~~~~~r~l~l~~~~~~~~r~V~  239 (523)
                      +.|||+||||++|.+|||||.+.|+|..+|.+|||++  +...|+-|.|.+.++.. ..||.+|.|-++|..++++|+|+
T Consensus       816 iA~FWQmvWe~G~~vIV~Lt~l~Engv~qc~rYWPde--GselyhiyEV~LVSEHIWceDfLVRSFYLKNlqtseTRTvT  893 (1004)
T KOG0793|consen  816 IADFWQMVWESGCVVIVMLTPLAENGVRQCYRYWPDE--GSELYHIYEVNLVSEHIWCEDFLVRSFYLKNLQTSETRTVT  893 (1004)
T ss_pred             HHHHHHHHHHcCcEEEEEecChhhcchhhhhhcCCCC--CcceeeeEEeeeehhhhhhhhHHHHHHHHhhcccccceeee
Confidence            9999999999999999999999999999999999986  46678999999998875 67999999999999999999999


Q ss_pred             EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCC-Cc
Q psy15394        240 HYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS-GT  318 (523)
Q Consensus       240 h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~-~~  318 (523)
                      +|||.+||+.|+|.+..+||+|.++|++++..             ++.|||||||+|.|||||+|+||+++.+|.+. +.
T Consensus       894 QFHfLSWp~egvPasarslLdFRRKVNK~YRG-------------RScpIiVH~sdGaGRTG~YiliDmvl~Rm~kGake  960 (1004)
T KOG0793|consen  894 QFHFLSWPDEGVPASARSLLDFRRKVNKCYRG-------------RSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGAKE  960 (1004)
T ss_pred             eeeeecccccCCccchHHHHHHHHHhhhhccC-------------CCCceEEEccCCCCccceeeeHHHHHHHHhccchh
Confidence            99999999999999999999999999998752             46899999999999999999999999998764 78


Q ss_pred             cCHHHHHHHHHhccccCccChhHHHHHHHHHHHHH
Q psy15394        319 VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA  353 (523)
Q Consensus       319 vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~  353 (523)
                      +||..++..||.||+|||+|.+||.|++.||+|-.
T Consensus       961 IDIaATlEHlRDQR~GmVaTkdQFef~l~aVAeEV  995 (1004)
T KOG0793|consen  961 IDIAATLEHLRDQRPGMVATKDQFEFALTAVAEEV  995 (1004)
T ss_pred             hhHHHHHHHHhhcCCcceeehhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999853


No 12 
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=100.00  E-value=2.8e-60  Score=465.04  Aligned_cols=231  Identities=55%  Similarity=0.917  Sum_probs=216.1

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCCCCCCCceeeeccCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCC
Q psy15394        107 FKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERG  186 (523)
Q Consensus       107 ~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~  186 (523)
                      .||||.|++|||++||+|.... ...+||||||||+|+..+++||+||+|+++|++|||+|||++++.+||||+...|.+
T Consensus         1 ~knR~~~~~~~d~~rV~l~~~~-~~~~~yinA~~v~~~~~~~~fI~tQ~P~~~t~~~FW~mv~~~~~~~IV~l~~~~e~~   79 (231)
T cd00047           1 KKNRYKDILPYDHTRVKLKPDD-DEGSDYINASYIDGYNPPKAYIATQGPLPNTVEDFWRMVWEQKVPVIVMLTELVEKG   79 (231)
T ss_pred             CCCCCCCCCCCCCCEEEccCCC-CCCCCcEEeeeEecCCCCcceEEcCCCChhhHHHHHHHHHhcCCCEEEEccccccCC
Confidence            5899999999999999998753 246799999999999988999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCeeEecceeEEEeEEEeCCCceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHH
Q psy15394        187 RNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKAR  266 (523)
Q Consensus       187 ~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~  266 (523)
                      ..+|.+|||.+. +...||.|+|++.+.+...+++.|+|+|++.+.+++|.|+||||++|||+++|.+...+++|++.++
T Consensus        80 ~~~~~~Ywp~~~-~~~~~g~~~V~~~~~~~~~~~~~~~l~i~~~~~~~~~~V~~~~~~~W~d~~~p~~~~~~~~~~~~v~  158 (231)
T cd00047          80 REKCAQYWPEEE-GSLTYGDITVTLVSEEKLDDYTVRTLKLSNTGTGETRTVTHFQYTGWPDHGVPESPDSLLDLLRKVR  158 (231)
T ss_pred             CccCccCCCCCC-CCeEecCEEEEEEEEEEcCCEEEEEEEEEECCCCCceEEEEEeECCCCCCCccCChHHHHHHHHHHH
Confidence            999999999987 7899999999999999999999999999987778999999999999999999999999999999998


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHH
Q psy15394        267 HTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH  346 (523)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy  346 (523)
                      .....            ...+||+|||++|+||||+|||++++++++..++.+|+.++++.||+||+++|++.+||.|||
T Consensus       159 ~~~~~------------~~~~pivVHC~~G~gRsg~~~a~~~~~~~~~~~~~~~~~~~v~~iR~~R~~~v~~~~Qy~f~~  226 (231)
T cd00047         159 KSQQQ------------PGSGPIVVHCSAGVGRTGTFIAIDILLQRLEAEGVVDIFQTVKELRSQRPGMVQTEEQYIFLY  226 (231)
T ss_pred             HHhcc------------CCCCCeEEECCCCCCccchHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHHH
Confidence            76421            235799999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q psy15394        347 LALIE  351 (523)
Q Consensus       347 ~alle  351 (523)
                      .+|++
T Consensus       227 ~~l~~  231 (231)
T cd00047         227 RAILE  231 (231)
T ss_pred             HHHhC
Confidence            99874


No 13 
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00  E-value=8e-60  Score=445.54  Aligned_cols=238  Identities=34%  Similarity=0.596  Sum_probs=203.4

Q ss_pred             chhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCceeeeccCCcccccceeecCCCCCCCHHHHHHHHHhcCC--
Q psy15394         96 SFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQT--  173 (523)
Q Consensus        96 ~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v--  173 (523)
                      +......+.|..||||.||+||++|||+|+...  ..+||||||||+...  .+|||||||+++|+.|||+|||....  
T Consensus        44 s~~~sls~~~~~rNRYsnIvPYe~tRV~Lk~~k--~~~DYINAS~ik~~~--~~yIAtQgP~~~t~ddFW~mvw~n~~~~  119 (302)
T COG5599          44 SDDTSLSSTNYARNRYSNIVPYEHTRVHLKYGK--SINDYINASYIKTPR--GKYIATQGPKPETIDDFWKMVWHNVPNN  119 (302)
T ss_pred             ccccccCccccccccccccccccCceeeccCCC--chhhcccceeeecCC--CceEEecCCCCchHHHHHHHHHhcCCCc
Confidence            344566788999999999999999999998763  468999999999665  45999999999999999999999988  


Q ss_pred             cEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEe--CCCceEEEeeeeccCCCceeEEEEEEEeeeccCCC
Q psy15394        174 LVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTS--SPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGV  251 (523)
Q Consensus       174 ~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~--~~~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gv  251 (523)
                      .+||||+++.|.++.||.+|||...+....+|...+.-.+.+.  ..-+..+.++|+... +..+.|.||+|.+|+|.+.
T Consensus       120 gvIVmLt~l~E~~rekc~qYWp~~~~~~~~~G~~v~~~~~~e~~~d~~~~~~~f~L~~~~-~~~k~Ihhf~y~nW~D~~~  198 (302)
T COG5599         120 GVIVMLTSLPEYNREKCDQYWPLGYDDTLIIGLRVIKQKKYELFNDNIVNVHNFELTSIN-GPPKKIHHFQYINWVDFNV  198 (302)
T ss_pred             eEEEEecChHHHhHHHHhhhCCCCcCcceeeeeEEEEEecccccccceeeeeecccccCC-CCccEEEEEEecCccccCC
Confidence            9999999999999999999999888888888966555554443  234667888888654 8899999999999999999


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCC--------CccC-HH
Q psy15394        252 PESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS--------GTVD-VR  322 (523)
Q Consensus       252 P~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~--------~~vd-v~  322 (523)
                      | +...+.++++.+...              +-+.+|++||||||+||||||+|+|.++++....        -..| |+
T Consensus       199 p-~i~sl~~~~~sl~~s--------------p~~t~piiVHCSAGvGRTGTFIalD~ll~~~~~~~~~t~~~~~t~D~if  263 (302)
T COG5599         199 P-DIRSLTEVIHSLNDS--------------PVRTGPIIVHCSAGVGRTGTFIALDILLRMPNDTLNHTDTWEDTQDLIF  263 (302)
T ss_pred             c-CHHHHHHHHHHhhcC--------------cCCCCCEEEEeccCCCCcceeeeHHHHHhccccccCCCchhhhhhhHHH
Confidence            9 677777777666532              1157899999999999999999999999988654        2223 88


Q ss_pred             HHHHHHHhccccCccChhHHHHHHHHHHHHH
Q psy15394        323 GTVKRIRSQRAHSIQMRDQYIFCHLALIEYA  353 (523)
Q Consensus       323 ~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~  353 (523)
                      ++|..||+||+.|||+.+||.|||.+++++.
T Consensus       264 ~iV~~LRsQRmkmVQn~~Qf~flY~~~~~l~  294 (302)
T COG5599         264 QIVLSLRSQRMKMVQNKTQFKFLYDAFLELN  294 (302)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999987


No 14 
>PF00102 Y_phosphatase:  Protein-tyrosine phosphatase;  InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []:   (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases   Based on their cellular localisation, PTPases are also classified as:   Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases []   All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits.  This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=100.00  E-value=5.6e-58  Score=448.02  Aligned_cols=232  Identities=45%  Similarity=0.841  Sum_probs=212.4

Q ss_pred             ccCCCCCCCCCCCCCCeeeecCCCCCCCCCceeeeccCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCccc
Q psy15394        105 NLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIE  184 (523)
Q Consensus       105 N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E  184 (523)
                      |..|||+.||+|||++||+|++.++  .+||||||||+++...++||+||+|+++|++|||+|||+++|.+||||+...|
T Consensus         1 n~~knR~~~~~~~d~~rv~l~~~~~--~~~yi~A~~v~~~~~~~~~I~~q~P~~~t~~~FW~mv~~~~~~~Iv~L~~~~e   78 (235)
T PF00102_consen    1 NREKNRSPDILPYDDSRVKLNPSPG--DSDYINASYVDGYKNGKKFIVTQAPMPDTIEDFWQMVWEQKVQIIVMLCSFDE   78 (235)
T ss_dssp             GGGGSSSTTS-BBTTTEEETTTTTT--STTEESEEEEEESSSTEEEEEEES-SGGGHHHHHHHHHHTTBSEEEEESBSEE
T ss_pred             CCccCCCCCCCcCcceEEEecCCCC--ccchhhhhhhccccchhhheeecccccccccceehheeeccccceeccccccc
Confidence            7899999999999999999955432  35799999999998889999999999999999999999999999999999999


Q ss_pred             CCccccccccCCCCCCeeEecceeEEEe-EEE-eCCCceEEEeeeeccCCC-ceeEEEEEEEeeeccCCCCCChHHHHHH
Q psy15394        185 RGRNKCAQYWPGTEGTKMTHGDFLVTTE-CVT-SSPDYVLSSLTLCNTKTL-ETRMVAHYQFTAWLDYGVPESALSMLEF  261 (523)
Q Consensus       185 ~~~~kc~~YwP~~~~~~~~~g~~~V~~~-~~~-~~~~~~~r~l~l~~~~~~-~~r~V~h~~y~~Wpd~gvP~~~~~ll~f  261 (523)
                      .+..+|.+|||.+.++.+.+|+|+|++. +.. ...+++.|.|.|.+.+.. +++.|.||||.+||++++|.+...+++|
T Consensus        79 ~~~~~~~~y~P~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~v~~~~~~~W~~~~~P~~~~~~~~~  158 (235)
T PF00102_consen   79 SGDEKCDQYWPLKEGESLKFGDYTVKCKEKIEENSKHYTVRKLEVTNGKSKKKSRTVTHFHYTNWPDDGVPPSPESFLDF  158 (235)
T ss_dssp             TTEESS--TSTSSSSSEEEETTEEEEEEEEEEEEESSEEEEEEEEEETTTTEEEEEEEEEEEESSSSSSSGSSSHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccceEEeeccccccccccccccccceeeeeccccccccccchhhhh
Confidence            9999999999988899999999999999 665 778999999999987766 3899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhH
Q psy15394        262 LAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ  341 (523)
Q Consensus       262 i~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Q  341 (523)
                      ++.++...             ....+||+|||++|+||||+||+++++++++..++.+||.++++.||+||+++|++.+|
T Consensus       159 ~~~v~~~~-------------~~~~~pivVhc~~G~gRsg~f~~~~~~~~~~~~~~~~~v~~~~~~lR~~R~~~i~~~~q  225 (235)
T PF00102_consen  159 IRKVNKSK-------------DDPNGPIVVHCSDGVGRSGTFCAIDILIEQLKKEGEVDVFEIVKKLRQQRPGAIQSPEQ  225 (235)
T ss_dssp             HHHHHHHH-------------STTSSEEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTTSSSSHHH
T ss_pred             hhhccccc-------------cCCccceEeecccccccccccccchhhccccccccchhhHHHHHHHHhhCCCccCCHHH
Confidence            99999875             12467999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH
Q psy15394        342 YIFCHLALIE  351 (523)
Q Consensus       342 Y~Fiy~alle  351 (523)
                      |.|||.+++|
T Consensus       226 y~f~~~~~~e  235 (235)
T PF00102_consen  226 YRFCYMAVLE  235 (235)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhC
Confidence            9999999987


No 15 
>KOG4228|consensus
Probab=100.00  E-value=5.8e-56  Score=487.39  Aligned_cols=279  Identities=35%  Similarity=0.633  Sum_probs=247.0

Q ss_pred             CCcccCHHHHHHHHHhc-------ChhhHHHHHhhcccCCCC-cchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCC
Q psy15394         60 SSQGLSIAEFVEAVRSK-------GRSGLCLEYEGFKIKPPD-GSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVP  131 (523)
Q Consensus        60 ~~~~~~~~~~~~~~~~~-------~~~~~~~Ef~~l~~~~~~-~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~  131 (523)
                      +...+++.+|..++..+       +..++.+||+.|....+. ....++.+++|+.|||+.+|+|||++||.|.+..|. 
T Consensus       800 G~T~i~~~~~~~~~~~l~~~~p~~~~t~le~EF~~L~~~~~~~~~~~~~~l~~N~~KNR~~~i~P~d~~rv~L~~~~G~-  878 (1087)
T KOG4228|consen  800 GDTEVPASTLAPYSQKLKRIDPPENKTGLEEEFKTLNSCKPRTRMMICGNLPENKSKNRQVNILPYDRNRVILIPTHGE-  878 (1087)
T ss_pred             CCccccHHHHHHHHHHhccCCCCCCCcchHHHHHHHhhccccchhhhccccchhcccccccccCCchhcccceeccCCC-
Confidence            44578888888777543       245899999999754443 334458999999999999999999999999999986 


Q ss_pred             CCCceeeeccCCcccccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEE
Q psy15394        132 GSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTT  211 (523)
Q Consensus       132 ~sdYINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~  211 (523)
                      ++||||||+||||..+..|||||+||.+|++|||||||+++|.+||||+++.+.  .+|.||||.+  ....||.+.|..
T Consensus       879 ~sdYINAs~idgy~~~~~fivtq~PL~~T~~DFWrmi~d~~~tsiVmL~~l~~~--~~C~qyw~~~--g~~~yg~i~Ve~  954 (1087)
T KOG4228|consen  879 SSDYINASFIDGYRQPKAFIVTQGPLAETVEDFWRMIWDQNVTSIVMLTELKHP--EKCPQYWPPE--GSQRYGPIEVED  954 (1087)
T ss_pred             cccccchhhhcccCCcceEEEecCCcccchHHHHHHhhccceeEEEEecccCcc--cccccccCCc--CceecCcEEEEe
Confidence            899999999999999999999999999999999999999999999999999887  8999999984  468899999999


Q ss_pred             eEEEeCCCceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEE
Q psy15394        212 ECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIV  291 (523)
Q Consensus       212 ~~~~~~~~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivV  291 (523)
                      ........++.|.|.|++...+.+|+|.||||++||..++|+.....+.++-.+.+..+..           ...+|++|
T Consensus       955 ~~~~~~~~~t~r~f~i~n~~~~~~r~v~qfq~~~WP~~~~~p~~~~~~~~i~~~~~~~q~~-----------~~~~P~~V 1023 (1087)
T KOG4228|consen  955 MNEHINPQYTAREFGVTNEREKQSRTVRQFQFTGWPEYGKPPQSKGPISKIPSVASKWQQL-----------GADGPIIV 1023 (1087)
T ss_pred             cccccchhhhhhhheeeeccccCceEEEEEEecCCcccCcCCCCcchhhhHHHHHHHHHhh-----------cCCCCEEE
Confidence            9999999999999999998888999999999999999999877766666655554443321           12679999


Q ss_pred             EcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHH
Q psy15394        292 HCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL  354 (523)
Q Consensus       292 HCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~  354 (523)
                      ||++|+||||+||||.+++++++.++.|||+++|+.||.+|++||++.+||.|||+++++|+.
T Consensus      1024 hc~nG~~rsg~f~ai~~l~e~~~~e~~vDVfq~vk~Lr~~rp~mv~t~~QY~fcYdv~~~y~~ 1086 (1087)
T KOG4228|consen 1024 HCLNGVGRTGTFCAISILLERMRKEGVVDVFQTVKTLRFQRPGMVDTSDQYQFCYDVALEYLG 1086 (1087)
T ss_pred             EEcCCCcceeehHHHHHHHHHHhhcCceeeehhhhhhhhcCccccCcHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999999999999999999963


No 16 
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=100.00  E-value=1.7e-52  Score=432.01  Aligned_cols=223  Identities=15%  Similarity=0.242  Sum_probs=187.5

Q ss_pred             CCCCCCCCCeeeecCCCCCCCCCceeeeccCCcccccceeecCCCCC--CCHHHHHHHHHhcCCcEEEEcCCcccCCccc
Q psy15394        112 SDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQ--NTVEDFWRMVWEQQTLVIIMTTRVIERGRNK  189 (523)
Q Consensus       112 ~~i~p~D~sRV~L~~~~~~~~sdYINAs~I~g~~~~~~yIatQ~Pl~--~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~k  189 (523)
                      .+|+|+|||||+|+.      ++|||||||+ +..++.+|++|.|+.  +|++|||+||||++|.+|||||+..|.++.+
T Consensus       305 ~~I~~~~~TrV~ls~------g~yI~ANyI~-~~~k~~aIa~QYP~nt~eTieDFWrMVWEn~~~VIVMLT~l~E~g~~K  377 (535)
T PRK15375        305 SSIPINQQTQVKLSD------GMPVPVNTLT-FDGKPVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTSEDQMQAKQ  377 (535)
T ss_pred             cccCccccceEEcCC------CCccccceee-ecCccceEeccCCCCchhhHHHHHHHHHHcCCCEEEEeeccccCcccc
Confidence            599999999999953      6899999999 888889999999976  8999999999999999999999999999999


Q ss_pred             cccccCCCCCCeeEecceeEEEeEEEeC-CCceEEEeeeeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHH
Q psy15394        190 CAQYWPGTEGTKMTHGDFLVTTECVTSS-PDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHT  268 (523)
Q Consensus       190 c~~YwP~~~~~~~~~g~~~V~~~~~~~~-~~~~~r~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~  268 (523)
                      |.+||+    ++..||+|+|++.+++.. .+++++.+.+........+.|.||||++|||||+|+++..++.|++.|+..
T Consensus       378 C~pYW~----~s~tYGdItVts~seesls~g~iIR~f~L~Ik~~E~R~tV~QFHyTnWPDHGVPpST~~LleLvr~Vr~~  453 (535)
T PRK15375        378 LPPYFR----GSYTFGEVHTNSQKVSSASQGEAIDQYNMQLSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNS  453 (535)
T ss_pred             cCccCC----CcceeccEEEEEEEEEeccCCceEEEEEEEEecCCceeEEEEEEeCCCCCCCCCCChHHHHHHHHHHHHh
Confidence            999996    357899999999888765 568888776654444445589999999999999999888899999999876


Q ss_pred             HHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhcccc-CccChhHHHHHHH
Q psy15394        269 QAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH-SIQMRDQYIFCHL  347 (523)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~-~Vqt~~QY~Fiy~  347 (523)
                      +....    ......+..+| |||||||+||||||||++.+    .....+||.++|+.||.+|++ |||+.+||.|++.
T Consensus       454 ~q~~~----~~~~~~nk~~P-VVHCSAGVGRTGTFIAi~ll----k~~~~~sle~IV~dlR~qRng~MVQt~eQy~~l~~  524 (535)
T PRK15375        454 NQNGA----PGRSSSDKHLP-MIHCLGGVGRTGTMAAALVL----KDNPHSNLEQVRADFRNSRNNRMLEDASQFVQLKA  524 (535)
T ss_pred             hhccc----ccccccCCCCc-eEEcCCCCchHHHHHHHHHH----hccccCCHHHHHHHHHhcCCccccccHHHHHHHHH
Confidence            43100    00000112345 89999999999999999873    444679999999999999999 9999999999999


Q ss_pred             HHHHHHH
Q psy15394        348 ALIEYAL  354 (523)
Q Consensus       348 alle~~~  354 (523)
                      .-...+.
T Consensus       525 ~~~~~~~  531 (535)
T PRK15375        525 MQAQLLM  531 (535)
T ss_pred             HHHHHhh
Confidence            8877654


No 17 
>KOG0789|consensus
Probab=100.00  E-value=1.3e-50  Score=429.73  Aligned_cols=276  Identities=30%  Similarity=0.458  Sum_probs=215.0

Q ss_pred             HHHHHHHHhcChhhHHHHHhhcccCCCCcchhhhccccccCCCCCCCCCCCCCCeeeecCCCCCCCCCceeeeccCCccc
Q psy15394         67 AEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQ  146 (523)
Q Consensus        67 ~~~~~~~~~~~~~~~~~Ef~~l~~~~~~~~~~~a~~~~N~~KNRy~~i~p~D~sRV~L~~~~~~~~sdYINAs~I~g~~~  146 (523)
                      ..|++........++..+|.......... ........|..||||.||.|||++||+|....   ..||||||||+++..
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~kNr~~dv~~~d~~rV~l~~~~---~~dyI~A~~v~~~~~  165 (415)
T KOG0789|consen   90 IDWVQSLLYSLIVEMFKQFRSNKVEKESS-HLCDAFLKNMDKNRYSDVQCLDHTRVKLKPPQ---DKDYIHASKIYFPKG  165 (415)
T ss_pred             HHHHHhhhccccHHHHHHHHHhhccCCcc-hhhhhhhccccccccCCcCcccCCeeecCCCC---CcccchhhccCCcCC
Confidence            34444444344556666666654332221 13556678889999999999999999997653   579999999999763


Q ss_pred             ccceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeE---EEeC---CCc
Q psy15394        147 KNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTEC---VTSS---PDY  220 (523)
Q Consensus       147 ~~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~---~~~~---~~~  220 (523)
                      .+.||+||||+++|..|||+|||++++..|||||+..|.|+.+|.+|||.+.|....||.+..++..   ....   ..+
T Consensus       166 ~~~~I~tQ~Pl~~t~~dFW~mv~~~k~~~Ivml~~~~E~~~~kc~~Y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (415)
T KOG0789|consen  166 PRTAILTQAPLSKTTEDFWRMVFEEKVESVVLLCSDEELGAAECASYFPSKRGVKLTFLEFGKKFVENRKVEMKQQDQTS  245 (415)
T ss_pred             CcCceecCCCCcccHHHHHHHHHHcCCCEEEEecchhhccHHHHhhcCcccCCCeeeecccceeEEEeeeeecccccccc
Confidence            3899999999999999999999999999999999999999999999999987666778777544333   2222   233


Q ss_pred             eEEEee-eeccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCch
Q psy15394        221 VLSSLT-LCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGR  299 (523)
Q Consensus       221 ~~r~l~-l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGR  299 (523)
                      ....+. ....+...++.|.||||++|||+|+|.+...++.+++. ....            ..+..+|++||||+|+||
T Consensus       246 ~~~~~~~~~~~~~~~~~~v~~~~~~~WPd~~~p~~~~~~l~~~~~-~~~~------------~~~~~~P~vVhcsaG~gR  312 (415)
T KOG0789|consen  246 TVGLLLLVLPEGLEISSSVVHYHYINWPDHGAPDSVKSILPLLRQ-SVLE------------LRPKQEPIEVHCSAGAGR  312 (415)
T ss_pred             eeeEEEeecCCCccccceEEEEeeCCCccccCCcchHHHHHHHHh-hhhh------------hcCCCCCeEEECCCCCCc
Confidence            333322 22233344579999999999999999999999999886 1111            123467999999999999


Q ss_pred             hhHHHHHHHHHHhccC-CCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHHcCCC
Q psy15394        300 TGTLCTLDICISRLED-SGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLI  359 (523)
Q Consensus       300 TGtfiaid~~l~~l~~-~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~~~~~  359 (523)
                      ||||+++++++.++.. ....++..++..+|.||+++|||..||.|+|.++++|+......
T Consensus       313 tgt~v~~~~~~~~~~~~~~~~~~~~~~~~iR~qR~~~vqt~~Qy~f~~~~~~~~~~~~~~~  373 (415)
T KOG0789|consen  313 AGTLVLIEHALIELQGPEGEPPIDEILREIRYQRPGAVQSPLQYLFIYAATLKYIKKVSYW  373 (415)
T ss_pred             cchHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHccCC
Confidence            9999999988888754 45678999999999999999999999999999999999974443


No 18 
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or  "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=99.90  E-value=2.5e-23  Score=177.07  Aligned_cols=104  Identities=47%  Similarity=0.796  Sum_probs=94.5

Q ss_pred             EEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCC
Q psy15394        237 MVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS  316 (523)
Q Consensus       237 ~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~  316 (523)
                      .+.||||.+|||+++|.....+++|+..++.....           .+.++||+|||++|+||||+||++++++.++..+
T Consensus         1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~-----------~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~   69 (105)
T smart00012        1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQ-----------SSSSGPVVVHCSAGVGRTGTFVALDILLQQLESE   69 (105)
T ss_pred             CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHh-----------cCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhc
Confidence            37899999999999999999999999999987542           1135799999999999999999999999999887


Q ss_pred             -CccCHHHHHHHHHhccccCccChhHHHHHHHHHHH
Q psy15394        317 -GTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE  351 (523)
Q Consensus       317 -~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle  351 (523)
                       +.+++.++++.+|.+|++++++.+||.|+|.++++
T Consensus        70 ~~~~~~~~~~~~ir~~r~~~~~~~~q~~~~~~~~~~  105 (105)
T smart00012       70 TGEVDIFQTVKELRKQRPGMVQTFEQYLFLYRALLE  105 (105)
T ss_pred             CCCCCHHHHHHHHHhhhhhhCCcHHHHHHHHHHHhC
Confidence             79999999999999999999999999999999874


No 19 
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=99.90  E-value=2.5e-23  Score=177.07  Aligned_cols=104  Identities=47%  Similarity=0.796  Sum_probs=94.5

Q ss_pred             EEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCC
Q psy15394        237 MVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS  316 (523)
Q Consensus       237 ~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~  316 (523)
                      .+.||||.+|||+++|.....+++|+..++.....           .+.++||+|||++|+||||+||++++++.++..+
T Consensus         1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~-----------~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~   69 (105)
T smart00404        1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQ-----------SSSSGPVVVHCSAGVGRTGTFVALDILLQQLESE   69 (105)
T ss_pred             CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHh-----------cCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhc
Confidence            37899999999999999999999999999987542           1135799999999999999999999999999887


Q ss_pred             -CccCHHHHHHHHHhccccCccChhHHHHHHHHHHH
Q psy15394        317 -GTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE  351 (523)
Q Consensus       317 -~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle  351 (523)
                       +.+++.++++.+|.+|++++++.+||.|+|.++++
T Consensus        70 ~~~~~~~~~~~~ir~~r~~~~~~~~q~~~~~~~~~~  105 (105)
T smart00404       70 TGEVDIFQTVKELRKQRPGMVQTFEQYLFLYRALLE  105 (105)
T ss_pred             CCCCCHHHHHHHHHhhhhhhCCcHHHHHHHHHHHhC
Confidence             79999999999999999999999999999999874


No 20 
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=99.87  E-value=2.2e-22  Score=203.25  Aligned_cols=98  Identities=21%  Similarity=0.541  Sum_probs=82.8

Q ss_pred             CchhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccc
Q psy15394        401 AALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRA  480 (523)
Q Consensus       401 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~  480 (523)
                      .+..||+|+..++..+..+.....     ....+|||||||+|+||||+|||+|+++++++.++.|||+++|++||.||+
T Consensus       194 ~~~~~l~fi~~V~~~~~~~~~~~~-----~~~~~PIVVHCSaGvGRTGtFcaiDi~l~~~~~~~~vdi~~~V~~lR~qR~  268 (298)
T PHA02740        194 DPDAFIDFFCNIDDLCADLEKHKA-----DGKIAPIIIDCIDGISSSAVFCVFDICATEFDKTGMLSIANALKKVRQKKY  268 (298)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhc-----cCCCCCEEEECCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHHHHHhhCc
Confidence            466899999888754433221111     123579999999999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHc
Q psy15394        481 HSIQMRDQYIFCHLALIEYALSR  503 (523)
Q Consensus       481 ~~v~t~~Qy~f~~~~i~~~~~~~  503 (523)
                      +|||+.+||.|||++|++|+...
T Consensus       269 ~~Vqt~~QY~F~y~~l~~yl~~~  291 (298)
T PHA02740        269 GCMNCLDDYVFCYHLIAAYLKEK  291 (298)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999998653


No 21 
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=99.84  E-value=4.4e-21  Score=194.84  Aligned_cols=101  Identities=30%  Similarity=0.613  Sum_probs=82.2

Q ss_pred             CchhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccc
Q psy15394        401 AALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRA  480 (523)
Q Consensus       401 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~  480 (523)
                      +.-.||+|+..++..+....  ...........+|||||||+|+||||+|||+|++++++..++.|||+++|++||+||+
T Consensus       199 ~~~~~l~~i~~v~~~~~~~~--~~~~~~~~~~~~PIvVHCsaGvGRTGtF~aid~~i~~~~~~~~v~v~~~V~~lR~qR~  276 (303)
T PHA02742        199 DPNKFLDFVLAVREADLKAD--VDIKGENIVKEPPILVHCSAGLDRAGAFCAIDICISKYNERAIIPLLSIVRDLRKQRH  276 (303)
T ss_pred             CHHHHHHHHHHHHHHhhhcc--ccccccccCCCCCeEEECCCCCchhHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhcc
Confidence            45678888888775332110  0000001123579999999999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHc
Q psy15394        481 HSIQMRDQYIFCHLALIEYALSR  503 (523)
Q Consensus       481 ~~v~t~~Qy~f~~~~i~~~~~~~  503 (523)
                      +||||.+||.|||++|++|+...
T Consensus       277 ~~Vqt~~QY~F~y~~l~~y~~~~  299 (303)
T PHA02742        277 NCLSLPQQYIFCYFIVLIFAKLM  299 (303)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999764


No 22 
>PHA02738 hypothetical protein; Provisional
Probab=99.84  E-value=6.7e-21  Score=194.71  Aligned_cols=101  Identities=36%  Similarity=0.573  Sum_probs=83.7

Q ss_pred             CchhhhhhHHHHHHhhhhhhhhc-cccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhcc
Q psy15394        401 AALSMLEFLAKARYTQASLLADL-GDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQR  479 (523)
Q Consensus       401 ~~i~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR  479 (523)
                      ..-.||+|+..++..+..+.... ..++. ....+|||||||+|+||||+|||+|+++++++.++.|||+++|++||.||
T Consensus       195 ~~~~~l~fi~~V~~~~~~~~~~~~~~~~~-~~~~~PIVVHCs~GiGRtGtFcaidi~i~~~~~~~~vdv~~~V~~lR~qR  273 (320)
T PHA02738        195 NTSEFLNFVLEVRQCQKELAQESLQIGHN-RLQPPPIVVHCNAGLGRTPCYCVVDISISRFDACATVSIPSIVSSIRNQR  273 (320)
T ss_pred             CHHHHHHHHHHHHHHHHHhhhhhcccCcc-ccCCCCeEEEcCCCCChhhhhhHHHHHHHHHHhcCCcCHHHHHHHHHhhh
Confidence            45678999988886554432211 11111 11347999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHHH
Q psy15394        480 AHSIQMRDQYIFCHLALIEYALS  502 (523)
Q Consensus       480 ~~~v~t~~Qy~f~~~~i~~~~~~  502 (523)
                      +++|+|.+||.|||++|++|+..
T Consensus       274 ~~~vqt~~QY~F~y~~l~~y~~~  296 (320)
T PHA02738        274 YYSLFIPFQYFFCYRAVKRYVNL  296 (320)
T ss_pred             hhccCCHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999864


No 23 
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=99.83  E-value=1.3e-20  Score=192.89  Aligned_cols=100  Identities=36%  Similarity=0.582  Sum_probs=83.8

Q ss_pred             CchhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccc
Q psy15394        401 AALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRA  480 (523)
Q Consensus       401 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~  480 (523)
                      +...||+|+..++..+..+......   ..+..+|||||||+|+||||+|||+|+++++++.++.|||+++|++||.||+
T Consensus       218 ~~~~~l~~i~~v~~~~~~~~~~~~~---~~~~~~PIvVHCsaGvGRTGtfcaid~~l~~l~~~~~vdv~~~V~~lR~qR~  294 (323)
T PHA02746        218 GMAEFLELINKVNEEQAELIKQADN---DPQTLGPIVVHCSAGIGRAGTFCAIDNALEQLEKEKEVCLGEIVLKIRKQRH  294 (323)
T ss_pred             CHHHHHHHHHHHHHHHHHHhhhhcc---CCCCCCCEEEEcCCCCCcchhHHHHHHHHHHHHhcCCCCHHHHHHHHHhccc
Confidence            4568899998887655443222111   1123579999999999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHc
Q psy15394        481 HSIQMRDQYIFCHLALIEYALSR  503 (523)
Q Consensus       481 ~~v~t~~Qy~f~~~~i~~~~~~~  503 (523)
                      +||||.+||.|||++|.+|+...
T Consensus       295 ~~Vqt~~QY~F~y~~l~~~l~~~  317 (323)
T PHA02746        295 SSVFLPEQYAFCYKALKYAIIEE  317 (323)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999998654


No 24 
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=99.81  E-value=6.5e-20  Score=186.92  Aligned_cols=98  Identities=27%  Similarity=0.469  Sum_probs=79.2

Q ss_pred             chhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhcccc
Q psy15394        402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH  481 (523)
Q Consensus       402 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~  481 (523)
                      ...||+|+..++..+........   +..+..+|||||||+|+||||+|||+|++++++..++.+||+++|++||.||++
T Consensus       201 ~~~~l~fi~~v~~~~~~~~~~~~---~~~~~~~PIvVHCsaGvGRtGtfcaidi~i~~l~~~~~v~v~~~V~~lR~qR~~  277 (312)
T PHA02747        201 HPDFIKFIKIIDINRKKSGKLFN---PKDALLCPIVVHCSDGVGKTGIFCAVDICLNQLVKRKAICLAKTAEKIREQRHA  277 (312)
T ss_pred             hHHHHHHHHHHHHHHHHhhcccc---ccccCCCCEEEEecCCCcchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHhcccc
Confidence            45677777766544332211110   111234799999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHH---HHHHHHHHHH
Q psy15394        482 SIQMRDQYIFC---HLALIEYALS  502 (523)
Q Consensus       482 ~v~t~~Qy~f~---~~~i~~~~~~  502 (523)
                      ||+|.+||.||   |++|.+|+..
T Consensus       278 ~Vqt~~QY~F~~~~Y~~l~~~~~~  301 (312)
T PHA02747        278 GIMNFDDYLFIQPGYEVLHYFLSK  301 (312)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999   9999988853


No 25 
>KOG0790|consensus
Probab=99.79  E-value=8.5e-20  Score=183.82  Aligned_cols=91  Identities=37%  Similarity=0.653  Sum_probs=79.3

Q ss_pred             CchhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcC---CCCHHHHHHHHHh
Q psy15394        401 AALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG---TVDVRGTVKRIRS  477 (523)
Q Consensus       401 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~---~v~v~~~v~~lR~  477 (523)
                      ..-.+|+||..++..+..+           ...||||||||||+||||+|++||++|+++++.+   .|||..+|+.+|.
T Consensus       430 dPg~vLnFLe~V~~rq~~l-----------~~AgpIvVHCSAGIGrTGTfiViD~lld~I~~~Gldc~iDi~ktIqmVRs  498 (600)
T KOG0790|consen  430 DPGGVLNFLEEVNHRQESL-----------MDAGPIVVHCSAGIGRTGTFIVIDMLLDQIREKGLDCDIDIQKTIQMVRS  498 (600)
T ss_pred             CccHHHHHHHHhhhhhccc-----------cccCcEEEEccCCcCCcceEEEhHHHHHHHHhcCCCCcccHHHHHHHHHH
Confidence            3456788888777554332           2357999999999999999999999999999987   6999999999999


Q ss_pred             ccccCCCCHHHHHHHHHHHHHHHHH
Q psy15394        478 QRAHSIQMRDQYIFCHLALIEYALS  502 (523)
Q Consensus       478 qR~~~v~t~~Qy~f~~~~i~~~~~~  502 (523)
                      ||.|||||..||.|+|.||..||+.
T Consensus       499 qRSGmVQTEaQYkFiY~Avqhyiet  523 (600)
T KOG0790|consen  499 QRSGMVQTEAQYKFIYVAVQHYIET  523 (600)
T ss_pred             HhcchhhhHHhHHHHHHHHHHHHHH
Confidence            9999999999999999999999963


No 26 
>KOG0792|consensus
Probab=99.74  E-value=4.2e-18  Score=187.26  Aligned_cols=94  Identities=36%  Similarity=0.583  Sum_probs=82.4

Q ss_pred             hhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccC
Q psy15394        403 LSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHS  482 (523)
Q Consensus       403 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~  482 (523)
                      -.||+|+..+|-.++             ..++|||||||+|+|||||++.+|+++..++++..|||.++|+.||.||.+|
T Consensus      1046 ~~FL~FleevrsvR~-------------~t~pPilvHCSAGiGRTGVlIl~e~~l~lle~Ne~vdi~divr~mR~QR~~m 1112 (1144)
T KOG0792|consen 1046 NDFLDFLEEVRSVRR-------------GTNPPILVHCSAGIGRTGVLILMETALCLLEHNEPVDILDIVRTMRDQRAMM 1112 (1144)
T ss_pred             HHHHHHHHHHHHHhc-------------cCCCCeEEEccCCCCcceehHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhh
Confidence            456666666654332             1256999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHcCCCCCC
Q psy15394        483 IQMRDQYIFCHLALIEYALSRGLISAK  509 (523)
Q Consensus       483 v~t~~Qy~f~~~~i~~~~~~~~~~~~~  509 (523)
                      |||..||.|||++|+.++++..+|+.-
T Consensus      1113 VQT~~QYkFVyevil~~l~~~~l~~~~ 1139 (1144)
T KOG0792|consen 1113 VQTLSQYKFVYEVILRVLKRGRLIPLA 1139 (1144)
T ss_pred             ccchHHhhHHHHHHHHHHHhccccccc
Confidence            999999999999999999998887653


No 27 
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=99.69  E-value=1e-17  Score=159.81  Aligned_cols=71  Identities=45%  Similarity=0.643  Sum_probs=62.9

Q ss_pred             CCCCeEEecCCCCCccchhhHHHHHHHHHhhc--------CCCC-HHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHH
Q psy15394        432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDS--------GTVD-VRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS  502 (523)
Q Consensus       432 ~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~--------~~v~-v~~~v~~lR~qR~~~v~t~~Qy~f~~~~i~~~~~~  502 (523)
                      +.+|++||||||+||||||+|+|.++......        ...| |+++|..||+||+.|||+..||.|||++++++.++
T Consensus       217 ~t~piiVHCSAGvGRTGTFIalD~ll~~~~~~~~~t~~~~~t~D~if~iV~~LRsQRmkmVQn~~Qf~flY~~~~~l~~~  296 (302)
T COG5599         217 RTGPIIVHCSAGVGRTGTFIALDILLRMPNDTLNHTDTWEDTQDLIFQIVLSLRSQRMKMVQNKTQFKFLYDAFLELNKS  296 (302)
T ss_pred             CCCCEEEEeccCCCCcceeeeHHHHHhccccccCCCchhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            56899999999999999999999999877644        2223 89999999999999999999999999999998743


No 28 
>KOG0791|consensus
Probab=99.67  E-value=1.3e-16  Score=159.19  Aligned_cols=92  Identities=37%  Similarity=0.623  Sum_probs=80.2

Q ss_pred             cCchhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhcc
Q psy15394        400 AAALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQR  479 (523)
Q Consensus       400 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR  479 (523)
                      .++-..+.|+..++..            ... ..+|++||||+|+||||||+|+|.++.++..+..+|++.+|..||.+|
T Consensus       267 ~~~~sl~~f~~~~r~~------------~~~-~~~p~iVhCSAGVgRTGTFiald~LLqq~~~~~~vdi~~iv~~lR~~R  333 (374)
T KOG0791|consen  267 SSTESLLQFVRMVRQS------------LDT-SKGPTIVHCSAGVGRTGTFIALDRLLQQIDSEETVDIFGVVLELRSAR  333 (374)
T ss_pred             CCchhHHHHHHHHHhh------------ccc-CCCceeEEeecccccccchHhHHHHHHHhcccccccHHHHHHHhhhcc
Confidence            4566778888777632            111 257999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHHHcC
Q psy15394        480 AHSIQMRDQYIFCHLALIEYALSRG  504 (523)
Q Consensus       480 ~~~v~t~~Qy~f~~~~i~~~~~~~~  504 (523)
                      +.||||.+||.|+|+++++-+..+.
T Consensus       334 ~~mVqte~Qyvfl~~c~~~~l~~~~  358 (374)
T KOG0791|consen  334 MLMVQTEDQYVFLHQCVLESLQGKK  358 (374)
T ss_pred             ccccchHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999886553


No 29 
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=99.66  E-value=1.7e-16  Score=157.99  Aligned_cols=83  Identities=42%  Similarity=0.695  Sum_probs=73.3

Q ss_pred             chhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhcccc
Q psy15394        402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH  481 (523)
Q Consensus       402 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~  481 (523)
                      ...+++|+..++....             ...+||+|||++|+||||+||+++++++++..++.+|++++++.||.||++
T Consensus       175 ~~~~~~~i~~v~~~~~-------------~~~~pivVHC~~G~gRsg~f~a~~~~~~~l~~~~~v~v~~~v~~lR~~R~~  241 (258)
T smart00194      175 PKSILDLVRAVRKSQS-------------TSTGPIVVHCSAGVGRTGTFIAIDILLQQLEAGKEVDIFEIVKELRSQRPG  241 (258)
T ss_pred             HHHHHHHHHHHHHhhc-------------cCCCCEEEEeCCCCCccchhhHHHHHHHHHHHcCCCCHHHHHHHHHhcccc
Confidence            4567888877763321             114799999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHH
Q psy15394        482 SIQMRDQYIFCHLALI  497 (523)
Q Consensus       482 ~v~t~~Qy~f~~~~i~  497 (523)
                      +|++.+||.|||.+++
T Consensus       242 ~v~~~~Qy~f~~~~l~  257 (258)
T smart00194      242 MVQTEEQYIFLYRAIL  257 (258)
T ss_pred             ccCCHHHHHHHHHHHh
Confidence            9999999999999986


No 30 
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=99.63  E-value=7.2e-16  Score=150.88  Aligned_cols=84  Identities=50%  Similarity=0.799  Sum_probs=73.1

Q ss_pred             hhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccC
Q psy15394        403 LSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHS  482 (523)
Q Consensus       403 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~  482 (523)
                      -.++.|+..++.....            ...+||+|||++|+||||+|||++++++++..++.+|+.++++.||+||+++
T Consensus       148 ~~~~~~~~~v~~~~~~------------~~~~pivVHC~~G~gRsg~~~a~~~~~~~~~~~~~~~~~~~v~~iR~~R~~~  215 (231)
T cd00047         148 DSLLDLLRKVRKSQQQ------------PGSGPIVVHCSAGVGRTGTFIAIDILLQRLEAEGVVDIFQTVKELRSQRPGM  215 (231)
T ss_pred             HHHHHHHHHHHHHhcc------------CCCCCeEEECCCCCCccchHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccc
Confidence            4677777776633211            2356999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHH
Q psy15394        483 IQMRDQYIFCHLALIE  498 (523)
Q Consensus       483 v~t~~Qy~f~~~~i~~  498 (523)
                      |++.+||.|||.++++
T Consensus       216 v~~~~Qy~f~~~~l~~  231 (231)
T cd00047         216 VQTEEQYIFLYRAILE  231 (231)
T ss_pred             cCCHHHHHHHHHHHhC
Confidence            9999999999999863


No 31 
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=99.63  E-value=1e-15  Score=129.95  Aligned_cols=84  Identities=44%  Similarity=0.710  Sum_probs=72.2

Q ss_pred             hhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhc-CCCCHHHHHHHHHhcccc
Q psy15394        403 LSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS-GTVDVRGTVKRIRSQRAH  481 (523)
Q Consensus       403 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~-~~v~v~~~v~~lR~qR~~  481 (523)
                      ..+++|+..++.....           .+..+||+|||++|+||||+||++++++.++..+ ..+++.++++.+|.+|++
T Consensus        20 ~~~~~~~~~v~~~~~~-----------~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~r~~   88 (105)
T smart00404       20 DSILEFLRAVKKNLNQ-----------SSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTVKELRKQRPG   88 (105)
T ss_pred             HHHHHHHHHHHHHHHh-----------cCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhh
Confidence            5677777766643221           1235799999999999999999999999999888 799999999999999999


Q ss_pred             CCCCHHHHHHHHHHHH
Q psy15394        482 SIQMRDQYIFCHLALI  497 (523)
Q Consensus       482 ~v~t~~Qy~f~~~~i~  497 (523)
                      ++++.+||.|+|.+++
T Consensus        89 ~~~~~~q~~~~~~~~~  104 (105)
T smart00404       89 MVQTFEQYLFLYRALL  104 (105)
T ss_pred             hCCcHHHHHHHHHHHh
Confidence            9999999999999986


No 32 
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or  "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=99.63  E-value=1e-15  Score=129.95  Aligned_cols=84  Identities=44%  Similarity=0.710  Sum_probs=72.2

Q ss_pred             hhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhc-CCCCHHHHHHHHHhcccc
Q psy15394        403 LSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS-GTVDVRGTVKRIRSQRAH  481 (523)
Q Consensus       403 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~-~~v~v~~~v~~lR~qR~~  481 (523)
                      ..+++|+..++.....           .+..+||+|||++|+||||+||++++++.++..+ ..+++.++++.+|.+|++
T Consensus        20 ~~~~~~~~~v~~~~~~-----------~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~r~~   88 (105)
T smart00012       20 DSILEFLRAVKKNLNQ-----------SSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTVKELRKQRPG   88 (105)
T ss_pred             HHHHHHHHHHHHHHHh-----------cCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhh
Confidence            5677777766643221           1235799999999999999999999999999888 799999999999999999


Q ss_pred             CCCCHHHHHHHHHHHH
Q psy15394        482 SIQMRDQYIFCHLALI  497 (523)
Q Consensus       482 ~v~t~~Qy~f~~~~i~  497 (523)
                      ++++.+||.|+|.+++
T Consensus        89 ~~~~~~q~~~~~~~~~  104 (105)
T smart00012       89 MVQTFEQYLFLYRALL  104 (105)
T ss_pred             hCCcHHHHHHHHHHHh
Confidence            9999999999999986


No 33 
>PF00102 Y_phosphatase:  Protein-tyrosine phosphatase;  InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []:   (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases   Based on their cellular localisation, PTPases are also classified as:   Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases []   All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits.  This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=99.61  E-value=1e-15  Score=149.33  Aligned_cols=84  Identities=44%  Similarity=0.820  Sum_probs=74.4

Q ss_pred             chhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhcccc
Q psy15394        402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH  481 (523)
Q Consensus       402 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~  481 (523)
                      ...++.++..++...             ....+||+|||++|+||||+||+++++++++..++.+|+.++++.||+||++
T Consensus       152 ~~~~~~~~~~v~~~~-------------~~~~~pivVhc~~G~gRsg~f~~~~~~~~~~~~~~~~~v~~~~~~lR~~R~~  218 (235)
T PF00102_consen  152 PESFLDFIRKVNKSK-------------DDPNGPIVVHCSDGVGRSGTFCAIDILIEQLKKEGEVDVFEIVKKLRQQRPG  218 (235)
T ss_dssp             SHHHHHHHHHHHHHH-------------STTSSEEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTT
T ss_pred             cchhhhhhhhccccc-------------cCCccceEeecccccccccccccchhhccccccccchhhHHHHHHHHhhCCC
Confidence            556777777666332             1245799999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHH
Q psy15394        482 SIQMRDQYIFCHLALIE  498 (523)
Q Consensus       482 ~v~t~~Qy~f~~~~i~~  498 (523)
                      +|++.+||.|||.+++|
T Consensus       219 ~i~~~~qy~f~~~~~~e  235 (235)
T PF00102_consen  219 AIQSPEQYRFCYMAVLE  235 (235)
T ss_dssp             SSSSHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhC
Confidence            99999999999999986


No 34 
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=99.61  E-value=5.2e-15  Score=137.19  Aligned_cols=138  Identities=17%  Similarity=0.225  Sum_probs=99.3

Q ss_pred             cceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEeCCCceEEEeee
Q psy15394        148 NAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTL  227 (523)
Q Consensus       148 ~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~l  227 (523)
                      .+||++-+|++.++.+|....-++++..||.+|..          +|+.+                              
T Consensus        16 ~r~~~~~~P~~~~~~~~l~~L~~~gI~~Iv~l~~~----------~~~~~------------------------------   55 (166)
T PTZ00242         16 FKFLILDAPSPSNLPLYIKELQRYNVTHLVRVCGP----------TYDAE------------------------------   55 (166)
T ss_pred             eEEEEecCCCcccHHHHHHHHHhCCCeEEEecCCC----------CCCHH------------------------------
Confidence            47999999999999999999999999999988641          22211                              


Q ss_pred             eccCCCceeEEEEEEEeeec--cCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHH
Q psy15394        228 CNTKTLETRMVAHYQFTAWL--DYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCT  305 (523)
Q Consensus       228 ~~~~~~~~r~V~h~~y~~Wp--d~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfia  305 (523)
                             .....+++|..||  |+++| +...+..|++.+.......          ...++||+|||.+|+||||+||+
T Consensus        56 -------~~~~~gi~~~~~p~~D~~~P-~~~~i~~~~~~i~~~~~~~----------~~~g~~V~VHC~aGigRSgt~~a  117 (166)
T PTZ00242         56 -------LLEKNGIEVHDWPFDDGAPP-PKAVIDNWLRLLDQEFAKQ----------STPPETIAVHCVAGLGRAPILVA  117 (166)
T ss_pred             -------HHHHCCCEEEecCCCCCCCC-CHHHHHHHHHHHHHHHHhh----------ccCCCeEEEECCCCCCHHHHHHH
Confidence                   0112234555566  66655 4544444444444332110          12467999999999999999999


Q ss_pred             HHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHH
Q psy15394        306 LDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL  349 (523)
Q Consensus       306 id~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~al  349 (523)
                      ++.+.     .+.+++.+++..+|++|++++ +..|+.|+.+..
T Consensus       118 ~yL~~-----~~~~s~~eAi~~vr~~R~~~i-~~~Q~~~l~~~~  155 (166)
T PTZ00242        118 LALVE-----YGGMEPLDAVGFVREKRKGAI-NQTQLQFLKKYK  155 (166)
T ss_pred             HHHHH-----hCCCCHHHHHHHHHHHCCCCc-hHHHHHHHHHHH
Confidence            97432     235799999999999999999 589999997655


No 35 
>KOG0793|consensus
Probab=99.57  E-value=3.1e-15  Score=157.82  Aligned_cols=87  Identities=37%  Similarity=0.626  Sum_probs=75.6

Q ss_pred             CchhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhc-CCCCHHHHHHHHHhcc
Q psy15394        401 AALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS-GTVDVRGTVKRIRSQR  479 (523)
Q Consensus       401 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~-~~v~v~~~v~~lR~qR  479 (523)
                      ++-.+|+|.++|+...+           +  +.+||+||||+|.|||||+|+||+++++|.+. ..|||..|+..||.||
T Consensus       908 sarslLdFRRKVNK~YR-----------G--RScpIiVH~sdGaGRTG~YiliDmvl~Rm~kGakeIDIaATlEHlRDQR  974 (1004)
T KOG0793|consen  908 SARSLLDFRRKVNKCYR-----------G--RSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGAKEIDIAATLEHLRDQR  974 (1004)
T ss_pred             chHHHHHHHHHhhhhcc-----------C--CCCceEEEccCCCCccceeeeHHHHHHHHhccchhhhHHHHHHHHhhcC
Confidence            45677777777774332           2  46799999999999999999999999999876 5899999999999999


Q ss_pred             ccCCCCHHHHHHHHHHHHHHH
Q psy15394        480 AHSIQMRDQYIFCHLALIEYA  500 (523)
Q Consensus       480 ~~~v~t~~Qy~f~~~~i~~~~  500 (523)
                      +|||.|.+||.|.+.|+.+=+
T Consensus       975 ~GmVaTkdQFef~l~aVAeEV  995 (1004)
T KOG0793|consen  975 PGMVATKDQFEFALTAVAEEV  995 (1004)
T ss_pred             CcceeehhhhHHHHHHHHHHH
Confidence            999999999999999998754


No 36 
>KOG0789|consensus
Probab=99.43  E-value=2.2e-13  Score=144.78  Aligned_cols=75  Identities=33%  Similarity=0.547  Sum_probs=67.3

Q ss_pred             CCCCeEEecCCCCCccchhhHHHHHHHHHhhc-CCCCHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCC
Q psy15394        432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDS-GTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLI  506 (523)
Q Consensus       432 ~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~-~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~~~i~~~~~~~~~~  506 (523)
                      ..+|++||||+|+||||+|+++++++.++... ...++..+++.+|.||+++||+..||.|+|.++++|+......
T Consensus       298 ~~~P~vVhcsaG~gRtgt~v~~~~~~~~~~~~~~~~~~~~~~~~iR~qR~~~vqt~~Qy~f~~~~~~~~~~~~~~~  373 (415)
T KOG0789|consen  298 KQEPIEVHCSAGAGRAGTLVLIEHALIELQGPEGEPPIDEILREIRYQRPGAVQSPLQYLFIYAATLKYIKKVSYW  373 (415)
T ss_pred             CCCCeEEECCCCCCccchHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHccCC
Confidence            45799999999999999999999888887543 5678999999999999999999999999999999999875444


No 37 
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=99.43  E-value=1.7e-13  Score=143.24  Aligned_cols=92  Identities=15%  Similarity=0.314  Sum_probs=67.3

Q ss_pred             chhhhhhHHHHHHhhhhhhhhccccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhcccc
Q psy15394        402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH  481 (523)
Q Consensus       402 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~  481 (523)
                      +-.++.|++.++..+...    ...-...+..+| |||||+|+||||+|||++.    ++.+..+|+.++|+.||.+|++
T Consensus       440 T~~LleLvr~Vr~~~q~~----~~~~~~~nk~~P-VVHCSAGVGRTGTFIAi~l----lk~~~~~sle~IV~dlR~qRng  510 (535)
T PRK15375        440 TDQLEYLADRVKNSNQNG----APGRSSSDKHLP-MIHCLGGVGRTGTMAAALV----LKDNPHSNLEQVRADFRNSRNN  510 (535)
T ss_pred             hHHHHHHHHHHHHhhhcc----cccccccCCCCc-eEEcCCCCchHHHHHHHHH----HhccccCCHHHHHHHHHhcCCc
Confidence            345777877776432110    000001112345 8999999999999999987    3455789999999999999999


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHH
Q psy15394        482 -SIQMRDQYIFCHLALIEYALS  502 (523)
Q Consensus       482 -~v~t~~Qy~f~~~~i~~~~~~  502 (523)
                       |||+.+||.|++..-...+..
T Consensus       511 ~MVQt~eQy~~l~~~~~~~~~~  532 (535)
T PRK15375        511 RMLEDASQFVQLKAMQAQLLMT  532 (535)
T ss_pred             cccccHHHHHHHHHHHHHHhhh
Confidence             999999999999887776643


No 38 
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=99.42  E-value=1.7e-12  Score=124.73  Aligned_cols=134  Identities=15%  Similarity=0.208  Sum_probs=97.9

Q ss_pred             cceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEeCCCceEEEeee
Q psy15394        148 NAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTL  227 (523)
Q Consensus       148 ~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~l  227 (523)
                      -+||++-+|+..++.+|..-....++..||-+|..          +++.+   .+                         
T Consensus        92 ~rfLi~~~P~~~~~~~yl~eLk~~gV~~lVrlcE~----------~Yd~~---~~-------------------------  133 (241)
T PTZ00393         92 IKILILDAPTNDLLPLYIKEMKNYNVTDLVRTCER----------TYNDG---EI-------------------------  133 (241)
T ss_pred             eeEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCCC----------CCCHH---HH-------------------------
Confidence            48999999999999999999999999999988651          22211   00                         


Q ss_pred             eccCCCceeEEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHH
Q psy15394        228 CNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLD  307 (523)
Q Consensus       228 ~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid  307 (523)
                            +..-+.+++ ..|||+++|. ...+-+|+..+.....              .+++|+|||.+|+||||+++|+.
T Consensus       134 ------~~~GI~~~~-lpipDg~aPs-~~~i~~~l~~i~~~l~--------------~g~~VaVHC~AGlGRTGtl~Aay  191 (241)
T PTZ00393        134 ------TSAGINVHE-LIFPDGDAPT-VDIVSNWLTIVNNVIK--------------NNRAVAVHCVAGLGRAPVLASIV  191 (241)
T ss_pred             ------HHcCCeEEE-eecCCCCCCC-HHHHHHHHHHHHHHHh--------------cCCeEEEECCCCCCHHHHHHHHH
Confidence                  011222333 4689999985 3444455554443211              35689999999999999999886


Q ss_pred             HHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHH
Q psy15394        308 ICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLA  348 (523)
Q Consensus       308 ~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~a  348 (523)
                      ++-      .-++..+++..+|+.|++++ +..|+.|+...
T Consensus       192 LI~------~GmspeeAI~~VR~~RPgAI-n~~Q~~fL~~y  225 (241)
T PTZ00393        192 LIE------FGMDPIDAIVFIRDRRKGAI-NKRQLQFLKAY  225 (241)
T ss_pred             HHH------cCCCHHHHHHHHHHHCCCCC-CHHHHHHHHHH
Confidence            542      13689999999999999999 57899887654


No 39 
>KOG1720|consensus
Probab=99.21  E-value=8.9e-11  Score=109.26  Aligned_cols=94  Identities=23%  Similarity=0.336  Sum_probs=76.2

Q ss_pred             EEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCC
Q psy15394        238 VAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG  317 (523)
Q Consensus       238 V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~  317 (523)
                      +.|+++ -.||.+.| ++..+.+|++.+....+               ++-|.|||-||.|||||+||..++...     
T Consensus       116 i~h~~l-~f~Dg~tP-~~~~v~~fv~i~e~~~~---------------~g~iaVHCkaGlGRTG~liAc~lmy~~-----  173 (225)
T KOG1720|consen  116 IDHHDL-FFADGSTP-TDAIVKEFVKIVENAEK---------------GGKIAVHCKAGLGRTGTLIACYLMYEY-----  173 (225)
T ss_pred             ceeeee-ecCCCCCC-CHHHHHHHHHHHHHHHh---------------cCeEEEEeccCCCchhHHHHHHHHHHh-----
Confidence            344443 36788877 67889999998876532               468999999999999999999887753     


Q ss_pred             ccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHH
Q psy15394        318 TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA  353 (523)
Q Consensus       318 ~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~  353 (523)
                      .+.-.+++..||..|+|||++++|+..+++--.-++
T Consensus       174 g~ta~eaI~~lR~~RpG~V~gpqQ~~l~~~q~~~~~  209 (225)
T KOG1720|consen  174 GMTAGEAIAWLRICRPGAVIGPQQHKLLHKQRDLWL  209 (225)
T ss_pred             CCCHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHh
Confidence            478889999999999999999999998888765443


No 40 
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=99.11  E-value=1.2e-09  Score=97.90  Aligned_cols=88  Identities=17%  Similarity=0.225  Sum_probs=65.9

Q ss_pred             EEEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCC
Q psy15394        237 MVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS  316 (523)
Q Consensus       237 ~V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~  316 (523)
                      ...|+.+.+|++...+.....+++|+.....                 .++||+|||.+|.||||++++...+...    
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~~~i~~~~~-----------------~~~~vlVHC~~G~~Rs~~~~~~~l~~~~----  107 (139)
T cd00127          49 NYLYVPILDLPSQDISKYFDEAVDFIDDARE-----------------KGGKVLVHCLAGVSRSATLVIAYLMKTL----  107 (139)
T ss_pred             eEEEEEceeCCCCChHHHHHHHHHHHHHHHh-----------------cCCcEEEECCCCCchhHHHHHHHHHHHc----
Confidence            4677777788755554444455666654432                 2469999999999999999997766544    


Q ss_pred             CccCHHHHHHHHHhccccCccChhHHHHHH
Q psy15394        317 GTVDVRGTVKRIRSQRAHSIQMRDQYIFCH  346 (523)
Q Consensus       317 ~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy  346 (523)
                       ..++.+++..+|++|+.+..+..+...+.
T Consensus       108 -~~~~~~a~~~vr~~r~~~~~~~~~~~~l~  136 (139)
T cd00127         108 -GLSLREAYEFVKSRRPIISPNAGFMRQLK  136 (139)
T ss_pred             -CCCHHHHHHHHHHHCCccCCCHHHHHHHH
Confidence             57999999999999999888877766543


No 41 
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=98.97  E-value=7.5e-10  Score=102.75  Aligned_cols=59  Identities=29%  Similarity=0.433  Sum_probs=50.7

Q ss_pred             CCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHHHHHH
Q psy15394        432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL  496 (523)
Q Consensus       432 ~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~~~i  496 (523)
                      .++||+|||.+|+||||+||++..+     ..+.+++.++++.+|++|++++ +..|+.|+.+..
T Consensus        97 ~g~~V~VHC~aGigRSgt~~a~yL~-----~~~~~s~~eAi~~vr~~R~~~i-~~~Q~~~l~~~~  155 (166)
T PTZ00242         97 PPETIAVHCVAGLGRAPILVALALV-----EYGGMEPLDAVGFVREKRKGAI-NQTQLQFLKKYK  155 (166)
T ss_pred             CCCeEEEECCCCCCHHHHHHHHHHH-----HhCCCCHHHHHHHHHHHCCCCc-hHHHHHHHHHHH
Confidence            3579999999999999999999743     2346799999999999999998 589999997554


No 42 
>KOG2836|consensus
Probab=98.88  E-value=4.3e-08  Score=84.85  Aligned_cols=131  Identities=21%  Similarity=0.377  Sum_probs=94.6

Q ss_pred             cceeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEeCCCceEEEeee
Q psy15394        148 NAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTL  227 (523)
Q Consensus       148 ~~yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~l  227 (523)
                      -+|++|.-|...|+..|-.-+-.+++.++|-.|...         | -.   ..+.-.+                     
T Consensus        17 MrFLIThnPtnaTln~fieELkKygvttvVRVCe~T---------Y-dt---~~lek~G---------------------   62 (173)
T KOG2836|consen   17 MRFLITHNPTNATLNKFIEELKKYGVTTVVRVCEPT---------Y-DT---TPLEKEG---------------------   62 (173)
T ss_pred             eEEEEecCCCchhHHHHHHHHHhcCCeEEEEecccc---------c-CC---chhhhcC---------------------
Confidence            479999999999999999999999999999887531         1 10   0111111                     


Q ss_pred             eccCCCceeEEEEEEEeeec-cCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHH
Q psy15394        228 CNTKTLETRMVAHYQFTAWL-DYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTL  306 (523)
Q Consensus       228 ~~~~~~~~r~V~h~~y~~Wp-d~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiai  306 (523)
                                   ++..+|| |.|.|+...-+-+.+..+......            .++.-|-|||-||+||+-+++|+
T Consensus        63 -------------I~Vldw~f~dg~ppp~qvv~~w~~l~~~~f~e------------~p~~cvavhcvaglgrapvlval  117 (173)
T KOG2836|consen   63 -------------ITVLDWPFDDGAPPPNQVVDDWLSLVKTKFRE------------EPGCCVAVHCVAGLGRAPVLVAL  117 (173)
T ss_pred             -------------ceEeecccccCCCCchHHHHHHHHHHHHHHhh------------CCCCeEEEEeecccCcchHHHHH
Confidence                         2334798 788887666555666655554331            24567999999999999999998


Q ss_pred             HHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHH
Q psy15394        307 DICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF  344 (523)
Q Consensus       307 d~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~F  344 (523)
                      ..+-.-      ....+.|..+|++|.|++.+ .|..|
T Consensus       118 alie~g------mkyedave~ir~krrga~n~-kql~~  148 (173)
T KOG2836|consen  118 ALIEAG------MKYEDAVEMIRQKRRGAINS-KQLLY  148 (173)
T ss_pred             HHHHcc------ccHHHHHHHHHHHhhccccH-HHHHH
Confidence            765433      46678999999999999865 45544


No 43 
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=98.84  E-value=2.4e-08  Score=94.04  Aligned_cols=90  Identities=21%  Similarity=0.303  Sum_probs=68.3

Q ss_pred             eeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHH
Q psy15394        245 AWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGT  324 (523)
Q Consensus       245 ~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~  324 (523)
                      .|+|+.+|+. ..+-+++..+....+              .++.|+|||.+|+|||||+++...++..    +-....+.
T Consensus        79 ~~~D~~~p~~-~~l~~~v~~i~~~~~--------------~g~kVvVHC~~GigRSgtviaA~lm~~~----~~~~~~~~  139 (180)
T COG2453          79 PILDGTVPDL-EDLDKIVDFIEEALS--------------KGKKVVVHCQGGIGRSGTVIAAYLMLYG----GLSLADEA  139 (180)
T ss_pred             eecCCCCCcH-HHHHHHHHHHHHHHh--------------cCCeEEEEcCCCCchHHHHHHHHHHHHc----CCCCHHHH
Confidence            5889999953 444444444443322              2458999999999999999998887753    44677788


Q ss_pred             HHHHHhccccCccChhHHHHHHHHHHHHH
Q psy15394        325 VKRIRSQRAHSIQMRDQYIFCHLALIEYA  353 (523)
Q Consensus       325 v~~lR~qR~~~Vqt~~QY~Fiy~alle~~  353 (523)
                      +.-+|..|++++.+..|+.|..+......
T Consensus       140 i~~~~~~r~~~v~~~~q~~~~~e~~~~~~  168 (180)
T COG2453         140 IAVKRRRRPGAVVTEIQHLFELEQELFRK  168 (180)
T ss_pred             HHHHHhcCCcccccHHHHHHHHHHHHHHh
Confidence            88899999999999999999888776543


No 44 
>KOG1720|consensus
Probab=98.69  E-value=5.4e-08  Score=90.91  Aligned_cols=64  Identities=27%  Similarity=0.322  Sum_probs=55.6

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL  501 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~~~i~~~~~  501 (523)
                      .|.|.|||-+|+||||+++|+.++..     -.+...+++-.||..|||+|++.+|+..+++--.-+..
T Consensus       147 ~g~iaVHCkaGlGRTG~liAc~lmy~-----~g~ta~eaI~~lR~~RpG~V~gpqQ~~l~~~q~~~~~~  210 (225)
T KOG1720|consen  147 GGKIAVHCKAGLGRTGTLIACYLMYE-----YGMTAGEAIAWLRICRPGAVIGPQQHKLLHKQRDLWLA  210 (225)
T ss_pred             cCeEEEEeccCCCchhHHHHHHHHHH-----hCCCHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHhh
Confidence            46899999999999999999988754     46889999999999999999999999998876654443


No 45 
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=98.63  E-value=3.1e-07  Score=82.36  Aligned_cols=56  Identities=20%  Similarity=0.304  Sum_probs=47.1

Q ss_pred             CCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHH
Q psy15394        285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFC  345 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fi  345 (523)
                      .++||+|||.+|+||||+++++..+...     ..++.+++..+|..|+.+..+..|+..+
T Consensus        77 ~~~~VlVHC~~G~~RS~~v~~~yl~~~~-----~~~~~~A~~~v~~~R~~~~p~~~~~~qL  132 (138)
T smart00195       77 KGGKVLVHCQAGVSRSATLIIAYLMKYR-----NLSLNDAYDFVKDRRPIISPNFGFLRQL  132 (138)
T ss_pred             CCCeEEEECCCCCchHHHHHHHHHHHHh-----CCCHHHHHHHHHHHCCccCCCHhHHHHH
Confidence            3579999999999999999998765532     3689999999999999998888776554


No 46 
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=98.56  E-value=9.6e-08  Score=92.22  Aligned_cols=56  Identities=27%  Similarity=0.412  Sum_probs=47.7

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLA  495 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~~~  495 (523)
                      +++|+|||.+|+||||+++|+.++ +     ...+..+++..||..||+++ +..|+.|+.+.
T Consensus       170 g~~VaVHC~AGlGRTGtl~AayLI-~-----~GmspeeAI~~VR~~RPgAI-n~~Q~~fL~~y  225 (241)
T PTZ00393        170 NRAVAVHCVAGLGRAPVLASIVLI-E-----FGMDPIDAIVFIRDRRKGAI-NKRQLQFLKAY  225 (241)
T ss_pred             CCeEEEECCCCCCHHHHHHHHHHH-H-----cCCCHHHHHHHHHHHCCCCC-CHHHHHHHHHH
Confidence            459999999999999999988764 2     24699999999999999998 57899887654


No 47 
>PF00782 DSPc:  Dual specificity phosphatase, catalytic domain;  InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []:   (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases   Based on their cellular localisation, PTPases are also classified as:   Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases []   All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits.  This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=98.47  E-value=8.2e-07  Score=78.96  Aligned_cols=57  Identities=19%  Similarity=0.335  Sum_probs=47.6

Q ss_pred             CCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHH
Q psy15394        286 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL  347 (523)
Q Consensus       286 ~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~  347 (523)
                      +++|+|||.+|+||||+++++..+...     ..++.+.++.+|+.|+.+..+..|+..++.
T Consensus        73 ~~~VlVHC~~G~~RS~~v~~ayLm~~~-----~~~~~~A~~~v~~~rp~~~~~~~~~~~L~~  129 (133)
T PF00782_consen   73 GGKVLVHCKAGLSRSGAVAAAYLMKKN-----GMSLEEAIEYVRSRRPQINPNPSFIRQLYE  129 (133)
T ss_dssp             TSEEEEEESSSSSHHHHHHHHHHHHHH-----TSSHHHHHHHHHHHSTTSTHHHHHHHHHHH
T ss_pred             cceeEEEeCCCcccchHHHHHHHHHHc-----CCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
Confidence            578999999999999999998776533     359999999999999999888777765543


No 48 
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=98.38  E-value=6.9e-07  Score=79.91  Aligned_cols=55  Identities=22%  Similarity=0.306  Sum_probs=46.7

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFC  492 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~  492 (523)
                      ++||+|||.+|.||||+||+...+...     ..++.++++.+|++|+....+..+...+
T Consensus        81 ~~~vlVHC~~G~~Rs~~~~~~~l~~~~-----~~~~~~a~~~vr~~r~~~~~~~~~~~~l  135 (139)
T cd00127          81 GGKVLVHCLAGVSRSATLVIAYLMKTL-----GLSLREAYEFVKSRRPIISPNAGFMRQL  135 (139)
T ss_pred             CCcEEEECCCCCchhHHHHHHHHHHHc-----CCCHHHHHHHHHHHCCccCCCHHHHHHH
Confidence            369999999999999999997766433     6799999999999999988887776554


No 49 
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=98.19  E-value=2.8e-06  Score=76.11  Aligned_cols=55  Identities=18%  Similarity=0.259  Sum_probs=46.9

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFC  492 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~  492 (523)
                      ++||+|||.+|.||||+++++..+.     ....++.++++.+|..|+.+..+..|+.-+
T Consensus        78 ~~~VlVHC~~G~~RS~~v~~~yl~~-----~~~~~~~~A~~~v~~~R~~~~p~~~~~~qL  132 (138)
T smart00195       78 GGKVLVHCQAGVSRSATLIIAYLMK-----YRNLSLNDAYDFVKDRRPIISPNFGFLRQL  132 (138)
T ss_pred             CCeEEEECCCCCchHHHHHHHHHHH-----HhCCCHHHHHHHHHHHCCccCCCHhHHHHH
Confidence            4699999999999999999987653     235799999999999999999888877554


No 50 
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=98.07  E-value=7.8e-06  Score=77.01  Aligned_cols=63  Identities=22%  Similarity=0.333  Sum_probs=52.1

Q ss_pred             CCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHH
Q psy15394        434 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA  500 (523)
Q Consensus       434 ~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~~~i~~~~  500 (523)
                      +.|+|||..|+|||||+++...++.    .+.....+.+.-+|..|++.+.+..|+.|..+.....-
T Consensus       106 ~kVvVHC~~GigRSgtviaA~lm~~----~~~~~~~~~i~~~~~~r~~~v~~~~q~~~~~e~~~~~~  168 (180)
T COG2453         106 KKVVVHCQGGIGRSGTVIAAYLMLY----GGLSLADEAIAVKRRRRPGAVVTEIQHLFELEQELFRK  168 (180)
T ss_pred             CeEEEEcCCCCchHHHHHHHHHHHH----cCCCCHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHh
Confidence            4899999999999999999888764    24556777788889999999999999999887765543


No 51 
>PF00782 DSPc:  Dual specificity phosphatase, catalytic domain;  InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []:   (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases   Based on their cellular localisation, PTPases are also classified as:   Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases []   All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits.  This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=98.00  E-value=5e-06  Score=73.88  Aligned_cols=57  Identities=19%  Similarity=0.335  Sum_probs=47.6

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL  494 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~~  494 (523)
                      +++|+|||.+|+||||+++++..+..     ...++.+.++.+|..||.+..+..|+..+++
T Consensus        73 ~~~VlVHC~~G~~RS~~v~~ayLm~~-----~~~~~~~A~~~v~~~rp~~~~~~~~~~~L~~  129 (133)
T PF00782_consen   73 GGKVLVHCKAGLSRSGAVAAAYLMKK-----NGMSLEEAIEYVRSRRPQINPNPSFIRQLYE  129 (133)
T ss_dssp             TSEEEEEESSSSSHHHHHHHHHHHHH-----HTSSHHHHHHHHHHHSTTSTHHHHHHHHHHH
T ss_pred             cceeEEEeCCCcccchHHHHHHHHHH-----cCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
Confidence            46999999999999999999877642     3459999999999999999888888766553


No 52 
>PRK12361 hypothetical protein; Provisional
Probab=97.95  E-value=4.9e-05  Score=83.93  Aligned_cols=81  Identities=17%  Similarity=0.246  Sum_probs=60.1

Q ss_pred             eccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHH
Q psy15394        246 WLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTV  325 (523)
Q Consensus       246 Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v  325 (523)
                      ..|+..| +...+-+.++.+.+..+              .+++|+|||.+|.|||+++++...+..    ....++.+++
T Consensus       150 i~D~~~p-~~~~l~~a~~~i~~~~~--------------~~~~VlVHC~~G~sRSa~vv~ayLm~~----~~~~~~~eA~  210 (547)
T PRK12361        150 ILDHSVP-TLAQLNQAINWIHRQVR--------------ANKSVVVHCALGRGRSVLVLAAYLLCK----DPDLTVEEVL  210 (547)
T ss_pred             cCCCCCC-cHHHHHHHHHHHHHHHH--------------CCCeEEEECCCCCCcHHHHHHHHHHHh----ccCCCHHHHH
Confidence            3366666 45555555555544322              357999999999999999999876543    2357999999


Q ss_pred             HHHHhccccCccChhHHHHH
Q psy15394        326 KRIRSQRAHSIQMRDQYIFC  345 (523)
Q Consensus       326 ~~lR~qR~~~Vqt~~QY~Fi  345 (523)
                      ..+|+.|+.+..+..|...+
T Consensus       211 ~~vr~~Rp~v~~n~~q~~~l  230 (547)
T PRK12361        211 QQIKQIRKTARLNKRQLRAL  230 (547)
T ss_pred             HHHHHHCCCCCCCHHHHHHH
Confidence            99999999999999887543


No 53 
>PF05706 CDKN3:  Cyclin-dependent kinase inhibitor 3 (CDKN3);  InterPro: IPR022778  This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=97.71  E-value=9.7e-05  Score=67.62  Aligned_cols=92  Identities=20%  Similarity=0.296  Sum_probs=47.6

Q ss_pred             HHHHHhcCCcEEEEcCCcccCCccccccccCCCCCCeeEecceeEEEeEEEeCCCceEEEeeeeccCCCceeEEEEEEEe
Q psy15394        165 WRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFT  244 (523)
Q Consensus       165 W~MVwe~~v~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~l~~~~~~~~r~V~h~~y~  244 (523)
                      -.-+..+.+..||.|+...|..+..    +|.       ++.                         .-+.+-+..+|| 
T Consensus        64 L~~Lk~~G~~~Vvtl~~~~EL~~l~----Vp~-------L~~-------------------------~~~~~Gi~~~h~-  106 (168)
T PF05706_consen   64 LERLKDWGAQDVVTLLTDHELARLG----VPD-------LGE-------------------------AAQARGIAWHHL-  106 (168)
T ss_dssp             HHHHHHTT--EEEE-S-HHHHHHTT-----TT-------HHH-------------------------HHHHTT-EEEE--
T ss_pred             HHHHHHCCCCEEEEeCcHHHHHHcC----Ccc-------HHH-------------------------HHHHcCCEEEec-
Confidence            4567788999999999877754432    231       110                         001122333344 


Q ss_pred             eeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHH
Q psy15394        245 AWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDI  308 (523)
Q Consensus       245 ~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~  308 (523)
                      -+||.++|. ...+..++..+...-.              .+..|+|||..|.||||+++|.-.
T Consensus       107 PI~D~~aPd-~~~~~~i~~eL~~~L~--------------~g~~V~vHC~GGlGRtGlvAAcLL  155 (168)
T PF05706_consen  107 PIPDGSAPD-FAAAWQILEELAARLE--------------NGRKVLVHCRGGLGRTGLVAACLL  155 (168)
T ss_dssp             ---TTS----HHHHHHHHHHHHHHHH--------------TT--EEEE-SSSSSHHHHHHHHHH
T ss_pred             CccCCCCCC-HHHHHHHHHHHHHHHH--------------cCCEEEEECCCCCCHHHHHHHHHH
Confidence            588999994 5566666666554432              246899999999999999988543


No 54 
>PF03162 Y_phosphatase2:  Tyrosine phosphatase family;  InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []:   (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases   Based on their cellular localisation, PTPases are also classified as:   Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases []   All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits.  This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=97.41  E-value=0.00039  Score=64.43  Aligned_cols=71  Identities=23%  Similarity=0.281  Sum_probs=40.1

Q ss_pred             EEEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCC
Q psy15394        238 VAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG  317 (523)
Q Consensus       238 V~h~~y~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~  317 (523)
                      +.|+....|.+..++.+...+.+.++.+...                ...||+|||..|..|||+.+|+.--+      .
T Consensus        59 l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~----------------~n~PvLiHC~~G~~rTG~vvg~lRk~------Q  116 (164)
T PF03162_consen   59 LIHIPMSSSKDPWVPISEEQVAEALEIILDP----------------RNYPVLIHCNHGKDRTGLVVGCLRKL------Q  116 (164)
T ss_dssp             EEE-------GGG----HHHHHHHHHHHH-G----------------GG-SEEEE-SSSSSHHHHHHHHHHHH------T
T ss_pred             EEEeccccccCccccCCHHHHHHHHHHHhCC----------------CCCCEEEEeCCCCcchhhHHHHHHHH------c
Confidence            4445555554445666677777777665432                24699999999999999999965533      3


Q ss_pred             ccCHHHHHHHHHh
Q psy15394        318 TVDVRGTVKRIRS  330 (523)
Q Consensus       318 ~vdv~~~v~~lR~  330 (523)
                      .-++.+++..+|.
T Consensus       117 ~W~~~~i~~Ey~~  129 (164)
T PF03162_consen  117 GWSLSSIFDEYRR  129 (164)
T ss_dssp             TB-HHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            4677777777775


No 55 
>KOG2836|consensus
Probab=97.25  E-value=0.00047  Score=60.16  Aligned_cols=54  Identities=30%  Similarity=0.536  Sum_probs=43.8

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH  493 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~  493 (523)
                      +.-|.|||-+|+||+-++.|+..+      +......+.|..+|++|.|++.+ .|..|+-
T Consensus        97 ~~cvavhcvaglgrapvlvalali------e~gmkyedave~ir~krrga~n~-kql~~le  150 (173)
T KOG2836|consen   97 GCCVAVHCVAGLGRAPVLVALALI------EAGMKYEDAVEMIRQKRRGAINS-KQLLYLE  150 (173)
T ss_pred             CCeEEEEeecccCcchHHHHHHHH------HccccHHHHHHHHHHHhhccccH-HHHHHHH
Confidence            357999999999999999988765      34456678999999999999955 6766653


No 56 
>PF14566 PTPlike_phytase:  Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=97.13  E-value=0.00098  Score=60.76  Aligned_cols=50  Identities=26%  Similarity=0.377  Sum_probs=34.0

Q ss_pred             eeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHH
Q psy15394        245 AWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI  310 (523)
Q Consensus       245 ~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l  310 (523)
                      ..+|+..| ++..+=.|+..++..               |.+..+++||.+|.|||.||.++..++
T Consensus        99 pitd~~~P-~~~~iD~fi~~v~~~---------------p~~~~l~fhC~~G~GRTTt~Mv~~~li  148 (149)
T PF14566_consen   99 PITDHQAP-DPEDIDAFINFVKSL---------------PKDTWLHFHCQAGRGRTTTFMVMYDLI  148 (149)
T ss_dssp             EE-TTS----HHHHHHHHHHHHTS----------------TT-EEEEE-SSSSHHHHHHHHHHHHH
T ss_pred             eCCCcCCC-CHHHHHHHHHHHHhC---------------CCCCeEEEECCCCCCHHHHHHHHHHHh
Confidence            45688777 466777777776643               345689999999999999999987765


No 57 
>PRK12361 hypothetical protein; Provisional
Probab=97.07  E-value=0.00098  Score=73.69  Aligned_cols=57  Identities=18%  Similarity=0.287  Sum_probs=48.2

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH  493 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~  493 (523)
                      +++|+|||.+|.|||+++++...+.    +....++.++++.+|+.||....+..|...+-
T Consensus       175 ~~~VlVHC~~G~sRSa~vv~ayLm~----~~~~~~~~eA~~~vr~~Rp~v~~n~~q~~~l~  231 (547)
T PRK12361        175 NKSVVVHCALGRGRSVLVLAAYLLC----KDPDLTVEEVLQQIKQIRKTARLNKRQLRALE  231 (547)
T ss_pred             CCeEEEECCCCCCcHHHHHHHHHHH----hccCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
Confidence            4699999999999999999887553    23467999999999999999999999876554


No 58 
>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=96.31  E-value=0.021  Score=51.28  Aligned_cols=52  Identities=23%  Similarity=0.395  Sum_probs=37.4

Q ss_pred             CCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccCh
Q psy15394        284 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMR  339 (523)
Q Consensus       284 ~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~  339 (523)
                      |...|++|||-+|+|||-....+..+.    -....|-.++..+||.-++.+-.+.
T Consensus        91 p~~apllIHC~aGISRStA~A~i~a~a----la~~~de~ela~~Lra~sp~atPN~  142 (172)
T COG5350          91 PRFAPLLIHCYAGISRSTAAALIAALA----LAPDMDETELAERLRALSPYATPNP  142 (172)
T ss_pred             ccccceeeeeccccccchHHHHHHHHh----hccccChHHHHHHHHhcCcccCCCh
Confidence            356799999999999997655443221    1234567778889999898886665


No 59 
>KOG2283|consensus
Probab=96.12  E-value=0.0096  Score=63.30  Aligned_cols=90  Identities=17%  Similarity=0.240  Sum_probs=58.0

Q ss_pred             eeeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHH
Q psy15394        244 TAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRG  323 (523)
Q Consensus       244 ~~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~  323 (523)
                      .+||||++|. ...+..|.+.+...-.            .....=++|||-+|-||||+.++..++...+-.    .-.+
T Consensus        78 ~~~~Dh~~P~-L~~l~~~c~~~~~WL~------------~d~~nVvvvHCk~Gkgrtg~~icA~L~~~~~~~----ta~e  140 (434)
T KOG2283|consen   78 FGFDDHNPPP-LELLCPFCKSMDNWLS------------EDPKNVVVVHCKAGKGRTGVMICAYLIYSGISA----TAEE  140 (434)
T ss_pred             cCCCCCCCCc-HHHHHHHHHCHHHHHh------------cCccceEEEEccCCCcceEEEEeHHHHhhhhcC----CHHH
Confidence            5899999994 5666677766665532            224456899999999999999887776655532    1222


Q ss_pred             HHHHHHhcc---c--cCccChhHHHHHHHHHH
Q psy15394        324 TVKRIRSQR---A--HSIQMRDQYIFCHLALI  350 (523)
Q Consensus       324 ~v~~lR~qR---~--~~Vqt~~QY~Fiy~all  350 (523)
                      .+..+-..|   .  +-+-.+.|-.|++..-.
T Consensus       141 ald~~~~kR~~~~~~~~~~~PSq~RYv~Y~~~  172 (434)
T KOG2283|consen  141 ALDYFNEKRFDEGKSKGVTIPSQRRYVGYFSR  172 (434)
T ss_pred             HHHHHhhhhccccccCCccCchhhHHHHHHHH
Confidence            333333334   2  34667778777765433


No 60 
>KOG1718|consensus
Probab=95.93  E-value=0.03  Score=51.18  Aligned_cols=46  Identities=26%  Similarity=0.536  Sum_probs=33.1

Q ss_pred             CCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccC
Q psy15394        285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHS  335 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~  335 (523)
                      .+|-.+|||-|||+||+++|.+..+-.     ...++.+.-..+...|+-.
T Consensus        93 ~gG~TLvHC~AGVSRSAsLClAYLmK~-----~~msLreAy~~vKa~RpiI  138 (198)
T KOG1718|consen   93 RGGKTLVHCVAGVSRSASLCLAYLMKY-----HCMSLREAYHWVKARRPII  138 (198)
T ss_pred             cCCcEEEEEccccchhHHHHHHHHHHH-----ccchHHHHHHHHHhhCcee
Confidence            457899999999999999999876532     2356666655555555543


No 61 
>KOG1719|consensus
Probab=95.81  E-value=0.044  Score=49.38  Aligned_cols=61  Identities=23%  Similarity=0.328  Sum_probs=49.5

Q ss_pred             CCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHH
Q psy15394        285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL  354 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~  354 (523)
                      .+..+-|||-||=|||.|.++.+.+..     +.......+..+|+.|+...--+.|.    +++.||..
T Consensus       108 LGktvYVHCKAGRtRSaTvV~cYLmq~-----~~wtpe~A~~~vr~iRp~VlL~~~Qw----~~l~ef~~  168 (183)
T KOG1719|consen  108 LGKTVYVHCKAGRTRSATVVACYLMQH-----KNWTPEAAVEHVRKIRPRVLLRPAQW----DVLKEFYK  168 (183)
T ss_pred             cCCeEEEEecCCCccchhhhhhhhhhh-----cCCCHHHHHHHHHhcCcceeecHHHH----HHHHHHHH
Confidence            345789999999999999998876543     45678889999999999999888886    56666654


No 62 
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=95.81  E-value=0.061  Score=48.11  Aligned_cols=42  Identities=24%  Similarity=0.442  Sum_probs=31.8

Q ss_pred             CCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhcccc
Q psy15394        286 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH  334 (523)
Q Consensus       286 ~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~  334 (523)
                      .+||++||.+|- |||++.++....     .+ ++...++...|..-..
T Consensus        86 ~~pvL~HC~sG~-Rt~~l~al~~~~-----~g-~~~~~i~~~~~~~G~~  127 (135)
T TIGR01244        86 EGPVLAYCRSGT-RSSLLWGFRQAA-----EG-VPVEEIVRRAQAAGYD  127 (135)
T ss_pred             CCCEEEEcCCCh-HHHHHHHHHHHH-----cC-CCHHHHHHHHHHcCCC
Confidence            379999999999 999999876543     12 6778888887765443


No 63 
>KOG1719|consensus
Probab=95.78  E-value=0.022  Score=51.30  Aligned_cols=61  Identities=21%  Similarity=0.292  Sum_probs=50.7

Q ss_pred             CCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHc
Q psy15394        434 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR  503 (523)
Q Consensus       434 ~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~~~i~~~~~~~  503 (523)
                      .-+-|||.+|-|||.|..+++.+.     .....+...+..||+.||..+--..|.    +++.+|-...
T Consensus       110 ktvYVHCKAGRtRSaTvV~cYLmq-----~~~wtpe~A~~~vr~iRp~VlL~~~Qw----~~l~ef~~~~  170 (183)
T KOG1719|consen  110 KTVYVHCKAGRTRSATVVACYLMQ-----HKNWTPEAAVEHVRKIRPRVLLRPAQW----DVLKEFYKQI  170 (183)
T ss_pred             CeEEEEecCCCccchhhhhhhhhh-----hcCCCHHHHHHHHHhcCcceeecHHHH----HHHHHHHHHH
Confidence            479999999999999998887763     456788899999999999999999996    6677766543


No 64 
>PF13350 Y_phosphatase3:  Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=95.59  E-value=0.018  Score=53.18  Aligned_cols=37  Identities=24%  Similarity=0.144  Sum_probs=22.3

Q ss_pred             eeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCc
Q psy15394        150 FISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGR  187 (523)
Q Consensus       150 yIatQ~Pl~~T~~dFW~MVwe~~v~~IVmLt~~~E~~~  187 (523)
                      ++=+=.|..-|-.|.+.+. +.++..||=|-...|..+
T Consensus        21 lyRS~~l~~lt~~d~~~L~-~lgI~tIiDLRs~~E~~~   57 (164)
T PF13350_consen   21 LYRSGNLSNLTEADLERLR-ELGIRTIIDLRSPTERER   57 (164)
T ss_dssp             EEEES--TT--HHHHHHHH-HTT--EEEE-S-HHHHHH
T ss_pred             EEecCCcCcCCHHHHHHHH-hCCCCEEEECCCcccccc
Confidence            3335556677888988888 999999999998888544


No 65 
>KOG1716|consensus
Probab=95.54  E-value=0.041  Score=55.70  Aligned_cols=49  Identities=22%  Similarity=0.381  Sum_probs=40.4

Q ss_pred             CCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccCh
Q psy15394        286 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMR  339 (523)
Q Consensus       286 ~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~  339 (523)
                      ++-++|||.+|++||.+++.++++...     ..++.+....++..|+....+.
T Consensus       155 ~~~vlVHC~~GvSRSat~viAYlM~~~-----~~~l~~A~~~vk~~R~~i~PN~  203 (285)
T KOG1716|consen  155 GGKVLVHCQAGVSRSATLVIAYLMKYE-----GLSLEDAYELVKSRRPIISPNF  203 (285)
T ss_pred             CCeEEEEcCCccchhHHHHHHHHHHHc-----CCCHHHHHHHHHHhCCccCCCH
Confidence            568999999999999999998877644     4688888888888888876643


No 66 
>PF03162 Y_phosphatase2:  Tyrosine phosphatase family;  InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []:   (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases   Based on their cellular localisation, PTPases are also classified as:   Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases []   All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits.  This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=94.96  E-value=0.024  Score=52.53  Aligned_cols=39  Identities=21%  Similarity=0.330  Sum_probs=29.3

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHh
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRS  477 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~  477 (523)
                      ..||+|||..|..|||+.+++..-      -+..++.+++..+|.
T Consensus        91 n~PvLiHC~~G~~rTG~vvg~lRk------~Q~W~~~~i~~Ey~~  129 (164)
T PF03162_consen   91 NYPVLIHCNHGKDRTGLVVGCLRK------LQGWSLSSIFDEYRR  129 (164)
T ss_dssp             G-SEEEE-SSSSSHHHHHHHHHHH------HTTB-HHHHHHHHHH
T ss_pred             CCCEEEEeCCCCcchhhHHHHHHH------HcCCCHHHHHHHHHH
Confidence            359999999999999999986553      246788888888875


No 67 
>PF05706 CDKN3:  Cyclin-dependent kinase inhibitor 3 (CDKN3);  InterPro: IPR022778  This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=94.88  E-value=0.016  Score=53.20  Aligned_cols=22  Identities=36%  Similarity=0.822  Sum_probs=16.5

Q ss_pred             CCeEEecCCCCCccchhhHHHH
Q psy15394        434 PPIIVHCSAGIGRTGTLCTLDI  455 (523)
Q Consensus       434 ~pivVHCs~G~gRtg~f~~~~~  455 (523)
                      ..|+|||..|+||||+++|+-.
T Consensus       134 ~~V~vHC~GGlGRtGlvAAcLL  155 (168)
T PF05706_consen  134 RKVLVHCRGGLGRTGLVAACLL  155 (168)
T ss_dssp             --EEEE-SSSSSHHHHHHHHHH
T ss_pred             CEEEEECCCCCCHHHHHHHHHH
Confidence            5899999999999998876544


No 68 
>KOG1718|consensus
Probab=94.77  E-value=0.033  Score=50.91  Aligned_cols=49  Identities=24%  Similarity=0.470  Sum_probs=35.3

Q ss_pred             CCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCC
Q psy15394        432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQM  485 (523)
Q Consensus       432 ~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t  485 (523)
                      .+|.++|||-+|+.|+.++|.+..+-     ....++.+.-+.+...||-.=.+
T Consensus        93 ~gG~TLvHC~AGVSRSAsLClAYLmK-----~~~msLreAy~~vKa~RpiIRPN  141 (198)
T KOG1718|consen   93 RGGKTLVHCVAGVSRSASLCLAYLMK-----YHCMSLREAYHWVKARRPIIRPN  141 (198)
T ss_pred             cCCcEEEEEccccchhHHHHHHHHHH-----HccchHHHHHHHHHhhCceeCCC
Confidence            35799999999999999999988763     23456666666666666544433


No 69 
>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=94.76  E-value=0.052  Score=48.81  Aligned_cols=57  Identities=23%  Similarity=0.480  Sum_probs=39.8

Q ss_pred             cccCCCCCCCCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHH
Q psy15394        424 GDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD  487 (523)
Q Consensus       424 ~~~~~~~~~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~  487 (523)
                      .+.|+   ...|++|||.+|++||-....+ ..+..   ....|-.++.++||.-+|..-.+.-
T Consensus        87 ~~~wp---~~apllIHC~aGISRStA~A~i-~a~al---a~~~de~ela~~Lra~sp~atPN~R  143 (172)
T COG5350          87 ADEWP---RFAPLLIHCYAGISRSTAAALI-AALAL---APDMDETELAERLRALSPYATPNPR  143 (172)
T ss_pred             HhcCc---cccceeeeeccccccchHHHHH-HHHhh---ccccChHHHHHHHHhcCcccCCChh
Confidence            34565   4579999999999999654332 22211   2345778889999999998866654


No 70 
>KOG1717|consensus
Probab=94.51  E-value=0.11  Score=50.86  Aligned_cols=66  Identities=18%  Similarity=0.303  Sum_probs=41.0

Q ss_pred             CCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHHHHHHHhccccCccChhHHHHHHHHHHHHHHHcCCCCC
Q psy15394        287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISA  361 (523)
Q Consensus       287 ~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~alle~~~~~~~~~~  361 (523)
                      .-++|||-|||.|+-|.++.+.+-...     +++-+....+.+.+.+.-.+   |-|..+. +.|-...|+-.+
T Consensus       252 cgvLVHClaGISRSvTvtvaYLMqkl~-----lslndAyd~Vk~kksnisPN---FnFMgQL-ldfertlgl~s~  317 (343)
T KOG1717|consen  252 CGVLVHCLAGISRSVTVTVAYLMQKLN-----LSLNDAYDFVKHKKSNISPN---FNFMGQL-LDFERTLGLESR  317 (343)
T ss_pred             CcEEEeeeccccchhHHHHHHHHHHhc-----cchhhHHHHHHHhccCCCCC---cchhHHH-HHHHHHhhccCc
Confidence            469999999999999999887654432     44555555555555554433   4565554 344444555444


No 71 
>PF13350 Y_phosphatase3:  Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=94.11  E-value=0.03  Score=51.73  Aligned_cols=23  Identities=39%  Similarity=0.834  Sum_probs=17.9

Q ss_pred             CCeEEecCCCCCccchhhHHHHH
Q psy15394        434 PPIIVHCSAGIGRTGTLCTLDIC  456 (523)
Q Consensus       434 ~pivVHCs~G~gRtg~f~~~~~~  456 (523)
                      +|+++||++|--|||+.+++-..
T Consensus       125 ~p~l~HC~aGKDRTG~~~alll~  147 (164)
T PF13350_consen  125 GPVLFHCTAGKDRTGVVAALLLS  147 (164)
T ss_dssp             --EEEE-SSSSSHHHHHHHHHHH
T ss_pred             CcEEEECCCCCccHHHHHHHHHH
Confidence            59999999999999998887654


No 72 
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=93.68  E-value=0.086  Score=47.15  Aligned_cols=41  Identities=22%  Similarity=0.387  Sum_probs=30.9

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccc
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRA  480 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~  480 (523)
                      .+||++||.+|- |||++.++....     . .++...++...|..-.
T Consensus        86 ~~pvL~HC~sG~-Rt~~l~al~~~~-----~-g~~~~~i~~~~~~~G~  126 (135)
T TIGR01244        86 EGPVLAYCRSGT-RSSLLWGFRQAA-----E-GVPVEEIVRRAQAAGY  126 (135)
T ss_pred             CCCEEEEcCCCh-HHHHHHHHHHHH-----c-CCCHHHHHHHHHHcCC
Confidence            379999999999 999988765432     2 2677888887776543


No 73 
>PF14566 PTPlike_phytase:  Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=93.18  E-value=0.044  Score=49.91  Aligned_cols=26  Identities=35%  Similarity=0.487  Sum_probs=20.8

Q ss_pred             CCCCeEEecCCCCCccchhhHHHHHH
Q psy15394        432 RGPPIIVHCSAGIGRTGTLCTLDICI  457 (523)
Q Consensus       432 ~~~pivVHCs~G~gRtg~f~~~~~~~  457 (523)
                      ....+++||.+|.|||.+|.++..++
T Consensus       123 ~~~~l~fhC~~G~GRTTt~Mv~~~li  148 (149)
T PF14566_consen  123 KDTWLHFHCQAGRGRTTTFMVMYDLI  148 (149)
T ss_dssp             TT-EEEEE-SSSSHHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCCHHHHHHHHHHHh
Confidence            45689999999999999999887665


No 74 
>PF04273 DUF442:  Putative phosphatase (DUF442);  InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=93.09  E-value=0.22  Score=42.93  Aligned_cols=38  Identities=21%  Similarity=0.421  Sum_probs=26.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHH
Q psy15394        254 SALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDIC  309 (523)
Q Consensus       254 ~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~  309 (523)
                      +...+..|.+.+..                 ..+||++||..|. |++++.++.-.
T Consensus        71 ~~~~v~~f~~~l~~-----------------~~~Pvl~hC~sG~-Ra~~l~~l~~~  108 (110)
T PF04273_consen   71 TEEDVEAFADALES-----------------LPKPVLAHCRSGT-RASALWALAQA  108 (110)
T ss_dssp             -HHHHHHHHHHHHT-----------------TTTSEEEE-SCSH-HHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHh-----------------CCCCEEEECCCCh-hHHHHHHHHhh
Confidence            56677777666543                 2369999999998 99998887543


No 75 
>PLN02727 NAD kinase
Probab=92.95  E-value=0.24  Score=56.77  Aligned_cols=41  Identities=22%  Similarity=0.257  Sum_probs=33.1

Q ss_pred             CChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHH
Q psy15394        253 ESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDIC  309 (523)
Q Consensus       253 ~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~  309 (523)
                      .+.+.+.+|.+.++..                ...||++||..|.+|||++.|.+..
T Consensus       324 pt~EqVe~fa~~l~~s----------------lpkPVLvHCKSGarRAGamvA~yl~  364 (986)
T PLN02727        324 PSAEQVEKFASLVSDS----------------SKKPIYLHSKEGVWRTSAMVSRWKQ  364 (986)
T ss_pred             CCHHHHHHHHHHHHhh----------------cCCCEEEECCCCCchHHHHHHHHHH
Confidence            3678888888877442                2369999999999999999998765


No 76 
>KOG1716|consensus
Probab=92.45  E-value=0.17  Score=51.16  Aligned_cols=48  Identities=23%  Similarity=0.403  Sum_probs=40.6

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCC
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQM  485 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t  485 (523)
                      ++-++|||.+|++|+.++++.+++.     ....++.+..+.++..|+....+
T Consensus       155 ~~~vlVHC~~GvSRSat~viAYlM~-----~~~~~l~~A~~~vk~~R~~i~PN  202 (285)
T KOG1716|consen  155 GGKVLVHCQAGVSRSATLVIAYLMK-----YEGLSLEDAYELVKSRRPIISPN  202 (285)
T ss_pred             CCeEEEEcCCccchhHHHHHHHHHH-----HcCCCHHHHHHHHHHhCCccCCC
Confidence            4689999999999999999888874     34678889999999999888665


No 77 
>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
Probab=91.84  E-value=0.14  Score=50.79  Aligned_cols=28  Identities=32%  Similarity=0.586  Sum_probs=23.9

Q ss_pred             CCCEEEEcCCCCchhhHHHHHHHHHHhc
Q psy15394        286 GPPIIVHCSAGIGRTGTLCTLDICISRL  313 (523)
Q Consensus       286 ~~PivVHCsaGvGRTGtfiaid~~l~~l  313 (523)
                      ++|+++||.+|.-|||.++|+...+...
T Consensus       136 ~~PvL~HC~~GkdRTGl~~al~r~~~~~  163 (249)
T COG2365         136 NGPVLIHCTAGKDRTGLVAALYRKLVGG  163 (249)
T ss_pred             cCCEEEecCCCCcchHHHHHHHHHHhCC
Confidence            4799999999999999999987665443


No 78 
>KOG1717|consensus
Probab=90.92  E-value=0.41  Score=46.99  Aligned_cols=68  Identities=18%  Similarity=0.300  Sum_probs=42.2

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCC
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAK  509 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~Qy~f~~~~i~~~~~~~~~~~~~  509 (523)
                      ..-++|||-+|+.|+-|.|+.+.+-..     .++.-+...-+...+.+.-.+   +.|..+. ++|=...|+-+.+
T Consensus       251 ~cgvLVHClaGISRSvTvtvaYLMqkl-----~lslndAyd~Vk~kksnisPN---FnFMgQL-ldfertlgl~s~~  318 (343)
T KOG1717|consen  251 NCGVLVHCLAGISRSVTVTVAYLMQKL-----NLSLNDAYDFVKHKKSNISPN---FNFMGQL-LDFERTLGLESRC  318 (343)
T ss_pred             CCcEEEeeeccccchhHHHHHHHHHHh-----ccchhhHHHHHHHhccCCCCC---cchhHHH-HHHHHHhhccCcc
Confidence            357999999999999999988765322     334444444444445554443   5677654 4555555554433


No 79 
>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
Probab=89.88  E-value=0.23  Score=49.19  Aligned_cols=25  Identities=36%  Similarity=0.741  Sum_probs=22.0

Q ss_pred             CCCeEEecCCCCCccchhhHHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDICI  457 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~~  457 (523)
                      ++|+++||.+|.-|||+..|+...+
T Consensus       136 ~~PvL~HC~~GkdRTGl~~al~r~~  160 (249)
T COG2365         136 NGPVLIHCTAGKDRTGLVAALYRKL  160 (249)
T ss_pred             cCCEEEecCCCCcchHHHHHHHHHH
Confidence            4799999999999999998887644


No 80 
>KOG4471|consensus
Probab=89.66  E-value=0.46  Score=51.49  Aligned_cols=26  Identities=35%  Similarity=0.700  Sum_probs=23.0

Q ss_pred             CCCCEEEEcCCCCchhhHHHHHHHHH
Q psy15394        285 RGPPIIVHCSAGIGRTGTLCTLDICI  310 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGtfiaid~~l  310 (523)
                      .+.||+||||+|=-||..+.++.+++
T Consensus       373 ~~~sVlVHCSDGWDRT~QlvsLA~Ll  398 (717)
T KOG4471|consen  373 ESRSVLVHCSDGWDRTAQLVSLAMLL  398 (717)
T ss_pred             CCceEEEEcCCCccchHHHHHHHHHH
Confidence            45799999999999999999987765


No 81 
>PLN02727 NAD kinase
Probab=84.12  E-value=0.71  Score=53.08  Aligned_cols=24  Identities=25%  Similarity=0.328  Sum_probs=22.1

Q ss_pred             CCCeEEecCCCCCccchhhHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDIC  456 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~  456 (523)
                      ..||++||..|.+|+|++.+++..
T Consensus       341 pkPVLvHCKSGarRAGamvA~yl~  364 (986)
T PLN02727        341 KKPIYLHSKEGVWRTSAMVSRWKQ  364 (986)
T ss_pred             CCCEEEECCCCCchHHHHHHHHHH
Confidence            469999999999999999998876


No 82 
>PF04273 DUF442:  Putative phosphatase (DUF442);  InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=83.45  E-value=0.67  Score=39.94  Aligned_cols=23  Identities=30%  Similarity=0.696  Sum_probs=18.2

Q ss_pred             CCCeEEecCCCCCccchhhHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDIC  456 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~  456 (523)
                      .+||++||..|. |++++.++...
T Consensus        86 ~~Pvl~hC~sG~-Ra~~l~~l~~~  108 (110)
T PF04273_consen   86 PKPVLAHCRSGT-RASALWALAQA  108 (110)
T ss_dssp             TTSEEEE-SCSH-HHHHHHHHHHH
T ss_pred             CCCEEEECCCCh-hHHHHHHHHhh
Confidence            369999999998 99988887654


No 83 
>KOG1572|consensus
Probab=82.25  E-value=3.1  Score=40.41  Aligned_cols=22  Identities=45%  Similarity=0.822  Sum_probs=19.7

Q ss_pred             CCCCEEEEcCCCCchhhHHHHH
Q psy15394        285 RGPPIIVHCSAGIGRTGTLCTL  306 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGtfiai  306 (523)
                      .+-|++|||.-|=-|||++++.
T Consensus       147 ~N~P~Lihc~rGkhRtg~lVgc  168 (249)
T KOG1572|consen  147 RNYPILIHCKRGKHRTGCLVGC  168 (249)
T ss_pred             cCCceEEecCCCCcchhhhHHH
Confidence            3569999999999999999984


No 84 
>KOG2283|consensus
Probab=81.37  E-value=1.5  Score=46.86  Aligned_cols=61  Identities=21%  Similarity=0.343  Sum_probs=38.1

Q ss_pred             CCCCeEEecCCCCCccchhhHHHHHHHHHhh--cCCCCHHHHHHHHHhccc--cCCCCHHHHHHHHHH
Q psy15394        432 RGPPIIVHCSAGIGRTGTLCTLDICISRLED--SGTVDVRGTVKRIRSQRA--HSIQMRDQYIFCHLA  495 (523)
Q Consensus       432 ~~~pivVHCs~G~gRtg~f~~~~~~~~~~~~--~~~v~v~~~v~~lR~qR~--~~v~t~~Qy~f~~~~  495 (523)
                      ...=++|||.+|-||||+.++...+...+-.  +..+|.+..-   |....  +-+-...|-+|++.-
T Consensus       106 ~~nVvvvHCk~Gkgrtg~~icA~L~~~~~~~ta~eald~~~~k---R~~~~~~~~~~~PSq~RYv~Y~  170 (434)
T KOG2283|consen  106 PKNVVVVHCKAGKGRTGVMICAYLIYSGISATAEEALDYFNEK---RFDEGKSKGVTIPSQRRYVGYF  170 (434)
T ss_pred             ccceEEEEccCCCcceEEEEeHHHHhhhhcCCHHHHHHHHhhh---hccccccCCccCchhhHHHHHH
Confidence            3446899999999999998766665544433  2233433322   21113  456778888888654


No 85 
>KOG2386|consensus
Probab=79.46  E-value=3.3  Score=43.50  Aligned_cols=83  Identities=23%  Similarity=0.282  Sum_probs=57.0

Q ss_pred             eeccCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEcCCCCchhhHHHHHHHHHHhccCCCccCHHHH
Q psy15394        245 AWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGT  324 (523)
Q Consensus       245 ~Wpd~gvP~~~~~ll~fi~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~  324 (523)
                      .=+.+++-++....-.|++.|.......          .....=|.|||..|..|||-+|+..++     ..+..++.++
T Consensus        93 ~c~g~~~vp~~~~v~~fv~~v~~f~~~~----------~~~~~LI~vhcthG~NrtgyLI~~yL~-----~~~~~s~~~a  157 (393)
T KOG2386|consen   93 NCPGRGVVPRTELVDKFVKLVKGFVDDT----------KLDDELIGVHCTHGLNRTGYLICAYLA-----DVGGYSSSEA  157 (393)
T ss_pred             ccCCcccCCCccchHHHHHHHHHHHhcc----------cCCCCEEEEeCCCcccccceeeeeeee-----eccCccHHHH
Confidence            3455564345566677777777665321          123457999999999999988764432     2334899999


Q ss_pred             HHHHHhccccCccChhHH
Q psy15394        325 VKRIRSQRAHSIQMRDQY  342 (523)
Q Consensus       325 v~~lR~qR~~~Vqt~~QY  342 (523)
                      ++.+-..|+..+.-.+-+
T Consensus       158 ik~f~~~r~~gi~k~dyi  175 (393)
T KOG2386|consen  158 IKRFADARPPGIEKQDYI  175 (393)
T ss_pred             HHHHHHhCCCccCchHHH
Confidence            999999999987665433


No 86 
>PF06602 Myotub-related:  Myotubularin-like phosphatase domain;  InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate []. Mutations in gene encoding myotubularin-related proteins have been associated with disease [].; GO: 0016791 phosphatase activity, 0016311 dephosphorylation; PDB: 1M7R_B 1LW3_A 1ZVR_A 1ZSQ_A 2YF0_A.
Probab=76.88  E-value=4.2  Score=42.44  Aligned_cols=26  Identities=38%  Similarity=0.740  Sum_probs=20.2

Q ss_pred             CCCCEEEEcCCCCchhhHHHHHHHHH
Q psy15394        285 RGPPIIVHCSAGIGRTGTLCTLDICI  310 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGtfiaid~~l  310 (523)
                      .+.+|+|||++|-.||..++++-.++
T Consensus       230 ~~~~Vlvh~~dGwDrt~q~~sL~ql~  255 (353)
T PF06602_consen  230 EGSSVLVHCSDGWDRTSQLSSLAQLL  255 (353)
T ss_dssp             T--EEEEECTTSSSHHHHHHHHHHHH
T ss_pred             cCceEEEEcCCCCcccHHHHHHHHHH
Confidence            35689999999999999888765544


No 87 
>KOG4471|consensus
Probab=76.74  E-value=1.9  Score=46.94  Aligned_cols=59  Identities=22%  Similarity=0.449  Sum_probs=39.3

Q ss_pred             CCCCeEEecCCCCCccchhhHHHHHH-----------HHHhhc---------------CC------------CCHHHHHH
Q psy15394        432 RGPPIIVHCSAGIGRTGTLCTLDICI-----------SRLEDS---------------GT------------VDVRGTVK  473 (523)
Q Consensus       432 ~~~pivVHCs~G~gRtg~f~~~~~~~-----------~~~~~~---------------~~------------v~v~~~v~  473 (523)
                      +..||+||||+|=-||.-+.++..++           +-|-+.               +.            +-..+.|.
T Consensus       373 ~~~sVlVHCSDGWDRT~QlvsLA~LlLDpYYRTieGFqvLVEkeWLsFGHkFadRvGhg~ns~~~ndrsPVFLQwlDcV~  452 (717)
T KOG4471|consen  373 ESRSVLVHCSDGWDRTAQLVSLAMLLLDPYYRTIEGFQVLVEKEWLSFGHKFADRVGHGNNSHGDNDRSPVFLQWLDCVW  452 (717)
T ss_pred             CCceEEEEcCCCccchHHHHHHHHHHhchhhhhhhhhHHHHHHHHHhcCChhhhhcCCCCCcccccccCchhHHHHHHHH
Confidence            35699999999999999877765542           111100               00            01346788


Q ss_pred             HHHhccccCCCCHHHHH
Q psy15394        474 RIRSQRAHSIQMRDQYI  490 (523)
Q Consensus       474 ~lR~qR~~~v~t~~Qy~  490 (523)
                      +|-.|-|.+++-.++|.
T Consensus       453 Ql~rqfP~aFEFne~fL  469 (717)
T KOG4471|consen  453 QLMRQFPCAFEFNEAFL  469 (717)
T ss_pred             HHHHhCCcccccCHHHH
Confidence            88889999888766653


No 88 
>KOG1089|consensus
Probab=71.11  E-value=7.4  Score=42.70  Aligned_cols=25  Identities=36%  Similarity=0.702  Sum_probs=21.1

Q ss_pred             CCCEEEEcCCCCchhhHHHHHHHHH
Q psy15394        286 GPPIIVHCSAGIGRTGTLCTLDICI  310 (523)
Q Consensus       286 ~~PivVHCsaGvGRTGtfiaid~~l  310 (523)
                      +.+||||||+|--||...+.+.-+|
T Consensus       344 ~~sVlvhcsdGwDrT~qV~SLaQll  368 (573)
T KOG1089|consen  344 GASVLVHCSDGWDRTCQVSSLAQLL  368 (573)
T ss_pred             CCeEEEEccCCcchhHHHHHHHHHH
Confidence            4699999999999999988876543


No 89 
>KOG1572|consensus
Probab=65.64  E-value=5  Score=39.06  Aligned_cols=23  Identities=39%  Similarity=0.626  Sum_probs=19.5

Q ss_pred             CCCeEEecCCCCCccchhhHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDI  455 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~  455 (523)
                      +-|+++||..|-.|||+++++--
T Consensus       148 N~P~Lihc~rGkhRtg~lVgclR  170 (249)
T KOG1572|consen  148 NYPILIHCKRGKHRTGCLVGCLR  170 (249)
T ss_pred             CCceEEecCCCCcchhhhHHHHH
Confidence            45999999999999998877543


No 90 
>PF06602 Myotub-related:  Myotubularin-like phosphatase domain;  InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate []. Mutations in gene encoding myotubularin-related proteins have been associated with disease [].; GO: 0016791 phosphatase activity, 0016311 dephosphorylation; PDB: 1M7R_B 1LW3_A 1ZVR_A 1ZSQ_A 2YF0_A.
Probab=55.22  E-value=7.8  Score=40.50  Aligned_cols=24  Identities=42%  Similarity=0.757  Sum_probs=19.0

Q ss_pred             CCCeEEecCCCCCccchhhHHHHH
Q psy15394        433 GPPIIVHCSAGIGRTGTLCTLDIC  456 (523)
Q Consensus       433 ~~pivVHCs~G~gRtg~f~~~~~~  456 (523)
                      +.+|+|||++|-.||..++++-.+
T Consensus       231 ~~~Vlvh~~dGwDrt~q~~sL~ql  254 (353)
T PF06602_consen  231 GSSVLVHCSDGWDRTSQLSSLAQL  254 (353)
T ss_dssp             --EEEEECTTSSSHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCcccHHHHHHHHH
Confidence            459999999999999888776553


No 91 
>KOG2386|consensus
Probab=50.42  E-value=14  Score=38.93  Aligned_cols=49  Identities=33%  Similarity=0.514  Sum_probs=37.5

Q ss_pred             CCeEEecCCCCCccchhhHHHHHHHHHhhcCCCCHHHHHHHHHhccccCCCCHH
Q psy15394        434 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD  487 (523)
Q Consensus       434 ~pivVHCs~G~gRtg~f~~~~~~~~~~~~~~~v~v~~~v~~lR~qR~~~v~t~~  487 (523)
                      .=|.|||..|..|||-+++..++     .....++.++++.+-..|+..+.-.+
T Consensus       125 ~LI~vhcthG~NrtgyLI~~yL~-----~~~~~s~~~aik~f~~~r~~gi~k~d  173 (393)
T KOG2386|consen  125 ELIGVHCTHGLNRTGYLICAYLA-----DVGGYSSSEAIKRFADARPPGIEKQD  173 (393)
T ss_pred             CEEEEeCCCcccccceeeeeeee-----eccCccHHHHHHHHHHhCCCccCchH
Confidence            47999999999999965543332     23348999999999999988876543


No 92 
>KOG1089|consensus
Probab=43.66  E-value=17  Score=39.91  Aligned_cols=22  Identities=36%  Similarity=0.678  Sum_probs=18.9

Q ss_pred             CCeEEecCCCCCccchhhHHHH
Q psy15394        434 PPIIVHCSAGIGRTGTLCTLDI  455 (523)
Q Consensus       434 ~pivVHCs~G~gRtg~f~~~~~  455 (523)
                      -+||||||+|--||-..|.+-.
T Consensus       345 ~sVlvhcsdGwDrT~qV~SLaQ  366 (573)
T KOG1089|consen  345 ASVLVHCSDGWDRTCQVSSLAQ  366 (573)
T ss_pred             CeEEEEccCCcchhHHHHHHHH
Confidence            5999999999999988777544


No 93 
>PF02061 Lambda_CIII:  Lambda Phage CIII;  InterPro: IPR013056  Bacteriophage lambda regulatory protein CIII is a small protein that plays a role in stabilising the CII transcriptional activator, via a mechanism that is not yet fully understood [, ]. Stabilised CII activates CI, the gene for the repressor protein that prevents transcription of proteins required for lytic development. The central portion of the protein is well conserved and is both necessary and sufficient for the activity of the protein []. Comparative analysis of the CIII sequence in lambda, Bacteriophage HK022 and the lambdoid Enterobacteria phage P22 has led to the suggestion that this central region assumes an amphipathic alpha-helical structure []. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=39.98  E-value=34  Score=23.77  Aligned_cols=24  Identities=25%  Similarity=0.643  Sum_probs=20.5

Q ss_pred             EEEEeeeccCCCCCChHHHHHHHH
Q psy15394        240 HYQFTAWLDYGVPESALSMLEFLA  263 (523)
Q Consensus       240 h~~y~~Wpd~gvP~~~~~ll~fi~  263 (523)
                      +|++.+||--|+|.-.++||+-|.
T Consensus         2 ~~~~AG~~~~G~~ql~ESLLdrIt   25 (45)
T PF02061_consen    2 QYAIAGWPRMGCPQLSESLLDRIT   25 (45)
T ss_pred             eeeecCccccCCchhhHHHHHHHH
Confidence            688999999999987788887764


No 94 
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=38.53  E-value=28  Score=28.72  Aligned_cols=19  Identities=21%  Similarity=0.551  Sum_probs=14.1

Q ss_pred             CCCCEEEEcCCCCchhhHHH
Q psy15394        285 RGPPIIVHCSAGIGRTGTLC  304 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGtfi  304 (523)
                      ...||||+|..| +|+...+
T Consensus        60 ~~~~ivvyC~~G-~rs~~a~   78 (101)
T cd01518          60 KGKKVLMYCTGG-IRCEKAS   78 (101)
T ss_pred             CCCEEEEECCCc-hhHHHHH
Confidence            456999999877 6776543


No 95 
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.25  E-value=1.1e+02  Score=26.77  Aligned_cols=12  Identities=25%  Similarity=0.761  Sum_probs=10.2

Q ss_pred             CCCEEEEcCCCC
Q psy15394        286 GPPIIVHCSAGI  297 (523)
Q Consensus       286 ~~PivVHCsaGv  297 (523)
                      .+||+.||..|.
T Consensus        87 egPVlayCrsGt   98 (130)
T COG3453          87 EGPVLAYCRSGT   98 (130)
T ss_pred             CCCEEeeecCCc
Confidence            479999998776


No 96 
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=37.65  E-value=32  Score=28.22  Aligned_cols=17  Identities=12%  Similarity=0.155  Sum_probs=12.8

Q ss_pred             CCCCEEEEcCCCCchhhH
Q psy15394        285 RGPPIIVHCSAGIGRTGT  302 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGt  302 (523)
                      ...||||+|..|. |+..
T Consensus        60 ~~~~ivv~C~~G~-rs~~   76 (100)
T cd01523          60 DDQEVTVICAKEG-SSQF   76 (100)
T ss_pred             CCCeEEEEcCCCC-cHHH
Confidence            3569999999884 6644


No 97 
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=28.70  E-value=55  Score=32.81  Aligned_cols=23  Identities=26%  Similarity=0.499  Sum_probs=15.7

Q ss_pred             CCCCEEEEcCCCCchhhHHHHHH
Q psy15394        285 RGPPIIVHCSAGIGRTGTLCTLD  307 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGtfiaid  307 (523)
                      ...|||++|..|+--+.++.++.
T Consensus       230 ~~~~ii~yC~~G~~A~~~~~~l~  252 (281)
T PRK11493        230 FDRPIIASCGSGVTAAVVVLALA  252 (281)
T ss_pred             CCCCEEEECCcHHHHHHHHHHHH
Confidence            45699999998875555544443


No 98 
>PLN02160 thiosulfate sulfurtransferase
Probab=27.92  E-value=55  Score=28.99  Aligned_cols=18  Identities=28%  Similarity=0.512  Sum_probs=13.4

Q ss_pred             CCCCEEEEcCCCCchhhHH
Q psy15394        285 RGPPIIVHCSAGIGRTGTL  303 (523)
Q Consensus       285 ~~~PivVHCsaGvGRTGtf  303 (523)
                      ...||+|+|..| +|+..-
T Consensus        80 ~~~~IivyC~sG-~RS~~A   97 (136)
T PLN02160         80 PADDILVGCQSG-ARSLKA   97 (136)
T ss_pred             CCCcEEEECCCc-HHHHHH
Confidence            346999999988 576544


No 99 
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=25.51  E-value=69  Score=26.71  Aligned_cols=14  Identities=36%  Similarity=0.859  Sum_probs=11.5

Q ss_pred             CCCEEEEcCCCCchh
Q psy15394        286 GPPIIVHCSAGIGRT  300 (523)
Q Consensus       286 ~~PivVHCsaGvGRT  300 (523)
                      ..||+|+|..|. |+
T Consensus        66 ~~~ivv~C~~G~-rs   79 (109)
T cd01533          66 RTPIVVNCAGRT-RS   79 (109)
T ss_pred             CCeEEEECCCCc-hH
Confidence            469999999886 66


No 100
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=23.70  E-value=60  Score=26.73  Aligned_cols=16  Identities=38%  Similarity=0.939  Sum_probs=12.9

Q ss_pred             CCCCeEEecCCCCCccc
Q psy15394        432 RGPPIIVHCSAGIGRTG  448 (523)
Q Consensus       432 ~~~pivVHCs~G~gRtg  448 (523)
                      ...|++|+|..|. |++
T Consensus        60 ~~~~ivv~C~~G~-rS~   75 (110)
T COG0607          60 DDDPIVVYCASGV-RSA   75 (110)
T ss_pred             CCCeEEEEeCCCC-ChH
Confidence            4579999999987 664


No 101
>KOG1147|consensus
Probab=21.21  E-value=22  Score=38.67  Aligned_cols=28  Identities=39%  Similarity=0.712  Sum_probs=24.5

Q ss_pred             ceeecCCCCCCCHHHHHHHHHhcCCcEE
Q psy15394        149 AFISTQGPMQNTVEDFWRMVWEQQTLVI  176 (523)
Q Consensus       149 ~yIatQ~Pl~~T~~dFW~MVwe~~v~~I  176 (523)
                      .||++|||..+++.-=|.-||.-+-.+|
T Consensus       476 qfIl~QG~Sk~v~~meWdkiWAfNKKvI  503 (712)
T KOG1147|consen  476 QFILAQGPSKNVVTMEWDKIWAFNKKVI  503 (712)
T ss_pred             HHHHHhCCccceeeeehHhhhhhccccc
Confidence            5999999999999999999998775554


Done!