RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15394
(523 letters)
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 472 bits (1218), Expect = e-166
Identities = 142/300 (47%), Positives = 202/300 (67%)
Query: 62 QGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTR 121
++I E V+ V ++ + G+ EYE + + P G+F + NL KNRY DV D TR
Sbjct: 9 HAMTIQELVDYVNARQKQGIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTR 68
Query: 122 VLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTR 181
V L+++ +DYINA+F+DGYKQKNA+I TQGP++NT DFW MVWEQ+ LVI+MTTR
Sbjct: 69 VKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTR 128
Query: 182 VIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHY 241
E GR KC QYWP + +++ G VT V + Y ++L + NT+ + R V H+
Sbjct: 129 FEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHF 188
Query: 242 QFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTG 301
QF +W DYGVP SA S+++FL R+ Q+ ++++G G PPI+VHCSAGIGRTG
Sbjct: 189 QFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTG 248
Query: 302 TLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISA 361
T C+LDIC+++LE+ GT++V TV R+R+QRA SIQ +QY FC+ A++E+A G++SA
Sbjct: 249 TFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKEGMVSA 308
Score = 161 bits (410), Expect = 1e-45
Identities = 53/107 (49%), Positives = 78/107 (72%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
A S+++FL R Q+ ++++G G PPI+VHCSAGIGRTGT C+LDIC+++LE
Sbjct: 202 AASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQLE 261
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISA 508
+ GT++V TV R+R+QRA SIQ +QY FC+ A++E+A G++SA
Sbjct: 262 ELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKEGMVSA 308
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 440 bits (1133), Expect = e-153
Identities = 104/305 (34%), Positives = 157/305 (51%), Gaps = 9/305 (2%)
Query: 60 SSQGLSIAEFVEAVRSKGRSG-LCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYD 118
+ + + E ++ K G + EYE K +G F A EN ++R +V+ Y+
Sbjct: 25 DATRVPMDERFRTLKKKLEEGMVFTEYEQIPKKKANGIFSTAALPENAERSRIREVVPYE 84
Query: 119 HTRVLLSQQDDVPGSDYINANFVDGY--KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVI 176
RV L + + YINA+ + + +I+TQGP+ +T DFW+MVWEQ VI
Sbjct: 85 ENRVELIPTKE-NNTGYINASHIKVVVGGAEWHYIATQGPLPHTCHDFWQMVWEQGVNVI 143
Query: 177 IMTTRVIERGRNKCAQYWP--GTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLE 234
M T E GR K +YWP G++ + T+G F VTT+ T S Y + L + + + +
Sbjct: 144 AMVTAEEEGGRTKSHRYWPKLGSKHSSATYGKFKVTTKFRTDSVCYATTGLKVKHLLSGQ 203
Query: 235 TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCS 294
R V H Q+T W D+G PE L +L + + + + L T R PPI+VHCS
Sbjct: 204 ERTVWHLQYTDWPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTK---NRHPPIVVHCS 260
Query: 295 AGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 354
AG+GRTG L ++ I LE + V+V ++ +R QR IQ QY F + LI++
Sbjct: 261 AGVGRTGVLILSELMIYCLEHNEKVEVPMMLRLLREQRMFMIQTIAQYKFVYQVLIQFLQ 320
Query: 355 SRGLI 359
+ LI
Sbjct: 321 NSRLI 325
Score = 151 bits (383), Expect = 1e-41
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
L +L + + + + L T R PPI+VHCSAG+GRTG L ++ I LE
Sbjct: 224 VQGFLSYLEEIQSVRRHTNSMLEGTK---NRHPPIVVHCSAGVGRTGVLILSELMIYCLE 280
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLI 506
+ V+V ++ +R QR IQ QY F + LI++ + LI
Sbjct: 281 HNEKVEVPMMLRLLREQRMFMIQTIAQYKFVYQVLIQFLQNSRLI 325
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 423 bits (1090), Expect = e-147
Identities = 107/291 (36%), Positives = 163/291 (56%), Gaps = 17/291 (5%)
Query: 65 SIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLL 124
+ + + ++ G EYE + S++ AK EN KNRY ++++YDH+RV L
Sbjct: 8 DLLQHITQMKRGQGYGFKEEYEALP-EGQTASWDTAKEDENRNKNRYGNIISYDHSRVRL 66
Query: 125 SQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIE 184
D P SDYINAN++DGY + +I+TQGPMQ TV+DFWRM+W++ + I+M T ++E
Sbjct: 67 LVLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVE 126
Query: 185 RGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFT 244
GR KC +YWP + T+ +GD VT +YV+ + T+ E R + + FT
Sbjct: 127 VGRVKCVRYWP--DDTE-VYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIRELRLFHFT 183
Query: 245 AWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLC 304
+W D+GVP A +L F+ + + P PI+VHCSAG GRTG
Sbjct: 184 SWPDHGVPCYATGLLGFVRQVKFLN-------------PPEAGPIVVHCSAGAGRTGCFI 230
Query: 305 TLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 355
+D + E+ G VD+ V+ +R+QR + +Q +QY+F H A++E L
Sbjct: 231 AIDTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDAILEACLC 281
Score = 137 bits (347), Expect = 6e-37
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
A +L F+ + ++ P PI+VHCSAG GRTG +D + E
Sbjct: 194 ATGLLGFVRQVKFLN-------------PPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAE 240
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 502
+ G VD+ V+ +R+QR + +Q +QY+F H A++E L
Sbjct: 241 NEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDAILEACLC 281
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 424 bits (1091), Expect = e-147
Identities = 105/320 (32%), Positives = 165/320 (51%), Gaps = 17/320 (5%)
Query: 41 KRVRFSDDDSLHADPTGTSSSQGLSIAEFVEAVR---SKGRSGLCLEYEGFKIKPPDGSF 97
K+ + + ++ + S+ + + F + + G EYE K+
Sbjct: 3 KKRKDAKNNEVSFSQIKPKKSKLIRVENFEAYFKKQQADSNCGFAEEYEDLKLIGISLPK 62
Query: 98 EVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPM 157
A+ EN KNRY++VL YD +RV LS Q DYINAN++ GY K FI+TQGP+
Sbjct: 63 YAAEIAENRGKNRYNNVLPYDISRVKLSVQTH-STDDYINANYMPGYHSKKDFIATQGPL 121
Query: 158 QNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSS 217
NT++DFWRMVWE+ I+M T+ +E+GR KC +YWP + +GD V
Sbjct: 122 PNTLKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWPSKQA--QDYGDITVAMTSEVVL 179
Query: 218 PDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLG 277
P++ + + N ++ E+ + + FT+W D+GVP++ ++ F R
Sbjct: 180 PEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQ------ 233
Query: 278 DTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 337
P PI+VHCSAG+GRTGT +D I ++E+ TVDV G V +R R +Q
Sbjct: 234 -----IPPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQ 288
Query: 338 MRDQYIFCHLALIEYALSRG 357
DQY+F + +++ ++
Sbjct: 289 TEDQYVFLNQCVLDIIRAQK 308
Score = 138 bits (349), Expect = 8e-37
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
++ F R P PI+VHCSAG+GRTGT +D I ++E
Sbjct: 217 TDLLINFRYLVRDYMKQ-----------IPPESPILVHCSAGVGRTGTFIAIDRLIYQIE 265
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRG 504
+ TVDV G V +R R +Q DQY+F + +++ ++
Sbjct: 266 NENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLDIIRAQK 308
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 422 bits (1086), Expect = e-146
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 55 PTGTSSSQGLSIAEFVEAVR---SKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRY 111
P+ L + + E + + E+ P + E A + EN KNRY
Sbjct: 2 PSTNRKYPPLPVDKLEEEINRRMADDNKLFREEFNALPACPIQATCEAASKEENKEKNRY 61
Query: 112 SDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQ 171
++L YDH+RV L+ + VP SDYINA+F++GY++KN FI+ QGP + TV DFWRM+WEQ
Sbjct: 62 VNILPYDHSRVHLTPVEGVPDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQ 121
Query: 172 QTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCN-- 229
T I+M T + ER KCAQYWP +G T+G+ V+ E VT DY + +
Sbjct: 122 NTATIVMVTNLKERKECKCAQYWP-DQGC-WTYGNVRVSVEDVTVLVDYTVRKFCIQQVG 179
Query: 230 --TKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGP 287
T R++ + FT+W D+GVP + + ML+FL K +
Sbjct: 180 DVTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNP-------------QYAG 226
Query: 288 PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHL 347
I+VHCSAG+GRTGT +D + + VDV G V RIR+QR +Q QY+F +
Sbjct: 227 AIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQ 286
Query: 348 ALIEYALS 355
AL+E+ L
Sbjct: 287 ALLEHYLY 294
Score = 133 bits (338), Expect = 1e-35
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+ ML+FL K + I+VHCSAG+GRTGT +D + +
Sbjct: 207 PIGMLKFLKKVKACNP-------------QYAGAIVVHCSAGVGRTGTFVVIDAMLDMMH 253
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 502
VDV G V RIR+QR +Q QY+F + AL+E+ L
Sbjct: 254 SERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLY 294
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 419 bits (1079), Expect = e-145
Identities = 108/306 (35%), Positives = 154/306 (50%), Gaps = 20/306 (6%)
Query: 55 PTGTS-SSQGLSIAEFVEAVR---SKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNR 110
P G+ +S+ + I F E R + E+E K D A N KNR
Sbjct: 16 PRGSHMASRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNR 75
Query: 111 YSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWE 170
++++L YDH+R L DD GSDYINAN+V G+ FI TQGP+ +T +DFWRM WE
Sbjct: 76 FTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWE 135
Query: 171 QQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNT 230
+ I+M TR E+GR KC QYWP + + +GD V + D+V++ LC
Sbjct: 136 SNSRAIVMLTRCFEKGREKCDQYWP-NDTVPVFYGDIKVQILNDSHYADWVMTEFMLCRG 194
Query: 231 KTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPII 290
E R++ H+ FT W D+GVP +++ F+ R PI+
Sbjct: 195 S--EQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIG-------------AEQRPIV 239
Query: 291 VHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALI 350
VHCSAG+GR+GT TLD + ++ S VD+ G V +R +R +Q QYI H L+
Sbjct: 240 VHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL 299
Query: 351 EYALSR 356
+
Sbjct: 300 AVLEGK 305
Score = 135 bits (343), Expect = 3e-36
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 13/102 (12%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+++ F+ R PI+VHCSAG+GR+GT TLD + ++
Sbjct: 217 PQTLVRFVRAFRDRIG-------------AEQRPIVVHCSAGVGRSGTFITLDRILQQIN 263
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
S VD+ G V +R +R +Q QYI H L+ +
Sbjct: 264 TSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGK 305
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 417 bits (1073), Expect = e-145
Identities = 100/295 (33%), Positives = 157/295 (53%), Gaps = 18/295 (6%)
Query: 65 SIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLL 124
+++ L EYE K + S ++A EN KNRY+++L YD TRV L
Sbjct: 13 QFEGHFMKLQADSNYLLSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKL 72
Query: 125 SQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIE 184
S GSDYINA+++ G + +I TQGP+ T +DFW+MVWEQ I+M T+ +E
Sbjct: 73 S-----GGSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVE 127
Query: 185 RGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTL-ETRMVAHYQF 243
+GR KC YWP + + + +GD ++ + P++ + +C + L R++ H+ +
Sbjct: 128 KGRVKCDHYWPADQDS-LYYGDLILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHY 186
Query: 244 TAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTL 303
T W D+GVPE+ S+++F+ R P P +VHCSAG+GRTGT
Sbjct: 187 TVWPDHGVPETTQSLIQFVRTVRDYINR-----------SPGAGPTVVHCSAGVGRTGTF 235
Query: 304 CTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGL 358
LD + +L+ +VD+ G V +R R H +Q QY++ H + + +R L
Sbjct: 236 IALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRARKL 290
Score = 138 bits (351), Expect = 2e-37
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
S+++F+ R D P P +VHCSAG+GRTGT LD + +L+
Sbjct: 198 TQSLIQFVRTVR-----------DYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLD 246
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGL 505
+VD+ G V +R R H +Q QY++ H + + +R L
Sbjct: 247 SKDSVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRARKL 290
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 417 bits (1073), Expect = e-144
Identities = 102/290 (35%), Positives = 147/290 (50%), Gaps = 19/290 (6%)
Query: 67 AEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQ 126
EF E + Y + + D VAK EN +NRY DV YDH+RV L
Sbjct: 7 REFEEL---DTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQN 63
Query: 127 QDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERG 186
+DYINA+ VD + + ++I TQGP+ NT FW MVW+Q+T ++M R++E+
Sbjct: 64 ----AENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKE 119
Query: 187 RNKCAQYWPGTEGTK-MTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTA 245
KCAQYWP + F V Y + L L N + ETR ++H+ +T
Sbjct: 120 SVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTT 179
Query: 246 WLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCT 305
W D+GVPES S L FL K R + + +P P ++HCSAGIGR+GT
Sbjct: 180 WPDFGVPESPASFLNFLFKVRESGSL-----------NPDHGPAVIHCSAGIGRSGTFSL 228
Query: 306 LDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 355
+D C+ +E ++++ + +R R IQ DQ F ++A+IE A
Sbjct: 229 VDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKC 278
Score = 140 bits (356), Expect = 4e-38
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
S L FL K R + + +P P ++HCSAGIGR+GT +D C+ +E
Sbjct: 189 PASFLNFLFKVRESGSL-----------NPDHGPAVIHCSAGIGRSGTFSLVDTCLVLME 237
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 502
++++ + +R R IQ DQ F ++A+IE A
Sbjct: 238 KGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKC 278
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 416 bits (1071), Expect = e-144
Identities = 96/294 (32%), Positives = 147/294 (50%), Gaps = 18/294 (6%)
Query: 65 SIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLL 124
+++ + L++E K+ D A N KNRY+++L YD +RV L
Sbjct: 9 DFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRL 68
Query: 125 SQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIE 184
++ G+DYINAN++ GY +I+TQGP+ T DFW+MV +Q++ +I+M T+ E
Sbjct: 69 VSMNEEEGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNE 128
Query: 185 RGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFT 244
+ R KC YWP TE + +GD V D+ + E + V H+ +T
Sbjct: 129 KRRVKCDHYWPFTEEP-IAYGDITVEMISEEEQDDWACRHFRINYAD--EMQDVMHFNYT 185
Query: 245 AWLDYGVP--ESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGT 302
AW D+GVP +A S+L+F+ R P+I+HCSAG+GRTGT
Sbjct: 186 AWPDHGVPTANAAESILQFVHMVRQQAT-------------KSKGPMIIHCSAGVGRTGT 232
Query: 303 LCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 356
LD + + D VD+ G V +RS R +Q +QYIF H + + +
Sbjct: 233 FIALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIHQCVQLMWMKK 286
Score = 131 bits (333), Expect = 6e-35
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 401 AALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRL 460
AA S+L+F+ R P+I+HCSAG+GRTGT LD + +
Sbjct: 197 AAESILQFVHMVRQQAT-------------KSKGPMIIHCSAGVGRTGTFIALDRLLQHI 243
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
D VD+ G V +RS R +Q +QYIF H + + +
Sbjct: 244 RDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIHQCVQLMWMKK 286
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 416 bits (1071), Expect = e-144
Identities = 102/285 (35%), Positives = 148/285 (51%), Gaps = 20/285 (7%)
Query: 74 RSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGS 133
+ Y+ + + D VAK +N +NRY DV +DH+R+ L Q +
Sbjct: 15 QIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ----EDN 70
Query: 134 DYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQY 193
DYINA+ + + + ++I TQGP+ NT FW MVWEQ++ ++M RV+E+G KCAQY
Sbjct: 71 DYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQY 130
Query: 194 WP--GTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGV 251
WP + + +T Y + L L N T ETR + H+ +T W D+GV
Sbjct: 131 WPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 190
Query: 252 PESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDIC-- 309
PES S L FL K R + + P P++VHCSAGIGR+GT C D C
Sbjct: 191 PESPASFLNFLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLL 239
Query: 310 -ISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+ + +D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 240 LMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
Score = 135 bits (341), Expect = 5e-36
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDIC---IS 458
S L FL K R + + P P++VHCSAGIGR+GT C D C +
Sbjct: 194 PASFLNFLFKVRESGSL-----------SPEHGPVVVHCSAGIGRSGTFCLADTCLLLMD 242
Query: 459 RLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+ +D +VD++ + +R R IQ DQ F +LA+IE A
Sbjct: 243 KRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGA 284
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 412 bits (1061), Expect = e-143
Identities = 102/296 (34%), Positives = 151/296 (51%), Gaps = 25/296 (8%)
Query: 65 SIAEFVEAVRSKGRSG-LCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVL 123
++ + ++ SG + +++E K P + AK +NL KNRY DVL YD TRVL
Sbjct: 3 TLEGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVL 62
Query: 124 LSQQDDVPGSDYINANFVD----GYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMT 179
L DYINA++V+ N +I+TQGP+ +T FW++VW+Q+ +I+M
Sbjct: 63 LQ-----GNEDYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVML 117
Query: 180 TRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVA 239
T + ERGR KC QYWP M HG F + + + YV + + NT+T E V
Sbjct: 118 TTLTERGRTKCHQYWP-DPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVT 176
Query: 240 HYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGR 299
H Q+ AW D+GVP+ + LEF+ R P++VHCSAGIGR
Sbjct: 177 HLQYVAWPDHGVPDDSSDFLEFVNYVRSL--------------RVDSEPVLVHCSAGIGR 222
Query: 300 TGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 355
TG L T++ + E + + V+++R QRA +Q QY F A++
Sbjct: 223 TGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSSQYKFVCEAILRVYEE 278
Score = 136 bits (344), Expect = 1e-36
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+ LEF+ R + P++VHCSAGIGRTG L T++ + E
Sbjct: 192 SSDFLEFVNYVR--------------SLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTE 237
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 502
+ + V+++R QRA +Q QY F A++
Sbjct: 238 RNLPIYPLDIVRKMRDQRAMMVQTSSQYKFVCEAILRVYEE 278
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 407 bits (1049), Expect = e-142
Identities = 95/271 (35%), Positives = 148/271 (54%), Gaps = 20/271 (7%)
Query: 99 VAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQ 158
N+ KNR ++ Y+ RV++ + +DY+NA+F+DGY+QK+++I++QGP+
Sbjct: 3 TGNLPANMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQGPLL 62
Query: 159 NTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSP 218
+T+EDFWRM+WE ++ I+M T + ERG+ KCAQYWP +++GD V +
Sbjct: 63 HTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWP--SDGLVSYGDITVELKKEEECE 120
Query: 219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
Y + L + NT+ ++R + + F W + G+P M+ +A + Q
Sbjct: 121 SYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQ-------- 172
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQM 338
PI VHCSAG GRTGT C L + R++ G +DV TVK +R QR H +Q
Sbjct: 173 ----QSGNHPITVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLRLQRPHMVQT 228
Query: 339 RDQYIFCHLALIEYALSRGLISAKPDLSGFQ 369
+QY FC+ + EY I A D + F+
Sbjct: 229 LEQYEFCYKVVQEY------IDAFSDYANFK 253
Score = 137 bits (347), Expect = 3e-37
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 18/115 (15%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
M+ +A + Q PI VHCSAG GRTGT C L + R++
Sbjct: 157 GKGMINIIAAVQKQQQ------------QSGNHPITVHCSAGAGRTGTFCALSTVLERVK 204
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAKPDLSGFQ 516
G +DV TVK +R QR H +Q +QY FC+ + EY I A D + F+
Sbjct: 205 AEGILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVVQEY------IDAFSDYANFK 253
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 408 bits (1050), Expect = e-141
Identities = 104/305 (34%), Positives = 146/305 (47%), Gaps = 29/305 (9%)
Query: 65 SIAEFVEAVRSK---GRSGLCLEYEGFK------IKPPDGSFEVAKRRENLFKNRYSDVL 115
S F+E + ++ + L E+ + S R EN+ KNRY DVL
Sbjct: 11 SARSFLERLEARGGREGAVLAGEFSDIQACSAAWKADGVCSTVAGSRPENVRKNRYKDVL 70
Query: 116 AYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLV 175
YD TRV+LS + SDYIN NF+ G A+I+TQGP+ +T+ DFWR+VWE V
Sbjct: 71 PYDQTRVILSLLQEEGHSDYINGNFIRGVDGSLAYIATQGPLPHTLLDFWRLVWEFGVKV 130
Query: 176 IIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVT-SSPDYVLSSLTLCNTKTLE 234
I+M R IE GR +C +YW E + G F +T + D +L +L + K E
Sbjct: 131 ILMACREIENGRKRCERYWA-QEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQK--E 187
Query: 235 TRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCS 294
+R V Q+ +W D GVP S ML + +AR Q P+ VHCS
Sbjct: 188 SRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQG-------------SGPEPLCVHCS 234
Query: 295 AGIGRTGTLCTLDICISRLEDSG---TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIE 351
AG GRTG LCT+D L + V ++R QR ++Q +QY F + + +
Sbjct: 235 AGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQ 294
Query: 352 YALSR 356
S
Sbjct: 295 MFCST 299
Score = 129 bits (327), Expect = 5e-34
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 16/105 (15%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
ML + +AR Q P+ VHCSAG GRTG LCT+D L
Sbjct: 208 PDHMLAMVEEARRLQG-------------SGPEPLCVHCSAGCGRTGVLCTVDYVRQLLL 254
Query: 462 DSG---TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
+ V ++R QR ++Q +QY F + + + S
Sbjct: 255 TQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCST 299
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 419 bits (1079), Expect = e-141
Identities = 114/353 (32%), Positives = 163/353 (46%), Gaps = 14/353 (3%)
Query: 65 SIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLL 124
+ E + + E++ + A++ N KNRY D+L YD+ RV L
Sbjct: 14 ILLETYKRKIADEGRPFLAEFQSIPRVFSKFPIKEARKPFNQNKNRYVDILPYDYNRVEL 73
Query: 125 SQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIE 184
S+ + GS+YINA+++DG+K+ +I+ QGP TV+DFWRM+WEQ+ VI+M TR E
Sbjct: 74 SEINGDAGSNYINASYIDGFKEPRKYIAAQGPRDETVDDFWRMIWEQKATVIVMVTRCEE 133
Query: 185 RGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTK-TLETRMVAHYQF 243
RNKCA+YWP E GD +V PDY++ L + N K R V H QF
Sbjct: 134 GNRNKCAEYWPSMEEGTRAFGDVVVKINQHKRCPDYIIQKLNIVNKKEKATGREVTHIQF 193
Query: 244 TAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTL 303
T+W D+GVPE +L+ + PI+VH SAG+GRTGT
Sbjct: 194 TSWPDHGVPEDPHLLLKLRRRVNAFSN-------------FFSGPIVVHSSAGVGRTGTY 240
Query: 304 CTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAKP 363
+D + LE VDV G V ++R QR +Q+ QYI H AL+EY
Sbjct: 241 IGIDAMLEGLEAENKVDVYGYVVKLRRQRCLMVQVEAQYILIHQALVEYNQFGETEVNLS 300
Query: 364 DLSGFQTSCATSRPGGHLGRAPAGAPNHRPLLGRDRAAALSMLEFLAKARYTQ 416
+L + + P A + E +K R +
Sbjct: 301 ELHPYLHNMKKRDPPSEPSPLEAEFQRLPSYRSWRTQHIGNQEENKSKNRNSN 353
Score = 374 bits (961), Expect = e-123
Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 25/298 (8%)
Query: 78 RSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQ---------- 127
S L E++ + + + EN KNR S+V+ YD+ RV L +
Sbjct: 318 PSPLEAEFQRLPSYRSWRTQHIGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEHD 377
Query: 128 ---------DDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIM 178
D S YINA+F+ Y + I+ QGP++ T+ DFW+M+++++ VI+M
Sbjct: 378 SDESSDDDSDSEEPSKYINASFIMSYWKPEVMIAAQGPLKETIGDFWQMIFQRKVKVIVM 437
Query: 179 TTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMV 238
T + + CAQYW EG T+GD V + S Y L L ++K ++R V
Sbjct: 438 LTELKHGDQEICAQYWG--EGK-QTYGDIEVDLKDTDKSSTYTLRVFELRHSKRKDSRTV 494
Query: 239 AHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIG 298
YQ+T W +P ++ + + + G+ H + P+++HC G
Sbjct: 495 YQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNK---HHKSTPLLIHCRDGSQ 551
Query: 299 RTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 356
+TG C L + E VD+ VK +R R + +QY F + + ++
Sbjct: 552 QTGIFCALLNLLESAETEEVVDIFQVVKALRKARLGMVSTFEQYQFLYDVIASTYPAQ 609
Score = 131 bits (330), Expect = 1e-32
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS 463
++ + + + G+ H + P+++HC G +TG C L + E
Sbjct: 513 ELISMIQVVKQKLPQKNSSEGNK---HHKSTPLLIHCRDGSQQTGIFCALLNLLESAETE 569
Query: 464 GTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
VD+ VK +R R + +QY F + + ++
Sbjct: 570 EVVDIFQVVKALRKARLGMVSTFEQYQFLYDVIASTYPAQ 609
Score = 125 bits (316), Expect = 6e-31
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+L+ + PI+VH SAG+GRTGT +D + LE
Sbjct: 205 PHLLLKLRRRVNAFSN-------------FFSGPIVVHSSAGVGRTGTYIGIDAMLEGLE 251
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 501
VDV G V ++R QR +Q+ QYI H AL+EY
Sbjct: 252 AENKVDVYGYVVKLRRQRCLMVQVEAQYILIHQALVEYNQ 291
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 408 bits (1051), Expect = e-141
Identities = 122/318 (38%), Positives = 181/318 (56%), Gaps = 33/318 (10%)
Query: 57 GTSSSQGLSIAEFVEAV---RSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRY 111
GT + S+ +FV+ + S + G ++E + D + E + EN KNRY
Sbjct: 14 GTENLYFQSMKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRY 73
Query: 112 SDVLAYDHTRVLLSQ--QDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVW 169
++LAYDH+RV L D SDYINAN+VDGY + A+I+TQGP+++T EDFWRM+W
Sbjct: 74 INILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIW 133
Query: 170 EQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCN 229
EQ T +I+M T ++E+GR KC QYWP TE ++ +G+ +VT + Y + ++ N
Sbjct: 134 EQNTGIIVMITNLVEKGRRKCDQYWP-TENSE-EYGNIIVTLKSTKIHACYTVRRFSIRN 191
Query: 230 TKTL-----------ETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
TK R+V Y +T W D GVPE AL +L F+ ++ +
Sbjct: 192 TKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR--------- 242
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQM 338
P P++VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q
Sbjct: 243 ----MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQT 298
Query: 339 RDQYIFCHLALIEYALSR 356
+QYIF H AL+E L +
Sbjct: 299 EEQYIFIHDALLEAILGK 316
Score = 134 bits (340), Expect = 1e-35
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 13/102 (12%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
AL +L F+ ++ + P P++VHCSAG+GRTGT +D + +++
Sbjct: 228 ALPVLTFVRRSSAAR-------------MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIK 274
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
D TV+V G +K IR+QR + +Q +QYIF H AL+E L +
Sbjct: 275 DKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGK 316
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 406 bits (1045), Expect = e-140
Identities = 95/292 (32%), Positives = 150/292 (51%), Gaps = 23/292 (7%)
Query: 68 EFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQ 127
++ + +++ K P + AK +N+ KNRY D+ YD TRV+L
Sbjct: 34 SMIQLAEGLITGTVLTQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVILK-- 91
Query: 128 DDVPGSDYINANFVD----GYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVI 183
DYINAN+++ N +I+ QGP+ +T DFW+M WEQ + +++M T +
Sbjct: 92 ---GNEDYINANYINMEIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQV 148
Query: 184 ERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQF 243
ERGR KC QYWP G+ ++G + VT + Y+ +TL N + E+R + Q+
Sbjct: 149 ERGRVKCHQYWPEPTGS-SSYGCYQVTCHSEEGNTAYIFRKMTLFNQEKNESRPLTQIQY 207
Query: 244 TAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTL 303
AW D+GVP+ + L+F+ R+ +A + P++VHCSAGIGRTG L
Sbjct: 208 IAWPDHGVPDDSSDFLDFVCHVRNKRA-------------GKEEPVVVHCSAGIGRTGVL 254
Query: 304 CTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 355
T++ + +E + V V+ +R QRA IQ QY F A+++
Sbjct: 255 ITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEE 306
Score = 133 bits (337), Expect = 2e-35
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+ L+F+ R +A + P++VHCSAGIGRTG L T++ + +E
Sbjct: 219 SSDFLDFVCHVRNKRA-------------GKEEPVVVHCSAGIGRTGVLITMETAMCLIE 265
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 502
+ V V+ +R QRA IQ QY F A+++
Sbjct: 266 CNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEE 306
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 406 bits (1045), Expect = e-140
Identities = 102/328 (31%), Positives = 157/328 (47%), Gaps = 28/328 (8%)
Query: 37 EDAVKRVRFSDDDSLHA----DPTGTSSSQGLSIAEFVEAVRSKGRSGLCL-EYEGFKIK 91
ED+ K F +D L + G ++ + +R G+ E E +
Sbjct: 2 EDSDKDHSFLTNDELAVLPVVKVLPSGKYTGANLKSVIRVLRGLLDQGIPSKELENLQEL 61
Query: 92 PPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDG--YKQKNA 149
P + + +EN KNRY ++L YD TRV L YINA+F+ K++
Sbjct: 62 KPLDQCLIGQTKENRRKNRYKNILPYDATRVPLG-----DEGGYINASFIKIPVGKEEFV 116
Query: 150 FISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEG-TKMTHGDFL 208
+I+ QGP+ TV DFW+M+WEQ++ VI M T+ +E + KC +YWP G T M
Sbjct: 117 YIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRYWPNILGKTTMVSNRLR 176
Query: 209 VTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHT 268
+ + +V+ ++TL + +T E R ++H FTAW D+ P +L F++ RH
Sbjct: 177 LALVRMQQLKGFVVRAMTLEDIQTREVRHISHLNFTAWPDHDTPSQPDDLLTFISYMRHI 236
Query: 269 QAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRI 328
R PII HCSAGIGR+GTL +D+ + + D+ V+ +
Sbjct: 237 H---------------RSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCM 281
Query: 329 RSQRAHSIQMRDQYIFCHLALIEYALSR 356
R QR +Q DQYIFC+ ++
Sbjct: 282 RLQRHGMVQTEDQYIFCYQVILYVLTRL 309
Score = 131 bits (332), Expect = 1e-34
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+L F++ R+ R PII HCSAGIGR+GTL +D+ + +
Sbjct: 223 PDDLLTFISYMRHIH---------------RSGPIITHCSAGIGRSGTLICIDVVLGLIS 267
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
D+ V+ +R QR +Q DQYIFC+ ++
Sbjct: 268 QDLDFDISDLVRCMRLQRHGMVQTEDQYIFCYQVILYVLTRL 309
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 415 bits (1069), Expect = e-140
Identities = 116/290 (40%), Positives = 168/290 (57%), Gaps = 16/290 (5%)
Query: 67 AEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQ 126
A+ +E +++ EYE ++E + N KNRY++V+AYDH+RV+L+
Sbjct: 6 ADNIERLKANDGLKFSQEYESID-PGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTS 64
Query: 127 QDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERG 186
D VPGSDYINAN++DGY+++NA+I+TQGP+ T+ DFWRMVWEQ+T ++M TR+ E+
Sbjct: 65 IDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKS 124
Query: 187 RNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAW 246
R KC QYWP GT+ T G VT Y + + L + + E R + +QF AW
Sbjct: 125 RVKCDQYWP-ARGTE-TCGLIQVTLLDTVELATYTVRTFALHKSGSSEKRELRQFQFMAW 182
Query: 247 LDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTL 306
D+GVPE +L FL + + P++VHCSAG+GRTG +
Sbjct: 183 PDHGVPEYPTPILAFLRRVKACNP-------------LDAGPMVVHCSAGVGRTGCFIVI 229
Query: 307 DICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 356
D + R++ TVD+ G V +RSQR + +Q DQY+F H AL+E A
Sbjct: 230 DAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCG 279
Score = 383 bits (985), Expect = e-127
Identities = 100/265 (37%), Positives = 147/265 (55%), Gaps = 13/265 (4%)
Query: 88 FKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQK 147
K F A N FKNR +++ Y+ TRV L V GSDYINA+F+DGY+Q+
Sbjct: 315 ASSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQ 374
Query: 148 NAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDF 207
A+I+TQGP+ + EDFWRM+WE + +I+M T++ E GR KC QYWP + F
Sbjct: 375 KAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAER--SARYQYF 432
Query: 208 LVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARH 267
+V + P Y+L + + + ++R + +QFT W + GVP++ ++F+ +
Sbjct: 433 VVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHK 492
Query: 268 TQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKR 327
T+ + PI VHCSAG+GRTG TL I + R+ G VD+ TVK
Sbjct: 493 TKEQ-----------FGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKT 541
Query: 328 IRSQRAHSIQMRDQYIFCHLALIEY 352
+R+QR +Q DQY C+ A +EY
Sbjct: 542 LRTQRPAMVQTEDQYQLCYRAALEY 566
Score = 130 bits (328), Expect = 2e-32
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+L FL + + P++VHCSAG+GRTG +D + R++
Sbjct: 191 PTPILAFLRRVKACNP-------------LDAGPMVVHCSAGVGRTGCFIVIDAMLERMK 237
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
TVD+ G V +RSQR + +Q DQY+F H AL+E A
Sbjct: 238 HEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCG 279
Score = 127 bits (321), Expect = 1e-31
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS 463
++F+ + T+ + PI VHCSAG+GRTG TL I + R+
Sbjct: 482 GFIDFIGQVHKTKEQ-----------FGQDGPITVHCSAGVGRTGVFITLSIVLERMRYE 530
Query: 464 GTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
G VD+ TVK +R+QR +Q DQY C+ A +EY
Sbjct: 531 GVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEY 566
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 404 bits (1040), Expect = e-139
Identities = 94/302 (31%), Positives = 146/302 (48%), Gaps = 26/302 (8%)
Query: 66 IAEFVEAVRSKGRS--GLCLEYEGFK------IKPPDGSFEVAKRRENLFKNRYSDVLAY 117
+ +F++ +SK + E+ K VA++ +N+ KNRY D+L Y
Sbjct: 7 LQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPY 66
Query: 118 DHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVII 177
D++RV LS S YINANF+ G A+I+TQGP+ T+ DFWRM+WE L+I+
Sbjct: 67 DYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIV 126
Query: 178 MTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRM 237
M E G+ KC +YW ++ G F V+ E DY++ +L + ETR
Sbjct: 127 MACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNS--ETRT 184
Query: 238 VAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGI 297
+ + + W D+ VP S +LE + R Q PI +HCSAG
Sbjct: 185 IYQFHYKNWPDHDVPSSIDPILELIWDVRCYQE-------------DDSVPICIHCSAGC 231
Query: 298 GRTGTLCTLDICISRLEDS---GTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 354
GRTG +C +D L+D V ++ +R+QR +Q ++QY + A++E
Sbjct: 232 GRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLELFK 291
Query: 355 SR 356
+
Sbjct: 292 RQ 293
Score = 128 bits (323), Expect = 2e-33
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+LE + R Q PI +HCSAG GRTG +C +D L+
Sbjct: 202 IDPILELIWDVRCYQE-------------DDSVPICIHCSAGCGRTGVICAIDYTWMLLK 248
Query: 462 DS---GTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
D V ++ +R+QR +Q ++QY + A++E +
Sbjct: 249 DGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLELFKRQ 293
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 401 bits (1032), Expect = e-138
Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 22/298 (7%)
Query: 65 SIAEFVEAV---RSKGRSGLCLEYEGFK-IKPPDGSFEVAKRRENLFKNRYSDVLAYDHT 120
S + A + R L E++ + + A+ N+ KNR+ D L YDH
Sbjct: 12 STGHMILAYMEDHLRNRDRLAKEWQALCAYQAEPNTCATAQGEGNIKKNRHPDFLPYDHA 71
Query: 121 RVLLSQQDDVPGSDYINANFV-DGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMT 179
R+ L + SDYINA+ + + + A+I+TQGP+ +T+ DFW+MVWE VI+M
Sbjct: 72 RIKLKVESSPSRSDYINASPIIEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVML 131
Query: 180 TRVIERGRNKCAQYWPGTEGTKMTHGDFLVT-TECVTSSPDYVLSSLTLCNTKTLETRMV 238
T ++E G +C +YWP EG + + V D+++ S L N +T ETR +
Sbjct: 132 TPLVEDGVKQCDRYWP-DEGAS-LYHVYEVNLVSEHIWCEDFLVRSFYLKNVQTQETRTL 189
Query: 239 AHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIG 298
+ F +W G P S +L+F K R PIIVHCS G G
Sbjct: 190 TQFHFLSWPAEGTPASTRPLLDFRRKVNKCY-------------RGRSCPIIVHCSDGAG 236
Query: 299 RTGTLCTLDICISRL-EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 355
RTGT +D+ ++R+ + +D+ T++ +R QR ++ +DQ+ F A+ E +
Sbjct: 237 RTGTYILIDMVLNRMAKGVKEIDIAATLEHVRDQRPGLVRSKDQFEFALTAVAEEVNA 294
Score = 130 bits (328), Expect = 4e-34
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRL- 460
+L+F K R PIIVHCS G GRTGT +D+ ++R+
Sbjct: 206 TRPLLDFRRKVNKCY-------------RGRSCPIIVHCSDGAGRTGTYILIDMVLNRMA 252
Query: 461 EDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 502
+ +D+ T++ +R QR ++ +DQ+ F A+ E +
Sbjct: 253 KGVKEIDIAATLEHVRDQRPGLVRSKDQFEFALTAVAEEVNA 294
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 406 bits (1045), Expect = e-136
Identities = 116/296 (39%), Positives = 160/296 (54%), Gaps = 21/296 (7%)
Query: 65 SIAEFVEAVRSK---GRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTR 121
+ E +R + E+ G+FE+A + EN KNRY ++L DH+R
Sbjct: 11 PVEHLEEEIRIRSADDCKQFREEFNSLPSGHIQGTFELANKEENREKNRYPNILPNDHSR 70
Query: 122 VLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTR 181
V+LSQ D +P SDYINA+++DGYK+KN FI+ QGP Q TV DFWRMVWEQ++ I+M T
Sbjct: 71 VILSQLDGIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQKSATIVMLTN 130
Query: 182 VIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTK---TLETRMV 238
+ ER KC QYWP +G T+G+ V E DY + + R+V
Sbjct: 131 LKERKEEKCHQYWP-DQGC-WTYGNIRVCVEDCVVLVDYTIRKFCIQPQLPDGCKAPRLV 188
Query: 239 AHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIG 298
+ FT+W D+GVP + + ML+FL K + PI+VHCSAG+G
Sbjct: 189 SQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNP-------------VHAGPIVVHCSAGVG 235
Query: 299 RTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 354
RTGT +D ++ + VDV V RIR+QR +Q QY F + AL+EY L
Sbjct: 236 RTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALLEYYL 291
Score = 380 bits (978), Expect = e-126
Identities = 94/280 (33%), Positives = 144/280 (51%), Gaps = 20/280 (7%)
Query: 79 SGLCLEYEGFK-IKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYIN 137
GL E+ ++ + N+ K R ++ YD RV+LS + +DYIN
Sbjct: 319 IGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYIN 378
Query: 138 ANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGT 197
A+F+DGY+QK+ FI+TQGP+ +TVEDFWRM+WE ++ I+M T V ER ++KC QYWP
Sbjct: 379 ASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQEREQDKCYQYWPTE 438
Query: 198 EGTKMTHGDFLVTTECVTSSPDYVLSSLTLC-----NTKTLETRMVAHYQFTAWLDYGVP 252
+THG+ + + T S + + + + R+V + F W + G+P
Sbjct: 439 G--SVTHGEITIEIKNDTLSEAISIRDFLVTLNQPQARQGEQVRVVRQFHFHGWPEIGIP 496
Query: 253 ESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISR 312
M++ +A + Q PI VHCSAG GRTGT L + R
Sbjct: 497 AEGKGMIDLIAAVQKQQQ------------QTGNHPITVHCSAGAGRTGTFIALSNILER 544
Query: 313 LEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 352
++ G +DV VK +R QR H +Q +QY FC+ + ++
Sbjct: 545 VKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDF 584
Score = 127 bits (322), Expect = 1e-31
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
M++ +A + Q PI VHCSAG GRTGT L + R++
Sbjct: 499 GKGMIDLIAAVQKQQQ------------QTGNHPITVHCSAGAGRTGTFIALSNILERVK 546
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
G +DV VK +R QR H +Q +QY FC+ + ++
Sbjct: 547 AEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDF 584
Score = 121 bits (305), Expect = 2e-29
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+ ML+FL K + PI+VHCSAG+GRTGT +D ++ +
Sbjct: 205 PIGMLKFLKKVKTLNP-------------VHAGPIVVHCSAGVGRTGTFIVIDAMMAMMH 251
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYAL 501
VDV V RIR+QR +Q QY F + AL+EY L
Sbjct: 252 AEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALLEYYL 291
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 396 bits (1019), Expect = e-136
Identities = 109/313 (34%), Positives = 163/313 (52%), Gaps = 27/313 (8%)
Query: 56 TGTSSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRYSD 113
+G + + K + G E+E + + + + +R+EN KNRY +
Sbjct: 9 SGVDLGTENLYFQSMAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKN 68
Query: 114 VLAYDHTRVLLSQQD-DVPGSDYINANFV--------DGYKQKNAFISTQGPMQNTVEDF 164
+L +DHTRV+L D + P SDYINAN + + K K ++I+TQG +QNTV DF
Sbjct: 69 ILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDF 128
Query: 165 WRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSS 224
WRMV+++ + VI+MTT+ +ERG++KC +YWP E +G V +++ DY L
Sbjct: 129 WRMVFQENSRVIVMTTKEVERGKSKCVKYWP-DEYALKEYGVMRVRNVKESAAHDYTLRE 187
Query: 225 LTLCNTKTL-ETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGH 283
L L R V Y F W D+GVP +L+FL + H Q
Sbjct: 188 LKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQ-----------ESI 236
Query: 284 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGT---VDVRGTVKRIRSQRAHSIQMRD 340
P++VHCSAGIGRTGT +DI I + + G +DV T++ +RSQR+ +Q
Sbjct: 237 MDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEA 296
Query: 341 QYIFCHLALIEYA 353
QY F ++A+ Y
Sbjct: 297 QYRFIYMAVQHYI 309
Score = 130 bits (329), Expect = 3e-34
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+L+FL + + Q S P++VHCSAGIGRTGT +DI I +
Sbjct: 219 PGGVLDFLEEVHHKQES-----------IMDAGPVVVHCSAGIGRTGTFIVIDILIDIIR 267
Query: 462 DSGT---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+ G +DV T++ +RSQR+ +Q QY F ++A+ Y
Sbjct: 268 EKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYI 309
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 391 bits (1007), Expect = e-135
Identities = 98/297 (32%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 59 SSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYD 118
S+S+ L+ ++ + V S L E+ +I + + KNRY +L
Sbjct: 14 SASRVLTRSQLRDVVASS--HLLQSEFM--EIPMNFVDPKEIDIPRHGTKNRYKTILPNP 69
Query: 119 HTRVLLSQQD-DVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWRMVWEQQTLVI 176
+RV L ++ S YINAN++ GY K AFI+TQGPM NTV DFW+MVW++ + VI
Sbjct: 70 LSRVCLRPKNITDSLSTYINANYIRGYSGKEKAFIATQGPMINTVNDFWQMVWQEDSPVI 129
Query: 177 IMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETR 236
+M T++ E+ KC YWP +G V VT +Y + +L L T+
Sbjct: 130 VMITKLKEKNE-KCVLYWPEKR---GIYGKVEVLVTGVTECDNYTIRNLVLKQGS--HTQ 183
Query: 237 MVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAG 296
V HY +T+W D+ P+SA +L+ + + A P++VHCSAG
Sbjct: 184 HVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLA-----------SEGRGPVVVHCSAG 232
Query: 297 IGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
IGRTG I +L++ G VD V ++R R +Q +QY F H AL +
Sbjct: 233 IGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHHALCLFE 289
Score = 134 bits (340), Expect = 6e-36
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
A +L+ + + + P++VHCSAGIGRTG I +L+
Sbjct: 202 AQPLLQLMLDVEEDRLA-----------SEGRGPVVVHCSAGIGRTGCFIATSIGCQQLK 250
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+ G VD V ++R R +Q +QY F H AL +
Sbjct: 251 EEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHHALCLFE 289
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 401 bits (1032), Expect = e-134
Identities = 116/303 (38%), Positives = 172/303 (56%), Gaps = 30/303 (9%)
Query: 65 SIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRYSDVLAYDHTRV 122
+ + + S + G ++E + D + E + EN KNRY ++LAYDH+RV
Sbjct: 7 QFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRV 66
Query: 123 LLSQQ--DDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTT 180
L D SDYINAN+VDGY + A+I+TQGP+++T EDFWRM+WEQ T +I+M T
Sbjct: 67 KLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMIT 126
Query: 181 RVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTL------- 233
++E+GR KC QYWP TE ++ +G+ +VT + Y + ++ NTK
Sbjct: 127 NLVEKGRRKCDQYWP-TENSE-EYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNP 184
Query: 234 ----ETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPI 289
R+V Y +T W D GVPE AL +L F+ ++ + P P+
Sbjct: 185 KGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR-------------MPETGPV 231
Query: 290 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLAL 349
+VHCSAG+GRTGT +D + +++D TV+V G +K IR+QR + +Q +QYIF H AL
Sbjct: 232 LVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDAL 291
Query: 350 IEY 352
+E
Sbjct: 292 LEA 294
Score = 363 bits (934), Expect = e-119
Identities = 73/272 (26%), Positives = 112/272 (41%), Gaps = 22/272 (8%)
Query: 90 IKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNA 149
A++ N KNR S V+ + RV L+ + G+DYINA+++ GY + N
Sbjct: 335 CNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNE 394
Query: 150 FISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLV 209
FI TQ P+ +T +DFWRM+W+ +I+M ++ YWP + M F V
Sbjct: 395 FIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEF-VYWP-SREESMNCEAFTV 452
Query: 210 TTE-----CVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAK 264
T C+++ ++ L T+ V H+Q W + P S S E +
Sbjct: 453 TLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPIS--STFELINV 510
Query: 265 ARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGT 324
+ R P IVH G G LC L +LE+ VDV
Sbjct: 511 IKEEAL-------------TRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQV 557
Query: 325 VKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 356
K I R +QY F + A++ ++
Sbjct: 558 AKMINLMRPGVFTDIEQYQFIYKAMLSLVSTK 589
Score = 128 bits (323), Expect = 9e-32
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
AL +L F+ ++ + P P++VHCSAG+GRTGT +D + +++
Sbjct: 210 ALPVLTFVRRSSAAR-------------MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIK 256
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
D TV+V G +K IR+QR + +Q +QYIF H AL+E
Sbjct: 257 DKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEA 294
Score = 125 bits (315), Expect = 9e-31
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 13/100 (13%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS 463
S E + + R P IVH G G LC L +LE+
Sbjct: 503 STFELINVIKEEAL-------------TRDGPTIVHDEYGAVSAGMLCALTTLSQQLENE 549
Query: 464 GTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
VDV K I R +QY F + A++ ++
Sbjct: 550 NAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVSTK 589
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 388 bits (998), Expect = e-133
Identities = 98/289 (33%), Positives = 159/289 (55%), Gaps = 24/289 (8%)
Query: 80 GLCLEYEGFKIKPPDGSF--EVAKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYI 136
G E+E + + +R EN KNRY ++L +DH+RV+L +D ++PGSDYI
Sbjct: 1 GFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYI 60
Query: 137 NANFVDGY-----KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCA 191
NAN++ + +I++QG ++ TV DFW+M W++ + VI+MTTR +E+GRNKC
Sbjct: 61 NANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCV 120
Query: 192 QYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLE-TRMVAHYQFTAWLDYG 250
YWP G + +G + VT + +Y L +L + + R + HYQ+ +W D+G
Sbjct: 121 PYWP-EVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHG 179
Query: 251 VPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICI 310
VP +L FL + Q P PIIVH SAGIGRTGT+ +D+ +
Sbjct: 180 VPSEPGGVLSFLDQINQRQ-----------ESLPHAGPIIVHSSAGIGRTGTIIVIDMLM 228
Query: 311 SRLEDSG---TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 356
+ G +D++ T++ +R+QR+ +Q QY F ++A+ ++ +
Sbjct: 229 ENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETT 277
Score = 130 bits (330), Expect = 1e-34
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+L FL + Q S P PIIVH SAGIGRTGT+ +D+ + +
Sbjct: 184 PGGVLSFLDQINQRQES-----------LPHAGPIIVHSSAGIGRTGTIIVIDMLMENIS 232
Query: 462 DSG---TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
G +D++ T++ +R+QR+ +Q QY F ++A+ ++ +
Sbjct: 233 TKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETT 277
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 385 bits (990), Expect = e-132
Identities = 101/296 (34%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 61 SQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHT 120
+ G + + + L E+ KI S E + K+RY +L +
Sbjct: 26 TAGHPLTRWALQRQPPSPKQLEEEFL--KIPSNFVSPEDLDIPGHASKDRYKTILPNPQS 83
Query: 121 RVLLSQQDDVPGSDYINANFVDGYKQK-NAFISTQGPMQNTVEDFWRMVWEQQTLVIIMT 179
RV L + DYINAN++ GY K +I+TQGPM NTV DFW MVW+++ +I+M
Sbjct: 84 RVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVML 143
Query: 180 TRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVA 239
T++ E G+ KC YWP E T+G F + + + P+Y + LT+ + E R V
Sbjct: 144 TQLRE-GKEKCVHYWPTEE---ETYGPFQIRIQDMKECPEYTVRQLTIQYQE--ERRSVK 197
Query: 240 HYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGR 299
H F+AW D+ PESA +L +A+ + PI+VHCSAGIGR
Sbjct: 198 HILFSAWPDHQTPESAGPLLRLVAEVEESPET-----------AAHPGPIVVHCSAGIGR 246
Query: 300 TGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 355
TG I +L+ G VD+ G V ++R R IQ +QY F H L YA
Sbjct: 247 TGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALYAGQ 302
Score = 134 bits (340), Expect = 8e-36
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
A +L +A+ + + PI+VHCSAGIGRTG I +L+
Sbjct: 213 AGPLLRLVAEVEESPET-----------AAHPGPIVVHCSAGIGRTGCFIATRIGCQQLK 261
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALS 502
G VD+ G V ++R R IQ +QY F H L YA
Sbjct: 262 ARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALYAGQ 302
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 380 bits (978), Expect = e-130
Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 33/308 (10%)
Query: 59 SSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYD 118
S+++ +A+ S + E+ + + + +N KNRY D+LA +
Sbjct: 2 STAKSFPMAQLSTRA---QYSRMQREFVQLQRQENPRNINFTTSLKNRHKNRYLDILANE 58
Query: 119 HTRV---LLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLV 175
T L + YIN N +D + F++ Q P+ V DF + E++ +
Sbjct: 59 ETIYPPVLKAVGAQPGRYPYINGNLID-LDLPHTFVACQAPVPQGVPDFLETLSEKKVDL 117
Query: 176 IIMTTRVIERGRNKCAQYWPGTEGTKMT---HGDFLVTTECVTSSPDYVLSSLTLC---- 228
++M T++ E G K +YWP E ++ G + + V + L +
Sbjct: 118 VVMLTKLREGGVLKAERYWPEEEEDSLSFPESGHDAIKVTRDAEASYEVDAELDIVRRPL 177
Query: 229 --NTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRG 286
+ V Q+ W D+GVPESA S E L+ ++
Sbjct: 178 VIHVPGKPMHRVLQVQYVGWPDHGVPESAASFDELLSVIKN---------------CVTT 222
Query: 287 PPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVD--VRGTVKRIRSQRAHSIQMRDQYIF 344
PI+VHCSAGIGRTGTL + +E D V V ++ +R +Q +QY
Sbjct: 223 SPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQKRFGMVQRLEQYAV 282
Query: 345 CHLALIEY 352
++ ++
Sbjct: 283 IYMTVLGR 290
Score = 129 bits (326), Expect = 6e-34
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 17/100 (17%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
A S E L+ + PI+VHCSAGIGRTGTL + +E
Sbjct: 206 AASFDELLSVIK---------------NCVTTSPILVHCSAGIGRTGTLIGAYAALLHIE 250
Query: 462 DSGTVD--VRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 499
D V V ++ +R +Q +QY ++ ++
Sbjct: 251 RGILTDSTVYSIVAAMKQKRFGMVQRLEQYAVIYMTVLGR 290
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 379 bits (976), Expect = e-130
Identities = 94/282 (33%), Positives = 138/282 (48%), Gaps = 20/282 (7%)
Query: 74 RSKGRSGLCLEYEGFKIKPPDGSFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPG 132
++ L E+ +I + + KNRY +L H+RV L+ D D P
Sbjct: 35 KALDPFLLQAEFF--EIPMNFVDPKEYDIPGLVRKNRYKTILPNPHSRVCLTSPDPDDPL 92
Query: 133 SDYINANFVDGYK-QKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCA 191
S YINAN++ GY ++ +I+TQGP+ +TV DFWRMVW++ T +I+M T + E KC
Sbjct: 93 SSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITNI-EEMNEKCT 151
Query: 192 QYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGV 251
+YWP + + + +T + V + DY L ++L + E R + HY FT+W D
Sbjct: 152 EYWPEEQ---VAYDGVEITVQKVIHTEDYRLRLISLKSGT--EERGLKHYWFTSWPDQKT 206
Query: 252 PESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICIS 311
P+ A +L + + P PIIVH SAGIGRTG IC
Sbjct: 207 PDRAPPLLHLVREVEEAAQQ----------EGPHCAPIIVHSSAGIGRTGCFIATSICCQ 256
Query: 312 RLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 353
+L G VD+ T ++R R IQ +QY F H + Y
Sbjct: 257 QLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLYE 298
Score = 133 bits (338), Expect = 1e-35
Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
A +L + + P PIIVH SAGIGRTG IC +L
Sbjct: 210 APPLLHLVREVEEAAQ----------QEGPHCAPIIVHSSAGIGRTGCFIATSICCQQLR 259
Query: 462 DSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
G VD+ T ++R R IQ +QY F H + Y
Sbjct: 260 QEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLYE 298
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 379 bits (976), Expect = e-127
Identities = 103/336 (30%), Positives = 170/336 (50%), Gaps = 24/336 (7%)
Query: 33 KVEIEDAVKRVRFSDDDSLHADPTGTSSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKP 92
K IE+A + + + ++G E+E + +
Sbjct: 196 KTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTAKAGFWEEFESLQKQE 255
Query: 93 PDG--SFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFVDGY----- 144
+R EN KNRY ++L +DH+RV+L +D ++PGSDYINAN++
Sbjct: 256 VKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPD 315
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ +I++QG ++ TV DFW+M W++ + VI+MTTR +E+GRNKC YWP G + +
Sbjct: 316 ENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWP-EVGMQRAY 374
Query: 205 GDFLVTTECVTSSPDYVLSSLTLCNTKTLE-TRMVAHYQFTAWLDYGVPESALSMLEFLA 263
G + VT + +Y L +L + + R + HYQ+ +W D+GVP +L FL
Sbjct: 375 GPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLD 434
Query: 264 KARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG---TVD 320
+ Q P PIIVHCSAGIGRTGT+ +D+ + + G +D
Sbjct: 435 QINQRQ-----------ESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDID 483
Query: 321 VRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 356
++ T++ +R+QR+ +Q QY F ++A+ ++ +
Sbjct: 484 IQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETT 519
Score = 130 bits (328), Expect = 1e-32
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+L FL + Q S P PIIVHCSAGIGRTGT+ +D+ + +
Sbjct: 426 PGGVLSFLDQINQRQES-----------LPHAGPIIVHCSAGIGRTGTIIVIDMLMENIS 474
Query: 462 DSG---TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
G +D++ T++ +R+QR+ +Q QY F ++A+ ++ +
Sbjct: 475 TKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETT 519
Score = 108 bits (271), Expect = 2e-25
Identities = 24/156 (15%), Positives = 42/156 (26%), Gaps = 9/156 (5%)
Query: 192 QYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGV 251
+Y+ +G ++ + + D + + + + W + V
Sbjct: 77 EYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPW-TFLV 135
Query: 252 PESALSMLEFLAKARHTQAALLADLGDTWAGHP-RGPPIIVHCSAGIGRTGTLCTLDICI 310
ES +F+ +L+D G P R I V C G G L T D
Sbjct: 136 RESLSQPGDFVLS-------VLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLT 188
Query: 311 SRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
+E + R R
Sbjct: 189 DLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIE 224
Score = 66.4 bits (162), Expect = 8e-12
Identities = 17/77 (22%), Positives = 21/77 (27%), Gaps = 1/77 (1%)
Query: 418 SLLADLGDTWAGHP-RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIR 476
S+L+D G P R I V C G G L T D +E +
Sbjct: 148 SVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFV 207
Query: 477 SQRAHSIQMRDQYIFCH 493
R R
Sbjct: 208 YLRQPYYATRVNAADIE 224
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 380 bits (977), Expect = e-126
Identities = 102/336 (30%), Positives = 169/336 (50%), Gaps = 24/336 (7%)
Query: 33 KVEIEDAVKRVRFSDDDSLHADPTGTSSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKP 92
K IE+A + + + ++G E+E + +
Sbjct: 196 KTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTAKAGFWEEFESLQKQE 255
Query: 93 PDG--SFEVAKRRENLFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFVDGY----- 144
+R EN KNRY ++L +DH+RV+L +D ++PGSDYINAN++
Sbjct: 256 VKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPD 315
Query: 145 KQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTH 204
+ +I++QG ++ TV DFW+M W++ + VI+MTTR +E+GRNKC YWP G + +
Sbjct: 316 ENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWP-EVGMQRAY 374
Query: 205 GDFLVTTECVTSSPDYVLSSLTLCNTKTLE-TRMVAHYQFTAWLDYGVPESALSMLEFLA 263
G + VT + +Y L +L + + R + HYQ+ +W D+GVP +L FL
Sbjct: 375 GPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLD 434
Query: 264 KARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSG---TVD 320
+ Q P PIIVH SAGIGRTGT+ +D+ + + G +D
Sbjct: 435 QINQRQ-----------ESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDID 483
Query: 321 VRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 356
++ T++ +R+QR+ +Q QY F ++A+ ++ +
Sbjct: 484 IQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETT 519
Score = 131 bits (331), Expect = 7e-33
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+L FL + Q S P PIIVH SAGIGRTGT+ +D+ + +
Sbjct: 426 PGGVLSFLDQINQRQES-----------LPHAGPIIVHSSAGIGRTGTIIVIDMLMENIS 474
Query: 462 DSG---TVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSR 503
G +D++ T++ +R+QR+ +Q QY F ++A+ ++ +
Sbjct: 475 TKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETT 519
Score = 108 bits (270), Expect = 4e-25
Identities = 23/156 (14%), Positives = 41/156 (26%), Gaps = 9/156 (5%)
Query: 192 QYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGV 251
+Y+ +G ++ + + D + + + + W + V
Sbjct: 77 EYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPW-TFLV 135
Query: 252 PESALSMLEFLAKARHTQAALLADLGDTWAGHPRGP-PIIVHCSAGIGRTGTLCTLDICI 310
ES +F+ +L+D G P I V C G G L T D
Sbjct: 136 RESLSQPGDFVLS-------VLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLT 188
Query: 311 SRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
+E + R R
Sbjct: 189 DLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIE 224
Score = 65.7 bits (160), Expect = 2e-11
Identities = 16/77 (20%), Positives = 20/77 (25%), Gaps = 1/77 (1%)
Query: 418 SLLADLGDTWAGHPRGP-PIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIR 476
S+L+D G P I V C G G L T D +E +
Sbjct: 148 SVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFV 207
Query: 477 SQRAHSIQMRDQYIFCH 493
R R
Sbjct: 208 YLRQPYYATRVNAADIE 224
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 377 bits (970), Expect = e-126
Identities = 111/321 (34%), Positives = 164/321 (51%), Gaps = 33/321 (10%)
Query: 54 DPTGTSSSQGLSIAEFVEAVRS------KGRSGLCLEYEGFKIKPPDGSF--EVAKRREN 105
P T+ I V + K + G E+E + + + + +R+EN
Sbjct: 214 QPLNTTRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQEN 273
Query: 106 LFKNRYSDVLAYDHTRVLLSQQD-DVPGSDYINANFV--------DGYKQKNAFISTQGP 156
KNRY ++L +DHTRV+L D + P SDYINAN + + K K ++I+TQG
Sbjct: 274 KNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGC 333
Query: 157 MQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTS 216
+QNTV DFWRMV+++ + VI+MTT+ +ERG++KC +YWP E +G V ++
Sbjct: 334 LQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWP-DEYALKEYGVMRVRNVKESA 392
Query: 217 SPDYVLSSLTLCNTKTL-ETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLAD 275
+ DY L L L R V Y F W D+GVP +L+FL + H Q
Sbjct: 393 AHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQ------ 446
Query: 276 LGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGT---VDVRGTVKRIRSQR 332
P++VHCSAGIGRTGT +DI I + + G +DV T++ +RSQR
Sbjct: 447 -----ESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQR 501
Query: 333 AHSIQMRDQYIFCHLALIEYA 353
+ +Q QY ++A+ Y
Sbjct: 502 SGMVQTEAQYRSIYMAVQHYI 522
Score = 129 bits (327), Expect = 1e-32
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 402 ALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLE 461
+L+FL + + Q S P++VHCSAGIGRTGT +DI I +
Sbjct: 432 PGGVLDFLEEVHHKQES-----------IMDAGPVVVHCSAGIGRTGTFIVIDILIDIIR 480
Query: 462 DSGT---VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYA 500
+ G +DV T++ +RSQR+ +Q QY ++A+ Y
Sbjct: 481 EKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRSIYMAVQHYI 522
Score = 54.5 bits (131), Expect = 5e-08
Identities = 8/58 (13%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 281 AGHPRGPPIIVHCSAG---IGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHS 335
G + +++ C +G +L + + + V+ GTV +++ +
Sbjct: 162 DGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTT 219
Score = 54.5 bits (131), Expect = 5e-08
Identities = 8/58 (13%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 428 AGHPRGPPIIVHCSAG---IGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHS 482
G + +++ C +G +L + + + V+ GTV +++ +
Sbjct: 162 DGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTT 219
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 331 bits (851), Expect = e-111
Identities = 48/315 (15%), Positives = 94/315 (29%), Gaps = 29/315 (9%)
Query: 49 DSLHADPTGTSSSQGLSIAEFVEAVRSKGRSGLCLEYEGFKIKPPDGSF--EVAKRRENL 106
+ H + + V + R+ L + + +
Sbjct: 3 ERPHTSGHHGAGEARATAPSTVSPYGPEARAELSSRLTTLRNTLAPATNDPRYLQACGGE 62
Query: 107 FKNRYSDVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGPMQNTVEDFWR 166
NR+ D+ T V +NAN++ I+ Q P+Q+ +E +R
Sbjct: 63 KLNRFRDIQCRRQTAVRA----------DLNANYIQVGN--TRTIACQYPLQSQLESHFR 110
Query: 167 MVWEQQTLVIIMTTRVIERGRNKCA--QYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSS 224
M+ E +T V+ + E + Y+ + T+G V ++
Sbjct: 111 MLAENRTPVLAVLASSSEIANQRFGMPDYFRQSG----TYGSITVESKMTQQVGLGDGIM 166
Query: 225 LTLCNTKTL----ETRMVAHYQFTAWLDYGVP--ESALSMLEFLAKARHTQAALLADLGD 278
+ +T V W D E ++ + + T+ + G
Sbjct: 167 ADMYTLTIREAGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGS 226
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQR-AHSIQ 337
+ ++H AG+GRT L + + V V ++R QR +Q
Sbjct: 227 SAVADDSKLRPVIHSRAGVGRTAQLI--GAMCMNDSRNSQLSVEDMVSQMRVQRNGIMVQ 284
Query: 338 MRDQYIFCHLALIEY 352
+Q
Sbjct: 285 KDEQLDVLIKLAEGQ 299
Score = 119 bits (301), Expect = 2e-30
Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Query: 401 AALSMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRL 460
++ + + T+ ++ G + ++H AG+GRT L
Sbjct: 202 VTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLI--GAMCMND 259
Query: 461 EDSGTVDVRGTVKRIRSQR-AHSIQMRDQYIFCHLALIEY 499
+ + V V ++R QR +Q +Q
Sbjct: 260 SRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEGQ 299
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 300 bits (770), Expect = 6e-98
Identities = 45/367 (12%), Positives = 115/367 (31%), Gaps = 39/367 (10%)
Query: 8 VKTPQTTLSKKRKAETSPSAWPEAMKV--EIEDAVKRVRFSDDDSLHADPTGTSSSQGLS 65
++ ++ S + + E + V + + + G
Sbjct: 34 LRENFQEMASGNGPLRSLMTNLQNLNKIPEAKQLNDYVTTLTNIQVGVARFSQWGTCGGE 93
Query: 66 IAEFVEAVRS-------KGRSGLCLEYEGFK------IKPPDGSFEVAKRRENLFKNRYS 112
+ +V+ + K + E + ++ L + S
Sbjct: 94 VERWVDKASTHELTQAVKKIHVIAKELKNVTAELEKIEAGAPMPQTMSGPTLGLARFAVS 153
Query: 113 DVLAYDHTRVLLSQQDDVPGSDYINANFVDGYKQKNAFISTQGP--MQNTVEDFWRMVWE 170
+ T+V LS +N DG K ++ P + +E +M+ E
Sbjct: 154 SIPINQQTQVKLSD----GMPVPVNTLTFDG---KPVALAGSYPKNTPDALEAHMKMLLE 206
Query: 171 QQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDY-VLSSLTLCN 229
++ +++ T + + Y+ G+ T G+ ++ V+S+ + +
Sbjct: 207 KECSCLVVLTSEDQMQAKQLPPYFRGSY----TFGEVHTNSQKVSSASQGEAIDQYNMQL 262
Query: 230 TKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPI 289
+ + + W D+ S + + +++ G
Sbjct: 263 SCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQN-----GAPGRSSSDKHLP 317
Query: 290 IVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHS-IQMRDQYIFCHLA 348
++HC G+GRTGT+ + L+D+ ++ R R + ++ Q++
Sbjct: 318 MIHCLGGVGRTGTMAAALV----LKDNPHSNLEQVRADFRDSRNNRMLEDASQFVQLKAM 373
Query: 349 LIEYALS 355
+ ++
Sbjct: 374 QAQLLMT 380
Score = 114 bits (286), Expect = 7e-28
Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 10/100 (10%)
Query: 404 SMLEFLAKARYTQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDS 463
+ + + + + G ++HC G+GRTGT+ + L+D+
Sbjct: 290 QLEYLADRVKNSNQN-----GAPGRSSSDKHLPMIHCLGGVGRTGTMAAALV----LKDN 340
Query: 464 GTVDVRGTVKRIRSQRAHS-IQMRDQYIFCHLALIEYALS 502
++ R R + ++ Q++ + ++
Sbjct: 341 PHSNLEQVRADFRDSRNNRMLEDASQFVQLKAMQAQLLMT 380
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 75.3 bits (185), Expect = 3e-16
Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 24/118 (20%)
Query: 229 NTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPP 288
L+ + D GVP + L +
Sbjct: 51 YLSILKKNGLQPLHI-PIPDGGVPSDS-QFLTIMKWLLS-----------------EKEG 91
Query: 289 IIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCH 346
+VHC GIGRTGT+ + ++ ++V + +R R ++Q +Q +F
Sbjct: 92 NLVHCVGGIGRTGTILASYLILTE-----GLEVESAIDEVRLVRPGAVQTYEQEMFLL 144
Score = 66.0 bits (161), Expect = 4e-13
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
+VHC GIGRTGT+ + ++ ++V + +R R ++Q +Q +F
Sbjct: 88 EKEGNLVHCVGGIGRTGTILASYLILTE-----GLEVESAIDEVRLVRPGAVQTYEQEMF 142
Query: 492 CH 493
Sbjct: 143 LL 144
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 73.5 bits (180), Expect = 9e-14
Identities = 102/582 (17%), Positives = 166/582 (28%), Gaps = 196/582 (33%)
Query: 22 ETS---PSA-WPEAMKVEIEDAVKRVRFSDDDSLHADPTGTSSS-QGLSIAEFVEAVRSK 76
E P+A + A + + +F+ L G ++ + + AE
Sbjct: 17 EHVLLVPTASFFIA-------SQLQEQFNK--ILPEPTEGFAADDEPTTPAE-------- 59
Query: 77 GRSGLCLEYEGF---KIKP-PDGSF-EVAKRRENLFKNRY---SDVLAYDHTRV--LLSQ 126
L ++ G+ ++P G F +V F+N Y +D+ H LL +
Sbjct: 60 ----LVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDI----HALAAKLLQE 111
Query: 127 QDDVPGSD------YINANFVDGY--------------KQKNAFISTQ--GPMQNTVEDF 164
D YI A + + NA + G Q +D+
Sbjct: 112 NDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGG--QGNTDDY 169
Query: 165 W---RMVWEQ-----QTLVIIMTTRVIE--RGRNKCAQYWPGTEGTKMTHG-DFL--VTT 211
+ R +++ L+ + E R + + G + L +
Sbjct: 170 FEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFT--------QGLNILEWLEN 221
Query: 212 ECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGV-PESALSMLEFLAKARHTQ- 269
T DY+LS C + ++ AHY TA L G P S L+ H+Q
Sbjct: 222 PSNTPDKDYLLSIPISCPLIGV-IQL-AHYVVTAKL-LGFTPGELRSYLK--GATGHSQG 276
Query: 270 ---AALLADLGDTWAGHPRGPPIIVHCSAGIG-R-TGTLCTLDICISRLEDSGTVD---- 320
A +A D+W + IG R + S LEDS +
Sbjct: 277 LVTAVAIA-ETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVP 335
Query: 321 -----VRG----TV-KRIRSQRAH-------SIQM---RDQYIFC-H-LALIEYALSRGL 358
+ V + +H I + + +L Y L+ L
Sbjct: 336 SPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSL--YGLNLTL 393
Query: 359 --ISAKPDLSGFQTSCATSR-PGGHLGRAPA--------GAPNHRPLLGR-----DRAAA 402
A L Q SR P R +P H LL ++
Sbjct: 394 RKAKAPSGLD--Q-----SRIP--FSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLV 444
Query: 403 LSMLEFLAKA--------------RYTQASLLADLGDT-------WAGHPRGPPIIVHCS 441
+ + F AK R S+ + D W
Sbjct: 445 KNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKW-------ETTTQFK 497
Query: 442 A------GIGRTGTLCTLDICISRLED--------SGTVDVR 469
A G G L L R +D +GT+D+
Sbjct: 498 ATHILDFGPGGASGLGVL---THRNKDGTGVRVIVAGTLDIN 536
Score = 43.5 bits (102), Expect = 2e-04
Identities = 39/235 (16%), Positives = 67/235 (28%), Gaps = 73/235 (31%)
Query: 166 RMVWEQ------QTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPD 219
+ VW + T + VI N ++ G +G ++ + E + D
Sbjct: 1643 QDVWNRADNHFKDTYGFSILDIVINNPVNL-TIHFGGEKGKRIRENYSAMIFE---TIVD 1698
Query: 220 YVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLA----- 274
L + + + Y F + + LS +F TQ AL
Sbjct: 1699 GKLKTEKIFKEINEHST---SYTFRS------EKGLLSATQF------TQPALTLMEKAA 1743
Query: 275 ----------DLGDTWAGHPRGPPIIVH------CSAGIGRTGTLCTLDICISRLEDSGT 318
T+AGH G A + +S +E
Sbjct: 1744 FEDLKSKGLIPADATFAGHSLG------EYAALASLADV------------MS-IES--L 1782
Query: 319 VDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAKPDLSGFQTSCA 373
V+V V R RD+ + +I A++ G ++A Q
Sbjct: 1783 VEV---V-FYRGMTMQVAVPRDELGRSNYGMI--AINPGRVAASFSQEALQYVVE 1831
Score = 31.2 bits (70), Expect = 0.96
Identities = 29/183 (15%), Positives = 50/183 (27%), Gaps = 68/183 (37%)
Query: 374 TSRPGGHLGRA-------------PAGAPNHRPLLGRDRAAALSMLEF------LAKARY 414
T GG G+ G + ++ + F L+ ++
Sbjct: 1673 TIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIF-KEINEHSTSYTFRSEKGLLSATQF 1731
Query: 415 TQASLLA---------------DLGDTWAGHPRGPPIIVH------CSAGIGRTGTLCTL 453
TQ +L T+AGH G A +
Sbjct: 1732 TQPALTLMEKAAFEDLKSKGLIPADATFAGHSLG------EYAALASLADV--------- 1776
Query: 454 DICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEYALSRGLISAKPDLS 513
+S +E V+V V R RD+ + +I A++ G ++A
Sbjct: 1777 ---MS-IES--LVEV---V-FYRGMTMQVAVPRDELGRSNYGMI--AINPGRVAASFSQE 1824
Query: 514 GFQ 516
Q
Sbjct: 1825 ALQ 1827
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 52.0 bits (125), Expect = 3e-08
Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 26/124 (20%)
Query: 225 LTLCNTKTLETRMVA--HYQFTAWLDYGVP--ESALSMLEFLAKARHTQAALLADLGDTW 280
++L + D+ P + ++ + +A
Sbjct: 41 VSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANA------------- 87
Query: 281 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 340
RG + VHC+ G GRTGT+ L + + IR R SI+ +
Sbjct: 88 ----RGEAVGVHCALGFGRTGTM-----LACYLVKERGLAAGDAIAEIRRLRPGSIETYE 138
Query: 341 QYIF 344
Q
Sbjct: 139 QEKA 142
Score = 48.9 bits (117), Expect = 3e-07
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIF 491
RG + VHC+ G GRTGT+ L + + IR R SI+ +Q
Sbjct: 88 RGEAVGVHCALGFGRTGTM-----LACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKA 142
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 51.0 bits (121), Expect = 8e-07
Identities = 54/386 (13%), Positives = 101/386 (26%), Gaps = 131/386 (33%)
Query: 93 PDGSFEVAKRRE--NLFKNRYSDVLAYDHTRVLLSQQ--------DDVPGSDY--INANF 140
D + + E ++ ++ + LLS+Q ++V +Y + +
Sbjct: 39 QDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI 98
Query: 141 VDGYKQKNA----FISTQGPMQNTVEDF-----WR--MVWE-QQTL--------VII--M 178
+Q + +I + + N + F R + +Q L V+I +
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV 158
Query: 179 -----TTRVIERGRNKCAQ-------YWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSL- 225
T ++ + Q +W + C +SP+ VL L
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFW-------LNLK------NC--NSPETVLEMLQ 203
Query: 226 TLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPR 285
L + + L ++ L L L + LL L + + +
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL--LKSKPYEN-CLL-VLLNVQ--NAK 257
Query: 286 GPPII----VHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 341
+ C L T +R D
Sbjct: 258 ---AWNAFNLSCK-------ILLT-----TR--FKQVTDFLSAATT-------------- 286
Query: 342 YIFCHLALIEYALSRGLISAKPDLSGFQTSCATSRPGGHLGRAPAGAPNHRPLLGRDRAA 401
H++L S L ++ RP L P P
Sbjct: 287 ---THISLDH--HSMTL--TPDEVKSLLLKYLDCRPQD-L---PREVLTTNPR------- 328
Query: 402 ALSMLEFLAKARYTQASLLADLGDTW 427
LS++ A + D TW
Sbjct: 329 RLSII----------AESIRDGLATW 344
Score = 44.1 bits (103), Expect = 1e-04
Identities = 46/345 (13%), Positives = 89/345 (25%), Gaps = 119/345 (34%)
Query: 159 NTVEDFWRMVWEQQTL-VIIMTTRVIERGRNKCAQYW----PGTEGTKMTHGDFLVTTEC 213
V+D + + ++ + IIM+ + +W E + + L
Sbjct: 36 KDVQDMPKSILSKEEIDHIIMSKDAVSGTL---RLFWTLLSKQEEMVQKFVEEVL----- 87
Query: 214 VTSSPDY--VLSSL-TLCNTKTLETRMVAHYQFTAWLD------YGVP--ESALSMLEFL 262
+Y ++S + T ++ TRM + + D Y V + L + + L
Sbjct: 88 ---RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL 144
Query: 263 AKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVR 322
+ R +++ G G+T + LD+C
Sbjct: 145 LELRP------------------AKNVLIDGVLGSGKT-WV-ALDVC------------- 171
Query: 323 GTVKRIRSQRAHSIQMR-DQYIF------CHLALIEYALSRGLISAKPDLSGFQTSCATS 375
++ +Q + D IF C+ S + L Q
Sbjct: 172 ---------LSYKVQCKMDFKIFWLNLKNCN-------------SPETVLEMLQKLLYQI 209
Query: 376 RPGGHLGRAPAGAPNHRPLLGRDRAAALSMLEFLAKARYTQASLLADLGDTWAGHPRGPP 435
P + R + + L Y LL L + + +
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAE-----LRRLLKSKPYEN-CLL-VLLNVQ--NAK--- 257
Query: 436 II----VHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIR 476
+ C L T +R D
Sbjct: 258 AWNAFNLSCK-------ILLT-----TR--FKQVTDFLSAATTTH 288
Score = 39.8 bits (92), Expect = 0.002
Identities = 54/361 (14%), Positives = 91/361 (25%), Gaps = 131/361 (36%)
Query: 12 QTTLSKKRKAETSPSAWPEAMKVEIEDAVKRVR--FS-----------DD--DSLHADPT 56
Q L + TS S +K+ I +R + ++ +
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF 262
Query: 57 GTSS-----SQGLSIAEFVEAVRSKGRS--------------GLCLEYEGFKIK--PPDG 95
S ++ + +F+ A + S L L+Y + + P
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-- 320
Query: 96 SFEV------------AKRRENLFK-NRYSDVLAYDHTRVL---LSQQDDVPGSDYINAN 139
EV R+ L + + V T ++ L+ +
Sbjct: 321 --EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE----PAEYRKM 374
Query: 140 FVD-GYKQKNAFISTQGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQY----- 193
F +A I T + ++W + + NK +Y
Sbjct: 375 FDRLSVFPPSAHIPTI-----LLS----LIWFD------VIKSDVMVVVNKLHKYSLVEK 419
Query: 194 WPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKTLETRMVAHYQFTA-------- 245
P E T + Y+ + L N L +V HY
Sbjct: 420 QP-KESTISIPS--I-----------YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465
Query: 246 --WLD-Y------------GVPESALSM------LEFL-AKARHTQAA------LLADLG 277
+LD Y PE FL K RH A +L L
Sbjct: 466 PPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQ 525
Query: 278 D 278
Sbjct: 526 Q 526
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 46.1 bits (109), Expect = 4e-06
Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 17/117 (14%)
Query: 225 LTLC----NTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTW 280
+ +C + +++R + + + + D P A+ + +L A
Sbjct: 52 VRVCGPTYDATLVKSRGIDVHSW-PFDDGAPPTRAV-LDSWLKLLDTELAR------QQE 103
Query: 281 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 337
P I VHC AG+GR L L L + G V + IR +R +I
Sbjct: 104 DPSVPPPTIGVHCVAGLGRAPILVAL-----ALVEYGNVSALDAIALIREKRKGAIN 155
Score = 41.1 bits (96), Expect = 2e-04
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Query: 425 DTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 484
P I VHC AG+GR L L L + G V + IR +R +I
Sbjct: 101 QQEDPSVPPPTIGVHCVAGLGRAPILVAL-----ALVEYGNVSALDAIALIREKRKGAIN 155
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 45.4 bits (107), Expect = 1e-05
Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 21/110 (19%)
Query: 238 VAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGI 297
+ + D G P+ A S E + + ++H G+
Sbjct: 101 IITHHH-PIADGGTPDIA-SCCEIMEELTTCLK--------------NYRKTLIHSYGGL 144
Query: 298 GRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH-SIQMRDQYIFCH 346
GR+ + L S T+ + +R R +IQ QY + H
Sbjct: 145 GRSCLV----AACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLH 190
Score = 43.1 bits (101), Expect = 7e-05
Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 5/80 (6%)
Query: 415 TQASLLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKR 474
AS + + ++H G+GR+ + L S T+ +
Sbjct: 115 DIASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLV----AACLLLYLSDTISPEQAIDS 170
Query: 475 IRSQRAH-SIQMRDQYIFCH 493
+R R +IQ QY + H
Sbjct: 171 LRDLRGSGAIQTIKQYNYLH 190
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 43.4 bits (102), Expect = 4e-05
Identities = 25/124 (20%), Positives = 41/124 (33%), Gaps = 24/124 (19%)
Query: 225 LTLCNT-----KTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDT 279
+ L NT R Y+ +P + EF+
Sbjct: 60 IDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLP-PESIVQEFIDTV------------KE 106
Query: 280 WAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMR 339
+ G + VHC+ GI RTG + +C L + + + + R R H I+ R
Sbjct: 107 FTEKCPGMLVGVHCTHGINRTGYM----VC-RYLMHTLGIAPQEAIDRFEKARGHKIE-R 160
Query: 340 DQYI 343
Y+
Sbjct: 161 QNYV 164
Score = 42.2 bits (99), Expect = 8e-05
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Query: 422 DLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH 481
D + G + VHC+ GI RTG + +C L + + + + R R H
Sbjct: 102 DTVKEFTEKCPGMLVGVHCTHGINRTGYM----VC-RYLMHTLGIAPQEAIDRFEKARGH 156
Query: 482 SIQMRDQYI 490
I+ R Y+
Sbjct: 157 KIE-RQNYV 164
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 45.2 bits (106), Expect = 4e-05
Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 16/109 (14%)
Query: 229 NTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPP 288
+ + + A+Y D+ P+ + +FL + P+
Sbjct: 191 TEEEMVKQHGANYFRLTLQDHFRPDDP-DVDKFLEFYKSL---------------PKDAW 234
Query: 289 IIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 337
+ HC AG+GRT + + +D D+ K I I
Sbjct: 235 LHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQRQKLIGIVDLSEIP 283
Score = 41.3 bits (96), Expect = 7e-04
Identities = 13/54 (24%), Positives = 20/54 (37%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 484
P+ + HC AG+GRT + + +D D+ K I I
Sbjct: 230 PKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQRQKLIGIVDLSEIP 283
Score = 39.0 bits (90), Expect = 0.004
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 16/75 (21%)
Query: 229 NTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPP 288
+ L + HY A D+ P +A ++ EF+ R P
Sbjct: 489 TEQQLVEKNGLHYYRIAATDHIWPSAA-NIDEFINFTRTM---------------PANAW 532
Query: 289 IIVHCSAGIGRTGTL 303
+ HC AG GRT
Sbjct: 533 LHFHCQAGAGRTTAY 547
Score = 38.2 bits (88), Expect = 0.007
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 431 PRGPPIIVHCSAGIGRTGTL 450
P + HC AG GRT
Sbjct: 528 PANAWLHFHCQAGAGRTTAY 547
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 42.7 bits (100), Expect = 5e-05
Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 24/117 (20%)
Query: 225 LTLC----NTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTW 280
+ +C +T +E + + + D P S + ++L L
Sbjct: 45 VRVCEATYDTTLVEKEGIHVLDWP-FDDGAPP-SNQIVDDWL------------SLVKIK 90
Query: 281 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 337
G I VHC AG+GR L L + + V+ IR +R +
Sbjct: 91 FREEPGCCIAVHCVAGLGRAPVLVALALIEGGM------KYEDAVQFIRQKRRGAFN 141
Score = 40.4 bits (94), Expect = 4e-04
Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 6/63 (9%)
Query: 422 DLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH 481
L G I VHC AG+GR L L + + V+ IR +R
Sbjct: 85 SLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGM------KYEDAVQFIRQKRRG 138
Query: 482 SIQ 484
+
Sbjct: 139 AFN 141
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 42.8 bits (100), Expect = 1e-04
Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 25/123 (20%)
Query: 227 LCNT------KTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTW 280
L NT +E + + + +G + + F+ L + +
Sbjct: 89 LTNTSRFYDRNDIEKEGIKYIKLQCK-GHGECPTTENTETFI------------RLCERF 135
Query: 281 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRD 340
I VHC+ G RTG L IC + L + + V R I +
Sbjct: 136 NERNPPELIGVHCTHGFNRTGFL----IC-AFLVEKMDWSIEAAVATFAQARPPGI-YKG 189
Query: 341 QYI 343
Y+
Sbjct: 190 DYL 192
Score = 40.1 bits (93), Expect = 0.001
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 6/69 (8%)
Query: 422 DLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH 481
L + + I VHC+ G RTG L IC + L + + V R
Sbjct: 130 RLCERFNERNPPELIGVHCTHGFNRTGFL----IC-AFLVEKMDWSIEAAVATFAQARPP 184
Query: 482 SIQMRDQYI 490
I + Y+
Sbjct: 185 GI-YKGDYL 192
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 41.2 bits (96), Expect = 3e-04
Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 24/117 (20%)
Query: 225 LTLC----NTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTW 280
+ +C +T +E + + + D P S + ++L L
Sbjct: 66 VRVCEATYDTTLVEKEGIHVLDWP-FDDGAPP-SNQIVDDWL------------SLVKIK 111
Query: 281 AGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 337
G I VHC AG+GR L L + + V+ IR +R +
Sbjct: 112 FREEPGCCIAVHCVAGLGRAPVLVALALIEGGM------KYEDAVQFIRQKRRGAFN 162
Score = 39.7 bits (92), Expect = 0.001
Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 6/63 (9%)
Query: 422 DLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH 481
L G I VHC AG+GR L L + + V+ IR +R
Sbjct: 106 SLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGM------KYEDAVQFIRQKRRG 159
Query: 482 SIQ 484
+
Sbjct: 160 AFN 162
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 41.9 bits (98), Expect = 3e-04
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 5/57 (8%)
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 341
I VH AG+GRTGTL + + T+ +R R S+ Q
Sbjct: 268 AEGAIAVHSKAGLGRTGTL-----IACYIMKHYRMTAAETIAWVRICRPGSVIGPQQ 319
Score = 41.9 bits (98), Expect = 3e-04
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 5/57 (8%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQ 488
I VH AG+GRTGTL + + T+ +R R S+ Q
Sbjct: 268 AEGAIAVHSKAGLGRTGTL-----IACYIMKHYRMTAAETIAWVRICRPGSVIGPQQ 319
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 40.9 bits (95), Expect = 6e-04
Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 16/81 (19%)
Query: 226 TLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGDTWAGHPR 285
+ + + Y A D+ P ++ FLA R P+
Sbjct: 169 KVQTEQEVAEAAGMRYFRIAATDHVWPTPE-NIDRFLAFYRTL---------------PQ 212
Query: 286 GPPIIVHCSAGIGRTGTLCTL 306
+ H AG+GRT +
Sbjct: 213 DAWLHFHSEAGVGRTTAFMVM 233
Score = 36.3 bits (83), Expect = 0.022
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 431 PRGPPIIVHCSAGIGRTGTLCTL 453
P+ + H AG+GRT +
Sbjct: 211 PQDAWLHFHSEAGVGRTTAFMVM 233
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 35.4 bits (82), Expect = 0.013
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 285 RGPPIIVHCSAGIGRTGTLC 304
G + VHC AG R+ T+
Sbjct: 88 LGQCVYVHCKAGRSRSATMV 107
Score = 35.4 bits (82), Expect = 0.013
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 432 RGPPIIVHCSAGIGRTGTLC 451
G + VHC AG R+ T+
Sbjct: 88 LGQCVYVHCKAGRSRSATMV 107
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 36.2 bits (82), Expect = 0.022
Identities = 26/163 (15%), Positives = 47/163 (28%), Gaps = 15/163 (9%)
Query: 191 AQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKT-LETRMVAHYQFTAWLDY 249
A +P + + + + LC+ + ET+ H D+
Sbjct: 36 AMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDH 95
Query: 250 GVPESALSMLEFLAKARHTQAALLADLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDIC 309
VP +L+F+ A W I +H G GRTGTL + +
Sbjct: 96 NVPTLVD-LLKFIDDA------------KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLL 142
Query: 310 ISRLEDSGTVDVRGTVKRIRSQRAHSIQMRDQYIFCHLALIEY 352
D+ + R+ + + + Y
Sbjct: 143 EDGKFDTAK-EALEYFGSRRTDFEVGDVFQGVETASQIRYVGY 184
Score = 32.3 bits (72), Expect = 0.40
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Query: 425 DTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 484
W I +H G GRTGTL + + D+ + R+
Sbjct: 111 KVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAK-EALEYFGSRRTDFEVGDV 169
Query: 485 MRDQYIFCHLALIEY 499
+ + + Y
Sbjct: 170 FQGVETASQIRYVGY 184
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 36.0 bits (82), Expect = 0.025
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 18/128 (14%)
Query: 219 DYVLSSLTLCNTKTLETRMVAHYQFTAWLDYGVPESALSMLEFLAKARHTQAALLADLGD 278
Y L + +T R VA Y + D+ P+ L + F + D
Sbjct: 61 IYNLCAERHYDTAKFNCR-VAQYP---FEDHNPPQLEL-IKPFC------------EDLD 103
Query: 279 TWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQM 338
W +HC AG GRTG + + + +R++ + +
Sbjct: 104 QWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQ-EALDFYGEVRTRDKKGVTI 162
Query: 339 RDQYIFCH 346
Q + +
Sbjct: 163 PSQRRYVY 170
Score = 32.9 bits (74), Expect = 0.21
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Query: 422 DLGDTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAH 481
+ D W +HC AG GRTG + + + +R++
Sbjct: 100 EDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQ-EALDFYGEVRTRDKK 158
Query: 482 SIQMRDQYIFCH 493
+ + Q + +
Sbjct: 159 GVTIPSQRRYVY 170
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 33.4 bits (75), Expect = 0.17
Identities = 9/69 (13%), Positives = 17/69 (24%), Gaps = 4/69 (5%)
Query: 278 DTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 337
W +VHC G + L L + V+ + ++R
Sbjct: 107 YNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYST----PGPAVRLLYAKRPGIGL 162
Query: 338 MRDQYIFCH 346
+
Sbjct: 163 SPSHRRYLG 171
Score = 33.4 bits (75), Expect = 0.17
Identities = 9/69 (13%), Positives = 17/69 (24%), Gaps = 4/69 (5%)
Query: 425 DTWAGHPRGPPIIVHCSAGIGRTGTLCTLDICISRLEDSGTVDVRGTVKRIRSQRAHSIQ 484
W +VHC G + L L + V+ + ++R
Sbjct: 107 YNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYST----PGPAVRLLYAKRPGIGL 162
Query: 485 MRDQYIFCH 493
+
Sbjct: 163 SPSHRRYLG 171
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 29.3 bits (65), Expect = 1.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 288 PIIVHCSAGIGRTGTLCTL 306
P+++HC G RTG L
Sbjct: 94 PVLIHCKRGKHRTGCLVGC 112
Score = 29.3 bits (65), Expect = 1.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 435 PIIVHCSAGIGRTGTLCTL 453
P+++HC G RTG L
Sbjct: 94 PVLIHCKRGKHRTGCLVGC 112
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 29.7 bits (66), Expect = 1.9
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 286 GPPIIVHCSAGIGRTGTLC 304
G VH +AG+GR +
Sbjct: 106 GGVTYVHSTAGMGRAPAVA 124
Score = 29.7 bits (66), Expect = 1.9
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 433 GPPIIVHCSAGIGRTGTLC 451
G VH +AG+GR +
Sbjct: 106 GGVTYVHSTAGMGRAPAVA 124
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 29.3 bits (66), Expect = 2.0
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 13/55 (23%)
Query: 285 RGPPIIVHCSAGIGRTGTLCTLDICIS--------RLEDSGTVDVRGTVKRIRSQ 331
R P++VH +AG+ R+G + ++ L + V +++ +R
Sbjct: 107 RNEPVLVHSAAGVNRSGA-----MILAYLMSKNKESLPMLYFLYVYHSMRDLRGA 156
Score = 29.3 bits (66), Expect = 2.0
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 13/55 (23%)
Query: 432 RGPPIIVHCSAGIGRTGTLCTLDICIS--------RLEDSGTVDVRGTVKRIRSQ 478
R P++VH +AG+ R+G + ++ L + V +++ +R
Sbjct: 107 RNEPVLVHSAAGVNRSGA-----MILAYLMSKNKESLPMLYFLYVYHSMRDLRGA 156
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural
genomics, PSI-2, protein structure initiative; HET: ADP;
2.40A {Deinococcus radiodurans R1}
Length = 405
Score = 29.7 bits (65), Expect = 2.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 378 GGHLGRAPAGAPNHRPLLGRDRAAALSMLEFLAKARYTQASLLADLGDTWAGHPRGPP 435
GG L P G R LL D + + LA AD+ W P G P
Sbjct: 303 GGSLTGVPTGLR--RELL-EDLVGLMDAVPALAGEGLELGRSSADVPGAWLALPGGRP 357
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint
center for structural genomics, JCSG; HET: MSE; 1.40A
{Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Length = 157
Score = 28.4 bits (63), Expect = 3.2
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 283 HPRGPPIIVHCSAGIGRTGTLCTL 306
+G ++VHC A R L
Sbjct: 94 QHKGKDVLVHCLANY-RASAFAYL 116
Score = 28.4 bits (63), Expect = 3.2
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 430 HPRGPPIIVHCSAGIGRTGTLCTL 453
+G ++VHC A R L
Sbjct: 94 QHKGKDVLVHCLANY-RASAFAYL 116
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 28.5 bits (64), Expect = 3.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 285 RGPPIIVHCSAGIGRTGTLC 304
R P++VHC+AG+ R+G +
Sbjct: 124 RNEPVLVHCAAGVNRSGAMI 143
Score = 28.5 bits (64), Expect = 3.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 432 RGPPIIVHCSAGIGRTGTLC 451
R P++VHC+AG+ R+G +
Sbjct: 124 RNEPVLVHCAAGVNRSGAMI 143
>1qht_A Protein (DNA polymerase); archaea, hyperthermostable, family B
polymer alpha family polymerase, transferase; 2.10A
{Thermococcus SP} SCOP: c.55.3.5 e.8.1.1 PDB: 1tgo_A
2xhb_A* 2vwj_A* 2vwk_A* 1wns_A* 1wn7_A 1qqc_A* 4ahc_A*
4ail_C* 3a2f_A* 2jgu_A* 1d5a_A
Length = 775
Score = 28.9 bits (65), Expect = 5.0
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 30 EAMKVEIEDAVK-RVRFSDDDSLHADPTGTSSSQGLSIA-EFVEAVRSKGRSGLCLEYEG 87
E + E+E+ +V ++D D LHA G + A EF++ + K L LEYEG
Sbjct: 522 EMVIRELEEKFGFKVLYADTDGLHATIPGADAETVKKKAKEFLKYINPKLPGLLELEYEG 581
Query: 88 F 88
F
Sbjct: 582 F 582
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 28.0 bits (63), Expect = 5.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 285 RGPPIIVHCSAGIGRTGTLC 304
G I+VHC+ G+ R+ TL
Sbjct: 84 PGGKILVHCAVGVSRSATLV 103
Score = 28.0 bits (63), Expect = 5.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 432 RGPPIIVHCSAGIGRTGTLC 451
G I+VHC+ G+ R+ TL
Sbjct: 84 PGGKILVHCAVGVSRSATLV 103
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 28.2 bits (63), Expect = 5.4
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 285 RGPPIIVHCSAGIGRTGTLC 304
+ I++H G+ R+ TL
Sbjct: 116 KREKILIHAQCGLSRSATLI 135
Score = 28.2 bits (63), Expect = 5.4
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 432 RGPPIIVHCSAGIGRTGTLC 451
+ I++H G+ R+ TL
Sbjct: 116 KREKILIHAQCGLSRSATLI 135
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 27.6 bits (62), Expect = 7.4
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 286 GPPIIVHCSAGIGRTGTLC 304
++VHC G R+ TL
Sbjct: 115 NGRVLVHCREGYSRSPTLV 133
Score = 27.6 bits (62), Expect = 7.4
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 433 GPPIIVHCSAGIGRTGTLC 451
++VHC G R+ TL
Sbjct: 115 NGRVLVHCREGYSRSPTLV 133
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine
protease; HET: 2AB; 1.80A {Lysobacter enzymogenes} SCOP:
d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Length = 166
Score = 27.3 bits (60), Expect = 7.4
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 395 LGRDRAAALSMLEFLAKARYTQASLLADLGDTWAG 429
LG L+ AR A++ + G +AG
Sbjct: 16 LGIFPTQLPQYLQTEKLARTQAAAIEREFGAQFAG 50
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 27.8 bits (62), Expect = 7.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 281 AGHPRGPPIIVHCSAGIGRTGTLC 304
A ++VHC+ G+ R+ TL
Sbjct: 126 ALSVPQGRVLVHCAMGVSRSATLV 149
Score = 27.8 bits (62), Expect = 7.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 428 AGHPRGPPIIVHCSAGIGRTGTLC 451
A ++VHC+ G+ R+ TL
Sbjct: 126 ALSVPQGRVLVHCAMGVSRSATLV 149
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 27.2 bits (61), Expect = 8.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 285 RGPPIIVHCSAGIGRTGTLC 304
G +++HC AG+ R+ T+
Sbjct: 82 CGKGLLIHCQAGVSRSATIV 101
Score = 27.2 bits (61), Expect = 8.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 432 RGPPIIVHCSAGIGRTGTLC 451
G +++HC AG+ R+ T+
Sbjct: 82 CGKGLLIHCQAGVSRSATIV 101
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 27.2 bits (61), Expect = 8.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 289 IIVHCSAGIGRTGTLC 304
+VH AGI R+ T+
Sbjct: 87 CLVHSFAGISRSTTIV 102
Score = 27.2 bits (61), Expect = 8.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 436 IIVHCSAGIGRTGTLC 451
+VH AGI R+ T+
Sbjct: 87 CLVHSFAGISRSTTIV 102
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.133 0.402
Gapped
Lambda K H
0.267 0.0418 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,005,752
Number of extensions: 488280
Number of successful extensions: 1525
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1340
Number of HSP's successfully gapped: 168
Length of query: 523
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 425
Effective length of database: 3,965,535
Effective search space: 1685352375
Effective search space used: 1685352375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)