Query psy15397
Match_columns 289
No_of_seqs 301 out of 1351
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 19:57:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15397.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15397hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4amj_A Beta-1 adrenergic recep 94.5 0.013 4.5E-07 51.0 2.1 112 111-225 184-303 (315)
2 4eiy_A Adenosine receptor A2A/ 94.4 0.012 4.1E-07 54.3 1.7 77 150-226 349-429 (447)
3 3pbl_A D(3) dopamine receptor, 93.5 0.0038 1.3E-07 58.3 -3.8 75 150-226 396-475 (481)
4 4ea3_A Fusion protein of nocic 92.3 0.073 2.5E-06 49.3 3.2 78 148-225 330-412 (434)
5 3sn6_R Lysozyme, beta-2 adrene 91.3 0.094 3.2E-06 49.8 2.8 75 150-226 417-494 (514)
6 2z73_A Rhodopsin; visual pigme 91.1 0.13 4.4E-06 47.6 3.4 154 69-222 152-331 (448)
7 1u19_A Rhodopsin; G protein-co 90.9 0.016 5.6E-07 51.3 -2.8 75 149-225 247-326 (349)
8 2ks9_A Substance-P receptor; w 88.7 0.043 1.5E-06 49.2 -1.9 77 148-225 241-324 (364)
9 3uon_A Human M2 muscarinic ace 88.2 0.044 1.5E-06 50.7 -2.3 74 151-225 384-460 (467)
10 3v2y_A Sphingosine 1-phosphate 87.7 0.02 6.7E-07 54.9 -5.1 73 150-225 416-495 (520)
11 4dkl_A MU-type opioid receptor 87.2 0.21 7.1E-06 45.9 1.8 72 151-223 379-456 (464)
12 3rze_A Histamine H1 receptor, 86.6 0.023 7.9E-07 52.4 -5.1 74 150-225 368-445 (452)
13 3odu_A C-X-C chemokine recepto 82.6 0.15 5E-06 47.7 -1.7 76 150-225 408-495 (502)
14 3eml_A Human adenosine A2A rec 82.3 0.47 1.6E-05 43.8 1.8 74 149-224 389-468 (488)
15 2rh1_A Beta-2-adrenergic recep 78.5 0.89 3.1E-05 42.8 2.3 73 151-225 404-479 (500)
16 2lnl_A C-X-C chemokine recepto 75.2 0.42 1.4E-05 41.4 -0.9 24 199-222 270-293 (296)
17 3vw7_A Proteinase-activated re 74.8 1.5 5.1E-05 40.4 2.7 77 151-227 386-469 (484)
18 2koe_A Human cannabinoid recep 62.4 1.9 6.6E-05 25.7 0.4 19 204-222 19-37 (40)
No 1
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=94.53 E-value=0.013 Score=50.97 Aligned_cols=112 Identities=8% Similarity=0.062 Sum_probs=53.7
Q ss_pred eeeehhHHHHHHHHHHHHHHHHHHHHHHhcccCc-----chhhHhhhhhhhhhhccccccceeeeccccc---cccchhh
Q psy15397 111 WILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHT-----TELEQLRKGVRAAIVLVPLLGITNVINMTEA---PIEHSVW 182 (289)
Q Consensus 111 ~~f~~Pv~~illiN~v~fi~i~~~l~~k~~~~~~-----~~~~~~~~~~r~~l~L~~llG~tW~~g~~~~---~~~~~~~ 182 (289)
..+..|..+++..+..++...-+.. ++.++.+. ...++.+|..|..+.++..+-+.|.-..+.. ..+++..
T Consensus 184 ~~~~ip~~ii~~~y~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~~~ 262 (315)
T 4amj_A 184 ISFYIPLLIMIFVALRVYREAKEQI-RKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLV 262 (315)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 3467888888776655444332111 11111111 1112345666666666666777776433310 0011100
Q ss_pred HHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397 183 RFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR 225 (289)
Q Consensus 183 ~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r 225 (289)
. .....+...+..+....=.++|+ .|+|.|+++++.+++.+
T Consensus 263 ~-~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~ 303 (315)
T 4amj_A 263 P-DWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPR 303 (315)
T ss_dssp C-HHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC---
T ss_pred h-HHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCC
Confidence 0 11223333344445555566778 89999999998876543
No 2
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=94.45 E-value=0.012 Score=54.26 Aligned_cols=77 Identities=9% Similarity=0.026 Sum_probs=45.6
Q ss_pred hhhhhhhhhhccccccceeeeccccc---cc-cchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397 150 LRKGVRAAIVLVPLLGITNVINMTEA---PI-EHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR 225 (289)
Q Consensus 150 ~~~~~r~~l~L~~llG~tW~~g~~~~---~~-~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r 225 (289)
.+|..|..+.++.++-+.|+-..+.. .. ++.........++...+..+...+=.++|+++|++.|+++++.+++.+
T Consensus 349 ~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~ 428 (447)
T 4eiy_A 349 EVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV 428 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHH
Confidence 34556666667777777776544310 00 000000122334445555566667778899999999999999887654
Q ss_pred c
Q psy15397 226 R 226 (289)
Q Consensus 226 ~ 226 (289)
+
T Consensus 429 ~ 429 (447)
T 4eiy_A 429 L 429 (447)
T ss_dssp -
T ss_pred h
Confidence 3
No 3
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=93.47 E-value=0.0038 Score=58.32 Aligned_cols=75 Identities=13% Similarity=0.054 Sum_probs=42.4
Q ss_pred hhhhhhhhhhccccccceeeeccccc----c-ccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhc
Q psy15397 150 LRKGVRAAIVLVPLLGITNVINMTEA----P-IEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTA 224 (289)
Q Consensus 150 ~~~~~r~~l~L~~llG~tW~~g~~~~----~-~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~ 224 (289)
.+|..|..+.++..+-+.|+-..+.. . .+... ......+...+..+....=.++|+++|++.|+++++.++++
T Consensus 396 ~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~--~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~ 473 (481)
T 3pbl_A 396 EKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHV--SPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCG 473 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC-
T ss_pred hhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccC--cHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhcc
Confidence 45666666666667777776544310 0 01011 01122333344445555667789999999999999988655
Q ss_pred cc
Q psy15397 225 RR 226 (289)
Q Consensus 225 r~ 226 (289)
|+
T Consensus 474 ~~ 475 (481)
T 3pbl_A 474 RP 475 (481)
T ss_dssp --
T ss_pred Cc
Confidence 43
No 4
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=92.26 E-value=0.073 Score=49.33 Aligned_cols=78 Identities=13% Similarity=0.034 Sum_probs=38.6
Q ss_pred hHhhhhhhhhhhccccccceeeecccc-----ccccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhh
Q psy15397 148 EQLRKGVRAAIVLVPLLGITNVINMTE-----APIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFD 222 (289)
Q Consensus 148 ~~~~~~~r~~l~L~~llG~tW~~g~~~-----~~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~ 222 (289)
++.++..|..+.++.++-+.|+-..+. ...............+...+..+...+=.++|+++|++.|+++++.++
T Consensus 330 ~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~ 409 (434)
T 4ea3_A 330 RNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCC 409 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC----
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344566677776666777777643321 000111111111222223344445556677888999999999998765
Q ss_pred hcc
Q psy15397 223 TAR 225 (289)
Q Consensus 223 ~~r 225 (289)
+++
T Consensus 410 ~~~ 412 (434)
T 4ea3_A 410 ASA 412 (434)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 5
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=91.30 E-value=0.094 Score=49.80 Aligned_cols=75 Identities=9% Similarity=0.112 Sum_probs=36.0
Q ss_pred hhhhhhhhhhccccccceeeeccccc---cccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhccc
Q psy15397 150 LRKGVRAAIVLVPLLGITNVINMTEA---PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARR 226 (289)
Q Consensus 150 ~~~~~r~~l~L~~llG~tW~~g~~~~---~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r~ 226 (289)
.++..|..+.++.++-+.|+-..+.. ..++.... .....+...+..+...+=.++|+ +|++.|+++++.++++++
T Consensus 417 ~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~-~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~~ 494 (514)
T 3sn6_R 417 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR-KEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRS 494 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSC-HHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-hHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCcc
Confidence 34556666665556666665433210 00110000 11122223333344444455677 799999999988765443
No 6
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=91.06 E-value=0.13 Score=47.64 Aligned_cols=154 Identities=11% Similarity=0.071 Sum_probs=72.1
Q ss_pred eEEEeeeccccceeeeeeeeehhccc--c-cccceeccccccc----------eeeeeehhHHHHHHHHHHHHHHHHHHH
Q psy15397 69 YCIYKVVGWGIPLIMTGLWALVTAYY--M-REERCWWGYNLTS----------FFWILEGPRLAAVSLNFLFLLNIIRVL 135 (289)
Q Consensus 69 ~~~y~l~gWG~P~liV~i~~~~~~~y--~-~~~~CWl~~~~~~----------~~~~f~~Pv~~illiN~v~fi~i~~~l 135 (289)
.....++.|.+++++..........+ + ....|+....... ....+.+|.++++..+..++..+-+.-
T Consensus 152 ~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~ 231 (448)
T 2z73_A 152 AFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHE 231 (448)
T ss_dssp HHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667877776554333221111 1 1234876532111 112356777777776666555443221
Q ss_pred HHH--hc-c-cCcc-h-----hhHhhhhhhhhhhccccccceeeeccccc---cccchhhHHHHHHHHHHHHhhhhhhhh
Q psy15397 136 VVK--LR-Q-SHTT-E-----LEQLRKGVRAAIVLVPLLGITNVINMTEA---PIEHSVWRFLLWSYTTHFLTSFQGFFV 202 (289)
Q Consensus 136 ~~k--~~-~-~~~~-~-----~~~~~~~~r~~l~L~~llG~tW~~g~~~~---~~~~~~~~~~v~~ylf~ilnslQG~fI 202 (289)
.+. .. . ++++ + .++.++..|..+.++..+-+.|+-..+.. ..+...........+...+..+...+=
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~N 311 (448)
T 2z73_A 232 KEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHN 311 (448)
T ss_dssp HHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHGGGSH
T ss_pred HHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcccCChHHHHHHHHHHHHHHhhc
Confidence 110 00 0 1110 1 11234556665555555556665332210 000000000112233334444455666
Q ss_pred hheeeeechHHHHHHHHhhh
Q psy15397 203 AVLYCFFNGEVLLSTATQFD 222 (289)
Q Consensus 203 fll~c~~n~~Vr~~~~~~~~ 222 (289)
.++|+++|++.|+++++.++
T Consensus 312 PiIY~~~~~~fR~~~~~~~~ 331 (448)
T 2z73_A 312 PMIYSVSHPKFREAISQTFP 331 (448)
T ss_dssp HHHHHHHCHHHHHHHHHHCG
T ss_pred chHHHHhhHHHHHHHHHHHH
Confidence 77888999999999998764
No 7
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=90.93 E-value=0.016 Score=51.34 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=42.1
Q ss_pred Hhhhhhhhhhhccccccceeeecccc----c-cccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhh
Q psy15397 149 QLRKGVRAAIVLVPLLGITNVINMTE----A-PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDT 223 (289)
Q Consensus 149 ~~~~~~r~~l~L~~llG~tW~~g~~~----~-~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~ 223 (289)
+.++..|..+.++..+-+.|+-..+. . ..+.+. ......+...+..+....=-++|++.|+|.|+++++.+++
T Consensus 247 ~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~--~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c 324 (349)
T 1u19_A 247 AEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDF--GPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC 324 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCC--CHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCccc--chHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcc
Confidence 34455666655555566666543221 0 001111 0122344445555566666778889999999999988754
Q ss_pred cc
Q psy15397 224 AR 225 (289)
Q Consensus 224 ~r 225 (289)
++
T Consensus 325 ~~ 326 (349)
T 1u19_A 325 GK 326 (349)
T ss_dssp SC
T ss_pred cC
Confidence 33
No 8
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=88.70 E-value=0.043 Score=49.15 Aligned_cols=77 Identities=18% Similarity=0.171 Sum_probs=41.7
Q ss_pred hHhhhhhhhhhhccccccceeeeccccc------ccc-chhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHh
Q psy15397 148 EQLRKGVRAAIVLVPLLGITNVINMTEA------PIE-HSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQ 220 (289)
Q Consensus 148 ~~~~~~~r~~l~L~~llG~tW~~g~~~~------~~~-~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~ 220 (289)
++.+|..|..+.++..+-+.|+-..+.. +.. ..... .....+...+..+....=-++|++.|+|.|+++++.
T Consensus 241 ~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~ 319 (364)
T 2ks9_A 241 SAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFI-QQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHA 319 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCC-HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3445667777766667777775332210 000 00000 011122223333444555678889999999999998
Q ss_pred hhhcc
Q psy15397 221 FDTAR 225 (289)
Q Consensus 221 ~~~~r 225 (289)
+++++
T Consensus 320 ~~~~~ 324 (364)
T 2ks9_A 320 FRCCP 324 (364)
T ss_dssp HSSSC
T ss_pred HhhcC
Confidence 86644
No 9
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=88.17 E-value=0.044 Score=50.72 Aligned_cols=74 Identities=9% Similarity=-0.065 Sum_probs=44.6
Q ss_pred hhhhhhhhhccccccceeeeccccc---cccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397 151 RKGVRAAIVLVPLLGITNVINMTEA---PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR 225 (289)
Q Consensus 151 ~~~~r~~l~L~~llG~tW~~g~~~~---~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r 225 (289)
+|.+|..+.++..+-+.|+-..+.. ...++.. ......+...+..+....=.++|+++|++.|+++++.+++++
T Consensus 384 ~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~-~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~ 460 (467)
T 3uon_A 384 KKVTRTILAILLAFIITWAPYNVMVLINTFCAPCI-PNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHY 460 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTS-CHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhccc-chHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhc
Confidence 4566676777777777776443310 0111100 122334555566677778889999999999999999875543
No 10
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=87.73 E-value=0.02 Score=54.86 Aligned_cols=73 Identities=8% Similarity=0.007 Sum_probs=38.2
Q ss_pred hhhhhhhhhhccccccceeeecccc-----c-cccc-hhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhh
Q psy15397 150 LRKGVRAAIVLVPLLGITNVINMTE-----A-PIEH-SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFD 222 (289)
Q Consensus 150 ~~~~~r~~l~L~~llG~tW~~g~~~-----~-~~~~-~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~ 222 (289)
.+|.+|..+..+.++-+.|+=..+. . ..+. ............+.+||.= =-++|+++|++.|+++++.++
T Consensus 416 ~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~---NPiiY~~~~~~fr~~~~~~~~ 492 (520)
T 3v2y_A 416 NVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGT---NPIIYTLTNKEMRRAFIRIMG 492 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGGGT---HHHHHHHHCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHH---HHHHHHHcCHHHHHHHHHHHH
Confidence 3445666666666666777532221 0 0000 0000011122344445443 345678899999999998876
Q ss_pred hcc
Q psy15397 223 TAR 225 (289)
Q Consensus 223 ~~r 225 (289)
++.
T Consensus 493 ~~~ 495 (520)
T 3v2y_A 493 RPL 495 (520)
T ss_dssp SCC
T ss_pred Hhc
Confidence 543
No 11
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=87.22 E-value=0.21 Score=45.94 Aligned_cols=72 Identities=14% Similarity=0.018 Sum_probs=42.5
Q ss_pred hhhhhhhhhccccccceeeeccccc------cccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhh
Q psy15397 151 RKGVRAAIVLVPLLGITNVINMTEA------PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDT 223 (289)
Q Consensus 151 ~~~~r~~l~L~~llG~tW~~g~~~~------~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~ 223 (289)
+|.+|..+.++.++-+.|+-..+.. ..+... .......+...+.-+....=.++|+++|+|.|+++|+-+++
T Consensus 379 ~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~-~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~ 456 (464)
T 4dkl_A 379 RRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETT-FQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP 456 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccc-cchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhcc
Confidence 5667777777777888886544311 011111 11222233333444555666778999999999999986443
No 12
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=86.63 E-value=0.023 Score=52.39 Aligned_cols=74 Identities=9% Similarity=0.002 Sum_probs=42.8
Q ss_pred hhhhhhhhhhccccccceeeecccc----ccccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397 150 LRKGVRAAIVLVPLLGITNVINMTE----APIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR 225 (289)
Q Consensus 150 ~~~~~r~~l~L~~llG~tW~~g~~~----~~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r 225 (289)
.+|..|..+.++..+-+.|+-..+. ...+.... ....++...+..+....=.++|+++|++.|+++++.+++++
T Consensus 368 ~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~~--~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~ 445 (452)
T 3rze_A 368 ERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCN--EHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRS 445 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSC--TTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccccc--HHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhcc
Confidence 3566677777777777777643321 00000000 11223444455555666778899999999999998876543
No 13
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=82.56 E-value=0.15 Score=47.69 Aligned_cols=76 Identities=16% Similarity=0.209 Sum_probs=45.2
Q ss_pred hhhhhhhhhhccccccceeeecccc----------cccc-ch-hhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHH
Q psy15397 150 LRKGVRAAIVLVPLLGITNVINMTE----------APIE-HS-VWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLST 217 (289)
Q Consensus 150 ~~~~~r~~l~L~~llG~tW~~g~~~----------~~~~-~~-~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~ 217 (289)
.+|.+|..+.++..+-+.|+-..+. ...+ .. ......+..+...+.-+....=.++|+++|+|.|+++
T Consensus 408 ~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 487 (502)
T 3odu_A 408 KRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSA 487 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHH
Confidence 3566777777777777788743320 0000 00 0011122234444555556677789999999999999
Q ss_pred HHhhhhcc
Q psy15397 218 ATQFDTAR 225 (289)
Q Consensus 218 ~~~~~~~r 225 (289)
++.+++++
T Consensus 488 ~~ll~~~~ 495 (502)
T 3odu_A 488 QHALTSGR 495 (502)
T ss_dssp HHHHSSCS
T ss_pred HHHhccCC
Confidence 99886654
No 14
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=82.26 E-value=0.47 Score=43.79 Aligned_cols=74 Identities=11% Similarity=0.082 Sum_probs=47.5
Q ss_pred Hhhhhhhhhhhccccccceeeecccc------ccccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhh
Q psy15397 149 QLRKGVRAAIVLVPLLGITNVINMTE------APIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFD 222 (289)
Q Consensus 149 ~~~~~~r~~l~L~~llG~tW~~g~~~------~~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~ 222 (289)
+.+|.+|..+.++.++-++|+=..+. .+..... .....++...+..+...+=.++|+++|++.|+++++.++
T Consensus 389 ~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~ 466 (488)
T 3eml_A 389 KEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHA--PLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIR 466 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccc--cHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHh
Confidence 34556677777777777777644331 0110011 123345555666677778888999999999999999887
Q ss_pred hc
Q psy15397 223 TA 224 (289)
Q Consensus 223 ~~ 224 (289)
++
T Consensus 467 ~~ 468 (488)
T 3eml_A 467 SH 468 (488)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 15
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=78.52 E-value=0.89 Score=42.80 Aligned_cols=73 Identities=10% Similarity=0.125 Sum_probs=39.2
Q ss_pred hhhhhhhhhccccccceeeecccccc---ccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397 151 RKGVRAAIVLVPLLGITNVINMTEAP---IEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR 225 (289)
Q Consensus 151 ~~~~r~~l~L~~llG~tW~~g~~~~~---~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r 225 (289)
+|.+|..+.++..+-+.|+=..+... ..+.... .....++..+.-+....=-++|++ |+|.|+++++-+++++
T Consensus 404 ~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~~~~-~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~~~ 479 (500)
T 2rh1_A 404 HKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR-KEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCLRR 479 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSC-HHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-HHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhhhc
Confidence 45667777777778888875443110 0000000 111222333334444455566675 9999999999875543
No 16
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=75.23 E-value=0.42 Score=41.36 Aligned_cols=24 Identities=8% Similarity=0.211 Sum_probs=19.0
Q ss_pred hhhhhheeeeechHHHHHHHHhhh
Q psy15397 199 GFFVAVLYCFFNGEVLLSTATQFD 222 (289)
Q Consensus 199 G~fIfll~c~~n~~Vr~~~~~~~~ 222 (289)
...=-++|+++|+|.|+++||-++
T Consensus 270 s~~NPiIY~~~~~~fR~~~~~ll~ 293 (296)
T 2lnl_A 270 SCLNPIIYAFIGQNFRHGFLKILA 293 (296)
T ss_dssp GTHHHHHHHHHCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhc
Confidence 344456899999999999998764
No 17
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=74.83 E-value=1.5 Score=40.44 Aligned_cols=77 Identities=5% Similarity=-0.061 Sum_probs=33.7
Q ss_pred hhhhhhhhhccccccceeeeccc----c--cc-ccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhh
Q psy15397 151 RKGVRAAIVLVPLLGITNVINMT----E--AP-IEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDT 223 (289)
Q Consensus 151 ~~~~r~~l~L~~llG~tW~~g~~----~--~~-~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~ 223 (289)
+|.+|..+.++.++-+.|+=..+ . .. .............+...+.-+....=.++|+++|++.|+++++.+++
T Consensus 386 ~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~ 465 (484)
T 3vw7_A 386 SRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCC 465 (484)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC----------
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhh
Confidence 45566667776777777763322 0 00 01111111222234444445555666788999999999999987765
Q ss_pred cccc
Q psy15397 224 ARRT 227 (289)
Q Consensus 224 ~r~~ 227 (289)
+++.
T Consensus 466 ~~~~ 469 (484)
T 3vw7_A 466 KESS 469 (484)
T ss_dssp ----
T ss_pred ccCC
Confidence 5433
No 18
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=62.44 E-value=1.9 Score=25.75 Aligned_cols=19 Identities=11% Similarity=0.322 Sum_probs=15.9
Q ss_pred heeeeechHHHHHHHHhhh
Q psy15397 204 VLYCFFNGEVLLSTATQFD 222 (289)
Q Consensus 204 ll~c~~n~~Vr~~~~~~~~ 222 (289)
++|++.|++.|+++++.++
T Consensus 19 iIY~~~~~~fr~~~~~~~~ 37 (40)
T 2koe_A 19 IIYALRSKDLRHAFRSMFP 37 (40)
T ss_dssp TTTBTTBHHHHHHHTTTCC
T ss_pred HHHHHccHHHHHHHHHHhh
Confidence 5788999999999987654
Done!