Query psy15401
Match_columns 107
No_of_seqs 104 out of 157
Neff 3.4
Searched_HMMs 29240
Date Fri Aug 16 20:04:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15401.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15401hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aui_A Calcineurin, serine/thr 99.9 4.9E-25 1.7E-29 188.0 2.2 78 8-85 412-499 (521)
2 2rqw_B 24-meric peptide from s 78.3 2.6 8.8E-05 23.2 3.2 22 82-103 3-24 (26)
3 3m50_P N.plumbaginifolia H+-tr 23.6 24 0.00083 19.9 0.7 16 8-23 6-21 (31)
4 2g6t_A Uncharacterized protein 15.6 14 0.0005 30.0 -2.0 35 27-69 173-207 (306)
5 2q5c_A NTRC family transcripti 10.6 1.3E+02 0.0043 21.5 1.9 26 28-65 161-186 (196)
6 2kxc_B ESPF-like protein; IRTK 10.1 1.7E+02 0.0059 17.8 2.1 9 37-45 6-14 (48)
7 2i88_A Colicin-E1; protein-mem 7.8 1.5E+02 0.0051 22.5 1.4 12 50-61 49-60 (191)
8 1j34_C Coagulation factor IX; 7.7 1.5E+02 0.0051 17.8 1.1 10 53-62 22-31 (46)
9 3tkz_A Tyrosine-protein phosph 7.3 1.4E+02 0.0048 18.8 0.9 15 7-21 13-27 (109)
10 1lqv_C Vitamin-K dependent pro 7.3 1.6E+02 0.0056 16.6 1.1 10 53-62 21-30 (33)
No 1
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=99.90 E-value=4.9e-25 Score=187.97 Aligned_cols=78 Identities=67% Similarity=0.996 Sum_probs=18.0
Q ss_pred chhhcchhhhhhhcCCCCCCCCCcccccChHHH----------HHHhhcCCCCccccchHHHhhhhhhhhcCCCCCCCCC
Q psy15401 8 SPVEESESVLQLKGLTPTGSLPLGALSGGKTSL----------KNALQGFSPNHKITSFAEAKGLDAINERMPPRKDAPP 77 (107)
Q Consensus 8 vLREEsEsVleLKgltP~G~LP~G~Ls~G~e~L----------k~al~gf~~~~~I~sFe~AR~~D~~NErmPp~~~~~~ 77 (107)
|||||+|+|++|||+||+|+||+|+|++|+++| ++||++|.+.|+|++|++||++|++||||||+.+...
T Consensus 412 ~lr~e~e~~~~lk~~~~~~~~p~g~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ne~~p~~~~~~~ 491 (521)
T 1aui_A 412 VLREESESVLTLKGLTPTGMLPSGVLSGGKQTLQSATVEAIEADEAIKGFSPQHKITSFEEAKGLDRINERMPPRRDAMP 491 (521)
T ss_dssp ---------------------------------------------------------CHHHHHHHHGGGGSCCCC-----
T ss_pred HHHHHHhhHHHHhcCCCCCCCCcccccCChhhhcccccchhhHHhhhcccCcccccccHHHHhhhhHHHhcCCCCccccc
Confidence 899999999999999999999999999999999 8899999999999999999999999999999999888
Q ss_pred CCCCCCCC
Q psy15401 78 TPSPVTED 85 (107)
Q Consensus 78 ~~~~~~~~ 85 (107)
+.+...+.
T Consensus 492 ~~~~~~~~ 499 (521)
T 1aui_A 492 SDANLNSI 499 (521)
T ss_dssp --------
T ss_pred cccccccc
Confidence 76654443
No 2
>2rqw_B 24-meric peptide from serine/threonine-protein KI STE20; BEM1P, STE20P, SH3CI, PRR, cytoplasm, cytoskeleton, SH3 DOMA cycle; NMR {Saccharomyces cerevisiae}
Probab=78.34 E-value=2.6 Score=23.20 Aligned_cols=22 Identities=41% Similarity=0.510 Sum_probs=17.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC
Q psy15401 82 VTEDKPPPSLPKDPPPSSNTNS 103 (107)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ 103 (107)
++.+|-||+||+.-||.+.+.|
T Consensus 3 ~~~eKFiPsRPAPKPP~s~t~s 24 (26)
T 2rqw_B 3 SANGKFIPSRPAPKPPSSASAS 24 (26)
T ss_dssp CCCCSSCCSSCCCCCSSCSCCC
T ss_pred ccccccccCCCCCCCCCCCccc
Confidence 4567999999998888776655
No 3
>3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P*
Probab=23.64 E-value=24 Score=19.90 Aligned_cols=16 Identities=38% Similarity=0.528 Sum_probs=13.1
Q ss_pred chhhcchhhhhhhcCC
Q psy15401 8 SPVEESESVLQLKGLT 23 (107)
Q Consensus 8 vLREEsEsVleLKglt 23 (107)
.||-.-|+|.+|||+-
T Consensus 6 TLkghvESv~KLKglD 21 (31)
T 3m50_P 6 TLKGHVEAVVKLKGLD 21 (31)
T ss_dssp CHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 4666779999999986
No 4
>2g6t_A Uncharacterized protein, homolog HI1244 from haemophilus influenzae; hypothetical protein, structural genomics, PSI; 3.00A {Clostridium acetobutylicum} SCOP: c.147.1.1
Probab=15.62 E-value=14 Score=30.03 Aligned_cols=35 Identities=34% Similarity=0.533 Sum_probs=20.6
Q ss_pred CCCCcccccChHHHHHHhhcCCCCccccchHHHhhhhhhhhcC
Q psy15401 27 SLPLGALSGGKTSLKNALQGFSPNHKITSFAEAKGLDAINERM 69 (107)
Q Consensus 27 ~LP~G~Ls~G~e~Lk~al~gf~~~~~I~sFe~AR~~D~~NErm 69 (107)
.-|.|.|..|...|+=-+-. =++|++|+ +++++|+
T Consensus 173 ~YPVG~L~~~~~DIeIhFlH------Y~sfeEAk--~KW~~R~ 207 (306)
T 2g6t_A 173 TMPKGSLGTGDNKIILNFNH------QASFAEAK--NDWDERK 207 (306)
T ss_dssp BCCEEEECCSTTCEEEEECS------CSSHHHHH--HHHHHHG
T ss_pred CCceEEccCCCCCeEEEEEe------cCCHHHHH--HHHHHHH
Confidence 46899997663333311122 26999997 4555554
No 5
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=10.61 E-value=1.3e+02 Score=21.49 Aligned_cols=26 Identities=31% Similarity=0.387 Sum_probs=18.3
Q ss_pred CCCcccccChHHHHHHhhcCCCCccccchHHHhhhhhh
Q psy15401 28 LPLGALSGGKTSLKNALQGFSPNHKITSFAEAKGLDAI 65 (107)
Q Consensus 28 LP~G~Ls~G~e~Lk~al~gf~~~~~I~sFe~AR~~D~~ 65 (107)
||.-++..|.++|.+|| ++|+++-..
T Consensus 161 l~~vli~sg~eSI~~Ai------------~eA~~l~~~ 186 (196)
T 2q5c_A 161 LYGETINSGEESLRRAI------------EEALNLIEV 186 (196)
T ss_dssp CEEEECCCCHHHHHHHH------------HHHHHHHHH
T ss_pred CcEEEEecCHHHHHHHH------------HHHHHHHHH
Confidence 44556677899999875 788776544
No 6
>2kxc_B ESPF-like protein; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Escherichia coli}
Probab=10.07 E-value=1.7e+02 Score=17.80 Aligned_cols=9 Identities=22% Similarity=0.213 Sum_probs=4.9
Q ss_pred hHHHHHHhh
Q psy15401 37 KTSLKNALQ 45 (107)
Q Consensus 37 ~e~Lk~al~ 45 (107)
.++|++-|.
T Consensus 6 aQaLk~HLA 14 (48)
T 2kxc_B 6 AQRLMQHLA 14 (48)
T ss_pred HHHHHHHHH
Confidence 456666554
No 7
>2i88_A Colicin-E1; protein-membrane interactions, toxin-membrane interactions, toxin structure, voltage-gated channel, membrane protein; 2.50A {Escherichia coli}
Probab=7.79 E-value=1.5e+02 Score=22.50 Aligned_cols=12 Identities=33% Similarity=0.340 Sum_probs=10.2
Q ss_pred CccccchHHHhh
Q psy15401 50 NHKITSFAEAKG 61 (107)
Q Consensus 50 ~~~I~sFe~AR~ 61 (107)
+++|+++++|.+
T Consensus 49 GKkIRs~ddAl~ 60 (191)
T 2i88_A 49 GKKIGNVNEALA 60 (191)
T ss_dssp TCCCCCHHHHHH
T ss_pred CCccCCHHHHHH
Confidence 688999999954
No 8
>1j34_C Coagulation factor IX; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Bos taurus} SCOP: g.32.1.1 PDB: 1j35_C* 1cfh_A 1cfi_A* 1mgx_A 1iod_G*
Probab=7.72 E-value=1.5e+02 Score=17.80 Aligned_cols=10 Identities=40% Similarity=0.544 Sum_probs=8.6
Q ss_pred ccchHHHhhh
Q psy15401 53 ITSFAEAKGL 62 (107)
Q Consensus 53 I~sFe~AR~~ 62 (107)
|.+|++||.+
T Consensus 22 ~Cs~EEArEv 31 (46)
T 1j34_C 22 KCSFEEAREV 31 (46)
T ss_dssp CCCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 7899999965
No 9
>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A
Probab=7.32 E-value=1.4e+02 Score=18.80 Aligned_cols=15 Identities=27% Similarity=0.257 Sum_probs=11.7
Q ss_pred cchhhcchhhhhhhc
Q psy15401 7 LSPVEESESVLQLKG 21 (107)
Q Consensus 7 ~vLREEsEsVleLKg 21 (107)
.+=|+|+|.++.-++
T Consensus 13 ~isr~~Ae~lL~~~~ 27 (109)
T 3tkz_A 13 NITGVEAENLLLTRG 27 (109)
T ss_dssp TCCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHhcCC
Confidence 356999999887765
No 10
>1lqv_C Vitamin-K dependent protein C; GLA (gamma-carboxyglutamic acid) residues, phospholipid BIND groove, Ca ION binding, blood clotting; HET: CGU NAG NDG PTY; 1.60A {Homo sapiens} SCOP: g.32.1.1 PDB: 3jtc_C*
Probab=7.30 E-value=1.6e+02 Score=16.59 Aligned_cols=10 Identities=50% Similarity=0.740 Sum_probs=8.2
Q ss_pred ccchHHHhhh
Q psy15401 53 ITSFAEAKGL 62 (107)
Q Consensus 53 I~sFe~AR~~ 62 (107)
|.+|++||.+
T Consensus 21 ~Cs~EEarEv 30 (33)
T 1lqv_C 21 ICDFEEAKEI 30 (33)
T ss_dssp CCCHHHHHHH
T ss_pred hCCHHHHHHH
Confidence 7899999864
Done!