Query         psy15406
Match_columns 134
No_of_seqs    126 out of 1883
Neff          10.6
Searched_HMMs 46136
Date          Fri Aug 16 20:12:32 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy15406.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15406hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0595|consensus               99.9 1.2E-24 2.6E-29  148.8  10.9   91   38-129    55-145 (429)
  2 KOG0615|consensus               99.9 2.2E-23 4.7E-28  143.0   9.6   89   40-129   224-312 (475)
  3 KOG0592|consensus               99.9   3E-23 6.6E-28  146.2  10.0  112   20-134   103-215 (604)
  4 KOG0598|consensus               99.9 2.5E-23 5.4E-28  140.7   9.2  117   15-134    50-166 (357)
  5 KOG0575|consensus               99.9   5E-23 1.1E-27  146.5  10.2   96   38-134    64-159 (592)
  6 KOG0581|consensus               99.9 3.6E-23 7.9E-28  140.0   8.9   94   40-134   125-220 (364)
  7 KOG0611|consensus               99.9 4.6E-23 9.9E-28  142.1   8.5   95   39-134   100-194 (668)
  8 KOG0616|consensus               99.9 1.7E-22 3.7E-27  133.8  10.1  114   18-134    72-185 (355)
  9 KOG0610|consensus               99.9 1.6E-22 3.6E-27  138.7  10.2  100   34-133   119-219 (459)
 10 KOG0600|consensus               99.9 1.5E-22 3.2E-27  141.8   9.4   95   39-134   163-259 (560)
 11 KOG0192|consensus               99.9 2.8E-22 6.1E-27  139.2   9.8   99   10-134    83-185 (362)
 12 KOG0582|consensus               99.9 4.4E-22 9.6E-27  137.8  10.6   95   40-134    72-167 (516)
 13 KOG0583|consensus               99.9 3.3E-22 7.2E-27  139.5   9.8   96   38-134    65-162 (370)
 14 KOG0605|consensus               99.9 1.4E-21   3E-26  137.6   9.0   98   36-134   185-282 (550)
 15 KOG0197|consensus               99.9 1.5E-21 3.3E-26  137.0   8.4  101    8-134   243-344 (468)
 16 KOG0198|consensus               99.9 5.9E-21 1.3E-25  129.7  10.7   96   39-134    61-159 (313)
 17 KOG0593|consensus               99.9 3.8E-21 8.3E-26  128.1   8.9  101    7-134    42-142 (396)
 18 KOG0591|consensus               99.8 4.3E-21 9.2E-26  126.8   8.0  103    7-134    59-169 (375)
 19 KOG0661|consensus               99.8 2.9E-21 6.2E-26  134.6   7.3   92   42-134    58-151 (538)
 20 KOG0585|consensus               99.8 6.5E-21 1.4E-25  133.1   8.0   94   39-134   155-251 (576)
 21 KOG1187|consensus               99.8 8.4E-21 1.8E-25  132.2   8.4   99   10-134   115-218 (361)
 22 KOG0659|consensus               99.8   2E-20 4.3E-25  122.5   8.4   95   39-134    48-142 (318)
 23 KOG0599|consensus               99.8 7.2E-21 1.6E-25  125.6   6.0   95   39-134    69-164 (411)
 24 cd05629 STKc_NDR_like_fungal C  99.8 3.5E-20 7.7E-25  130.0  10.0   96   38-134    47-142 (377)
 25 KOG0578|consensus               99.8 1.8E-20 3.9E-25  132.7   8.0   96   11-134   315-410 (550)
 26 cd05064 PTKc_EphR_A10 Catalyti  99.8   5E-20 1.1E-24  123.6   9.9   94   41-134    55-148 (266)
 27 PTZ00426 cAMP-dependent protei  99.8 5.4E-20 1.2E-24  127.6  10.1   95   39-134    78-172 (340)
 28 cd05571 STKc_PKB Catalytic dom  99.8 5.1E-20 1.1E-24  126.8   9.7   95   39-134    42-136 (323)
 29 cd05595 STKc_PKB_beta Catalyti  99.8 6.9E-20 1.5E-24  126.2  10.2   94   40-134    43-136 (323)
 30 cd05626 STKc_LATS2 Catalytic d  99.8 6.2E-20 1.3E-24  128.9   9.8   96   38-134    47-142 (381)
 31 cd05612 STKc_PRKX_like Catalyt  99.8 6.1E-20 1.3E-24  124.7   9.5   91   43-134    52-142 (291)
 32 KOG0194|consensus               99.8 2.2E-20 4.8E-25  132.4   7.5  102    7-134   202-303 (474)
 33 cd05625 STKc_LATS1 Catalytic d  99.8 6.3E-20 1.4E-24  128.9   9.8   96   38-134    47-142 (382)
 34 KOG0594|consensus               99.8 1.3E-19 2.9E-24  122.2  10.8   95   39-134    57-161 (323)
 35 PTZ00263 protein kinase A cata  99.8 6.3E-20 1.4E-24  126.6   9.5   95   39-134    65-159 (329)
 36 cd05599 STKc_NDR_like Catalyti  99.8 6.2E-20 1.3E-24  128.1   9.3   96   38-134    47-142 (364)
 37 cd05593 STKc_PKB_gamma Catalyt  99.8 7.6E-20 1.7E-24  126.2   9.7   94   40-134    43-136 (328)
 38 cd05585 STKc_YPK1_like Catalyt  99.8 8.1E-20 1.8E-24  125.2   9.6   95   39-134    40-134 (312)
 39 cd05628 STKc_NDR1 Catalytic do  99.8 7.3E-20 1.6E-24  127.8   9.5   96   38-134    47-142 (363)
 40 KOG0663|consensus               99.8   3E-20 6.6E-25  125.1   7.0   93   41-134   124-218 (419)
 41 PTZ00267 NIMA-related protein   99.8 1.2E-19 2.5E-24  130.9  10.5   95   40-134   113-210 (478)
 42 cd05584 STKc_p70S6K Catalytic   99.8 1.8E-19   4E-24  124.0  10.5   95   39-134    47-141 (323)
 43 KOG0589|consensus               99.8   4E-20 8.6E-25  129.2   7.2   98   37-134    48-147 (426)
 44 cd05084 PTKc_Fes Catalytic dom  99.8 2.4E-19 5.2E-24  119.1  10.6   95   40-134    41-135 (252)
 45 cd05621 STKc_ROCK2 Catalytic d  99.8 1.2E-19 2.7E-24  127.1   9.4   93   40-134    91-183 (370)
 46 cd05598 STKc_LATS Catalytic do  99.8 2.2E-19 4.8E-24  125.9  10.6   96   38-134    47-142 (376)
 47 KOG0588|consensus               99.8 7.1E-20 1.5E-24  132.1   8.1   95   39-134    59-153 (786)
 48 cd05582 STKc_RSK_N N-terminal   99.8 1.9E-19   4E-24  123.7   9.8   95   39-134    45-139 (318)
 49 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.8 3.1E-19 6.7E-24  120.3  10.4   92   39-130    63-154 (274)
 50 cd05594 STKc_PKB_alpha Catalyt  99.8 3.3E-19   7E-24  122.9  10.7   94   40-134    43-137 (325)
 51 KOG0579|consensus               99.8 1.4E-19 3.1E-24  130.9   9.1  107    2-134    65-171 (1187)
 52 cd05096 PTKc_DDR1 Catalytic do  99.8 2.9E-19 6.4E-24  121.9  10.2   95   40-134    67-179 (304)
 53 cd05596 STKc_ROCK Catalytic do  99.8   2E-19 4.4E-24  126.0   9.6   93   40-134    91-183 (370)
 54 KOG0608|consensus               99.8 4.2E-19 9.1E-24  128.2  11.3  117   15-134   654-770 (1034)
 55 KOG0597|consensus               99.8 2.2E-19 4.8E-24  128.0   9.6   98    9-134    44-141 (808)
 56 cd05600 STKc_Sid2p_Dbf2p Catal  99.8 2.9E-19 6.3E-24  123.4  10.0   95   39-134    48-142 (333)
 57 KOG0658|consensus               99.8 7.8E-21 1.7E-25  128.7   2.0   93   41-134    66-167 (364)
 58 cd05601 STKc_CRIK Catalytic do  99.8 4.2E-19   9E-24  122.5  10.6   96   39-134    48-143 (330)
 59 cd05597 STKc_DMPK_like Catalyt  99.8 2.7E-19 5.7E-24  123.6   9.3   96   39-134    48-143 (331)
 60 KOG0580|consensus               99.8 3.7E-20   8E-25  119.6   4.5   95   40-134    70-165 (281)
 61 cd06611 STKc_SLK_like Catalyti  99.8 4.6E-19 9.9E-24  119.5  10.1   94   41-134    51-144 (280)
 62 cd05114 PTKc_Tec_Rlk Catalytic  99.8 6.8E-19 1.5E-23  117.3  10.7   94   41-134    48-141 (256)
 63 KOG0584|consensus               99.8 8.4E-19 1.8E-23  125.6  11.7  123    4-134    60-187 (632)
 64 cd05608 STKc_GRK1 Catalytic do  99.8   4E-19 8.6E-24  120.1   9.3   96   39-134    40-138 (280)
 65 cd05066 PTKc_EphR_A Catalytic   99.8 6.4E-19 1.4E-23  118.1  10.2   95   40-134    53-147 (267)
 66 cd05627 STKc_NDR2 Catalytic do  99.8 6.7E-19 1.5E-23  122.8  10.6   96   38-134    47-142 (360)
 67 cd05042 PTKc_Aatyk Catalytic d  99.8 4.7E-19   1E-23  118.8   9.5   94   41-134    44-141 (269)
 68 cd05622 STKc_ROCK1 Catalytic d  99.8 4.4E-19 9.6E-24  124.3   9.6   93   40-134    91-183 (371)
 69 cd08227 PK_STRAD_alpha Pseudok  99.8 1.7E-18 3.7E-23  119.4  12.2   95   39-133    46-141 (327)
 70 cd06643 STKc_SLK Catalytic dom  99.8 1.4E-18 3.1E-23  117.3  11.6   94   41-134    51-144 (282)
 71 cd07869 STKc_PFTAIRE1 Catalyti  99.8 5.2E-19 1.1E-23  120.7   9.1   94   40-134    51-144 (303)
 72 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.8 1.5E-18 3.3E-23  115.9  11.1   93   39-131    46-138 (258)
 73 cd05588 STKc_aPKC Catalytic do  99.8 7.7E-19 1.7E-23  121.2   9.9   94   40-134    43-137 (329)
 74 cd05033 PTKc_EphR Catalytic do  99.8 1.6E-18 3.5E-23  116.1  11.2   94   41-134    54-147 (266)
 75 cd05573 STKc_ROCK_NDR_like Cat  99.8 6.7E-19 1.5E-23  122.2   9.5   94   40-134    49-142 (350)
 76 cd07871 STKc_PCTAIRE3 Catalyti  99.8   1E-18 2.2E-23  118.5  10.2   94   40-134    51-144 (288)
 77 cd05624 STKc_MRCK_beta Catalyt  99.8 7.5E-19 1.6E-23  121.4   9.6   95   40-134    49-143 (331)
 78 cd05065 PTKc_EphR_B Catalytic   99.8 1.2E-18 2.6E-23  116.9  10.2   95   40-134    53-147 (269)
 79 cd05113 PTKc_Btk_Bmx Catalytic  99.8   1E-18 2.2E-23  116.6   9.6   95   40-134    47-141 (256)
 80 cd05086 PTKc_Aatyk2 Catalytic   99.8   2E-18 4.2E-23  115.9  11.1   89   46-134    49-140 (268)
 81 cd05102 PTKc_VEGFR3 Catalytic   99.8 1.2E-18 2.6E-23  120.5  10.3   96   39-134    57-215 (338)
 82 cd05037 PTK_Jak_rpt1 Pseudokin  99.8 2.3E-18 4.9E-23  114.7  11.1   89   41-130    50-138 (259)
 83 cd06650 PKc_MEK1 Catalytic dom  99.8 2.2E-18 4.8E-23  119.2  11.3   94   40-134    51-145 (333)
 84 cd08216 PK_STRAD Pseudokinase   99.8   3E-18 6.5E-23  117.3  11.7  100    9-134    42-142 (314)
 85 cd05614 STKc_MSK2_N N-terminal  99.8 1.6E-18 3.4E-23  119.7  10.3   95   39-134    51-146 (332)
 86 cd05618 STKc_aPKC_iota Catalyt  99.8 1.5E-18 3.3E-23  119.8  10.2   94   40-134    43-137 (329)
 87 cd05631 STKc_GRK4 Catalytic do  99.8 6.9E-19 1.5E-23  119.2   8.3   95   40-134    48-143 (285)
 88 cd05088 PTKc_Tie2 Catalytic do  99.8 1.7E-18 3.7E-23  118.2  10.2   95   40-134    55-165 (303)
 89 cd06644 STKc_STK10_LOK Catalyt  99.8 2.3E-18 4.9E-23  116.9  10.7   95   40-134    57-151 (292)
 90 cd05603 STKc_SGK2 Catalytic do  99.8 1.4E-18   3E-23  119.5   9.8   89   45-134    49-137 (321)
 91 cd05115 PTKc_Zap-70 Catalytic   99.8 1.5E-18 3.3E-23  115.9   9.7   95   39-134    42-136 (257)
 92 cd06649 PKc_MEK2 Catalytic dom  99.8 2.5E-18 5.5E-23  118.7  11.0   95   39-134    50-145 (331)
 93 cd05590 STKc_nPKC_eta Catalyti  99.8 1.7E-18 3.7E-23  119.2  10.1   93   41-134    44-137 (320)
 94 cd05591 STKc_nPKC_epsilon Cata  99.8 1.7E-18 3.8E-23  119.1  10.1   94   40-134    43-137 (321)
 95 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.8   2E-18 4.4E-23  116.5  10.3   95   40-134    53-149 (284)
 96 cd05077 PTK_Jak1_rpt1 Pseudoki  99.8   2E-18 4.4E-23  115.6  10.1   92   39-130    51-142 (262)
 97 cd05605 STKc_GRK4_like Catalyt  99.8 1.1E-18 2.4E-23  118.2   8.9   95   40-134    48-143 (285)
 98 cd06613 STKc_MAP4K3_like Catal  99.8   5E-18 1.1E-22  113.2  11.9   96   39-134    47-142 (262)
 99 cd05052 PTKc_Abl Catalytic dom  99.8 3.9E-18 8.4E-23  114.1  11.3   92   43-134    53-145 (263)
100 cd08221 STKc_Nek9 Catalytic do  99.8 2.7E-18 5.8E-23  114.3  10.3   95   40-134    47-142 (256)
101 cd05617 STKc_aPKC_zeta Catalyt  99.8 1.9E-18 4.1E-23  119.2   9.7   94   40-134    43-137 (327)
102 cd08529 STKc_FA2-like Catalyti  99.8   5E-18 1.1E-22  112.8  11.5   95   40-134    47-142 (256)
103 cd05079 PTKc_Jak1_rpt2 Catalyt  99.8 2.8E-18 6.2E-23  116.0  10.4   97   38-134    52-150 (284)
104 cd05046 PTK_CCK4 Pseudokinase   99.8 2.7E-18 5.8E-23  115.4  10.2   95   40-134    56-158 (275)
105 cd05604 STKc_SGK3 Catalytic do  99.8 2.3E-18 4.9E-23  118.7  10.0   89   45-134    49-137 (325)
106 PF07714 Pkinase_Tyr:  Protein   99.8 1.4E-18 3.1E-23  116.2   8.8  100    9-134    44-144 (259)
107 KOG0574|consensus               99.8 7.5E-19 1.6E-23  117.7   7.2  102    7-134    69-170 (502)
108 cd05093 PTKc_TrkB Catalytic do  99.8 4.3E-18 9.3E-23  115.4  11.1   95   40-134    55-161 (288)
109 cd05104 PTKc_Kit Catalytic dom  99.8 1.6E-18 3.5E-23  121.6   9.2   95   40-134    86-255 (375)
110 cd05623 STKc_MRCK_alpha Cataly  99.8 3.2E-18 6.9E-23  118.3  10.3   95   40-134    49-143 (332)
111 cd05106 PTKc_CSF-1R Catalytic   99.8 1.7E-18 3.6E-23  121.6   9.0   96   39-134    88-253 (374)
112 cd05085 PTKc_Fer Catalytic dom  99.8 4.5E-18 9.7E-23  112.9  10.5   95   40-134    40-134 (250)
113 cd05589 STKc_PKN Catalytic dom  99.8 2.5E-18 5.3E-23  118.5   9.5   90   43-134    53-142 (324)
114 KOG4250|consensus               99.8 2.2E-18 4.9E-23  124.9   9.6  102    7-128    52-155 (732)
115 cd05089 PTKc_Tie1 Catalytic do  99.8 7.3E-18 1.6E-22  114.7  11.7   95   40-134    50-160 (297)
116 cd07848 STKc_CDKL5 Catalytic d  99.8   2E-18 4.2E-23  116.8   8.8   93   41-134    49-141 (287)
117 cd05094 PTKc_TrkC Catalytic do  99.8 4.8E-18   1E-22  115.3  10.6   95   40-134    55-164 (291)
118 KOG0586|consensus               99.8   2E-18 4.3E-23  123.4   9.0   95   39-134   102-196 (596)
119 cd05047 PTKc_Tie Catalytic dom  99.8 4.6E-18 9.9E-23  114.2  10.2   94   41-134    44-153 (270)
120 cd05068 PTKc_Frk_like Catalyti  99.8   5E-18 1.1E-22  113.4  10.2   95   40-134    49-144 (261)
121 cd05580 STKc_PKA Catalytic dom  99.8 4.5E-18 9.8E-23  115.3  10.1   96   38-134    47-142 (290)
122 cd05148 PTKc_Srm_Brk Catalytic  99.8 7.7E-18 1.7E-22  112.4  11.1   93   42-134    52-145 (261)
123 KOG0193|consensus               99.8 8.3E-19 1.8E-23  125.4   6.6  102    6-134   428-529 (678)
124 cd05570 STKc_PKC Catalytic dom  99.8 4.4E-18 9.6E-23  117.0  10.1   94   40-134    43-137 (318)
125 cd00192 PTKc Catalytic domain   99.8 6.8E-18 1.5E-22  112.2  10.7   95   40-134    44-146 (262)
126 cd05040 PTKc_Ack_like Catalyti  99.8 8.2E-18 1.8E-22  112.0  11.1   96   38-134    42-138 (257)
127 cd05059 PTKc_Tec_like Catalyti  99.8 6.3E-18 1.4E-22  112.7  10.4   95   40-134    47-141 (256)
128 cd05575 STKc_SGK Catalytic dom  99.8 5.6E-18 1.2E-22  116.7  10.4   89   45-134    49-137 (323)
129 KOG4721|consensus               99.8 3.8E-18 8.2E-23  122.1   9.7   95   39-134   159-253 (904)
130 cd05607 STKc_GRK7 Catalytic do  99.8 6.9E-18 1.5E-22  113.9  10.7   95   40-134    41-136 (277)
131 cd05592 STKc_nPKC_theta_delta   99.8 4.8E-18   1E-22  116.7  10.0   91   43-134    46-137 (316)
132 cd06615 PKc_MEK Catalytic doma  99.8 6.1E-18 1.3E-22  115.7  10.5   95   39-134    46-141 (308)
133 cd07872 STKc_PCTAIRE2 Catalyti  99.8 3.8E-18 8.3E-23  116.7   9.5   94   40-134    52-145 (309)
134 cd07859 STKc_TDY_MAPK_plant Ca  99.8 3.2E-18   7E-23  118.1   9.1   92   41-134    48-144 (338)
135 PHA02988 hypothetical protein;  99.8 5.2E-18 1.1E-22  114.9   9.9   94   40-134    66-164 (283)
136 cd05055 PTKc_PDGFR Catalytic d  99.8 7.4E-18 1.6E-22  115.1  10.7   95   40-134    86-182 (302)
137 cd05097 PTKc_DDR_like Catalyti  99.8 5.1E-18 1.1E-22  115.3   9.9   95   40-134    65-170 (295)
138 cd05090 PTKc_Ror1 Catalytic do  99.8 6.7E-18 1.5E-22  114.0  10.4   96   39-134    54-165 (283)
139 cd08229 STKc_Nek7 Catalytic do  99.8 1.1E-17 2.4E-22  111.9  11.2   94   41-134    51-147 (267)
140 cd05602 STKc_SGK1 Catalytic do  99.8 6.5E-18 1.4E-22  116.4  10.3   89   45-134    49-137 (325)
141 cd06625 STKc_MEKK3_like Cataly  99.8   6E-18 1.3E-22  112.9   9.9   96   38-134    50-145 (263)
142 cd08219 STKc_Nek3 Catalytic do  99.8 1.4E-17   3E-22  110.8  11.6   96   39-134    45-141 (255)
143 KOG0660|consensus               99.8 1.5E-18 3.3E-23  117.4   6.9   95   38-134    67-166 (359)
144 cd05095 PTKc_DDR2 Catalytic do  99.8 8.4E-18 1.8E-22  114.3  10.7   95   40-134    67-171 (296)
145 cd05101 PTKc_FGFR2 Catalytic d  99.8 1.1E-17 2.4E-22  114.1  11.3   96   39-134    67-178 (304)
146 cd05063 PTKc_EphR_A2 Catalytic  99.8   6E-18 1.3E-22  113.3   9.8   95   40-134    54-148 (268)
147 cd05620 STKc_nPKC_delta Cataly  99.8 5.7E-18 1.2E-22  116.4   9.9   94   40-134    43-137 (316)
148 PLN00034 mitogen-activated pro  99.8 2.9E-18 6.3E-23  119.4   8.5   90   40-134   120-209 (353)
149 KOG1989|consensus               99.8 1.2E-18 2.5E-23  128.4   6.7  110    5-134    73-187 (738)
150 cd06658 STKc_PAK5 Catalytic do  99.8 6.3E-18 1.4E-22  114.9   9.8   98    9-134    62-159 (292)
151 cd05080 PTKc_Tyk2_rpt2 Catalyt  99.8 9.8E-18 2.1E-22  113.2  10.5   93   40-134    54-148 (283)
152 PHA03212 serine/threonine kina  99.8 1.2E-17 2.6E-22  117.9  11.3   94   39-134   130-223 (391)
153 cd06624 STKc_ASK Catalytic dom  99.8 8.7E-18 1.9E-22  112.6  10.1   94   40-133    53-149 (268)
154 KOG0033|consensus               99.8 6.1E-18 1.3E-22  110.3   8.9   92   36-128    54-145 (355)
155 cd08228 STKc_Nek6 Catalytic do  99.8 1.3E-17 2.7E-22  111.7  10.9   94   41-134    51-147 (267)
156 cd05048 PTKc_Ror Catalytic Dom  99.8 1.2E-17 2.6E-22  112.7  10.9   95   40-134    56-165 (283)
157 cd05057 PTKc_EGFR_like Catalyt  99.8   1E-17 2.2E-22  113.0  10.4   94   40-134    57-150 (279)
158 cd08226 PK_STRAD_beta Pseudoki  99.8 7.3E-18 1.6E-22  116.3   9.9   95   39-133    46-141 (328)
159 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.8 7.5E-18 1.6E-22  113.1   9.8   96   39-134    42-141 (269)
160 cd05105 PTKc_PDGFR_alpha Catal  99.8 7.1E-18 1.5E-22  119.3  10.0   95   40-134    88-278 (400)
161 cd05587 STKc_cPKC Catalytic do  99.8 7.1E-18 1.5E-22  116.2   9.8   94   40-134    48-142 (324)
162 cd05092 PTKc_TrkA Catalytic do  99.8 1.1E-17 2.3E-22  113.0  10.5   95   40-134    55-163 (280)
163 cd05053 PTKc_FGFR Catalytic do  99.8 8.1E-18 1.8E-22  114.1   9.9   95   40-134    63-173 (293)
164 cd05108 PTKc_EGFR Catalytic do  99.8 6.1E-18 1.3E-22  116.1   9.4   94   40-134    57-150 (316)
165 cd05578 STKc_Yank1 Catalytic d  99.8 7.4E-18 1.6E-22  112.4   9.5   99    9-134    43-141 (258)
166 cd06645 STKc_MAP4K3 Catalytic   99.8 1.1E-17 2.5E-22  111.9  10.2   94   40-134    54-147 (267)
167 PHA03207 serine/threonine kina  99.8 4.3E-18 9.3E-23  120.1   8.5   93   40-134   134-226 (392)
168 cd05051 PTKc_DDR Catalytic dom  99.8 9.7E-18 2.1E-22  113.8  10.0   95   40-134    67-171 (296)
169 cd05619 STKc_nPKC_theta Cataly  99.8 9.7E-18 2.1E-22  115.2  10.1   93   41-134    44-137 (316)
170 cd05062 PTKc_IGF-1R Catalytic   99.8 1.1E-17 2.4E-22  112.6  10.2   95   40-134    57-160 (277)
171 cd05609 STKc_MAST Catalytic do  99.8 1.1E-17 2.3E-22  114.3  10.1   95   39-134    48-142 (305)
172 cd05039 PTKc_Csk_like Catalyti  99.8 1.3E-17 2.8E-22  111.1  10.3   96   39-134    47-143 (256)
173 cd05049 PTKc_Trk Catalytic dom  99.8 2.1E-17 4.5E-22  111.3  11.3   95   40-134    56-163 (280)
174 cd06654 STKc_PAK1 Catalytic do  99.8 8.3E-18 1.8E-22  114.5   9.5   93   40-134    65-157 (296)
175 cd05056 PTKc_FAK Catalytic dom  99.8 1.5E-17 3.3E-22  111.6  10.6   92   42-134    57-148 (270)
176 cd05632 STKc_GRK5 Catalytic do  99.8   1E-17 2.2E-22  113.4   9.8   95   40-134    48-143 (285)
177 cd07873 STKc_PCTAIRE1 Catalyti  99.8 8.1E-18 1.8E-22  114.7   9.4   93   41-134    53-145 (301)
178 cd06659 STKc_PAK6 Catalytic do  99.8 1.4E-17   3E-22  113.5  10.3   97   10-134    62-158 (297)
179 cd08224 STKc_Nek6_Nek7 Catalyt  99.7 1.6E-17 3.5E-22  111.0  10.4   95   40-134    50-147 (267)
180 cd05045 PTKc_RET Catalytic dom  99.7 1.1E-17 2.4E-22  113.4   9.7   96   39-134    50-168 (290)
181 cd05586 STKc_Sck1_like Catalyt  99.7   1E-17 2.2E-22  115.6   9.6   84   50-134    54-137 (330)
182 KOG0032|consensus               99.7   1E-17 2.2E-22  117.4   9.6   90   38-129    81-171 (382)
183 cd06646 STKc_MAP4K5 Catalytic   99.7 1.9E-17   4E-22  110.9  10.5   94   40-134    54-147 (267)
184 cd05058 PTKc_Met_Ron Catalytic  99.7 2.2E-17 4.7E-22  110.2  10.7   94   41-134    45-139 (262)
185 cd05098 PTKc_FGFR1 Catalytic d  99.7 1.6E-17 3.5E-22  113.5  10.1   95   40-134    71-181 (307)
186 PHA03211 serine/threonine kina  99.7 1.7E-17 3.8E-22  119.1  10.7   95   39-134   207-301 (461)
187 PRK13184 pknD serine/threonine  99.7   2E-17 4.3E-22  125.4  11.3   94   41-134    51-154 (932)
188 cd05099 PTKc_FGFR4 Catalytic d  99.7 1.9E-17 4.1E-22  113.5  10.4   96   39-134    64-175 (314)
189 KOG0694|consensus               99.7 2.3E-18 5.1E-23  124.4   5.9   83   50-134   427-509 (694)
190 cd06642 STKc_STK25-YSK1 Cataly  99.7 2.2E-17 4.8E-22  111.2  10.4   91   42-134    52-142 (277)
191 KOG0607|consensus               99.7 1.5E-17 3.2E-22  112.1   9.2   90   40-130   123-213 (463)
192 cd05038 PTKc_Jak_rpt2 Catalyti  99.7 2.3E-17 5.1E-22  111.1  10.4   95   40-134    54-150 (284)
193 cd05574 STKc_phototropin_like   99.7 2.9E-17 6.3E-22  112.6  11.0   96   39-134    48-144 (316)
194 cd05111 PTK_HER3 Pseudokinase   99.7 2.4E-17 5.1E-22  111.3  10.4   95   39-134    56-150 (279)
195 cd05579 STKc_MAST_like Catalyt  99.7 2.1E-17 4.5E-22  110.1   9.9   92   42-134    43-134 (265)
196 cd06631 STKc_YSK4 Catalytic do  99.7 2.3E-17   5E-22  110.4  10.1   96   38-134    48-143 (265)
197 cd05577 STKc_GRK Catalytic dom  99.7 1.7E-17 3.6E-22  111.9   9.5   94   41-134    42-136 (277)
198 KOG4279|consensus               99.7 6.3E-18 1.4E-22  123.4   7.8   95   40-134   620-717 (1226)
199 cd05615 STKc_cPKC_alpha Cataly  99.7 2.6E-17 5.6E-22  113.4  10.5   92   42-134    50-142 (323)
200 cd06628 STKc_MAPKKK_Byr2_like   99.7 3.3E-17 7.1E-22  109.7  10.7   96   38-134    52-147 (267)
201 cd06632 STKc_MEKK1_plant Catal  99.7 4.2E-17 9.2E-22  108.4  11.2   93   41-134    51-143 (258)
202 cd05630 STKc_GRK6 Catalytic do  99.7 1.7E-17 3.6E-22  112.5   9.3   95   40-134    48-143 (285)
203 cd05100 PTKc_FGFR3 Catalytic d  99.7 2.6E-17 5.6E-22  113.8  10.4   96   39-134    64-175 (334)
204 KOG0196|consensus               99.7 1.6E-18 3.4E-23  127.2   4.5  102    7-134   671-772 (996)
205 cd06656 STKc_PAK3 Catalytic do  99.7 1.9E-17 4.1E-22  112.8   9.6   93   40-134    64-156 (297)
206 KOG1035|consensus               99.7 5.4E-18 1.2E-22  128.8   7.5   69   65-134   669-738 (1351)
207 cd05072 PTKc_Lyn Catalytic dom  99.7 2.2E-17 4.8E-22  110.2   9.7   95   40-134    49-144 (261)
208 PHA03209 serine/threonine kina  99.7 2.4E-17 5.1E-22  115.1  10.1   94   40-134   105-198 (357)
209 cd05041 PTKc_Fes_like Catalyti  99.7 2.1E-17 4.5E-22  109.7   9.4   96   39-134    39-134 (251)
210 cd05112 PTKc_Itk Catalytic dom  99.7 3.1E-17 6.7E-22  109.2  10.3   95   40-134    47-141 (256)
211 KOG0662|consensus               99.7 3.8E-18 8.3E-23  106.9   5.5   93   41-134    50-142 (292)
212 cd07841 STKc_CDK7 Catalytic do  99.7 2.9E-17 6.4E-22  111.6  10.3   93   41-134    51-143 (298)
213 cd06657 STKc_PAK4 Catalytic do  99.7 4.4E-17 9.5E-22  110.8  11.2   89   44-134    69-157 (292)
214 KOG1026|consensus               99.7 1.4E-17   3E-22  122.7   9.2  100    9-134   532-644 (774)
215 cd06622 PKc_MAPKK_PBS2_like Ca  99.7   3E-17 6.6E-22  110.9  10.3   98   11-134    44-144 (286)
216 KOG1094|consensus               99.7 2.8E-18   6E-23  122.8   5.2  100    9-134   578-678 (807)
217 cd06655 STKc_PAK2 Catalytic do  99.7 2.6E-17 5.7E-22  112.1   9.8   92   41-134    65-156 (296)
218 cd05050 PTKc_Musk Catalytic do  99.7 3.1E-17 6.6E-22  111.1  10.1   94   41-134    57-171 (288)
219 cd05032 PTKc_InsR_like Catalyt  99.7 2.7E-17 5.9E-22  110.6   9.7   95   40-134    57-160 (277)
220 cd05035 PTKc_Axl_like Catalyti  99.7 3.8E-17 8.1E-22  109.6  10.4   94   41-134    50-154 (273)
221 cd05034 PTKc_Src_like Catalyti  99.7 2.8E-17 6.1E-22  109.7   9.7   95   40-134    49-144 (261)
222 cd07844 STKc_PCTAIRE_like Cata  99.7   3E-17 6.6E-22  111.2   9.9   94   40-134    51-144 (291)
223 cd06605 PKc_MAPKK Catalytic do  99.7 4.2E-17 9.2E-22  108.9  10.5   92   43-134    50-142 (265)
224 cd05082 PTKc_Csk Catalytic dom  99.7 3.8E-17 8.2E-22  108.9  10.1   95   40-134    47-143 (256)
225 cd06640 STKc_MST4 Catalytic do  99.7 4.5E-17 9.7E-22  109.8  10.6   93   40-134    50-142 (277)
226 cd06630 STKc_MEKK1 Catalytic d  99.7 3.2E-17   7E-22  109.7   9.8   90   40-130    51-140 (268)
227 cd05061 PTKc_InsR Catalytic do  99.7 4.6E-17   1E-21  110.3  10.6   95   40-134    57-160 (288)
228 cd06612 STKc_MST1_2 Catalytic   99.7 7.7E-17 1.7E-21  107.1  11.5   97   38-134    44-140 (256)
229 cd06648 STKc_PAK_II Catalytic   99.7 5.6E-17 1.2E-21  109.9  11.0   92   41-134    65-156 (285)
230 cd05116 PTKc_Syk Catalytic dom  99.7 4.1E-17 8.8E-22  108.8  10.2   94   39-134    43-136 (257)
231 KOG4717|consensus               99.7 2.4E-17 5.2E-22  117.1   9.3   99   36-134    61-160 (864)
232 smart00219 TyrKc Tyrosine kina  99.7 5.3E-17 1.2E-21  107.9  10.6   95   40-134    49-144 (258)
233 cd07853 STKc_NLK Catalytic dom  99.7 2.5E-17 5.4E-22  115.4   9.4   93   40-134    47-144 (372)
234 KOG0577|consensus               99.7 2.4E-18 5.3E-23  123.5   4.3   92   42-134    76-167 (948)
235 KOG0612|consensus               99.7 2.1E-17 4.5E-22  125.0   9.4   93   41-134   124-216 (1317)
236 cd05610 STKc_MASTL Catalytic d  99.7 2.8E-17 6.2E-22  122.7  10.2   95   39-134    51-145 (669)
237 cd07861 STKc_CDK1_euk Catalyti  99.7 2.5E-17 5.4E-22  111.2   9.0   94   40-134    47-142 (285)
238 cd06619 PKc_MKK5 Catalytic dom  99.7 3.4E-17 7.3E-22  110.5   9.5   89   41-134    48-136 (279)
239 cd05075 PTKc_Axl Catalytic dom  99.7 4.7E-17   1E-21  109.2   9.9   92   43-134    51-153 (272)
240 cd05572 STKc_cGK_PKG Catalytic  99.7 3.6E-17 7.9E-22  109.2   9.3   95   39-134    40-134 (262)
241 cd05073 PTKc_Hck Catalytic dom  99.7 6.2E-17 1.3E-21  108.1  10.3   94   40-134    49-143 (260)
242 KOG4645|consensus               99.7 1.9E-18 4.1E-23  131.9   3.3   97   36-133  1278-1374(1509)
243 cd07832 STKc_CCRK Catalytic do  99.7 4.4E-17 9.5E-22  110.0   9.7   94   40-134    47-140 (286)
244 cd05616 STKc_cPKC_beta Catalyt  99.7 4.1E-17 8.9E-22  112.4   9.6   92   42-134    50-142 (323)
245 cd05044 PTKc_c-ros Catalytic d  99.7 6.2E-17 1.3E-21  108.4   9.9   92   39-130    46-143 (269)
246 cd08218 STKc_Nek1 Catalytic do  99.7 5.6E-17 1.2E-21  107.9   9.6   96   39-134    46-142 (256)
247 KOG2345|consensus               99.7 1.4E-16   3E-21  103.8  10.9  111    2-133    54-169 (302)
248 cd08223 STKc_Nek4 Catalytic do  99.7 9.4E-17   2E-21  106.8  10.3   96   39-134    46-143 (257)
249 cd06652 STKc_MEKK2 Catalytic d  99.7 6.2E-17 1.3E-21  108.3   9.4   94   40-134    52-147 (265)
250 cd06629 STKc_MAPKKK_Bck1_like   99.7 1.3E-16 2.9E-21  107.0  11.1   96   38-134    54-149 (272)
251 cd05109 PTKc_HER2 Catalytic do  99.7 8.9E-17 1.9E-21  108.4  10.2   94   40-134    57-150 (279)
252 cd06626 STKc_MEKK4 Catalytic d  99.7 1.3E-16 2.8E-21  106.5  10.9   94   40-134    47-140 (264)
253 cd05083 PTKc_Chk Catalytic dom  99.7 9.5E-17 2.1E-21  106.8  10.2   95   39-134    46-141 (254)
254 cd05613 STKc_MSK1_N N-terminal  99.7   8E-17 1.7E-21  109.1  10.0   95   39-134    51-146 (290)
255 cd06607 STKc_TAO Catalytic dom  99.7 6.8E-17 1.5E-21  110.5   9.7   95   39-134    62-156 (307)
256 cd05069 PTKc_Yes Catalytic dom  99.7 7.8E-17 1.7E-21  107.7   9.7   94   40-134    49-143 (260)
257 cd07847 STKc_CDKL1_4 Catalytic  99.7 1.2E-16 2.6E-21  107.8  10.7   94   40-134    48-141 (286)
258 cd05060 PTKc_Syk_like Catalyti  99.7 9.4E-17   2E-21  107.0  10.0   93   40-134    44-136 (257)
259 cd07839 STKc_CDK5 Catalytic do  99.7 4.9E-17 1.1E-21  109.7   8.8   93   41-134    48-140 (284)
260 cd06653 STKc_MEKK3_like_1 Cata  99.7 9.8E-17 2.1E-21  107.4  10.1   93   41-134    53-147 (264)
261 cd05071 PTKc_Src Catalytic dom  99.7 1.1E-16 2.3E-21  107.2  10.1   94   40-134    49-143 (262)
262 KOG1095|consensus               99.7 4.3E-17 9.3E-22  123.6   8.9  105    4-134   733-843 (1025)
263 cd08220 STKc_Nek8 Catalytic do  99.7 1.7E-16 3.7E-21  105.5  10.8   89   42-130    49-138 (256)
264 cd05110 PTKc_HER4 Catalytic do  99.7 8.6E-17 1.9E-21  109.8   9.6   94   40-134    57-150 (303)
265 cd05036 PTKc_ALK_LTK Catalytic  99.7 1.1E-16 2.3E-21  107.9  10.0   89   42-130    59-153 (277)
266 cd06609 STKc_MST3_like Catalyt  99.7 9.8E-17 2.1E-21  107.9   9.7   93   40-134    47-139 (274)
267 cd05103 PTKc_VEGFR2 Catalytic   99.7 1.8E-16 3.9E-21  110.0  11.3   45   90-134   176-220 (343)
268 cd05091 PTKc_Ror2 Catalytic do  99.7 1.2E-16 2.6E-21  107.9  10.1   96   39-134    55-165 (283)
269 cd06647 STKc_PAK_I Catalytic d  99.7 7.1E-17 1.5E-21  109.8   9.0   92   41-134    65-156 (293)
270 PF00069 Pkinase:  Protein kina  99.7 5.5E-17 1.2E-21  108.0   8.3   92   42-134    48-139 (260)
271 cd07878 STKc_p38beta_MAPK11 Ca  99.7 1.5E-16 3.2E-21  110.4  10.7  102   10-134    58-159 (343)
272 cd06651 STKc_MEKK3 Catalytic d  99.7 1.1E-16 2.5E-21  107.2   9.8   94   40-134    52-147 (266)
273 cd08215 STKc_Nek Catalytic dom  99.7 2.3E-16 5.1E-21  104.6  11.2   94   41-134    48-144 (258)
274 PHA03210 serine/threonine kina  99.7 6.2E-17 1.3E-21  117.5   9.1   96   38-134   209-308 (501)
275 cd06641 STKc_MST3 Catalytic do  99.7 8.7E-17 1.9E-21  108.4   9.2   94   39-134    49-142 (277)
276 cd06635 STKc_TAO1 Catalytic do  99.7 1.9E-16 4.1E-21  108.8  10.9   94   40-134    73-166 (317)
277 cd05054 PTKc_VEGFR Catalytic d  99.7 2.8E-16 6.1E-21  109.0  11.7   95   40-134    58-214 (337)
278 KOG0666|consensus               99.7 5.3E-17 1.2E-21  109.0   7.7   95   39-134    74-177 (438)
279 cd06614 STKc_PAK Catalytic dom  99.7 3.2E-16   7E-21  106.0  11.7   97   38-134    61-157 (286)
280 cd07870 STKc_PFTAIRE2 Catalyti  99.7 1.8E-16 3.9E-21  107.5  10.5   93   41-134    52-144 (291)
281 cd07846 STKc_CDKL2_3 Catalytic  99.7 1.1E-16 2.4E-21  108.0   9.4   92   42-134    50-141 (286)
282 cd05107 PTKc_PDGFR_beta Cataly  99.7 1.3E-16 2.8E-21  113.0   9.8   96   39-134    87-280 (401)
283 cd06620 PKc_MAPKK_Byr1_like Ca  99.7 1.7E-16 3.7E-21  107.3  10.0   94   40-134    51-145 (284)
284 cd07843 STKc_CDC2L1 Catalytic   99.7 1.4E-16 3.1E-21  108.1   9.5   95   39-134    51-147 (293)
285 cd06634 STKc_TAO2 Catalytic do  99.7 2.7E-16   6E-21  107.6  10.9   93   41-134    64-156 (308)
286 cd05123 STKc_AGC Catalytic dom  99.7 3.9E-16 8.5E-21  103.4  11.4   92   42-134    43-134 (250)
287 cd05576 STKc_RPK118_like Catal  99.7 6.9E-17 1.5E-21  106.8   7.7   88   46-134    39-126 (237)
288 cd06627 STKc_Cdc7_like Catalyt  99.7 2.6E-16 5.6E-21  104.3  10.4   96   38-134    45-140 (254)
289 cd06633 STKc_TAO3 Catalytic do  99.7 3.9E-16 8.5E-21  107.1  11.5   94   40-134    69-162 (313)
290 cd07860 STKc_CDK2_3 Catalytic   99.7 6.5E-17 1.4E-21  109.2   7.5   93   41-134    48-141 (284)
291 cd08225 STKc_Nek5 Catalytic do  99.7 2.8E-16 6.1E-21  104.5  10.2   90   41-130    48-138 (257)
292 KOG0614|consensus               99.7 9.6E-18 2.1E-22  118.6   3.2  113   19-134   449-561 (732)
293 cd05633 STKc_GRK3 Catalytic do  99.7 3.9E-16 8.6E-21  105.5  11.0   90   44-134    49-138 (279)
294 cd06917 STKc_NAK1_like Catalyt  99.7 2.2E-16 4.9E-21  106.2   9.7   92   41-134    48-142 (277)
295 cd05067 PTKc_Lck_Blk Catalytic  99.7 1.7E-16 3.7E-21  106.0   9.0   93   41-134    50-143 (260)
296 cd05070 PTKc_Fyn_Yrk Catalytic  99.7 4.1E-16 8.8E-21  104.1  10.8   94   40-134    49-143 (260)
297 cd07876 STKc_JNK2 Catalytic do  99.7 1.2E-16 2.6E-21  111.5   8.5   90   41-134    69-164 (359)
298 cd06608 STKc_myosinIII_like Ca  99.7 3.8E-16 8.1E-21  104.7  10.5   95   40-134    50-154 (275)
299 cd07874 STKc_JNK3 Catalytic do  99.7 1.7E-16 3.7E-21  110.5   9.1   88   43-134    67-160 (355)
300 cd05583 STKc_MSK_N N-terminal   99.7 3.3E-16 7.2E-21  106.0  10.2   94   40-134    52-146 (288)
301 cd06621 PKc_MAPKK_Pek1_like Ca  99.7 3.9E-16 8.5E-21  105.7  10.6   94   41-134    48-146 (287)
302 cd08217 STKc_Nek2 Catalytic do  99.7 2.7E-16 5.9E-21  104.7   9.6   93   42-134    49-151 (265)
303 cd07833 STKc_CDKL Catalytic do  99.7 1.8E-16 3.8E-21  107.1   8.7   95   39-134    47-141 (288)
304 cd07836 STKc_Pho85 Catalytic d  99.7 3.7E-16   8E-21  105.4  10.0   94   40-134    46-141 (284)
305 cd07868 STKc_CDK8 Catalytic do  99.7 1.7E-16 3.7E-21  108.8   8.5   93   40-133    46-152 (317)
306 KOG4278|consensus               99.7 1.2E-16 2.5E-21  115.8   7.8  103    6-134   303-406 (1157)
307 cd07862 STKc_CDK6 Catalytic do  99.7 1.8E-16   4E-21  107.3   8.4   85   49-134    61-151 (290)
308 PRK10345 hypothetical protein;  99.7 2.2E-16 4.7E-21  102.7   8.4   95    9-128    39-140 (210)
309 cd05606 STKc_beta_ARK Catalyti  99.7 5.9E-16 1.3E-20  104.5  10.7   92   42-134    47-138 (278)
310 cd06623 PKc_MAPKK_plant_like C  99.7 3.4E-16 7.4E-21  104.4   9.5   95   39-134    46-141 (264)
311 cd06637 STKc_TNIK Catalytic do  99.7 4.1E-16 8.9E-21  104.6   9.9   94   41-134    51-152 (272)
312 cd05581 STKc_PDK1 Catalytic do  99.7 2.9E-16 6.3E-21  105.5   9.1   83   51-134    61-143 (280)
313 cd08530 STKc_CNK2-like Catalyt  99.7 6.9E-16 1.5E-20  102.5  10.6   93   42-134    49-144 (256)
314 cd05043 PTK_Ryk Pseudokinase d  99.7 3.8E-16 8.3E-21  105.3   9.5   95   40-134    56-158 (280)
315 cd06606 STKc_MAPKKK Catalytic   99.7 4.5E-16 9.7E-21  103.2   9.5   96   38-134    45-142 (260)
316 cd06610 STKc_OSR1_SPAK Catalyt  99.7 9.7E-16 2.1E-20  102.3  11.1   97   38-134    45-143 (267)
317 PLN00009 cyclin-dependent kina  99.7 5.2E-16 1.1E-20  105.4   9.8   93   40-133    49-143 (294)
318 KOG0669|consensus               99.7 1.7E-16 3.7E-21  104.1   6.7  106   10-134    60-165 (376)
319 cd05122 PKc_STE Catalytic doma  99.7 1.1E-15 2.3E-20  101.0  10.6   97   38-134    43-139 (253)
320 KOG1152|consensus               99.7 1.8E-16   4E-21  113.4   6.8   95   39-134   613-711 (772)
321 cd07875 STKc_JNK1 Catalytic do  99.7 4.2E-16   9E-21  109.0   8.5   89   42-134    73-167 (364)
322 cd06638 STKc_myosinIIIA Cataly  99.7 9.1E-16   2E-20  103.7   9.9   95   40-134    62-165 (286)
323 cd05118 STKc_CMGC Catalytic do  99.7 4.8E-16   1E-20  104.7   8.5   93   41-134    47-139 (283)
324 PTZ00036 glycogen synthase kin  99.7 8.6E-16 1.9E-20  110.0  10.2   93   41-134   108-212 (440)
325 cd07865 STKc_CDK9 Catalytic do  99.7 5.5E-16 1.2E-20  105.7   8.8   92   42-134    61-160 (310)
326 cd05074 PTKc_Tyro3 Catalytic d  99.7 1.1E-15 2.4E-20  102.5  10.2   94   41-134    50-154 (273)
327 cd07840 STKc_CDK9_like Catalyt  99.7 5.2E-16 1.1E-20  104.6   8.5   92   42-134    48-141 (287)
328 cd05611 STKc_Rim15_like Cataly  99.7 1.2E-15 2.5E-20  101.9   9.9   88   46-134    51-138 (260)
329 PTZ00283 serine/threonine prot  99.7 5.2E-16 1.1E-20  112.5   8.7   93   42-134    81-184 (496)
330 cd07867 STKc_CDC2L6 Catalytic   99.7 4.7E-16   1E-20  106.5   8.0   93   40-133    46-152 (317)
331 cd07842 STKc_CDK8_like Catalyt  99.7 5.9E-16 1.3E-20  105.9   8.4   94   40-134    50-153 (316)
332 KOG4257|consensus               99.7 7.8E-16 1.7E-20  111.4   9.2  101    7-134   432-532 (974)
333 cd07845 STKc_CDK10 Catalytic d  99.7 1.4E-15 3.1E-20  104.0  10.1   93   41-134    55-149 (309)
334 PTZ00266 NIMA-related protein   99.7   1E-15 2.2E-20  116.8  10.2   89   40-128    60-160 (1021)
335 cd08528 STKc_Nek10 Catalytic d  99.7 9.7E-16 2.1E-20  102.7   9.0   96   39-134    55-155 (269)
336 cd07829 STKc_CDK_like Catalyti  99.7 1.4E-15 3.1E-20  102.4   9.8   97   11-134    43-139 (282)
337 cd07855 STKc_ERK5 Catalytic do  99.7 6.1E-16 1.3E-20  107.0   8.1   90   43-134    55-148 (334)
338 PHA03390 pk1 serine/threonine-  99.7 1.2E-15 2.7E-20  102.5   9.3   83   50-133    67-150 (267)
339 cd07835 STKc_CDK1_like Catalyt  99.6 1.1E-15 2.4E-20  103.1   8.8   92   42-134    48-140 (283)
340 cd08222 STKc_Nek11 Catalytic d  99.6 2.3E-15   5E-20  100.5   9.9   83   46-128    56-141 (260)
341 cd06636 STKc_MAP4K4_6 Catalyti  99.6 1.4E-15   3E-20  102.7   8.8   94   41-134    61-162 (282)
342 cd07864 STKc_CDK12 Catalytic d  99.6 1.5E-15 3.4E-20  103.3   9.0   92   42-134    56-157 (302)
343 cd07854 STKc_MAPK4_6 Catalytic  99.6 2.2E-15 4.9E-20  104.5   9.9  112    7-133    43-155 (342)
344 cd06639 STKc_myosinIIIB Cataly  99.6 3.1E-15 6.7E-20  101.4  10.4   95   40-134    66-169 (291)
345 cd07837 STKc_CdkB_plant Cataly  99.6 2.4E-15 5.2E-20  102.0   9.8   93   41-134    49-152 (295)
346 cd07880 STKc_p38gamma_MAPK12 C  99.6 1.6E-15 3.4E-20  105.4   9.0   91   41-134    63-159 (343)
347 cd07852 STKc_MAPK15 Catalytic   99.6 1.9E-15 4.1E-20  104.6   9.4   91   41-134    55-148 (337)
348 PTZ00024 cyclin-dependent prot  99.6 2.4E-15 5.1E-20  104.0   9.6   93   40-134    68-160 (335)
349 cd07849 STKc_ERK1_2_like Catal  99.6 1.2E-15 2.6E-20  105.6   7.8   90   42-134    53-147 (336)
350 cd07850 STKc_JNK Catalytic dom  99.6 2.1E-15 4.5E-20  105.1   9.0   90   41-134    64-159 (353)
351 cd07863 STKc_CDK4 Catalytic do  99.6 2.3E-15 4.9E-20  101.8   8.9   85   49-134    59-149 (288)
352 KOG0690|consensus               99.6 1.9E-16 4.2E-21  107.1   3.6   94   40-134   216-309 (516)
353 cd07834 STKc_MAPK Catalytic do  99.6 1.4E-15 3.1E-20  104.8   8.0  103    9-134    42-144 (330)
354 cd07831 STKc_MOK Catalytic dom  99.6 3.9E-15 8.4E-20  100.3   9.9   92   41-134    46-140 (282)
355 KOG0667|consensus               99.6 9.5E-16 2.1E-20  110.4   7.1  102   30-132   220-328 (586)
356 KOG0986|consensus               99.6 3.4E-16 7.3E-21  109.4   4.6   96   39-134   232-328 (591)
357 cd07830 STKc_MAK_like Catalyti  99.6 3.4E-15 7.3E-20  100.7   9.2   92   42-134    47-140 (283)
358 cd07856 STKc_Sty1_Hog1 Catalyt  99.6 3.1E-15 6.7E-20  103.4   9.1   92   40-134    57-149 (328)
359 KOG0604|consensus               99.6 1.4E-15 3.1E-20  101.7   7.0   92   38-129   100-197 (400)
360 PRK09188 serine/threonine prot  99.6 2.4E-15 5.2E-20  104.8   8.0   83   40-134    69-153 (365)
361 PLN00113 leucine-rich repeat r  99.6 2.5E-15 5.5E-20  116.2   8.8   90   40-133   731-823 (968)
362 KOG4236|consensus               99.6 3.5E-15 7.5E-20  106.5   8.6   91   39-129   610-700 (888)
363 KOG0201|consensus               99.6 1.9E-16 4.2E-21  109.8   2.2  101    7-134    52-152 (467)
364 cd06617 PKc_MKK3_6 Catalytic d  99.6 5.1E-15 1.1E-19   99.8   8.7   88   46-134    54-145 (283)
365 cd07851 STKc_p38 Catalytic dom  99.6 5.1E-15 1.1E-19  102.8   8.9  103    9-134    57-159 (343)
366 cd07877 STKc_p38alpha_MAPK14 C  99.6 7.3E-15 1.6E-19  102.1   9.6   91   41-134    65-161 (345)
367 cd07858 STKc_TEY_MAPK_plant Ca  99.6 6.4E-15 1.4E-19  102.1   9.1   68   65-134    82-149 (337)
368 cd06618 PKc_MKK7 Catalytic dom  99.6 2.2E-14 4.8E-19   97.6  10.9   83   51-134    73-156 (296)
369 cd07857 STKc_MPK1 Catalytic do  99.6 1.4E-14 3.1E-19  100.1   9.9   82   51-134    61-146 (332)
370 cd07866 STKc_BUR1 Catalytic do  99.6 9.4E-15   2E-19   99.7   8.7  104   12-134    53-156 (311)
371 smart00220 S_TKc Serine/Threon  99.6 3.5E-14 7.6E-19   93.1  10.3   98   10-134    31-128 (244)
372 cd05147 RIO1_euk RIO kinase fa  99.6 1.8E-14 3.9E-19   92.6   8.2   90   40-133    67-157 (190)
373 PTZ00284 protein kinase; Provi  99.6 3.1E-14 6.8E-19  102.6  10.1   79   50-130   189-269 (467)
374 KOG0664|consensus               99.6 1.3E-15 2.9E-20  101.1   2.6  102   10-134    96-197 (449)
375 cd07838 STKc_CDK4_6_like Catal  99.6 4.4E-14 9.5E-19   95.3  10.0   85   49-134    58-148 (287)
376 cd06616 PKc_MKK4 Catalytic dom  99.5 5.2E-14 1.1E-18   95.3   9.5   94   40-134    50-149 (288)
377 KOG0587|consensus               99.5 4.9E-14 1.1E-18  104.8  10.0   93   42-134    65-164 (953)
378 PLN03224 probable serine/threo  99.5 8.7E-14 1.9E-18  100.8  11.0  115    8-134   200-350 (507)
379 KOG0665|consensus               99.5 4.3E-15 9.4E-20   99.8   4.0   95   36-134    59-159 (369)
380 KOG0984|consensus               99.5 1.6E-14 3.4E-19   92.4   6.1   94   40-134    92-190 (282)
381 cd05145 RIO1_like RIO kinase f  99.5 6.1E-14 1.3E-18   90.1   8.9   90   40-133    67-157 (190)
382 cd00180 PKc Catalytic domain o  99.5 1.9E-13 4.1E-18   87.6  11.1   95   39-133    38-133 (215)
383 KOG1027|consensus               99.5 5.6E-14 1.2E-18  104.0   9.3   98   30-128   540-641 (903)
384 KOG0668|consensus               99.5 7.7E-15 1.7E-19   95.2   4.1   87   39-129    79-168 (338)
385 KOG0199|consensus               99.5 8.2E-15 1.8E-19  107.3   4.2   99    9-134   154-253 (1039)
386 KOG1025|consensus               99.5 1.2E-14 2.7E-19  107.8   5.1  102    6-134   738-839 (1177)
387 cd07879 STKc_p38delta_MAPK13 C  99.5 5.2E-14 1.1E-18   97.7   8.0   89   42-134    64-158 (342)
388 smart00221 STYKc Protein kinas  99.5 2.7E-13 5.8E-18   88.2  10.4   93   42-134    47-139 (225)
389 KOG0603|consensus               99.5 4.5E-14 9.7E-19  101.8   7.1   93   40-134   363-457 (612)
390 KOG0696|consensus               99.5 1.3E-14 2.8E-19  101.1   4.0   84   50-134   408-491 (683)
391 KOG0695|consensus               99.5 3.1E-14 6.8E-19   97.0   5.4   85   49-134   308-392 (593)
392 KOG1151|consensus               99.5 1.8E-13 3.8E-18   96.3   8.9   91   38-129   513-606 (775)
393 KOG2052|consensus               99.5 9.9E-14 2.1E-18   96.9   7.6  105    6-134   243-357 (513)
394 KOG0200|consensus               99.5 3.1E-13 6.8E-18  100.2  10.6  101    8-134   343-459 (609)
395 KOG0596|consensus               99.5 4.8E-13   1E-17   95.7  10.4   94   38-133   405-499 (677)
396 PHA02882 putative serine/threo  99.5 9.1E-13   2E-17   89.8  11.5   90   43-134    74-167 (294)
397 KOG0576|consensus               99.5 8.8E-15 1.9E-19  106.3   1.5   94   40-134    60-153 (829)
398 KOG1345|consensus               99.5 1.5E-13 3.2E-18   91.2   6.9   91   10-127    64-155 (378)
399 PRK09605 bifunctional UGMP fam  99.5 3.3E-13 7.2E-18   98.9   8.2   86   38-133   382-467 (535)
400 PRK12274 serine/threonine prot  99.5 7.3E-13 1.6E-17   85.7   8.8   84   39-134    48-133 (218)
401 PRK10359 lipopolysaccharide co  99.4 2.4E-13 5.1E-18   89.3   6.1   84   40-133    83-174 (232)
402 KOG0983|consensus               99.4 9.6E-14 2.1E-18   92.2   3.5   83   51-134   150-233 (391)
403 PRK14879 serine/threonine prot  99.4 1.7E-12 3.6E-17   84.4   9.1   88   39-132    46-133 (211)
404 PLN00181 protein SPA1-RELATED;  99.4 1.8E-13 3.8E-18  104.3   4.3   67   65-132    53-119 (793)
405 TIGR03724 arch_bud32 Kae1-asso  99.4   3E-12 6.4E-17   82.6   8.5   86   39-133    44-129 (199)
406 KOG3653|consensus               99.4 6.5E-12 1.4E-16   88.5   9.9  104    7-134   243-357 (534)
407 KOG1167|consensus               99.4 2.9E-12 6.2E-17   88.8   7.5   84   41-128    83-167 (418)
408 PRK01723 3-deoxy-D-manno-octul  99.4 6.5E-12 1.4E-16   83.5   8.9   90   38-133    86-182 (239)
409 KOG0671|consensus               99.4 5.5E-12 1.2E-16   86.7   8.2  104   28-132   121-231 (415)
410 KOG1290|consensus               99.3 8.4E-12 1.8E-16   88.3   8.3   77   52-129   142-224 (590)
411 smart00090 RIO RIO-like kinase  99.3   1E-11 2.2E-16   82.4   7.0   90   40-133    98-188 (237)
412 KOG1006|consensus               99.3 6.9E-12 1.5E-16   83.1   4.9   83   51-134   122-209 (361)
413 KOG4158|consensus               99.3 7.1E-12 1.5E-16   87.3   5.2   99   24-127   274-375 (598)
414 KOG1164|consensus               99.2 4.3E-11 9.3E-16   82.8   8.3   78   52-130    80-159 (322)
415 PLN03225 Serine/threonine-prot  99.2 4.2E-11 9.2E-16   88.3   8.5   73   62-134   205-297 (566)
416 COG0515 SPS1 Serine/threonine   99.2 1.9E-10 4.1E-15   77.8   9.8   89   42-130    47-138 (384)
417 KOG1163|consensus               99.2 1.7E-10 3.6E-15   75.8   7.8   77   52-129    71-147 (341)
418 cd05144 RIO2_C RIO kinase fami  99.2 1.1E-10 2.5E-15   75.3   6.6   85   39-134    80-166 (198)
419 KOG0670|consensus               99.1   2E-10 4.3E-15   82.4   7.5   76   54-130   496-573 (752)
420 KOG0590|consensus               99.1 3.6E-11 7.8E-16   89.0   3.2   93   40-134   369-461 (601)
421 KOG1165|consensus               99.1 1.1E-09 2.4E-14   74.8   7.7   80   50-130    82-161 (449)
422 cd05120 APH_ChoK_like Aminogly  99.0 9.7E-10 2.1E-14   67.2   6.1   73   53-133    54-129 (155)
423 TIGR01982 UbiB 2-polyprenylphe  98.9 3.6E-08 7.9E-13   70.9  11.3  124    7-133   151-297 (437)
424 KOG3087|consensus               98.9 4.6E-08   1E-12   62.2   9.3  109   21-131    41-151 (229)
425 cd05119 RIO RIO kinase family,  98.9 1.6E-08 3.5E-13   64.5   7.2  106   18-133    46-154 (187)
426 KOG1023|consensus               98.8 1.3E-08 2.7E-13   73.4   6.8   88   47-134     2-90  (484)
427 KOG1024|consensus               98.8 4.7E-08   1E-12   68.4   8.3   93   42-134   337-437 (563)
428 PRK04750 ubiB putative ubiquin  98.8 2.4E-08 5.2E-13   73.2   6.7   59   65-130   234-297 (537)
429 cd05146 RIO3_euk RIO kinase fa  98.7 8.3E-08 1.8E-12   61.9   7.9   86   38-129    72-161 (197)
430 COG3642 Mn2+-dependent serine/  98.7 2.3E-07 4.9E-12   59.0   9.2   98   23-130    32-129 (204)
431 KOG1166|consensus               98.7   2E-08 4.3E-13   77.3   5.0   71   57-128   759-829 (974)
432 PF06293 Kdo:  Lipopolysacchari  98.7 5.2E-07 1.1E-11   58.8   9.8   92   38-130    57-155 (206)
433 KOG1266|consensus               98.7 6.4E-08 1.4E-12   66.5   5.6   92   43-134   118-219 (458)
434 PRK15123 lipopolysaccharide co  98.6 7.6E-07 1.6E-11   60.3  10.2   90   39-128    75-173 (268)
435 KOG3741|consensus               98.6   2E-07 4.4E-12   67.4   7.1   92   43-134   324-434 (655)
436 KOG1243|consensus               98.6 2.9E-07 6.3E-12   68.0   7.9   89   40-134    57-146 (690)
437 KOG0603|consensus               98.6 3.8E-08 8.3E-13   71.8   2.9   95   38-133    42-137 (612)
438 smart00750 KIND kinase non-cat  98.6 3.1E-07 6.8E-12   57.9   6.8   52   77-134     1-52  (176)
439 cd05151 ChoK Choline Kinase (C  98.5 3.5E-07 7.6E-12   57.3   5.8   57   66-132    65-126 (170)
440 KOG0195|consensus               98.4 1.8E-07   4E-12   62.9   3.1   88   46-133   241-331 (448)
441 KOG0590|consensus               98.3 1.1E-07 2.4E-12   70.8  -0.9   96   38-133    66-165 (601)
442 KOG1240|consensus               98.2 3.9E-07 8.4E-12   70.8  -0.0   81   48-130    77-157 (1431)
443 PF01163 RIO1:  RIO1 family;  I  98.1 1.3E-05 2.8E-10   51.5   6.2   87   37-130    53-144 (188)
444 PF06176 WaaY:  Lipopolysacchar  97.8 6.6E-05 1.4E-09   49.4   5.6   57   66-131   117-173 (229)
445 PF14531 Kinase-like:  Kinase-l  97.8 2.4E-05 5.1E-10   53.4   3.4   65   68-133   115-185 (288)
446 COG0478 RIO-like serine/threon  97.8 8.5E-05 1.8E-09   50.2   5.6   87   37-133   154-242 (304)
447 cd05154 ACAD10_11_like Acyl-Co  97.8 9.9E-05 2.1E-09   48.0   5.9   16  113-128   175-190 (223)
448 PRK09902 hypothetical protein;  97.7  0.0005 1.1E-08   45.0   8.8   65   67-131   100-166 (216)
449 KOG1033|consensus               97.5 2.5E-05 5.5E-10   56.5   0.1   67   65-134   329-397 (516)
450 KOG0601|consensus               97.5 8.5E-05 1.8E-09   54.4   2.6   79   50-129   324-402 (524)
451 KOG1235|consensus               97.5 0.00085 1.8E-08   49.6   7.6  101   25-129   221-337 (538)
452 KOG0601|consensus               97.4 0.00016 3.5E-09   53.0   3.3   78   51-129   177-258 (524)
453 PF12260 PIP49_C:  Protein-kina  97.1  0.0019 4.1E-08   41.6   5.8   89   42-134     9-103 (188)
454 COG0661 AarF Predicted unusual  97.0  0.0033 7.2E-08   46.5   6.4   66   65-132   239-304 (517)
455 PF10707 YrbL-PhoP_reg:  PhoP r  96.9   0.021 4.5E-07   37.2   9.1   74   50-129    75-154 (199)
456 KOG0606|consensus               96.4  0.0025 5.4E-08   50.4   2.3   32  103-134   153-184 (1205)
457 KOG0584|consensus               96.0  0.0018 3.9E-08   48.2  -0.1   35    5-39     80-114 (632)
458 cd05150 APH Aminoglycoside 3'-  95.6    0.12 2.6E-06   34.3   7.5   27   54-80     54-80  (244)
459 TIGR02172 Fb_sc_TIGR02172 Fibr  95.6    0.19 4.1E-06   33.4   8.2   38   40-77     40-79  (226)
460 COG1718 RIO1 Serine/threonine   95.4   0.075 1.6E-06   35.9   5.8   61   67-129   141-203 (268)
461 KOG0606|consensus               95.3  0.0064 1.4E-07   48.2   0.8   83   50-133   862-944 (1205)
462 KOG0575|consensus               94.6  0.0048   1E-07   45.8  -1.4   35    4-38     56-90  (592)
463 KOG0585|consensus               94.6  0.0078 1.7E-07   43.9  -0.4   25   10-34    152-176 (576)
464 KOG0659|consensus               94.5   0.031 6.7E-07   38.1   2.2   29   10-38     45-73  (318)
465 KOG0615|consensus               93.9  0.0071 1.5E-07   43.3  -1.7   27   12-38    222-248 (475)
466 KOG0591|consensus               93.7   0.036 7.7E-07   38.2   1.3   18   39-56     65-82  (375)
467 KOG0666|consensus               92.9   0.096 2.1E-06   36.7   2.4   29   10-38     71-99  (438)
468 KOG0665|consensus               92.5  0.0079 1.7E-07   41.8  -3.2   30    9-38     58-87  (369)
469 KOG0586|consensus               92.3   0.048   1E-06   40.8   0.4   29   10-38     99-127 (596)
470 KOG0576|consensus               91.8   0.045 9.7E-07   41.8  -0.2   91   23-118   269-361 (829)
471 KOG2268|consensus               91.7    0.18 3.9E-06   35.9   2.6   85   38-133   156-242 (465)
472 KOG0033|consensus               91.5   0.094   2E-06   35.6   1.1   29    7-35     51-79  (355)
473 COG4248 Uncharacterized protei  91.4    0.65 1.4E-05   34.3   5.2   67   67-133    85-157 (637)
474 KOG0589|consensus               90.9   0.081 1.8E-06   38.4   0.3   32    7-38     44-75  (426)
475 KOG0198|consensus               90.6   0.056 1.2E-06   37.7  -0.6   25   10-34     58-82  (313)
476 PF07387 Seadorna_VP7:  Seadorn  89.8     0.3 6.6E-06   32.9   2.3   31  104-134   152-184 (308)
477 PLN02876 acyl-CoA dehydrogenas  89.4     1.1 2.4E-05   35.6   5.4   39   40-78     86-130 (822)
478 KOG4717|consensus               86.8    0.24 5.3E-06   37.2   0.5   29   10-38     61-89  (864)
479 cd05153 HomoserineK_II Homoser  86.1     0.6 1.3E-05   31.9   2.1   20  112-131   175-194 (296)
480 KOG0032|consensus               86.0   0.058 1.3E-06   38.7  -3.0   30    9-38     78-108 (382)
481 cd05157 ETNK_euk Ethanolamine   86.0    0.46 9.9E-06   31.3   1.4   16  113-128   171-186 (235)
482 PHA03111 Ser/Thr kinase; Provi  85.9     2.3   5E-05   30.5   4.8   39   92-130   278-320 (444)
483 cd07839 STKc_CDK5 Catalytic do  85.9    0.36 7.9E-06   32.5   0.9   28   10-37     43-70  (284)
484 PHA03212 serine/threonine kina  85.9   0.094   2E-06   37.6  -2.0   26   10-35    127-152 (391)
485 KOG2270|consensus               85.9     4.4 9.6E-05   29.7   6.2   88   39-130   213-302 (520)
486 PRK05231 homoserine kinase; Pr  85.5    0.68 1.5E-05   32.1   2.1   19  112-130   187-205 (319)
487 PRK14559 putative protein seri  85.3     5.9 0.00013   30.8   7.1   81   50-132   178-259 (645)
488 PF05445 Pox_ser-thr_kin:  Poxv  84.7    0.62 1.3E-05   33.4   1.6   37   92-130   274-316 (434)
489 TIGR00938 thrB_alt homoserine   84.0    0.87 1.9E-05   31.5   2.1   20  112-131   187-206 (307)
490 cd05156 ChoK_euk Choline Kinas  83.8    0.63 1.4E-05   32.0   1.4   17  113-129   180-196 (302)
491 cd05155 APH_ChoK_like_1 Unchar  83.5    0.83 1.8E-05   30.3   1.8   18  113-130   165-182 (235)
492 PRK10271 thiK thiamine kinase;  83.1    0.97 2.1E-05   29.3   1.9   17  114-130    79-95  (188)
493 TIGR02721 ycfN_thiK thiamine k  82.3    0.99 2.1E-05   30.3   1.8   18  113-130   147-164 (256)
494 TIGR02906 spore_CotS spore coa  82.3     3.7   8E-05   28.2   4.7   18  112-129   187-204 (313)
495 PF01636 APH:  Phosphotransfera  81.4    0.74 1.6E-05   29.8   1.0   20  113-132   167-187 (239)
496 cd07871 STKc_PCTAIRE3 Catalyti  81.3    0.14 3.1E-06   34.7  -2.5   27    9-35     46-72  (288)
497 cd05152 MPH2' Macrolide 2'-Pho  80.6     1.4 3.1E-05   30.2   2.1   19  113-131   186-204 (276)
498 KOG2137|consensus               79.2     1.1 2.4E-05   34.6   1.3   35  100-134   106-141 (700)
499 TIGR02904 spore_ysxE spore coa  78.6       1 2.2E-05   31.2   0.9   19  113-131   197-215 (309)
500 KOG1989|consensus               78.2     1.6 3.5E-05   34.2   1.9   39   36-74     78-118 (738)

No 1  
>KOG0595|consensus
Probab=99.92  E-value=1.2e-24  Score=148.80  Aligned_cols=91  Identities=35%  Similarity=0.593  Sum_probs=81.6

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....||.+++.++|||||.+++++.+++++|+|||||.+|+|..++.. .+.+++..++.++.|++.|++++|+++|+||
T Consensus        55 ~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~-~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHR  133 (429)
T KOG0595|consen   55 LLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRR-RGRLPEATARHFMQQLASALQFLHENNIIHR  133 (429)
T ss_pred             HHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence            345567777777777777799999999999999999999999999876 4589999999999999999999999999999


Q ss_pred             CCCCCCeEEecC
Q psy15406        118 DLKAGNVLLTMS  129 (134)
Q Consensus       118 dik~~nill~~~  129 (134)
                      |+||+||++...
T Consensus       134 DLKPQNiLLs~~  145 (429)
T KOG0595|consen  134 DLKPQNILLSTT  145 (429)
T ss_pred             cCCcceEEeccC
Confidence            999999999765


No 2  
>KOG0615|consensus
Probab=99.90  E-value=2.2e-23  Score=143.01  Aligned_cols=89  Identities=30%  Similarity=0.527  Sum_probs=79.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .+|++||+.++||||++++++|....+.|+||||+.||.|.+.+.. +..+.+.....++.|++.|+.|+|+.||+||||
T Consensus       224 ~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~-nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDi  302 (475)
T KOG0615|consen  224 QNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVA-NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDI  302 (475)
T ss_pred             HHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHh-ccccccchhHHHHHHHHHHHHHHHHcCcccccC
Confidence            4677777778888888899999999999999999999999988765 467888888999999999999999999999999


Q ss_pred             CCCCeEEecC
Q psy15406        120 KAGNVLLTMS  129 (134)
Q Consensus       120 k~~nill~~~  129 (134)
                      ||+|||+..+
T Consensus       303 KPeNILl~~~  312 (475)
T KOG0615|consen  303 KPENILLSND  312 (475)
T ss_pred             CcceEEeccC
Confidence            9999999755


No 3  
>KOG0592|consensus
Probab=99.90  E-value=3e-23  Score=146.25  Aligned_cols=112  Identities=27%  Similarity=0.460  Sum_probs=96.5

Q ss_pred             HhhcCchhHHHHHHHHHhchHHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHH
Q psy15406         20 LSDCKHENIVQLYEAFFTNGKLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYI   98 (134)
Q Consensus        20 ~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~   98 (134)
                      ++-|...+|++  +..++-..+|-+.|..+ +||+|++++..|.++..+|+++||+++|.|.+++... +.+++..++.+
T Consensus       103 iKVl~K~~Iik--e~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~-Gsfde~caR~Y  179 (604)
T KOG0592|consen  103 IKVLDKRYIIK--EKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKY-GSFDETCARFY  179 (604)
T ss_pred             HhhhhHHHHHh--hcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHh-CcchHHHHHHH
Confidence            33444455554  33344456677888888 7999999999999999999999999999999998664 78999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         99 CHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        99 ~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ..+|+.++.|||++||+|||+||+|||++.+|+++|
T Consensus       180 AAeIldAleylH~~GIIHRDlKPENILLd~dmhikI  215 (604)
T KOG0592|consen  180 AAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKI  215 (604)
T ss_pred             HHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEE
Confidence            999999999999999999999999999999999876


No 4  
>KOG0598|consensus
Probab=99.90  E-value=2.5e-23  Score=140.70  Aligned_cols=117  Identities=32%  Similarity=0.445  Sum_probs=102.4

Q ss_pred             HHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHH
Q psy15406         15 IEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQ   94 (134)
Q Consensus        15 ~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~   94 (134)
                      +.+.+|+-|+...|+.-  .-.+....|..|+..++||+|++++..|++...+|+|++|+.||.|...+. ..+.+++..
T Consensus        50 ~kiYAmKvl~K~~iv~~--~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~-~eg~F~E~~  126 (357)
T KOG0598|consen   50 GKIYAMKVLKKKKIVEK--KEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQ-REGRFSEDR  126 (357)
T ss_pred             CceeehhhhhhhHhhhh--hhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHH-hcCCcchhH
Confidence            34556777777777763  334566788999999999999999999999999999999999999987764 457899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         95 IRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        95 ~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++.++..++.|+.|||+.||+|||+||+|||++..|.+++
T Consensus       127 arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~L  166 (357)
T KOG0598|consen  127 ARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKL  166 (357)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEE
Confidence            9999999999999999999999999999999999999874


No 5  
>KOG0575|consensus
Probab=99.89  E-value=5e-23  Score=146.47  Aligned_cols=96  Identities=35%  Similarity=0.610  Sum_probs=89.2

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      +..+||+|+++++||||++++++|.+...+|++.|+|..+++..+.. ....+.+..++.++.||+.|+.|+|+.+|+||
T Consensus        64 Kv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHR  142 (592)
T KOG0575|consen   64 KVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHR  142 (592)
T ss_pred             HHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceec
Confidence            45678888888999999999999999999999999999999998875 56889999999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |+|.+|++++++.++||
T Consensus       143 DLKLGNlfL~~~~~VKI  159 (592)
T KOG0575|consen  143 DLKLGNLFLNENMNVKI  159 (592)
T ss_pred             ccchhheeecCcCcEEe
Confidence            99999999999998886


No 6  
>KOG0581|consensus
Probab=99.89  E-value=3.6e-23  Score=140.05  Aligned_cols=94  Identities=34%  Similarity=0.680  Sum_probs=81.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCC-EEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNG-KLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~  117 (134)
                      .+|+++++.++||+||.+|+.|...+ ..+++||||.+|+|+..+... +.+++.....++.+++.|+.|+|. .+|+||
T Consensus       125 ~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHR  203 (364)
T KOG0581|consen  125 LRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERKIIHR  203 (364)
T ss_pred             HHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccCeeec
Confidence            44555555555566666999999988 499999999999999987653 679999999999999999999996 899999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      ||||+|+|++..|.+||
T Consensus       204 DIKPsNlLvNskGeVKi  220 (364)
T KOG0581|consen  204 DIKPSNLLVNSKGEVKI  220 (364)
T ss_pred             cCCHHHeeeccCCCEEe
Confidence            99999999999999986


No 7  
>KOG0611|consensus
Probab=99.89  E-value=4.6e-23  Score=142.13  Aligned_cols=95  Identities=33%  Similarity=0.595  Sum_probs=87.6

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      -.+||+||+.++||||+++|..|..++...+||||..+|.|++++.. .+.+++..++.+++||+.++-|+|.++++|||
T Consensus       100 IRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSe-r~~LsErEaRhfFRQIvSAVhYCHknrVvHRD  178 (668)
T KOG0611|consen  100 IRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISE-RGSLSEREARHFFRQIVSAVHYCHKNRVVHRD  178 (668)
T ss_pred             HHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHH-hccccHHHHHHHHHHHHHHHHHHhhccceecc
Confidence            45678888888888888899999999999999999999999999876 47899999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +|.+||+++.++++||
T Consensus       179 LKLENILLD~N~NiKI  194 (668)
T KOG0611|consen  179 LKLENILLDQNNNIKI  194 (668)
T ss_pred             cchhheeecCCCCeee
Confidence            9999999999999986


No 8  
>KOG0616|consensus
Probab=99.89  E-value=1.7e-22  Score=133.85  Aligned_cols=114  Identities=28%  Similarity=0.477  Sum_probs=102.4

Q ss_pred             HHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHH
Q psy15406         18 DILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRY   97 (134)
Q Consensus        18 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~   97 (134)
                      .+|+.|+.+.||++-+.  ...-.|..+++.+.||+++.+++.+.+.+.+|++|||.+||.+.+++.+ .+++++..++.
T Consensus        72 YAmKvL~k~~vVklKQv--eH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk-~~rF~e~~arF  148 (355)
T KOG0616|consen   72 YAMKVLDKQKVVKLKQV--EHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRK-SGRFSEPHARF  148 (355)
T ss_pred             eehhhcCHHHHHHHHHH--HHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHh-cCCCCchhHHH
Confidence            45777788888886543  4556678899999999999999999999999999999999999999876 47899999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         98 ICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        98 ~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++.+++.|+.|+|+++|++||+||+|||++.+|.+||
T Consensus       149 YAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKi  185 (355)
T KOG0616|consen  149 YAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKI  185 (355)
T ss_pred             HHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEE
Confidence            9999999999999999999999999999999999875


No 9  
>KOG0610|consensus
Probab=99.89  E-value=1.6e-22  Score=138.73  Aligned_cols=100  Identities=28%  Similarity=0.444  Sum_probs=90.2

Q ss_pred             HHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHC
Q psy15406         34 AFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE-LEKPLTEQQIRYICHYMCKALQFLHTH  112 (134)
Q Consensus        34 ~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~  112 (134)
                      ..+.++..|-+||+.++||+++.+|..|..+...|++||||+||+|..+... .+..+++..++.++..++.|+.|||..
T Consensus       119 kKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml  198 (459)
T KOG0610|consen  119 KKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML  198 (459)
T ss_pred             hHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh
Confidence            3345567788999999999999999999999999999999999999987654 345789999999999999999999999


Q ss_pred             CCccCCCCCCCeEEecCCeee
Q psy15406        113 RVIHRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus       113 ~i~h~dik~~nill~~~~~~~  133 (134)
                      ||+.||+||+|||+.++|.+-
T Consensus       199 GivYRDLKPENILvredGHIM  219 (459)
T KOG0610|consen  199 GIVYRDLKPENILVREDGHIM  219 (459)
T ss_pred             ceeeccCCcceeEEecCCcEE
Confidence            999999999999999999874


No 10 
>KOG0600|consensus
Probab=99.88  E-value=1.5e-22  Score=141.80  Aligned_cols=95  Identities=28%  Similarity=0.507  Sum_probs=78.0

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      +.+||.||++++||||+++.+.....  +.+|+|+||++. +|.-+.....-.+++.++.+++.|++.|+.|+|.+|++|
T Consensus       163 ~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlH  241 (560)
T KOG0600|consen  163 AIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLH  241 (560)
T ss_pred             HHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeee
Confidence            34555555555555555588777765  789999999987 565565554557999999999999999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      ||||.+|||++.+|.+||
T Consensus       242 RDIK~SNiLidn~G~LKi  259 (560)
T KOG0600|consen  242 RDIKGSNILIDNNGVLKI  259 (560)
T ss_pred             ccccccceEEcCCCCEEe
Confidence            999999999999999886


No 11 
>KOG0192|consensus
Probab=99.88  E-value=2.8e-22  Score=139.19  Aligned_cols=99  Identities=30%  Similarity=0.539  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCC-EEEEEEeccCCCCHHHHHHH-hC
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNG-KLWMLIEYCDGGAVDSIMLE-LE   87 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~l~~~~~~-~~   87 (134)
                      .++|.+|+.+|++++|||||.                          +++.+.... .+++||||+++|+|..++.. ..
T Consensus        83 ~~~f~~E~~il~~l~HpNIV~--------------------------f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~  136 (362)
T KOG0192|consen   83 RKAFRREASLLSRLRHPNIVQ--------------------------FYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRK  136 (362)
T ss_pred             HHHHHHHHHHHHhCCCCCeee--------------------------EEEEEcCCCCceEEEEEeCCCCcHHHHHhhccc
Confidence            456667777776666666666                          888888776 79999999999999999877 36


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCCCCeEEecCC-eeeC
Q psy15406         88 KPLTEQQIRYICHYMCKALQFLHTHR-VIHRDLKAGNVLLTMSG-GVKL  134 (134)
Q Consensus        88 ~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dik~~nill~~~~-~~~i  134 (134)
                      ..++......++.+++.|+.|+|+++ |+|||+||+|+|++.++ .+||
T Consensus       137 ~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI  185 (362)
T KOG0192|consen  137 RKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKI  185 (362)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEE
Confidence            78999999999999999999999999 99999999999999997 7775


No 12 
>KOG0582|consensus
Probab=99.88  E-value=4.4e-22  Score=137.82  Aligned_cols=95  Identities=35%  Similarity=0.569  Sum_probs=80.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      .+|+..|+.++||||+.++.+|..+..+|+||.++.+|++.+++... ...+.+..+..++++++.|+.|+|.+|.+|||
T Consensus        72 ~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRd  151 (516)
T KOG0582|consen   72 RKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRD  151 (516)
T ss_pred             HHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence            34444444445555555999999999999999999999999988653 34689999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +|++||+++++|.++|
T Consensus       152 vKAgnILi~~dG~VkL  167 (516)
T KOG0582|consen  152 VKAGNILIDSDGTVKL  167 (516)
T ss_pred             cccccEEEcCCCcEEE
Confidence            9999999999999985


No 13 
>KOG0583|consensus
Probab=99.88  E-value=3.3e-22  Score=139.53  Aligned_cols=96  Identities=34%  Similarity=0.592  Sum_probs=88.3

Q ss_pred             chHHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         38 NGKLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        38 ~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ..++|+.+++.+. ||||++++..+.+....|++|||+.+|.|.+.+.+ .+.+.+..+..++.|++.|+.|+|+.|++|
T Consensus        65 ~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~H  143 (370)
T KOG0583|consen   65 LIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVH  143 (370)
T ss_pred             hhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEee
Confidence            3447888888888 88999999999999999999999999999999987 678999999999999999999999999999


Q ss_pred             CCCCCCCeEEecC-CeeeC
Q psy15406        117 RDLKAGNVLLTMS-GGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~-~~~~i  134 (134)
                      ||+||+|++++.+ +++||
T Consensus       144 RDLK~ENilld~~~~~~Kl  162 (370)
T KOG0583|consen  144 RDLKPENILLDGNEGNLKL  162 (370)
T ss_pred             CCCCHHHEEecCCCCCEEE
Confidence            9999999999998 88875


No 14 
>KOG0605|consensus
Probab=99.86  E-value=1.4e-21  Score=137.58  Aligned_cols=98  Identities=29%  Similarity=0.498  Sum_probs=90.7

Q ss_pred             HhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         36 FTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        36 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      +.....|-+||...+.+.+|+++..|++...+|++|||++||++.+++.. ...+++..++.++.+.+.|+.-+|..|++
T Consensus       185 v~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~-~~~L~e~~arfYiaE~vlAI~~iH~~gyI  263 (550)
T KOG0605|consen  185 VEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMR-KDTLTEDWARFYIAETVLAIESIHQLGYI  263 (550)
T ss_pred             HHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHh-cCcCchHHHHHHHHHHHHHHHHHHHcCcc
Confidence            34456678999999999999999999999999999999999999998865 47899999999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      ||||||+|+|++..|.+|+
T Consensus       264 HRDIKPdNlLiD~~GHiKL  282 (550)
T KOG0605|consen  264 HRDIKPDNLLIDAKGHIKL  282 (550)
T ss_pred             cccCChhheeecCCCCEee
Confidence            9999999999999999985


No 15 
>KOG0197|consensus
Probab=99.86  E-value=1.5e-21  Score=137.01  Aligned_cols=101  Identities=24%  Similarity=0.383  Sum_probs=88.5

Q ss_pred             hHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH-h
Q psy15406          8 EELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE-L   86 (134)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~   86 (134)
                      ...++|.+|+++|++|+|+++|+                          +++.+..+..+||||||++.|+|.+++.. .
T Consensus       243 m~~~~f~~Ea~iMk~L~H~~lV~--------------------------l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~  296 (468)
T KOG0197|consen  243 MSPEAFLREAQIMKKLRHEKLVK--------------------------LYGVCTKQEPIYIVTEYMPKGSLLDYLRTRE  296 (468)
T ss_pred             cChhHHHHHHHHHHhCcccCeEE--------------------------EEEEEecCCceEEEEEecccCcHHHHhhhcC
Confidence            34567777777777777777776                          99999998899999999999999999876 3


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         87 EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        87 ~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +..+.......++.||+.|+.||.+++++|||+.+.|||++.+..+||
T Consensus       297 ~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKI  344 (468)
T KOG0197|consen  297 GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKI  344 (468)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEE
Confidence            456788999999999999999999999999999999999999999886


No 16 
>KOG0198|consensus
Probab=99.86  E-value=5.9e-21  Score=129.72  Aligned_cols=96  Identities=31%  Similarity=0.503  Sum_probs=79.6

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCC--EEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNG--KLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ..+|+.+|++++|||||++++......  .++++|||+++|++.+.+...+..+++..+..+..|++.|+.|+|++|++|
T Consensus        61 l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH  140 (313)
T KOG0198|consen   61 LEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVH  140 (313)
T ss_pred             HHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence            345666666666666666777644333  689999999999999998775447899999999999999999999999999


Q ss_pred             CCCCCCCeEEec-CCeeeC
Q psy15406        117 RDLKAGNVLLTM-SGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~-~~~~~i  134 (134)
                      +||||+||+++. +|.+||
T Consensus       141 ~DiK~~NiLl~~~~~~~Kl  159 (313)
T KOG0198|consen  141 CDIKPANILLDPSNGDVKL  159 (313)
T ss_pred             cCcccceEEEeCCCCeEEe
Confidence            999999999998 688775


No 17 
>KOG0593|consensus
Probab=99.85  E-value=3.8e-21  Score=128.06  Aligned_cols=101  Identities=33%  Similarity=0.504  Sum_probs=85.9

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL   86 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   86 (134)
                      +...+-++||++++++++|||+|.+.++|.+                          +..+++|+|||....|+.+ ...
T Consensus        42 ~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr--------------------------krklhLVFE~~dhTvL~eL-e~~   94 (396)
T KOG0593|consen   42 PVVKKIALREIRMLKQLKHENLVNLIEVFRR--------------------------KRKLHLVFEYCDHTVLHEL-ERY   94 (396)
T ss_pred             HHHHHHHHHHHHHHHhcccchHHHHHHHHHh--------------------------cceeEEEeeecchHHHHHH-Hhc
Confidence            4445677899999999999999997776654                          4669999999998666654 344


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         87 EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        87 ~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ...++...+..+.+|++.|+.|+|.++++||||||+||++..+|.+|+
T Consensus        95 p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKL  142 (396)
T KOG0593|consen   95 PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKL  142 (396)
T ss_pred             cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEe
Confidence            567899999999999999999999999999999999999999998875


No 18 
>KOG0591|consensus
Probab=99.85  E-value=4.3e-21  Score=126.80  Aligned_cols=103  Identities=33%  Similarity=0.597  Sum_probs=81.8

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeC-CEEEEEEeccCCCCHHHHHH-
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTN-GKLWMLIEYCDGGAVDSIML-   84 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~l~~~~~-   84 (134)
                      .++..+...|+.+|++|+|||||++|+-                         .|..+ ..++++||+|..|+|...+. 
T Consensus        59 ~k~rq~~v~Ei~lLkQL~HpNIVqYy~~-------------------------~f~~~~evlnivmE~c~~GDLsqmIk~  113 (375)
T KOG0591|consen   59 AKARQDCVKEISLLKQLNHPNIVQYYAH-------------------------SFIEDNEVLNIVMELCDAGDLSQMIKH  113 (375)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHH-------------------------hhhccchhhHHHHHhhcccCHHHHHHH
Confidence            4556667777777777777777776652                         22222 33889999999999987764 


Q ss_pred             --HhCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CccCCCCCCCeEEecCCeeeC
Q psy15406         85 --ELEKPLTEQQIRYICHYMCKALQFLHT--HR--VIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        85 --~~~~~~~~~~~~~~~~~i~~~l~~lh~--~~--i~h~dik~~nill~~~~~~~i  134 (134)
                        +..+.+++..++.++.|++.|+..+|.  ..  +.||||||.||+++.+|.+|+
T Consensus       114 ~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL  169 (375)
T KOG0591|consen  114 FKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL  169 (375)
T ss_pred             HHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence              334568999999999999999999998  33  899999999999999999885


No 19 
>KOG0661|consensus
Probab=99.85  E-value=2.9e-21  Score=134.63  Aligned_cols=92  Identities=28%  Similarity=0.472  Sum_probs=74.8

Q ss_pred             HHHHHhhCC-CCCccccceeeeeCC-EEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         42 WIDILSDCK-HENIVQLYEAFFTNG-KLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        42 ~~~~~~~~~-h~~i~~~~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      |++-+++++ ||||+++...+.+.+ .+|+||||+.. +|++++..+++.+++..++.++.|++.|+.|+|.+|+.|||+
T Consensus        58 EvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDl  136 (538)
T KOG0661|consen   58 EVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDL  136 (538)
T ss_pred             HHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence            344444444 444444666666555 89999999976 799999988889999999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+|||+.....+||
T Consensus       137 KPENiLi~~~~~iKi  151 (538)
T KOG0661|consen  137 KPENILISGNDVIKI  151 (538)
T ss_pred             ChhheEecccceeEe
Confidence            999999986666654


No 20 
>KOG0585|consensus
Probab=99.84  E-value=6.5e-21  Score=133.06  Aligned_cols=94  Identities=38%  Similarity=0.618  Sum_probs=77.5

Q ss_pred             hHHHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLELEKP-LTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      ..+||.||+++.|+|||++..+..+  ...+|+|+|||..|.+...  ..... +.+.+++.++..++.|+.|||.+||+
T Consensus       155 v~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~--p~d~~els~~~Ar~ylrDvv~GLEYLH~Qgii  232 (576)
T KOG0585|consen  155 VRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWC--PPDKPELSEQQARKYLRDVVLGLEYLHYQGII  232 (576)
T ss_pred             HHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccC--CCCcccccHHHHHHHHHHHHHHHHHHHhcCee
Confidence            4566777777777777778877765  3569999999998876532  11233 78999999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      ||||||+|+|++++|.+||
T Consensus       233 HRDIKPsNLLl~~~g~VKI  251 (576)
T KOG0585|consen  233 HRDIKPSNLLLSSDGTVKI  251 (576)
T ss_pred             ccccchhheEEcCCCcEEe
Confidence            9999999999999999986


No 21 
>KOG1187|consensus
Probab=99.84  E-value=8.4e-21  Score=132.21  Aligned_cols=99  Identities=29%  Similarity=0.468  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCC-EEEEEEeccCCCCHHHHHHHhCC
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNG-KLWMLIEYCDGGAVDSIMLELEK   88 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~~   88 (134)
                      ..+|..|++++++++|||+|+                          +.++|...+ ..++|+||+++|+|.+.+.....
T Consensus       115 ~~eF~~Ei~~ls~l~H~Nlv~--------------------------LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~  168 (361)
T KOG1187|consen  115 EREFLNEVEILSRLRHPNLVK--------------------------LLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKG  168 (361)
T ss_pred             hhHHHHHHHHHhcCCCcCccc--------------------------EEEEEecCCceEEEEEEccCCCCHHHHhCCCCC
Confidence            455888888888877777777                          999999888 59999999999999998876544


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCCCCeEEecCCeeeC
Q psy15406         89 -PLTEQQIRYICHYMCKALQFLHTHR---VIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        89 -~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dik~~nill~~~~~~~i  134 (134)
                       .++|.....++.+++.|+.|||...   ++|||||++||++|.+..+||
T Consensus       169 ~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl  218 (361)
T KOG1187|consen  169 EPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL  218 (361)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence             7899999999999999999999753   999999999999999998885


No 22 
>KOG0659|consensus
Probab=99.83  E-value=2e-20  Score=122.49  Aligned_cols=95  Identities=25%  Similarity=0.459  Sum_probs=80.8

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      +.+||++++.++|+||+.+.+.|.+.+.+.+|+||++. +|...+.+....++...+..++.+++.|+.|+|.+.|+|||
T Consensus        48 alREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRD  126 (318)
T KOG0659|consen   48 ALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRD  126 (318)
T ss_pred             HHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence            34455555555555555588888999999999999976 78888887777889999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||.|++++++|.+||
T Consensus       127 lKPnNLLis~~g~lKi  142 (318)
T KOG0659|consen  127 LKPNNLLISSDGQLKI  142 (318)
T ss_pred             CCccceEEcCCCcEEe
Confidence            9999999999999885


No 23 
>KOG0599|consensus
Probab=99.83  E-value=7.2e-21  Score=125.58  Aligned_cols=95  Identities=23%  Similarity=0.460  Sum_probs=87.7

Q ss_pred             hHHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..+|++|++++ .||+|+++.+.+.++.++++|++.++.|.|.+++.+ .-.+++..+..+++|+..++.|+|.+.|+||
T Consensus        69 T~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~IVHR  147 (411)
T KOG0599|consen   69 TRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARNIVHR  147 (411)
T ss_pred             HHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence            46789999997 599999999999999999999999999999998754 4578999999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |+||+||+++++.+++|
T Consensus       148 DLKpENILlddn~~i~i  164 (411)
T KOG0599|consen  148 DLKPENILLDDNMNIKI  164 (411)
T ss_pred             ccChhheeeccccceEE
Confidence            99999999999988875


No 24 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.83  E-value=3.5e-20  Score=129.95  Aligned_cols=96  Identities=26%  Similarity=0.477  Sum_probs=84.6

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+++++.++|||++++++.+.+....|++|||+++|+|..++.. ...+++..+..++.|++.|+.|+|+.|++||
T Consensus        47 ~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHr  125 (377)
T cd05629          47 HVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHKLGFIHR  125 (377)
T ss_pred             HHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            345577777788888888899999999999999999999999988754 4678899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      ||||+||+++.++.+++
T Consensus       126 Dlkp~NIll~~~~~~kl  142 (377)
T cd05629         126 DIKPDNILIDRGGHIKL  142 (377)
T ss_pred             CCCHHHEEECCCCCEEE
Confidence            99999999998887764


No 25 
>KOG0578|consensus
Probab=99.83  E-value=1.8e-20  Score=132.68  Aligned_cols=96  Identities=39%  Similarity=0.769  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCC
Q psy15406         11 SDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPL   90 (134)
Q Consensus        11 ~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~   90 (134)
                      +=.+.|+.+|+..+|+|||.++++|                          ..++.+|+||||+++|+|.+.+..  ..+
T Consensus       315 eLilnEi~Vm~~~~H~NiVnfl~Sy--------------------------lv~deLWVVMEym~ggsLTDvVt~--~~~  366 (550)
T KOG0578|consen  315 ELLLNEILVMRDLHHPNIVNFLDSY--------------------------LVGDELWVVMEYMEGGSLTDVVTK--TRM  366 (550)
T ss_pred             hhhHHHHHHHHhccchHHHHHHHHh--------------------------cccceeEEEEeecCCCchhhhhhc--ccc
Confidence            3345899999999999999866554                          344779999999999999887754  458


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         91 TEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        91 ~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+.++..+.++++.|+.|+|.+||+|||||.+||+++.+|.+||
T Consensus       367 ~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKl  410 (550)
T KOG0578|consen  367 TEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKL  410 (550)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEE
Confidence            99999999999999999999999999999999999999999885


No 26 
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.83  E-value=5e-20  Score=123.56  Aligned_cols=94  Identities=23%  Similarity=0.312  Sum_probs=80.1

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+..++.++|||++++++.+..+...+++|||+++|++.+++......+++.....++.|++.|+.|+|+.|++|+|+|
T Consensus        55 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dik  134 (266)
T cd05064          55 AEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLA  134 (266)
T ss_pred             HHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence            34555555566666669999998899999999999999998876644568899999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.+++
T Consensus       135 p~nili~~~~~~~l  148 (266)
T cd05064         135 AHKVLVNSDLVCKI  148 (266)
T ss_pred             HhhEEEcCCCcEEE
Confidence            99999998887754


No 27 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.83  E-value=5.4e-20  Score=127.60  Aligned_cols=95  Identities=23%  Similarity=0.360  Sum_probs=84.4

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|||++++++.+..+...|++|||+++|+|..++.. ...+++..+..++.|++.++.|+|+.|++|||
T Consensus        78 ~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  156 (340)
T PTZ00426         78 VFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRD  156 (340)
T ss_pred             HHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccC
Confidence            34567777788888888899999999999999999999999888754 45788999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+||+++.+|.++|
T Consensus       157 Lkp~NILl~~~~~ikL  172 (340)
T PTZ00426        157 LKPENLLLDKDGFIKM  172 (340)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999998888764


No 28 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.83  E-value=5.1e-20  Score=126.80  Aligned_cols=95  Identities=27%  Similarity=0.461  Sum_probs=83.9

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|||++.+++.+..+...|++|||++++++...+.. ...+++..+..++.|++.|+.|+|+.|++|||
T Consensus        42 ~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD  120 (323)
T cd05571          42 TLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRD  120 (323)
T ss_pred             HHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence            34567777778888888899999999999999999999999887754 46788999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       121 lkp~NIll~~~~~~kl  136 (323)
T cd05571         121 LKLENLMLDKDGHIKI  136 (323)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999999888764


No 29 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.83  E-value=6.9e-20  Score=126.18  Aligned_cols=94  Identities=29%  Similarity=0.494  Sum_probs=82.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|||++++++.+......|++|||+++|++...+.. ...+++..+..++.|++.|+.|+|+.|++||||
T Consensus        43 ~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl  121 (323)
T cd05595          43 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDI  121 (323)
T ss_pred             HHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            4466777777777777799999999999999999999999877654 457889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       122 kp~NIll~~~~~~kL  136 (323)
T cd05595         122 KLENLMLDKDGHIKI  136 (323)
T ss_pred             CHHHEEEcCCCCEEe
Confidence            999999998888764


No 30 
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.82  E-value=6.2e-20  Score=128.95  Aligned_cols=96  Identities=29%  Similarity=0.533  Sum_probs=83.6

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+.+++.++|+|++++++.+.+....|++|||+++|+|..++.. ...+++..+..++.|++.|+.|+|..|++||
T Consensus        47 ~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~~LH~~givHr  125 (381)
T cd05626          47 HVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MEVFPEVLARFYIAELTLAIESVHKMGFIHR  125 (381)
T ss_pred             HHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            345566777777777777799999999999999999999999888754 4568899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      ||||+||+++.+|.++|
T Consensus       126 DlKp~Nili~~~~~~kL  142 (381)
T cd05626         126 DIKPDNILIDLDGHIKL  142 (381)
T ss_pred             CCcHHHEEECCCCCEEE
Confidence            99999999998888764


No 31 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.82  E-value=6.1e-20  Score=124.71  Aligned_cols=91  Identities=29%  Similarity=0.485  Sum_probs=73.9

Q ss_pred             HHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q psy15406         43 IDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAG  122 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~  122 (134)
                      +.+++.++|||++++++.+.++...|++|||+++++|.+++.. ...+++.....++.|++.|+.|+|++|++|+||||+
T Consensus        52 ~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  130 (291)
T cd05612          52 KRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPE  130 (291)
T ss_pred             HHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHH
Confidence            3333344444444466666777889999999999999988755 457888999999999999999999999999999999


Q ss_pred             CeEEecCCeeeC
Q psy15406        123 NVLLTMSGGVKL  134 (134)
Q Consensus       123 nill~~~~~~~i  134 (134)
                      ||+++.+|.++|
T Consensus       131 NIli~~~~~~kl  142 (291)
T cd05612         131 NILLDKEGHIKL  142 (291)
T ss_pred             HeEECCCCCEEE
Confidence            999998888764


No 32 
>KOG0194|consensus
Probab=99.82  E-value=2.2e-20  Score=132.40  Aligned_cols=102  Identities=29%  Similarity=0.587  Sum_probs=91.7

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL   86 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   86 (134)
                      ..+.++|+.|+++|++++|||||+                          ++|....+.+++++||+|.+|+|.+++.+.
T Consensus       202 ~~~~~e~m~EArvMr~l~H~NVVr--------------------------~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~  255 (474)
T KOG0194|consen  202 KEQIKEFMKEARVMRQLNHPNVVR--------------------------FYGVAVLEEPLMLVMELCNGGSLDDYLKKN  255 (474)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEE--------------------------EEEEEcCCCccEEEEEecCCCcHHHHHHhC
Confidence            456788888888888888888887                          899999999999999999999999999876


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         87 EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        87 ~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ...++......++.+.+.|+.|||+++++||||.++|+|+..++.+||
T Consensus       256 ~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKI  303 (474)
T KOG0194|consen  256 KKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKI  303 (474)
T ss_pred             CCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEe
Confidence            556888899999999999999999999999999999999998887765


No 33 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.82  E-value=6.3e-20  Score=128.88  Aligned_cols=96  Identities=29%  Similarity=0.510  Sum_probs=85.1

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+++++.++|+|++++++.+.++...|++|||+++|+|...+.. ...+++..+..++.|++.|+.|+|+.|++||
T Consensus        47 ~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~al~~lH~~~ivHr  125 (382)
T cd05625          47 HVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MGIFPEDLARFYIAELTCAVESVHKMGFIHR  125 (382)
T ss_pred             HHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            445677788888888888899999999999999999999999888754 3567899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      ||||+||+++.+|.++|
T Consensus       126 DlKp~NILl~~~g~~kL  142 (382)
T cd05625         126 DIKPDNILIDRDGHIKL  142 (382)
T ss_pred             CCCHHHEEECCCCCEEE
Confidence            99999999999888764


No 34 
>KOG0594|consensus
Probab=99.82  E-value=1.3e-19  Score=122.23  Aligned_cols=95  Identities=34%  Similarity=0.550  Sum_probs=78.9

Q ss_pred             hHHHHHHHhhCCCCC-ccccceeeeeCC------EEEEEEeccCCCCHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHH
Q psy15406         39 GKLWIDILSDCKHEN-IVQLYEAFFTNG------KLWMLIEYCDGGAVDSIMLELE---KPLTEQQIRYICHYMCKALQF  108 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~-i~~~~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~  108 (134)
                      +.+|+.+++.++|+| |+.+++.+.+..      .+++++|+... ++..++....   ...+...++.++.|++.|+.|
T Consensus        57 aiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~  135 (323)
T KOG0594|consen   57 AIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF  135 (323)
T ss_pred             hhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence            355666666666666 666888888766      89999999966 7888876654   357778999999999999999


Q ss_pred             HHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        109 LHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       109 lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +|+++|+|||+||+|++++.+|.+||
T Consensus       136 ~H~~~IlHRDLKPQNlLi~~~G~lKl  161 (323)
T KOG0594|consen  136 LHSHGILHRDLKPQNLLISSSGVLKL  161 (323)
T ss_pred             HHhCCeecccCCcceEEECCCCcEee
Confidence            99999999999999999999999875


No 35 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.82  E-value=6.3e-20  Score=126.64  Aligned_cols=95  Identities=25%  Similarity=0.421  Sum_probs=83.9

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|||++++++.+..+...|++|||+++++|...+.. ...+++..+..++.|++.|+.|+|+.|++|+|
T Consensus        65 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d  143 (329)
T PTZ00263         65 VAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRD  143 (329)
T ss_pred             HHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            45567777777888888899999999999999999999999888755 45688888999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.+|.++|
T Consensus       144 lkp~NIll~~~~~~kl  159 (329)
T PTZ00263        144 LKPENLLLDNKGHVKV  159 (329)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999999888764


No 36 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.82  E-value=6.2e-20  Score=128.08  Aligned_cols=96  Identities=29%  Similarity=0.532  Sum_probs=85.2

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+.+++.++|+|++++++.+.++...|++|||+++|+|.+++.. ...+++..+..++.|++.|+.|+|+.|++||
T Consensus        47 ~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~  125 (364)
T cd05599          47 HVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK-KDTFTEEETRFYIAETILAIDSIHKLGYIHR  125 (364)
T ss_pred             HHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence            345577788888888888899999999999999999999999988755 4568999999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      ||||+||+++.+|.+++
T Consensus       126 Dlkp~NIl~~~~~~~kl  142 (364)
T cd05599         126 DIKPDNLLLDAKGHIKL  142 (364)
T ss_pred             cCCHHHeEECCCCCEEE
Confidence            99999999999888764


No 37 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.82  E-value=7.6e-20  Score=126.22  Aligned_cols=94  Identities=27%  Similarity=0.484  Sum_probs=81.6

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|||++++.+.+..+...|++|||+++|++...+.. ...+++..+..++.|++.|+.|+|+.|++||||
T Consensus        43 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDi  121 (328)
T cd05593          43 LTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDL  121 (328)
T ss_pred             HHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccc
Confidence            3456666777777777799999999999999999999999877654 457889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       122 kp~NIll~~~~~~kL  136 (328)
T cd05593         122 KLENLMLDKDGHIKI  136 (328)
T ss_pred             CHHHeEECCCCcEEE
Confidence            999999998888764


No 38 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.82  E-value=8.1e-20  Score=125.21  Aligned_cols=95  Identities=27%  Similarity=0.379  Sum_probs=82.7

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|||++++++.+..+...|++|||+++|+|...+.. ...+++.....++.|++.|+.|+|+.|++|||
T Consensus        40 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrD  118 (312)
T cd05585          40 TLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNVIYRD  118 (312)
T ss_pred             HHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence            34566677777777777799999999999999999999999888754 45788999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       119 lkp~Nili~~~~~~kl  134 (312)
T cd05585         119 LKPENILLDYQGHIAL  134 (312)
T ss_pred             CCHHHeEECCCCcEEE
Confidence            9999999998887764


No 39 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.82  E-value=7.3e-20  Score=127.84  Aligned_cols=96  Identities=27%  Similarity=0.480  Sum_probs=85.4

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+.++..++|+|++++++.+.++...|++|||+++|+|.+++.. ...+++..+..++.|++.|+.|+|+.|++||
T Consensus        47 ~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~givHr  125 (363)
T cd05628          47 HIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGFIHR  125 (363)
T ss_pred             HHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEec
Confidence            345567778888888888899999999999999999999999988765 4678999999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      ||||+||+++.+|.++|
T Consensus       126 DlKp~NILi~~~~~vkL  142 (363)
T cd05628         126 DIKPDNLLLDSKGHVKL  142 (363)
T ss_pred             CCCHHHeEECCCCCEEE
Confidence            99999999999888764


No 40 
>KOG0663|consensus
Probab=99.82  E-value=3e-20  Score=125.09  Aligned_cols=93  Identities=29%  Similarity=0.568  Sum_probs=78.0

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      +||.++..++||||+.+.....+.  +.+|+|||||+. +|.+++.....++....+.+++.|++.|+.|+|.+.|+|||
T Consensus       124 REIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRD  202 (419)
T KOG0663|consen  124 REINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRD  202 (419)
T ss_pred             HHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecc
Confidence            455555555555555577777653  569999999987 78888877777899999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+|+++...|.+||
T Consensus       203 LK~SNLLm~~~G~lKi  218 (419)
T KOG0663|consen  203 LKTSNLLLSHKGILKI  218 (419)
T ss_pred             cchhheeeccCCcEEe
Confidence            9999999999998875


No 41 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.82  E-value=1.2e-19  Score=130.92  Aligned_cols=95  Identities=28%  Similarity=0.560  Sum_probs=82.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ..|+.+++.++||||+++++.+..++..|++|||+++|+|...+...   ...+++..+..++.|++.++.|+|+.+++|
T Consensus       113 ~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH  192 (478)
T PTZ00267        113 RSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMH  192 (478)
T ss_pred             HHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence            45677777777888888999999999999999999999998766432   345788899999999999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      |||||+||+++.++.++|
T Consensus       193 rDlkp~NIll~~~~~~kL  210 (478)
T PTZ00267        193 RDLKSANIFLMPTGIIKL  210 (478)
T ss_pred             CCcCHHhEEECCCCcEEE
Confidence            999999999999888764


No 42 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.82  E-value=1.8e-19  Score=124.03  Aligned_cols=95  Identities=38%  Similarity=0.510  Sum_probs=82.9

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++||||+++++.+..++..|++|||++++++...+.. ...+.+..+..++.|++.|+.|+|+.|++|||
T Consensus        47 ~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  125 (323)
T cd05584          47 TKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGIIYRD  125 (323)
T ss_pred             HHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            34567777777788888899999999999999999999999887754 45678888889999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.+|.++|
T Consensus       126 lkp~Nil~~~~~~~kl  141 (323)
T cd05584         126 LKPENILLDAQGHVKL  141 (323)
T ss_pred             CCHHHeEECCCCCEEE
Confidence            9999999999888764


No 43 
>KOG0589|consensus
Probab=99.82  E-value=4e-20  Score=129.22  Aligned_cols=98  Identities=35%  Similarity=0.585  Sum_probs=86.4

Q ss_pred             hchHHHHHHHhhCCCCCccccceeeeeCCE-EEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         37 TNGKLWIDILSDCKHENIVQLYEAFFTNGK-LWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        37 ~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~-~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      ..+.+|+.++++++||||+.+.+.|..++. ++|+|+||+||++.+.+.... ..+++..+..|+.|++.++.|+|++.|
T Consensus        48 ~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~i  127 (426)
T KOG0589|consen   48 RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRV  127 (426)
T ss_pred             HHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhh
Confidence            356677777888888888889999998887 999999999999999887654 568999999999999999999999999


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +|||+|+.||++..++.+++
T Consensus       128 LHRDlK~~Nifltk~~~VkL  147 (426)
T KOG0589|consen  128 LHRDLKCANIFLTKDKKVKL  147 (426)
T ss_pred             hcccchhhhhhccccCceee
Confidence            99999999999998887764


No 44 
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.81  E-value=2.4e-19  Score=119.13  Aligned_cols=95  Identities=23%  Similarity=0.364  Sum_probs=80.5

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+..+...+++|||++++++.+++......+++..+..++.|++.++.|+|+.|++|+|+
T Consensus        41 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl  120 (252)
T cd05084          41 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDL  120 (252)
T ss_pred             HHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence            44555556666666666999998889999999999999999887654456789999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       121 ~p~nil~~~~~~~kl  135 (252)
T cd05084         121 AARNCLVTEKNVLKI  135 (252)
T ss_pred             chheEEEcCCCcEEE
Confidence            999999998887764


No 45 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.81  E-value=1.2e-19  Score=127.09  Aligned_cols=93  Identities=31%  Similarity=0.457  Sum_probs=83.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|||++++++.+..+...|++|||+++|+|..++..  ..+++..+..++.|++.|+.|+|+.|++||||
T Consensus        91 ~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDL  168 (370)
T cd05621          91 WEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV  168 (370)
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            4567778888888888899999999999999999999999988754  46788999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.+||
T Consensus       169 Kp~NILl~~~~~~kL  183 (370)
T cd05621         169 KPDNMLLDKHGHLKL  183 (370)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999999888764


No 46 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.81  E-value=2.2e-19  Score=125.87  Aligned_cols=96  Identities=29%  Similarity=0.510  Sum_probs=85.1

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+++++.++|+|++++++.+..++..|++|||+++|+|.+++.. ...+++..+..++.|++.|+.|+|+.|++||
T Consensus        47 ~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivHr  125 (376)
T cd05598          47 HVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAIESVHKMGFIHR  125 (376)
T ss_pred             HHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence            345677888888888888899999999999999999999999988765 3567888999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      ||||+||+++.++.++|
T Consensus       126 Dlkp~Nill~~~~~ikL  142 (376)
T cd05598         126 DIKPDNILIDRDGHIKL  142 (376)
T ss_pred             CCCHHHEEECCCCCEEE
Confidence            99999999998887764


No 47 
>KOG0588|consensus
Probab=99.81  E-value=7.1e-20  Score=132.07  Aligned_cols=95  Identities=25%  Similarity=0.508  Sum_probs=85.5

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      -.+||-||+-+.|||+..+++.|..+..+|++.||+++|.|.+++.. .+++++..+..+++|++.|+.|+|..+|+|||
T Consensus        59 IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~-kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRD  137 (786)
T KOG0588|consen   59 IEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVR-KGPLPEREAAHFFRQILDGVSYCHAFNICHRD  137 (786)
T ss_pred             hhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHhhhcceecc
Confidence            45667777777777777799999999999999999999999998865 47899999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+|++++..+++||
T Consensus       138 LKpENlLLd~~~nIKI  153 (786)
T KOG0588|consen  138 LKPENLLLDVKNNIKI  153 (786)
T ss_pred             CCchhhhhhcccCEee
Confidence            9999999999888876


No 48 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.81  E-value=1.9e-19  Score=123.69  Aligned_cols=95  Identities=36%  Similarity=0.568  Sum_probs=84.7

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.++++++||||+++++.+...+..|++|||++++++...+.. ...+++..+..++.|++.|+.|+|+.|++|+|
T Consensus        45 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  123 (318)
T cd05582          45 TKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGIIYRD  123 (318)
T ss_pred             HHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            35577888888888888899999999999999999999999888754 45689999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       124 lkp~Nil~~~~~~~kL  139 (318)
T cd05582         124 LKPENILLDEEGHIKL  139 (318)
T ss_pred             CCHHHeEECCCCcEEE
Confidence            9999999998887764


No 49 
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.81  E-value=3.1e-19  Score=120.30  Aligned_cols=92  Identities=16%  Similarity=0.225  Sum_probs=81.2

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...+..+++.++|+|++++++.+..+...+++|||+++|++..++......+++.....++.|++.|+.|+|+.|++|+|
T Consensus        63 ~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~d  142 (274)
T cd05076          63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGN  142 (274)
T ss_pred             HHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence            34567788888999999999999999999999999999999888765456688899999999999999999999999999


Q ss_pred             CCCCCeEEecCC
Q psy15406        119 LKAGNVLLTMSG  130 (134)
Q Consensus       119 ik~~nill~~~~  130 (134)
                      +||+||+++..+
T Consensus       143 lkp~Nill~~~~  154 (274)
T cd05076         143 VCAKNILLARLG  154 (274)
T ss_pred             CCcccEEEeccC
Confidence            999999997543


No 50 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.81  E-value=3.3e-19  Score=122.86  Aligned_cols=94  Identities=28%  Similarity=0.484  Sum_probs=82.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~d  118 (134)
                      ..|+.+++.++|+|++.+.+.+...+..|++|||+++|++...+.. ...+++..+..++.|++.|+.|+|+ .|++|||
T Consensus        43 ~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrD  121 (325)
T cd05594          43 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD  121 (325)
T ss_pred             HHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence            4466777777888888899999999999999999999999877644 4578899999999999999999997 7999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.+|.++|
T Consensus       122 ikp~NIll~~~~~~kL  137 (325)
T cd05594         122 LKLENLMLDKDGHIKI  137 (325)
T ss_pred             CCCCeEEECCCCCEEE
Confidence            9999999999888764


No 51 
>KOG0579|consensus
Probab=99.81  E-value=1.4e-19  Score=130.86  Aligned_cols=107  Identities=52%  Similarity=0.990  Sum_probs=94.9

Q ss_pred             CcccchhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHH
Q psy15406          2 CALEGEEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDS   81 (134)
Q Consensus         2 ~~~~~~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~   81 (134)
                      +..++.++.++|+-||++|..++||+|++++++|                          ..++.+|+..|||+||..+.
T Consensus        65 IetkseEELEDylVEIeILa~CdHP~ivkLl~ay--------------------------y~enkLwiliEFC~GGAVDa  118 (1187)
T KOG0579|consen   65 IETKSEEELEDYLVEIEILAECDHPVIVKLLSAY--------------------------YFENKLWILIEFCGGGAVDA  118 (1187)
T ss_pred             hcccchhHHhhhhhhhhhhhcCCChHHHHHHHHH--------------------------hccCceEEEEeecCCchHhH
Confidence            3456677888999999999999999999876664                          34577999999999999999


Q ss_pred             HHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         82 IMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+...++.+.+.++..+++|++.++.|+|++.|+|||+|++||++.-+|.+++
T Consensus       119 imlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirL  171 (1187)
T KOG0579|consen  119 IMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRL  171 (1187)
T ss_pred             HHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEee
Confidence            99998899999999999999999999999999999999999999998887764


No 52 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.81  E-value=2.9e-19  Score=121.88  Aligned_cols=95  Identities=21%  Similarity=0.372  Sum_probs=79.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC------------------CCCCHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE------------------KPLTEQQIRYICHY  101 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~------------------~~~~~~~~~~~~~~  101 (134)
                      ..|+.+++.++|||++++++.+......+++|||++++++.+++....                  ..+++.....++.|
T Consensus        67 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  146 (304)
T cd05096          67 LKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQ  146 (304)
T ss_pred             HHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHH
Confidence            455666666677777779999999899999999999999988775421                  12466778889999


Q ss_pred             HHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        102 MCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       102 i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++.|+.|+|+.|++|+|+||+||+++.++.++|
T Consensus       147 i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl  179 (304)
T cd05096         147 IASGMKYLSSLNFVHRDLATRNCLVGENLTIKI  179 (304)
T ss_pred             HHHHHHHHHHCCccccCcchhheEEcCCccEEE
Confidence            999999999999999999999999998887764


No 53 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.81  E-value=2e-19  Score=125.97  Aligned_cols=93  Identities=35%  Similarity=0.480  Sum_probs=81.7

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|||++++++.+.++...|++|||+++|+|..++..  ..+++..+..++.|++.|+.|+|+.|++||||
T Consensus        91 ~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDL  168 (370)
T cd05596          91 WEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDV  168 (370)
T ss_pred             HHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            3466677777777777799999999999999999999999988754  46788889999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.+|.++|
T Consensus       169 kp~NILl~~~~~~kL  183 (370)
T cd05596         169 KPDNMLLDKSGHLKL  183 (370)
T ss_pred             CHHHEEEcCCCCEEE
Confidence            999999999888764


No 54 
>KOG0608|consensus
Probab=99.81  E-value=4.2e-19  Score=128.19  Aligned_cols=117  Identities=24%  Similarity=0.451  Sum_probs=102.2

Q ss_pred             HHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHH
Q psy15406         15 IEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQ   94 (134)
Q Consensus        15 ~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~   94 (134)
                      +.+..|+.|+.-.|..  .-.....+-|-+||...+.+-+|++|-.|.+++.+|+||+|++||++.+++... +.|.+..
T Consensus       654 ~~lYAmKTLrKaDVl~--rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrm-gIFeE~L  730 (1034)
T KOG0608|consen  654 RALYAMKTLRKADVLM--RNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFEEDL  730 (1034)
T ss_pred             hhHHHHhhhHHHHHHh--hhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHh-ccCHHHH
Confidence            5566777777666554  233445677899999999999999999999999999999999999999887653 6789999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         95 IRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        95 ~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +++++..+..++.+.|..|.+||||||+|||+|.+|.+|+
T Consensus       731 ARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKL  770 (1034)
T KOG0608|consen  731 ARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKL  770 (1034)
T ss_pred             HHHHHHHHHHHHHHHHhccceecccCccceEEccCCceee
Confidence            9999999999999999999999999999999999999885


No 55 
>KOG0597|consensus
Probab=99.81  E-value=2.2e-19  Score=128.04  Aligned_cols=98  Identities=40%  Similarity=0.688  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK   88 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~   88 (134)
                      +.+...+|+++++.++||||+.                          +++.|.+...+|+|+|||.+ +|..++.. +.
T Consensus        44 ~l~~l~~ev~i~r~lkHpniv~--------------------------m~esfEt~~~~~vVte~a~g-~L~~il~~-d~   95 (808)
T KOG0597|consen   44 ELKNLRQEVRILRSLKHPNIVE--------------------------MLESFETSAHLWVVTEYAVG-DLFTILEQ-DG   95 (808)
T ss_pred             HHHHHHHHHHHHHhcCCcchhh--------------------------HHHhhcccceEEEEehhhhh-hHHHHHHh-cc
Confidence            4455666666666666666666                          77778888999999999987 89888755 67


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         89 PLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        89 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+++..+..+..+++.|+.|+|+++|+|||+||.||+++..|.+|+
T Consensus        96 ~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~Kl  141 (808)
T KOG0597|consen   96 KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKL  141 (808)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceee
Confidence            8999999999999999999999999999999999999999998874


No 56 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.81  E-value=2.9e-19  Score=123.43  Aligned_cols=95  Identities=35%  Similarity=0.477  Sum_probs=84.1

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|++++..++|+|++++++.+..+...|++|||+++++|..++.. ...+++..+..++.|++.++.|+|+.|++|+|
T Consensus        48 ~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d  126 (333)
T cd05600          48 VLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHELGYIHRD  126 (333)
T ss_pred             HHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            44567777778888888899999999999999999999999988754 45688999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+||+++.++.++|
T Consensus       127 lkp~Nil~~~~~~~kL  142 (333)
T cd05600         127 LKPENFLIDASGHIKL  142 (333)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999999888764


No 57 
>KOG0658|consensus
Probab=99.81  E-value=7.8e-21  Score=128.67  Aligned_cols=93  Identities=25%  Similarity=0.423  Sum_probs=69.1

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC-----CEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN-----GKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFLHTH  112 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~  112 (134)
                      +|+.+|+.++||||+++.-+|...     -.+.+||||++. +|...+..   .+..++...++.+.+|+..|+.|+|..
T Consensus        66 rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~  144 (364)
T KOG0658|consen   66 RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH  144 (364)
T ss_pred             HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence            344444444444444465555532     235699999988 66665542   246788888999999999999999999


Q ss_pred             CCccCCCCCCCeEEecC-CeeeC
Q psy15406        113 RVIHRDLKAGNVLLTMS-GGVKL  134 (134)
Q Consensus       113 ~i~h~dik~~nill~~~-~~~~i  134 (134)
                      ||+||||||.|+++|.+ |.+||
T Consensus       145 ~IcHRDIKPqNlLvD~~tg~LKi  167 (364)
T KOG0658|consen  145 GICHRDIKPQNLLVDPDTGVLKI  167 (364)
T ss_pred             CcccCCCChheEEEcCCCCeEEe
Confidence            99999999999999866 87775


No 58 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.81  E-value=4.2e-19  Score=122.47  Aligned_cols=96  Identities=30%  Similarity=0.411  Sum_probs=84.8

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|+|++.+++.+......|++|||+++|+|..++......+++..+..++.|++.++.|+|+.|++|||
T Consensus        48 ~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~D  127 (330)
T cd05601          48 FEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRD  127 (330)
T ss_pred             HHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccc
Confidence            34566777777788888899999989999999999999999998876546789999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.+|.++|
T Consensus       128 lkp~NIll~~~~~~kL  143 (330)
T cd05601         128 IKPENVLIDRTGHIKL  143 (330)
T ss_pred             CchHheEECCCCCEEe
Confidence            9999999999988875


No 59 
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.80  E-value=2.7e-19  Score=123.65  Aligned_cols=96  Identities=28%  Similarity=0.448  Sum_probs=85.0

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.++..++|+|++.+++.+..+...|++|||+++|+|..++......+++..+..++.|++.|+.|+|+.|++|||
T Consensus        48 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  127 (331)
T cd05597          48 FREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRD  127 (331)
T ss_pred             HHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECC
Confidence            34567777778888888899999999999999999999999988865456788999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+||+++.++.++|
T Consensus       128 lkp~Nill~~~~~~kl  143 (331)
T cd05597         128 IKPDNVLLDKNGHIRL  143 (331)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999998887764


No 60 
>KOG0580|consensus
Probab=99.80  E-value=3.7e-20  Score=119.62  Aligned_cols=95  Identities=33%  Similarity=0.535  Sum_probs=79.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      .+|++|.+.++||||..+|+.|-++...|+++||.+.|++...+... ...+++..+..++.|++.|+.|+|..+++|||
T Consensus        70 rREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRd  149 (281)
T KOG0580|consen   70 RREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRD  149 (281)
T ss_pred             hheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCC
Confidence            34555555555555555777888889999999999999998877642 35688999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+|++++..|..|+
T Consensus       150 iKpenlLlg~~~~lki  165 (281)
T KOG0580|consen  150 IKPENLLLGSAGELKI  165 (281)
T ss_pred             CCHHHhccCCCCCeec
Confidence            9999999999988775


No 61 
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.80  E-value=4.6e-19  Score=119.51  Aligned_cols=94  Identities=71%  Similarity=1.213  Sum_probs=80.8

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+..+...|++|||++++++..++......+++..+..++.|++.++.|+|+.|++|+|++
T Consensus        51 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~  130 (280)
T cd06611          51 VEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLK  130 (280)
T ss_pred             HHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            34555555666666669999999999999999999999998887655678999999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+|++++.++.+++
T Consensus       131 p~nili~~~~~~~l  144 (280)
T cd06611         131 AGNILLTLDGDVKL  144 (280)
T ss_pred             hhhEEECCCCCEEE
Confidence            99999998887664


No 62 
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.80  E-value=6.8e-19  Score=117.27  Aligned_cols=94  Identities=24%  Similarity=0.501  Sum_probs=79.8

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|||++++++++..+...+++|||+++|++.+++......+++.....++.+++.++.|+|++|++|+|++
T Consensus        48 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  127 (256)
T cd05114          48 EEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLA  127 (256)
T ss_pred             HHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccC
Confidence            45555666666666669999998899999999999999998876544567888999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+|++++.++.+++
T Consensus       128 p~ni~i~~~~~~kl  141 (256)
T cd05114         128 ARNCLVSSTGVVKV  141 (256)
T ss_pred             cceEEEcCCCeEEE
Confidence            99999998887664


No 63 
>KOG0584|consensus
Probab=99.80  E-value=8.4e-19  Score=125.60  Aligned_cols=123  Identities=22%  Similarity=0.420  Sum_probs=103.7

Q ss_pred             ccchhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCE--EEEEEeccCCCCHHH
Q psy15406          4 LEGEEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGK--LWMLIEYCDGGAVDS   81 (134)
Q Consensus         4 ~~~~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~l~~   81 (134)
                      .+...+.+.++.|+++-..++.|.=..       +...|+++|+.++|+||+++|++|.+...  ..+++|++..|+|..
T Consensus        60 ~De~~giEVAWnqvk~~d~~q~~~~le-------R~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~  132 (632)
T KOG0584|consen   60 FDEEEGIEVAWNQVKIRDVTQSPEELE-------RLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLRE  132 (632)
T ss_pred             cccccchhhHHHHHhHHHhhcChHHHH-------HHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHH
Confidence            445677888888888888877765332       34568999999999999999999997544  889999999999999


Q ss_pred             HHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCCeEEecC-CeeeC
Q psy15406         82 IMLELEKPLTEQQIRYICHYMCKALQFLHTHR--VIHRDLKAGNVLLTMS-GGVKL  134 (134)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dik~~nill~~~-~~~~i  134 (134)
                      +... .+......+..|++||+.|+.|+|++.  |+|||+|.+||+++.+ |.+||
T Consensus       133 Y~kk-~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKI  187 (632)
T KOG0584|consen  133 YRKK-HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKI  187 (632)
T ss_pred             HHHH-hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceee
Confidence            8755 577888999999999999999999885  9999999999999766 88886


No 64 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.80  E-value=4e-19  Score=120.08  Aligned_cols=96  Identities=28%  Similarity=0.406  Sum_probs=82.1

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      ...|+.+++.++|+|++.+.+.+..+...|++|||+++|++...+..   ....+++..+..++.|++.|+.|+|+.|++
T Consensus        40 ~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~  119 (280)
T cd05608          40 AMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRII  119 (280)
T ss_pred             HHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            34567777777888888899999989999999999999999876543   234688999999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      |+||||+||+++.++.++|
T Consensus       120 H~dlkp~Nili~~~~~~~l  138 (280)
T cd05608         120 YRDLKPENVLLDNDGNVRI  138 (280)
T ss_pred             cCCCCHHHEEECCCCCEEE
Confidence            9999999999998877654


No 65 
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.80  E-value=6.4e-19  Score=118.12  Aligned_cols=95  Identities=21%  Similarity=0.334  Sum_probs=81.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.++++++|||++++++.+..+...|++|||++++++.+++......++......++.|++.++.|+|+.+++|+|+
T Consensus        53 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dl  132 (267)
T cd05066          53 LSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL  132 (267)
T ss_pred             HHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhh
Confidence            44566666667777777999999889999999999999999988665556788899999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+|++++.++.+++
T Consensus       133 kp~nili~~~~~~~l  147 (267)
T cd05066         133 AARNILVNSNLVCKV  147 (267)
T ss_pred             chhcEEECCCCeEEe
Confidence            999999998887654


No 66 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.80  E-value=6.7e-19  Score=122.84  Aligned_cols=96  Identities=26%  Similarity=0.492  Sum_probs=85.8

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+.++..++|++++++++.+.++...|++|||+++|+|.+++.. ...+++..+..++.|++.++.|+|+.|++||
T Consensus        47 ~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~~givHr  125 (360)
T cd05627          47 HIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQLGFIHR  125 (360)
T ss_pred             HHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence            345577888888889999999999999999999999999999988754 4568899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      ||||+||+++.+|.++|
T Consensus       126 DLkp~NIli~~~~~vkL  142 (360)
T cd05627         126 DIKPDNLLLDAKGHVKL  142 (360)
T ss_pred             CCCHHHEEECCCCCEEE
Confidence            99999999998888764


No 67 
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.80  E-value=4.7e-19  Score=118.81  Aligned_cols=94  Identities=19%  Similarity=0.290  Sum_probs=77.6

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK----PLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      .|+.+++.++|+|++++++.+......|++|||+++|++.+++.....    ..++.....++.|++.|+.|+|+.+++|
T Consensus        44 ~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH  123 (269)
T cd05042          44 QEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIH  123 (269)
T ss_pred             HHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEec
Confidence            345555556666666699999988999999999999999988765321    2356777889999999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      ||+||+||+++.++.+++
T Consensus       124 ~dlkp~Nill~~~~~~kl  141 (269)
T cd05042         124 SDLALRNCQLTADLSVKI  141 (269)
T ss_pred             ccccHhheEecCCCcEEE
Confidence            999999999999888764


No 68 
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.80  E-value=4.4e-19  Score=124.34  Aligned_cols=93  Identities=33%  Similarity=0.468  Sum_probs=82.7

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|||++++++.+..+...|++|||+++|+|..++..  ..+++..+..++.|++.|+.|+|++|++||||
T Consensus        91 ~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDL  168 (371)
T cd05622          91 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDV  168 (371)
T ss_pred             HHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence            4567777778888888899999999999999999999999988754  45788889999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.+|.++|
T Consensus       169 kp~NIll~~~~~ikL  183 (371)
T cd05622         169 KPDNMLLDKSGHLKL  183 (371)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998888764


No 69 
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.80  E-value=1.7e-18  Score=119.36  Aligned_cols=95  Identities=24%  Similarity=0.445  Sum_probs=82.9

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...|+.+++.++||||+++++.+..+...|++|||+++|++.+++... ...+++..+..++.|++.|+.|+|+++++|+
T Consensus        46 ~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~  125 (327)
T cd08227          46 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHR  125 (327)
T ss_pred             HHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence            345677888888888888999999999999999999999999887543 2457889999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeee
Q psy15406        118 DLKAGNVLLTMSGGVK  133 (134)
Q Consensus       118 dik~~nill~~~~~~~  133 (134)
                      |+||+||+++.++.++
T Consensus       126 dlkp~Nil~~~~~~~~  141 (327)
T cd08227         126 SVKASHILISVDGKVY  141 (327)
T ss_pred             CCChhhEEEecCCcEE
Confidence            9999999998877664


No 70 
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.80  E-value=1.4e-18  Score=117.29  Aligned_cols=94  Identities=57%  Similarity=1.087  Sum_probs=79.6

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+..+...|+++||++++++...+......+++.....++.|++.++.|+|+.|++|+|++
T Consensus        51 ~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlk  130 (282)
T cd06643          51 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLK  130 (282)
T ss_pred             HHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            34555555566666669999998999999999999999988766545678899999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.+++
T Consensus       131 p~nili~~~~~~kl  144 (282)
T cd06643         131 AGNILFTLDGDIKL  144 (282)
T ss_pred             cccEEEccCCCEEE
Confidence            99999998887764


No 71 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.79  E-value=5.2e-19  Score=120.66  Aligned_cols=94  Identities=27%  Similarity=0.423  Sum_probs=79.7

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .+|+.+++.++|||++++++.+..+...+++|||+++ ++...+......+++..+..++.|++.|+.|+|+.|++|||+
T Consensus        51 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dl  129 (303)
T cd07869          51 IREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDL  129 (303)
T ss_pred             HHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            4566677777777777799999999999999999965 666666554456888899999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       130 kp~Nill~~~~~~kl  144 (303)
T cd07869         130 KPQNLLISDTGELKL  144 (303)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998888764


No 72 
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.79  E-value=1.5e-18  Score=115.85  Aligned_cols=93  Identities=20%  Similarity=0.228  Sum_probs=81.6

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...+..+++.++|||++++++.+..+...+++|||+++|++..++......+++.....++.|++.++.|+|+.|++|||
T Consensus        46 ~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~d  125 (258)
T cd05078          46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGN  125 (258)
T ss_pred             HHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            34567778888888888899999998899999999999999988866545678889999999999999999999999999


Q ss_pred             CCCCCeEEecCCe
Q psy15406        119 LKAGNVLLTMSGG  131 (134)
Q Consensus       119 ik~~nill~~~~~  131 (134)
                      +||+||+++.++.
T Consensus       126 lkp~nili~~~~~  138 (258)
T cd05078         126 VCAKNVLLIREED  138 (258)
T ss_pred             CccceEEEecccc
Confidence            9999999987654


No 73 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.79  E-value=7.7e-19  Score=121.25  Aligned_cols=94  Identities=33%  Similarity=0.532  Sum_probs=82.0

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|..++..+ +|||++++++++......|++|||+++|+|...+.. ...+++..+..++.|++.|+.|+|++|++|||
T Consensus        43 ~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d  121 (329)
T cd05588          43 QTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHERGIIYRD  121 (329)
T ss_pred             HHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            4456666666 588888899999999999999999999999877654 46789999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       122 lkp~Nili~~~~~~kL  137 (329)
T cd05588         122 LKLDNVLLDAEGHIKL  137 (329)
T ss_pred             CCHHHeEECCCCCEEE
Confidence            9999999998887764


No 74 
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.79  E-value=1.6e-18  Score=116.05  Aligned_cols=94  Identities=22%  Similarity=0.360  Sum_probs=80.6

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+......+++||+++++++.+++......+++.....++.+++.++.|+|+++++|+|++
T Consensus        54 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~  133 (266)
T cd05033          54 TEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLA  133 (266)
T ss_pred             HHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            35555666666666669998888889999999999999999886655578899999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.+++
T Consensus       134 p~nili~~~~~~~l  147 (266)
T cd05033         134 ARNILVNSNLVCKV  147 (266)
T ss_pred             cceEEEcCCCCEEE
Confidence            99999998887654


No 75 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.79  E-value=6.7e-19  Score=122.16  Aligned_cols=94  Identities=31%  Similarity=0.545  Sum_probs=79.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.++..++|+|++++++.+..+...|++|||+++++|..++... ..+++..+..++.|++.|+.|+|+.|++|+||
T Consensus        49 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dl  127 (350)
T cd05573          49 RAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDI  127 (350)
T ss_pred             HHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            34455555556666666777888889999999999999999887653 67899999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       128 kp~NIll~~~~~~kL  142 (350)
T cd05573         128 KPDNILIDADGHIKL  142 (350)
T ss_pred             CHHHeEECCCCCEEe
Confidence            999999999888764


No 76 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.79  E-value=1e-18  Score=118.49  Aligned_cols=94  Identities=26%  Similarity=0.457  Sum_probs=80.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+..+...+++||++++ ++..++......++...+..++.|++.|+.|+|+.|++|||+
T Consensus        51 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dl  129 (288)
T cd07871          51 IREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDL  129 (288)
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            4567777777777888899999999999999999975 787776654455788899999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       130 kp~Nil~~~~~~~kl  144 (288)
T cd07871         130 KPQNLLINEKGELKL  144 (288)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887764


No 77 
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.79  E-value=7.5e-19  Score=121.40  Aligned_cols=95  Identities=28%  Similarity=0.479  Sum_probs=84.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.++..++|++++.+++.+..+...|++|||+++|+|..++......+++..+..++.|++.++.|+|+.|++||||
T Consensus        49 ~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDl  128 (331)
T cd05624          49 REERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDI  128 (331)
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            45667777788888888999999999999999999999999988765567889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       129 kp~Nill~~~~~~kl  143 (331)
T cd05624         129 KPDNVLLDMNGHIRL  143 (331)
T ss_pred             chHHEEEcCCCCEEE
Confidence            999999998887764


No 78 
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.79  E-value=1.2e-18  Score=116.86  Aligned_cols=95  Identities=22%  Similarity=0.337  Sum_probs=80.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|||++++.+.+..+...+++|||++++++.+++......++......++.|++.++.|+|+.|++|+|+
T Consensus        53 ~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl  132 (269)
T cd05065          53 LSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDL  132 (269)
T ss_pred             HHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence            34556666666666667999998889999999999999999887665556788999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+|++++.++.+++
T Consensus       133 ~p~nili~~~~~~kl  147 (269)
T cd05065         133 AARNILVNSNLVCKV  147 (269)
T ss_pred             ChheEEEcCCCcEEE
Confidence            999999988877653


No 79 
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.79  E-value=1e-18  Score=116.63  Aligned_cols=95  Identities=27%  Similarity=0.494  Sum_probs=82.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|||++++++++......+++|||++++++.+++......+++.....++.|++.|+.|+|+.|++|+|+
T Consensus        47 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  126 (256)
T cd05113          47 IEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDL  126 (256)
T ss_pred             HHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            45667777777777777999998888899999999999999887654456889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       127 ~p~nili~~~~~~kl  141 (256)
T cd05113         127 AARNCLVDDQGCVKV  141 (256)
T ss_pred             CcceEEEcCCCCEEE
Confidence            999999998887764


No 80 
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.79  E-value=2e-18  Score=115.94  Aligned_cols=89  Identities=21%  Similarity=0.327  Sum_probs=71.5

Q ss_pred             HhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q psy15406         46 LSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAG  122 (134)
Q Consensus        46 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~  122 (134)
                      ++.++|||++++++.+......|++|||+++|+|.+++....   ...+...+..++.|++.|+.|+|+.+++|+|+||+
T Consensus        49 ~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~  128 (268)
T cd05086          49 YRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALR  128 (268)
T ss_pred             HhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccc
Confidence            333344444448888888888999999999999998876431   23556677888999999999999999999999999


Q ss_pred             CeEEecCCeeeC
Q psy15406        123 NVLLTMSGGVKL  134 (134)
Q Consensus       123 nill~~~~~~~i  134 (134)
                      ||+++.++.+++
T Consensus       129 nil~~~~~~~~l  140 (268)
T cd05086         129 NCFLTSDLTVKV  140 (268)
T ss_pred             eEEEcCCccEEe
Confidence            999998887764


No 81 
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.79  E-value=1.2e-18  Score=120.48  Aligned_cols=96  Identities=29%  Similarity=0.485  Sum_probs=77.1

Q ss_pred             hHHHHHHHhhC-CCCCccccceeeeeC-CEEEEEEeccCCCCHHHHHHHhC-----------------------------
Q psy15406         39 GKLWIDILSDC-KHENIVQLYEAFFTN-GKLWMLIEYCDGGAVDSIMLELE-----------------------------   87 (134)
Q Consensus        39 ~~~~~~~~~~~-~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~l~~~~~~~~-----------------------------   87 (134)
                      ...|+.++..+ +||||+++++.+... +.++++|||+++|+|.+++....                             
T Consensus        57 ~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (338)
T cd05102          57 LMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRR  136 (338)
T ss_pred             HHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccc
Confidence            34566677776 677777788877653 46899999999999988775421                             


Q ss_pred             --------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         88 --------------------------------KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        88 --------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                                                      ..++......++.|++.|+.|+|+.|++||||||+||+++.++.++|
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl  215 (338)
T cd05102         137 IEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKI  215 (338)
T ss_pred             cccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEE
Confidence                                            13566777888999999999999999999999999999998887764


No 82 
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.79  E-value=2.3e-18  Score=114.67  Aligned_cols=89  Identities=19%  Similarity=0.344  Sum_probs=73.4

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+.. ...+++|||+++|++..++......++......++.|++.|+.|+|+.|++|+|+|
T Consensus        50 ~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlk  128 (259)
T cd05037          50 ETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVC  128 (259)
T ss_pred             HHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCc
Confidence            34445555555555558887777 67899999999999998876644468888999999999999999999999999999


Q ss_pred             CCCeEEecCC
Q psy15406        121 AGNVLLTMSG  130 (134)
Q Consensus       121 ~~nill~~~~  130 (134)
                      |+||+++.++
T Consensus       129 p~Nill~~~~  138 (259)
T cd05037         129 GKNILVARYG  138 (259)
T ss_pred             cceEEEecCc
Confidence            9999998776


No 83 
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.79  E-value=2.2e-18  Score=119.19  Aligned_cols=94  Identities=29%  Similarity=0.603  Sum_probs=78.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTH-RVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~d  118 (134)
                      ..|+.+++.++|+|++++++.+..++..+++|||+++++|.+++.. ...+++.....++.+++.++.|+|+. +++|+|
T Consensus        51 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~d  129 (333)
T cd06650          51 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD  129 (333)
T ss_pred             HHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence            3455555555666666699999999999999999999999988754 35678889999999999999999975 799999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+||+++.++.++|
T Consensus       130 lkp~Nili~~~~~~kL  145 (333)
T cd06650         130 VKPSNILVNSRGEIKL  145 (333)
T ss_pred             CChhhEEEcCCCCEEE
Confidence            9999999998887764


No 84 
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.79  E-value=3e-18  Score=117.27  Aligned_cols=100  Identities=26%  Similarity=0.430  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-C
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-E   87 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~   87 (134)
                      ..+.+.+|+++++.++||||++                          +++.+..+...+++|||++++++..++... .
T Consensus        42 ~~~~~~~Ei~~l~~l~h~~i~~--------------------------~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~   95 (314)
T cd08216          42 DLKLLQQEIITSRQLQHPNILP--------------------------YVTSFIVDSELYVVSPLMAYGSCEDLLKTHFP   95 (314)
T ss_pred             HHHHHHHHHHHHHhcCCcchhh--------------------------hhheeecCCeEEEEEeccCCCCHHHHHHHhcc
Confidence            3345556666666666666555                          677777788899999999999998887653 3


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         88 KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        88 ~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ..+++.....++.|++.|+.|+|+++++|+|++|+||+++.+|.+++
T Consensus        96 ~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl  142 (314)
T cd08216          96 EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVL  142 (314)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEE
Confidence            45788899999999999999999999999999999999998887654


No 85 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.78  E-value=1.6e-18  Score=119.69  Aligned_cols=95  Identities=27%  Similarity=0.467  Sum_probs=82.8

Q ss_pred             hHHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...|+.+++.++ |++++.+++.+..++..+++|||+++|++...+.. ...+++..+..++.|++.|+.|+|+.|++||
T Consensus        51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHr  129 (332)
T cd05614          51 TRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLGIVYR  129 (332)
T ss_pred             HHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEec
Confidence            445667777774 77888899999999999999999999999888754 4568899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      ||||+||+++.+|.++|
T Consensus       130 Dlkp~Nili~~~~~~kl  146 (332)
T cd05614         130 DIKLENILLDSEGHVVL  146 (332)
T ss_pred             CCCHHHeEECCCCCEEE
Confidence            99999999999888764


No 86 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.78  E-value=1.5e-18  Score=119.84  Aligned_cols=94  Identities=33%  Similarity=0.541  Sum_probs=80.9

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.++..+ +|||++++++++..+...|++|||+++|++...+.. ...+++..+..++.|++.|+.|+|++|++|||
T Consensus        43 ~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~D  121 (329)
T cd05618          43 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRD  121 (329)
T ss_pred             HHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            3445555544 678888899999999999999999999999877644 46789999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       122 ikp~Nili~~~~~~kL  137 (329)
T cd05618         122 LKLDNVLLDSEGHIKL  137 (329)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999999888764


No 87 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.78  E-value=6.9e-19  Score=119.17  Aligned_cols=95  Identities=24%  Similarity=0.387  Sum_probs=81.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|++++.+.+.+..++..+++|||+++|++...+... ...+++..+..++.|++.|+.|+|+.|++|||
T Consensus        48 ~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~d  127 (285)
T cd05631          48 LNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRD  127 (285)
T ss_pred             HHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            45677777777888888999999999999999999999998766543 23578899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       128 ikp~Nill~~~~~~kl  143 (285)
T cd05631         128 LKPENILLDDRGHIRI  143 (285)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999998887764


No 88 
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.78  E-value=1.7e-18  Score=118.23  Aligned_cols=95  Identities=26%  Similarity=0.409  Sum_probs=80.7

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------CCCCHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------KPLTEQQIRYICHYMC  103 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i~  103 (134)
                      ..|++++.++ +|+|++++++.+..++..|++|||++++++.+++....               ..++...+..++.|++
T Consensus        55 ~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~  134 (303)
T cd05088          55 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA  134 (303)
T ss_pred             HHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHH
Confidence            4466666666 67777779999999999999999999999998875421               2467888999999999


Q ss_pred             HHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        104 KALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       104 ~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .|+.|+|++|++|+|+||+|++++.++.++|
T Consensus       135 ~al~~LH~~gi~H~dlkp~Nili~~~~~~kl  165 (303)
T cd05088         135 RGMDYLSQKQFIHRDLAARNILVGENYVAKI  165 (303)
T ss_pred             HHHHHHHhCCccccccchheEEecCCCcEEe
Confidence            9999999999999999999999998887764


No 89 
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.78  E-value=2.3e-18  Score=116.87  Aligned_cols=95  Identities=59%  Similarity=1.045  Sum_probs=81.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++.+.+..++..|++|||++++++...+.+....+++..+..++.|++.++.|+|+.|++|+|+
T Consensus        57 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl  136 (292)
T cd06644          57 MVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDL  136 (292)
T ss_pred             HHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCC
Confidence            34555566666666666999999899999999999999998877655567899999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.++|
T Consensus       137 kp~Nili~~~~~~kl  151 (292)
T cd06644         137 KAGNVLLTLDGDIKL  151 (292)
T ss_pred             CcceEEEcCCCCEEE
Confidence            999999998887764


No 90 
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.78  E-value=1.4e-18  Score=119.49  Aligned_cols=89  Identities=33%  Similarity=0.535  Sum_probs=79.2

Q ss_pred             HHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCe
Q psy15406         45 ILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNV  124 (134)
Q Consensus        45 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~ni  124 (134)
                      +++.++|+|++++++.+......|++|||++++++...+.. ...+++..+..++.|++.|+.|+|+.|++||||||+||
T Consensus        49 ~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NI  127 (321)
T cd05603          49 LLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENI  127 (321)
T ss_pred             HHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHe
Confidence            56677888888899999999999999999999999877644 45688889999999999999999999999999999999


Q ss_pred             EEecCCeeeC
Q psy15406        125 LLTMSGGVKL  134 (134)
Q Consensus       125 ll~~~~~~~i  134 (134)
                      +++.+|.++|
T Consensus       128 ll~~~~~~kl  137 (321)
T cd05603         128 LLDSQGHVVL  137 (321)
T ss_pred             EECCCCCEEE
Confidence            9999888774


No 91 
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.78  E-value=1.5e-18  Score=115.86  Aligned_cols=95  Identities=21%  Similarity=0.329  Sum_probs=78.7

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.++++++|+|++++++.+. ....+++|||++++++.+++......+++..+..++.|++.++.|+|++|++|+|
T Consensus        42 ~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  120 (257)
T cd05115          42 MMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRD  120 (257)
T ss_pred             HHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecc
Confidence            344566666666677777888765 4568999999999999988765556789999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+||+++.++.+++
T Consensus       121 lkp~nil~~~~~~~kl  136 (257)
T cd05115         121 LAARNVLLVNQHYAKI  136 (257)
T ss_pred             cchheEEEcCCCcEEe
Confidence            9999999988877654


No 92 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.78  E-value=2.5e-18  Score=118.75  Aligned_cols=95  Identities=28%  Similarity=0.592  Sum_probs=80.8

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTH-RVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~  117 (134)
                      ..+|+++++.++|+|++++++.+..++..+++|||+++++|.+++.. ...+++..+..++.|++.++.|+|+. +++|+
T Consensus        50 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~  128 (331)
T cd06649          50 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQIMHR  128 (331)
T ss_pred             HHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcC
Confidence            34456666666666666799999999999999999999999988754 35688999999999999999999986 69999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |+||+||+++.++.++|
T Consensus       129 dlkp~Nil~~~~~~~kl  145 (331)
T cd06649         129 DVKPSNILVNSRGEIKL  145 (331)
T ss_pred             CCChhhEEEcCCCcEEE
Confidence            99999999999888764


No 93 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.78  E-value=1.7e-18  Score=119.16  Aligned_cols=93  Identities=34%  Similarity=0.517  Sum_probs=79.2

Q ss_pred             HHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         41 LWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        41 ~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .|..++... +|||++++++++......|++|||+++|+|...+.. ...+++..+..++.|++.|+.|+|+.|++||||
T Consensus        44 ~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~-~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dl  122 (320)
T cd05590          44 TEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEITSALMFLHDKGIIYRDL  122 (320)
T ss_pred             HHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            344444444 477777799999999999999999999999877654 467889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       123 kp~NIli~~~~~~kL  137 (320)
T cd05590         123 KLDNVLLDHEGHCKL  137 (320)
T ss_pred             CHHHeEECCCCcEEE
Confidence            999999999888764


No 94 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.78  E-value=1.7e-18  Score=119.06  Aligned_cols=94  Identities=34%  Similarity=0.486  Sum_probs=80.7

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|..++..+ +|||++.+++++..+...|++|||++++++...+.. ...+++..+..++.|++.|+.|+|+.|++|||
T Consensus        43 ~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  121 (321)
T cd05591          43 MTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRD  121 (321)
T ss_pred             HHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            3455555544 678888899999999999999999999999877654 45688899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.+|.++|
T Consensus       122 ikp~Nill~~~~~~kL  137 (321)
T cd05591         122 LKLDNILLDAEGHCKL  137 (321)
T ss_pred             CCHHHeEECCCCCEEE
Confidence            9999999999888764


No 95 
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.78  E-value=2e-18  Score=116.55  Aligned_cols=95  Identities=25%  Similarity=0.502  Sum_probs=77.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+.+++.++|+|++++.+.+..  ....++++||+++++|.+++......+++.....++.|++.|+.|+|++|++|+
T Consensus        53 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~  132 (284)
T cd05081          53 EREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHR  132 (284)
T ss_pred             HHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence            445566666666666668776643  346899999999999998876544567889999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |+||+||+++.++.++|
T Consensus       133 dlkp~nili~~~~~~~l  149 (284)
T cd05081         133 DLATRNILVESENRVKI  149 (284)
T ss_pred             cCCHhhEEECCCCeEEE
Confidence            99999999998887764


No 96 
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.78  E-value=2e-18  Score=115.61  Aligned_cols=92  Identities=22%  Similarity=0.298  Sum_probs=81.1

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...++.+++.++|||++++++.+..+...+++|||++++++..++......+++.....++.|++.|+.|+|+.+++|+|
T Consensus        51 ~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  130 (262)
T cd05077          51 FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGN  130 (262)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCC
Confidence            34567788888999999999999988889999999999999887655445688899999999999999999999999999


Q ss_pred             CCCCCeEEecCC
Q psy15406        119 LKAGNVLLTMSG  130 (134)
Q Consensus       119 ik~~nill~~~~  130 (134)
                      +||+||+++.++
T Consensus       131 lkp~Nill~~~~  142 (262)
T cd05077         131 VCTKNILLAREG  142 (262)
T ss_pred             CCcccEEEecCC
Confidence            999999997655


No 97 
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.78  E-value=1.1e-18  Score=118.18  Aligned_cols=95  Identities=23%  Similarity=0.360  Sum_probs=81.6

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++.+++.+..+...+++|||+++|++...+... ...+++..+..++.|++.|+.|+|+.|++|+|
T Consensus        48 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  127 (285)
T cd05605          48 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRD  127 (285)
T ss_pred             HHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecC
Confidence            44677777777777777999999889999999999999998776543 24588999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |+|+||+++.++.++|
T Consensus       128 lkp~Nil~~~~~~~~l  143 (285)
T cd05605         128 LKPENILLDDYGHIRI  143 (285)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999998887754


No 98 
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.78  E-value=5e-18  Score=113.20  Aligned_cols=96  Identities=42%  Similarity=0.812  Sum_probs=82.0

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|+|++++++.+.....+|++||+++++++..++......+++..+..++.|++.++.|+|+.+++|+|
T Consensus        47 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d  126 (262)
T cd06613          47 IQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRD  126 (262)
T ss_pred             HHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Confidence            34455566666666666699999999999999999999999988766446789999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       127 l~p~ni~i~~~~~~~l  142 (262)
T cd06613         127 IKGANILLTEDGDVKL  142 (262)
T ss_pred             CChhhEEECCCCCEEE
Confidence            9999999998887764


No 99 
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.78  E-value=3.9e-18  Score=114.10  Aligned_cols=92  Identities=24%  Similarity=0.411  Sum_probs=74.6

Q ss_pred             HHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         43 IDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      +.+++.++|+|++++++.+..++..+++|||++++++.+.+.... ..+++.....++.|++.++.|+|++|++|+|+||
T Consensus        53 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp  132 (263)
T cd05052          53 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA  132 (263)
T ss_pred             HHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCc
Confidence            333333344444448888888888999999999999998875432 3578888899999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.+++
T Consensus       133 ~nil~~~~~~~kl  145 (263)
T cd05052         133 RNCLVGENHLVKV  145 (263)
T ss_pred             ceEEEcCCCcEEe
Confidence            9999998887764


No 100
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.78  E-value=2.7e-18  Score=114.29  Aligned_cols=95  Identities=28%  Similarity=0.503  Sum_probs=81.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+++++.++|+|++++++++......+++|||++++++...+... ...+++.....++.|++.++.|+|+.|++|+|
T Consensus        47 ~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  126 (256)
T cd08221          47 LNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRD  126 (256)
T ss_pred             HHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence            45566666666677777999999999999999999999999887653 34578899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.++|
T Consensus       127 l~p~ni~~~~~~~~kl  142 (256)
T cd08221         127 IKTLNIFLTKAGLIKL  142 (256)
T ss_pred             CChHhEEEeCCCCEEE
Confidence            9999999998887764


No 101
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.78  E-value=1.9e-18  Score=119.24  Aligned_cols=94  Identities=34%  Similarity=0.577  Sum_probs=81.4

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|..++..+ +|+|++.+++++......|++|||+++|+|...+.. ...+++..+..++.|++.|+.|+|+.|++|||
T Consensus        43 ~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrD  121 (327)
T cd05617          43 QTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHERGIIYRD  121 (327)
T ss_pred             HHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            3455566555 478888899999999999999999999999877644 45789999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       122 lkp~Nili~~~~~~kl  137 (327)
T cd05617         122 LKLDNVLLDADGHIKL  137 (327)
T ss_pred             CCHHHEEEeCCCCEEE
Confidence            9999999999888764


No 102
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.78  E-value=5e-18  Score=112.82  Aligned_cols=95  Identities=27%  Similarity=0.505  Sum_probs=79.6

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++++++.+..++..|++|||++++++..++... ...++......++.+++.++.|+|+.|++|+|
T Consensus        47 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~d  126 (256)
T cd08529          47 IDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRD  126 (256)
T ss_pred             HHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            34555555666666666888888889999999999999999887653 35678888999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       127 l~~~nili~~~~~~~l  142 (256)
T cd08529         127 IKSLNLFLDAYDNVKI  142 (256)
T ss_pred             CCcceEEEeCCCCEEE
Confidence            9999999998887654


No 103
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.78  E-value=2.8e-18  Score=115.97  Aligned_cols=97  Identities=26%  Similarity=0.400  Sum_probs=81.4

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      ....|+.+++.++|+|++++.+.+...  ...+++|||+++++|.+++......+++.....++.+++.++.|+|++|++
T Consensus        52 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~  131 (284)
T cd05079          52 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYV  131 (284)
T ss_pred             HHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            345667777777777777788888764  568999999999999988765444578889999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      |+|+||+||+++.++.+++
T Consensus       132 H~dlkp~Nil~~~~~~~~l  150 (284)
T cd05079         132 HRDLAARNVLVESEHQVKI  150 (284)
T ss_pred             ecccchheEEEcCCCCEEE
Confidence            9999999999998887664


No 104
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.78  E-value=2.7e-18  Score=115.43  Aligned_cols=95  Identities=26%  Similarity=0.463  Sum_probs=78.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE--------KPLTEQQIRYICHYMCKALQFLHT  111 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lh~  111 (134)
                      ..|+.++++++|+|++++++.+......|++|||+++++|.+++....        ..+++.....++.|++.++.|+|+
T Consensus        56 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~  135 (275)
T cd05046          56 RRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN  135 (275)
T ss_pred             HHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh
Confidence            345555566666666668888888888999999999999998875432        157899999999999999999999


Q ss_pred             CCCccCCCCCCCeEEecCCeeeC
Q psy15406        112 HRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++++|+|+||+|++++.++.+++
T Consensus       136 ~~i~H~dlkp~Nili~~~~~~~l  158 (275)
T cd05046         136 ARFVHRDLAARNCLVSSQREVKV  158 (275)
T ss_pred             cCcccCcCccceEEEeCCCcEEE
Confidence            99999999999999998877653


No 105
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.78  E-value=2.3e-18  Score=118.68  Aligned_cols=89  Identities=31%  Similarity=0.556  Sum_probs=79.3

Q ss_pred             HHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCe
Q psy15406         45 ILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNV  124 (134)
Q Consensus        45 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~ni  124 (134)
                      +++.++|||++++++.+..+...|++|||+++|++...+.. ...+++..+..++.|++.|+.|+|+.|++||||||+||
T Consensus        49 ~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NI  127 (325)
T cd05604          49 LLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENI  127 (325)
T ss_pred             HHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHe
Confidence            45667888888899999999999999999999999877654 46788999999999999999999999999999999999


Q ss_pred             EEecCCeeeC
Q psy15406        125 LLTMSGGVKL  134 (134)
Q Consensus       125 ll~~~~~~~i  134 (134)
                      +++.+|.++|
T Consensus       128 ll~~~~~~kL  137 (325)
T cd05604         128 LLDSQGHVVL  137 (325)
T ss_pred             EECCCCCEEE
Confidence            9999888764


No 106
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.78  E-value=1.4e-18  Score=116.20  Aligned_cols=100  Identities=40%  Similarity=0.705  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-C
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-E   87 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~   87 (134)
                      ..+.|.+|++.+++++||||++                          +++.+...+..++++||+++|+|.+++... .
T Consensus        44 ~~~~~~~e~~~l~~l~h~ni~~--------------------------~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~   97 (259)
T PF07714_consen   44 EEEEFLNEIQILRKLRHPNIVK--------------------------LYGFCIENEPLFLVMEYCPGGSLDDYLKSKNK   97 (259)
T ss_dssp             HHHHHHHHHHHHHTHSBTTBE---------------------------EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT
T ss_pred             cceeeeeccccccccccccccc--------------------------cccccccccccccccccccccccccccccccc
Confidence            4567777777777777766666                          899999778899999999999999988775 4


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         88 KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        88 ~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ..++......++.|++.|+.|+|+.+++|++++++||+++.++.+||
T Consensus        98 ~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl  144 (259)
T PF07714_consen   98 EPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKL  144 (259)
T ss_dssp             TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            67889999999999999999999999999999999999999998875


No 107
>KOG0574|consensus
Probab=99.78  E-value=7.5e-19  Score=117.66  Aligned_cols=102  Identities=40%  Similarity=0.803  Sum_probs=86.9

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL   86 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   86 (134)
                      .....+.++|+.+|.++.+|+||++|                          +.+.....+|+|||||..|+..+.+..+
T Consensus        69 ~sDLQEIIKEISIMQQC~S~yVVKYY--------------------------GSYFK~sDLWIVMEYCGAGSiSDI~R~R  122 (502)
T KOG0574|consen   69 DTDLQEIIKEISIMQQCKSKYVVKYY--------------------------GSYFKHSDLWIVMEYCGAGSISDIMRAR  122 (502)
T ss_pred             cchHHHHHHHHHHHHHcCCchhhhhh--------------------------hhhccCCceEeehhhcCCCcHHHHHHHh
Confidence            44566677777777777777777754                          4555567799999999999999999888


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         87 EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        87 ~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +..+.+..+..++...+.|+.|+|...=+|||||+.||+++.+|.+|+
T Consensus       123 ~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKL  170 (502)
T KOG0574|consen  123 RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKL  170 (502)
T ss_pred             cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhh
Confidence            889999999999999999999999999999999999999999998764


No 108
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.78  E-value=4.3e-18  Score=115.36  Aligned_cols=95  Identities=25%  Similarity=0.425  Sum_probs=80.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC------------CCCCHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE------------KPLTEQQIRYICHYMCKALQ  107 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~------------~~~~~~~~~~~~~~i~~~l~  107 (134)
                      ..|+++++.++|+|++++++.+......++++||++++++..++....            ..+++.....++.|++.++.
T Consensus        55 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~  134 (288)
T cd05093          55 HREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMV  134 (288)
T ss_pred             HHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHH
Confidence            445666666666666669999998899999999999999988876422            24788999999999999999


Q ss_pred             HHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        108 FLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       108 ~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |+|++|++|||+||+||+++.++.+++
T Consensus       135 ~lH~~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093         135 YLASQHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             HHHhCCeeecccCcceEEEccCCcEEe
Confidence            999999999999999999998887764


No 109
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.78  E-value=1.6e-18  Score=121.64  Aligned_cols=95  Identities=29%  Similarity=0.393  Sum_probs=78.0

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-------------------------------
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-------------------------------   87 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------------------------------   87 (134)
                      .+|+.+++.+ +||||+++++.+..++..+++|||+++|+|..++....                               
T Consensus        86 ~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  165 (375)
T cd05104          86 MSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSL  165 (375)
T ss_pred             HHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhh
Confidence            4466666666 57777779999999999999999999999988775321                               


Q ss_pred             -------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCe
Q psy15406         88 -------------------------------------------KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNV  124 (134)
Q Consensus        88 -------------------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~ni  124 (134)
                                                                 ..+++.....++.|++.|+.|+|+.|++|+|+||+||
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni  245 (375)
T cd05104         166 NEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNI  245 (375)
T ss_pred             hhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhE
Confidence                                                       1356677888999999999999999999999999999


Q ss_pred             EEecCCeeeC
Q psy15406        125 LLTMSGGVKL  134 (134)
Q Consensus       125 ll~~~~~~~i  134 (134)
                      +++.++.+++
T Consensus       246 ll~~~~~~kl  255 (375)
T cd05104         246 LLTHGRITKI  255 (375)
T ss_pred             EEECCCcEEE
Confidence            9998776653


No 110
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.77  E-value=3.2e-18  Score=118.30  Aligned_cols=95  Identities=27%  Similarity=0.496  Sum_probs=85.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.++..++|++++.+++.+......|++|||+++|+|.+++......+++..+..++.|++.++.|+|+.|++||||
T Consensus        49 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDl  128 (332)
T cd05623          49 REERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDI  128 (332)
T ss_pred             HHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            45677778888889988999999999999999999999999988765567889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       129 kp~Nili~~~~~~kL  143 (332)
T cd05623         129 KPDNILMDMNGHIRL  143 (332)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887764


No 111
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.77  E-value=1.7e-18  Score=121.57  Aligned_cols=96  Identities=30%  Similarity=0.419  Sum_probs=79.2

Q ss_pred             hHHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC------------------------------
Q psy15406         39 GKLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE------------------------------   87 (134)
Q Consensus        39 ~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~------------------------------   87 (134)
                      ...|+.+++.+ +|+|++++++.+...+..+++|||+++|+|.+++....                              
T Consensus        88 ~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (374)
T cd05106          88 LMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYI  167 (374)
T ss_pred             HHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccc
Confidence            34566666666 57777779999999999999999999999988764311                              


Q ss_pred             ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEec
Q psy15406         88 ---------------------------------------KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTM  128 (134)
Q Consensus        88 ---------------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~  128 (134)
                                                             ..++...+..++.|++.|+.|+|++|++|||+||+||+++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~  247 (374)
T cd05106         168 RSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD  247 (374)
T ss_pred             cccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC
Confidence                                                   13566778899999999999999999999999999999998


Q ss_pred             CCeeeC
Q psy15406        129 SGGVKL  134 (134)
Q Consensus       129 ~~~~~i  134 (134)
                      ++.++|
T Consensus       248 ~~~~kL  253 (374)
T cd05106         248 GRVAKI  253 (374)
T ss_pred             CCeEEE
Confidence            877664


No 112
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.77  E-value=4.5e-18  Score=112.85  Aligned_cols=95  Identities=24%  Similarity=0.354  Sum_probs=81.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+...+..+++|||++++++..++......+.+.....++.+++.++.|+|+.|++|+|+
T Consensus        40 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl  119 (250)
T cd05085          40 LSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDL  119 (250)
T ss_pred             HHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence            34566666667777777999999889999999999999999887654456788899999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+|++++.++.+++
T Consensus       120 ~p~nili~~~~~~~l  134 (250)
T cd05085         120 AARNCLVGENNVLKI  134 (250)
T ss_pred             ChheEEEcCCCeEEE
Confidence            999999998887764


No 113
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.77  E-value=2.5e-18  Score=118.46  Aligned_cols=90  Identities=27%  Similarity=0.498  Sum_probs=79.1

Q ss_pred             HHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q psy15406         43 IDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAG  122 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~  122 (134)
                      +.+++.++|||++++++++..+...|++|||++++++...+..  ..+++..+..++.|++.|+.|+|+.|++||||||+
T Consensus        53 ~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~  130 (324)
T cd05589          53 FETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLD  130 (324)
T ss_pred             HHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHH
Confidence            3444566788888899999999999999999999999876643  56899999999999999999999999999999999


Q ss_pred             CeEEecCCeeeC
Q psy15406        123 NVLLTMSGGVKL  134 (134)
Q Consensus       123 nill~~~~~~~i  134 (134)
                      ||+++.++.++|
T Consensus       131 Nill~~~~~~kL  142 (324)
T cd05589         131 NLLLDTEGFVKI  142 (324)
T ss_pred             HeEECCCCcEEe
Confidence            999999888764


No 114
>KOG4250|consensus
Probab=99.77  E-value=2.2e-18  Score=124.93  Aligned_cols=102  Identities=26%  Similarity=0.476  Sum_probs=80.0

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL   86 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   86 (134)
                      .+.++++.+|+++|+++.|||||++++.-               ++...     ........++||||++|+|...+.+.
T Consensus        52 ~r~~e~~~~EieilkKLnh~NIVk~f~ie---------------e~~~~-----~~~~~~~vlvmEyC~gGsL~~~L~~P  111 (732)
T KOG4250|consen   52 LRPRERWCREIEILKKLNHPNIVKLFDIE---------------ETKFL-----GLVTRLPVLVMEYCSGGSLRKVLNSP  111 (732)
T ss_pred             cchHHHHHHHHHHHHHcCchhhhhhcccC---------------Ccccc-----CcccccceEEEeecCCCcHHHHhcCc
Confidence            44567788999999999999999866531               11000     01123467999999999999887543


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEec
Q psy15406         87 --EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTM  128 (134)
Q Consensus        87 --~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~  128 (134)
                        ...+++..++.++..+..|+.|+|.+||+||||||+||++..
T Consensus       112 EN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~  155 (732)
T KOG4250|consen  112 ENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQI  155 (732)
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEee
Confidence              246899999999999999999999999999999999999853


No 115
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.77  E-value=7.3e-18  Score=114.72  Aligned_cols=95  Identities=29%  Similarity=0.415  Sum_probs=77.1

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------CCCCHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------KPLTEQQIRYICHYMC  103 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i~  103 (134)
                      ..|+.+++++ +|||++++++.+...+..|+++||++++++.+++....               ..++......++.|++
T Consensus        50 ~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~  129 (297)
T cd05089          50 AGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVA  129 (297)
T ss_pred             HHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHH
Confidence            3345555555 45566668888888888999999999999998875421               2467888899999999


Q ss_pred             HHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        104 KALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       104 ~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .|+.|+|+.|++|+||||+|++++.++.++|
T Consensus       130 ~al~~lH~~~ivH~dlkp~Nill~~~~~~kl  160 (297)
T cd05089         130 TGMQYLSEKQFIHRDLAARNVLVGENLASKI  160 (297)
T ss_pred             HHHHHHHHCCcccCcCCcceEEECCCCeEEE
Confidence            9999999999999999999999998887764


No 116
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.77  E-value=2e-18  Score=116.80  Aligned_cols=93  Identities=30%  Similarity=0.537  Sum_probs=75.4

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+..++..|++|||++++.+..+ ......+++..+..++.|++.|+.|+|+.|++|+|+|
T Consensus        49 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~-~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk  127 (287)
T cd07848          49 RELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELL-EEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIK  127 (287)
T ss_pred             HHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            345555555555555577788888899999999998776644 3334568889999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.++|
T Consensus       128 p~Nill~~~~~~kl  141 (287)
T cd07848         128 PENLLISHNDVLKL  141 (287)
T ss_pred             HHHEEEcCCCcEEE
Confidence            99999998887764


No 117
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.77  E-value=4.8e-18  Score=115.26  Aligned_cols=95  Identities=24%  Similarity=0.380  Sum_probs=80.6

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------CCCCHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------KPLTEQQIRYICHYMCK  104 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i~~  104 (134)
                      ..|+.+++.++|+|++++++.+......+++|||++++++.+++....               ..+++.....++.|++.
T Consensus        55 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~  134 (291)
T cd05094          55 QREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIAS  134 (291)
T ss_pred             HHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHH
Confidence            345666667777777779999999899999999999999998875421               23678889999999999


Q ss_pred             HHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        105 ALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       105 ~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++.|+|++|++|+|+||+||+++.++.+++
T Consensus       135 al~~lH~~~i~H~dlkp~Nil~~~~~~~~l  164 (291)
T cd05094         135 GMVYLASQHFVHRDLATRNCLVGANLLVKI  164 (291)
T ss_pred             HHHHHHhCCeeecccCcceEEEccCCcEEE
Confidence            999999999999999999999998887764


No 118
>KOG0586|consensus
Probab=99.77  E-value=2e-18  Score=123.39  Aligned_cols=95  Identities=28%  Similarity=0.532  Sum_probs=82.1

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..+|+++|+.++||||++++.+..++..+|+||||+.+|.+.+++.. .+...+..+...+.|++.++.|+|+..++|||
T Consensus       102 ~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~-~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrd  180 (596)
T KOG0586|consen  102 LGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVK-HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRD  180 (596)
T ss_pred             HHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHh-cccchhhhhhhhhHHHHHHHHHHhhcceeccc
Confidence            34566666666666666699999999999999999999999999876 45666688999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +|++|++++.+.++||
T Consensus       181 Lk~eNilL~~~mnikI  196 (596)
T KOG0586|consen  181 LKAENILLDENMNIKI  196 (596)
T ss_pred             cchhhcccccccceee
Confidence            9999999999887775


No 119
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.77  E-value=4.6e-18  Score=114.21  Aligned_cols=94  Identities=27%  Similarity=0.415  Sum_probs=78.2

Q ss_pred             HHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------CCCCHHHHHHHHHHHHH
Q psy15406         41 LWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------KPLTEQQIRYICHYMCK  104 (134)
Q Consensus        41 ~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i~~  104 (134)
                      .|+.+++.+ +|||++++++.+...+..|++|||++++++.+++....               ..++......++.+++.
T Consensus        44 ~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~  123 (270)
T cd05047          44 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR  123 (270)
T ss_pred             HHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHH
Confidence            355555555 46666669999998899999999999999998875421               23678888999999999


Q ss_pred             HHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        105 ALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       105 ~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |+.|+|+.|++|+|+||+|++++.++.+++
T Consensus       124 al~~lH~~~i~H~dikp~nili~~~~~~kl  153 (270)
T cd05047         124 GMDYLSQKQFIHRDLAARNILVGENYVAKI  153 (270)
T ss_pred             HHHHHHHCCEeecccccceEEEcCCCeEEE
Confidence            999999999999999999999998887764


No 120
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.77  E-value=5e-18  Score=113.42  Aligned_cols=95  Identities=21%  Similarity=0.320  Sum_probs=80.5

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.++++++|+|++++++.+......|++||+++++++.+++.... ..+++.....++.+++.++.++|+.|++|+|
T Consensus        49 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  128 (261)
T cd05068          49 LAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRD  128 (261)
T ss_pred             HHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            345666666666666669998888889999999999999998876532 3578899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       129 l~p~Nil~~~~~~~~l  144 (261)
T cd05068         129 LAARNVLVGENNICKV  144 (261)
T ss_pred             CCcceEEEcCCCCEEE
Confidence            9999999998887764


No 121
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.77  E-value=4.5e-18  Score=115.34  Aligned_cols=96  Identities=29%  Similarity=0.483  Sum_probs=83.4

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|++++++++|||++++++.+..+...+++|||++++++.+++.. ...++......++.|++.++.|+|+.|++|+
T Consensus        47 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~  125 (290)
T cd05580          47 HVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK-SGRFPEPVARFYAAQVVLALEYLHSLDIVYR  125 (290)
T ss_pred             HHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence            345566777777777777799999999999999999999999988755 3678899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.++|
T Consensus       126 dl~p~nili~~~~~~kl  142 (290)
T cd05580         126 DLKPENLLLDSDGYIKI  142 (290)
T ss_pred             CCCHHHEEECCCCCEEE
Confidence            99999999998887764


No 122
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.77  E-value=7.7e-18  Score=112.37  Aligned_cols=93  Identities=17%  Similarity=0.327  Sum_probs=77.6

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      |+.+++.++|+|++++++.+......+++|||++++++.+++... ...++......++.+++.++.|+|+.|++|+|++
T Consensus        52 e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~  131 (261)
T cd05148          52 EVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLA  131 (261)
T ss_pred             HHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccC
Confidence            444555555555555888888888999999999999999887653 3457888999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+|++++.++.+++
T Consensus       132 ~~nilv~~~~~~kl  145 (261)
T cd05148         132 ARNILVGEDLVCKV  145 (261)
T ss_pred             cceEEEcCCceEEE
Confidence            99999998887764


No 123
>KOG0193|consensus
Probab=99.77  E-value=8.3e-19  Score=125.44  Aligned_cols=102  Identities=25%  Similarity=0.468  Sum_probs=91.8

Q ss_pred             chhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH
Q psy15406          6 GEEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE   85 (134)
Q Consensus         6 ~~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   85 (134)
                      .++..+.|..||.++|+-+|.||+-                          +.+++..+.. -|++.+|+|.+|+.++..
T Consensus       428 t~~qlqaFKnEVa~lkkTRH~NIlL--------------------------FMG~~~~p~~-AIiTqwCeGsSLY~hlHv  480 (678)
T KOG0193|consen  428 TPEQLQAFKNEVAVLKKTRHENILL--------------------------FMGACMNPPL-AIITQWCEGSSLYTHLHV  480 (678)
T ss_pred             CHHHHHHHHHHHHHHhhcchhhhee--------------------------eehhhcCCce-eeeehhccCchhhhhccc
Confidence            3568899999999999999999997                          6777776665 899999999999999877


Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         86 LEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        86 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ....+.......++.|++.|+.|||.++|+|||+|..||++..++.+||
T Consensus       481 ~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkI  529 (678)
T KOG0193|consen  481 QETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKI  529 (678)
T ss_pred             hhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEE
Confidence            6677888999999999999999999999999999999999999998876


No 124
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.77  E-value=4.4e-18  Score=116.97  Aligned_cols=94  Identities=32%  Similarity=0.489  Sum_probs=81.2

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|..++..+ +|||++++++.+......|++|||+++|+|...+.. ...+++..+..++.|++.++.|+|+.|++|+|
T Consensus        43 ~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d  121 (318)
T cd05570          43 MTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHERGIIYRD  121 (318)
T ss_pred             HHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccC
Confidence            3455566555 578888899999999999999999999999877654 45789999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+||+++.++.++|
T Consensus       122 lkp~Nill~~~~~~kl  137 (318)
T cd05570         122 LKLDNVLLDSEGHIKI  137 (318)
T ss_pred             CCHHHeEECCCCcEEe
Confidence            9999999999888764


No 125
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.77  E-value=6.8e-18  Score=112.19  Aligned_cols=95  Identities=22%  Similarity=0.386  Sum_probs=81.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh--------CCCCCHHHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL--------EKPLTEQQIRYICHYMCKALQFLHT  111 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~lh~  111 (134)
                      ..|+++++.++|+|++++++.+..+...+++|||++++++.+++...        ...+++.....++.|++.++.|+|+
T Consensus        44 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~  123 (262)
T cd00192          44 LKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS  123 (262)
T ss_pred             HHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc
Confidence            44555566666666666888888888999999999999999988664        3668999999999999999999999


Q ss_pred             CCCccCCCCCCCeEEecCCeeeC
Q psy15406        112 HRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +|++|+|++|+||+++.++.+++
T Consensus       124 ~~i~H~di~p~nili~~~~~~~l  146 (262)
T cd00192         124 KKFVHRDLAARNCLVGEDLVVKI  146 (262)
T ss_pred             CCcccCccCcceEEECCCCcEEE
Confidence            99999999999999999887764


No 126
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.77  E-value=8.2e-18  Score=112.00  Aligned_cols=96  Identities=25%  Similarity=0.346  Sum_probs=79.9

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ....|+.++++++|+|++++++.+.. ...++++|+++++++.+.+.+.. ..+++.....++.|++.++.|+|+.|++|
T Consensus        42 ~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H  120 (257)
T cd05040          42 DFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIH  120 (257)
T ss_pred             HHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            33455566666666666668888877 78999999999999998886644 46789999999999999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      +|++|+|++++.++.+++
T Consensus       121 ~di~p~nil~~~~~~~kl  138 (257)
T cd05040         121 RDLAARNILLASDDKVKI  138 (257)
T ss_pred             cccCcccEEEecCCEEEe
Confidence            999999999998888764


No 127
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.77  E-value=6.3e-18  Score=112.68  Aligned_cols=95  Identities=26%  Similarity=0.446  Sum_probs=84.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+...+..+++||+++++++.+++......+++.....++.|++.++.|+|+.|++|+|+
T Consensus        47 ~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl  126 (256)
T cd05059          47 IEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDL  126 (256)
T ss_pred             HHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            45677888888888888999999889999999999999999887654456789999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       127 ~p~ni~i~~~~~~kl  141 (256)
T cd05059         127 AARNCLVGEDNVVKV  141 (256)
T ss_pred             cHhhEEECCCCcEEE
Confidence            999999998887764


No 128
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.77  E-value=5.6e-18  Score=116.65  Aligned_cols=89  Identities=34%  Similarity=0.571  Sum_probs=79.9

Q ss_pred             HHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCe
Q psy15406         45 ILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNV  124 (134)
Q Consensus        45 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~ni  124 (134)
                      +++.++|||++++++.+......|++|||+++|++...+.. ...+++..+..++.|++.|+.|+|++|++||||||+||
T Consensus        49 ~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NI  127 (323)
T cd05575          49 LLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENI  127 (323)
T ss_pred             HHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHe
Confidence            45678899999999999999999999999999999887654 46788999999999999999999999999999999999


Q ss_pred             EEecCCeeeC
Q psy15406        125 LLTMSGGVKL  134 (134)
Q Consensus       125 ll~~~~~~~i  134 (134)
                      +++.+|.++|
T Consensus       128 ll~~~~~~kl  137 (323)
T cd05575         128 LLDSQGHVVL  137 (323)
T ss_pred             EECCCCcEEE
Confidence            9999888764


No 129
>KOG4721|consensus
Probab=99.77  E-value=3.8e-18  Score=122.09  Aligned_cols=95  Identities=25%  Similarity=0.461  Sum_probs=86.7

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...+|+-|+.++|+||+.|.+.|.+...+||+||||+.|.|...+.. ...........|..+|+.|+.|||.+.|+|||
T Consensus       159 kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRD  237 (904)
T KOG4721|consen  159 KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRD  237 (904)
T ss_pred             hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhc
Confidence            34569999999999999999999999999999999999999998754 56778888889999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +|..|||+..+..+||
T Consensus       238 LKSPNiLIs~~d~VKI  253 (904)
T KOG4721|consen  238 LKSPNILISYDDVVKI  253 (904)
T ss_pred             cCCCceEeeccceEEe
Confidence            9999999999988876


No 130
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.77  E-value=6.9e-18  Score=113.89  Aligned_cols=95  Identities=25%  Similarity=0.377  Sum_probs=82.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+++++.++|||++++++.+..+...|++|||++++++...+... ...+++..+..++.|++.|+.|+|+.|++|+|
T Consensus        41 ~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  120 (277)
T cd05607          41 LLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD  120 (277)
T ss_pred             HHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence            34778888888999999999999999999999999999998776543 23578888889999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       121 ikp~Nili~~~~~~~l  136 (277)
T cd05607         121 MKPENVLLDDQGNCRL  136 (277)
T ss_pred             CChHhEEEcCCCCEEE
Confidence            9999999998887654


No 131
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.77  E-value=4.8e-18  Score=116.73  Aligned_cols=91  Identities=31%  Similarity=0.505  Sum_probs=78.8

Q ss_pred             HHHHhh-CCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         43 IDILSD-CKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        43 ~~~~~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      ..++.. .+|||++++++.+..++..|++|||+++|+|...+.. ...+++..+..++.|++.|+.|+|+.|++||||||
T Consensus        46 ~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp  124 (316)
T cd05592          46 RRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKL  124 (316)
T ss_pred             HHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence            334433 3688888899999999999999999999999887754 45788999999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.++|
T Consensus       125 ~Nill~~~~~~kL  137 (316)
T cd05592         125 DNVLLDKDGHIKI  137 (316)
T ss_pred             HHeEECCCCCEEE
Confidence            9999998888764


No 132
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.77  E-value=6.1e-18  Score=115.74  Aligned_cols=95  Identities=28%  Similarity=0.591  Sum_probs=82.2

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~  117 (134)
                      ...|++++++++|||++++++.+..++..+++|||+++++|..++.. ...+++.....++.|++.++.|+|+ .+++|+
T Consensus        46 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~  124 (308)
T cd06615          46 IIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPENILGKISIAVLRGLTYLREKHKIMHR  124 (308)
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEEC
Confidence            44567777777777777799999999999999999999999988765 3668899999999999999999997 589999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       125 dl~p~nil~~~~~~~~l  141 (308)
T cd06615         125 DVKPSNILVNSRGEIKL  141 (308)
T ss_pred             CCChHHEEEecCCcEEE
Confidence            99999999998877654


No 133
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.77  E-value=3.8e-18  Score=116.68  Aligned_cols=94  Identities=29%  Similarity=0.469  Sum_probs=79.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+..++..+++|||+++ ++...+......++...+..++.|++.|+.|+|+.|++|||+
T Consensus        52 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dl  130 (309)
T cd07872          52 IREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDL  130 (309)
T ss_pred             HHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            3466677777777777799999999999999999976 676666554556788889999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       131 kp~Nill~~~~~~kl  145 (309)
T cd07872         131 KPQNLLINERGELKL  145 (309)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887764


No 134
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.76  E-value=3.2e-18  Score=118.11  Aligned_cols=92  Identities=23%  Similarity=0.443  Sum_probs=70.7

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC-----CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN-----GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      +|+.+++.++|||++++++.+...     ...|++|||+. +++...+.. ...+++.....++.|++.|+.|+|+.|++
T Consensus        48 ~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~iv  125 (338)
T cd07859          48 REIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVF  125 (338)
T ss_pred             HHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            344444444555555566655432     35899999996 577776643 45688999999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      ||||||+||+++.++.++|
T Consensus       126 H~dlkp~NIll~~~~~~kL  144 (338)
T cd07859         126 HRDLKPKNILANADCKLKI  144 (338)
T ss_pred             cCCCCHHHeEECCCCcEEE
Confidence            9999999999999988764


No 135
>PHA02988 hypothetical protein; Provisional
Probab=99.76  E-value=5.2e-18  Score=114.94  Aligned_cols=94  Identities=22%  Similarity=0.295  Sum_probs=77.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeee----CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT----NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTH-RV  114 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i  114 (134)
                      .+|+.++++++|||++++++++..    ....+++|||+++|+|..++.+ ...+++.....++.+++.|+.|+|.. ++
T Consensus        66 ~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~  144 (283)
T PHA02988         66 ENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNK  144 (283)
T ss_pred             HHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCCC
Confidence            455666666666666668888766    3568999999999999998765 35678888889999999999999984 89


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +|||+||+|++++.++.+||
T Consensus       145 ~Hrdlkp~nill~~~~~~kl  164 (283)
T PHA02988        145 PYKNLTSVSFLVTENYKLKI  164 (283)
T ss_pred             CCCcCChhhEEECCCCcEEE
Confidence            99999999999999888764


No 136
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.76  E-value=7.4e-18  Score=115.07  Aligned_cols=95  Identities=34%  Similarity=0.441  Sum_probs=78.7

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+.+++++ +|+|++++++.+...+..|++|||+++++|..++.... ..+++.....++.+++.++.|+|+++++|+
T Consensus        86 ~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~  165 (302)
T cd05055          86 MSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHR  165 (302)
T ss_pred             HHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehh
Confidence            3455555555 46666669999998899999999999999998876432 237899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |+||+||+++.++.+++
T Consensus       166 dlkp~Nil~~~~~~~~l  182 (302)
T cd05055         166 DLAARNVLLTHGKIVKI  182 (302)
T ss_pred             hhccceEEEcCCCeEEE
Confidence            99999999988877653


No 137
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.76  E-value=5.1e-18  Score=115.34  Aligned_cols=95  Identities=23%  Similarity=0.423  Sum_probs=80.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-----------KPLTEQQIRYICHYMCKALQF  108 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~  108 (134)
                      ..|+++++.++|+|++++++.+......+++|||++++++.+++....           ..++......++.+++.++.|
T Consensus        65 ~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~  144 (295)
T cd05097          65 LKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKY  144 (295)
T ss_pred             HHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHH
Confidence            456667777777777779999999999999999999999988875421           135677888899999999999


Q ss_pred             HHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        109 LHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       109 lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +|+.|++|+|+||+|++++.++.+++
T Consensus       145 lH~~~i~H~dlkp~Nill~~~~~~kl  170 (295)
T cd05097         145 LASLNFVHRDLATRNCLVGNHYTIKI  170 (295)
T ss_pred             HHhcCeeccccChhhEEEcCCCcEEe
Confidence            99999999999999999998877764


No 138
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.76  E-value=6.7e-18  Score=114.04  Aligned_cols=96  Identities=23%  Similarity=0.365  Sum_probs=80.2

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC----------------CCCCHHHHHHHHHHH
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE----------------KPLTEQQIRYICHYM  102 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~~~~~~~~i  102 (134)
                      ...|+.+++.++|+|++++++.+..+...|++|||++++++.+++....                ..+++.....++.++
T Consensus        54 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i  133 (283)
T cd05090          54 FQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQI  133 (283)
T ss_pred             HHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHH
Confidence            3456677777777777779999999999999999999999988874321                235777888899999


Q ss_pred             HHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        103 CKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       103 ~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.++.|+|++|++|+|+||+|++++.++.+++
T Consensus       134 ~~al~~lH~~~i~H~dlkp~nili~~~~~~kl  165 (283)
T cd05090         134 AAGMEYLSSHFFVHKDLAARNILIGEQLHVKI  165 (283)
T ss_pred             HHHHHHHHhcCeehhccccceEEEcCCCcEEe
Confidence            99999999999999999999999998887764


No 139
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.76  E-value=1.1e-17  Score=111.92  Aligned_cols=94  Identities=31%  Similarity=0.627  Sum_probs=77.4

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      .|+.+++.++|+|++++++++..++..+++||+++++++.+++...   ...+++.....++.+++.++.|+|++|++|+
T Consensus        51 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~  130 (267)
T cd08229          51 KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHR  130 (267)
T ss_pred             HHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence            3455555555555555888888889999999999999998876531   2457889999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       131 dl~p~nili~~~~~~~l  147 (267)
T cd08229         131 DIKPANVFITATGVVKL  147 (267)
T ss_pred             CCCHHHEEEcCCCCEEE
Confidence            99999999998887764


No 140
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.76  E-value=6.5e-18  Score=116.42  Aligned_cols=89  Identities=31%  Similarity=0.543  Sum_probs=79.5

Q ss_pred             HHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCe
Q psy15406         45 ILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNV  124 (134)
Q Consensus        45 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~ni  124 (134)
                      +++.++|+|++++++.+...+..|++|||++++++...+.. ...+.+..+..++.|++.|+.|+|+.|++||||||+||
T Consensus        49 ~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Ni  127 (325)
T cd05602          49 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENI  127 (325)
T ss_pred             HHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHe
Confidence            45677889999999999999999999999999999887754 45678888889999999999999999999999999999


Q ss_pred             EEecCCeeeC
Q psy15406        125 LLTMSGGVKL  134 (134)
Q Consensus       125 ll~~~~~~~i  134 (134)
                      +++.++.++|
T Consensus       128 li~~~~~~kl  137 (325)
T cd05602         128 LLDSQGHIVL  137 (325)
T ss_pred             EECCCCCEEE
Confidence            9998887764


No 141
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.76  E-value=6e-18  Score=112.92  Aligned_cols=96  Identities=31%  Similarity=0.519  Sum_probs=83.4

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+.+++.++|||++++++.+..+...++++|+++++++.+.+.. ...+++.....++.+++.++.|+|+.|++|+
T Consensus        50 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~  128 (263)
T cd06625          50 ALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILEGVEYLHSNMIVHR  128 (263)
T ss_pred             HHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            345567777777788888899999999999999999999999887754 3567888899999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.++|
T Consensus       129 dl~p~nilv~~~~~~~l  145 (263)
T cd06625         129 DIKGANILRDSAGNVKL  145 (263)
T ss_pred             CCCHHHEEEcCCCCEEE
Confidence            99999999998887764


No 142
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.76  E-value=1.4e-17  Score=110.84  Aligned_cols=96  Identities=38%  Similarity=0.619  Sum_probs=82.3

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...|+.+++.++|+|++++.+.+.+++..|+++||++++++..++... ...+++.....++.|++.++.|+|+.|++|+
T Consensus        45 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~  124 (255)
T cd08219          45 SRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHR  124 (255)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccC
Confidence            345667777778888888999999999999999999999998876542 3457889999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       125 dl~p~nili~~~~~~~l  141 (255)
T cd08219         125 DIKSKNIFLTQNGKVKL  141 (255)
T ss_pred             CCCcceEEECCCCcEEE
Confidence            99999999998877653


No 143
>KOG0660|consensus
Probab=99.76  E-value=1.5e-18  Score=117.45  Aligned_cols=95  Identities=26%  Similarity=0.508  Sum_probs=75.8

Q ss_pred             chHHHHHHHhhCCCCCccccceeeee-----CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFT-----NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTH  112 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~  112 (134)
                      +.-+|+.+++.++|+||+.+.+.+..     -..+|+|+|+++ .+|...+.. +..+....++.+++|++.|++|+|+.
T Consensus        67 RtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiHSA  144 (359)
T KOG0660|consen   67 RTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIHSA  144 (359)
T ss_pred             HHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh-hHHHHHHHc-CccccHHHHHHHHHHHHHhcchhhcc
Confidence            34555666666666666667776654     234899999994 478877754 45699999999999999999999999


Q ss_pred             CCccCCCCCCCeEEecCCeeeC
Q psy15406        113 RVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       113 ~i~h~dik~~nill~~~~~~~i  134 (134)
                      +++|||+||+|++++.+..+||
T Consensus       145 nViHRDLKPsNll~n~~c~lKI  166 (359)
T KOG0660|consen  145 NVIHRDLKPSNLLLNADCDLKI  166 (359)
T ss_pred             cccccccchhheeeccCCCEEe
Confidence            9999999999999999988775


No 144
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.76  E-value=8.4e-18  Score=114.34  Aligned_cols=95  Identities=23%  Similarity=0.424  Sum_probs=77.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE----------KPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      ..|+.+++.++|+|++++++.+..++..+++||+++++++..++....          ..++......++.|++.++.|+
T Consensus        67 ~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l  146 (296)
T cd05095          67 LKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYL  146 (296)
T ss_pred             HHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            345555666666666669999999999999999999999988875422          1255678899999999999999


Q ss_pred             HHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        110 HTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       110 h~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |+.|++|+|+||+||+++.++.+++
T Consensus       147 H~~~i~H~dlkp~Nili~~~~~~~l  171 (296)
T cd05095         147 SSLNFVHRDLATRNCLVGKNYTIKI  171 (296)
T ss_pred             HHCCeecccCChheEEEcCCCCEEe
Confidence            9999999999999999988877653


No 145
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.76  E-value=1.1e-17  Score=114.14  Aligned_cols=96  Identities=25%  Similarity=0.435  Sum_probs=78.5

Q ss_pred             hHHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------CCCCHHHHHHHHHHH
Q psy15406         39 GKLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------KPLTEQQIRYICHYM  102 (134)
Q Consensus        39 ~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i  102 (134)
                      ...|+.+++.+ +|+|++++++.+......|++|||+++++|..++....               ..++......++.|+
T Consensus        67 ~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi  146 (304)
T cd05101          67 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQV  146 (304)
T ss_pred             HHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHH
Confidence            34455566665 56666669999998999999999999999998876521               235667788899999


Q ss_pred             HHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        103 CKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       103 ~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.|+.|+|++|++|+|+||+||+++.++.+++
T Consensus       147 ~~al~~LH~~givH~dlkp~Nili~~~~~~kl  178 (304)
T cd05101         147 ARGMEYLASQKCIHRDLAARNVLVTENNVMKI  178 (304)
T ss_pred             HHHHHHHHHCCeeecccccceEEEcCCCcEEE
Confidence            99999999999999999999999998887764


No 146
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.76  E-value=6e-18  Score=113.33  Aligned_cols=95  Identities=21%  Similarity=0.331  Sum_probs=82.6

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++.+.+...+..+++||+++++++..++......+++.....++.+++.|+.|+|+.|++|+|+
T Consensus        54 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl  133 (268)
T cd05063          54 LSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDL  133 (268)
T ss_pred             HHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence            34566777777777777999999999999999999999999887665556788999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.+++
T Consensus       134 kp~Nili~~~~~~kl  148 (268)
T cd05063         134 AARNILVNSNLECKV  148 (268)
T ss_pred             chhhEEEcCCCcEEE
Confidence            999999998877653


No 147
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.76  E-value=5.7e-18  Score=116.36  Aligned_cols=94  Identities=26%  Similarity=0.430  Sum_probs=81.0

Q ss_pred             HHHHHHHhh-CCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSD-CKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|..++.. .+|+|++++++.+..++..|++|||+++|+|...+.. ...++...+..++.|++.|+.|+|+.|++|||
T Consensus        43 ~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrD  121 (316)
T cd05620          43 MVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRD  121 (316)
T ss_pred             HHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            334555554 4788888899999999999999999999999887754 45688899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       122 lkp~Nil~~~~~~~kl  137 (316)
T cd05620         122 LKLDNVMLDRDGHIKI  137 (316)
T ss_pred             CCHHHeEECCCCCEEe
Confidence            9999999998887764


No 148
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.76  E-value=2.9e-18  Score=119.38  Aligned_cols=90  Identities=30%  Similarity=0.564  Sum_probs=74.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+||+++++.+...+..+++|||+.++++...     ....+..+..++.|++.|+.|+|+.|++||||
T Consensus       120 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  194 (353)
T PLN00034        120 CREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRHIVHRDI  194 (353)
T ss_pred             HHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence            3455566666666666688899989999999999999887532     23466777889999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       195 kp~NIll~~~~~~kL  209 (353)
T PLN00034        195 KPSNLLINSAKNVKI  209 (353)
T ss_pred             CHHHEEEcCCCCEEE
Confidence            999999999888764


No 149
>KOG1989|consensus
Probab=99.76  E-value=1.2e-18  Score=128.36  Aligned_cols=110  Identities=35%  Similarity=0.526  Sum_probs=84.2

Q ss_pred             cchhHHHHHHHHHHHHhhcC-chhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeee-CCEEEEEEeccCCCCHHHH
Q psy15406          5 EGEEELSDFMIEIDILSDCK-HENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFT-NGKLWMLIEYCDGGAVDSI   82 (134)
Q Consensus         5 ~~~~~~~~~~~E~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~   82 (134)
                      +++.+.+...+||++|++|. |+|||.+++++...                    ..-.. ...+++.||||.+|.|-++
T Consensus        73 ~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~--------------------~~~~~~~~EvllLmEyC~gg~Lvd~  132 (738)
T KOG1989|consen   73 NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAIN--------------------RSSNNGVWEVLLLMEYCKGGSLVDF  132 (738)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCceeeEecccccc--------------------ccCCCceeEEEeehhhccCCcHHHH
Confidence            35667777778888888876 77777755531110                    00111 2347899999998888888


Q ss_pred             HHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCCeEEecCCeeeC
Q psy15406         83 MLEL-EKPLTEQQIRYICHYMCKALQFLHTHR--VIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        83 ~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dik~~nill~~~~~~~i  134 (134)
                      +..+ ...+.+..++.++++++.|+.+||...  ++|||||.+|+|+..+|..|+
T Consensus       133 mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KL  187 (738)
T KOG1989|consen  133 MNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKL  187 (738)
T ss_pred             HHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEe
Confidence            7643 345999999999999999999999987  999999999999999987764


No 150
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.76  E-value=6.3e-18  Score=114.92  Aligned_cols=98  Identities=36%  Similarity=0.737  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK   88 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~   88 (134)
                      ..+.+.+|+.++++++|||+++                          +++.+..+...|++|||++++++..++..  .
T Consensus        62 ~~~~~~~e~~~l~~l~h~~ii~--------------------------~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~  113 (292)
T cd06658          62 RRELLFNEVVIMRDYHHENVVD--------------------------MYNSYLVGDELWVVMEFLEGGALTDIVTH--T  113 (292)
T ss_pred             HHHHHHHHHHHHHhCCCCcHHH--------------------------HHHheecCCeEEEEEeCCCCCcHHHHHhc--C
Confidence            3455667777777777777766                          55666777889999999999999887643  4


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         89 PLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        89 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+++.....++.|++.++.|+|+.+++|+|++|+|++++.++.+++
T Consensus       114 ~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL  159 (292)
T cd06658         114 RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKL  159 (292)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEE
Confidence            6788899999999999999999999999999999999998887764


No 151
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.76  E-value=9.8e-18  Score=113.24  Aligned_cols=93  Identities=32%  Similarity=0.473  Sum_probs=78.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+++++.++|||++++++.+..  ....+++|||++++++.+++..  ..+++.....++.|++.++.|+|++|++|+
T Consensus        54 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~  131 (283)
T cd05080          54 KKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHYIHR  131 (283)
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            446666777777777778887764  3468999999999999888754  468999999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |+||+||+++.++.+++
T Consensus       132 dlkp~Nili~~~~~~~l  148 (283)
T cd05080         132 DLAARNVLLDNDRLVKI  148 (283)
T ss_pred             ccChheEEEcCCCcEEE
Confidence            99999999998877653


No 152
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.76  E-value=1.2e-17  Score=117.90  Aligned_cols=94  Identities=27%  Similarity=0.385  Sum_probs=81.5

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++||||+++++.+..+...++++|++. +++..++.. ...++...+..++.|++.|+.|+|+.|++|||
T Consensus       130 ~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrD  207 (391)
T PHA03212        130 TATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRD  207 (391)
T ss_pred             hHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            3567888888888888889999999999999999986 467666544 35688899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       208 iKP~NIll~~~~~vkL  223 (391)
T PHA03212        208 IKAENIFINHPGDVCL  223 (391)
T ss_pred             CChHhEEEcCCCCEEE
Confidence            9999999998887764


No 153
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.76  E-value=8.7e-18  Score=112.63  Aligned_cols=94  Identities=34%  Similarity=0.504  Sum_probs=76.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCC--CHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPL--TEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+.+++.++|+|++++++.+..+...++++|++++++|...+......+  +......++.|++.++.|+|+.|++|+
T Consensus        53 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~  132 (268)
T cd06624          53 HEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHR  132 (268)
T ss_pred             HHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence            344555555666666668888888899999999999999998876543444  778888899999999999999999999


Q ss_pred             CCCCCCeEEec-CCeee
Q psy15406        118 DLKAGNVLLTM-SGGVK  133 (134)
Q Consensus       118 dik~~nill~~-~~~~~  133 (134)
                      |++|+||+++. ++.++
T Consensus       133 dl~p~nil~~~~~~~~~  149 (268)
T cd06624         133 DIKGDNVLVNTYSGVVK  149 (268)
T ss_pred             CCCHHHEEEcCCCCeEE
Confidence            99999999975 45554


No 154
>KOG0033|consensus
Probab=99.76  E-value=6.1e-18  Score=110.33  Aligned_cols=92  Identities=23%  Similarity=0.355  Sum_probs=81.3

Q ss_pred             HhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         36 FTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        36 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      +....+|+.|++.++||||+.+.+.+...++.|+++|++.|+.+..-+..+ ..+++..+-.+.+|++.++.|+|.++|+
T Consensus        54 ~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~Iv  132 (355)
T KOG0033|consen   54 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIV  132 (355)
T ss_pred             HHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCce
Confidence            344678899999999999999999999999999999999999886555443 4567888888999999999999999999


Q ss_pred             cCCCCCCCeEEec
Q psy15406        116 HRDLKAGNVLLTM  128 (134)
Q Consensus       116 h~dik~~nill~~  128 (134)
                      |||+||+|+++.+
T Consensus       133 HRDvkP~nllLAS  145 (355)
T KOG0033|consen  133 HRDLKPENLLLAS  145 (355)
T ss_pred             eccCChhheeeee
Confidence            9999999999954


No 155
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.76  E-value=1.3e-17  Score=111.66  Aligned_cols=94  Identities=29%  Similarity=0.579  Sum_probs=77.7

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      .|+.+++.++|||++++++.+...+..++++||++++++..++..   ....+++.....++.+++.|+.|+|+++++|+
T Consensus        51 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~  130 (267)
T cd08228          51 KEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHR  130 (267)
T ss_pred             HHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCC
Confidence            345555556666666688888888999999999999999877643   22347888899999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       131 dl~~~nil~~~~~~~~l  147 (267)
T cd08228         131 DIKPANVFITATGVVKL  147 (267)
T ss_pred             CCCHHHEEEcCCCCEEE
Confidence            99999999998887653


No 156
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.76  E-value=1.2e-17  Score=112.67  Aligned_cols=95  Identities=26%  Similarity=0.391  Sum_probs=80.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------CCCCHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------KPLTEQQIRYICHYMCK  104 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i~~  104 (134)
                      ..|+.+++.++|||++++++.+......|++|||++++++.+++....               ..++......++.|++.
T Consensus        56 ~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  135 (283)
T cd05048          56 RQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAA  135 (283)
T ss_pred             HHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHH
Confidence            456666777777777779999998889999999999999988875421               34677888899999999


Q ss_pred             HHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        105 ALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       105 ~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++.|+|+.|++|+|+||+||+++.++.++|
T Consensus       136 al~~lH~~~i~H~dlkp~Nil~~~~~~~~L  165 (283)
T cd05048         136 GMEYLSSHHFVHRDLAARNCLVGEGLTVKI  165 (283)
T ss_pred             HHHHHHhCCeeccccccceEEEcCCCcEEE
Confidence            999999999999999999999998887764


No 157
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.76  E-value=1e-17  Score=112.98  Aligned_cols=94  Identities=20%  Similarity=0.346  Sum_probs=79.5

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+.. ...++++||+++|++.+.+......+++.....++.|++.|+.|+|++|++|+|+
T Consensus        57 ~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di  135 (279)
T cd05057          57 LDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDL  135 (279)
T ss_pred             HHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEeccc
Confidence            445566666666666668888876 7789999999999999888665556889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       136 ~p~nil~~~~~~~kL  150 (279)
T cd05057         136 AARNVLVKTPQHVKI  150 (279)
T ss_pred             CcceEEEcCCCeEEE
Confidence            999999998887764


No 158
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.76  E-value=7.3e-18  Score=116.27  Aligned_cols=95  Identities=24%  Similarity=0.392  Sum_probs=79.7

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...|+.+++.++|+|++++++.+..++..++++||+.++++..++... ...+++..+..++.|++.++.|+|++|++||
T Consensus        46 ~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHr  125 (328)
T cd08226          46 LQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHR  125 (328)
T ss_pred             HHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            344555566666777777999999999999999999999998877643 2357888889999999999999999999999


Q ss_pred             CCCCCCeEEecCCeee
Q psy15406        118 DLKAGNVLLTMSGGVK  133 (134)
Q Consensus       118 dik~~nill~~~~~~~  133 (134)
                      |+||+||+++.++.++
T Consensus       126 Dlkp~Nill~~~~~~~  141 (328)
T cd08226         126 NIKASHILISGDGLVS  141 (328)
T ss_pred             CCCHHHEEEeCCCcEE
Confidence            9999999999887665


No 159
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.76  E-value=7.5e-18  Score=113.05  Aligned_cols=96  Identities=20%  Similarity=0.236  Sum_probs=78.7

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE----KPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      ...|+.++++++|||++++++.+......+++|||+++|++.+++....    ...+......++.|++.++.|+|+.++
T Consensus        42 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  121 (269)
T cd05087          42 FLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNF  121 (269)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCE
Confidence            3445666677777777779998888888999999999999988875421    234566777889999999999999999


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +|+|+||+|++++.++.+++
T Consensus       122 ~H~dlkp~nil~~~~~~~kL  141 (269)
T cd05087         122 IHSDLALRNCLLTADLTVKI  141 (269)
T ss_pred             eccccCcceEEEcCCCcEEE
Confidence            99999999999998877664


No 160
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.76  E-value=7.1e-18  Score=119.32  Aligned_cols=95  Identities=28%  Similarity=0.432  Sum_probs=76.8

Q ss_pred             HHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-------------------------------
Q psy15406         40 KLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-------------------------------   87 (134)
Q Consensus        40 ~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------------------------------   87 (134)
                      ..|+++++.+. |||++++++.+......|++|||+++|+|.+++....                               
T Consensus        88 ~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (400)
T cd05105          88 MSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYV  167 (400)
T ss_pred             HHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchh
Confidence            34555666664 6666669999998899999999999999987764321                               


Q ss_pred             ----------------------------------------------------------------CCCCHHHHHHHHHHHH
Q psy15406         88 ----------------------------------------------------------------KPLTEQQIRYICHYMC  103 (134)
Q Consensus        88 ----------------------------------------------------------------~~~~~~~~~~~~~~i~  103 (134)
                                                                                      ..+++.....++.|++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~  247 (400)
T cd05105         168 ILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVA  247 (400)
T ss_pred             hhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHH
Confidence                                                                            1356667788999999


Q ss_pred             HHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        104 KALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       104 ~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .|+.|+|..+++|+|+||+||+++.++.+++
T Consensus       248 ~aL~~LH~~~ivH~dikp~Nill~~~~~~kL  278 (400)
T cd05105         248 RGMEFLASKNCVHRDLAARNVLLAQGKIVKI  278 (400)
T ss_pred             HHHHHHHhCCeeCCCCChHhEEEeCCCEEEE
Confidence            9999999999999999999999998877654


No 161
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.76  E-value=7.1e-18  Score=116.19  Aligned_cols=94  Identities=27%  Similarity=0.408  Sum_probs=79.1

Q ss_pred             HHHHHHHhhCCC-CCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKH-ENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|..++..++| ++++.+++++......|++|||+++|+|...+.. ...+++..+..++.|++.|+.|+|+.|++|||
T Consensus        48 ~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  126 (324)
T cd05587          48 MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRD  126 (324)
T ss_pred             HHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            345555666654 4466688899989999999999999999887754 45688899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.+|.++|
T Consensus       127 lkp~Nill~~~~~~kL  142 (324)
T cd05587         127 LKLDNVMLDAEGHIKI  142 (324)
T ss_pred             CCHHHeEEcCCCCEEE
Confidence            9999999998888764


No 162
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.76  E-value=1.1e-17  Score=112.99  Aligned_cols=95  Identities=24%  Similarity=0.362  Sum_probs=79.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC--------------CCCCHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE--------------KPLTEQQIRYICHYMCKA  105 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--------------~~~~~~~~~~~~~~i~~~  105 (134)
                      ..|+.+++.++|+|++++++.+..+...+++|||++++++..++....              ..+++.....++.|++.+
T Consensus        55 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  134 (280)
T cd05092          55 QREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASG  134 (280)
T ss_pred             HHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHH
Confidence            445566666666666669999998899999999999999998876432              236788899999999999


Q ss_pred             HHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        106 LQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       106 l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.|+|+.|++|+|+||+||+++.++.+++
T Consensus       135 l~~LH~~~i~H~dlkp~nil~~~~~~~kL  163 (280)
T cd05092         135 MVYLASLHFVHRDLATRNCLVGQGLVVKI  163 (280)
T ss_pred             HHHHHHCCeecccccHhhEEEcCCCCEEE
Confidence            99999999999999999999998887764


No 163
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.76  E-value=8.1e-18  Score=114.09  Aligned_cols=95  Identities=27%  Similarity=0.486  Sum_probs=80.1

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh---------------CCCCCHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL---------------EKPLTEQQIRYICHYMC  103 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~i~  103 (134)
                      ..|+.+++.+ +|+|++++++.+..++..+++|||+++|++..++...               ...+++.....++.|++
T Consensus        63 ~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~  142 (293)
T cd05053          63 VSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVA  142 (293)
T ss_pred             HHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHH
Confidence            3456666666 5777777999999999999999999999998887532               23577888899999999


Q ss_pred             HHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        104 KALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       104 ~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .++.|+|+.+++|+|+||+||+++.++.+++
T Consensus       143 ~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL  173 (293)
T cd05053         143 RGMEFLASKKCIHRDLAARNVLVTEDHVMKI  173 (293)
T ss_pred             HHHHHHHHCCccccccceeeEEEcCCCeEEe
Confidence            9999999999999999999999998887764


No 164
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.76  E-value=6.1e-18  Score=116.08  Aligned_cols=94  Identities=20%  Similarity=0.326  Sum_probs=78.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+... ..+++++++++|++.+.+......++......++.|++.|+.|+|+.|++|||+
T Consensus        57 ~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dl  135 (316)
T cd05108          57 LDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDL  135 (316)
T ss_pred             HHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence            3455666666677777788887754 467999999999999888765556788888999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       136 kp~Nill~~~~~~kl  150 (316)
T cd05108         136 AARNVLVKTPQHVKI  150 (316)
T ss_pred             chhheEecCCCcEEE
Confidence            999999998887764


No 165
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.76  E-value=7.4e-18  Score=112.36  Aligned_cols=99  Identities=25%  Similarity=0.508  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK   88 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~   88 (134)
                      ..+++.+|++++++++|||++.                          +++.+..+...++++||+.++++...+... .
T Consensus        43 ~~~~~~~e~~~l~~l~h~~i~~--------------------------~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~   95 (258)
T cd05578          43 SVRNVLNERRILQELNHPFLVN--------------------------LWYSFQDEENMYLVVDLLLGGDLRYHLSQK-V   95 (258)
T ss_pred             HHHHHHHHHHHHHhCCCCChHH--------------------------HHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-C
Confidence            4456667777777777777766                          555566677899999999999999887553 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         89 PLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        89 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+++..+..++.+++.++.|+|+++++|+|++|+||+++.++.+++
T Consensus        96 ~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l  141 (258)
T cd05578          96 KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHI  141 (258)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEE
Confidence            7889999999999999999999999999999999999998887754


No 166
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.75  E-value=1.1e-17  Score=111.93  Aligned_cols=94  Identities=39%  Similarity=0.768  Sum_probs=82.6

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .+|+.+++.++|||++++++.+..+...|+++||++++++.+++.. ...+++.....++.|++.++.|+|+.|++|+|+
T Consensus        54 ~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  132 (267)
T cd06645          54 QQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDI  132 (267)
T ss_pred             HHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            4566777777788888899999999999999999999999988754 457899999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       133 kp~nili~~~~~~~l  147 (267)
T cd06645         133 KGANILLTDNGHVKL  147 (267)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887654


No 167
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.75  E-value=4.3e-18  Score=120.11  Aligned_cols=93  Identities=27%  Similarity=0.371  Sum_probs=79.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .+|+.+++.++|+|++++++.+......|++|+++.+ ++..++ .....+++..+..++.|++.|+.|+|..|++||||
T Consensus       134 ~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDl  211 (392)
T PHA03207        134 GREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKC-DLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDV  211 (392)
T ss_pred             HHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcCC-CHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            4567777777777777799999999999999999864 666665 33467899999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       212 kp~Nill~~~~~~~l  226 (392)
T PHA03207        212 KTENIFLDEPENAVL  226 (392)
T ss_pred             CHHHEEEcCCCCEEE
Confidence            999999998887764


No 168
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.75  E-value=9.7e-18  Score=113.80  Aligned_cols=95  Identities=23%  Similarity=0.406  Sum_probs=80.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE----------KPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      ..|+.++++++|+|++++++.+..++..++++|+++++++..++....          ..+++.....++.|++.++.|+
T Consensus        67 ~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~L  146 (296)
T cd05051          67 LKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYL  146 (296)
T ss_pred             HHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            445666666667777779999998899999999999999998875532          1578899999999999999999


Q ss_pred             HHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        110 HTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       110 h~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |+.|++|+|+||+||+++.++.+++
T Consensus       147 H~~~i~H~dlkp~Nili~~~~~~~l  171 (296)
T cd05051         147 ESLNFVHRDLATRNCLVGKNYTIKI  171 (296)
T ss_pred             HHcCccccccchhceeecCCCceEE
Confidence            9999999999999999998877653


No 169
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.75  E-value=9.7e-18  Score=115.24  Aligned_cols=93  Identities=28%  Similarity=0.459  Sum_probs=80.2

Q ss_pred             HHHHHHhh-CCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         41 LWIDILSD-CKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        41 ~~~~~~~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .|..+++. .+|||++++++.+.+.+..|++|||+++|+|...+.. ...++......++.|++.|+.|+|+.|++|||+
T Consensus        44 ~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdi  122 (316)
T cd05619          44 VEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDL  122 (316)
T ss_pred             HHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence            34455554 4788888899999999999999999999999887754 356888889999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       123 kp~Nil~~~~~~~kl  137 (316)
T cd05619         123 KLDNILLDTDGHIKI  137 (316)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887764


No 170
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.75  E-value=1.1e-17  Score=112.65  Aligned_cols=95  Identities=17%  Similarity=0.311  Sum_probs=79.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------KPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      ..|+.+++.++|+|++++++.+......+++|||+++++|.+++....         ..++......++.+++.++.|+|
T Consensus        57 ~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH  136 (277)
T cd05062          57 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN  136 (277)
T ss_pred             HHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            455666777777777779999988889999999999999998875421         12456778889999999999999


Q ss_pred             HCCCccCCCCCCCeEEecCCeeeC
Q psy15406        111 THRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.|++|+|+||+||+++.++.+++
T Consensus       137 ~~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062         137 ANKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             HCCcccCCcchheEEEcCCCCEEE
Confidence            999999999999999998887764


No 171
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.75  E-value=1.1e-17  Score=114.33  Aligned_cols=95  Identities=31%  Similarity=0.465  Sum_probs=82.7

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|+|++++++.+..++..+++||+++++++..++.. ...+++.....++.+++.++.|+|+.|++|+|
T Consensus        48 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  126 (305)
T cd05609          48 VFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVHRD  126 (305)
T ss_pred             HHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            34566777777788888899999999999999999999999988755 35688899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       127 l~p~NIll~~~~~~~l  142 (305)
T cd05609         127 LKPDNLLITSMGHIKL  142 (305)
T ss_pred             CchHHEEECCCCCEEE
Confidence            9999999998887654


No 172
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.75  E-value=1.3e-17  Score=111.06  Aligned_cols=96  Identities=23%  Similarity=0.358  Sum_probs=82.1

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK-PLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...|+.+++.++|+|++++++.+......+++||+++++++.+++..... .+++.....++.|++.++.|+|+.|++|+
T Consensus        47 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~  126 (256)
T cd05039          47 FLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHR  126 (256)
T ss_pred             HHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccch
Confidence            44566667777777777799998888899999999999999988765432 57899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       127 di~p~Nili~~~~~~~l  143 (256)
T cd05039         127 DLAARNVLVSEDLVAKV  143 (256)
T ss_pred             hcccceEEEeCCCCEEE
Confidence            99999999998887764


No 173
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.75  E-value=2.1e-17  Score=111.29  Aligned_cols=95  Identities=25%  Similarity=0.400  Sum_probs=78.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-------------CCCCHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-------------KPLTEQQIRYICHYMCKAL  106 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~~~i~~~l  106 (134)
                      ..|+++++.++|+|++++++.+......|++|||+++++|..++....             ..+++.....++.+++.++
T Consensus        56 ~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l  135 (280)
T cd05049          56 EREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGM  135 (280)
T ss_pred             HHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHH
Confidence            344555555566666668888888899999999999999998875432             2367778888999999999


Q ss_pred             HHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        107 QFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       107 ~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .|+|++|++|+|++|+||+++.++.+++
T Consensus       136 ~~lH~~~i~h~dlkp~nili~~~~~~kl  163 (280)
T cd05049         136 VYLASQHFVHRDLATRNCLVGYDLVVKI  163 (280)
T ss_pred             HHHhhCCeeccccccceEEEcCCCeEEE
Confidence            9999999999999999999998887764


No 174
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.75  E-value=8.3e-18  Score=114.50  Aligned_cols=93  Identities=38%  Similarity=0.704  Sum_probs=80.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.+.|+|++++.+.+..+...|++|||++++++..++.+  ..++......++.|++.++.|+|+.|++|+|+
T Consensus        65 ~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dL  142 (296)
T cd06654          65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDI  142 (296)
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            3455666666777777799999999999999999999999988754  45788889999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.++|
T Consensus       143 kp~Nill~~~~~~kl  157 (296)
T cd06654         143 KSDNILLGMDGSVKL  157 (296)
T ss_pred             CHHHEEEcCCCCEEE
Confidence            999999998887764


No 175
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.75  E-value=1.5e-17  Score=111.57  Aligned_cols=92  Identities=26%  Similarity=0.401  Sum_probs=73.9

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      |+.+++.++|+|++++++.+.. ...|++||+++++++.+++......+++.....++.+++.++.|+|+.|++|+|++|
T Consensus        57 e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p  135 (270)
T cd05056          57 EAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAA  135 (270)
T ss_pred             HHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCh
Confidence            4444444444555557776664 457899999999999998866445688999999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.+++
T Consensus       136 ~nili~~~~~~~l  148 (270)
T cd05056         136 RNVLVSSPDCVKL  148 (270)
T ss_pred             heEEEecCCCeEE
Confidence            9999998877654


No 176
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.75  E-value=1e-17  Score=113.45  Aligned_cols=95  Identities=22%  Similarity=0.333  Sum_probs=80.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++.+.+.+..+...+++|||++++++...+... ...+++..+..++.|++.++.|+|+.|++|+|
T Consensus        48 ~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~d  127 (285)
T cd05632          48 LNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRD  127 (285)
T ss_pred             HHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            34566666667777777999999999999999999999998776543 24689999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+|++++.++.++|
T Consensus       128 ikp~Nili~~~~~~kl  143 (285)
T cd05632         128 LKPENILLDDYGHIRI  143 (285)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999988877654


No 177
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.75  E-value=8.1e-18  Score=114.65  Aligned_cols=93  Identities=28%  Similarity=0.497  Sum_probs=79.7

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+..+...+++|||+++ ++...+......++...+..++.|++.++.|+|+.|++|+|+|
T Consensus        53 ~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlk  131 (301)
T cd07873          53 REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLK  131 (301)
T ss_pred             HHHHHHHhcCCCCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            456666777777777799999999999999999975 7777766555668889999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.+++
T Consensus       132 p~Nil~~~~~~~kl  145 (301)
T cd07873         132 PQNLLINERGELKL  145 (301)
T ss_pred             HHHEEECCCCcEEE
Confidence            99999998887764


No 178
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.75  E-value=1.4e-17  Score=113.51  Aligned_cols=97  Identities=38%  Similarity=0.761  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCC
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKP   89 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~   89 (134)
                      .+.+.+|+.+++.++|||+++                          +++.+..+...|+++||++++++......  ..
T Consensus        62 ~~~~~~e~~~l~~l~hp~i~~--------------------------~~~~~~~~~~~~iv~e~~~~~~L~~~~~~--~~  113 (297)
T cd06659          62 RELLFNEVVIMRDYQHQNVVE--------------------------MYKSYLVGEELWVLMEFLQGGALTDIVSQ--TR  113 (297)
T ss_pred             HHHHHHHHHHHHhCCCCchhh--------------------------hhhheeeCCeEEEEEecCCCCCHHHHHhh--cC
Confidence            344556666666666666665                          66677778889999999999999886643  56


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         90 LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        90 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +++..+..++.|++.++.|+|+.|++|+|++|+||+++.++.++|
T Consensus       114 ~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL  158 (297)
T cd06659         114 LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKL  158 (297)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEE
Confidence            788999999999999999999999999999999999998887764


No 179
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.75  E-value=1.6e-17  Score=111.00  Aligned_cols=95  Identities=31%  Similarity=0.592  Sum_probs=79.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ..|+.++++++|+|++++++.+..+...+++|||++++++..++...   ...++......++.+++.++.|+|+.|++|
T Consensus        50 ~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h  129 (267)
T cd08224          50 LKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMH  129 (267)
T ss_pred             HHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence            44566666666667777888998889999999999999998877532   245788999999999999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      +|++|+||+++.++.+++
T Consensus       130 ~dl~p~nil~~~~~~~~l  147 (267)
T cd08224         130 RDIKPANVFITATGVVKL  147 (267)
T ss_pred             CCcChhhEEECCCCcEEE
Confidence            999999999998887754


No 180
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.75  E-value=1.1e-17  Score=113.44  Aligned_cols=96  Identities=26%  Similarity=0.470  Sum_probs=80.5

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-----------------------CCCCHHHH
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-----------------------KPLTEQQI   95 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----------------------~~~~~~~~   95 (134)
                      ...|+.+++.++|||++++++.+..++..++++||+.++++.+++....                       ..+++..+
T Consensus        50 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  129 (290)
T cd05045          50 LLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDL  129 (290)
T ss_pred             HHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHH
Confidence            4456667777777777779999998899999999999999988765321                       23677888


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         96 RYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        96 ~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ..++.|++.++.|+|+.+++|+|++|+||+++.++.++|
T Consensus       130 ~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl  168 (290)
T cd05045         130 ISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKI  168 (290)
T ss_pred             HHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEe
Confidence            999999999999999999999999999999998887764


No 181
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.75  E-value=1e-17  Score=115.59  Aligned_cols=84  Identities=29%  Similarity=0.474  Sum_probs=76.5

Q ss_pred             CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         50 KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      +|||++.+++.+......|++|||+++|++...+.. ...+++..+..++.|++.|+.|+|++|++||||||+||+++.+
T Consensus        54 ~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~  132 (330)
T cd05586          54 ESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT  132 (330)
T ss_pred             CCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC
Confidence            689999999999999999999999999999877654 4678999999999999999999999999999999999999988


Q ss_pred             CeeeC
Q psy15406        130 GGVKL  134 (134)
Q Consensus       130 ~~~~i  134 (134)
                      +.++|
T Consensus       133 ~~~kl  137 (330)
T cd05586         133 GHIAL  137 (330)
T ss_pred             CCEEE
Confidence            87764


No 182
>KOG0032|consensus
Probab=99.75  E-value=1e-17  Score=117.40  Aligned_cols=90  Identities=31%  Similarity=0.531  Sum_probs=79.9

Q ss_pred             chHHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         38 NGKLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        38 ~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ...+|+.+|+++. |||++++++.|.+...++++||+|.||.|.+.+...  .+++..+..++.|++.++.|+|..|++|
T Consensus        81 ~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvH  158 (382)
T KOG0032|consen   81 DVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVH  158 (382)
T ss_pred             HHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence            3456677777776 888888999999999999999999999999888764  4999999999999999999999999999


Q ss_pred             CCCCCCCeEEecC
Q psy15406        117 RDLKAGNVLLTMS  129 (134)
Q Consensus       117 ~dik~~nill~~~  129 (134)
                      ||+||+|+++...
T Consensus       159 rDlKpEN~L~~~~  171 (382)
T KOG0032|consen  159 RDLKPENLLLASK  171 (382)
T ss_pred             ccCCHHHeeeccc
Confidence            9999999998643


No 183
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.75  E-value=1.9e-17  Score=110.92  Aligned_cols=94  Identities=40%  Similarity=0.800  Sum_probs=82.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.++++++|+|++++++.+..+...|++|||++++++..++.. ...+++.....++.|++.++.|+|+.|++|+|+
T Consensus        54 ~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  132 (267)
T cd06646          54 QQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDI  132 (267)
T ss_pred             HHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            4566777777788888899999999999999999999999887754 356788999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+|++++.++.+++
T Consensus       133 ~p~nill~~~~~~~l  147 (267)
T cd06646         133 KGANILLTDNGDVKL  147 (267)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887764


No 184
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.75  E-value=2.2e-17  Score=110.25  Aligned_cols=94  Identities=22%  Similarity=0.326  Sum_probs=75.6

Q ss_pred             HHHHHHhhCCCCCccccceeee-eCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFF-TNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .|+.+++.++|||++++++.+. .++..+++++|++++++.+++..............++.+++.|+.|+|+.+++|+|+
T Consensus        45 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  124 (262)
T cd05058          45 KEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDL  124 (262)
T ss_pred             HHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence            3455555566666666888654 456688999999999999887654445667777888999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       125 k~~nili~~~~~~kl  139 (262)
T cd05058         125 AARNCMLDESFTVKV  139 (262)
T ss_pred             CcceEEEcCCCcEEE
Confidence            999999998887764


No 185
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.75  E-value=1.6e-17  Score=113.52  Aligned_cols=95  Identities=25%  Similarity=0.454  Sum_probs=79.9

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------CCCCHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------KPLTEQQIRYICHYMC  103 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i~  103 (134)
                      ..|+.+++.+ +|+|++++++.+...+..|++|||+++++|.+++....               ..++......++.|++
T Consensus        71 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~  150 (307)
T cd05098          71 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVA  150 (307)
T ss_pred             HHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHH
Confidence            3456666666 57777779999999999999999999999998876421               2367788889999999


Q ss_pred             HHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        104 KALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       104 ~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .++.|+|+.|++|+|+||+||+++.++.+++
T Consensus       151 ~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL  181 (307)
T cd05098         151 RGMEYLASKKCIHRDLAARNVLVTEDNVMKI  181 (307)
T ss_pred             HHHHHHHHCCcccccccHHheEEcCCCcEEE
Confidence            9999999999999999999999998887764


No 186
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.75  E-value=1.7e-17  Score=119.07  Aligned_cols=95  Identities=19%  Similarity=0.310  Sum_probs=83.5

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|+||+++++.+..++..+++|+++. +++..++......+++..+..++.|++.++.|+|+.|++|||
T Consensus       207 ~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrD  285 (461)
T PHA03211        207 SVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRD  285 (461)
T ss_pred             HHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECc
Confidence            4568889999999999999999999999999999996 577776655445689999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       286 LKP~NILl~~~~~vkL  301 (461)
T PHA03211        286 IKTENVLVNGPEDICL  301 (461)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999998887764


No 187
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.75  E-value=2e-17  Score=125.36  Aligned_cols=94  Identities=26%  Similarity=0.474  Sum_probs=74.9

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh----------CCCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL----------EKPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      +|+.+++.++|||++++++.+..++..|++|||++++++.+++...          ....+......++.|++.|+.|+|
T Consensus        51 rEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH  130 (932)
T PRK13184         51 REAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH  130 (932)
T ss_pred             HHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH
Confidence            3445555555555555999999999999999999999998877532          112345667788999999999999


Q ss_pred             HCCCccCCCCCCCeEEecCCeeeC
Q psy15406        111 THRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.|++|||+||+||+++.+|.++|
T Consensus       131 s~GIIHRDLKPeNILLd~dg~vKL  154 (932)
T PRK13184        131 SKGVLHRDLKPDNILLGLFGEVVI  154 (932)
T ss_pred             HCCccccCCchheEEEcCCCCEEE
Confidence            999999999999999998887654


No 188
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.75  E-value=1.9e-17  Score=113.53  Aligned_cols=96  Identities=25%  Similarity=0.434  Sum_probs=81.0

Q ss_pred             hHHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------CCCCHHHHHHHHHHH
Q psy15406         39 GKLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------KPLTEQQIRYICHYM  102 (134)
Q Consensus        39 ~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i  102 (134)
                      ...|+.+++.+ +|+|++++++.+..++..|++|||+++|+|..++....               ..++......++.|+
T Consensus        64 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  143 (314)
T cd05099          64 LISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQV  143 (314)
T ss_pred             HHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHH
Confidence            34566677777 48888889999998889999999999999998875421               236778888899999


Q ss_pred             HHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        103 CKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       103 ~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.++.|+|++|++|+|+||+|++++.++.+++
T Consensus       144 ~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL  175 (314)
T cd05099         144 ARGMEYLESRRCIHRDLAARNVLVTEDNVMKI  175 (314)
T ss_pred             HHHHHHHHHCCeeeccccceeEEEcCCCcEEE
Confidence            99999999999999999999999998887764


No 189
>KOG0694|consensus
Probab=99.74  E-value=2.3e-18  Score=124.44  Aligned_cols=83  Identities=34%  Similarity=0.595  Sum_probs=76.3

Q ss_pred             CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         50 KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      +||+++.++.+|+++.++|+||||+.||++..+.  ....+++..+..|++.++.|+.|+|++||++||+|.+||+++.+
T Consensus       427 ~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~e  504 (694)
T KOG0694|consen  427 RHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTE  504 (694)
T ss_pred             cCCeEeecccccccCCeEEEEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEccc
Confidence            6999999999999999999999999999855443  23689999999999999999999999999999999999999999


Q ss_pred             CeeeC
Q psy15406        130 GGVKL  134 (134)
Q Consensus       130 ~~~~i  134 (134)
                      |.+||
T Consensus       505 Gh~ki  509 (694)
T KOG0694|consen  505 GHVKI  509 (694)
T ss_pred             CcEEe
Confidence            99986


No 190
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.74  E-value=2.2e-17  Score=111.19  Aligned_cols=91  Identities=41%  Similarity=0.723  Sum_probs=73.7

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      |+.+++.++|+|++++++.+..+...|+++||++++++...+..  ..+++..+..++.+++.++.|+|++|++|+|++|
T Consensus        52 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p  129 (277)
T cd06642          52 EITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDIKA  129 (277)
T ss_pred             HHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCCh
Confidence            34444444444444477777777889999999999999887643  5678899999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.+++
T Consensus       130 ~ni~i~~~~~~~l  142 (277)
T cd06642         130 ANVLLSEQGDVKL  142 (277)
T ss_pred             heEEEeCCCCEEE
Confidence            9999998887653


No 191
>KOG0607|consensus
Probab=99.74  E-value=1.5e-17  Score=112.07  Aligned_cols=90  Identities=30%  Similarity=0.513  Sum_probs=75.9

Q ss_pred             HHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      -+|++++.+++ |+||+++.++|.++...|+|||.+.||.+.+.+.+ ...+++..+..+...++.++.|+|.+||.|||
T Consensus       123 fREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~-~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRD  201 (463)
T KOG0607|consen  123 FREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQK-RKHFNEREASRVVKDIASALDFLHTKGIAHRD  201 (463)
T ss_pred             HHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHH-hhhccHHHHHHHHHHHHHHHHHHhhcCccccc
Confidence            34555555554 66666688889999999999999999999888766 46799999999999999999999999999999


Q ss_pred             CCCCCeEEecCC
Q psy15406        119 LKAGNVLLTMSG  130 (134)
Q Consensus       119 ik~~nill~~~~  130 (134)
                      +||+||+..+..
T Consensus       202 lKPENiLC~~pn  213 (463)
T KOG0607|consen  202 LKPENILCESPN  213 (463)
T ss_pred             CCccceeecCCC
Confidence            999999975443


No 192
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.74  E-value=2.3e-17  Score=111.11  Aligned_cols=95  Identities=27%  Similarity=0.463  Sum_probs=76.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+++++.++|+|++++++++..  ....+++|||++++++..++......+++.....++.|++.++.|+|+.|++|+
T Consensus        54 ~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~  133 (284)
T cd05038          54 EREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHR  133 (284)
T ss_pred             HHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            344445555555555557777765  557899999999999998886644468889999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       134 dl~p~nil~~~~~~~~l  150 (284)
T cd05038         134 DLAARNILVESEDLVKI  150 (284)
T ss_pred             CCCHHhEEEcCCCCEEE
Confidence            99999999998877654


No 193
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.74  E-value=2.9e-17  Score=112.55  Aligned_cols=96  Identities=31%  Similarity=0.487  Sum_probs=79.8

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...|+.+++.++|+|++++++.+......|++||++.++++.+++... ...+++.....++.|++.++.|+|+.|++|+
T Consensus        48 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~  127 (316)
T cd05574          48 VLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYR  127 (316)
T ss_pred             HHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            344555556666666666888888889999999999999999887543 2467889999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |+||+||+++.++.+++
T Consensus       128 dlkp~Nili~~~~~~~l  144 (316)
T cd05574         128 DLKPENILLHESGHIML  144 (316)
T ss_pred             CCChHHeEEcCCCCEEE
Confidence            99999999998887654


No 194
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.74  E-value=2.4e-17  Score=111.33  Aligned_cols=95  Identities=22%  Similarity=0.320  Sum_probs=80.0

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...++.+++.++|||++++++++. +...++++|++++|++.+++......+++.....++.|++.|+.|+|+.+++|+|
T Consensus        56 ~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~d  134 (279)
T cd05111          56 ITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRN  134 (279)
T ss_pred             HHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccc
Confidence            344555667777888888988765 4457789999999999998876556788999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+||+++.++.+++
T Consensus       135 lkp~nili~~~~~~kl  150 (279)
T cd05111         135 LAARNILLKSDSIVQI  150 (279)
T ss_pred             cCcceEEEcCCCcEEE
Confidence            9999999998887764


No 195
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.74  E-value=2.1e-17  Score=110.13  Aligned_cols=92  Identities=35%  Similarity=0.597  Sum_probs=74.4

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      |+.+++.++|+|++++++.+..+...|+++|+++++++..++... ..+++.....++.|++.++.|+|+.|++|+|++|
T Consensus        43 e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~  121 (265)
T cd05579          43 ERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKP  121 (265)
T ss_pred             HHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCH
Confidence            333444444444444666677788899999999999998887653 4788999999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.+++
T Consensus       122 ~nil~~~~~~~~l  134 (265)
T cd05579         122 DNILIDSNGHLKL  134 (265)
T ss_pred             HHeEEcCCCCEEE
Confidence            9999998887764


No 196
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.74  E-value=2.3e-17  Score=110.36  Aligned_cols=96  Identities=30%  Similarity=0.496  Sum_probs=84.6

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+.+++.++|+|++++.+.+......++++||++++++.+++.. ...+++..+..++.|++.++.|+|+.+++|+
T Consensus        48 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~  126 (265)
T cd06631          48 KLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVAYLHNNCVVHR  126 (265)
T ss_pred             HHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            455677788888888888899999999999999999999999988754 3567889999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+|++++.++.+++
T Consensus       127 dl~p~nil~~~~~~~~l  143 (265)
T cd06631         127 DIKGNNVMLMPNGIIKL  143 (265)
T ss_pred             CcCHHhEEECCCCeEEe
Confidence            99999999998887764


No 197
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.74  E-value=1.7e-17  Score=111.87  Aligned_cols=94  Identities=28%  Similarity=0.398  Sum_probs=81.1

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .|+.+++.++|||++++++.+...+..|++|||++++++..++.... ..+++.....++.|++.++.|+|+.|++|+||
T Consensus        42 ~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di  121 (277)
T cd05577          42 NEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDL  121 (277)
T ss_pred             HHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            45667777777777779999998899999999999999988876533 36889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       122 ~p~Nil~~~~~~~~l  136 (277)
T cd05577         122 KPENVLLDDHGNVRI  136 (277)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887654


No 198
>KOG4279|consensus
Probab=99.74  E-value=6.3e-18  Score=123.39  Aligned_cols=95  Identities=29%  Similarity=0.531  Sum_probs=84.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCC--CHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPL--TEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      -.||.+.++++|.||+++.+++..++++-|+||-.+||+|.+++....+++  .+.+.-.+..||+.|+.|+|++.|+||
T Consensus       620 hEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHR  699 (1226)
T KOG4279|consen  620 HEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHR  699 (1226)
T ss_pred             HHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeec
Confidence            346777777777777779999999999999999999999999998877777  788999999999999999999999999


Q ss_pred             CCCCCCeEEe-cCCeeeC
Q psy15406        118 DLKAGNVLLT-MSGGVKL  134 (134)
Q Consensus       118 dik~~nill~-~~~~~~i  134 (134)
                      |||-+|++++ +.|.+||
T Consensus       700 DIKGDNVLvNTySGvlKI  717 (1226)
T KOG4279|consen  700 DIKGDNVLVNTYSGVLKI  717 (1226)
T ss_pred             cccCCcEEEeeccceEEe
Confidence            9999999996 6687775


No 199
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.74  E-value=2.6e-17  Score=113.41  Aligned_cols=92  Identities=28%  Similarity=0.415  Sum_probs=77.0

Q ss_pred             HHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         42 WIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        42 ~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      |..++..+. |++++.+++++......|++|||+++|+|..++.. ...+++..+..++.|++.|+.|+|+.|++|||||
T Consensus        50 e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDik  128 (323)
T cd05615          50 EKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLK  128 (323)
T ss_pred             HHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            344444443 45555688888888999999999999999887654 4568999999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.++|
T Consensus       129 p~Nill~~~~~ikL  142 (323)
T cd05615         129 LDNVMLDSEGHIKI  142 (323)
T ss_pred             HHHeEECCCCCEEE
Confidence            99999999888764


No 200
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.74  E-value=3.3e-17  Score=109.66  Aligned_cols=96  Identities=31%  Similarity=0.553  Sum_probs=83.3

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+.+++.++|+|++++++.+......++++||++++++..++.. ...++...+..++.|++.++.|+|+.|++|+
T Consensus        52 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~  130 (267)
T cd06628          52 ALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGIIHR  130 (267)
T ss_pred             HHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence            345567777777788888899999999999999999999999888754 3567888899999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.++|
T Consensus       131 di~p~nil~~~~~~~~l  147 (267)
T cd06628         131 DIKGANILVDNKGGIKI  147 (267)
T ss_pred             cCCHHHEEEcCCCCEEe
Confidence            99999999998887764


No 201
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.74  E-value=4.2e-17  Score=108.41  Aligned_cols=93  Identities=30%  Similarity=0.504  Sum_probs=76.8

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+..+...++++||++++++..++.. ...+++.....++.|++.++.|+|+.|++|+|++
T Consensus        51 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  129 (258)
T cd06632          51 QEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIK  129 (258)
T ss_pred             HHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            344444445555555588888888899999999999999888754 3457888888999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.++|
T Consensus       130 ~~ni~~~~~~~~kl  143 (258)
T cd06632         130 GANILVDTNGVVKL  143 (258)
T ss_pred             HHHEEECCCCCEEE
Confidence            99999998887764


No 202
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.74  E-value=1.7e-17  Score=112.47  Aligned_cols=95  Identities=25%  Similarity=0.407  Sum_probs=81.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|++++.+++.+..+...|++|||++++++...+... ...+++.....++.|++.|+.|+|+.+++|+|
T Consensus        48 ~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~d  127 (285)
T cd05630          48 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRD  127 (285)
T ss_pred             HHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            34667777777777777999999999999999999999998776432 23588899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+||+++.++.+++
T Consensus       128 ikp~Nil~~~~~~~~l  143 (285)
T cd05630         128 LKPENILLDDHGHIRI  143 (285)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999998877653


No 203
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.74  E-value=2.6e-17  Score=113.78  Aligned_cols=96  Identities=27%  Similarity=0.445  Sum_probs=78.3

Q ss_pred             hHHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------CCCCHHHHHHHHHHH
Q psy15406         39 GKLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------KPLTEQQIRYICHYM  102 (134)
Q Consensus        39 ~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~i  102 (134)
                      ...|+.+++++ +|+|++++++.+..++..++++||+++|+|.+++....               ..++......++.|+
T Consensus        64 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  143 (334)
T cd05100          64 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQV  143 (334)
T ss_pred             HHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHH
Confidence            34455566666 56666669999988889999999999999998875421               235677788899999


Q ss_pred             HHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        103 CKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       103 ~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.|+.|+|.+|++|+|+||+||+++.++.++|
T Consensus       144 ~~al~~LH~~givH~dlkp~Nill~~~~~~kL  175 (334)
T cd05100         144 ARGMEYLASQKCIHRDLAARNVLVTEDNVMKI  175 (334)
T ss_pred             HHHHHHHHHCCeeccccccceEEEcCCCcEEE
Confidence            99999999999999999999999998887664


No 204
>KOG0196|consensus
Probab=99.74  E-value=1.6e-18  Score=127.15  Aligned_cols=102  Identities=25%  Similarity=0.415  Sum_probs=90.4

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL   86 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   86 (134)
                      ++++.+|+.|+.+|-+++||||++                          +-+.......++|++||+++|+|+.++.+.
T Consensus       671 ekqrrdFL~EAsIMGQFdHPNIIr--------------------------LEGVVTks~PvMIiTEyMENGsLDsFLR~~  724 (996)
T KOG0196|consen  671 EKQRRDFLSEASIMGQFDHPNIIR--------------------------LEGVVTKSKPVMIITEYMENGSLDSFLRQN  724 (996)
T ss_pred             HHHHhhhhhhhhhcccCCCCcEEE--------------------------EEEEEecCceeEEEhhhhhCCcHHHHHhhc
Confidence            556777888888888777777776                          777888888899999999999999999988


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         87 EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        87 ~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+.+...+...+++.|+.|++||.+.+++|||+.+.|||++.+-.+|+
T Consensus       725 DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKV  772 (996)
T KOG0196|consen  725 DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKV  772 (996)
T ss_pred             CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEe
Confidence            888888888899999999999999999999999999999999877774


No 205
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.74  E-value=1.9e-17  Score=112.81  Aligned_cols=93  Identities=38%  Similarity=0.701  Sum_probs=80.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+..+...|++|||++++++..++.+  ..+++.....++.+++.++.|+|+.|++|+|+
T Consensus        64 ~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL  141 (297)
T cd06656          64 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDI  141 (297)
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            3455666666777777799999999999999999999999988754  46788889999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       142 ~p~Nili~~~~~~~l  156 (297)
T cd06656         142 KSDNILLGMDGSVKL  156 (297)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887764


No 206
>KOG1035|consensus
Probab=99.74  E-value=5.4e-18  Score=128.79  Aligned_cols=69  Identities=25%  Similarity=0.476  Sum_probs=59.5

Q ss_pred             CEEEEEEeccCCCCHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         65 GKLWMLIEYCDGGAVDSIMLELEKPL-TEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        65 ~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ..+||-||||+..++.+++.. +... .....+.++++|+.|+.|+|+.|++|||+||.||++++++.+||
T Consensus       669 ~~LYIQMEyCE~~ll~~iI~~-N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKI  738 (1351)
T KOG1035|consen  669 LILYIQMEYCEKTLLRDIIRR-NHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKI  738 (1351)
T ss_pred             eEEEEEHhhhhhhHHHHHHHh-cccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeee
Confidence            357999999999777777654 3333 57888999999999999999999999999999999999998886


No 207
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.74  E-value=2.2e-17  Score=110.21  Aligned_cols=95  Identities=19%  Similarity=0.348  Sum_probs=81.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++++++.+..+...++++|+++++++.+++... ...++......++.+++.++.|+|+.+++|+|
T Consensus        49 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~d  128 (261)
T cd05072          49 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD  128 (261)
T ss_pred             HHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            45667777777777777999998888999999999999998887543 34567888888999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       129 l~p~nili~~~~~~~l  144 (261)
T cd05072         129 LRAANVLVSESLMCKI  144 (261)
T ss_pred             cchhhEEecCCCcEEE
Confidence            9999999998887754


No 208
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.74  E-value=2.4e-17  Score=115.07  Aligned_cols=94  Identities=19%  Similarity=0.380  Sum_probs=82.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+......+++++++.+ ++..++......+++..+..++.|++.|+.|+|..|++||||
T Consensus       105 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  183 (357)
T PHA03209        105 LIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDV  183 (357)
T ss_pred             HHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            4578888888999999999999999999999999965 676666655567899999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       184 kp~Nill~~~~~~kl  198 (357)
T PHA03209        184 KTENIFINDVDQVCI  198 (357)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887764


No 209
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.74  E-value=2.1e-17  Score=109.72  Aligned_cols=96  Identities=23%  Similarity=0.371  Sum_probs=83.2

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|+|++++++.+......++++|+++++++.+++......++......++.+++.++.|+|+++++|+|
T Consensus        39 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d  118 (251)
T cd05041          39 FLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD  118 (251)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence            44567777777788888899999999999999999999999888765445678888899999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       119 i~p~nili~~~~~~~l  134 (251)
T cd05041         119 LAARNCLVGENNVLKI  134 (251)
T ss_pred             cCcceEEEcCCCcEEE
Confidence            9999999998887764


No 210
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.74  E-value=3.1e-17  Score=109.16  Aligned_cols=95  Identities=22%  Similarity=0.428  Sum_probs=81.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.++++++|+|++++++.+......++++||++++++.+++......+++..+..++.+++.++.++|+.+++|+|+
T Consensus        47 ~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl  126 (256)
T cd05112          47 IEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDL  126 (256)
T ss_pred             HHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            34666677777777777999998888999999999999998887654456788889999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+|++++.++.++|
T Consensus       127 ~p~ni~i~~~~~~~l  141 (256)
T cd05112         127 AARNCLVGENQVVKV  141 (256)
T ss_pred             ccceEEEcCCCeEEE
Confidence            999999998877653


No 211
>KOG0662|consensus
Probab=99.74  E-value=3.8e-18  Score=106.93  Aligned_cols=93  Identities=33%  Similarity=0.565  Sum_probs=77.0

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      +||-+++.++|.||+.+++....+..+.+|+|+|.. .+..++.+.++.+..+.++.++.|++.|+.|+|++.+.|||+|
T Consensus        50 reicllkelkhknivrl~dvlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlk  128 (292)
T KOG0662|consen   50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLK  128 (292)
T ss_pred             HHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCC
Confidence            344444444444444477777778889999999966 7888888888889999999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+|++++.+|.+|+
T Consensus       129 pqnllin~ngelkl  142 (292)
T KOG0662|consen  129 PQNLLINRNGELKL  142 (292)
T ss_pred             cceEEeccCCcEEe
Confidence            99999999998874


No 212
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.74  E-value=2.9e-17  Score=111.59  Aligned_cols=93  Identities=27%  Similarity=0.484  Sum_probs=78.3

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+++++.++|+|++++++.+..+...+++|||+ ++++..++......+++.....++.|++.++.|+|+.|++|+|++
T Consensus        51 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~  129 (298)
T cd07841          51 REIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLK  129 (298)
T ss_pred             HHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence            4555666666666666888888888999999999 889988875533368899999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.++|
T Consensus       130 p~nill~~~~~~~l  143 (298)
T cd07841         130 PNNLLIASDGVLKL  143 (298)
T ss_pred             hhhEEEcCCCCEEE
Confidence            99999998887764


No 213
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.74  E-value=4.4e-17  Score=110.83  Aligned_cols=89  Identities=40%  Similarity=0.793  Sum_probs=73.3

Q ss_pred             HHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCC
Q psy15406         44 DILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGN  123 (134)
Q Consensus        44 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~n  123 (134)
                      .+++.++|+|++++++.+......+++|||++++++..+...  ..+++.....++.|++.++.|+|+.|++|+|++|+|
T Consensus        69 ~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~N  146 (292)
T cd06657          69 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDS  146 (292)
T ss_pred             HHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            333334444444488888888999999999999999887543  467888899999999999999999999999999999


Q ss_pred             eEEecCCeeeC
Q psy15406        124 VLLTMSGGVKL  134 (134)
Q Consensus       124 ill~~~~~~~i  134 (134)
                      |+++.++.+++
T Consensus       147 ilv~~~~~~~l  157 (292)
T cd06657         147 ILLTHDGRVKL  157 (292)
T ss_pred             EEECCCCCEEE
Confidence            99998887654


No 214
>KOG1026|consensus
Probab=99.74  E-value=1.4e-17  Score=122.71  Aligned_cols=100  Identities=28%  Similarity=0.451  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-   87 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-   87 (134)
                      ...+|.||+++++.|+|||||+                          +++.|..+..+|+++||+..|+|..++.... 
T Consensus       532 ~~~dF~REaeLla~l~H~nIVr--------------------------LlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP  585 (774)
T KOG1026|consen  532 ARQDFRREAELLAELQHPNIVR--------------------------LLGVCREGDPLCMVFEYMDHGDLHEFLRARSP  585 (774)
T ss_pred             HHHHHHHHHHHHHhccCCCeEE--------------------------EEEEEccCCeeEEEEEecccccHHHHHHhhCC
Confidence            4456666666666666666655                          9999999999999999999999999886432 


Q ss_pred             --------CC----CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         88 --------KP----LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        88 --------~~----~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                              ..    ++..+.+.++.||+.|+.||.++..+|||+..+|.+++++-.+||
T Consensus       586 ~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKI  644 (774)
T KOG1026|consen  586 KADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKI  644 (774)
T ss_pred             ccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEe
Confidence                    12    677888999999999999999999999999999999999988886


No 215
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.74  E-value=3e-17  Score=110.95  Aligned_cols=98  Identities=38%  Similarity=0.660  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh--CC
Q psy15406         11 SDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL--EK   88 (134)
Q Consensus        11 ~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~   88 (134)
                      ..+.+|++++++++||||++                          +++.+..++..|++|||++++++..++...  ..
T Consensus        44 ~~~~~e~~~l~~~~~~~i~~--------------------------~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~   97 (286)
T cd06622          44 NQIIMELDILHKAVSPYIVD--------------------------FYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATE   97 (286)
T ss_pred             HHHHHHHHHHHhcCCCcHHh--------------------------hhhheecCCeEEEEEeecCCCCHHHHHHhccccC
Confidence            45566666666666666666                          666677778899999999999998876542  23


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCCeEEecCCeeeC
Q psy15406         89 PLTEQQIRYICHYMCKALQFLHT-HRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        89 ~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+++.....++.+++.++.|+|. .+++|+||+|+||+++.++.+++
T Consensus        98 ~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l  144 (286)
T cd06622          98 GIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKL  144 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEE
Confidence            68899999999999999999997 59999999999999998887764


No 216
>KOG1094|consensus
Probab=99.74  E-value=2.8e-18  Score=122.79  Aligned_cols=100  Identities=30%  Similarity=0.487  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK   88 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~   88 (134)
                      .+++|.+|+++|.+|+||||+.                          +.+.|..+..+++++||+++|+|.+++.....
T Consensus       578 ~r~~F~kEIkiLsqLkhPNIve--------------------------LvGVC~~DePicmI~EYmEnGDLnqFl~ahea  631 (807)
T KOG1094|consen  578 ARNDFLKEIKILSRLKHPNIVE--------------------------LLGVCVQDDPLCMITEYMENGDLNQFLSAHEL  631 (807)
T ss_pred             HHHHHHHHHHHHhccCCCCeeE--------------------------EEeeeecCCchHHHHHHHhcCcHHHHHHhccC
Confidence            4567777777777777776666                          89999999999999999999999998876432


Q ss_pred             C-CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         89 P-LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        89 ~-~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      + ........++.|++.|++|+.+..++|||+.+.|++++.++++||
T Consensus       632 pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKi  678 (807)
T KOG1094|consen  632 PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKI  678 (807)
T ss_pred             cccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEe
Confidence            2 355666679999999999999999999999999999999999886


No 217
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.73  E-value=2.6e-17  Score=112.09  Aligned_cols=92  Identities=39%  Similarity=0.698  Sum_probs=79.2

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++.+++.+......|+++||++++++..++..  ..+++.....++.+++.++.|+|+.|++|+|++
T Consensus        65 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~  142 (296)
T cd06655          65 NEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHANQVIHRDIK  142 (296)
T ss_pred             HHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            455566666666777799999888999999999999999887754  467889999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.++|
T Consensus       143 p~Nili~~~~~~kl  156 (296)
T cd06655         143 SDNVLLGMDGSVKL  156 (296)
T ss_pred             HHHEEECCCCCEEE
Confidence            99999998887764


No 218
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.73  E-value=3.1e-17  Score=111.08  Aligned_cols=94  Identities=22%  Similarity=0.363  Sum_probs=77.0

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------------------CCCCHHHHHHHH
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------------------KPLTEQQIRYIC   99 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------------~~~~~~~~~~~~   99 (134)
                      .|+.+++.++|+|++++++.+..+...++++||++++++..++....                     ..+++.....++
T Consensus        57 ~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  136 (288)
T cd05050          57 REAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIA  136 (288)
T ss_pred             HHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHH
Confidence            45555555666666668998888889999999999999988875421                     135677888999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        100 HYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       100 ~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+++.++.|+|+.+++|+|++|+|++++.++.+++
T Consensus       137 ~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l  171 (288)
T cd05050         137 KQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKI  171 (288)
T ss_pred             HHHHHHHHHHHhCCeecccccHhheEecCCCceEE
Confidence            99999999999999999999999999998887654


No 219
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.73  E-value=2.7e-17  Score=110.58  Aligned_cols=95  Identities=19%  Similarity=0.289  Sum_probs=80.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------KPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      ..|+.+++.++|+|++++++.+......+++|||+++++|.+++....         ..+++..+..++.|++.++.|+|
T Consensus        57 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  136 (277)
T cd05032          57 LNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA  136 (277)
T ss_pred             HHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            446677777788888889999999999999999999999998875421         13567788889999999999999


Q ss_pred             HCCCccCCCCCCCeEEecCCeeeC
Q psy15406        111 THRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.+++|+|++|+||+++.++.+++
T Consensus       137 ~~~i~H~di~p~nill~~~~~~kl  160 (277)
T cd05032         137 AKKFVHRDLAARNCMVAEDLTVKI  160 (277)
T ss_pred             hCCccccccChheEEEcCCCCEEE
Confidence            999999999999999999888764


No 220
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.73  E-value=3.8e-17  Score=109.55  Aligned_cols=94  Identities=22%  Similarity=0.327  Sum_probs=73.2

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCC------EEEEEEeccCCCCHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHH
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNG------KLWMLIEYCDGGAVDSIMLEL-----EKPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      .|+.+++.++|+|++++++.+....      ..++++||++++++...+...     ...+++.....++.|++.|+.|+
T Consensus        50 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~l  129 (273)
T cd05035          50 SEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYL  129 (273)
T ss_pred             HHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence            3444444555555555777665433      379999999999998876432     13578888999999999999999


Q ss_pred             HHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        110 HTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       110 h~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |+.+++|+|+||+||+++.++.+++
T Consensus       130 H~~~i~H~dlkp~Nil~~~~~~~kl  154 (273)
T cd05035         130 SNRNFIHRDLAARNCMLREDMTVCV  154 (273)
T ss_pred             HhCCeeccccchheEEECCCCeEEE
Confidence            9999999999999999998887764


No 221
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.73  E-value=2.8e-17  Score=109.66  Aligned_cols=95  Identities=24%  Similarity=0.388  Sum_probs=81.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++++++.+..+...+++||+++++++.+++.+.. ..++...+..++.+++.++.|+|+++++|+|
T Consensus        49 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~d  128 (261)
T cd05034          49 LQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRD  128 (261)
T ss_pred             HHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            345666677777777779988888888999999999999998876532 4578899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       129 i~p~nili~~~~~~~l  144 (261)
T cd05034         129 LAARNILVGENLVCKI  144 (261)
T ss_pred             cchheEEEcCCCCEEE
Confidence            9999999998887764


No 222
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.73  E-value=3e-17  Score=111.19  Aligned_cols=94  Identities=32%  Similarity=0.484  Sum_probs=81.7

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+++++.++|+|++++++.+..+...+++|||+++ ++.+++......+++..+..++.|++.|+.|+|+.+++|+|+
T Consensus        51 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl  129 (291)
T cd07844          51 IREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDL  129 (291)
T ss_pred             HHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccC
Confidence            3467777777888888899999999999999999985 787777654556789999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       130 ~p~nil~~~~~~~kl  144 (291)
T cd07844         130 KPQNLLISERGELKL  144 (291)
T ss_pred             CHHHEEEcCCCCEEE
Confidence            999999999887764


No 223
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.73  E-value=4.2e-17  Score=108.95  Aligned_cols=92  Identities=39%  Similarity=0.759  Sum_probs=75.1

Q ss_pred             HHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCC
Q psy15406         43 IDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHRDLKA  121 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dik~  121 (134)
                      +++++.++|+|++++++.+..+...++++|++++++|.+++......+++.....++.|++.++.|+|+ .|++|+|++|
T Consensus        50 ~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~  129 (265)
T cd06605          50 LDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKP  129 (265)
T ss_pred             HHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCH
Confidence            333333344444447777888889999999999999998876544678899999999999999999999 9999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.+++
T Consensus       130 ~ni~~~~~~~~~l  142 (265)
T cd06605         130 SNILVNSRGQIKL  142 (265)
T ss_pred             HHEEECCCCCEEE
Confidence            9999998887654


No 224
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.73  E-value=3.8e-17  Score=108.89  Aligned_cols=95  Identities=24%  Similarity=0.437  Sum_probs=78.2

Q ss_pred             HHHHHHHhhCCCCCccccceeee-eCCEEEEEEeccCCCCHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFF-TNGKLWMLIEYCDGGAVDSIMLELEK-PLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+.+++.++|+|++++++.+. .+...++++||++++++.+++..... .+++.....++.+++.++.|+|++|++|+
T Consensus        47 ~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~  126 (256)
T cd05082          47 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHR  126 (256)
T ss_pred             HHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence            44566666667777777888654 45678999999999999988765433 36888889999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       127 dlkp~nil~~~~~~~kl  143 (256)
T cd05082         127 DLAARNVLVSEDNVAKV  143 (256)
T ss_pred             ccchheEEEcCCCcEEe
Confidence            99999999998887764


No 225
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.73  E-value=4.5e-17  Score=109.77  Aligned_cols=93  Identities=37%  Similarity=0.692  Sum_probs=79.7

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.+.|+|++++.+.+..+...|++|||++++++.+++..  ..+++.....++.+++.++.|+|+.+++|+|+
T Consensus        50 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl  127 (277)
T cd06640          50 QQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDI  127 (277)
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCC
Confidence            4455666666677777799999999999999999999999887753  56788888999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       128 ~p~Nil~~~~~~~~l  142 (277)
T cd06640         128 KAANVLLSEQGDVKL  142 (277)
T ss_pred             ChhhEEEcCCCCEEE
Confidence            999999998877653


No 226
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.73  E-value=3.2e-17  Score=109.68  Aligned_cols=90  Identities=23%  Similarity=0.494  Sum_probs=75.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+......++++||++++++.+++.. ...+++.....++.|++.|+.|+|++|++|+||
T Consensus        51 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i  129 (268)
T cd06630          51 RKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDV  129 (268)
T ss_pred             HHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            3445555555555555588888888899999999999999988754 356788999999999999999999999999999


Q ss_pred             CCCCeEEecCC
Q psy15406        120 KAGNVLLTMSG  130 (134)
Q Consensus       120 k~~nill~~~~  130 (134)
                      +|+||+++.++
T Consensus       130 ~~~nil~~~~~  140 (268)
T cd06630         130 KGANLLIDSTG  140 (268)
T ss_pred             CHHHEEEcCCC
Confidence            99999997665


No 227
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.73  E-value=4.6e-17  Score=110.33  Aligned_cols=95  Identities=19%  Similarity=0.304  Sum_probs=79.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE---------KPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      ..|+.+++.++|+|++++++.+......+++|||+++|+|.+++....         ..........++.|++.++.|+|
T Consensus        57 ~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH  136 (288)
T cd05061          57 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN  136 (288)
T ss_pred             HHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            345667777777777789999988889999999999999998886421         12345677889999999999999


Q ss_pred             HCCCccCCCCCCCeEEecCCeeeC
Q psy15406        111 THRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +++++|+|+||+||+++.++.+++
T Consensus       137 ~~~i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061         137 AKKFVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             hCCCcCCCCChheEEEcCCCcEEE
Confidence            999999999999999998887654


No 228
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.73  E-value=7.7e-17  Score=107.13  Aligned_cols=97  Identities=42%  Similarity=0.725  Sum_probs=85.2

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+++++.++|+|++++++.+..+...|+++|+++++++.+++......+++..+..++.+++.++.|+|+.+++|+
T Consensus        44 ~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~  123 (256)
T cd06612          44 EIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHR  123 (256)
T ss_pred             HHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence            44556777777788888889999999999999999999999998886655678999999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       124 dl~~~ni~~~~~~~~~l  140 (256)
T cd06612         124 DIKAGNILLNEEGQAKL  140 (256)
T ss_pred             CCCcceEEECCCCcEEE
Confidence            99999999998887764


No 229
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.73  E-value=5.6e-17  Score=109.87  Aligned_cols=92  Identities=40%  Similarity=0.764  Sum_probs=78.3

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+......++++||++++++.+.+..  ..++......++.|++.++.|+|+.|++|+|++
T Consensus        65 ~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~  142 (285)
T cd06648          65 NEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIK  142 (285)
T ss_pred             HHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            345555555666666699998888999999999999999988765  568888999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.+++
T Consensus       143 p~Nil~~~~~~~~l  156 (285)
T cd06648         143 SDSILLTSDGRVKL  156 (285)
T ss_pred             hhhEEEcCCCcEEE
Confidence            99999998887764


No 230
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.73  E-value=4.1e-17  Score=108.85  Aligned_cols=94  Identities=21%  Similarity=0.336  Sum_probs=77.1

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|+|++++++.+. ....+++||+++++++.+++.. ...+++.....++.|++.++.|+|+.|++|+|
T Consensus        43 ~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d  120 (257)
T cd05116          43 LLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRD  120 (257)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            344566666666677776887765 4457899999999999888754 35688999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+|++++.++.+++
T Consensus       121 lkp~nill~~~~~~kl  136 (257)
T cd05116         121 LAARNVLLVTQHYAKI  136 (257)
T ss_pred             cchhhEEEcCCCeEEE
Confidence            9999999998887654


No 231
>KOG4717|consensus
Probab=99.73  E-value=2.4e-17  Score=117.05  Aligned_cols=99  Identities=31%  Similarity=0.441  Sum_probs=88.0

Q ss_pred             HhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         36 FTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        36 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      ....-+|+.+|+-++||||+.+|....++..+|+++|+-.+|.+++++.+....+.+..+..++.||+.++.|+|+..++
T Consensus        61 t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVV  140 (864)
T KOG4717|consen   61 TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVV  140 (864)
T ss_pred             hhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            34456678888888888888899999999999999999999999999988888899999999999999999999999999


Q ss_pred             cCCCCCCCeEEecC-CeeeC
Q psy15406        116 HRDLKAGNVLLTMS-GGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~-~~~~i  134 (134)
                      |||+||+|+++.+. |-+|+
T Consensus       141 HRDLKPENVVFFEKlGlVKL  160 (864)
T KOG4717|consen  141 HRDLKPENVVFFEKLGLVKL  160 (864)
T ss_pred             cccCCcceeEEeeecCceEe
Confidence            99999999998755 66653


No 232
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.73  E-value=5.3e-17  Score=107.86  Aligned_cols=95  Identities=24%  Similarity=0.361  Sum_probs=79.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKP-LTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++++++.+...+..+++||+++++++..++...... +++.....++.|++.++.++|+.|++|+|
T Consensus        49 ~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~d  128 (258)
T smart00219       49 LREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRD  128 (258)
T ss_pred             HHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecc
Confidence            34455555556666666999999889999999999999999887653333 89999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       129 l~~~nil~~~~~~~~l  144 (258)
T smart00219      129 LAARNCLVGENLVVKI  144 (258)
T ss_pred             cccceEEEccCCeEEE
Confidence            9999999998887653


No 233
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.73  E-value=2.5e-17  Score=115.44  Aligned_cols=93  Identities=20%  Similarity=0.460  Sum_probs=72.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCC-----EEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNG-----KLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      .+|+.+++.++|+|++++++.+....     ..|+++||+.+ ++...+.. ...++...+..++.|++.|+.|+|+.|+
T Consensus        47 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~i  124 (372)
T cd07853          47 FRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGI  124 (372)
T ss_pred             HHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeecccc-CHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            34455555555555555666666554     68999999975 56665533 4578899999999999999999999999


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +||||||+||+++.++.++|
T Consensus       125 vH~dlkp~Nili~~~~~~kL  144 (372)
T cd07853         125 LHRDIKPGNLLVNSNCVLKI  144 (372)
T ss_pred             eCCCCChHHEEECCCCCEEe
Confidence            99999999999999888764


No 234
>KOG0577|consensus
Probab=99.73  E-value=2.4e-18  Score=123.53  Aligned_cols=92  Identities=36%  Similarity=0.663  Sum_probs=77.1

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      |+..++++.|||.+.+.+||..+...|+|||||-| +..+++.-...++.+..+..+..+.+.|+.|+|+.+.+|||||+
T Consensus        76 EVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKA  154 (948)
T KOG0577|consen   76 EVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKA  154 (948)
T ss_pred             HHHHHHhccCCCcccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccc
Confidence            44455555555555588899999999999999966 66666655557888999999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||++.+.|.+|+
T Consensus       155 GNILLse~g~VKL  167 (948)
T KOG0577|consen  155 GNILLSEPGLVKL  167 (948)
T ss_pred             cceEecCCCeeee
Confidence            9999999998875


No 235
>KOG0612|consensus
Probab=99.73  E-value=2.1e-17  Score=125.03  Aligned_cols=93  Identities=34%  Similarity=0.479  Sum_probs=84.3

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|-++|...+.+=|++++-.|+++.++|+||+|++||++-.++.+.. .+++..+++|...++.|+.-+|+.|++|||+|
T Consensus       124 EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiK  202 (1317)
T KOG0612|consen  124 EERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIK  202 (1317)
T ss_pred             HHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCC
Confidence            45677777777778888889999999999999999999999987754 79999999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+|++++..|.+|+
T Consensus       203 PDNvLld~~GHikL  216 (1317)
T KOG0612|consen  203 PDNVLLDKSGHIKL  216 (1317)
T ss_pred             cceeEecccCcEee
Confidence            99999999999875


No 236
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.73  E-value=2.8e-17  Score=122.67  Aligned_cols=95  Identities=32%  Similarity=0.453  Sum_probs=82.7

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|+|+++++..+......|++|||+.+++|..++.. ...+++..++.++.|++.|+.|+|..+++|||
T Consensus        51 ~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrD  129 (669)
T cd05610          51 VQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGIIHRD  129 (669)
T ss_pred             HHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            34566677777788888899999999999999999999999988754 35678888999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       130 LKP~NILl~~~g~vkL  145 (669)
T cd05610         130 LKPDNMLISNEGHIKL  145 (669)
T ss_pred             ccHHHEEEcCCCCEEE
Confidence            9999999998887764


No 237
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.73  E-value=2.5e-17  Score=111.18  Aligned_cols=94  Identities=26%  Similarity=0.458  Sum_probs=79.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE--KPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+.+++.++|+|++++++.+..+...|++|||++ +++..++....  ..+++..+..++.|++.|+.|+|+.|++|+
T Consensus        47 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~  125 (285)
T cd07861          47 IREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHR  125 (285)
T ss_pred             HHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            446677777777777779999999999999999997 46766654322  457899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.+|.++|
T Consensus       126 dl~p~nil~~~~~~~~l  142 (285)
T cd07861         126 DLKPQNLLIDNKGVIKL  142 (285)
T ss_pred             CCCHHHEEEcCCCcEEE
Confidence            99999999999888764


No 238
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.73  E-value=3.4e-17  Score=110.53  Aligned_cols=89  Identities=31%  Similarity=0.619  Sum_probs=74.6

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.++++++|||++++++.+..+...+++|||++++++...     ..+++..+..++.|++.++.|+|+.|++|+|+|
T Consensus        48 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  122 (279)
T cd06619          48 SELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVK  122 (279)
T ss_pred             HHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCC
Confidence            345555555666666699999999999999999999988643     346788888999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+|++++.++.+++
T Consensus       123 p~Nill~~~~~~~l  136 (279)
T cd06619         123 PSNMLVNTRGQVKL  136 (279)
T ss_pred             HHHEEECCCCCEEE
Confidence            99999998887764


No 239
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.73  E-value=4.7e-17  Score=109.17  Aligned_cols=92  Identities=20%  Similarity=0.319  Sum_probs=69.1

Q ss_pred             HHHHhhCCCCCccccceeeee------CCEEEEEEeccCCCCHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHH
Q psy15406         43 IDILSDCKHENIVQLYEAFFT------NGKLWMLIEYCDGGAVDSIMLEL-----EKPLTEQQIRYICHYMCKALQFLHT  111 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lh~  111 (134)
                      +.+++.++|+|++++++.+..      ....++++||+++|++..++...     ...+++.....++.|++.|+.|+|+
T Consensus        51 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  130 (272)
T cd05075          51 AVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS  130 (272)
T ss_pred             HHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            334444444444447665532      12468999999999998776421     2346888899999999999999999


Q ss_pred             CCCccCCCCCCCeEEecCCeeeC
Q psy15406        112 HRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++++|+|+||+||+++.++.++|
T Consensus       131 ~~i~H~dlkp~Nil~~~~~~~kl  153 (272)
T cd05075         131 KSFIHRDLAARNCMLNENMNVCV  153 (272)
T ss_pred             CCeeccccchhheEEcCCCCEEE
Confidence            99999999999999998887764


No 240
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.73  E-value=3.6e-17  Score=109.23  Aligned_cols=95  Identities=36%  Similarity=0.580  Sum_probs=80.6

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|+|++++.+.+..+...++++||+++++|.+++.. ...++......++.|++.++.|+|+++++|+|
T Consensus        40 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~d  118 (262)
T cd05572          40 IFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD-RGLFDEYTARFYIACVVLAFEYLHNRGIIYRD  118 (262)
T ss_pred             HHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            34455666666667777799988888999999999999999988754 35678889999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       119 l~~~nilv~~~~~~~l  134 (262)
T cd05572         119 LKPENLLLDSNGYVKL  134 (262)
T ss_pred             CCHHHEEEcCCCCEEE
Confidence            9999999998887764


No 241
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.73  E-value=6.2e-17  Score=108.14  Aligned_cols=94  Identities=17%  Similarity=0.319  Sum_probs=76.5

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++++++.+.. ...+++|||++++++.+++... ....+...+..++.+++.++.|+|+.|++|+|
T Consensus        49 ~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d  127 (260)
T cd05073          49 LAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD  127 (260)
T ss_pred             HHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            345556666666666668887776 6789999999999998887652 23467788888999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |+|+|++++.++.+++
T Consensus       128 l~p~ni~i~~~~~~~l  143 (260)
T cd05073         128 LRAANILVSASLVCKI  143 (260)
T ss_pred             cCcceEEEcCCCcEEE
Confidence            9999999998887764


No 242
>KOG4645|consensus
Probab=99.73  E-value=1.9e-18  Score=131.91  Aligned_cols=97  Identities=29%  Similarity=0.555  Sum_probs=86.7

Q ss_pred             HhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         36 FTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        36 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      ...-..|..++..++|||++.+|+.=.+...++|+||||.+|+|.++.. .++..++...+.+..|++.|+.|||..||+
T Consensus      1278 ~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~~gIV 1356 (1509)
T KOG4645|consen 1278 FKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHEHGIV 1356 (1509)
T ss_pred             CcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHhcCce
Confidence            3455778888889999999999999999999999999999999999864 455678888999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeee
Q psy15406        116 HRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus       116 h~dik~~nill~~~~~~~  133 (134)
                      |||+||.||+++.+|.+|
T Consensus      1357 HRDIK~aNI~Ld~~g~iK 1374 (1509)
T KOG4645|consen 1357 HRDIKPANILLDFNGLIK 1374 (1509)
T ss_pred             ecCCCccceeeecCCcEE
Confidence            999999999999999776


No 243
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.72  E-value=4.4e-17  Score=109.95  Aligned_cols=94  Identities=27%  Similarity=0.557  Sum_probs=81.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.++++++|+|++++++.+..+...++++|++ ++++...+......+++..+..++.|++.++.|+|+.|++|+|+
T Consensus        47 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  125 (286)
T cd07832          47 LREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDL  125 (286)
T ss_pred             HHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCc
Confidence            44566666667777777999999999999999999 88999887665567899999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       126 ~p~ni~~~~~~~~~l  140 (286)
T cd07832         126 KPANLLISADGVLKI  140 (286)
T ss_pred             CHHHEEEcCCCcEEE
Confidence            999999998877653


No 244
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.72  E-value=4.1e-17  Score=112.36  Aligned_cols=92  Identities=28%  Similarity=0.434  Sum_probs=79.5

Q ss_pred             HHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         42 WIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        42 ~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      |..++..+ +|++++.+++++......|++|||+++|++...+.. ...+++..+..++.|++.|+.|+|+.|++|||+|
T Consensus        50 e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  128 (323)
T cd05616          50 EKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLK  128 (323)
T ss_pred             HHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCC
Confidence            44555555 477888899999999999999999999999877654 3568899999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.++|
T Consensus       129 p~Nill~~~~~~kL  142 (323)
T cd05616         129 LDNVMLDSEGHIKI  142 (323)
T ss_pred             HHHeEECCCCcEEE
Confidence            99999999988764


No 245
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.72  E-value=6.2e-17  Score=108.42  Aligned_cols=92  Identities=28%  Similarity=0.413  Sum_probs=79.0

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHHC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL------EKPLTEQQIRYICHYMCKALQFLHTH  112 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lh~~  112 (134)
                      ...|+.+++.++|||++++++.+......+++||+++++++.+++...      ...+++..+..++.+++.++.|+|+.
T Consensus        46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  125 (269)
T cd05044          46 FLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM  125 (269)
T ss_pred             HHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC
Confidence            345777888888888888999999888999999999999998887542      12367788889999999999999999


Q ss_pred             CCccCCCCCCCeEEecCC
Q psy15406        113 RVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus       113 ~i~h~dik~~nill~~~~  130 (134)
                      +++|+|++|+||+++.++
T Consensus       126 ~i~H~dl~p~nil~~~~~  143 (269)
T cd05044         126 HFIHRDLAARNCLVSEKG  143 (269)
T ss_pred             CcccCCCChheEEEecCC
Confidence            999999999999998765


No 246
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.72  E-value=5.6e-17  Score=107.93  Aligned_cols=96  Identities=35%  Similarity=0.636  Sum_probs=80.8

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...|+.+++.++|+|++++.+.+...+..++++||++++++...+... ...+++.....++.|++.++.|+|++|++|+
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~  125 (256)
T cd08218          46 SRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHR  125 (256)
T ss_pred             HHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence            345566666677777777999999999999999999999998877543 2357888899999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+|++++.++.+++
T Consensus       126 ~l~~~nil~~~~~~~~l  142 (256)
T cd08218         126 DIKSQNIFLTKDGTIKL  142 (256)
T ss_pred             CCCHHHEEEcCCCCEEE
Confidence            99999999988877653


No 247
>KOG2345|consensus
Probab=99.72  E-value=1.4e-16  Score=103.84  Aligned_cols=111  Identities=25%  Similarity=0.390  Sum_probs=92.9

Q ss_pred             CcccchhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHH
Q psy15406          2 CALEGEEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDS   81 (134)
Q Consensus         2 ~~~~~~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~   81 (134)
                      +.+.+.++.+..++|++..++++|||+.++++..+...+                     ......|+++.|...|++.+
T Consensus        54 I~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~---------------------D~~~~~yll~Pyy~~Gsl~d  112 (302)
T KOG2345|consen   54 ILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK---------------------DGKHEAYLLLPYYKRGSLLD  112 (302)
T ss_pred             eeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc---------------------cCceeEEEEeehhccccHHH
Confidence            456677889999999999999999999998876544322                     13456999999999999988


Q ss_pred             HHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCCeEEecCCeee
Q psy15406         82 IMLEL---EKPLTEQQIRYICHYMCKALQFLHTHR--VIHRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus        82 ~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dik~~nill~~~~~~~  133 (134)
                      .+...   +..+++...+.++.+++.|+.++|...  +.|||+||+||++.+++.++
T Consensus       113 ~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~v  169 (302)
T KOG2345|consen  113 EIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPV  169 (302)
T ss_pred             HHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceE
Confidence            77543   235799999999999999999999998  99999999999998877664


No 248
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.72  E-value=9.4e-17  Score=106.83  Aligned_cols=96  Identities=34%  Similarity=0.541  Sum_probs=78.5

Q ss_pred             hHHHHHHHhhCCCCCccccceeeee-CCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFT-NGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ...|+.++++++|+|++++.+.+.. +...|+++|+++++++.+++... ...+++..+..++.+++.++.++|+.|++|
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H  125 (257)
T cd08223          46 AEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILH  125 (257)
T ss_pred             HHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            3455666666677777778777664 45689999999999998887653 345789999999999999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      +|++|+||+++.++.+++
T Consensus       126 ~di~p~nil~~~~~~~~l  143 (257)
T cd08223         126 RDLKTQNVFLTRTNIIKV  143 (257)
T ss_pred             cCCCchhEEEecCCcEEE
Confidence            999999999998877653


No 249
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.72  E-value=6.2e-17  Score=108.35  Aligned_cols=94  Identities=30%  Similarity=0.482  Sum_probs=76.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+.+++.++|+|++++++++..  ...++++||+++++++.+++.. ...+++.....++.+++.++.|+|+.+++|+
T Consensus        52 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~  130 (265)
T cd06652          52 ECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQILEGVSYLHSNMIVHR  130 (265)
T ss_pred             HHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence            345555555666666668887765  3568899999999999988754 3457888889999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.++|
T Consensus       131 dl~p~nil~~~~~~~~l  147 (265)
T cd06652         131 DIKGANILRDSVGNVKL  147 (265)
T ss_pred             CCCHHHEEecCCCCEEE
Confidence            99999999998887764


No 250
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.72  E-value=1.3e-16  Score=107.03  Aligned_cols=96  Identities=32%  Similarity=0.489  Sum_probs=84.5

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+.+++.++|+|++++++.+......++++||++++++..++... ..++...+..++.|++.++.|+|+.+++|+
T Consensus        54 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~  132 (272)
T cd06629          54 ALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHR  132 (272)
T ss_pred             HHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeec
Confidence            4456778888888888888999999999999999999999999887653 567888889999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       133 dl~~~nil~~~~~~~~l  149 (272)
T cd06629         133 DLKADNLLVDADGICKI  149 (272)
T ss_pred             CCChhhEEEcCCCeEEE
Confidence            99999999998887764


No 251
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.72  E-value=8.9e-17  Score=108.37  Aligned_cols=94  Identities=20%  Similarity=0.300  Sum_probs=77.5

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++.+++.+.. ...+++++++++|++.+.+......+++.....++.|++.|+.|+|+++++|+|+
T Consensus        57 ~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dl  135 (279)
T cd05109          57 LDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDL  135 (279)
T ss_pred             HHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence            345556666667777778887764 4477999999999998887654456889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.++|
T Consensus       136 kp~Nil~~~~~~~kL  150 (279)
T cd05109         136 AARNVLVKSPNHVKI  150 (279)
T ss_pred             ccceEEEcCCCcEEE
Confidence            999999988877664


No 252
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.72  E-value=1.3e-16  Score=106.52  Aligned_cols=94  Identities=31%  Similarity=0.611  Sum_probs=77.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+......++++||++++++.+++.. ...+++.....++.+++.++.|+|+.|++|+|+
T Consensus        47 ~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl  125 (264)
T cd06626          47 ADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDI  125 (264)
T ss_pred             HHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            3444445555555555588888888899999999999999988754 345788888999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.++|
T Consensus       126 ~~~nil~~~~~~~kl  140 (264)
T cd06626         126 KPANIFLDHNGVIKL  140 (264)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887764


No 253
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.72  E-value=9.5e-17  Score=106.85  Aligned_cols=95  Identities=21%  Similarity=0.395  Sum_probs=78.8

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...|+.+++.++|+|++++++.+...+ .+++|||++++++.+++.... ..++......++.|++.++.|+|+.|++|+
T Consensus        46 ~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~  124 (254)
T cd05083          46 FLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHR  124 (254)
T ss_pred             HHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            345666777777777777888876544 789999999999998876543 346888888999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+|++++.++.+++
T Consensus       125 dl~p~nili~~~~~~kl  141 (254)
T cd05083         125 DLAARNILVSEDGVAKV  141 (254)
T ss_pred             ccCcceEEEcCCCcEEE
Confidence            99999999998887764


No 254
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.72  E-value=8e-17  Score=109.13  Aligned_cols=95  Identities=28%  Similarity=0.430  Sum_probs=81.4

Q ss_pred             hHHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...|+.+++.+ +|+|++.+++.+..+...|+++||++++++...+.. ...+++..+..++.|++.++.|+|+.|++|+
T Consensus        51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~  129 (290)
T cd05613          51 TRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYR  129 (290)
T ss_pred             HHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            34566677777 477777799999988999999999999999887754 3567888888899999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.++|
T Consensus       130 dl~p~nil~~~~~~~kl  146 (290)
T cd05613         130 DIKLENILLDSNGHVVL  146 (290)
T ss_pred             CCCHHHeEECCCCCEEE
Confidence            99999999998887764


No 255
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.72  E-value=6.8e-17  Score=110.46  Aligned_cols=95  Identities=38%  Similarity=0.674  Sum_probs=79.6

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.+++.++|||++++.+.+..+...|+++||+.+ ++...+......+++..+..++.|++.++.|+|+.|++|+|
T Consensus        62 ~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~d  140 (307)
T cd06607          62 IIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRD  140 (307)
T ss_pred             HHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            34566677777777777799999999999999999975 56555544445688999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.++|
T Consensus       141 l~p~nIl~~~~~~~kL  156 (307)
T cd06607         141 IKAGNILLTEPGTVKL  156 (307)
T ss_pred             CCcccEEECCCCCEEE
Confidence            9999999998887764


No 256
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.72  E-value=7.8e-17  Score=107.65  Aligned_cols=94  Identities=21%  Similarity=0.369  Sum_probs=77.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++++++.+. ....+++|||++++++.+++.... ..+++..+..++.+++.++.|+|+.|++|+|
T Consensus        49 ~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d  127 (260)
T cd05069          49 LQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRD  127 (260)
T ss_pred             HHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            34666677777777777887764 456789999999999988876532 3467888899999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+|+++++++.++|
T Consensus       128 l~~~Nill~~~~~~~l  143 (260)
T cd05069         128 LRAANILVGDNLVCKI  143 (260)
T ss_pred             cCcceEEEcCCCeEEE
Confidence            9999999998887764


No 257
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.71  E-value=1.2e-16  Score=107.79  Aligned_cols=94  Identities=35%  Similarity=0.567  Sum_probs=80.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.++++++|+|++++.+.+..+...+++|||++++.+..+... ...+++..+..++.|++.++.|+|+.|++|+|+
T Consensus        48 ~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl  126 (286)
T cd07847          48 LREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDV  126 (286)
T ss_pred             HHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence            4456667777777777799999999999999999999888766533 456889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.++|
T Consensus       127 ~p~nil~~~~~~~~l  141 (286)
T cd07847         127 KPENILITKQGQIKL  141 (286)
T ss_pred             ChhhEEEcCCCcEEE
Confidence            999999998887764


No 258
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.71  E-value=9.4e-17  Score=107.03  Aligned_cols=93  Identities=20%  Similarity=0.330  Sum_probs=78.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.+.|+|++++++.+. ....+++||+++++++.+++... ..+++.....++.|++.++.|+|..+++|+|+
T Consensus        44 ~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di  121 (257)
T cd05060          44 LREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAMGMAYLESKHFVHRDL  121 (257)
T ss_pred             HHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCc
Confidence            44566666677777777888765 44579999999999999887653 46889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+|++++.++.+++
T Consensus       122 ~p~nili~~~~~~kl  136 (257)
T cd05060         122 AARNVLLVNRHQAKI  136 (257)
T ss_pred             ccceEEEcCCCcEEe
Confidence            999999998887764


No 259
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.71  E-value=4.9e-17  Score=109.75  Aligned_cols=93  Identities=33%  Similarity=0.592  Sum_probs=76.0

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+.+....++++||+.+ ++...+......+++..+..++.|++.|+.|+|+.|++|+|++
T Consensus        48 ~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~  126 (284)
T cd07839          48 REICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLK  126 (284)
T ss_pred             HHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            355555555666666677777778889999999975 6666665545668999999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.++|
T Consensus       127 ~~nil~~~~~~~~l  140 (284)
T cd07839         127 PQNLLINKNGELKL  140 (284)
T ss_pred             HHHEEEcCCCcEEE
Confidence            99999998887764


No 260
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.71  E-value=9.8e-17  Score=107.38  Aligned_cols=93  Identities=31%  Similarity=0.548  Sum_probs=74.7

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      .|+.+++.++|+|++++++.+.+.  ...++++|+++++++.+.+.. ...+++.....++.|++.++.|+|+.|++|+|
T Consensus        53 ~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~d  131 (264)
T cd06653          53 CEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQGVSYLHSNMIVHRD  131 (264)
T ss_pred             HHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            344455555555555588887653  568899999999999888754 34578888999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       132 l~p~ni~i~~~~~~~l  147 (264)
T cd06653         132 IKGANILRDSAGNVKL  147 (264)
T ss_pred             CCHHHEEEcCCCCEEE
Confidence            9999999998877653


No 261
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.71  E-value=1.1e-16  Score=107.24  Aligned_cols=94  Identities=21%  Similarity=0.359  Sum_probs=76.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++++++.+. +...+++||+++++++.+++... ...+++.....++.+++.++.|+|+.+++|+|
T Consensus        49 ~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d  127 (262)
T cd05071          49 LQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  127 (262)
T ss_pred             HHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            44566666666666666877664 45578999999999998887643 23468888899999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.++|
T Consensus       128 l~p~Nill~~~~~~~L  143 (262)
T cd05071         128 LRAANILVGENLVCKV  143 (262)
T ss_pred             cCcccEEEcCCCcEEe
Confidence            9999999998887764


No 262
>KOG1095|consensus
Probab=99.71  E-value=4.3e-17  Score=123.58  Aligned_cols=105  Identities=32%  Similarity=0.507  Sum_probs=94.7

Q ss_pred             ccchhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHH
Q psy15406          4 LEGEEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIM   83 (134)
Q Consensus         4 ~~~~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~   83 (134)
                      ..+.++.++|++|..+|++++||||++                          +.+.+.+.+..++++||+++|+|.+++
T Consensus       733 ~~~~~~~~~Fl~Ea~~m~~f~HpNiv~--------------------------liGv~l~~~~~~i~leyM~gGDL~sfl  786 (1025)
T KOG1095|consen  733 LSSEQEVSDFLKEALLMSKFDHPNIVS--------------------------LIGVCLDSGPPLILLEYMEGGDLLSFL  786 (1025)
T ss_pred             cCCHHHHHHHHHHHHHHhcCCCcceee--------------------------EEEeecCCCCcEEEehhcccCcHHHHH
Confidence            345678899999999999999999998                          888888889999999999999999999


Q ss_pred             HHh------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         84 LEL------EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        84 ~~~------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+.      ...+.......++.+++.|+.||++++.+||||.++|+|++....+||
T Consensus       787 r~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKI  843 (1025)
T KOG1095|consen  787 RESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKI  843 (1025)
T ss_pred             HhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEE
Confidence            876      456788899999999999999999999999999999999998887775


No 263
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.71  E-value=1.7e-16  Score=105.49  Aligned_cols=89  Identities=30%  Similarity=0.475  Sum_probs=72.1

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      |+.++++++|+|++++++.+..+...++++|+++++++.+++.... ..+++..+..++.+++.++.|+|++|++|+|++
T Consensus        49 e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  128 (256)
T cd08220          49 ECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLK  128 (256)
T ss_pred             HHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            3444444444444448888888889999999999999998886532 347889999999999999999999999999999


Q ss_pred             CCCeEEecCC
Q psy15406        121 AGNVLLTMSG  130 (134)
Q Consensus       121 ~~nill~~~~  130 (134)
                      |+||+++.++
T Consensus       129 ~~nil~~~~~  138 (256)
T cd08220         129 TQNILLDKHK  138 (256)
T ss_pred             HHHEEEcCCC
Confidence            9999997553


No 264
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.71  E-value=8.6e-17  Score=109.81  Aligned_cols=94  Identities=22%  Similarity=0.356  Sum_probs=77.7

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+... ..+++++++++|++.+.+......+++.....++.|++.|+.|+|++|++|+|+
T Consensus        57 ~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~di  135 (303)
T cd05110          57 MDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDL  135 (303)
T ss_pred             HHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeecccc
Confidence            3456666667777777788877654 467899999999998887654456788899999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      ||+||+++.++.+++
T Consensus       136 kp~Nill~~~~~~kL  150 (303)
T cd05110         136 AARNVLVKSPNHVKI  150 (303)
T ss_pred             ccceeeecCCCceEE
Confidence            999999988877664


No 265
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.71  E-value=1.1e-16  Score=107.95  Aligned_cols=89  Identities=31%  Similarity=0.475  Sum_probs=73.0

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE------KPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      |+.+++.++|+|++++++.+......+++|||++++++..++....      ..+++.....++.|++.++.|+|+.+++
T Consensus        59 e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv  138 (277)
T cd05036          59 EALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFI  138 (277)
T ss_pred             HHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            4444555555555558888888888999999999999998875532      1477888899999999999999999999


Q ss_pred             cCCCCCCCeEEecCC
Q psy15406        116 HRDLKAGNVLLTMSG  130 (134)
Q Consensus       116 h~dik~~nill~~~~  130 (134)
                      |+|++|+||+++.++
T Consensus       139 H~dlkp~nil~~~~~  153 (277)
T cd05036         139 HRDIAARNCLLTCKG  153 (277)
T ss_pred             ecccchheEEEeccC
Confidence            999999999997654


No 266
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.71  E-value=9.8e-17  Score=107.86  Aligned_cols=93  Identities=38%  Similarity=0.718  Sum_probs=79.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++.+.+.+..+...|+++|+++++++..++..  ..+++.....++.|++.++.|+|+.+++|+|+
T Consensus        47 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl  124 (274)
T cd06609          47 QQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP--GKLDETYIAFILREVLLGLEYLHEEGKIHRDI  124 (274)
T ss_pred             HHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            3455666666666666699999999999999999999999988754  37889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+|++++.++.+++
T Consensus       125 ~p~ni~i~~~~~~~l  139 (274)
T cd06609         125 KAANILLSEEGDVKL  139 (274)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887653


No 267
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.71  E-value=1.8e-16  Score=110.04  Aligned_cols=45  Identities=36%  Similarity=0.558  Sum_probs=39.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         90 LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        90 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++......++.|++.|+.|+|+.|++|+|+||+||+++.++.+++
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl  220 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKI  220 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEE
Confidence            456677788999999999999999999999999999998887764


No 268
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.71  E-value=1.2e-16  Score=107.91  Aligned_cols=96  Identities=26%  Similarity=0.361  Sum_probs=79.2

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh---------------CCCCCHHHHHHHHHHHH
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL---------------EKPLTEQQIRYICHYMC  103 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~i~  103 (134)
                      ...|+.+++.++|+|++++++.+......+++++|++++++..++...               ...++......++.|++
T Consensus        55 ~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~  134 (283)
T cd05091          55 FKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIA  134 (283)
T ss_pred             HHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHH
Confidence            344566666677777777999999888999999999999998887431               12367777888999999


Q ss_pred             HHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        104 KALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       104 ~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .|+.|+|+.|++|+|+||+||+++.++.+++
T Consensus       135 ~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl  165 (283)
T cd05091         135 AGMEFLSSHHVVHKDLATRNVLVFDKLNVKI  165 (283)
T ss_pred             HHHHHHHHcCccccccchhheEecCCCceEe
Confidence            9999999999999999999999998877764


No 269
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.71  E-value=7.1e-17  Score=109.79  Aligned_cols=92  Identities=39%  Similarity=0.736  Sum_probs=77.7

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|||++++++.+......|+++||++++++..++.+  ..++...+..++.+++.++.|+|+.|++|+|++
T Consensus        65 ~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~  142 (293)
T cd06647          65 NEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK  142 (293)
T ss_pred             HHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCC
Confidence            345556666666666688888888899999999999999988754  457788888999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+|++++.++.++|
T Consensus       143 p~Nili~~~~~~kL  156 (293)
T cd06647         143 SDNILLGMDGSVKL  156 (293)
T ss_pred             HHHEEEcCCCCEEE
Confidence            99999988877654


No 270
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.71  E-value=5.5e-17  Score=107.98  Aligned_cols=92  Identities=39%  Similarity=0.730  Sum_probs=80.6

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      |+.+++.++|+|++++.+.+..+...+++|++++++++..++.. ...++...+..++.|++.++.++|+.|++|+||||
T Consensus        48 e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp  126 (260)
T PF00069_consen   48 EIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKP  126 (260)
T ss_dssp             HHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSG
T ss_pred             hhhccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccc
Confidence            56666666677777799999999999999999999999888763 46789999999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.+++
T Consensus       127 ~NIl~~~~~~~~l  139 (260)
T PF00069_consen  127 ENILLDENGEVKL  139 (260)
T ss_dssp             GGEEESTTSEEEE
T ss_pred             ccccccccccccc
Confidence            9999998887753


No 271
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.71  E-value=1.5e-16  Score=110.37  Aligned_cols=102  Identities=21%  Similarity=0.466  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCC
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKP   89 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~   89 (134)
                      .+.+.+|++++++++||||+++++.+....                    ........|++++++ ++++..+..  ...
T Consensus        58 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------------------~~~~~~~~~~~~~~~-~~~l~~~~~--~~~  114 (343)
T cd07878          58 ARRTYRELRLLKHMKHENVIGLLDVFTPAT--------------------SIENFNEVYLVTNLM-GADLNNIVK--CQK  114 (343)
T ss_pred             HHHHHHHHHHHHhcCCCchhhhhhhhcccc--------------------cccccCcEEEEeecC-CCCHHHHHh--cCC
Confidence            355667888888888888887665542211                    001123478999987 667877654  356


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         90 LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        90 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +++..+..++.|++.|+.|+|+.|++||||||+||+++.++.++|
T Consensus       115 l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl  159 (343)
T cd07878         115 LSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI  159 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEE
Confidence            899999999999999999999999999999999999999888764


No 272
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.71  E-value=1.1e-16  Score=107.16  Aligned_cols=94  Identities=32%  Similarity=0.539  Sum_probs=76.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+.+++.++|+|++++++.+..  ....++++|+++++++...+.. ...+++.....++.|++.++.|+|+.+++|+
T Consensus        52 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~  130 (266)
T cd06651          52 ECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQILEGMSYLHSNMIVHR  130 (266)
T ss_pred             HHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence            344555555566666668887765  3678999999999999888755 3457888888999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.++|
T Consensus       131 ~l~p~nil~~~~~~~~l  147 (266)
T cd06651         131 DIKGANILRDSAGNVKL  147 (266)
T ss_pred             CCCHHHEEECCCCCEEE
Confidence            99999999998877664


No 273
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.71  E-value=2.3e-16  Score=104.59  Aligned_cols=94  Identities=39%  Similarity=0.692  Sum_probs=77.9

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      .|+++++.++|+|++++.+.+..++..++++|+++++++...+...   ...++......++.+++.++.++|..|++|+
T Consensus        48 ~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~  127 (258)
T cd08215          48 NEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHR  127 (258)
T ss_pred             HHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence            3444444455555555888888889999999999999998887654   2668899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+|++++.++.+++
T Consensus       128 dl~~~nil~~~~~~~~l  144 (258)
T cd08215         128 DIKPQNIFLTSNGLVKL  144 (258)
T ss_pred             cCChHHeEEcCCCcEEE
Confidence            99999999998877654


No 274
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.71  E-value=6.2e-17  Score=117.45  Aligned_cols=96  Identities=26%  Similarity=0.366  Sum_probs=78.6

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE----KPLTEQQIRYICHYMCKALQFLHTHR  113 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~  113 (134)
                      ....|+.+++.++|+||+++++++...+..|++++++.+ .+..++....    .......+..++.|++.|+.|+|+.|
T Consensus       209 ~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g  287 (501)
T PHA03210        209 QLENEILALGRLNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK  287 (501)
T ss_pred             HHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            346789999999999999999999999999999999865 4544443211    12235567788999999999999999


Q ss_pred             CccCCCCCCCeEEecCCeeeC
Q psy15406        114 VIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       114 i~h~dik~~nill~~~~~~~i  134 (134)
                      ++||||||+||+++.+|.++|
T Consensus       288 IiHrDLKP~NILl~~~~~vkL  308 (501)
T PHA03210        288 LIHRDIKLENIFLNCDGKIVL  308 (501)
T ss_pred             eecCCCCHHHEEECCCCCEEE
Confidence            999999999999998888764


No 275
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.71  E-value=8.7e-17  Score=108.38  Aligned_cols=94  Identities=38%  Similarity=0.688  Sum_probs=81.9

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.++++++|+|++++++.+..+...|+++||++++++..++..  ..+++..+..++.+++.++.++|+.|++|+|
T Consensus        49 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  126 (277)
T cd06641          49 IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRD  126 (277)
T ss_pred             HHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCC
Confidence            44566777777788888899999999999999999999999887653  4678899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+|++++.++.+++
T Consensus       127 l~p~Ni~i~~~~~~~l  142 (277)
T cd06641         127 IKAANVLLSEHGEVKL  142 (277)
T ss_pred             CCHHhEEECCCCCEEE
Confidence            9999999998887653


No 276
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.71  E-value=1.9e-16  Score=108.76  Aligned_cols=94  Identities=37%  Similarity=0.661  Sum_probs=78.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++.+++..+...+++|||+++ ++.+.+......+++..+..++.+++.++.|+|+.|++|+|+
T Consensus        73 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL  151 (317)
T cd06635          73 IKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDI  151 (317)
T ss_pred             HHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            4456666677777777799999999999999999975 666665544566889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       152 ~p~Nil~~~~~~~kl  166 (317)
T cd06635         152 KAGNILLTEPGQVKL  166 (317)
T ss_pred             CcccEEECCCCCEEE
Confidence            999999998887664


No 277
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.71  E-value=2.8e-16  Score=108.95  Aligned_cols=95  Identities=31%  Similarity=0.508  Sum_probs=75.0

Q ss_pred             HHHHHHHhhC-CCCCccccceeeee-CCEEEEEEeccCCCCHHHHHHHhC------------------------------
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFT-NGKLWMLIEYCDGGAVDSIMLELE------------------------------   87 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~------------------------------   87 (134)
                      ..|+.++..+ +|+|++++++.+.. +..+++++||++++++.+++....                              
T Consensus        58 ~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (337)
T cd05054          58 MTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVS  137 (337)
T ss_pred             HHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCC
Confidence            3455555555 46666668877664 466899999999999988774321                              


Q ss_pred             ------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         88 ------------------------------KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        88 ------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                                                    ..+++..+..++.|++.++.|+|++|++|||+||+||+++.++.++|
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL  214 (337)
T cd05054         138 SSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKI  214 (337)
T ss_pred             ccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEE
Confidence                                          24677888899999999999999999999999999999998887764


No 278
>KOG0666|consensus
Probab=99.71  E-value=5.3e-17  Score=109.00  Aligned_cols=95  Identities=29%  Similarity=0.550  Sum_probs=74.9

Q ss_pred             hHHHHHHHhhCCCCCccccceeeee-CCEEEEEEeccCCCCHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFT-NGKLWMLIEYCDGGAVDSIMLE----LEKPLTEQQIRYICHYMCKALQFLHTHR  113 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~  113 (134)
                      +-+|+.+++.++|+|++.+...|.. +..+|+++||.+. +|...+.-    ....++...+..++.|++.|+.|+|++=
T Consensus        74 AcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW  152 (438)
T KOG0666|consen   74 ACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW  152 (438)
T ss_pred             HHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh
Confidence            4556666666666666666666655 6789999999987 55555532    1245788999999999999999999999


Q ss_pred             CccCCCCCCCeEEecC----CeeeC
Q psy15406        114 VIHRDLKAGNVLLTMS----GGVKL  134 (134)
Q Consensus       114 i~h~dik~~nill~~~----~~~~i  134 (134)
                      ++|||+||.||++..+    |++||
T Consensus       153 vlHRDLKPaNIlvmgdgperG~VKI  177 (438)
T KOG0666|consen  153 VLHRDLKPANILVMGDGPERGRVKI  177 (438)
T ss_pred             eeeccCCcceEEEeccCCccCeeEe
Confidence            9999999999999877    88775


No 279
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.70  E-value=3.2e-16  Score=106.00  Aligned_cols=97  Identities=40%  Similarity=0.766  Sum_probs=85.5

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+++++.++|+|++++++.+......|+++||+++++|.+++......++......++.+++.++.|+|+.|++|+
T Consensus        61 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~  140 (286)
T cd06614          61 LIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHR  140 (286)
T ss_pred             HHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence            34556777888888888889999999999999999999999999887643378899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.++|
T Consensus       141 dl~p~ni~i~~~~~~~l  157 (286)
T cd06614         141 DIKSDNILLSKDGSVKL  157 (286)
T ss_pred             CCChhhEEEcCCCCEEE
Confidence            99999999998887764


No 280
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.70  E-value=1.8e-16  Score=107.47  Aligned_cols=93  Identities=28%  Similarity=0.464  Sum_probs=77.8

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+..+...|+++|++. +++...+......+.+..+..++.|++.++.|+|+.|++|+|+|
T Consensus        52 ~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk  130 (291)
T cd07870          52 REASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLK  130 (291)
T ss_pred             HHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            46677777777888889999999999999999996 56665555444556778888899999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.++|
T Consensus       131 p~Nil~~~~~~~~l  144 (291)
T cd07870         131 PQNLLISYLGELKL  144 (291)
T ss_pred             hHHEEEcCCCcEEE
Confidence            99999998887764


No 281
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.70  E-value=1.1e-16  Score=108.04  Aligned_cols=92  Identities=34%  Similarity=0.595  Sum_probs=73.6

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      |+++++.++|+|++++++.+..+...|+++||++++.+..+... ...+++.....++.|++.++.|+|+.|++|+|++|
T Consensus        50 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p  128 (286)
T cd07846          50 EIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKP  128 (286)
T ss_pred             HHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence            34444444444444466677778889999999999888766543 34588999999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +|++++.++.+++
T Consensus       129 ~ni~~~~~~~~~l  141 (286)
T cd07846         129 ENILVSQSGVVKL  141 (286)
T ss_pred             HHEEECCCCcEEE
Confidence            9999998887753


No 282
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.70  E-value=1.3e-16  Score=112.96  Aligned_cols=96  Identities=27%  Similarity=0.394  Sum_probs=78.5

Q ss_pred             hHHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC------------------------------
Q psy15406         39 GKLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE------------------------------   87 (134)
Q Consensus        39 ~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~------------------------------   87 (134)
                      ...|++++..+. |+|++.+++.+...+..+++|||+++|+|.+++....                              
T Consensus        87 ~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (401)
T cd05107          87 LMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKS  166 (401)
T ss_pred             HHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhccccccccccccccccccccccc
Confidence            345677777776 7788889999999899999999999999988775321                              


Q ss_pred             -------------------------------------------------------------------CCCCHHHHHHHHH
Q psy15406         88 -------------------------------------------------------------------KPLTEQQIRYICH  100 (134)
Q Consensus        88 -------------------------------------------------------------------~~~~~~~~~~~~~  100 (134)
                                                                                         ..++......++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  246 (401)
T cd05107         167 HVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSY  246 (401)
T ss_pred             chhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHH
Confidence                                                                               1245556777889


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        101 YMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       101 ~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |++.|+.|+|+.+++|+|+||+||+++.++.+++
T Consensus       247 qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL  280 (401)
T cd05107         247 QVANGMEFLASKNCVHRDLAARNVLICEGKLVKI  280 (401)
T ss_pred             HHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEE
Confidence            9999999999999999999999999998877653


No 283
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.70  E-value=1.7e-16  Score=107.29  Aligned_cols=94  Identities=30%  Similarity=0.599  Sum_probs=78.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~d  118 (134)
                      ..|+++++.++|+|++++++.+......++++||++++++..++.. ...+++.....++.+++.++.|+|+ .+++|+|
T Consensus        51 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~d  129 (284)
T cd06620          51 LRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRD  129 (284)
T ss_pred             HHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccC
Confidence            3455555556666666699999999999999999999999887654 3568899999999999999999997 5899999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+|++++.++.+++
T Consensus       130 l~p~nil~~~~~~~~l  145 (284)
T cd06620         130 IKPSNILVNSRGQIKL  145 (284)
T ss_pred             CCHHHEEECCCCcEEE
Confidence            9999999998887654


No 284
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.70  E-value=1.4e-16  Score=108.05  Aligned_cols=95  Identities=28%  Similarity=0.525  Sum_probs=82.0

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ...|+.++++++|||++++.+.+...  ...|+++||+++ ++..++......+++.....++.|++.|+.|+|+.|++|
T Consensus        51 ~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H  129 (293)
T cd07843          51 SLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILH  129 (293)
T ss_pred             HHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            34577888888888888899988877  889999999975 787776554456899999999999999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      +|++|+||+++.++.+++
T Consensus       130 ~dl~p~nili~~~~~~~l  147 (293)
T cd07843         130 RDLKTSNLLLNNRGILKI  147 (293)
T ss_pred             ccCCHHHEEECCCCcEEE
Confidence            999999999998887764


No 285
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.70  E-value=2.7e-16  Score=107.59  Aligned_cols=93  Identities=35%  Similarity=0.659  Sum_probs=77.3

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++.+++..+...++++||+.+ ++...+......+++..+..++.+++.++.|+|+.+++|+|++
T Consensus        64 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~  142 (308)
T cd06634          64 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK  142 (308)
T ss_pred             HHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            455666666666666699999989999999999974 6666655445568889999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.+++
T Consensus       143 p~nil~~~~~~~kl  156 (308)
T cd06634         143 AGNILLSEPGLVKL  156 (308)
T ss_pred             HHhEEECCCCcEEE
Confidence            99999998887764


No 286
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.70  E-value=3.9e-16  Score=103.39  Aligned_cols=92  Identities=38%  Similarity=0.572  Sum_probs=74.3

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      |+.+++.++|+|++++++.+..+...+++||+++++++.+.+.. ...+++.....++.|++.++.|+|+.+++|+|++|
T Consensus        43 e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p  121 (250)
T cd05123          43 ERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSK-EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKP  121 (250)
T ss_pred             HHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCc
Confidence            33444444444444466677778889999999999999888754 34688999999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.+++
T Consensus       122 ~ni~~~~~~~~~l  134 (250)
T cd05123         122 ENILLDADGHIKL  134 (250)
T ss_pred             ceEEEcCCCcEEE
Confidence            9999998877653


No 287
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.70  E-value=6.9e-17  Score=106.78  Aligned_cols=88  Identities=23%  Similarity=0.351  Sum_probs=77.2

Q ss_pred             HhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeE
Q psy15406         46 LSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVL  125 (134)
Q Consensus        46 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nil  125 (134)
                      +....|||++++++.+......+++|||+++|+|.+++.. ...+++.....++.|++.++.|+|+.|++|+|+||+|++
T Consensus        39 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil  117 (237)
T cd05576          39 IIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNIL  117 (237)
T ss_pred             HHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence            3344688888899999989999999999999999888755 346889999999999999999999999999999999999


Q ss_pred             EecCCeeeC
Q psy15406        126 LTMSGGVKL  134 (134)
Q Consensus       126 l~~~~~~~i  134 (134)
                      ++.++.+++
T Consensus       118 ~~~~~~~~l  126 (237)
T cd05576         118 LDDRGHIQL  126 (237)
T ss_pred             EcCCCCEEE
Confidence            998887653


No 288
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.70  E-value=2.6e-16  Score=104.33  Aligned_cols=96  Identities=34%  Similarity=0.538  Sum_probs=81.7

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+++++.++|+|++++.+.+..+...++++++++++++..++.. ...+++.....++.+++.++.++|+.|++|+
T Consensus        45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~  123 (254)
T cd06627          45 SIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKK-FGPFPESLVAVYVYQVLQGLAYLHEQGVIHR  123 (254)
T ss_pred             HHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHhhCCcccC
Confidence            345566666666777777799999988999999999999999888754 3678899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.++|
T Consensus       124 dl~p~ni~i~~~~~~~l  140 (254)
T cd06627         124 DIKAANILTTKDGVVKL  140 (254)
T ss_pred             CCCHHHEEECCCCCEEE
Confidence            99999999998877653


No 289
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.70  E-value=3.9e-16  Score=107.09  Aligned_cols=94  Identities=37%  Similarity=0.669  Sum_probs=78.2

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+.+++.++|+|++++++.+..+...|++|||+.+ ++...+......+++..+..++.|++.++.|+|+.|++|+|+
T Consensus        69 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl  147 (313)
T cd06633          69 IKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDI  147 (313)
T ss_pred             HHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            3456666666677777799999999999999999975 666666554566888999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       148 ~p~nili~~~~~~kL  162 (313)
T cd06633         148 KAGNILLTEPGQVKL  162 (313)
T ss_pred             ChhhEEECCCCCEEE
Confidence            999999998887764


No 290
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.70  E-value=6.5e-17  Score=109.17  Aligned_cols=93  Identities=31%  Similarity=0.520  Sum_probs=73.8

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .|++++++++|+|++++++.+..+...+++|||+. +++..++... ...+++..+..++.+++.|+.|+|+.+++|+|+
T Consensus        48 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l  126 (284)
T cd07860          48 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL  126 (284)
T ss_pred             HHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            34455555555555557777777888999999996 4676665442 346788999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       127 ~p~nill~~~~~~~l  141 (284)
T cd07860         127 KPQNLLINTEGAIKL  141 (284)
T ss_pred             CHHHEEECCCCCEEE
Confidence            999999998887764


No 291
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.69  E-value=2.8e-16  Score=104.48  Aligned_cols=90  Identities=31%  Similarity=0.603  Sum_probs=73.1

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .|+.+++.++|+|++++++.+..++..++++||++++++..++.... ..+++.....++.+++.++.|+|+.+++|+|+
T Consensus        48 ~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl  127 (257)
T cd08225          48 KEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDI  127 (257)
T ss_pred             HHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence            34444445555555557778888889999999999999988875532 24688899999999999999999999999999


Q ss_pred             CCCCeEEecCC
Q psy15406        120 KAGNVLLTMSG  130 (134)
Q Consensus       120 k~~nill~~~~  130 (134)
                      +|+||+++.++
T Consensus       128 ~~~nil~~~~~  138 (257)
T cd08225         128 KSQNIFLSKNG  138 (257)
T ss_pred             CHHHEEEcCCC
Confidence            99999998775


No 292
>KOG0614|consensus
Probab=99.69  E-value=9.6e-18  Score=118.56  Aligned_cols=113  Identities=29%  Similarity=0.467  Sum_probs=96.0

Q ss_pred             HHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHH
Q psy15406         19 ILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYI   98 (134)
Q Consensus        19 ~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~   98 (134)
                      .|+-++..+||..  ........|-.||..+..|+|+++|..|.++.++|+.||-|-||.+++.+.+ .+++....++++
T Consensus       449 AlKilkK~hIVdt--kQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrd-Rg~Fdd~tarF~  525 (732)
T KOG0614|consen  449 ALKILKKKHIVDT--KQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRD-RGSFDDYTARFY  525 (732)
T ss_pred             HHHHHhHhhccch--hHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhh-cCCcccchhhhh
Confidence            4455555556542  2223445567888888999999999999999999999999999999999876 478999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         99 CHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        99 ~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ...++.|..|+|+.||+.||+||+|++++.+|.+|+
T Consensus       526 ~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KL  561 (732)
T KOG0614|consen  526 VACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKL  561 (732)
T ss_pred             HHHHHHHHHHHHhcCceeccCChhheeeccCCceEE
Confidence            999999999999999999999999999999999875


No 293
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.69  E-value=3.9e-16  Score=105.47  Aligned_cols=90  Identities=27%  Similarity=0.458  Sum_probs=78.8

Q ss_pred             HHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCC
Q psy15406         44 DILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGN  123 (134)
Q Consensus        44 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~n  123 (134)
                      .++...+|+|++.+++.+..++..+++|||++++++..++.. ...+++..+..++.|++.|+.|+|+.+++|+|+||+|
T Consensus        49 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~N  127 (279)
T cd05633          49 SLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPAN  127 (279)
T ss_pred             HHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHH
Confidence            344455789999999999988999999999999999877654 4568999999999999999999999999999999999


Q ss_pred             eEEecCCeeeC
Q psy15406        124 VLLTMSGGVKL  134 (134)
Q Consensus       124 ill~~~~~~~i  134 (134)
                      |+++.++.+++
T Consensus       128 il~~~~~~~~l  138 (279)
T cd05633         128 ILLDEHGHVRI  138 (279)
T ss_pred             EEECCCCCEEE
Confidence            99998887653


No 294
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.69  E-value=2.2e-16  Score=106.20  Aligned_cols=92  Identities=37%  Similarity=0.704  Sum_probs=78.5

Q ss_pred             HHHHHHhhCC---CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         41 LWIDILSDCK---HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        41 ~~~~~~~~~~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      .|+.+++.++   |+|++++++.+..+...|++|||+++++|..++..  ..+++.....++.+++.++.|+|+.|++|+
T Consensus        48 ~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~  125 (277)
T cd06917          48 REVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVGVIHR  125 (277)
T ss_pred             HHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            3445555553   77888899999989999999999999999887644  468889999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       126 dl~p~ni~i~~~~~~~l  142 (277)
T cd06917         126 DIKAANILVTNTGNVKL  142 (277)
T ss_pred             CcCHHHEEEcCCCCEEE
Confidence            99999999998887754


No 295
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.69  E-value=1.7e-16  Score=105.96  Aligned_cols=93  Identities=22%  Similarity=0.436  Sum_probs=75.1

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .|+.+++.++|+|++++++.+ .+...+++||+++++++.+++... ...++......++.+++.++.|+|+.|++|+|+
T Consensus        50 ~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl  128 (260)
T cd05067          50 AEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDL  128 (260)
T ss_pred             HHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccc
Confidence            355566666666666687765 455689999999999998877543 245788888999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+|++++.++.+++
T Consensus       129 ~p~ni~i~~~~~~~l  143 (260)
T cd05067         129 RAANILVSETLCCKI  143 (260)
T ss_pred             cHHhEEEcCCCCEEE
Confidence            999999998877653


No 296
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.69  E-value=4.1e-16  Score=104.13  Aligned_cols=94  Identities=19%  Similarity=0.361  Sum_probs=78.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|+|++++++.+. ....+++||+++++++.+++... ...+++.....++.+++.++.|+|+.|++|+|
T Consensus        49 ~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d  127 (260)
T cd05070          49 LEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD  127 (260)
T ss_pred             HHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            45677777777777777887764 45688999999999999887653 24578899999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+|++++.++.+++
T Consensus       128 i~p~Nili~~~~~~~l  143 (260)
T cd05070         128 LRSANILVGDGLVCKI  143 (260)
T ss_pred             CccceEEEeCCceEEe
Confidence            9999999998887764


No 297
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.69  E-value=1.2e-16  Score=111.48  Aligned_cols=90  Identities=23%  Similarity=0.455  Sum_probs=70.2

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC------CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN------GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      +|+.+++.++|||++++++.+...      ...|++|||+.++ +...+.   ..++...+..++.|++.|+.|+|++|+
T Consensus        69 ~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~i  144 (359)
T cd07876          69 RELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQVIH---MELDHERMSYLLYQMLCGIKHLHSAGI  144 (359)
T ss_pred             HHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCcC-HHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            455566666666666677776543      2479999999764 444432   357788888999999999999999999


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +||||||+||+++.+|.++|
T Consensus       145 vHrDlkp~NIl~~~~~~~kl  164 (359)
T cd07876         145 IHRDLKPSNIVVKSDCTLKI  164 (359)
T ss_pred             ccCCCCHHHEEECCCCCEEE
Confidence            99999999999999888764


No 298
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.69  E-value=3.8e-16  Score=104.65  Aligned_cols=95  Identities=41%  Similarity=0.719  Sum_probs=76.0

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeC------CEEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTN------GKLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      ..|+.+++++ +|+|++++++.+...      ...|++|||++++++.+++...   +..+++..+..++.|++.++.|+
T Consensus        50 ~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l  129 (275)
T cd06608          50 KEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL  129 (275)
T ss_pred             HHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3445555555 466666688888654      3589999999999998876542   35678899999999999999999


Q ss_pred             HHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        110 HTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       110 h~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |+.|++|+|++|+||+++.++.+++
T Consensus       130 H~~~i~H~~l~p~ni~~~~~~~~~l  154 (275)
T cd06608         130 HENKVIHRDIKGQNILLTKNAEVKL  154 (275)
T ss_pred             hcCCcccCCCCHHHEEEccCCeEEE
Confidence            9999999999999999998887764


No 299
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.69  E-value=1.7e-16  Score=110.53  Aligned_cols=88  Identities=23%  Similarity=0.486  Sum_probs=65.5

Q ss_pred             HHHHhhCCCCCccccceeeeeC------CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         43 IDILSDCKHENIVQLYEAFFTN------GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      +.+++.++|+|++++++.+...      ...|++|||++++ +...+.   ..++...+..++.|++.|+.|+|+.|++|
T Consensus        67 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH  142 (355)
T cd07874          67 LVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIH  142 (355)
T ss_pred             HHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhccc-HHHHHh---hcCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            3334444444444466555432      3579999999764 444432   35788888899999999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      ||+||+||+++.++.++|
T Consensus       143 rDikp~Nill~~~~~~kl  160 (355)
T cd07874         143 RDLKPSNIVVKSDCTLKI  160 (355)
T ss_pred             CCCChHHEEECCCCCEEE
Confidence            999999999999888764


No 300
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.69  E-value=3.3e-16  Score=106.04  Aligned_cols=94  Identities=30%  Similarity=0.453  Sum_probs=78.1

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.++.++ +|+|++.+++.+..+...+++|||++++++...+.. ...+++..+..++.|++.++.|+|+.|++|+|
T Consensus        52 ~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~d  130 (288)
T cd05583          52 RTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRD  130 (288)
T ss_pred             HHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            3455556666 366666688888888899999999999999887754 35678888999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       131 l~p~nil~~~~~~~~l  146 (288)
T cd05583         131 IKLENILLDSEGHVVL  146 (288)
T ss_pred             CCHHHeEECCCCCEEE
Confidence            9999999998877653


No 301
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.69  E-value=3.9e-16  Score=105.74  Aligned_cols=94  Identities=37%  Similarity=0.667  Sum_probs=74.0

Q ss_pred             HHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      +|+++++.++|+|++++++.+..  .+.++++|||+++++|.+++..   ....++......++.+++.++.|+|+.|++
T Consensus        48 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~  127 (287)
T cd06621          48 RELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKII  127 (287)
T ss_pred             HHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            34455555555555558777754  3468999999999999876542   234578888999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      |+|++|+||+++.++.+++
T Consensus       128 H~dl~~~nil~~~~~~~~l  146 (287)
T cd06621         128 HRDIKPSNILLTRKGQVKL  146 (287)
T ss_pred             cCCCCHHHEEEecCCeEEE
Confidence            9999999999998877653


No 302
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.69  E-value=2.7e-16  Score=104.74  Aligned_cols=93  Identities=35%  Similarity=0.616  Sum_probs=74.1

Q ss_pred             HHHHHhhCCCCCccccceeee--eCCEEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHH-----H
Q psy15406         42 WIDILSDCKHENIVQLYEAFF--TNGKLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFLH-----T  111 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh-----~  111 (134)
                      |+.+++.++|+|++++++.+.  .+...|+++||++++++.+++...   ...+++.....++.+++.++.|+|     .
T Consensus        49 e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~  128 (265)
T cd08217          49 EVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG  128 (265)
T ss_pred             HHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc
Confidence            444445555555555777665  345689999999999998887543   356788999999999999999999     8


Q ss_pred             CCCccCCCCCCCeEEecCCeeeC
Q psy15406        112 HRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+++|+|++|+||+++.++.+++
T Consensus       129 ~~i~h~dl~p~nili~~~~~~kl  151 (265)
T cd08217         129 NTVLHRDLKPANIFLDANNNVKL  151 (265)
T ss_pred             CcceecCCCHHHEEEecCCCEEE
Confidence            89999999999999998887764


No 303
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.69  E-value=1.8e-16  Score=107.12  Aligned_cols=95  Identities=32%  Similarity=0.547  Sum_probs=80.1

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+++++.++|+|++++.+.+..++..++++||++++.+..+. .....++...+..++.+++.++.|+|+.+++|+|
T Consensus        47 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  125 (288)
T cd07833          47 ALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLE-ASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRD  125 (288)
T ss_pred             HHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            345667777777777777999999999999999999987666544 3345688999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       126 l~~~ni~~~~~~~~kl  141 (288)
T cd07833         126 IKPENILVSESGVLKL  141 (288)
T ss_pred             CCHHHeEECCCCCEEE
Confidence            9999999998888764


No 304
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.68  E-value=3.7e-16  Score=105.43  Aligned_cols=94  Identities=33%  Similarity=0.516  Sum_probs=78.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE--KPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..|+.+++.++|+|++++++.+...+..+++|||+++ ++..++....  ..+++..+..++.|++.++.|+|+.|++|+
T Consensus        46 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~  124 (284)
T cd07836          46 IREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHR  124 (284)
T ss_pred             HHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence            3466777777777777799999999999999999986 6766654432  357899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       125 dl~p~ni~~~~~~~~~l  141 (284)
T cd07836         125 DLKPQNLLINKRGELKL  141 (284)
T ss_pred             CCCHHHEEECCCCcEEE
Confidence            99999999998887764


No 305
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.68  E-value=1.7e-16  Score=108.81  Aligned_cols=93  Identities=28%  Similarity=0.520  Sum_probs=70.4

Q ss_pred             HHHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHh--------CCCCCHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLEL--------EKPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      .+|+.+++.++|||++++++.+..  +...|+++|++.+ ++..++...        ...+++..+..++.|++.|+.|+
T Consensus        46 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L  124 (317)
T cd07868          46 CREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL  124 (317)
T ss_pred             HHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence            345666666666677668877753  4568999999865 666554321        12478888999999999999999


Q ss_pred             HHCCCccCCCCCCCeEEe----cCCeee
Q psy15406        110 HTHRVIHRDLKAGNVLLT----MSGGVK  133 (134)
Q Consensus       110 h~~~i~h~dik~~nill~----~~~~~~  133 (134)
                      |+.|++||||||+||++.    .++.+|
T Consensus       125 H~~~ivHrDlkp~Nil~~~~~~~~~~~k  152 (317)
T cd07868         125 HANWVLHRDLKPANILVMGEGPERGRVK  152 (317)
T ss_pred             HhCCEEcCCCCHHHEEEecCCCCcCcEE
Confidence            999999999999999993    345554


No 306
>KOG4278|consensus
Probab=99.68  E-value=1.2e-16  Score=115.82  Aligned_cols=103  Identities=24%  Similarity=0.419  Sum_probs=91.0

Q ss_pred             chhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH
Q psy15406          6 GEEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE   85 (134)
Q Consensus         6 ~~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   85 (134)
                      +..+.++|++|.++|+.+.|||+|+                          +.+.|..+..+||++||++.|+|.+++..
T Consensus       303 DtMeveEFLkEAAvMKeikHpNLVq--------------------------LLGVCT~EpPFYIiTEfM~yGNLLdYLRe  356 (1157)
T KOG4278|consen  303 DTMEVEEFLKEAAVMKEIKHPNLVQ--------------------------LLGVCTHEPPFYIITEFMCYGNLLDYLRE  356 (1157)
T ss_pred             cchhHHHHHHHHHHHHhhcCccHHH--------------------------HhhhhccCCCeEEEEecccCccHHHHHHH
Confidence            4557899999999999999999999                          66677778889999999999999999987


Q ss_pred             hCCC-CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         86 LEKP-LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        86 ~~~~-~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .++. ++....+.++.||..++.|+..+..+|||+.+.|.++..+..+|+
T Consensus       357 cnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKv  406 (1157)
T KOG4278|consen  357 CNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKV  406 (1157)
T ss_pred             hchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEe
Confidence            6654 566777788999999999999999999999999999999988775


No 307
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.68  E-value=1.8e-16  Score=107.32  Aligned_cols=85  Identities=34%  Similarity=0.597  Sum_probs=70.2

Q ss_pred             CCCCCccccceeee-----eCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q psy15406         49 CKHENIVQLYEAFF-----TNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAG  122 (134)
Q Consensus        49 ~~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~  122 (134)
                      ++|||++++++.+.     .....+++||++.+ ++.+++... ...+++..+..++.|++.|+.|+|+.|++|+|+||+
T Consensus        61 ~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~  139 (290)
T cd07862          61 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQ  139 (290)
T ss_pred             cCCCCcceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHH
Confidence            46777777888775     24568999999974 777776543 245788999999999999999999999999999999


Q ss_pred             CeEEecCCeeeC
Q psy15406        123 NVLLTMSGGVKL  134 (134)
Q Consensus       123 nill~~~~~~~i  134 (134)
                      ||+++.++.+++
T Consensus       140 Nil~~~~~~~kl  151 (290)
T cd07862         140 NILVTSSGQIKL  151 (290)
T ss_pred             HEEEcCCCCEEE
Confidence            999998887764


No 308
>PRK10345 hypothetical protein; Provisional
Probab=99.68  E-value=2.2e-16  Score=102.70  Aligned_cols=95  Identities=15%  Similarity=0.221  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeC---CEEE-EEEec--cCCCCHHHH
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTN---GKLW-MLIEY--CDGGAVDSI   82 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~---~~~~-lv~e~--~~~~~l~~~   82 (134)
                      ..+++.+|+++++.+.|.+                     .+||||+++++.+.++   +.++ +++||  +.+++|.++
T Consensus        39 ~~~~~~rEi~~l~~L~~~~---------------------~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~   97 (210)
T PRK10345         39 GDKEIRRELKYYAHLSRRL---------------------IDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEF   97 (210)
T ss_pred             hHHHHHHHHHHHHHhhccC---------------------CCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHH
Confidence            4455667777777664321                     1467777799999876   3434 78999  557899998


Q ss_pred             HHHhCCCCCHHHHHHHHHHHHHHH-HHHHHCCCccCCCCCCCeEEec
Q psy15406         83 MLELEKPLTEQQIRYICHYMCKAL-QFLHTHRVIHRDLKAGNVLLTM  128 (134)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~i~~~l-~~lh~~~i~h~dik~~nill~~  128 (134)
                      +.+  ..+++.  ...+.+++.++ .|+|+++|+|||+||+||+++.
T Consensus        98 l~~--~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~  140 (210)
T PRK10345         98 AEQ--CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQR  140 (210)
T ss_pred             HHc--ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEec
Confidence            854  335544  34567777776 8999999999999999999974


No 309
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.68  E-value=5.9e-16  Score=104.53  Aligned_cols=92  Identities=26%  Similarity=0.438  Sum_probs=80.9

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      ...+++...|++++.+.+.+......+++|||+++++|..++.. ...+++..+..++.|++.++.|+|+.+++|+|++|
T Consensus        47 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p  125 (278)
T cd05606          47 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKP  125 (278)
T ss_pred             HHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCH
Confidence            34556667889999999999999999999999999999887654 45689999999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.+++
T Consensus       126 ~nili~~~~~~kl  138 (278)
T cd05606         126 ANILLDEHGHVRI  138 (278)
T ss_pred             HHEEECCCCCEEE
Confidence            9999998887764


No 310
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.68  E-value=3.4e-16  Score=104.36  Aligned_cols=95  Identities=32%  Similarity=0.643  Sum_probs=82.0

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~  117 (134)
                      ...|+..++.++|+|++++++.+..+...++++||++++++..++.. ...+++.....++.|++.++.|+|+ .|++|+
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~  124 (264)
T cd06623          46 LLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKK-VGKIPEPVLAYIARQILKGLDYLHTKRHIIHR  124 (264)
T ss_pred             HHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence            34556666666777777799999999999999999999999988765 3678999999999999999999999 999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       125 ~l~~~ni~~~~~~~~~l  141 (264)
T cd06623         125 DIKPSNLLINSKGEVKI  141 (264)
T ss_pred             CCCHHHEEECCCCCEEE
Confidence            99999999998887653


No 311
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.68  E-value=4.1e-16  Score=104.61  Aligned_cols=94  Identities=40%  Similarity=0.770  Sum_probs=75.9

Q ss_pred             HHHHHHhhC-CCCCccccceeeee------CCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q psy15406         41 LWIDILSDC-KHENIVQLYEAFFT------NGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTH  112 (134)
Q Consensus        41 ~~~~~~~~~-~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~  112 (134)
                      .|+.+++.+ +|+|++++.+.+..      ....|++|||++++++..++... ...+++..+..++.|++.++.|+|+.
T Consensus        51 ~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~  130 (272)
T cd06637          51 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH  130 (272)
T ss_pred             HHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            345555555 46666668877764      24689999999999999887653 24578899999999999999999999


Q ss_pred             CCccCCCCCCCeEEecCCeeeC
Q psy15406        113 RVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       113 ~i~h~dik~~nill~~~~~~~i  134 (134)
                      +++|+|++|+||+++.++.++|
T Consensus       131 ~ivh~dl~~~nili~~~~~~~l  152 (272)
T cd06637         131 KVIHRDIKGQNVLLTENAEVKL  152 (272)
T ss_pred             CCccCCCCHHHEEECCCCCEEE
Confidence            9999999999999998887764


No 312
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.68  E-value=2.9e-16  Score=105.52  Aligned_cols=83  Identities=31%  Similarity=0.564  Sum_probs=70.2

Q ss_pred             CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCC
Q psy15406         51 HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus        51 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~  130 (134)
                      |+|++++++.+..+...+++||+++++++.+.+.. ...+++.....++.|++.++.++|+.|++|+|++|+||+++.++
T Consensus        61 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~  139 (280)
T cd05581          61 HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK-YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM  139 (280)
T ss_pred             CCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence            44444455566667789999999999999988765 35789999999999999999999999999999999999999888


Q ss_pred             eeeC
Q psy15406        131 GVKL  134 (134)
Q Consensus       131 ~~~i  134 (134)
                      .+++
T Consensus       140 ~~~l  143 (280)
T cd05581         140 HIKI  143 (280)
T ss_pred             CEEe
Confidence            7653


No 313
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.68  E-value=6.9e-16  Score=102.48  Aligned_cols=93  Identities=35%  Similarity=0.544  Sum_probs=75.4

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      |+.+++.++|+|++++.+.+..+...++++|+++++++..++...   ...+++..+..++.+++.++.|+|+.|++|+|
T Consensus        49 e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~  128 (256)
T cd08530          49 EIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRD  128 (256)
T ss_pred             HHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            444555555555555777777778899999999999998876542   24578888999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.+++
T Consensus       129 l~~~ni~~~~~~~~kl  144 (256)
T cd08530         129 LKSANILLVANDLVKI  144 (256)
T ss_pred             CCcceEEEecCCcEEE
Confidence            9999999998876653


No 314
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.68  E-value=3.8e-16  Score=105.28  Aligned_cols=95  Identities=21%  Similarity=0.332  Sum_probs=76.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeee-CCEEEEEEeccCCCCHHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT-NGKLWMLIEYCDGGAVDSIMLELE-------KPLTEQQIRYICHYMCKALQFLHT  111 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lh~  111 (134)
                      ..|+.+++.++|+|++++++.+.. +...++++++++++++..++....       ..+++.....++.+++.|+.|+|+
T Consensus        56 ~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~  135 (280)
T cd05043          56 LQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK  135 (280)
T ss_pred             HHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344555555666666668887665 467899999999999988875432       347888999999999999999999


Q ss_pred             CCCccCCCCCCCeEEecCCeeeC
Q psy15406        112 HRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+++|+|++|+|++++.++.+++
T Consensus       136 ~~i~H~di~p~nil~~~~~~~kl  158 (280)
T cd05043         136 RGVIHKDIAARNCVIDEELQVKI  158 (280)
T ss_pred             CCEeecccCHhhEEEcCCCcEEE
Confidence            99999999999999988877764


No 315
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.68  E-value=4.5e-16  Score=103.18  Aligned_cols=96  Identities=33%  Similarity=0.543  Sum_probs=81.7

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      ....|++++++++|+|++++++.+...  ...++++|+++++++.+++... ..+++.....++.+++.++.|+|+.|++
T Consensus        45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~  123 (260)
T cd06606          45 ALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQILEGLAYLHSNGIV  123 (260)
T ss_pred             HHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            334556666666777777799888887  8899999999999999887653 4788999999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      |+|++|+||+++.++.++|
T Consensus       124 h~dl~p~ni~i~~~~~~~l  142 (260)
T cd06606         124 HRDIKGANILVDSDGVVKL  142 (260)
T ss_pred             ccCCCHHHEEEcCCCCEEE
Confidence            9999999999998887764


No 316
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.68  E-value=9.7e-16  Score=102.35  Aligned_cols=97  Identities=35%  Similarity=0.642  Sum_probs=83.2

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE--KPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      ....|+.+++.++|+|++++++.+..+...|+++|+++++++..++....  ..+++..+..++.|++.++.|+|+.|++
T Consensus        45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~  124 (267)
T cd06610          45 ELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQI  124 (267)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            34556677777788888889999999999999999999999998876532  3578899999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      |+|++|+||+++.++.+++
T Consensus       125 h~~l~p~ni~~~~~~~~~l  143 (267)
T cd06610         125 HRDIKAGNILLGEDGSVKI  143 (267)
T ss_pred             cCCCCHHhEEEcCCCCEEE
Confidence            9999999999998877653


No 317
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.67  E-value=5.2e-16  Score=105.35  Aligned_cols=93  Identities=27%  Similarity=0.436  Sum_probs=75.5

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+++++.++|+|++++++.+..+...|++|||+++ ++...+.... ..++...+..++.|++.|+.|+|+++++|+|
T Consensus        49 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~d  127 (294)
T PLN00009         49 IREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRD  127 (294)
T ss_pred             HHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            4567777777888888899999999999999999965 6666554322 2357788888999999999999999999999


Q ss_pred             CCCCCeEEecC-Ceee
Q psy15406        119 LKAGNVLLTMS-GGVK  133 (134)
Q Consensus       119 ik~~nill~~~-~~~~  133 (134)
                      ++|+||+++.+ +.++
T Consensus       128 l~p~nill~~~~~~~k  143 (294)
T PLN00009        128 LKPQNLLIDRRTNALK  143 (294)
T ss_pred             CCcceEEEECCCCEEE
Confidence            99999999854 4454


No 318
>KOG0669|consensus
Probab=99.67  E-value=1.7e-16  Score=104.06  Aligned_cols=106  Identities=26%  Similarity=0.473  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCC
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKP   89 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~   89 (134)
                      ....+||++++..+.|+|++.+.+...+.+.           |       .....+.+|+||.+|+. +|..++.+....
T Consensus        60 pitalreikiL~~lkHenv~nliEic~tk~T-----------p-------~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr  120 (376)
T KOG0669|consen   60 PITALREIKILQLLKHENVVNLIEICRTKAT-----------P-------TNRDRATFYLVFDFCEH-DLAGLLSNRKVR  120 (376)
T ss_pred             cHHHHHHHHHHHHhcchhHHHHHHHHhhccC-----------C-------cccccceeeeeHHHhhh-hHHHHhcCcccc
Confidence            3456788888888888888876554433221           1       11134679999999987 666677665567


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         90 LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        90 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++...+..++.++..|+.|+|.+.++|||+||+|++++.+|.+++
T Consensus       121 ~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilkl  165 (376)
T KOG0669|consen  121 FSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKL  165 (376)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEe
Confidence            899999999999999999999999999999999999999998875


No 319
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.67  E-value=1.1e-15  Score=100.99  Aligned_cols=97  Identities=42%  Similarity=0.848  Sum_probs=84.6

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ....|+.+++.++|++++++.+.+..+...++++|+++++++.+++......+++.....++.+++.++.++|..|++|+
T Consensus        43 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~  122 (253)
T cd05122          43 KIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHR  122 (253)
T ss_pred             HHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecC
Confidence            44556777777778888889999999999999999999999998876644578899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.++|
T Consensus       123 dl~p~ni~i~~~~~~~l  139 (253)
T cd05122         123 DIKAANILLTSDGEVKL  139 (253)
T ss_pred             CCCHHHEEEccCCeEEE
Confidence            99999999998887764


No 320
>KOG1152|consensus
Probab=99.66  E-value=1.8e-16  Score=113.43  Aligned_cols=95  Identities=27%  Similarity=0.443  Sum_probs=84.5

Q ss_pred             hHHHHHHHhhCC---CCCccccceeeeeCCEEEEEEeccCCC-CHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         39 GKLWIDILSDCK---HENIVQLYEAFFTNGKLWMLIEYCDGG-AVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        39 ~~~~~~~~~~~~---h~~i~~~~~~~~~~~~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      .+.||.||++++   |+||+++.++|.++++.|+.||....| .|.+++ +....+.+..+..++.|++.|++++|+.||
T Consensus       613 Vp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~I-E~kp~m~E~eAk~IFkQV~agi~hlh~~~i  691 (772)
T KOG1152|consen  613 VPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFI-EFKPRMDEPEAKLIFKQVVAGIKHLHDQGI  691 (772)
T ss_pred             cchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhh-hccCccchHHHHHHHHHHHhccccccccCc
Confidence            467899999997   999999999999999999999987654 345554 445778999999999999999999999999


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +|||||-+|++++.+|.+|+
T Consensus       692 vhrdikdenvivd~~g~~kl  711 (772)
T KOG1152|consen  692 VHRDIKDENVIVDSNGFVKL  711 (772)
T ss_pred             eecccccccEEEecCCeEEE
Confidence            99999999999999999875


No 321
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.66  E-value=4.2e-16  Score=108.95  Aligned_cols=89  Identities=22%  Similarity=0.442  Sum_probs=66.3

Q ss_pred             HHHHHhhCCCCCccccceeeee------CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         42 WIDILSDCKHENIVQLYEAFFT------NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      |+.+++.++|+|++++++.+..      ....|++|||+++ .+...+.   ..++...+..++.|++.|+.|+|++|++
T Consensus        73 E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~iv  148 (364)
T cd07875          73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGII  148 (364)
T ss_pred             HHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHH---hcCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence            3444444444444445555432      2457999999976 4554443   3577888889999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      ||||||+||+++.++.++|
T Consensus       149 H~Dlkp~NIll~~~~~~kL  167 (364)
T cd07875         149 HRDLKPSNIVVKSDCTLKI  167 (364)
T ss_pred             cCCCCHHHEEECCCCcEEE
Confidence            9999999999998888764


No 322
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.66  E-value=9.1e-16  Score=103.68  Aligned_cols=95  Identities=38%  Similarity=0.726  Sum_probs=77.8

Q ss_pred             HHHHHHHhhC-CCCCccccceeee-----eCCEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFF-----TNGKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      ..|+.+++.+ +|+|++++++.+.     .+...+++|||+++++|..++..   ....+++..+..++.|++.++.|+|
T Consensus        62 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  141 (286)
T cd06638          62 EAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH  141 (286)
T ss_pred             HHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH
Confidence            3466667777 5888888888774     34578999999999999877642   2245788888999999999999999


Q ss_pred             HCCCccCCCCCCCeEEecCCeeeC
Q psy15406        111 THRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.+++|+|++|+||+++.++.+++
T Consensus       142 ~~~i~H~dlkp~nili~~~~~~kl  165 (286)
T cd06638         142 VNKTIHRDVKGNNILLTTEGGVKL  165 (286)
T ss_pred             hCCccccCCCHHhEEECCCCCEEE
Confidence            999999999999999998887654


No 323
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.66  E-value=4.8e-16  Score=104.68  Aligned_cols=93  Identities=30%  Similarity=0.561  Sum_probs=74.8

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      .|+.+++.++|+|++++++.+..+...++++||+++ ++...+......++...+..++.+++.++.|+|+.+++|+|++
T Consensus        47 ~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~  125 (283)
T cd05118          47 REIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLK  125 (283)
T ss_pred             HHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcC
Confidence            344555555555555577777777889999999976 6766665544678899999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.+++
T Consensus       126 p~nili~~~~~~~l  139 (283)
T cd05118         126 PENLLINTEGVLKL  139 (283)
T ss_pred             HHHEEECCCCcEEE
Confidence            99999998887764


No 324
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.66  E-value=8.6e-16  Score=109.98  Aligned_cols=93  Identities=26%  Similarity=0.409  Sum_probs=71.7

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC--------CEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHH
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN--------GKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      +|+.+++.++|+|++++++.+...        ..++++|||+++ ++...+..   ....++...+..++.|++.|+.|+
T Consensus       108 ~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL  186 (440)
T PTZ00036        108 RELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI  186 (440)
T ss_pred             HHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            467777777777777777765432        257899999986 45444432   245688999999999999999999


Q ss_pred             HHCCCccCCCCCCCeEEecCC-eeeC
Q psy15406        110 HTHRVIHRDLKAGNVLLTMSG-GVKL  134 (134)
Q Consensus       110 h~~~i~h~dik~~nill~~~~-~~~i  134 (134)
                      |+.|++||||||+||+++.++ .+||
T Consensus       187 H~~~IiHrDLKp~NILl~~~~~~vkL  212 (440)
T PTZ00036        187 HSKFICHRDLKPQNLLIDPNTHTLKL  212 (440)
T ss_pred             HHCCEecCCcCHHHEEEcCCCCceee
Confidence            999999999999999998654 4654


No 325
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.66  E-value=5.5e-16  Score=105.68  Aligned_cols=92  Identities=32%  Similarity=0.596  Sum_probs=72.0

Q ss_pred             HHHHHhhCCCCCccccceeeeeC--------CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTN--------GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHR  113 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~  113 (134)
                      |+.+++.++|||++++++.+...        ...+++|||+++ ++...+......+++..+..++.|++.|+.|+|++|
T Consensus        61 e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  139 (310)
T cd07865          61 EIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK  139 (310)
T ss_pred             HHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45555555555555577766543        346999999975 666666554446889999999999999999999999


Q ss_pred             CccCCCCCCCeEEecCCeeeC
Q psy15406        114 VIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       114 i~h~dik~~nill~~~~~~~i  134 (134)
                      ++|+|++|+||+++.++.++|
T Consensus       140 i~H~dl~p~nil~~~~~~~kl  160 (310)
T cd07865         140 ILHRDMKAANILITKDGILKL  160 (310)
T ss_pred             eeccCCCHHHEEECCCCcEEE
Confidence            999999999999998887764


No 326
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.66  E-value=1.1e-15  Score=102.53  Aligned_cols=94  Identities=18%  Similarity=0.281  Sum_probs=70.9

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC------CEEEEEEeccCCCCHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHH
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN------GKLWMLIEYCDGGAVDSIMLEL-----EKPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      .|+.+++.++|||++++++.+...      ...+++++|+++|++..++...     ...++......++.|++.++.|+
T Consensus        50 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l  129 (273)
T cd05074          50 REAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYL  129 (273)
T ss_pred             HHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            344444455555555577766532      1347889999999988766432     12467888899999999999999


Q ss_pred             HHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        110 HTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       110 h~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |+.|++|+|+||+||+++.++.+++
T Consensus       130 H~~~i~H~dikp~nili~~~~~~kl  154 (273)
T cd05074         130 SSKNFIHRDLAARNCMLNENMTVCV  154 (273)
T ss_pred             HhCCEeecccchhhEEEcCCCCEEE
Confidence            9999999999999999998887764


No 327
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.66  E-value=5.2e-16  Score=104.61  Aligned_cols=92  Identities=34%  Similarity=0.592  Sum_probs=75.0

Q ss_pred             HHHHHhhCCCCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      |+.+++.++|+|++++++.+...  +..+++++|+++ ++...+......+++.....++.|++.|+.|+|+.|++|+|+
T Consensus        48 e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl  126 (287)
T cd07840          48 EIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDI  126 (287)
T ss_pred             HHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence            44555555555555588888877  789999999975 777766554457889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       127 ~p~nil~~~~~~~~l  141 (287)
T cd07840         127 KGSNILINNDGVLKL  141 (287)
T ss_pred             cHHHeEEcCCCCEEE
Confidence            999999999887764


No 328
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.66  E-value=1.2e-15  Score=101.86  Aligned_cols=88  Identities=26%  Similarity=0.466  Sum_probs=78.5

Q ss_pred             HhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeE
Q psy15406         46 LSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVL  125 (134)
Q Consensus        46 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nil  125 (134)
                      ....+|+|++++++.+..+...|+++||++++++.+++.. ...++...+..++.|++.|+.|+|+.+++|+|++|+||+
T Consensus        51 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil  129 (260)
T cd05611          51 MIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLL  129 (260)
T ss_pred             hhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence            3455899999999999999999999999999999988754 356889999999999999999999999999999999999


Q ss_pred             EecCCeeeC
Q psy15406        126 LTMSGGVKL  134 (134)
Q Consensus       126 l~~~~~~~i  134 (134)
                      ++.++.+++
T Consensus       130 ~~~~~~~~l  138 (260)
T cd05611         130 IDQTGHLKL  138 (260)
T ss_pred             ECCCCcEEE
Confidence            998877654


No 329
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.66  E-value=5.2e-16  Score=112.54  Aligned_cols=93  Identities=25%  Similarity=0.421  Sum_probs=70.7

Q ss_pred             HHHHHhhCCCCCccccceeeeeC--------CEEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTN--------GKLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      |+.++..++|+|+++++..+...        ..++++|||+++|+|.+.+...   ...+++..+..++.|++.++.|+|
T Consensus        81 Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH  160 (496)
T PTZ00283         81 EVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH  160 (496)
T ss_pred             HHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            33444444444444454444321        2368999999999998877542   246788999999999999999999


Q ss_pred             HCCCccCCCCCCCeEEecCCeeeC
Q psy15406        111 THRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.+++||||||+||+++.++.++|
T Consensus       161 ~~~IiHrDLKP~NILl~~~~~vkL  184 (496)
T PTZ00283        161 SKHMIHRDIKSANILLCSNGLVKL  184 (496)
T ss_pred             hCCEecCCCCHHHEEEeCCCCEEE
Confidence            999999999999999999888764


No 330
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.66  E-value=4.7e-16  Score=106.50  Aligned_cols=93  Identities=28%  Similarity=0.524  Sum_probs=71.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHh--------CCCCCHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLEL--------EKPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      .+|+.+++.++|||++++++.+..  +...|+++||+++ ++...+...        ...+++..+..++.|++.|+.|+
T Consensus        46 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l  124 (317)
T cd07867          46 CREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL  124 (317)
T ss_pred             HHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence            456677777777777778888753  5678999999876 555544321        12467888899999999999999


Q ss_pred             HHCCCccCCCCCCCeEEe----cCCeee
Q psy15406        110 HTHRVIHRDLKAGNVLLT----MSGGVK  133 (134)
Q Consensus       110 h~~~i~h~dik~~nill~----~~~~~~  133 (134)
                      |+.|++|||+||+||++.    .++.++
T Consensus       125 H~~~ivH~Dlkp~Nil~~~~~~~~~~~k  152 (317)
T cd07867         125 HANWVLHRDLKPANILVMGEGPERGRVK  152 (317)
T ss_pred             HhCCEEcCCCCHHHEEEccCCCCCCcEE
Confidence            999999999999999993    445554


No 331
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.66  E-value=5.9e-16  Score=105.88  Aligned_cols=94  Identities=28%  Similarity=0.490  Sum_probs=74.5

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLEL----EKPLTEQQIRYICHYMCKALQFLHTHR  113 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~  113 (134)
                      ..|+.+++.++|||++++++.+...  ...+++||++++ ++...+...    ...+++..+..++.|++.++.|+|+.+
T Consensus        50 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  128 (316)
T cd07842          50 CREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW  128 (316)
T ss_pred             HHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456666666667777799988877  789999999976 454444321    125788899999999999999999999


Q ss_pred             CccCCCCCCCeEEec----CCeeeC
Q psy15406        114 VIHRDLKAGNVLLTM----SGGVKL  134 (134)
Q Consensus       114 i~h~dik~~nill~~----~~~~~i  134 (134)
                      ++|+|++|+||+++.    ++.+++
T Consensus       129 i~h~dlkp~Nil~~~~~~~~~~~kl  153 (316)
T cd07842         129 VLHRDLKPANILVMGEGPERGVVKI  153 (316)
T ss_pred             EeeCCCCHHHEEEcCCCCccceEEE
Confidence            999999999999998    776654


No 332
>KOG4257|consensus
Probab=99.66  E-value=7.8e-16  Score=111.38  Aligned_cols=101  Identities=25%  Similarity=0.545  Sum_probs=89.6

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL   86 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   86 (134)
                      ++..+.|+.|..+|++++||||++                          +.+.+. ....|++||+++-|.|..++...
T Consensus       432 ~d~tekflqEa~iMrnfdHphIik--------------------------LIGv~~-e~P~WivmEL~~~GELr~yLq~n  484 (974)
T KOG4257|consen  432 PDDTEKFLQEASIMRNFDHPHIIK--------------------------LIGVCV-EQPMWIVMELAPLGELREYLQQN  484 (974)
T ss_pred             hhhHHHHHHHHHHHHhCCCcchhh--------------------------eeeeee-ccceeEEEecccchhHHHHHHhc
Confidence            556788999999999999999998                          666665 44699999999999999999877


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         87 EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        87 ~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ..+++......+..|+..++.|+++...+||||..+||++.+...+|+
T Consensus       485 k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKL  532 (974)
T KOG4257|consen  485 KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKL  532 (974)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeee
Confidence            788999999999999999999999999999999999999988776664


No 333
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.65  E-value=1.4e-15  Score=103.97  Aligned_cols=93  Identities=33%  Similarity=0.636  Sum_probs=77.5

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      .|+.+++.++|+|++++++.+...  ...+++||++.+ ++..++......+++.....++.|++.++.|+|+.|++|+|
T Consensus        55 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  133 (309)
T cd07845          55 REITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRD  133 (309)
T ss_pred             HHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            466777777777777788888754  568999999975 67776655446688999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+||+++.++.++|
T Consensus       134 l~p~nil~~~~~~~kL  149 (309)
T cd07845         134 LKVSNLLLTDKGCLKI  149 (309)
T ss_pred             CCHHHEEECCCCCEEE
Confidence            9999999998887764


No 334
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.65  E-value=1e-15  Score=116.82  Aligned_cols=89  Identities=33%  Similarity=0.614  Sum_probs=71.9

Q ss_pred             HHHHHHHhhCCCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC--
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFLHTH--  112 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~--  112 (134)
                      ..|+.+++.++||||+++++.|..  ...+|++|||+++++|..++...   ...+++..++.++.|++.|+.|+|..  
T Consensus        60 ~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~  139 (1021)
T PTZ00266         60 VIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKD  139 (1021)
T ss_pred             HHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhccc
Confidence            345556666666666668888764  35699999999999998877542   24689999999999999999999984  


Q ss_pred             -----CCccCCCCCCCeEEec
Q psy15406        113 -----RVIHRDLKAGNVLLTM  128 (134)
Q Consensus       113 -----~i~h~dik~~nill~~  128 (134)
                           +|+|+||||+||++..
T Consensus       140 ~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266        140 GPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             ccccCCceeccCcHHHeEeec
Confidence                 4999999999999964


No 335
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.65  E-value=9.7e-16  Score=102.72  Aligned_cols=96  Identities=28%  Similarity=0.538  Sum_probs=79.7

Q ss_pred             hHHHHHHHhh-CCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHH-CC
Q psy15406         39 GKLWIDILSD-CKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFLHT-HR  113 (134)
Q Consensus        39 ~~~~~~~~~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~-~~  113 (134)
                      ...|+.++.. ++|+|++++++.+..++..+++|||++++++.+++..   ....++....+.++.|++.++.|+|+ .+
T Consensus        55 ~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~  134 (269)
T cd08528          55 IVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR  134 (269)
T ss_pred             HHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc
Confidence            3445555543 5788888899999999999999999999999877643   23467888999999999999999996 68


Q ss_pred             CccCCCCCCCeEEecCCeeeC
Q psy15406        114 VIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       114 i~h~dik~~nill~~~~~~~i  134 (134)
                      ++|+|++|+||+++.++.+++
T Consensus       135 i~H~dl~~~nil~~~~~~~~l  155 (269)
T cd08528         135 IVHRDLTPNNIMLGEDDKVTI  155 (269)
T ss_pred             eeecCCCHHHEEECCCCcEEE
Confidence            999999999999998887764


No 336
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.65  E-value=1.4e-15  Score=102.36  Aligned_cols=97  Identities=36%  Similarity=0.638  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCC
Q psy15406         11 SDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPL   90 (134)
Q Consensus        11 ~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~   90 (134)
                      +.+.+|++++++++|+|+++                          +++.+......++++|++++ ++..++......+
T Consensus        43 ~~~~~e~~~l~~~~~~~i~~--------------------------~~~~~~~~~~~~~v~e~~~~-~l~~~i~~~~~~~   95 (282)
T cd07829          43 STALREISLLKELKHPNIVK--------------------------LLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPL   95 (282)
T ss_pred             HHHHHHHHHHHhcCCCCHHH--------------------------HHhhhhcCCceEEEecCcCc-CHHHHHHhhccCC
Confidence            34555666666666666665                          55566666789999999985 7888876644578


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         91 TEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        91 ~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +......++.+++.++.++|+.|++|+|++|+||+++.++.++|
T Consensus        96 ~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l  139 (282)
T cd07829          96 SPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKL  139 (282)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEE
Confidence            89999999999999999999999999999999999998887764


No 337
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.65  E-value=6.1e-16  Score=106.97  Aligned_cols=90  Identities=28%  Similarity=0.600  Sum_probs=67.9

Q ss_pred             HHHHhhCCCCCccccceeee----eCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         43 IDILSDCKHENIVQLYEAFF----TNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      +.+++.++|+|++++++.+.    .....++++||+. +++...+.. ...+++..+..++.|++.|+.|+|+.|++|+|
T Consensus        55 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  132 (334)
T cd07855          55 LKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRD  132 (334)
T ss_pred             HHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            33333444444444444443    2356899999996 477766543 45689999999999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +||+||+++.++.++|
T Consensus       133 lkp~Nil~~~~~~~kl  148 (334)
T cd07855         133 LKPSNLLVNEDCELRI  148 (334)
T ss_pred             CCHHHEEEcCCCcEEe
Confidence            9999999999888764


No 338
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.65  E-value=1.2e-15  Score=102.47  Aligned_cols=83  Identities=25%  Similarity=0.421  Sum_probs=76.2

Q ss_pred             CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         50 KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      +|+|++++++.+......|++|||+++++|..++... ..+++..+..++.|++.++.|+|+.|++|+|++|+|++++.+
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~  145 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA  145 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC
Confidence            6999999999999999999999999999999887653 478999999999999999999999999999999999999887


Q ss_pred             C-eee
Q psy15406        130 G-GVK  133 (134)
Q Consensus       130 ~-~~~  133 (134)
                      + .++
T Consensus       146 ~~~~~  150 (267)
T PHA03390        146 KDRIY  150 (267)
T ss_pred             CCeEE
Confidence            7 554


No 339
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.65  E-value=1.1e-15  Score=103.09  Aligned_cols=92  Identities=30%  Similarity=0.516  Sum_probs=74.1

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLK  120 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik  120 (134)
                      |+++++.++|+|++++++.+..+...|+++||++ +++..++.... ..+++.....++.|++.++.|+|+.+++|+|++
T Consensus        48 E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~  126 (283)
T cd07835          48 EISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLK  126 (283)
T ss_pred             HHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence            4455555555555557778888889999999995 57877765432 357899999999999999999999999999999


Q ss_pred             CCCeEEecCCeeeC
Q psy15406        121 AGNVLLTMSGGVKL  134 (134)
Q Consensus       121 ~~nill~~~~~~~i  134 (134)
                      |+||+++.++.+++
T Consensus       127 p~nil~~~~~~~~l  140 (283)
T cd07835         127 PQNLLIDREGALKL  140 (283)
T ss_pred             HHHEEEcCCCcEEE
Confidence            99999998887764


No 340
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.64  E-value=2.3e-15  Score=100.46  Aligned_cols=83  Identities=31%  Similarity=0.572  Sum_probs=65.7

Q ss_pred             HhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q psy15406         46 LSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAG  122 (134)
Q Consensus        46 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~  122 (134)
                      ++.++|||++++++.+......++++||++++++...+..   ....+++.....++.|++.++.|+|+.|++|+|++|+
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~  135 (260)
T cd08222          56 LSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAK  135 (260)
T ss_pred             HHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChh
Confidence            3333333333355555666778999999999999887653   2346789999999999999999999999999999999


Q ss_pred             CeEEec
Q psy15406        123 NVLLTM  128 (134)
Q Consensus       123 nill~~  128 (134)
                      |++++.
T Consensus       136 nili~~  141 (260)
T cd08222         136 NIFLKN  141 (260)
T ss_pred             heEeec
Confidence            999974


No 341
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.64  E-value=1.4e-15  Score=102.67  Aligned_cols=94  Identities=41%  Similarity=0.785  Sum_probs=75.2

Q ss_pred             HHHHHHhhC-CCCCccccceeeee------CCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q psy15406         41 LWIDILSDC-KHENIVQLYEAFFT------NGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTH  112 (134)
Q Consensus        41 ~~~~~~~~~-~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~  112 (134)
                      .|+.+++.+ +|+|++++++.+..      ....|++|||+++|++..++... ...+++..+..++.|++.++.|+|+.
T Consensus        61 ~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~  140 (282)
T cd06636          61 LEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH  140 (282)
T ss_pred             HHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            345555555 46777777777642      45789999999999998877542 23477888889999999999999999


Q ss_pred             CCccCCCCCCCeEEecCCeeeC
Q psy15406        113 RVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       113 ~i~h~dik~~nill~~~~~~~i  134 (134)
                      |++|+|++|+||+++.++.++|
T Consensus       141 ~ivH~dl~~~nili~~~~~~~l  162 (282)
T cd06636         141 KVIHRDIKGQNVLLTENAEVKL  162 (282)
T ss_pred             CcccCCCCHHHEEECCCCCEEE
Confidence            9999999999999998887654


No 342
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.64  E-value=1.5e-15  Score=103.27  Aligned_cols=92  Identities=29%  Similarity=0.505  Sum_probs=71.0

Q ss_pred             HHHHHhhCCCCCccccceeeeeC----------CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTN----------GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT  111 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~----------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~  111 (134)
                      |+.+++.++|||++++++.+...          +..++++||+++ .+...+......+++..+..++.|++.|+.|+|+
T Consensus        56 e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  134 (302)
T cd07864          56 EIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHK  134 (302)
T ss_pred             HHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            44455555555555566555443          378999999987 5555554434468899999999999999999999


Q ss_pred             CCCccCCCCCCCeEEecCCeeeC
Q psy15406        112 HRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .|++|+|++|+||+++.++.++|
T Consensus       135 ~~i~H~dl~p~nili~~~~~~kl  157 (302)
T cd07864         135 KNFLHRDIKCSNILLNNKGQIKL  157 (302)
T ss_pred             CCeecCCCCHHHEEECCCCcEEe
Confidence            99999999999999998887764


No 343
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.64  E-value=2.2e-15  Score=104.53  Aligned_cols=112  Identities=24%  Similarity=0.487  Sum_probs=83.9

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL   86 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   86 (134)
                      ....+.+.+|++++++++|||++++++.+.....            +...-.+.+......|+++||+++ ++...+.. 
T Consensus        43 ~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-  108 (342)
T cd07854          43 PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGS------------DLTEDVGSLTELNSVYIVQEYMET-DLANVLEQ-  108 (342)
T ss_pred             CchHHHHHHHHHHHHhcCCCcchhhHhhhccccc------------ccccccccccccceEEEEeecccc-cHHHHHHc-
Confidence            3455678889999999999999998776544321            111112234445678999999974 77666543 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC-Ceee
Q psy15406         87 EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS-GGVK  133 (134)
Q Consensus        87 ~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~-~~~~  133 (134)
                       ..+++..+..++.|++.|+.|+|+.|++|+|+||+|++++.+ +.++
T Consensus       109 -~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~k  155 (342)
T cd07854         109 -GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEE
Confidence             468899999999999999999999999999999999999744 4443


No 344
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.64  E-value=3.1e-15  Score=101.43  Aligned_cols=95  Identities=41%  Similarity=0.751  Sum_probs=79.5

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeC-----CEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTN-----GKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      ..|+.+++.+ +|+|++++++.+...     +..|+++||++++++..++..   ....+++.....++.|++.++.|+|
T Consensus        66 ~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH  145 (291)
T cd06639          66 EAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH  145 (291)
T ss_pred             HHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4566777777 688888899988753     358999999999999877642   2346788999999999999999999


Q ss_pred             HCCCccCCCCCCCeEEecCCeeeC
Q psy15406        111 THRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.|++|+|++|+|++++.++.+++
T Consensus       146 ~~~ivH~dlkp~nili~~~~~~kl  169 (291)
T cd06639         146 NNRIIHRDVKGNNILLTTEGGVKL  169 (291)
T ss_pred             hCCeeccCCCHHHEEEcCCCCEEE
Confidence            999999999999999998887764


No 345
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.64  E-value=2.4e-15  Score=102.02  Aligned_cols=93  Identities=29%  Similarity=0.434  Sum_probs=71.7

Q ss_pred             HHHHHHhhCC-CCCccccceeeeeCCE-----EEEEEeccCCCCHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         41 LWIDILSDCK-HENIVQLYEAFFTNGK-----LWMLIEYCDGGAVDSIMLELE----KPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        41 ~~~~~~~~~~-h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      .|+.+++.+. |+|++++++.+.....     .|++|||+++ ++..++....    ..+++..+..++.|++.++.|+|
T Consensus        49 ~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH  127 (295)
T cd07837          49 REISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH  127 (295)
T ss_pred             HHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3455555553 4566667777776554     8999999986 6766664422    34789999999999999999999


Q ss_pred             HCCCccCCCCCCCeEEec-CCeeeC
Q psy15406        111 THRVIHRDLKAGNVLLTM-SGGVKL  134 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~-~~~~~i  134 (134)
                      +.|++|+|++|+||+++. ++.+++
T Consensus       128 ~~~i~H~dl~~~nil~~~~~~~~kl  152 (295)
T cd07837         128 KHGVMHRDLKPQNLLVDKQKGLLKI  152 (295)
T ss_pred             HCCeeecCCChHHEEEecCCCeEEE
Confidence            999999999999999987 676653


No 346
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.64  E-value=1.6e-15  Score=105.38  Aligned_cols=91  Identities=27%  Similarity=0.575  Sum_probs=70.6

Q ss_pred             HHHHHHhhCCCCCccccceeeeeCC------EEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTNG------KLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      .|+.+++.++|+|++++.+.+..+.      ..+++++++ ++++..+...  ..+++..+..++.|++.|+.|+|+.|+
T Consensus        63 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi  139 (343)
T cd07880          63 RELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGI  139 (343)
T ss_pred             HHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3455555555555555666665432      358999998 6678776543  568899999999999999999999999


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +|+|++|+||+++.++.+++
T Consensus       140 ~H~dlkp~Nill~~~~~~kl  159 (343)
T cd07880         140 IHRDLKPGNLAVNEDCELKI  159 (343)
T ss_pred             ecCCCCHHHEEEcCCCCEEE
Confidence            99999999999998887764


No 347
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.64  E-value=1.9e-15  Score=104.58  Aligned_cols=91  Identities=33%  Similarity=0.547  Sum_probs=73.7

Q ss_pred             HHHHHHhhC-CCCCccccceeeee--CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         41 LWIDILSDC-KHENIVQLYEAFFT--NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        41 ~~~~~~~~~-~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      .|+.+++++ +|+|++++++.+..  ....|++||++++ ++...+..  ..+.+.....++.|++.++.|+|+.|++|+
T Consensus        55 ~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~  131 (337)
T cd07852          55 REIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNVIHR  131 (337)
T ss_pred             HHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence            456666666 66777778887764  3468999999975 77776643  367888888899999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++.++.+++
T Consensus       132 dl~p~nill~~~~~~kl  148 (337)
T cd07852         132 DLKPSNILLNSDCRVKL  148 (337)
T ss_pred             CCCHHHEEEcCCCcEEE
Confidence            99999999999987764


No 348
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.63  E-value=2.4e-15  Score=103.99  Aligned_cols=93  Identities=24%  Similarity=0.416  Sum_probs=80.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+++++.++|+|++++++.+..+...+++||++.+ ++...+.. ...++......++.|++.++.|+|+.|++|+|+
T Consensus        68 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl  145 (335)
T PTZ00024         68 LRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDL  145 (335)
T ss_pred             HHHHHHHHhCCCcceeeeeEEEecCCcEEEEEecccc-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            4567777788888888899999999999999999974 77776643 456889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       146 ~~~nill~~~~~~kl  160 (335)
T PTZ00024        146 SPANIFINSKGICKI  160 (335)
T ss_pred             cHHHeEECCCCCEEE
Confidence            999999998887754


No 349
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.63  E-value=1.2e-15  Score=105.62  Aligned_cols=90  Identities=27%  Similarity=0.507  Sum_probs=67.8

Q ss_pred             HHHHHhhCCCCCccccceeeee-----CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         42 WIDILSDCKHENIVQLYEAFFT-----NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      |+.+++.++|+|++++++.+..     ....|+++|++++ ++...+.  ...+++..+..++.|++.|+.|+|+.|++|
T Consensus        53 E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH  129 (336)
T cd07849          53 EIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSANVLH  129 (336)
T ss_pred             HHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            3444444444444445554432     2458999999975 6666553  356889999999999999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      +|+||+||+++.++.++|
T Consensus       130 ~dlkp~Nill~~~~~~kl  147 (336)
T cd07849         130 RDLKPSNLLLNTNCDLKI  147 (336)
T ss_pred             cCCCHHHEEECCCCCEEE
Confidence            999999999998887764


No 350
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.63  E-value=2.1e-15  Score=105.06  Aligned_cols=90  Identities=22%  Similarity=0.438  Sum_probs=69.9

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC------CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN------GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      .|+.+++.++|+|++++++.+...      ...|++||++.+ ++...+..   .++......++.|++.|+.|+|..|+
T Consensus        64 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi  139 (353)
T cd07850          64 RELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGI  139 (353)
T ss_pred             HHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            355555555666666677666532      357999999975 66655532   37888889999999999999999999


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +|+|+||+||+++.++.+++
T Consensus       140 ~H~dlkp~Nil~~~~~~~kL  159 (353)
T cd07850         140 IHRDLKPSNIVVKSDCTLKI  159 (353)
T ss_pred             eeCCCCHHHEEECCCCCEEE
Confidence            99999999999999887764


No 351
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.63  E-value=2.3e-15  Score=101.82  Aligned_cols=85  Identities=32%  Similarity=0.514  Sum_probs=69.4

Q ss_pred             CCCCCccccceeeee-----CCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q psy15406         49 CKHENIVQLYEAFFT-----NGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAG  122 (134)
Q Consensus        49 ~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~  122 (134)
                      ++|+|++++++.+..     ....++++|++++ ++..++.... ..+++..+..++.|++.|+.|+|+.|++|+|+||+
T Consensus        59 ~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~  137 (288)
T cd07863          59 FDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE  137 (288)
T ss_pred             cCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence            457777778877653     3458999999985 6766665432 34789999999999999999999999999999999


Q ss_pred             CeEEecCCeeeC
Q psy15406        123 NVLLTMSGGVKL  134 (134)
Q Consensus       123 nill~~~~~~~i  134 (134)
                      ||+++.++.++|
T Consensus       138 Nili~~~~~~kl  149 (288)
T cd07863         138 NILVTSGGQVKL  149 (288)
T ss_pred             HEEECCCCCEEE
Confidence            999998887764


No 352
>KOG0690|consensus
Probab=99.63  E-value=1.9e-16  Score=107.12  Aligned_cols=94  Identities=29%  Similarity=0.512  Sum_probs=84.6

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      -.|-..++..+||++..+.-+|++.+.+|+||||..||.|...+. +.+.+++..++.+...|+.++.|+|+.+|+.||+
T Consensus       216 lTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLs-rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDl  294 (516)
T KOG0690|consen  216 LTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLS-RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDL  294 (516)
T ss_pred             hhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehh-hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeec
Confidence            345677888899999999999999999999999999999876653 3577999999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      |.+|++++.+|.+||
T Consensus       295 KLENLlLDkDGHIKi  309 (516)
T KOG0690|consen  295 KLENLLLDKDGHIKI  309 (516)
T ss_pred             hhhhheeccCCceEe
Confidence            999999999999986


No 353
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.63  E-value=1.4e-15  Score=104.76  Aligned_cols=103  Identities=26%  Similarity=0.507  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK   88 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~   88 (134)
                      ..+.+.+|+.+++.++|+|++++.+.+....                     .......|++|+++++ ++...+.. ..
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---------------------~~~~~~~~lv~e~~~~-~l~~~l~~-~~   98 (330)
T cd07834          42 DAKRILREIKLLRHLRHENIIGLLDILRPPS---------------------PEDFNDVYIVTELMET-DLHKVIKS-PQ   98 (330)
T ss_pred             hhhhHHHHHHHHHhcCCcchhhhhhhhcccC---------------------cccccceEEEecchhh-hHHHHHhC-CC
Confidence            4456777777777777777777554432210                     0111368999999985 67666643 34


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         89 PLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        89 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+++..+..++.+++.++.|+|+.|++|+|+||+||+++.++.+++
T Consensus        99 ~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L  144 (330)
T cd07834          99 PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKI  144 (330)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEE
Confidence            7889999999999999999999999999999999999998887764


No 354
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.63  E-value=3.9e-15  Score=100.30  Aligned_cols=92  Identities=28%  Similarity=0.476  Sum_probs=76.5

Q ss_pred             HHHHHHhhCC-CCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         41 LWIDILSDCK-HENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        41 ~~~~~~~~~~-h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      .|+.++.++. |+|++++++.+.++  +..++++||+++ ++...+......+++..+..++.|++.|+.|+|+.|++|+
T Consensus        46 ~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~  124 (282)
T cd07831          46 REIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHR  124 (282)
T ss_pred             HHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence            3556666664 78888899999877  889999999975 6666665544568899999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |++|+||+++. +.++|
T Consensus       125 dl~p~ni~l~~-~~~kl  140 (282)
T cd07831         125 DIKPENILIKD-DILKL  140 (282)
T ss_pred             ccCHHHEEEcC-CCeEE
Confidence            99999999988 76653


No 355
>KOG0667|consensus
Probab=99.63  E-value=9.5e-16  Score=110.41  Aligned_cols=102  Identities=25%  Similarity=0.381  Sum_probs=85.3

Q ss_pred             HHHHHHHhchHHHHHHHhhCC-C-----CCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHH
Q psy15406         30 QLYEAFFTNGKLWIDILSDCK-H-----ENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYM  102 (134)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~-h-----~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i  102 (134)
                      +--..|.+.+..|+.||..++ |     -|++.++++|....++|+|+|.+.. +|++++.... ..++...++.+..|+
T Consensus       220 KN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qi  298 (586)
T KOG0667|consen  220 KNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQI  298 (586)
T ss_pred             ccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence            334556667777888888776 3     3899999999999999999999866 7888876543 467899999999999


Q ss_pred             HHHHHHHHHCCCccCCCCCCCeEEecCCee
Q psy15406        103 CKALQFLHTHRVIHRDLKAGNVLLTMSGGV  132 (134)
Q Consensus       103 ~~~l~~lh~~~i~h~dik~~nill~~~~~~  132 (134)
                      +.++.+||..||+|+|+||+|||+..-++.
T Consensus       299 l~~L~~L~~l~IIHcDLKPENILL~~~~r~  328 (586)
T KOG0667|consen  299 LTALLFLHELGIIHCDLKPENILLKDPKRS  328 (586)
T ss_pred             HHHHHHHHhCCeeeccCChhheeeccCCcC
Confidence            999999999999999999999999755443


No 356
>KOG0986|consensus
Probab=99.62  E-value=3.4e-16  Score=109.41  Aligned_cols=96  Identities=28%  Similarity=0.393  Sum_probs=85.0

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      +-.|-.|+..++.++||.+--.|.+++.+|+|+..+.||+|.-.+.+. +..+++..+..++.+|+.|+.++|..+|+.|
T Consensus       232 aLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYR  311 (591)
T KOG0986|consen  232 ALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYR  311 (591)
T ss_pred             hhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeec
Confidence            344567788888889999999999999999999999999997665553 3578999999999999999999999999999


Q ss_pred             CCCCCCeEEecCCeeeC
Q psy15406        118 DLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 dik~~nill~~~~~~~i  134 (134)
                      |+||+||++|+.|.++|
T Consensus       312 DLKPeNILLDd~GhvRI  328 (591)
T KOG0986|consen  312 DLKPENILLDDHGHVRI  328 (591)
T ss_pred             cCChhheeeccCCCeEe
Confidence            99999999999999875


No 357
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.62  E-value=3.4e-15  Score=100.71  Aligned_cols=92  Identities=35%  Similarity=0.542  Sum_probs=74.8

Q ss_pred             HHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         42 WIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        42 ~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      |+..++.++ |+|++.+++.+..++..+++||++ ++++...+.... ..+++..+..++.|++.++.|+|++|++|+|+
T Consensus        47 e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl  125 (283)
T cd07830          47 EVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDL  125 (283)
T ss_pred             HHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            445555555 666666777777788899999999 667877765532 46789999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      +|+||+++.++.+++
T Consensus       126 ~~~ni~i~~~~~~~l  140 (283)
T cd07830         126 KPENLLVSGPEVVKI  140 (283)
T ss_pred             ChhhEEEcCCCCEEE
Confidence            999999998887764


No 358
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.62  E-value=3.1e-15  Score=103.37  Aligned_cols=92  Identities=26%  Similarity=0.532  Sum_probs=74.6

Q ss_pred             HHHHHHHhhCCCCCccccceeeee-CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT-NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.+++.++|||++++.+++.. ....++++|++. +++..++..  ..++......++.|++.++.|+|+.|++|+|
T Consensus        57 ~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~d  133 (328)
T cd07856          57 YRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRD  133 (328)
T ss_pred             HHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            346666677777777778888865 457899999984 577776543  4578888888999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      ++|+|++++.++.+++
T Consensus       134 l~p~Nili~~~~~~~l  149 (328)
T cd07856         134 LKPSNILINENCDLKI  149 (328)
T ss_pred             CCHHHEeECCCCCEEe
Confidence            9999999998887664


No 359
>KOG0604|consensus
Probab=99.62  E-value=1.4e-15  Score=101.67  Aligned_cols=92  Identities=24%  Similarity=0.396  Sum_probs=77.7

Q ss_pred             chHHHHHHHhhC-CCCCccccceeeee----CCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHH
Q psy15406         38 NGKLWIDILSDC-KHENIVQLYEAFFT----NGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHT  111 (134)
Q Consensus        38 ~~~~~~~~~~~~-~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~  111 (134)
                      ++.+|+++.-.. .|+||+++.+.|..    ...+.+|||.++||.|.+.+.+.+ ..+.+..+..++.||..++.|+|+
T Consensus       100 KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~  179 (400)
T KOG0604|consen  100 KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS  179 (400)
T ss_pred             HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh
Confidence            356777777665 49999999988864    345789999999999999887643 348999999999999999999999


Q ss_pred             CCCccCCCCCCCeEEecC
Q psy15406        112 HRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~  129 (134)
                      ..|.|||+||+|++...+
T Consensus       180 ~nIAHRDlKpENLLyt~t  197 (400)
T KOG0604|consen  180 MNIAHRDLKPENLLYTTT  197 (400)
T ss_pred             cchhhccCChhheeeecC
Confidence            999999999999998644


No 360
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.61  E-value=2.4e-15  Score=104.83  Aligned_cols=83  Identities=23%  Similarity=0.246  Sum_probs=58.3

Q ss_pred             HHHHHHHhhCCCCCccc-cceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQ-LYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~-~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      .+|+++++.++|+|++. +++    .+..|++|||+++++|...  .   ...   ...++.+++.++.|+|+.|++|||
T Consensus        69 ~~E~~iL~~L~h~~iv~~l~~----~~~~~LVmE~~~G~~L~~~--~---~~~---~~~~~~~i~~aL~~lH~~gIiHrD  136 (365)
T PRK09188         69 AREIRALKTVRGIGVVPQLLA----TGKDGLVRGWTEGVPLHLA--R---PHG---DPAWFRSAHRALRDLHRAGITHND  136 (365)
T ss_pred             HHHHHHHHhccCCCCCcEEEE----cCCcEEEEEccCCCCHHHh--C---ccc---hHHHHHHHHHHHHHHHHCCCeeCC
Confidence            34444444444444442 332    2457999999999888622  1   111   135678899999999999999999


Q ss_pred             C-CCCCeEEecCCeeeC
Q psy15406        119 L-KAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 i-k~~nill~~~~~~~i  134 (134)
                      + ||+||+++.++.++|
T Consensus       137 L~KP~NILv~~~~~ikL  153 (365)
T PRK09188        137 LAKPQNWLMGPDGEAAV  153 (365)
T ss_pred             CCCcceEEEcCCCCEEE
Confidence            9 999999988777654


No 361
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.61  E-value=2.5e-15  Score=116.18  Aligned_cols=90  Identities=22%  Similarity=0.335  Sum_probs=80.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCCcc
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLH---THRVIH  116 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h  116 (134)
                      ..|++.+++++||||+++++++..+...|++|||+++|++.+++.    .+++.....++.+++.|+.|+|   +.+++|
T Consensus       731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH  806 (968)
T PLN00113        731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVV  806 (968)
T ss_pred             HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeec
Confidence            346888999999999999999999999999999999999998874    3778888899999999999999   668999


Q ss_pred             CCCCCCCeEEecCCeee
Q psy15406        117 RDLKAGNVLLTMSGGVK  133 (134)
Q Consensus       117 ~dik~~nill~~~~~~~  133 (134)
                      ||+||+||+++.++..+
T Consensus       807 ~dlkp~Nil~~~~~~~~  823 (968)
T PLN00113        807 GNLSPEKIIIDGKDEPH  823 (968)
T ss_pred             CCCCHHhEEECCCCceE
Confidence            99999999998776553


No 362
>KOG4236|consensus
Probab=99.61  E-value=3.5e-15  Score=106.51  Aligned_cols=91  Identities=27%  Similarity=0.429  Sum_probs=81.6

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.|++.+.||+|+.+-..|.+...+++|||.+.|.-|.-++.+..+.+++.....++.||+.++.|+|..+|+|+|
T Consensus       610 lR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCD  689 (888)
T KOG4236|consen  610 LRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCD  689 (888)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeecc
Confidence            45678999999999999999999999999999999987666666666678899999999999999999999999999999


Q ss_pred             CCCCCeEEecC
Q psy15406        119 LKAGNVLLTMS  129 (134)
Q Consensus       119 ik~~nill~~~  129 (134)
                      +||+|+++.+.
T Consensus       690 LKPENVLLas~  700 (888)
T KOG4236|consen  690 LKPENVLLASA  700 (888)
T ss_pred             CCchheeeccC
Confidence            99999999644


No 363
>KOG0201|consensus
Probab=99.61  E-value=1.9e-16  Score=109.75  Aligned_cols=101  Identities=42%  Similarity=0.776  Sum_probs=85.4

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL   86 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   86 (134)
                      +.+.++..+|+.++.+++++||..+|                          +.+..+..+|++||||.+|++.+.+.. 
T Consensus        52 ~deIediqqei~~Ls~~~~~~it~yy--------------------------gsyl~g~~LwiiMey~~gGsv~~lL~~-  104 (467)
T KOG0201|consen   52 EDEIEDIQQEISVLSQCDSPNITEYY--------------------------GSYLKGTKLWIIMEYCGGGSVLDLLKS-  104 (467)
T ss_pred             chhhHHHHHHHHHHHhcCcchHHhhh--------------------------hheeecccHHHHHHHhcCcchhhhhcc-
Confidence            44667888888888888888888854                          456667889999999999999988743 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         87 EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        87 ~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +..+.+..+..++++++.|+.|+|..+.+|||||+.|+++..+|.+|+
T Consensus       105 ~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl  152 (467)
T KOG0201|consen  105 GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKL  152 (467)
T ss_pred             CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEE
Confidence            445578888888999999999999999999999999999998888864


No 364
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.61  E-value=5.1e-15  Score=99.85  Aligned_cols=88  Identities=33%  Similarity=0.583  Sum_probs=74.3

Q ss_pred             HhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCC
Q psy15406         46 LSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE---LEKPLTEQQIRYICHYMCKALQFLHTH-RVIHRDLKA  121 (134)
Q Consensus        46 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dik~  121 (134)
                      ++..+|+|++++++.+..++..|++|||++ |++..++..   ....+++..+..++.|++.|+.|+|++ +++|+|+||
T Consensus        54 ~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp  132 (283)
T cd06617          54 MRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKP  132 (283)
T ss_pred             HHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCH
Confidence            455678888889999999999999999997 467665543   224578999999999999999999997 999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      +||+++.++.++|
T Consensus       133 ~nil~~~~~~~kl  145 (283)
T cd06617         133 SNVLINRNGQVKL  145 (283)
T ss_pred             HHEEECCCCCEEE
Confidence            9999998887764


No 365
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.60  E-value=5.1e-15  Score=102.80  Aligned_cols=103  Identities=20%  Similarity=0.453  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK   88 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~   88 (134)
                      ..+.+.+|++++++++|||++.+.+.+.....                    .......+++++++ ++++..++..  .
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--------------------~~~~~~~~lv~e~~-~~~L~~~~~~--~  113 (343)
T cd07851          57 HAKRTYRELRLLKHMDHENVIGLLDVFTPASS--------------------LEDFQDVYLVTHLM-GADLNNIVKC--Q  113 (343)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHHHHHhhcccc--------------------ccccccEEEEEecC-CCCHHHHHhc--C
Confidence            34556677777777777777776554322110                    01123488999998 5588777653  5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         89 PLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        89 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .+++..+..++.|++.++.|+|+.|++|+|++|+||+++.++.++|
T Consensus       114 ~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL  159 (343)
T cd07851         114 KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI  159 (343)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEE
Confidence            6889999999999999999999999999999999999998887764


No 366
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.60  E-value=7.3e-15  Score=102.12  Aligned_cols=91  Identities=23%  Similarity=0.522  Sum_probs=70.0

Q ss_pred             HHHHHHhhCCCCCccccceeeeeC------CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         41 LWIDILSDCKHENIVQLYEAFFTN------GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        41 ~~~~~~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      .|+.+++.++|+|++++++.+...      ...|++++++ ++++..+...  ..+++..+..++.|++.|+.|+|+.|+
T Consensus        65 ~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i  141 (345)
T cd07877          65 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADI  141 (345)
T ss_pred             HHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345555555555555576666432      3467888876 6678776543  468889999999999999999999999


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +|+|++|+||+++.++.+++
T Consensus       142 vH~dlkp~NIll~~~~~~kl  161 (345)
T cd07877         142 IHRDLKPSNLAVNEDCELKI  161 (345)
T ss_pred             eecCCChHHEEEcCCCCEEE
Confidence            99999999999999888764


No 367
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.60  E-value=6.4e-15  Score=102.05  Aligned_cols=68  Identities=25%  Similarity=0.558  Sum_probs=58.6

Q ss_pred             CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         65 GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        65 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ...|+++||+. +++...+.. ...+++.....++.|++.++.|+|+.+++|+|++|+||+++.++.++|
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL  149 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKI  149 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEE
Confidence            35899999996 567766543 467899999999999999999999999999999999999998887764


No 368
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.59  E-value=2.2e-14  Score=97.58  Aligned_cols=83  Identities=34%  Similarity=0.599  Sum_probs=69.8

Q ss_pred             CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCCeEEecC
Q psy15406         51 HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        51 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dik~~nill~~~  129 (134)
                      |+|++++++.+..+...|++||++++ ++..+.......+++.....++.+++.++.|+|+ .|++|+|++|+||+++.+
T Consensus        73 ~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~  151 (296)
T cd06618          73 CPYIVKCYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS  151 (296)
T ss_pred             CCchHhhheeeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC
Confidence            56666688888888899999999854 6666665545678888889999999999999997 599999999999999988


Q ss_pred             CeeeC
Q psy15406        130 GGVKL  134 (134)
Q Consensus       130 ~~~~i  134 (134)
                      +.++|
T Consensus       152 ~~~kL  156 (296)
T cd06618         152 GNVKL  156 (296)
T ss_pred             CCEEE
Confidence            87764


No 369
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.59  E-value=1.4e-14  Score=100.07  Aligned_cols=82  Identities=28%  Similarity=0.524  Sum_probs=64.1

Q ss_pred             CCCccccceeeee----CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEE
Q psy15406         51 HENIVQLYEAFFT----NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLL  126 (134)
Q Consensus        51 h~~i~~~~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill  126 (134)
                      |+|++++++.+..    ....+++++++. +++...+.. ...+++.....++.|++.|+.|+|+.|++|+|+||+||++
T Consensus        61 h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili  138 (332)
T cd07857          61 HKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV  138 (332)
T ss_pred             CCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE
Confidence            4444446554322    245788999886 477776643 4678899999999999999999999999999999999999


Q ss_pred             ecCCeeeC
Q psy15406        127 TMSGGVKL  134 (134)
Q Consensus       127 ~~~~~~~i  134 (134)
                      +.++.++|
T Consensus       139 ~~~~~~kl  146 (332)
T cd07857         139 NADCELKI  146 (332)
T ss_pred             cCCCCEEe
Confidence            98887764


No 370
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.59  E-value=9.4e-15  Score=99.68  Aligned_cols=104  Identities=28%  Similarity=0.479  Sum_probs=75.0

Q ss_pred             HHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCC
Q psy15406         12 DFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLT   91 (134)
Q Consensus        12 ~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~   91 (134)
                      .+.+|+++++.++||||+++++.+.....                  ........++++++|+.+ ++...+......++
T Consensus        53 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------------------~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~  113 (311)
T cd07866          53 TALREIKILKKLKHPNVVPLIDMAVERPD------------------KSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLT  113 (311)
T ss_pred             hHHHHHHHHHhcCCCCccchhhheecccc------------------cccccCceEEEEEecCCc-CHHHHHhccccCCC
Confidence            45567777777777776665443322100                  001223457999999876 45555444445789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         92 EQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        92 ~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +..+..++.|++.++.|+|+.|++|+|++|+||+++.++.+++
T Consensus       114 ~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l  156 (311)
T cd07866         114 ESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKI  156 (311)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence            9999999999999999999999999999999999998887764


No 371
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.58  E-value=3.5e-14  Score=93.11  Aligned_cols=98  Identities=41%  Similarity=0.733  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCC
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKP   89 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~   89 (134)
                      .+.+.+|++.+++++|+++++                          +.+.+......++++|+++++++..++... ..
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~--------------------------~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~-~~   83 (244)
T smart00220       31 RERILREISILKKLKHPNIVR--------------------------LYDVFEDEDKLYLVMEYCDGGDLFDLLKKR-GR   83 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHH--------------------------HHhheeeCCEEEEEEeCCCCCCHHHHHHhc-cC
Confidence            456666666666666666666                          666677778899999999999998887553 33


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         90 LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        90 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++......++.+++.++.++|..+++|+|++|+||+++.++.+++
T Consensus        84 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l  128 (244)
T smart00220       84 LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKL  128 (244)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEE
Confidence            788999999999999999999999999999999999998876653


No 372
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.57  E-value=1.8e-14  Score=92.60  Aligned_cols=90  Identities=18%  Similarity=0.242  Sum_probs=67.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFL-HTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~h~d  118 (134)
                      ..|+.++..+.++++.........  ..+++|||++++++...... ...++...+..++.|++.++.++ |+.|++|||
T Consensus        67 ~~E~~~l~~l~~~~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrD  143 (190)
T cd05147          67 EKEMRNLKRLVTAGIPCPEPILLK--SHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCRLVHAD  143 (190)
T ss_pred             HHHHHHHHHHHHCCCCCCcEEEec--CCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            457777777776666443332222  23899999998776544322 35688888999999999999999 699999999


Q ss_pred             CCCCCeEEecCCeee
Q psy15406        119 LKAGNVLLTMSGGVK  133 (134)
Q Consensus       119 ik~~nill~~~~~~~  133 (134)
                      +||+||+++. +.++
T Consensus       144 lkP~NIli~~-~~v~  157 (190)
T cd05147         144 LSEYNLLYHD-GKLY  157 (190)
T ss_pred             CCHHHEEEEC-CcEE
Confidence            9999999984 5554


No 373
>PTZ00284 protein kinase; Provisional
Probab=99.56  E-value=3.1e-14  Score=102.62  Aligned_cols=79  Identities=20%  Similarity=0.413  Sum_probs=64.5

Q ss_pred             CCCCccccceeeeeC-CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCCeEEe
Q psy15406         50 KHENIVQLYEAFFTN-GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHRDLKAGNVLLT  127 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dik~~nill~  127 (134)
                      +|.+++.+.+++..+ +..|++|+++ ++++..++.. ...+++..+..++.|++.|+.|+|. .|++||||||+||+++
T Consensus       189 ~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~  266 (467)
T PTZ00284        189 DRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILME  266 (467)
T ss_pred             cCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEe
Confidence            355677788887754 5789999988 5567666654 3578899999999999999999998 5999999999999998


Q ss_pred             cCC
Q psy15406        128 MSG  130 (134)
Q Consensus       128 ~~~  130 (134)
                      .++
T Consensus       267 ~~~  269 (467)
T PTZ00284        267 TSD  269 (467)
T ss_pred             cCC
Confidence            654


No 374
>KOG0664|consensus
Probab=99.56  E-value=1.3e-15  Score=101.06  Aligned_cols=102  Identities=25%  Similarity=0.496  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCC
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKP   89 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~   89 (134)
                      .+++.+|++++..++|.||....+.              ++.||+--+       ...|+++|++.. +|+.++.+ ...
T Consensus        96 ~krvFre~kmLcfFkHdNVLSaLDI--------------LQPph~dfF-------qEiYV~TELmQS-DLHKIIVS-PQ~  152 (449)
T KOG0664|consen   96 CKRVFREIKMLSSFRHDNVLSLLDI--------------LQPANPSFF-------QELYVLTELMQS-DLHKIIVS-PQA  152 (449)
T ss_pred             HHHHHHHHHHHHhhccccHHHHHHh--------------cCCCCchHH-------HHHHHHHHHHHh-hhhheecc-CCC
Confidence            3566777777777777777653221              122222111       125678888755 66666543 567


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         90 LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        90 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ++...+..+++||+.|++|+|+.+|.||||||+|++++++..+||
T Consensus       153 Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKI  197 (449)
T KOG0664|consen  153 LTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKI  197 (449)
T ss_pred             CCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEe
Confidence            888999999999999999999999999999999999999988775


No 375
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.56  E-value=4.4e-14  Score=95.33  Aligned_cols=85  Identities=31%  Similarity=0.535  Sum_probs=71.9

Q ss_pred             CCCCCccccceeeeeCCE-----EEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q psy15406         49 CKHENIVQLYEAFFTNGK-----LWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAG  122 (134)
Q Consensus        49 ~~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~  122 (134)
                      ++|+|++++.+.+.....     .+++||++.+ ++.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|++|+
T Consensus        58 ~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~  136 (287)
T cd07838          58 FEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQ  136 (287)
T ss_pred             cCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChh
Confidence            357888889999887766     8999999975 6777665432 35789999999999999999999999999999999


Q ss_pred             CeEEecCCeeeC
Q psy15406        123 NVLLTMSGGVKL  134 (134)
Q Consensus       123 nill~~~~~~~i  134 (134)
                      |++++.++.+++
T Consensus       137 nili~~~~~~~l  148 (287)
T cd07838         137 NILVTSDGQVKI  148 (287)
T ss_pred             hEEEccCCCEEE
Confidence            999999887764


No 376
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.55  E-value=5.2e-14  Score=95.26  Aligned_cols=94  Identities=31%  Similarity=0.553  Sum_probs=73.6

Q ss_pred             HHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHHHC-C
Q psy15406         40 KLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIML----ELEKPLTEQQIRYICHYMCKALQFLHTH-R  113 (134)
Q Consensus        40 ~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~  113 (134)
                      ..|+.++.++. |+|++++++.+..+...+++||++.. ++.++..    .....+++.....++.+++.++.|+|+. +
T Consensus        50 ~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~  128 (288)
T cd06616          50 LMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK  128 (288)
T ss_pred             HHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence            34555566664 77777799988888889999999875 4443321    1235688999999999999999999975 9


Q ss_pred             CccCCCCCCCeEEecCCeeeC
Q psy15406        114 VIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       114 i~h~dik~~nill~~~~~~~i  134 (134)
                      ++|+|+||+||+++.++.+++
T Consensus       129 i~H~dlkp~Nil~~~~~~~kl  149 (288)
T cd06616         129 IIHRDVKPSNILLDRNGNIKL  149 (288)
T ss_pred             eeccCCCHHHEEEccCCcEEE
Confidence            999999999999998887654


No 377
>KOG0587|consensus
Probab=99.55  E-value=4.9e-14  Score=104.80  Aligned_cols=93  Identities=38%  Similarity=0.713  Sum_probs=77.2

Q ss_pred             HHHHHhhC-CCCCccccceeeee-----CCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         42 WIDILSDC-KHENIVQLYEAFFT-----NGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        42 ~~~~~~~~-~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      |+.+++.. +|||++.+++.|..     ++.+|+|||||.+|+.-+++.+. +..+.+..+..+.+.++.|+.++|.+.+
T Consensus        65 eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkv  144 (953)
T KOG0587|consen   65 EYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKV  144 (953)
T ss_pred             HHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcce
Confidence            34444444 36666668777763     57799999999999999988653 4567899999999999999999999999


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +|||+|-.||++..+|.+|+
T Consensus       145 iHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen  145 IHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             eeecccCceEEEeccCcEEE
Confidence            99999999999999999874


No 378
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.55  E-value=8.7e-14  Score=100.78  Aligned_cols=115  Identities=20%  Similarity=0.339  Sum_probs=82.4

Q ss_pred             hHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCC-----ccccceeee--------eCCEEEEEEecc
Q psy15406          8 EELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHEN-----IVQLYEAFF--------TNGKLWMLIEYC   74 (134)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~-----i~~~~~~~~--------~~~~~~lv~e~~   74 (134)
                      ...++|.+|..+.+...|++++..+            .+..++|.+     ++.+.++|.        .++..|+|+||+
T Consensus       200 ~~~~~fl~e~~~~~~~~e~~~vE~~------------~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~  267 (507)
T PLN03224        200 GVRQDFLKTGTLAKGSAETGMVEAY------------MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFE  267 (507)
T ss_pred             hhHHHHHhhhhhhhcccchhHHHHH------------HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcC
Confidence            3445677777777777777766533            333344333     344555443        245689999999


Q ss_pred             CCCCHHHHHHHhCC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCe
Q psy15406         75 DGGAVDSIMLELEK-----------------------PLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGG  131 (134)
Q Consensus        75 ~~~~l~~~~~~~~~-----------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~  131 (134)
                      ++++|.+++.....                       ..++..+..++.|++.++.|+|..+++|||+||+||+++.++.
T Consensus       268 ~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~  347 (507)
T PLN03224        268 SDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQ  347 (507)
T ss_pred             CCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCc
Confidence            99999887753211                       1245567788999999999999999999999999999998887


Q ss_pred             eeC
Q psy15406        132 VKL  134 (134)
Q Consensus       132 ~~i  134 (134)
                      ++|
T Consensus       348 ~kL  350 (507)
T PLN03224        348 VKI  350 (507)
T ss_pred             EEE
Confidence            764


No 379
>KOG0665|consensus
Probab=99.55  E-value=4.3e-15  Score=99.83  Aligned_cols=95  Identities=24%  Similarity=0.452  Sum_probs=75.1

Q ss_pred             HhchHHHHHHHhhCCCCCccccceeeeeCC------EEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH
Q psy15406         36 FTNGKLWIDILSDCKHENIVQLYEAFFTNG------KLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        36 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      .+++.+|..++..++|+|+++++..|.-..      .+|++||++.. ++.....   ..+.......++.|.+.|++|+
T Consensus        59 akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~l  134 (369)
T KOG0665|consen   59 AKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHL  134 (369)
T ss_pred             chhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHH
Confidence            345566777777777777777777776332      37999999966 5554443   3467788999999999999999


Q ss_pred             HHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        110 HTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       110 h~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |+.||+|||+||+||++..++..||
T Consensus       135 hs~~IihRdLkPsnivv~~~~~lKi  159 (369)
T KOG0665|consen  135 HSAGIIHRDLKPSNIVVNSDCTLKI  159 (369)
T ss_pred             HhcceeecccCcccceecchhheee
Confidence            9999999999999999999988875


No 380
>KOG0984|consensus
Probab=99.54  E-value=1.6e-14  Score=92.40  Aligned_cols=94  Identities=31%  Similarity=0.563  Sum_probs=78.5

Q ss_pred             HHHHHHHhh-CCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHH---HhCCCCCHHHHHHHHHHHHHHHHHHHHC-CC
Q psy15406         40 KLWIDILSD-CKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIML---ELEKPLTEQQIRYICHYMCKALQFLHTH-RV  114 (134)
Q Consensus        40 ~~~~~~~~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i  114 (134)
                      -.++++..+ ...|+.+.+|+.+...+.+|+.||.+.. +++.+..   +.+...++..+-.++-.++.|+.|+|++ .+
T Consensus        92 L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~v  170 (282)
T KOG0984|consen   92 LMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSV  170 (282)
T ss_pred             HHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhh
Confidence            344555443 4689999999999999999999999865 6665543   3456789999999999999999999976 79


Q ss_pred             ccCCCCCCCeEEecCCeeeC
Q psy15406        115 IHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~i  134 (134)
                      +|||+||+||+++.+|++|+
T Consensus       171 IHRDvKPsNiLIn~~GqVKi  190 (282)
T KOG0984|consen  171 IHRDVKPSNILINYDGQVKI  190 (282)
T ss_pred             hhccCCcceEEEccCCcEEE
Confidence            99999999999999999985


No 381
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.54  E-value=6.1e-14  Score=90.14  Aligned_cols=90  Identities=14%  Similarity=0.190  Sum_probs=67.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~d  118 (134)
                      ..|...+..+.++++..........  .+++|||++++++...... ...++......++.+++.++.++|. .|++|+|
T Consensus        67 ~~E~~~l~~l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrD  143 (190)
T cd05145          67 EKEFRNLKRLYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGD  143 (190)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            4677777778777765444433332  4899999998754333222 2456778888999999999999999 9999999


Q ss_pred             CCCCCeEEecCCeee
Q psy15406        119 LKAGNVLLTMSGGVK  133 (134)
Q Consensus       119 ik~~nill~~~~~~~  133 (134)
                      +||+||+++ ++.++
T Consensus       144 lkP~NIll~-~~~~~  157 (190)
T cd05145         144 LSEYNILYH-DGKPY  157 (190)
T ss_pred             CChhhEEEE-CCCEE
Confidence            999999998 66665


No 382
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.54  E-value=1.9e-13  Score=87.56  Aligned_cols=95  Identities=39%  Similarity=0.671  Sum_probs=79.3

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+..++.++|++++++++.+......++++|+++++++..++......++......++.+++.++.++|..|++|+|
T Consensus        38 ~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~d  117 (215)
T cd00180          38 LLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD  117 (215)
T ss_pred             HHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            44555666666666677788888888899999999998999988765334678899999999999999999999999999


Q ss_pred             CCCCCeEEec-CCeee
Q psy15406        119 LKAGNVLLTM-SGGVK  133 (134)
Q Consensus       119 ik~~nill~~-~~~~~  133 (134)
                      ++|+||+++. ++.++
T Consensus       118 l~~~ni~~~~~~~~~~  133 (215)
T cd00180         118 LKPENILLDSDNGKVK  133 (215)
T ss_pred             CCHhhEEEeCCCCcEE
Confidence            9999999988 66654


No 383
>KOG1027|consensus
Probab=99.53  E-value=5.6e-14  Score=104.03  Aligned_cols=98  Identities=22%  Similarity=0.437  Sum_probs=79.6

Q ss_pred             HHHHHHHhchHHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCC---CCHHHHHHHHHHHHHH
Q psy15406         30 QLYEAFFTNGKLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKP---LTEQQIRYICHYMCKA  105 (134)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~i~~~  105 (134)
                      ++...+.+-+.+|+.+++.-+ ||||+.+++.=.++.+.|+..|.|.. +|.+++......   .........+.|++.|
T Consensus       540 rll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~G  618 (903)
T KOG1027|consen  540 RLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASG  618 (903)
T ss_pred             HHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHH
Confidence            444555666778999999886 99999999998899999999999976 788877552111   1124456778999999


Q ss_pred             HHHHHHCCCccCCCCCCCeEEec
Q psy15406        106 LQFLHTHRVIHRDLKAGNVLLTM  128 (134)
Q Consensus       106 l~~lh~~~i~h~dik~~nill~~  128 (134)
                      ++++|+.+|+|||+||+||++..
T Consensus       619 laHLHsl~iVHRDLkPQNILI~~  641 (903)
T KOG1027|consen  619 LAHLHSLKIVHRDLKPQNILISV  641 (903)
T ss_pred             HHHHHhcccccccCCCceEEEEc
Confidence            99999999999999999999976


No 384
>KOG0668|consensus
Probab=99.53  E-value=7.7e-15  Score=95.21  Aligned_cols=87  Identities=28%  Similarity=0.428  Sum_probs=68.4

Q ss_pred             hHHHHHHHhhCC-CCCccccceeeeeC--CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         39 GKLWIDILSDCK-HENIVQLYEAFFTN--GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        39 ~~~~~~~~~~~~-h~~i~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      -++|+.|+..+. +|||+++++...+.  ...-+++|+..+.+...+.    ..++-..+..++.+++.|+.|+|+.||.
T Consensus        79 IkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GIm  154 (338)
T KOG0668|consen   79 IKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIM  154 (338)
T ss_pred             HHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcc
Confidence            345666666654 66666677777654  3466999999887666554    4577788999999999999999999999


Q ss_pred             cCCCCCCCeEEecC
Q psy15406        116 HRDLKAGNVLLTMS  129 (134)
Q Consensus       116 h~dik~~nill~~~  129 (134)
                      |||+||.|++++..
T Consensus       155 HRDVKPhNvmIdh~  168 (338)
T KOG0668|consen  155 HRDVKPHNVMIDHE  168 (338)
T ss_pred             cccCCcceeeechh
Confidence            99999999999865


No 385
>KOG0199|consensus
Probab=99.52  E-value=8.2e-15  Score=107.26  Aligned_cols=99  Identities=25%  Similarity=0.403  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH-hC
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE-LE   87 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~   87 (134)
                      ...+|++|+.+|-+|+|||+++                          +|+...+ ....+|||+++.|+|.+.+.+ ..
T Consensus       154 ~mddflrEas~M~~L~H~hliR--------------------------LyGvVl~-qp~mMV~ELaplGSLldrLrka~~  206 (1039)
T KOG0199|consen  154 IMDDFLREASHMLKLQHPHLIR--------------------------LYGVVLD-QPAMMVFELAPLGSLLDRLRKAKK  206 (1039)
T ss_pred             hHHHHHHHHHHHHhccCcceeE--------------------------Eeeeecc-chhhHHhhhcccchHHHHHhhccc
Confidence            6678999999999888888888                          5666655 567899999999999988876 34


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         88 KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        88 ~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ..+.......|+.||+.|+.||-.++++|||+...|+++...-.+||
T Consensus       207 ~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI  253 (1039)
T KOG0199|consen  207 AILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKI  253 (1039)
T ss_pred             cceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeee
Confidence            56788889999999999999999999999999999999987777665


No 386
>KOG1025|consensus
Probab=99.52  E-value=1.2e-14  Score=107.82  Aligned_cols=102  Identities=22%  Similarity=0.358  Sum_probs=88.3

Q ss_pred             chhHHHHHHHHHHHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH
Q psy15406          6 GEEELSDFMIEIDILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE   85 (134)
Q Consensus         6 ~~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   85 (134)
                      +++...++++|+-+|.+++|||++++.+..                          ..+ .+.|+++|++.|.|.+++..
T Consensus       738 ~~~~s~e~LdeAl~masldHpnl~RLLgvc--------------------------~~s-~~qlvtq~mP~G~LlDyvr~  790 (1177)
T KOG1025|consen  738 SPKASIELLDEALRMASLDHPNLLRLLGVC--------------------------MLS-TLQLVTQLMPLGCLLDYVRE  790 (1177)
T ss_pred             CchhhHHHHHHHHHHhcCCCchHHHHhhhc--------------------------ccc-hHHHHHHhcccchHHHHHHH
Confidence            355678899999999999999999965543                          332 37799999999999999988


Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         86 LEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        86 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ....+..+..+.|..||+.|+.|+|.++++||||.++|+|+..-..+||
T Consensus       791 hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvki  839 (1177)
T KOG1025|consen  791 HRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKI  839 (1177)
T ss_pred             hhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEE
Confidence            7778889999999999999999999999999999999999988777664


No 387
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.52  E-value=5.2e-14  Score=97.73  Aligned_cols=89  Identities=28%  Similarity=0.615  Sum_probs=66.5

Q ss_pred             HHHHHhhCCCCCccccceeeeeC------CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTN------GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      |+.+++.++|+|++++++++...      ...+++++++.. ++....   ...++...+..++.|++.|+.|+|+.|++
T Consensus        64 e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~  139 (342)
T cd07879          64 ELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGII  139 (342)
T ss_pred             HHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-CHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            44444444455555565555432      346899999864 555432   24678889999999999999999999999


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      |+|++|+||+++.++.+++
T Consensus       140 H~dlkp~NIll~~~~~~kL  158 (342)
T cd07879         140 HRDLKPGNLAVNEDCELKI  158 (342)
T ss_pred             cCCCCHHHEEECCCCCEEE
Confidence            9999999999999887764


No 388
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.52  E-value=2.7e-13  Score=88.24  Aligned_cols=93  Identities=40%  Similarity=0.680  Sum_probs=74.3

Q ss_pred             HHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKA  121 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~  121 (134)
                      |++.++.++|+|++.+++.+......++++|+++++++..++......++......++.+++.++.++|..+++|+|++|
T Consensus        47 e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~  126 (225)
T smart00221       47 EIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKP  126 (225)
T ss_pred             HHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            34444444455555577788877889999999999999888765322278888999999999999999999999999999


Q ss_pred             CCeEEecCCeeeC
Q psy15406        122 GNVLLTMSGGVKL  134 (134)
Q Consensus       122 ~nill~~~~~~~i  134 (134)
                      .|++++.++.+++
T Consensus       127 ~ni~v~~~~~~~l  139 (225)
T smart00221      127 ENILLGMDGLVKL  139 (225)
T ss_pred             HHEEEcCCCCEEE
Confidence            9999998776653


No 389
>KOG0603|consensus
Probab=99.51  E-value=4.5e-14  Score=101.85  Aligned_cols=93  Identities=27%  Similarity=0.431  Sum_probs=75.4

Q ss_pred             HHHHHHHhhC-CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         40 KLWIDILSDC-KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ..|+.++... +|+|++++++.+.++...|+|||.+.++.+...+... +.+. ..+..|+.+++.++.|+|.+|++|||
T Consensus       363 ~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~-~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRD  440 (612)
T KOG0603|consen  363 QDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSK-PEFC-SEASQWAAELVSAVDYLHEQGVVHRD  440 (612)
T ss_pred             ccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhc-chhH-HHHHHHHHHHHHHHHHHHhcCeeecC
Confidence            3445455444 6999999999999999999999999998887666542 2233 56667999999999999999999999


Q ss_pred             CCCCCeEE-ecCCeeeC
Q psy15406        119 LKAGNVLL-TMSGGVKL  134 (134)
Q Consensus       119 ik~~nill-~~~~~~~i  134 (134)
                      +||+||++ +..|.+++
T Consensus       441 Lkp~NIL~~~~~g~lrl  457 (612)
T KOG0603|consen  441 LKPGNILLDGSAGHLRL  457 (612)
T ss_pred             CChhheeecCCCCcEEE
Confidence            99999999 57777653


No 390
>KOG0696|consensus
Probab=99.51  E-value=1.3e-14  Score=101.10  Aligned_cols=84  Identities=31%  Similarity=0.487  Sum_probs=76.7

Q ss_pred             CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         50 KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      +.|++++++.+|++-+.+|+||||+.||.|.-.+.+ -+.+.+..+..++..++.|+.|+|+.||+.||+|.+|++++.+
T Consensus       408 kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ-~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~e  486 (683)
T KOG0696|consen  408 KPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE  486 (683)
T ss_pred             CCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHH-hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccC
Confidence            478999999999999999999999999998765544 3678889999999999999999999999999999999999999


Q ss_pred             CeeeC
Q psy15406        130 GGVKL  134 (134)
Q Consensus       130 ~~~~i  134 (134)
                      |.+||
T Consensus       487 GHiKi  491 (683)
T KOG0696|consen  487 GHIKI  491 (683)
T ss_pred             CceEe
Confidence            99986


No 391
>KOG0695|consensus
Probab=99.50  E-value=3.1e-14  Score=97.03  Aligned_cols=85  Identities=38%  Similarity=0.621  Sum_probs=78.3

Q ss_pred             CCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEec
Q psy15406         49 CKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTM  128 (134)
Q Consensus        49 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~  128 (134)
                      -+||+++.++.+|++++.+++|.||.++|.|...+. ..+.++++.++.+...+..++.|+|+.||+.||+|.+|++++.
T Consensus       308 sn~pflvglhscfqtesrlffvieyv~ggdlmfhmq-rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda  386 (593)
T KOG0695|consen  308 SNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA  386 (593)
T ss_pred             cCCCeEEehhhhhcccceEEEEEEEecCcceeeehh-hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc
Confidence            369999999999999999999999999999876553 3578999999999999999999999999999999999999999


Q ss_pred             CCeeeC
Q psy15406        129 SGGVKL  134 (134)
Q Consensus       129 ~~~~~i  134 (134)
                      .|.+|+
T Consensus       387 eghikl  392 (593)
T KOG0695|consen  387 EGHIKL  392 (593)
T ss_pred             CCceee
Confidence            999875


No 392
>KOG1151|consensus
Probab=99.50  E-value=1.8e-13  Score=96.31  Aligned_cols=91  Identities=31%  Similarity=0.530  Sum_probs=79.6

Q ss_pred             chHHHHHHHhhCCCCCccccceeeee-CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC--CC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFT-NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTH--RV  114 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--~i  114 (134)
                      .+-+|.+|.+.++||.|+++|++|.- .+.+|-|+|||+|.+|+.++.. +...++..++.++-|++.++.|+...  .|
T Consensus       513 HAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQ-hklmSEKEARSIiMQiVnAL~YLNEikpPI  591 (775)
T KOG1151|consen  513 HACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQ-HKLMSEKEARSIIMQIVNALKYLNEIKPPI  591 (775)
T ss_pred             HHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHh-hhhhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence            35567999999999999999999984 4678999999999999887755 56789999999999999999999976  49


Q ss_pred             ccCCCCCCCeEEecC
Q psy15406        115 IHRDLKAGNVLLTMS  129 (134)
Q Consensus       115 ~h~dik~~nill~~~  129 (134)
                      +|-|+||.||++-..
T Consensus       592 IHYDLKPgNILLv~G  606 (775)
T KOG1151|consen  592 IHYDLKPGNILLVNG  606 (775)
T ss_pred             eeeccCCccEEEecC
Confidence            999999999998543


No 393
>KOG2052|consensus
Probab=99.50  E-value=9.9e-14  Score=96.85  Aligned_cols=105  Identities=22%  Similarity=0.405  Sum_probs=84.0

Q ss_pred             chhHHHHHHHHHHHHhh--cCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHH
Q psy15406          6 GEEELSDFMIEIDILSD--CKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIM   83 (134)
Q Consensus         6 ~~~~~~~~~~E~~~~~~--l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~   83 (134)
                      ...+...|.||.++.+.  |+|+||..+.++=.+..                      ..-..+|++++|.+.|+|++++
T Consensus       243 ~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~----------------------gs~TQLwLvTdYHe~GSL~DyL  300 (513)
T KOG2052|consen  243 SSRDERSWFRETEIYQTVMLRHENILGFIAADNKDN----------------------GSWTQLWLVTDYHEHGSLYDYL  300 (513)
T ss_pred             cccchhhhhhHHHHHHHHHhccchhhhhhhccccCC----------------------CceEEEEEeeecccCCcHHHHH
Confidence            45677789999998886  58999988654321110                      0113589999999999999998


Q ss_pred             HHhCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCCCCCeEEecCCeeeC
Q psy15406         84 LELEKPLTEQQIRYICHYMCKALQFLHTH--------RVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~i~h~dik~~nill~~~~~~~i  134 (134)
                      ..  ..+.......++..++.|+.+||..        .|.|||||..||++..+|.+.|
T Consensus       301 ~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I  357 (513)
T KOG2052|consen  301 NR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  357 (513)
T ss_pred             hh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence            64  6788999999999999999999965        3899999999999999988754


No 394
>KOG0200|consensus
Probab=99.49  E-value=3.1e-13  Score=100.19  Aligned_cols=101  Identities=29%  Similarity=0.513  Sum_probs=87.8

Q ss_pred             hHHHHHHHHHHHHhhcC-chhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHh
Q psy15406          8 EELSDFMIEIDILSDCK-HENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL   86 (134)
Q Consensus         8 ~~~~~~~~E~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   86 (134)
                      .+.+.+.+|+++|+.+. ||||+.                          +.+.+..++.+++++||+..|+|..++...
T Consensus       343 ~~~~~~~~El~~m~~~g~H~niv~--------------------------llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~  396 (609)
T KOG0200|consen  343 SEKKDLMSELNVLKELGKHPNIVN--------------------------LLGACTQDGPLYVIVEYAEHGDLLEFLRKK  396 (609)
T ss_pred             HHHHHHHHHHHHHHHhcCCcchhh--------------------------heeeeccCCceEEEEEeccCCcHHHHHHhc
Confidence            56678888888888875 777777                          777788889999999999999999988765


Q ss_pred             C---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         87 E---------------KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        87 ~---------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .               ..++......+..|++.|+.|+.+..++|||+.++||++..+..+||
T Consensus       397 r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kI  459 (609)
T KOG0200|consen  397 RVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKI  459 (609)
T ss_pred             cccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEE
Confidence            4               23788899999999999999999999999999999999998877765


No 395
>KOG0596|consensus
Probab=99.48  E-value=4.8e-13  Score=95.72  Aligned_cols=94  Identities=29%  Similarity=0.452  Sum_probs=79.1

Q ss_pred             chHHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         38 NGKLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        38 ~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      .-..||.+|..++ |.+|++++++=.+++++|+|||+- .-+|..++.+.....+-...+.+..|++.++.++|+.||+|
T Consensus       405 gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVH  483 (677)
T KOG0596|consen  405 GYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVH  483 (677)
T ss_pred             HHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceee
Confidence            3466899999986 899999999999999999999964 55788888775555555688999999999999999999999


Q ss_pred             CCCCCCCeEEecCCeee
Q psy15406        117 RDLKAGNVLLTMSGGVK  133 (134)
Q Consensus       117 ~dik~~nill~~~~~~~  133 (134)
                      .|+||.|+++-. |.+|
T Consensus       484 SDLKPANFLlVk-G~LK  499 (677)
T KOG0596|consen  484 SDLKPANFLLVK-GRLK  499 (677)
T ss_pred             cCCCcccEEEEe-eeEE
Confidence            999999998643 3443


No 396
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.48  E-value=9.1e-13  Score=89.75  Aligned_cols=90  Identities=19%  Similarity=0.250  Sum_probs=69.2

Q ss_pred             HHHHhhCCCCCccccceeeeeCC----EEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         43 IDILSDCKHENIVQLYEAFFTNG----KLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      +..+..++|++++.+++++....    ..+++++++.. ++...+.. ....++..+..++.|++.|+.|+|+.+++|||
T Consensus        74 ~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrD  151 (294)
T PHA02882         74 WKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGD  151 (294)
T ss_pred             HHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            34456678999999998766543    35678887654 44444432 23467788889999999999999999999999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      |||+||+++.++.++|
T Consensus       152 iKp~Nill~~~~~~~l  167 (294)
T PHA02882        152 IKPENIMVDGNNRGYI  167 (294)
T ss_pred             CCHHHEEEcCCCcEEE
Confidence            9999999988877653


No 397
>KOG0576|consensus
Probab=99.48  E-value=8.8e-15  Score=106.30  Aligned_cols=94  Identities=43%  Similarity=0.846  Sum_probs=78.3

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .+||-+++.++|+||+.+++.+.....+|+.||||.+|++.+...- .+++++.++....+..+.++.|+|+.|=+||||
T Consensus        60 qqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~-TgplselqiayvcRetl~gl~ylhs~gk~hRdi  138 (829)
T KOG0576|consen   60 QQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDI  138 (829)
T ss_pred             ccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeee-cccchhHHHHHHHhhhhccchhhhcCCcccccc
Confidence            3455555666666666677777777889999999999999887643 467889999999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      |-.||++.+.|.+|+
T Consensus       139 KGanilltd~gDvkl  153 (829)
T KOG0576|consen  139 KGANILLTDEGDVKL  153 (829)
T ss_pred             cccceeecccCceee
Confidence            999999999988764


No 398
>KOG1345|consensus
Probab=99.48  E-value=1.5e-13  Score=91.16  Aligned_cols=91  Identities=27%  Similarity=0.455  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHhhcC-chhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC
Q psy15406         10 LSDFMIEIDILSDCK-HENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK   88 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~   88 (134)
                      .++|.||...-=.|+ |.||+..|+.                         .|++.+...+++|+++.|+|.+-+..  .
T Consensus        64 ~~dF~rEfhY~~~Ls~H~hIi~tY~v-------------------------aFqt~d~YvF~qE~aP~gdL~snv~~--~  116 (378)
T KOG1345|consen   64 QADFVREFHYSFFLSPHQHIIDTYEV-------------------------AFQTSDAYVFVQEFAPRGDLRSNVEA--A  116 (378)
T ss_pred             HHHHHHHhccceeeccchhhhHHHHH-------------------------HhhcCceEEEeeccCccchhhhhcCc--c
Confidence            467778877666664 7888877665                         34566778899999999988765432  4


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEe
Q psy15406         89 PLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLT  127 (134)
Q Consensus        89 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~  127 (134)
                      .+.+.....++.|+++++.|+|+..++|||||.+||++.
T Consensus       117 GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif  155 (378)
T KOG1345|consen  117 GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIF  155 (378)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEe
Confidence            678899999999999999999999999999999999995


No 399
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.46  E-value=3.3e-13  Score=98.86  Aligned_cols=86  Identities=13%  Similarity=0.194  Sum_probs=67.8

Q ss_pred             chHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         38 NGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ...+|+.+++.++|++++............+++|||++++++...+.         ....++.+++.++.++|+.|++||
T Consensus       382 ~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHr  452 (535)
T PRK09605        382 RTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHG  452 (535)
T ss_pred             HHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccC
Confidence            34566777777777777666666666667889999999999987764         235678899999999999999999


Q ss_pred             CCCCCCeEEecCCeee
Q psy15406        118 DLKAGNVLLTMSGGVK  133 (134)
Q Consensus       118 dik~~nill~~~~~~~  133 (134)
                      |+||+||++ .++.++
T Consensus       453 Dlkp~NILl-~~~~~~  467 (535)
T PRK09605        453 DLTTSNFIV-RDDRLY  467 (535)
T ss_pred             CCChHHEEE-ECCcEE
Confidence            999999999 445544


No 400
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.45  E-value=7.3e-13  Score=85.75  Aligned_cols=84  Identities=20%  Similarity=0.099  Sum_probs=61.9

Q ss_pred             hHHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy15406         39 GKLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHR  117 (134)
Q Consensus        39 ~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  117 (134)
                      ..+|++++++++ +++++.+++.    ...+++|+|+.|.+|......        ....++.++..++.++|..|++||
T Consensus        48 ~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~GIvHr  115 (218)
T PRK12274         48 ARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCGVAHN  115 (218)
T ss_pred             HHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCcCccC
Confidence            455666666664 3566667664    336899999999888643211        113467788999999999999999


Q ss_pred             CC-CCCCeEEecCCeeeC
Q psy15406        118 DL-KAGNVLLTMSGGVKL  134 (134)
Q Consensus       118 di-k~~nill~~~~~~~i  134 (134)
                      |+ ||+||+++.+|.++|
T Consensus       116 DL~kp~NILv~~~g~i~L  133 (218)
T PRK12274        116 DLAKEANWLVQEDGSPAV  133 (218)
T ss_pred             CCCCcceEEEcCCCCEEE
Confidence            99 799999998887653


No 401
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.44  E-value=2.4e-13  Score=89.30  Aligned_cols=84  Identities=20%  Similarity=0.383  Sum_probs=61.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeee--------CCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFT--------NGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHT  111 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~  111 (134)
                      .+|+..+.++.|+++..+.+.+..        .+..+++|||++|.++.+..     ..++    ....++..++..+|.
T Consensus        83 e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~-----~~~~----~~~~~i~~~l~~lH~  153 (232)
T PRK10359         83 ENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP-----EISE----DVKAKIKASIESLHQ  153 (232)
T ss_pred             HHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh-----hccH----HHHHHHHHHHHHHHH
Confidence            344555555566666666665442        24588999999998887652     1222    235588889999999


Q ss_pred             CCCccCCCCCCCeEEecCCeee
Q psy15406        112 HRVIHRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~~~~  133 (134)
                      .|++|+|++|+|++++.+| ++
T Consensus       154 ~gi~H~Dikp~Nili~~~g-i~  174 (232)
T PRK10359        154 HGMVSGDPHKGNFIVSKNG-LR  174 (232)
T ss_pred             cCCccCCCChHHEEEeCCC-EE
Confidence            9999999999999998877 43


No 402
>KOG0983|consensus
Probab=99.43  E-value=9.6e-14  Score=92.18  Aligned_cols=83  Identities=30%  Similarity=0.530  Sum_probs=69.7

Q ss_pred             CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCCeEEecC
Q psy15406         51 HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTH-RVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        51 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dik~~nill~~~  129 (134)
                      .|+|++-+++|..+..+++.||.+.. .++.++....+++++..+..+...++.|+.|+..+ |++|||+||+||++++.
T Consensus       150 cpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~  228 (391)
T KOG0983|consen  150 CPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER  228 (391)
T ss_pred             CCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccC
Confidence            46666688999999999999998754 45555555567889999988999999999999965 79999999999999999


Q ss_pred             CeeeC
Q psy15406        130 GGVKL  134 (134)
Q Consensus       130 ~~~~i  134 (134)
                      |++|+
T Consensus       229 GniKl  233 (391)
T KOG0983|consen  229 GNIKL  233 (391)
T ss_pred             CCEEe
Confidence            99885


No 403
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.43  E-value=1.7e-12  Score=84.44  Aligned_cols=88  Identities=17%  Similarity=0.297  Sum_probs=68.9

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.++..+.++++......+......+++|||++++++...+...    .. ....++.++..++.++|+.|++|+|
T Consensus        46 ~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~----~~-~~~~i~~~i~~~l~~lH~~~i~H~D  120 (211)
T PRK14879         46 TRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSN----GM-EELELSREIGRLVGKLHSAGIIHGD  120 (211)
T ss_pred             HHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhc----cH-HHHHHHHHHHHHHHHHHhCCcccCC
Confidence            445666666666666666666666677789999999999998876432    11 6667888999999999999999999


Q ss_pred             CCCCCeEEecCCee
Q psy15406        119 LKAGNVLLTMSGGV  132 (134)
Q Consensus       119 ik~~nill~~~~~~  132 (134)
                      ++|+||+++ ++.+
T Consensus       121 l~p~Nil~~-~~~~  133 (211)
T PRK14879        121 LTTSNMILS-GGKI  133 (211)
T ss_pred             CCcccEEEE-CCCE
Confidence            999999998 4444


No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.41  E-value=1.8e-13  Score=104.27  Aligned_cols=67  Identities=4%  Similarity=0.109  Sum_probs=55.9

Q ss_pred             CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCee
Q psy15406         65 GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGV  132 (134)
Q Consensus        65 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~  132 (134)
                      ..++.++|++ +++|..++......++...+..++.|++.|+.|+|++||+||||||+||+++..|.+
T Consensus        53 ~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~  119 (793)
T PLN00181         53 DSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHV  119 (793)
T ss_pred             chhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcE
Confidence            3466778876 558988886545568999999999999999999999999999999999999654443


No 405
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.39  E-value=3e-12  Score=82.61  Aligned_cols=86  Identities=14%  Similarity=0.224  Sum_probs=63.0

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      ...|+.++..+.++++......+......+++||+++++++...+... .    .   .++.+++.++.++|+.|++|+|
T Consensus        44 ~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~-~----~---~~~~~i~~~l~~lH~~gi~H~D  115 (199)
T TIGR03724        44 TRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEG-N----D---ELLREIGRLVGKLHKAGIVHGD  115 (199)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhc-H----H---HHHHHHHHHHHHHHHCCeecCC
Confidence            344555555555555444444455566678999999999998765431 1    1   6788899999999999999999


Q ss_pred             CCCCCeEEecCCeee
Q psy15406        119 LKAGNVLLTMSGGVK  133 (134)
Q Consensus       119 ik~~nill~~~~~~~  133 (134)
                      ++|+|++++ ++.++
T Consensus       116 l~~~Nil~~-~~~~~  129 (199)
T TIGR03724       116 LTTSNIIVR-DDKLY  129 (199)
T ss_pred             CCcceEEEE-CCcEE
Confidence            999999998 55543


No 406
>KOG3653|consensus
Probab=99.38  E-value=6.5e-12  Score=88.46  Aligned_cols=104  Identities=28%  Similarity=0.374  Sum_probs=78.6

Q ss_pred             hhHHHHHHHHHHHHhh--cCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHH
Q psy15406          7 EEELSDFMIEIDILSD--CKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIML   84 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~--l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~   84 (134)
                      .++...|..|-++.+-  +.|+||+.++++--.                      .-......|+|++|.+.|+|.+++.
T Consensus       243 ~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr----------------------~t~~~~eywLVt~fh~kGsL~dyL~  300 (534)
T KOG3653|consen  243 EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKR----------------------GTADRMEYWLVTEFHPKGSLCDYLK  300 (534)
T ss_pred             HHHHHHHHhHHHHHhccCccchhHHHhhchhcc----------------------CCccccceeEEeeeccCCcHHHHHH
Confidence            4556667766666665  357777764432100                      0001236899999999999999987


Q ss_pred             HhCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCccCCCCCCCeEEecCCeeeC
Q psy15406         85 ELEKPLTEQQIRYICHYMCKALQFLHTH---------RVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        85 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~---------~i~h~dik~~nill~~~~~~~i  134 (134)
                      .  ...++.....++..++.|++|||..         .|+|||+|..|||+..++.+.|
T Consensus       301 ~--ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccI  357 (534)
T KOG3653|consen  301 A--NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCI  357 (534)
T ss_pred             h--ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEe
Confidence            5  5788999999999999999999964         4999999999999999987754


No 407
>KOG1167|consensus
Probab=99.36  E-value=2.9e-12  Score=88.80  Aligned_cols=84  Identities=25%  Similarity=0.439  Sum_probs=71.8

Q ss_pred             HHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         41 LWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        41 ~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      .|++++..+. +.|++.+.+++...+.+.++++|.+.....++..    .++...+..+++.++.++.++|.+||+|||+
T Consensus        83 ~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDi  158 (418)
T KOG1167|consen   83 NELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDI  158 (418)
T ss_pred             HHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCC
Confidence            4566666664 6777779999999999999999999977777664    4667888899999999999999999999999


Q ss_pred             CCCCeEEec
Q psy15406        120 KAGNVLLTM  128 (134)
Q Consensus       120 k~~nill~~  128 (134)
                      ||+|++.+.
T Consensus       159 KpsNFL~n~  167 (418)
T KOG1167|consen  159 KPSNFLYNR  167 (418)
T ss_pred             Ccccccccc
Confidence            999999864


No 408
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.36  E-value=6.5e-12  Score=83.47  Aligned_cols=90  Identities=24%  Similarity=0.324  Sum_probs=64.9

Q ss_pred             chHHHHHHHhhCCCCCc--cccceeeee-CC---EEEEEEeccCC-CCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         38 NGKLWIDILSDCKHENI--VQLYEAFFT-NG---KLWMLIEYCDG-GAVDSIMLELEKPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i--~~~~~~~~~-~~---~~~lv~e~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      ...+|+.++..+.++++  +........ .+   ..+++||++++ .++..++..  ..++...    +.+++.++.++|
T Consensus        86 r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~~----~~~i~~~l~~lH  159 (239)
T PRK01723         86 RAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE--APLSEEQ----WQAIGQLIARFH  159 (239)
T ss_pred             HHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc--CCCCHHH----HHHHHHHHHHHH
Confidence            45667888888877664  444444332 22   23599999997 678777643  3444433    567889999999


Q ss_pred             HCCCccCCCCCCCeEEecCCeee
Q psy15406        111 THRVIHRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~~~~~~  133 (134)
                      +.|++|+|+||+||+++.++.++
T Consensus       160 ~~GI~HrDlkp~NILv~~~~~v~  182 (239)
T PRK01723        160 DAGVYHADLNAHNILLDPDGKFW  182 (239)
T ss_pred             HCCCCCCCCCchhEEEcCCCCEE
Confidence            99999999999999998777654


No 409
>KOG0671|consensus
Probab=99.35  E-value=5.5e-12  Score=86.73  Aligned_cols=104  Identities=21%  Similarity=0.308  Sum_probs=80.3

Q ss_pred             HHHHHHHHHhchHHHHHHHhhCCCC------CccccceeeeeCCEEEEEEeccCCCCHHHHHHHh-CCCCCHHHHHHHHH
Q psy15406         28 IVQLYEAFFTNGKLWIDILSDCKHE------NIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLEL-EKPLTEQQIRYICH  100 (134)
Q Consensus        28 i~~~~~~~~~~~~~~~~~~~~~~h~------~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~  100 (134)
                      |++-.+++...+..|+..+.++.+.      -.+++.++|.-.++.|+++|.+. .++.+.+... -.+++...++.++.
T Consensus       121 Iik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~  199 (415)
T KOG0671|consen  121 IIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLG-LSTFDFLKENNYIPFPIDHIRHMGY  199 (415)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccC-hhHHHHhccCCccccchHHHHHHHH
Confidence            3444455555567788888887421      25666777888899999999884 4666766543 34689999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCCeEEecCCee
Q psy15406        101 YMCKALQFLHTHRVIHRDLKAGNVLLTMSGGV  132 (134)
Q Consensus       101 ~i~~~l~~lh~~~i~h~dik~~nill~~~~~~  132 (134)
                      |++.++.|+|+.+++|-|+||+||++-++...
T Consensus       200 QL~~sv~fLh~~kl~HTDLKPENILfvss~~~  231 (415)
T KOG0671|consen  200 QLLESVAFLHDLKLTHTDLKPENILFVSSEYF  231 (415)
T ss_pred             HHHHHHHHHHhcceeecCCChheEEEeccceE
Confidence            99999999999999999999999999765443


No 410
>KOG1290|consensus
Probab=99.33  E-value=8.4e-12  Score=88.32  Aligned_cols=77  Identities=27%  Similarity=0.413  Sum_probs=62.6

Q ss_pred             CCccccceeeee----CCEEEEEEeccCCCCHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCCeE
Q psy15406         52 ENIVQLYEAFFT----NGKLWMLIEYCDGGAVDSIMLE-LEKPLTEQQIRYICHYMCKALQFLHT-HRVIHRDLKAGNVL  125 (134)
Q Consensus        52 ~~i~~~~~~~~~----~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dik~~nil  125 (134)
                      ..|+++++.|..    +.++|+|+|++... |..++.. ..+.++...+..+++|++.|+.|||. +||+|-||||+|+|
T Consensus       142 ~~VV~LlD~FkhsGpNG~HVCMVfEvLGdn-LLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvL  220 (590)
T KOG1290|consen  142 KCVVQLLDHFKHSGPNGQHVCMVFEVLGDN-LLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVL  220 (590)
T ss_pred             ceeeeeeccceecCCCCcEEEEEehhhhhH-HHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceee
Confidence            457888888875    45699999999664 4445544 34578999999999999999999995 69999999999999


Q ss_pred             EecC
Q psy15406        126 LTMS  129 (134)
Q Consensus       126 l~~~  129 (134)
                      +-.+
T Consensus       221 l~~~  224 (590)
T KOG1290|consen  221 LCST  224 (590)
T ss_pred             eecc
Confidence            8544


No 411
>smart00090 RIO RIO-like kinase.
Probab=99.30  E-value=1e-11  Score=82.43  Aligned_cols=90  Identities=16%  Similarity=0.166  Sum_probs=62.8

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHR-VIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~d  118 (134)
                      ..|+.+++.+.+. .+.+...+.. ...+++||+++++++...... ...........++.|++.++.++|..| ++|+|
T Consensus        98 ~~E~~~L~~L~~~-~i~~p~~~~~-~~~~lV~E~~~g~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~D  174 (237)
T smart00090       98 EKEFRNLQRLYEA-GVPVPKPIAW-RRNVLVMEFIGGDGLPAPRLK-DVEPEEEEEFELYDDILEEMRKLYKEGELVHGD  174 (237)
T ss_pred             HHHHHHHHHHHhc-CCCCCeeeEe-cCceEEEEEecCCcccccccc-cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCC
Confidence            4566666666542 2222222222 235799999999877654322 234555666788999999999999999 99999


Q ss_pred             CCCCCeEEecCCeee
Q psy15406        119 LKAGNVLLTMSGGVK  133 (134)
Q Consensus       119 ik~~nill~~~~~~~  133 (134)
                      +||+||+++ ++.++
T Consensus       175 ikp~NIli~-~~~i~  188 (237)
T smart00090      175 LSEYNILVH-DGKVV  188 (237)
T ss_pred             CChhhEEEE-CCCEE
Confidence            999999998 55554


No 412
>KOG1006|consensus
Probab=99.27  E-value=6.9e-12  Score=83.12  Aligned_cols=83  Identities=34%  Similarity=0.602  Sum_probs=63.1

Q ss_pred             CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCCeE
Q psy15406         51 HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLE----LEKPLTEQQIRYICHYMCKALQFLHTH-RVIHRDLKAGNVL  125 (134)
Q Consensus        51 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dik~~nil  125 (134)
                      .|||+++|+....++-.|+.||++.- +++.++.-    ....++++....+.-..+.|+.|+-.. .++|||+||+||+
T Consensus       122 cp~IVkfyGa~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNIL  200 (361)
T KOG1006|consen  122 CPNIVKFYGALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNIL  200 (361)
T ss_pred             CcHHHHHhhhhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheE
Confidence            44455566666777889999999854 55544421    134577887777777788899999855 6999999999999


Q ss_pred             EecCCeeeC
Q psy15406        126 LTMSGGVKL  134 (134)
Q Consensus       126 l~~~~~~~i  134 (134)
                      ++..|.+|+
T Consensus       201 ldr~G~vKL  209 (361)
T KOG1006|consen  201 LDRHGDVKL  209 (361)
T ss_pred             EecCCCEee
Confidence            999998875


No 413
>KOG4158|consensus
Probab=99.27  E-value=7.1e-12  Score=87.28  Aligned_cols=99  Identities=26%  Similarity=0.393  Sum_probs=70.6

Q ss_pred             CchhHHHHHHHHHhchHHHHHHHhhCCCCCc--cccce-eeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHH
Q psy15406         24 KHENIVQLYEAFFTNGKLWIDILSDCKHENI--VQLYE-AFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICH  100 (134)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i--~~~~~-~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~  100 (134)
                      +|||||+++++|.++.+..-+-+-..  |..  -.++. .......+|++|.-.+. +|..++..  ...+......++.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~Y--Pdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~--~~~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERY--PDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT--RHRSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhC--cccccceecccccCCCceEEEehhcchh-hHHHHHhc--CCCchHHHHHHHH
Confidence            59999999999988865432211111  111  11111 12234568999998765 77777765  4566677788899


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCCeEEe
Q psy15406        101 YMCKALQFLHTHRVIHRDLKAGNVLLT  127 (134)
Q Consensus       101 ~i~~~l~~lh~~~i~h~dik~~nill~  127 (134)
                      |+++++.|+|.+|+.|||+|.+||++.
T Consensus       349 QlLEav~hL~~hgvAhRDlKSDNiL~E  375 (598)
T KOG4158|consen  349 QLLEAVTHLHKHGVAHRDLKSDNILLE  375 (598)
T ss_pred             HHHHHHHHHHHccchhhcccccceEEE
Confidence            999999999999999999999999984


No 414
>KOG1164|consensus
Probab=99.25  E-value=4.3e-11  Score=82.75  Aligned_cols=78  Identities=19%  Similarity=0.263  Sum_probs=66.5

Q ss_pred             CCccccceee-eeCCEEEEEEeccCCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         52 ENIVQLYEAF-FTNGKLWMLIEYCDGGAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        52 ~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      ++++.+.+.. ..+.+.|+||+.+ |.+|.++..... ..++..++..++.|++.++.++|+.|++|||+||+|+.++..
T Consensus        80 ~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~  158 (322)
T KOG1164|consen   80 SHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQS  158 (322)
T ss_pred             CCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCC
Confidence            5777788888 4778899999987 558888765444 678999999999999999999999999999999999999765


Q ss_pred             C
Q psy15406        130 G  130 (134)
Q Consensus       130 ~  130 (134)
                      +
T Consensus       159 ~  159 (322)
T KOG1164|consen  159 S  159 (322)
T ss_pred             C
Confidence            3


No 415
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.25  E-value=4.2e-11  Score=88.32  Aligned_cols=73  Identities=26%  Similarity=0.473  Sum_probs=57.0

Q ss_pred             eeCCEEEEEEeccCCCCHHHHHHHhCCCC-------------------CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q psy15406         62 FTNGKLWMLIEYCDGGAVDSIMLELEKPL-------------------TEQQIRYICHYMCKALQFLHTHRVIHRDLKAG  122 (134)
Q Consensus        62 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~-------------------~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~  122 (134)
                      ..+...++++||+++++|.+++.......                   ....+..++.|++.++.|+|+.+++||||||+
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~  284 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ  284 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence            34567899999999999988775432111                   12345578999999999999999999999999


Q ss_pred             CeEEec-CCeeeC
Q psy15406        123 NVLLTM-SGGVKL  134 (134)
Q Consensus       123 nill~~-~~~~~i  134 (134)
                      ||+++. ++.+||
T Consensus       285 NILl~~~~~~~KL  297 (566)
T PLN03225        285 NIIFSEGSGSFKI  297 (566)
T ss_pred             HEEEeCCCCcEEE
Confidence            999985 466654


No 416
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.21  E-value=1.9e-10  Score=77.80  Aligned_cols=89  Identities=38%  Similarity=0.758  Sum_probs=71.4

Q ss_pred             HHHHHhhCCCC-CccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy15406         42 WIDILSDCKHE-NIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE--KPLTEQQIRYICHYMCKALQFLHTHRVIHRD  118 (134)
Q Consensus        42 ~~~~~~~~~h~-~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  118 (134)
                      |+.+++.+.|+ +++.+.+.+......+++++++.++++........  ..+.......+..|++.++.++|..+++|||
T Consensus        47 e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd  126 (384)
T COG0515          47 EIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRD  126 (384)
T ss_pred             HHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            33344444444 46668888877777899999999999986554422  1678899999999999999999999999999


Q ss_pred             CCCCCeEEecCC
Q psy15406        119 LKAGNVLLTMSG  130 (134)
Q Consensus       119 ik~~nill~~~~  130 (134)
                      +||+|++++..+
T Consensus       127 ~kp~nil~~~~~  138 (384)
T COG0515         127 IKPENILLDRDG  138 (384)
T ss_pred             CCHHHeeecCCC
Confidence            999999998776


No 417
>KOG1163|consensus
Probab=99.18  E-value=1.7e-10  Score=75.82  Aligned_cols=77  Identities=16%  Similarity=0.300  Sum_probs=67.1

Q ss_pred             CCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         52 ENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        52 ~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      ..++.+..+...+.+..+||+++ |.+|.+++.-..+.++..+++.++.|++..+.|+|..+.+||||||+|++.+-+
T Consensus        71 ~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlg  147 (341)
T KOG1163|consen   71 VGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLG  147 (341)
T ss_pred             CCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccc
Confidence            45666777777788888999988 669999887777889999999999999999999999999999999999998644


No 418
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.16  E-value=1.1e-10  Score=75.34  Aligned_cols=85  Identities=15%  Similarity=0.185  Sum_probs=63.0

Q ss_pred             hHHHHHHHhhCCCCC--ccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         39 GKLWIDILSDCKHEN--IVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ...|+.++..+.+++  ++...+    ....+++|||++++++.....       ......++.++..++.++|..|++|
T Consensus        80 ~~~E~~~l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~gi~H  148 (198)
T cd05144          80 AQKEFAALKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKHGIIH  148 (198)
T ss_pred             HHHHHHHHHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHCCCCc
Confidence            456777777777664  333322    344689999999988765421       1234567788999999999999999


Q ss_pred             CCCCCCCeEEecCCeeeC
Q psy15406        117 RDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       117 ~dik~~nill~~~~~~~i  134 (134)
                      +|++|+|++++.++.+++
T Consensus       149 ~Dl~p~Nill~~~~~~~l  166 (198)
T cd05144         149 GDLSEFNILVDDDEKIYI  166 (198)
T ss_pred             CCCCcccEEEcCCCcEEE
Confidence            999999999998877653


No 419
>KOG0670|consensus
Probab=99.14  E-value=2e-10  Score=82.38  Aligned_cols=76  Identities=21%  Similarity=0.338  Sum_probs=61.2

Q ss_pred             ccccceeeeeCCEEEEEEeccCCCCHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCC
Q psy15406         54 IVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELE--KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus        54 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~  130 (134)
                      .+.++..|....++|+|+|.+.- +|-..+.+.+  -.+....+..|..|+..|+.+|-.+|++|.||||+|||++...
T Consensus       496 clrl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k  573 (752)
T KOG0670|consen  496 CLRLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK  573 (752)
T ss_pred             HHHHHHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc
Confidence            34455566677889999998865 5666665543  3466788999999999999999999999999999999998663


No 420
>KOG0590|consensus
Probab=99.12  E-value=3.6e-11  Score=88.97  Aligned_cols=93  Identities=25%  Similarity=0.360  Sum_probs=74.1

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDL  119 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~di  119 (134)
                      ..|+-+-..+.|+|++.....+.......-.||||++ +|..++.. ...+....+.+++.|++.|+.|+|..|+.|||+
T Consensus       369 ~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~-~~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrdl  446 (601)
T KOG0590|consen  369 TSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMS-NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDL  446 (601)
T ss_pred             hhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhc-ccccchhhhhHHHHHHHHHHHHHHhcCceeccC
Confidence            3445555667788877776666655444445999999 88877654 346788889999999999999999999999999


Q ss_pred             CCCCeEEecCCeeeC
Q psy15406        120 KAGNVLLTMSGGVKL  134 (134)
Q Consensus       120 k~~nill~~~~~~~i  134 (134)
                      |++|+++..+|.+||
T Consensus       447 K~enll~~~~g~lki  461 (601)
T KOG0590|consen  447 KLENLLVTENGILKI  461 (601)
T ss_pred             ccccEEEecCCceEE
Confidence            999999999988774


No 421
>KOG1165|consensus
Probab=99.05  E-value=1.1e-09  Score=74.84  Aligned_cols=80  Identities=20%  Similarity=0.326  Sum_probs=69.8

Q ss_pred             CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         50 KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      ..++|+++|-+...+.+.-+|+|++ |.+|.+++.-.++.++..++..++.|++..+.++|.+.++.|||||+|+|++.-
T Consensus        82 g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp  160 (449)
T KOG1165|consen   82 GTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRP  160 (449)
T ss_pred             CCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCC
Confidence            4678888887666666777999987 669999887778899999999999999999999999999999999999999754


Q ss_pred             C
Q psy15406        130 G  130 (134)
Q Consensus       130 ~  130 (134)
                      +
T Consensus       161 ~  161 (449)
T KOG1165|consen  161 G  161 (449)
T ss_pred             C
Confidence            4


No 422
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=99.02  E-value=9.7e-10  Score=67.19  Aligned_cols=73  Identities=22%  Similarity=0.383  Sum_probs=56.6

Q ss_pred             CccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCCCCeEEecC
Q psy15406         53 NIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTH---RVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        53 ~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dik~~nill~~~  129 (134)
                      ++++++.....++..++++|+++++.+...        +......+..++..++..+|..   +++|+|++|+|++++..
T Consensus        54 ~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~  125 (155)
T cd05120          54 PVPKVLASGESDGWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG  125 (155)
T ss_pred             CCCeEEEEcCCCCccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC
Confidence            555577666666789999999988766432        3455566778899999999985   69999999999999876


Q ss_pred             Ceee
Q psy15406        130 GGVK  133 (134)
Q Consensus       130 ~~~~  133 (134)
                      +.++
T Consensus       126 ~~~~  129 (155)
T cd05120         126 KILG  129 (155)
T ss_pred             cEEE
Confidence            6554


No 423
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.91  E-value=3.6e-08  Score=70.91  Aligned_cols=124  Identities=17%  Similarity=0.242  Sum_probs=70.8

Q ss_pred             hhHHHHHHHHHHHHhhc--------------CchhHHHHHHHHHhch---HHHHHHHhhC----CCCCccccceeee-eC
Q psy15406          7 EEELSDFMIEIDILSDC--------------KHENIVQLYEAFFTNG---KLWIDILSDC----KHENIVQLYEAFF-TN   64 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l--------------~~~~i~~~~~~~~~~~---~~~~~~~~~~----~h~~i~~~~~~~~-~~   64 (134)
                      +...+.+..++++++.+              +.+.++.-+...+...   ..|...+.++    ++.+-+.+...+. ..
T Consensus       151 p~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~  230 (437)
T TIGR01982       151 PGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRT  230 (437)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhc
Confidence            44556677777776644              3344444444333221   2333333333    3333333333332 23


Q ss_pred             CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHH-HHHHHHHCCCccCCCCCCCeEEecCCeee
Q psy15406         65 GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCK-ALQFLHTHRVIHRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus        65 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~l~~lh~~~i~h~dik~~nill~~~~~~~  133 (134)
                      +..+++|||++|+++.+............   .+...++. .+..+|..|++|+|++|+||+++.+|.++
T Consensus       231 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~---~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~  297 (437)
T TIGR01982       231 SERVLTMEWIDGIPLSDIAALDEAGLDRK---ALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKII  297 (437)
T ss_pred             CCceEEEEeECCcccccHHHHHhcCCCHH---HHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEE
Confidence            44689999999998877654321222222   23333333 35678899999999999999998888765


No 424
>KOG3087|consensus
Probab=98.86  E-value=4.6e-08  Score=62.20  Aligned_cols=109  Identities=20%  Similarity=0.299  Sum_probs=77.7

Q ss_pred             hhcCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCC-CCHHHHHHHhCCC-CCHHHHHHH
Q psy15406         21 SDCKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDG-GAVDSIMLELEKP-LTEQQIRYI   98 (134)
Q Consensus        21 ~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~l~~~~~~~~~~-~~~~~~~~~   98 (134)
                      ++-+||.+-.-.  ...+.++|..++..+.--.|....-++.+...-++.|||.++ .++.+++...... ........+
T Consensus        41 K~YRHP~LD~kL--tr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~  118 (229)
T KOG3087|consen   41 KRYRHPALDQKL--TRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAEL  118 (229)
T ss_pred             ccccchHHHHHH--HHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHH
Confidence            446788766422  223567888888888776776666677777778899999987 3555555442222 223333567


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCCeEEecCCe
Q psy15406         99 CHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGG  131 (134)
Q Consensus        99 ~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~  131 (134)
                      +..+-..+.-+|.++++|+|+..+||++.++|.
T Consensus       119 ~~~iG~~igklH~ndiiHGDLTTSNill~~~~~  151 (229)
T KOG3087|consen  119 ARRIGELIGKLHDNDIIHGDLTTSNILLRSDGN  151 (229)
T ss_pred             HHHHHHHHHHhhhCCeecccccccceEEecCCC
Confidence            777778899999999999999999999987654


No 425
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.85  E-value=1.6e-08  Score=64.52  Aligned_cols=106  Identities=16%  Similarity=0.164  Sum_probs=64.0

Q ss_pred             HHHhhcCchhHHHHHHHHHhchHHHHHHHhhCCCCC--ccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHH
Q psy15406         18 DILSDCKHENIVQLYEAFFTNGKLWIDILSDCKHEN--IVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQI   95 (134)
Q Consensus        18 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~   95 (134)
                      ..+....+++.........   ..|...+..+.+..  +.+.+..    ...+++|||++++.+....... ... ....
T Consensus        46 ~~~~~~~~~~~~~~~~~~~---~~e~~~l~~l~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~-~~~-~~~~  116 (187)
T cd05119          46 DYRFGRKKSNWRYLSRLWA---EKEFRNLKRLYEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKD-VRL-LEDP  116 (187)
T ss_pred             HHHhccCCcchhhhhhHHH---HHHHHHHHHHHHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhh-hhh-cccH
Confidence            4555556666554332221   23344444443322  3333322    2358999999985432111110 011 1556


Q ss_pred             HHHHHHHHHHHHHHHH-CCCccCCCCCCCeEEecCCeee
Q psy15406         96 RYICHYMCKALQFLHT-HRVIHRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus        96 ~~~~~~i~~~l~~lh~-~~i~h~dik~~nill~~~~~~~  133 (134)
                      ..++.+++.++.++|. .+++|+|++|+|++++ ++.++
T Consensus       117 ~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~  154 (187)
T cd05119         117 EELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVY  154 (187)
T ss_pred             HHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEE
Confidence            7788999999999999 9999999999999998 66554


No 426
>KOG1023|consensus
Probab=98.83  E-value=1.3e-08  Score=73.39  Aligned_cols=88  Identities=24%  Similarity=0.354  Sum_probs=79.1

Q ss_pred             hhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCCCCeE
Q psy15406         47 SDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRV-IHRDLKAGNVL  125 (134)
Q Consensus        47 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-~h~dik~~nil  125 (134)
                      +.+.|.|+.++.+.+..+...+++.+||..|++.+.+......+++.+...+.+.++.|+.|+|...+ .|+.++..|.+
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nCl   81 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCL   81 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccce
Confidence            45677777779999999999999999999999999998767778899999999999999999998876 89999999999


Q ss_pred             EecCCeeeC
Q psy15406        126 LTMSGGVKL  134 (134)
Q Consensus       126 l~~~~~~~i  134 (134)
                      ++..+.+|+
T Consensus        82 vd~~w~lkl   90 (484)
T KOG1023|consen   82 VDSRWVLKL   90 (484)
T ss_pred             eeeeEEEEe
Confidence            999988875


No 427
>KOG1024|consensus
Probab=98.79  E-value=4.7e-08  Score=68.43  Aligned_cols=93  Identities=23%  Similarity=0.309  Sum_probs=73.5

Q ss_pred             HHHHHhhCCCCCccccceeeee-CCEEEEEEeccCCCCHHHHHHHh-------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy15406         42 WIDILSDCKHENIVQLYEAFFT-NGKLWMLIEYCDGGAVDSIMLEL-------EKPLTEQQIRYICHYMCKALQFLHTHR  113 (134)
Q Consensus        42 ~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~lh~~~  113 (134)
                      |--++....|||+.++.+.... ....++...+...|+|..++...       .+.+...+...++.|+..|+.|+|..|
T Consensus       337 es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~  416 (563)
T KOG1024|consen  337 ESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG  416 (563)
T ss_pred             HHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC
Confidence            3444555679999999887764 45677888888889999887622       133556677788999999999999999


Q ss_pred             CccCCCCCCCeEEecCCeeeC
Q psy15406        114 VIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       114 i~h~dik~~nill~~~~~~~i  134 (134)
                      ++|.||.++|.++++.-++|+
T Consensus       417 ViHkDiAaRNCvIdd~LqVkl  437 (563)
T KOG1024|consen  417 VIHKDIAARNCVIDDQLQVKL  437 (563)
T ss_pred             cccchhhhhcceehhheeEEe
Confidence            999999999999998876664


No 428
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.77  E-value=2.4e-08  Score=73.19  Aligned_cols=59  Identities=17%  Similarity=0.272  Sum_probs=39.7

Q ss_pred             CEEEEEEeccCCCCHHHHHHHhCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCC
Q psy15406         65 GKLWMLIEYCDGGAVDSIMLELEKP-----LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus        65 ~~~~lv~e~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~  130 (134)
                      +..+++|||+.|+.+.+...-....     +.+..+..++.|+       ...|++|+|+||+||+++.+|
T Consensus       234 t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g  297 (537)
T PRK04750        234 SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDP  297 (537)
T ss_pred             CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCC
Confidence            3467999999999887642211112     2233333444444       358999999999999998877


No 429
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.75  E-value=8.3e-08  Score=61.94  Aligned_cols=86  Identities=12%  Similarity=0.158  Sum_probs=59.5

Q ss_pred             chHHHHHHHhhCCCC--CccccceeeeeCCEEEEEEeccCCCCHHH-HHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHCC
Q psy15406         38 NGKLWIDILSDCKHE--NIVQLYEAFFTNGKLWMLIEYCDGGAVDS-IMLELEKPLTEQQIRYICHYMCKALQFL-HTHR  113 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~  113 (134)
                      .+..|...|+++...  +++.++..    ...+++||++.++.+.. .+.+  ..++......+..+++.++..+ |..|
T Consensus        72 wa~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~g  145 (197)
T cd05146          72 WAEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECN  145 (197)
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            456777788777643  44444442    44679999998654322 2222  2344455566778899999888 8999


Q ss_pred             CccCCCCCCCeEEecC
Q psy15406        114 VIHRDLKAGNVLLTMS  129 (134)
Q Consensus       114 i~h~dik~~nill~~~  129 (134)
                      ++|+|+++.||++..+
T Consensus       146 lVHGDLs~~NIL~~~~  161 (197)
T cd05146         146 LVHADLSEYNMLWHDG  161 (197)
T ss_pred             eecCCCCHHHEEEECC
Confidence            9999999999999743


No 430
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.73  E-value=2.3e-07  Score=59.03  Aligned_cols=98  Identities=14%  Similarity=0.192  Sum_probs=69.2

Q ss_pred             cCchhHHHHHHHHHhchHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHH
Q psy15406         23 CKHENIVQLYEAFFTNGKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYM  102 (134)
Q Consensus        23 l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i  102 (134)
                      -+||.+-.-.  -..+..+|..+++.++--.+....=+..+.+...++|||.++..+.+.+...    .    ..++..+
T Consensus        32 YR~p~LD~kl--rr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~----~----~~~~r~v  101 (204)
T COG3642          32 YRHPELDEKL--RRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA----R----PDLLREV  101 (204)
T ss_pred             cCChHHHHHH--HHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc----c----hHHHHHH
Confidence            4566655321  1234567777887776666665555666677788999999998887776542    1    2344555


Q ss_pred             HHHHHHHHHCCCccCCCCCCCeEEecCC
Q psy15406        103 CKALQFLHTHRVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus       103 ~~~l~~lh~~~i~h~dik~~nill~~~~  130 (134)
                      -.-+.-+|.+|++|+|+.++|+++..++
T Consensus       102 G~~vg~lH~~givHGDLTtsNiIl~~~~  129 (204)
T COG3642         102 GRLVGKLHKAGIVHGDLTTSNIILSGGR  129 (204)
T ss_pred             HHHHHHHHhcCeecCCCccceEEEeCCc
Confidence            5567789999999999999999998764


No 431
>KOG1166|consensus
Probab=98.71  E-value=2e-08  Score=77.32  Aligned_cols=71  Identities=23%  Similarity=0.344  Sum_probs=60.3

Q ss_pred             cceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEec
Q psy15406         57 LYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTM  128 (134)
Q Consensus        57 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~  128 (134)
                      +.......+.-+++++|.+.|+|.++.- ......+..+..+..|++.-+..+|..+|+|+||||+|+++..
T Consensus       759 ~~~a~~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~  829 (974)
T KOG1166|consen  759 ISSAHVFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRR  829 (974)
T ss_pred             HHHHHccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeec
Confidence            4444445566779999999999998864 4567889999999999999999999999999999999999864


No 432
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.66  E-value=5.2e-07  Score=58.77  Aligned_cols=92  Identities=16%  Similarity=0.191  Sum_probs=64.0

Q ss_pred             chHHHHHHHhhCCCCCccc--cceeeeeC----CEEEEEEeccCCC-CHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Q psy15406         38 NGKLWIDILSDCKHENIVQ--LYEAFFTN----GKLWMLIEYCDGG-AVDSIMLELEKPLTEQQIRYICHYMCKALQFLH  110 (134)
Q Consensus        38 ~~~~~~~~~~~~~h~~i~~--~~~~~~~~----~~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh  110 (134)
                      .+.+|...+..+...+|..  +..+....    ...++++|.+++. ++...+... ...+......++.++...+.-+|
T Consensus        57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~-~~~~~~~~~~ll~~l~~~i~~lH  135 (206)
T PF06293_consen   57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW-EQLDPSQRRELLRALARLIAKLH  135 (206)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh-cccchhhHHHHHHHHHHHHHHHH
Confidence            3455666666655443332  33333321    2358999999874 677766542 22555667778889999999999


Q ss_pred             HCCCccCCCCCCCeEEecCC
Q psy15406        111 THRVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus       111 ~~~i~h~dik~~nill~~~~  130 (134)
                      .+|+.|+|+++.||+++.++
T Consensus       136 ~~gi~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  136 DAGIYHGDLNPSNILVDPDD  155 (206)
T ss_pred             HCcCCCCCCCcccEEEeCCC
Confidence            99999999999999998775


No 433
>KOG1266|consensus
Probab=98.66  E-value=6.4e-08  Score=66.48  Aligned_cols=92  Identities=22%  Similarity=0.459  Sum_probs=75.4

Q ss_pred             HHHHhhCCCCCccccceeeeeCC-----EEEEEEeccCCCCHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCC-
Q psy15406         43 IDILSDCKHENIVQLYEAFFTNG-----KLWMLIEYCDGGAVDSIMLEL---EKPLTEQQIRYICHYMCKALQFLHTHR-  113 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~-  113 (134)
                      .+-+-++.|.|+++++.+|.+..     ..-++.||+..|++.+++...   ...+.......|..|+..|+.|||+.. 
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P  197 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence            44555667899999999887643     477899999999998887542   234677778889999999999999885 


Q ss_pred             -CccCCCCCCCeEEecCCeeeC
Q psy15406        114 -VIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       114 -i~h~dik~~nill~~~~~~~i  134 (134)
                       ++|+++..+.+++..+|.+||
T Consensus       198 piihgnlTc~tifiq~ngLIki  219 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKI  219 (458)
T ss_pred             ccccCCcchhheeecCCceEEe
Confidence             899999999999999888875


No 434
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.63  E-value=7.6e-07  Score=60.26  Aligned_cols=90  Identities=10%  Similarity=0.102  Sum_probs=62.2

Q ss_pred             hHHHHHHHhhCCCCCcccc--ceeeee-----CCEEEEEEeccCCC-CHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHH
Q psy15406         39 GKLWIDILSDCKHENIVQL--YEAFFT-----NGKLWMLIEYCDGG-AVDSIMLEL-EKPLTEQQIRYICHYMCKALQFL  109 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~--~~~~~~-----~~~~~lv~e~~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~l  109 (134)
                      +.+|...+..+...+|...  ..+...     ....+++||++++. ++.+++... ....+......++.++...+.-+
T Consensus        75 a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~L  154 (268)
T PRK15123         75 ADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDM  154 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            4456666666544343333  223322     23478999999875 677766421 23345566677888999999999


Q ss_pred             HHCCCccCCCCCCCeEEec
Q psy15406        110 HTHRVIHRDLKAGNVLLTM  128 (134)
Q Consensus       110 h~~~i~h~dik~~nill~~  128 (134)
                      |..|++|+|++++||+++.
T Consensus       155 H~~Gi~HgDL~~~NiLl~~  173 (268)
T PRK15123        155 HAAGINHRDCYICHFLLHL  173 (268)
T ss_pred             HHCcCccCCCChhhEEEec
Confidence            9999999999999999975


No 435
>KOG3741|consensus
Probab=98.60  E-value=2e-07  Score=67.40  Aligned_cols=92  Identities=15%  Similarity=0.249  Sum_probs=68.9

Q ss_pred             HHHHhhCCCCCccccceeee----eCCEEEEEEeccCC-CCHHHHHHHh--------------CCCCCHHHHHHHHHHHH
Q psy15406         43 IDILSDCKHENIVQLYEAFF----TNGKLWMLIEYCDG-GAVDSIMLEL--------------EKPLTEQQIRYICHYMC  103 (134)
Q Consensus        43 ~~~~~~~~h~~i~~~~~~~~----~~~~~~lv~e~~~~-~~l~~~~~~~--------------~~~~~~~~~~~~~~~i~  103 (134)
                      ++..+.+.|+|+|.+.+.|.    ++..+++|++|.++ ++|.++....              +...++...+.++.|+.
T Consensus       324 ve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLt  403 (655)
T KOG3741|consen  324 VEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLT  403 (655)
T ss_pred             HHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHH
Confidence            34445555666666665555    35678999999885 5566655321              12367899999999999


Q ss_pred             HHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        104 KALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       104 ~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .++.++|+.|+.-+-+.+.+|++..+.+++|
T Consensus       404 aaL~sIHssGLAck~L~~~kIlv~G~~RIri  434 (655)
T KOG3741|consen  404 AALYSIHSSGLACKTLDLKKILVTGKMRIRI  434 (655)
T ss_pred             HHHHHHHhcCceeecccHhHeEeeCcceEEE
Confidence            9999999999999999999999988877654


No 436
>KOG1243|consensus
Probab=98.60  E-value=2.9e-07  Score=68.03  Aligned_cols=89  Identities=22%  Similarity=0.369  Sum_probs=68.0

Q ss_pred             HHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCC
Q psy15406         40 KLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLH-THRVIHRD  118 (134)
Q Consensus        40 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~d  118 (134)
                      ++-++-++.++||+|+++++.+..++..|+++|-+..  +...+...    .......-+.||+.|+.||| +++++|++
T Consensus        57 ~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~l----~~~~v~~Gl~qIl~AL~FL~~d~~lvHgN  130 (690)
T KOG1243|consen   57 KRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKEL----GKEEVCLGLFQILAALSFLNDDCNLVHGN  130 (690)
T ss_pred             HHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHHh----HHHHHHHHHHHHHHHHHHHhccCCeeecc
Confidence            3345556666677777788899999999999998753  45555442    25556667889999999998 66799999


Q ss_pred             CCCCCeEEecCCeeeC
Q psy15406        119 LKAGNVLLTMSGGVKL  134 (134)
Q Consensus       119 ik~~nill~~~~~~~i  134 (134)
                      +..+.++++..|.-+|
T Consensus       131 v~~~SVfVn~~GeWkL  146 (690)
T KOG1243|consen  131 VCKDSVFVNESGEWKL  146 (690)
T ss_pred             EeeeeEEEcCCCcEEE
Confidence            9999999998887653


No 437
>KOG0603|consensus
Probab=98.57  E-value=3.8e-08  Score=71.84  Aligned_cols=95  Identities=29%  Similarity=0.406  Sum_probs=81.6

Q ss_pred             chHHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy15406         38 NGKLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIH  116 (134)
Q Consensus        38 ~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  116 (134)
                      ..+.|-.++...+ ||+++.++..++.++..++++++..+|.+.....+ ...+.+.....+...++.++.++|..++++
T Consensus        42 ~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiy  120 (612)
T KOG0603|consen   42 HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAY  120 (612)
T ss_pred             ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence            3455677788887 99999999999999999999999999988776544 244667778888899999999999999999


Q ss_pred             CCCCCCCeEEecCCeee
Q psy15406        117 RDLKAGNVLLTMSGGVK  133 (134)
Q Consensus       117 ~dik~~nill~~~~~~~  133 (134)
                      ||+|++||+++.+|.++
T Consensus       121 rd~k~enilld~~Ghi~  137 (612)
T KOG0603|consen  121 RDYKLENVLLLLEGHIK  137 (612)
T ss_pred             hcccccceeecccCccc
Confidence            99999999999999765


No 438
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.57  E-value=3.1e-07  Score=57.89  Aligned_cols=52  Identities=37%  Similarity=0.549  Sum_probs=45.6

Q ss_pred             CCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         77 GAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        77 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      |+|.+++......+++..+..++.|++.|+.|+|+.+      ||+||+++.++.+++
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~   52 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL   52 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee
Confidence            5788887665567999999999999999999999998      999999999887764


No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.51  E-value=3.5e-07  Score=57.34  Aligned_cols=57  Identities=25%  Similarity=0.360  Sum_probs=42.0

Q ss_pred             EEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----ccCCCCCCCeEEecCCee
Q psy15406         66 KLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRV-----IHRDLKAGNVLLTMSGGV  132 (134)
Q Consensus        66 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-----~h~dik~~nill~~~~~~  132 (134)
                      ..+++||++++.++...  .    .   .......++..++..+|..++     +|+|++|+|++++ ++.+
T Consensus        65 ~~~lv~e~i~G~~l~~~--~----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~  126 (170)
T cd05151          65 TGVLITEFIEGSELLTE--D----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRL  126 (170)
T ss_pred             CCeEEEEecCCCccccc--c----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeE
Confidence            35799999999766532  0    1   112345678889999999885     9999999999998 4444


No 440
>KOG0195|consensus
Probab=98.43  E-value=1.8e-07  Score=62.88  Aligned_cols=88  Identities=17%  Similarity=0.236  Sum_probs=66.5

Q ss_pred             HhhCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCC
Q psy15406         46 LSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK-PLTEQQIRYICHYMCKALQFLHTHR--VIHRDLKAG  122 (134)
Q Consensus        46 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dik~~  122 (134)
                      ++-+.||||..+.+.|.....+.++..|++.|+|+..+..... .....++..++-.++.|+.|+|+..  +....+...
T Consensus       241 lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~  320 (448)
T KOG0195|consen  241 LRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSK  320 (448)
T ss_pred             eeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccc
Confidence            3444556666677788888888999999999999998865322 2356777788889999999999875  445567778


Q ss_pred             CeEEecCCeee
Q psy15406        123 NVLLTMSGGVK  133 (134)
Q Consensus       123 nill~~~~~~~  133 (134)
                      .++++++-..+
T Consensus       321 hvmidedltar  331 (448)
T KOG0195|consen  321 HVMIDEDLTAR  331 (448)
T ss_pred             eEEecchhhhh
Confidence            88888876554


No 441
>KOG0590|consensus
Probab=98.27  E-value=1.1e-07  Score=70.75  Aligned_cols=96  Identities=26%  Similarity=0.350  Sum_probs=78.0

Q ss_pred             chHHHHHHHhhCC-CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH-HCCC
Q psy15406         38 NGKLWIDILSDCK-HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK-PLTEQQIRYICHYMCKALQFLH-THRV  114 (134)
Q Consensus        38 ~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh-~~~i  114 (134)
                      +...|..+-..+. |+|++..++........++.+++..++++......... ..+......++.|+..++.|+| ..++
T Consensus        66 ~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~  145 (601)
T KOG0590|consen   66 HIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGV  145 (601)
T ss_pred             hcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccccc
Confidence            3344666666676 99999999999999999999999888888766522222 5567777889999999999999 9999


Q ss_pred             ccCCCCCCCeEEecCC-eee
Q psy15406        115 IHRDLKAGNVLLTMSG-GVK  133 (134)
Q Consensus       115 ~h~dik~~nill~~~~-~~~  133 (134)
                      .|+|++|+|.+++.++ ..+
T Consensus       146 ~h~~ikP~n~~l~~s~~~l~  165 (601)
T KOG0590|consen  146 THRDIKPSNSLLDESGSALK  165 (601)
T ss_pred             ccCCCCCccchhccCCCccc
Confidence            9999999999998887 443


No 442
>KOG1240|consensus
Probab=98.16  E-value=3.9e-07  Score=70.85  Aligned_cols=81  Identities=21%  Similarity=0.255  Sum_probs=58.7

Q ss_pred             hCCCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEe
Q psy15406         48 DCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLT  127 (134)
Q Consensus        48 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~  127 (134)
                      -+++||...+...-.++...|++-+|... +|++++..+ .-+....-+-++.|++.|+.-+|..|++|+|||.+||++.
T Consensus        77 l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlSTR-PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT  154 (1431)
T KOG1240|consen   77 LMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLSTR-PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT  154 (1431)
T ss_pred             hhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe
Confidence            34566666665555555666777777766 677776542 2234445556788999999999999999999999999997


Q ss_pred             cCC
Q psy15406        128 MSG  130 (134)
Q Consensus       128 ~~~  130 (134)
                      +-+
T Consensus       155 SWN  157 (1431)
T KOG1240|consen  155 SWN  157 (1431)
T ss_pred             eec
Confidence            543


No 443
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.11  E-value=1.3e-05  Score=51.53  Aligned_cols=87  Identities=16%  Similarity=0.238  Sum_probs=52.6

Q ss_pred             hchHHHHHHHhhCCCC--CccccceeeeeCCEEEEEEeccC--CCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHH
Q psy15406         37 TNGKLWIDILSDCKHE--NIVQLYEAFFTNGKLWMLIEYCD--GGAVDSIMLELEKPLTEQQIRYICHYMCKALQF-LHT  111 (134)
Q Consensus        37 ~~~~~~~~~~~~~~h~--~i~~~~~~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-lh~  111 (134)
                      ..+..|...|..+...  +++.++..  .  ...++|||++  +..+..+ ...  .+.......+..+++..+.. +|.
T Consensus        53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~--~--~~~ivME~I~~~G~~~~~l-~~~--~~~~~~~~~~~~~il~~~~~~~~~  125 (188)
T PF01163_consen   53 EWAKKEFRNLKRLYEAGVPVPKPYDY--N--RNVIVMEYIGEDGVPLPRL-KDV--DLSPEEPKELLEEILEEIIKMLHK  125 (188)
T ss_dssp             HHHHHHHHHHHHCCCTT-SS--EEEE--E--TTEEEEE--EETTEEGGCH-HHC--GGGGSTHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHCCccCCcEEEE--e--CCEEEEEecCCCccchhhH-Hhc--cccchhHHHHHHHHHHHHHHHHHh
Confidence            3567788888888765  45555433  2  2469999998  5445443 231  11123334455566664444 579


Q ss_pred             CCCccCCCCCCCeEEecCC
Q psy15406        112 HRVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~  130 (134)
                      .|++|+|+.+.||+++.++
T Consensus       126 ~givHGDLs~~NIlv~~~~  144 (188)
T PF01163_consen  126 AGIVHGDLSEYNILVDDGK  144 (188)
T ss_dssp             TTEEESS-STTSEEEETTC
T ss_pred             cCceecCCChhhEEeecce
Confidence            9999999999999998773


No 444
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.82  E-value=6.6e-05  Score=49.38  Aligned_cols=57  Identities=28%  Similarity=0.510  Sum_probs=41.6

Q ss_pred             EEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCe
Q psy15406         66 KLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGG  131 (134)
Q Consensus        66 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~  131 (134)
                      ..+++|||++|-.+.+..     .+.+.    ....+..++.-+|..|+.|+|++|+|+++..++.
T Consensus       117 ~~~ll~EYIeG~~l~d~~-----~i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~i  173 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIE-----DIDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNGI  173 (229)
T ss_pred             EEEEEEEEecCeecccch-----hcCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCcE
Confidence            356899999997664432     12221    2345666788999999999999999999987653


No 445
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.80  E-value=2.4e-05  Score=53.44  Aligned_cols=65  Identities=23%  Similarity=0.358  Sum_probs=40.6

Q ss_pred             EEEEeccCCCCHHHHHH---HhCCC---CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeee
Q psy15406         68 WMLIEYCDGGAVDSIML---ELEKP---LTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus        68 ~lv~e~~~~~~l~~~~~---~~~~~---~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~  133 (134)
                      +++|.-+ .++|.....   .....   .....-..+..|++..++++|..|++|+|++|+|++++.+|.+.
T Consensus       115 ~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~  185 (288)
T PF14531_consen  115 FLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVF  185 (288)
T ss_dssp             EEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EE
T ss_pred             hhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEE
Confidence            4566655 446665543   22222   11122233457888999999999999999999999999999875


No 446
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=97.77  E-value=8.5e-05  Score=50.24  Aligned_cols=87  Identities=16%  Similarity=0.195  Sum_probs=59.0

Q ss_pred             hchHHHHHHHhhCCCC--CccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy15406         37 TNGKLWIDILSDCKHE--NIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRV  114 (134)
Q Consensus        37 ~~~~~~~~~~~~~~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  114 (134)
                      ..+.+|.++|..+...  .++...+.    ....++||+..+-.|...-      +.......++..++..+.-.-..|+
T Consensus       154 l~A~rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~Gi  223 (304)
T COG0478         154 LAAEREFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRRGI  223 (304)
T ss_pred             HHHHHHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHcCc
Confidence            3567888888888765  55555442    3356999999886554321      1233344445555555555558999


Q ss_pred             ccCCCCCCCeEEecCCeee
Q psy15406        115 IHRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus       115 ~h~dik~~nill~~~~~~~  133 (134)
                      +|+|+++=||+++.+|.+.
T Consensus       224 VHGDlSefNIlV~~dg~~~  242 (304)
T COG0478         224 VHGDLSEFNILVTEDGDIV  242 (304)
T ss_pred             cccCCchheEEEecCCCEE
Confidence            9999999999999987653


No 447
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=97.77  E-value=9.9e-05  Score=48.02  Aligned_cols=16  Identities=38%  Similarity=0.671  Sum_probs=14.6

Q ss_pred             CCccCCCCCCCeEEec
Q psy15406        113 RVIHRDLKAGNVLLTM  128 (134)
Q Consensus       113 ~i~h~dik~~nill~~  128 (134)
                      .++|+|+.++|++++.
T Consensus       175 ~l~HgD~~~~Nil~~~  190 (223)
T cd05154         175 GLVHGDYRLGNVLFHP  190 (223)
T ss_pred             EEEECCCCcccEEEcC
Confidence            5799999999999987


No 448
>PRK09902 hypothetical protein; Provisional
Probab=97.74  E-value=0.0005  Score=45.02  Aligned_cols=65  Identities=11%  Similarity=0.151  Sum_probs=49.6

Q ss_pred             EEEEEeccCC-CCHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCe
Q psy15406         67 LWMLIEYCDG-GAVDSIMLELE-KPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGG  131 (134)
Q Consensus        67 ~~lv~e~~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~  131 (134)
                      -+|++|-+++ .+|.+++.+.. ...+...-..+..++...+.-+|+.|+.|+|+-+.||+++.+|.
T Consensus       100 A~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~  166 (216)
T PRK09902        100 ALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGK  166 (216)
T ss_pred             EEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCC
Confidence            6789997664 56776654421 23355555678889999999999999999999999999986654


No 449
>KOG1033|consensus
Probab=97.49  E-value=2.5e-05  Score=56.49  Aligned_cols=67  Identities=18%  Similarity=0.376  Sum_probs=54.3

Q ss_pred             CEEEEEEeccCCCCHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406         65 GKLWMLIEYCDGGAVDSIMLEL--EKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus        65 ~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      .++|+.|++|...+|.+++..+  ....+....+.++.|+..++.|   +|.+|+|+||.||....++.++|
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kI  397 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKI  397 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhh
Confidence            3589999999999999998532  2234567778889999999999   99999999999999877665543


No 450
>KOG0601|consensus
Probab=97.47  E-value=8.5e-05  Score=54.39  Aligned_cols=79  Identities=20%  Similarity=0.352  Sum_probs=64.9

Q ss_pred             CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         50 KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      .|.+++.++..|......|+-.|||++++....... ..-+.+...+.+..|++.++.++|...++|.|++|+||++..+
T Consensus       324 ~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~  402 (524)
T KOG0601|consen  324 SHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND  402 (524)
T ss_pred             cccccCCCCCCccccccccCchhhhcCcchhhhhHH-HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc
Confidence            377888888888888888899999999887655422 2345667777888999999999999999999999999998764


No 451
>KOG1235|consensus
Probab=97.46  E-value=0.00085  Score=49.65  Aligned_cols=101  Identities=16%  Similarity=0.180  Sum_probs=58.7

Q ss_pred             chhHHHHHHHHHhchHHHHHHHh----------hCCCCC------ccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCC
Q psy15406         25 HENIVQLYEAFFTNGKLWIDILS----------DCKHEN------IVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEK   88 (134)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~----------~~~h~~------i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~   88 (134)
                      +-++.-+.+.+-.+..+|++...          .+.|-+      |++++..+.  +.-.++|||+.|..+.+.-.-...
T Consensus       221 ~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~~  298 (538)
T KOG1235|consen  221 DFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDKR  298 (538)
T ss_pred             CCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcC--cceEEEEEecCCccCCCHHHHHHc
Confidence            33456666666666566544443          234444      455554444  346799999999766554322234


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         89 PLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        89 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      ..+...+..-+.+...-+  +-..|.+|.|.+|+||++..+
T Consensus       299 gi~~~~i~~~l~~~~~~q--If~~GffHaDPHPGNilv~~~  337 (538)
T KOG1235|consen  299 GISPHDILNKLVEAYLEQ--IFKTGFFHADPHPGNILVRPN  337 (538)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHhcCCccCCCCCCcEEEecC
Confidence            555554433333322111  235689999999999999853


No 452
>KOG0601|consensus
Probab=97.40  E-value=0.00016  Score=52.96  Aligned_cols=78  Identities=27%  Similarity=0.357  Sum_probs=65.4

Q ss_pred             CCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHH----HHHHHHHCCCccCCCCCCCeEE
Q psy15406         51 HENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCK----ALQFLHTHRVIHRDLKAGNVLL  126 (134)
Q Consensus        51 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~----~l~~lh~~~i~h~dik~~nill  126 (134)
                      |++.+..+..+.+.+.+++-+|+|. .++..+.......++...++..+.+...    |+.++|...++|.|+||+|+..
T Consensus       177 ~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~  255 (524)
T KOG0601|consen  177 HENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT  255 (524)
T ss_pred             cccccccCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec
Confidence            7788888889999999999999986 4666666554455677777777777777    9999999999999999999999


Q ss_pred             ecC
Q psy15406        127 TMS  129 (134)
Q Consensus       127 ~~~  129 (134)
                      ..+
T Consensus       256 ~~~  258 (524)
T KOG0601|consen  256 TSD  258 (524)
T ss_pred             ccc
Confidence            877


No 453
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.14  E-value=0.0019  Score=41.63  Aligned_cols=89  Identities=18%  Similarity=0.093  Sum_probs=63.6

Q ss_pred             HHHHHhhCCC-CCccccceeeeeCCEEEEEEeccCCCCHHHHHH--HhCCCCCHHHHHHHHHHHHHHHHHHHHC---CCc
Q psy15406         42 WIDILSDCKH-ENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIML--ELEKPLTEQQIRYICHYMCKALQFLHTH---RVI  115 (134)
Q Consensus        42 ~~~~~~~~~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~  115 (134)
                      |.-+++.+++ +++++++|.|.    -+++.|+.+.+++.....  ......++.....++.+++..+.+++..   .+.
T Consensus         9 E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~   84 (188)
T PF12260_consen    9 EPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY   84 (188)
T ss_pred             HHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            5566666664 58888888885    246888888665532110  0112356788888999999999998873   467


Q ss_pred             cCCCCCCCeEEecCCeeeC
Q psy15406        116 HRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       116 h~dik~~nill~~~~~~~i  134 (134)
                      -.|++++|+-++.+|.+++
T Consensus        85 lcDv~~~nfgv~~~~~lk~  103 (188)
T PF12260_consen   85 LCDVSPDNFGVNDDGRLKL  103 (188)
T ss_pred             EeecchHHeEEeCCCcEEE
Confidence            7999999999999888764


No 454
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=96.97  E-value=0.0033  Score=46.54  Aligned_cols=66  Identities=18%  Similarity=0.285  Sum_probs=41.4

Q ss_pred             CEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCee
Q psy15406         65 GKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGV  132 (134)
Q Consensus        65 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~  132 (134)
                      +.-.++|||+.|-.+.+.........+...+...+.+..  +.-+-..|..|.|.+|+|++++.+|+.
T Consensus       239 ~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~dgffHaDpHpGNi~v~~~g~i  304 (517)
T COG0661         239 TRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRDGFFHADPHPGNILVRSDGRI  304 (517)
T ss_pred             CCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCccceEEecCCcE
Confidence            446799999999777665432224444333222222221  111224799999999999999988765


No 455
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=96.92  E-value=0.021  Score=37.19  Aligned_cols=74  Identities=23%  Similarity=0.351  Sum_probs=51.8

Q ss_pred             CCCCccccceeeeeCCEEEEEEeccCC------CCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCC
Q psy15406         50 KHENIVQLYEAFFTNGKLWMLIEYCDG------GAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGN  123 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~n  123 (134)
                      .+..+..+++...++.-.-+++|...+      .+|..++..  ..++. .....   +-.-..|+-+++|+.+|++|.|
T Consensus        75 ~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~--~~~~~-~~~~~---L~~f~~~l~~~~Iv~~dl~~~N  148 (199)
T PF10707_consen   75 DWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE--GGLTE-ELRQA---LDEFKRYLLDHHIVIRDLNPHN  148 (199)
T ss_pred             cccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc--CCccH-HHHHH---HHHHHHHHHHcCCeecCCCccc
Confidence            367788899999988777888887653      345666533  34544 33333   3334667788999999999999


Q ss_pred             eEEecC
Q psy15406        124 VLLTMS  129 (134)
Q Consensus       124 ill~~~  129 (134)
                      |++...
T Consensus       149 Iv~~~~  154 (199)
T PF10707_consen  149 IVVQRR  154 (199)
T ss_pred             EEEEec
Confidence            999644


No 456
>KOG0606|consensus
Probab=96.36  E-value=0.0025  Score=50.35  Aligned_cols=32  Identities=44%  Similarity=0.771  Sum_probs=29.2

Q ss_pred             HHHHHHHHHCCCccCCCCCCCeEEecCCeeeC
Q psy15406        103 CKALQFLHTHRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       103 ~~~l~~lh~~~i~h~dik~~nill~~~~~~~i  134 (134)
                      +.++.|+|+-|++|||+||+|+++..-|.+|+
T Consensus       153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKl  184 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKL  184 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCcceeeecccccc
Confidence            67899999999999999999999998888764


No 457
>KOG0584|consensus
Probab=95.96  E-value=0.0018  Score=48.21  Aligned_cols=35  Identities=29%  Similarity=0.617  Sum_probs=30.6

Q ss_pred             cchhHHHHHHHHHHHHhhcCchhHHHHHHHHHhch
Q psy15406          5 EGEEELSDFMIEIDILSDCKHENIVQLYEAFFTNG   39 (134)
Q Consensus         5 ~~~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~~   39 (134)
                      .+++..++|..|+.+|+.|+||||+++|.++.+-.
T Consensus        80 q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~  114 (632)
T KOG0584|consen   80 QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD  114 (632)
T ss_pred             cChHHHHHHHHHHHHHccCCCCceeeeeeheecCC
Confidence            35677899999999999999999999999987653


No 458
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=95.60  E-value=0.12  Score=34.34  Aligned_cols=27  Identities=15%  Similarity=0.347  Sum_probs=19.5

Q ss_pred             ccccceeeeeCCEEEEEEeccCCCCHH
Q psy15406         54 IVQLYEAFFTNGKLWMLIEYCDGGAVD   80 (134)
Q Consensus        54 i~~~~~~~~~~~~~~lv~e~~~~~~l~   80 (134)
                      +++++......+..+++|++++|.++.
T Consensus        54 vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150          54 VPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             CCeEEEEEecCCccEEEEEeeCCccHh
Confidence            445666666556688999999987665


No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=95.56  E-value=0.19  Score=33.35  Aligned_cols=38  Identities=16%  Similarity=0.115  Sum_probs=25.5

Q ss_pred             HHHHHHHhhCCCCC--ccccceeeeeCCEEEEEEeccCCC
Q psy15406         40 KLWIDILSDCKHEN--IVQLYEAFFTNGKLWMLIEYCDGG   77 (134)
Q Consensus        40 ~~~~~~~~~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~   77 (134)
                      .+|.++++.+..-+  ++.++......+..+++|++++|.
T Consensus        40 ~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~   79 (226)
T TIGR02172        40 KREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK   79 (226)
T ss_pred             HHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence            45666666654322  455666666667778999999885


No 460
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=95.38  E-value=0.075  Score=35.95  Aligned_cols=61  Identities=15%  Similarity=0.228  Sum_probs=39.7

Q ss_pred             EEEEEeccCCCC-HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCCeEEecC
Q psy15406         67 LWMLIEYCDGGA-VDSIMLELEKPLTEQQIRYICHYMCKALQFLHT-HRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        67 ~~lv~e~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dik~~nill~~~  129 (134)
                      ..++||+++... -...+.+  -+.....+..+..+++..+.-+-. .+++|.|++.=|||+.++
T Consensus       141 nVLvMEfIg~~g~pAP~LkD--v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~~  203 (268)
T COG1718         141 NVLVMEFIGDDGLPAPRLKD--VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHDG  203 (268)
T ss_pred             CeEEEEeccCCCCCCCCccc--CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEECC
Confidence            458999987542 1222221  122222455566677777766655 899999999999999843


No 461
>KOG0606|consensus
Probab=95.34  E-value=0.0064  Score=48.22  Aligned_cols=83  Identities=23%  Similarity=0.319  Sum_probs=64.7

Q ss_pred             CCCCccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecC
Q psy15406         50 KHENIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~  129 (134)
                      .+|.++.....+......++++++..++.+...+... ......-+..+...++.+..++|...+.|+|++|.|.+..++
T Consensus       862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~-~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~  940 (1205)
T KOG0606|consen  862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNS-GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYD  940 (1205)
T ss_pred             CCCceecccCCCCCCCCcchhhHHhccCCchhhhhcC-CCcccccccchhHHHHhhhhccccchhhcccccccchhhccc
Confidence            4455665555555667899999999999888887654 345666666777788889999999989999999999998877


Q ss_pred             Ceee
Q psy15406        130 GGVK  133 (134)
Q Consensus       130 ~~~~  133 (134)
                      |..+
T Consensus       941 gh~~  944 (1205)
T KOG0606|consen  941 GHRP  944 (1205)
T ss_pred             CCcc
Confidence            7543


No 462
>KOG0575|consensus
Probab=94.63  E-value=0.0048  Score=45.82  Aligned_cols=35  Identities=34%  Similarity=0.485  Sum_probs=31.1

Q ss_pred             ccchhHHHHHHHHHHHHhhcCchhHHHHHHHHHhc
Q psy15406          4 LEGEEELSDFMIEIDILSDCKHENIVQLYEAFFTN   38 (134)
Q Consensus         4 ~~~~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~   38 (134)
                      +.++..++...+||++-++|+|||||++|..|.++
T Consensus        56 l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs   90 (592)
T KOG0575|consen   56 LKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS   90 (592)
T ss_pred             hcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC
Confidence            34667888999999999999999999999999776


No 463
>KOG0585|consensus
Probab=94.62  E-value=0.0078  Score=43.92  Aligned_cols=25  Identities=36%  Similarity=0.518  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHH
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEA   34 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~   34 (134)
                      .+...+||++|++++|||||++++.
T Consensus       152 ~ekv~~EIailKkl~H~nVV~LiEv  176 (576)
T KOG0585|consen  152 IEKVRREIAILKKLHHPNVVKLIEV  176 (576)
T ss_pred             HHHHHHHHHHHHhcCCcCeeEEEEe
Confidence            4678899999999999999997654


No 464
>KOG0659|consensus
Probab=94.51  E-value=0.031  Score=38.06  Aligned_cols=29  Identities=31%  Similarity=0.487  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhc
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTN   38 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~   38 (134)
                      ...++|||+.|+.++|+||+.+.++|-..
T Consensus        45 ~~talREIK~Lqel~h~nIi~LiD~F~~~   73 (318)
T KOG0659|consen   45 NRTALREIKLLQELKHPNIIELIDVFPHK   73 (318)
T ss_pred             cHHHHHHHHHHHHccCcchhhhhhhccCC
Confidence            45789999999999999999999998543


No 465
>KOG0615|consensus
Probab=93.91  E-value=0.0071  Score=43.29  Aligned_cols=27  Identities=37%  Similarity=0.495  Sum_probs=23.0

Q ss_pred             HHHHHHHHHhhcCchhHHHHHHHHHhc
Q psy15406         12 DFMIEIDILSDCKHENIVQLYEAFFTN   38 (134)
Q Consensus        12 ~~~~E~~~~~~l~~~~i~~~~~~~~~~   38 (134)
                      +..+|+++|++|+||+||++++.|...
T Consensus       222 ~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  222 DVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             hhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            357999999999999999988877554


No 466
>KOG0591|consensus
Probab=93.66  E-value=0.036  Score=38.19  Aligned_cols=18  Identities=39%  Similarity=0.388  Sum_probs=16.2

Q ss_pred             hHHHHHHHhhCCCCCccc
Q psy15406         39 GKLWIDILSDCKHENIVQ   56 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~   56 (134)
                      ...|+.++++++||||++
T Consensus        65 ~v~Ei~lLkQL~HpNIVq   82 (375)
T KOG0591|consen   65 CVKEISLLKQLNHPNIVQ   82 (375)
T ss_pred             HHHHHHHHHhcCCchHHH
Confidence            466899999999999987


No 467
>KOG0666|consensus
Probab=92.87  E-value=0.096  Score=36.71  Aligned_cols=29  Identities=28%  Similarity=0.475  Sum_probs=26.3

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhc
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTN   38 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~   38 (134)
                      .-.+.||+.+++.++|||++.+...|++.
T Consensus        71 S~SAcREiaL~REl~h~nvi~Lv~Vfl~~   99 (438)
T KOG0666|consen   71 SMSACREIALLRELKHPNVISLVKVFLSH   99 (438)
T ss_pred             CHHHHHHHHHHHHhcCCcchhHHHHHhcc
Confidence            45688999999999999999999999884


No 468
>KOG0665|consensus
Probab=92.46  E-value=0.0079  Score=41.76  Aligned_cols=30  Identities=20%  Similarity=0.370  Sum_probs=25.9

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHhc
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAFFTN   38 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~   38 (134)
                      ..+++.+|..++..+.|+|+++++.+|+-.
T Consensus        58 ~akra~rel~l~~~v~~~nii~l~n~ftP~   87 (369)
T KOG0665|consen   58 HAKRAYRELKLMKCVNHKNIISLLNVFTPQ   87 (369)
T ss_pred             cchhhhhhhhhhhhhcccceeeeeeccCcc
Confidence            457889999999999999999998888544


No 469
>KOG0586|consensus
Probab=92.29  E-value=0.048  Score=40.82  Aligned_cols=29  Identities=31%  Similarity=0.470  Sum_probs=24.1

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhc
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTN   38 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~   38 (134)
                      +..+.+|+++|+.+.|||||++|+...++
T Consensus        99 ~~k~~rev~imk~l~HPnIvkl~~v~~t~  127 (596)
T KOG0586|consen   99 RQKLGREVDIMKSLNHPNIVKLFSVIETE  127 (596)
T ss_pred             HHHHHHHHHHHHhcCCcceeeeeeeeeec
Confidence            34488999999999999999988776543


No 470
>KOG0576|consensus
Probab=91.79  E-value=0.045  Score=41.77  Aligned_cols=91  Identities=25%  Similarity=0.393  Sum_probs=56.5

Q ss_pred             cCchhHHHHHHHHHhchHHHHHHHhhCCCCC-ccccceeeeeCCEEEEEEeccCCC-CHHHHHHHhCCCCCHHHHHHHHH
Q psy15406         23 CKHENIVQLYEAFFTNGKLWIDILSDCKHEN-IVQLYEAFFTNGKLWMLIEYCDGG-AVDSIMLELEKPLTEQQIRYICH  100 (134)
Q Consensus        23 l~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~-i~~~~~~~~~~~~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~  100 (134)
                      |.||.|..-     -+...++++|.+++||| .+..++.+..+...++.++++..+ +.........-.+.........+
T Consensus       269 L~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r  343 (829)
T KOG0576|consen  269 LQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLR  343 (829)
T ss_pred             eeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhh
Confidence            446655542     23455789999999999 777777888889999999999876 11111111111223333334444


Q ss_pred             HHHHHHHHHHHCCCccCC
Q psy15406        101 YMCKALQFLHTHRVIHRD  118 (134)
Q Consensus       101 ~i~~~l~~lh~~~i~h~d  118 (134)
                      .-..++.++|+..=+|+|
T Consensus       344 ~et~~l~~l~~~~~~~~d  361 (829)
T KOG0576|consen  344 KETRPLAELHSSYKVHRD  361 (829)
T ss_pred             hhcccccccccccccCcc
Confidence            455677888876556776


No 471
>KOG2268|consensus
Probab=91.75  E-value=0.18  Score=35.88  Aligned_cols=85  Identities=11%  Similarity=0.157  Sum_probs=51.1

Q ss_pred             chHHHHHHHhhCCC-C-CccccceeeeeCCEEEEEEeccCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy15406         38 NGKLWIDILSDCKH-E-NIVQLYEAFFTNGKLWMLIEYCDGGAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVI  115 (134)
Q Consensus        38 ~~~~~~~~~~~~~h-~-~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  115 (134)
                      ++.+|...|+.+.- . -+++.++.    ...+++||+..+-.+...-    ..-....+   ...+..-+.-+..+|++
T Consensus       156 aa~kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~----~v~d~~~l---y~~lm~~Iv~la~~GlI  224 (465)
T KOG2268|consen  156 AATKEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVR----HVEDPPTL---YDDLMGLIVRLANHGLI  224 (465)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeee----ecCChHHH---HHHHHHHHHHHHHcCce
Confidence            34556666666652 2 23344433    3467999998876554321    11222222   22233335556789999


Q ss_pred             cCCCCCCCeEEecCCeee
Q psy15406        116 HRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus       116 h~dik~~nill~~~~~~~  133 (134)
                      |+|..-=||++.+++.++
T Consensus       225 HgDFNEFNimv~dd~~i~  242 (465)
T KOG2268|consen  225 HGDFNEFNIMVKDDDKIV  242 (465)
T ss_pred             ecccchheeEEecCCCEE
Confidence            999999999998776543


No 472
>KOG0033|consensus
Probab=91.52  E-value=0.094  Score=35.58  Aligned_cols=29  Identities=24%  Similarity=0.386  Sum_probs=24.0

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHH
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAF   35 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~   35 (134)
                      ..+.++..+|+.+.+.|+||||+++.+..
T Consensus        51 ~~~~e~l~rEarIC~~LqHP~IvrL~~ti   79 (355)
T KOG0033|consen   51 ARDFQKLEREARICRKLQHPNIVRLHDSI   79 (355)
T ss_pred             cccHHHHHHHHHHHHhcCCCcEeehhhhh
Confidence            34667888999999999999999876543


No 473
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=91.37  E-value=0.65  Score=34.26  Aligned_cols=67  Identities=15%  Similarity=0.174  Sum_probs=50.1

Q ss_pred             EEEEEeccCCCC-HHHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEecCCeee
Q psy15406         67 LWMLIEYCDGGA-VDSIMLE-----LEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTMSGGVK  133 (134)
Q Consensus        67 ~~lv~e~~~~~~-l~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~~~~~~  133 (134)
                      ..+.|...++.. ...++..     +-....+.......+.++.+...+|..|..-+|..++|+++.+++.+.
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~  157 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVV  157 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEE
Confidence            556777666532 2222211     112356889999999999999999999999999999999999988775


No 474
>KOG0589|consensus
Probab=90.87  E-value=0.081  Score=38.38  Aligned_cols=32  Identities=34%  Similarity=0.471  Sum_probs=27.7

Q ss_pred             hhHHHHHHHHHHHHhhcCchhHHHHHHHHHhc
Q psy15406          7 EEELSDFMIEIDILSDCKHENIVQLYEAFFTN   38 (134)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~i~~~~~~~~~~   38 (134)
                      ...+..+..|+.++++++|||||.+.+.|...
T Consensus        44 ~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~   75 (426)
T KOG0589|consen   44 EPERRSAIQEMDLLSKLLHPNIVEYKDSFEED   75 (426)
T ss_pred             chhhHHHHHHHHHHHhccCCCeeeeccchhcC
Confidence            34556889999999999999999999999766


No 475
>KOG0198|consensus
Probab=90.65  E-value=0.056  Score=37.70  Aligned_cols=25  Identities=44%  Similarity=0.537  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHH
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEA   34 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~   34 (134)
                      .+...+|+.+|++++|||||++++.
T Consensus        58 ~~~l~~Ei~iL~~l~~p~IV~~~G~   82 (313)
T KOG0198|consen   58 SESLEREIRILSRLNHPNIVQYYGS   82 (313)
T ss_pred             HHHHHHHHHHHHhCCCCCEEeeCCc
Confidence            5668899999999999999999985


No 476
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=89.83  E-value=0.3  Score=32.89  Aligned_cols=31  Identities=29%  Similarity=0.436  Sum_probs=25.2

Q ss_pred             HHHHHHHH--CCCccCCCCCCCeEEecCCeeeC
Q psy15406        104 KALQFLHT--HRVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       104 ~~l~~lh~--~~i~h~dik~~nill~~~~~~~i  134 (134)
                      ..+.-.|+  .+.+|+|..|+||+-+..|.+|+
T Consensus       152 ~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKl  184 (308)
T PF07387_consen  152 KDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKL  184 (308)
T ss_pred             HHHHHhhccCCCeecCCCChhheeecCCCCEEe
Confidence            34556673  36899999999999999999875


No 477
>PLN02876 acyl-CoA dehydrogenase
Probab=89.36  E-value=1.1  Score=35.57  Aligned_cols=39  Identities=18%  Similarity=0.373  Sum_probs=24.8

Q ss_pred             HHHHHHHhhCC-CCCc--cccceeeeeC---CEEEEEEeccCCCC
Q psy15406         40 KLWIDILSDCK-HENI--VQLYEAFFTN---GKLWMLIEYCDGGA   78 (134)
Q Consensus        40 ~~~~~~~~~~~-h~~i--~~~~~~~~~~---~~~~lv~e~~~~~~   78 (134)
                      .+|..+++.+. |.++  ++++..+.+.   +..|++||++++..
T Consensus        86 ~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~  130 (822)
T PLN02876         86 EREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRI  130 (822)
T ss_pred             HHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcc
Confidence            45666666664 4443  5556555543   45789999998754


No 478
>KOG4717|consensus
Probab=86.84  E-value=0.24  Score=37.17  Aligned_cols=29  Identities=31%  Similarity=0.464  Sum_probs=24.0

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHhc
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFTN   38 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~~   38 (134)
                      ......||+.|+-.+|||||++|+.--+.
T Consensus        61 t~hlfqEVRCMKLVQHpNiVRLYEViDTQ   89 (864)
T KOG4717|consen   61 TGHLFQEVRCMKLVQHPNIVRLYEVIDTQ   89 (864)
T ss_pred             hhHHHHHHHHHHHhcCcCeeeeeehhccc
Confidence            35577999999999999999998876443


No 479
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=86.08  E-value=0.6  Score=31.93  Aligned_cols=20  Identities=40%  Similarity=0.373  Sum_probs=17.1

Q ss_pred             CCCccCCCCCCCeEEecCCe
Q psy15406        112 HRVIHRDLKAGNVLLTMSGG  131 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~~  131 (134)
                      .+++|+|+.|.|++++.++.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~  194 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDEL  194 (296)
T ss_pred             CcCCccCcCcccEEEeCCce
Confidence            36999999999999987654


No 480
>KOG0032|consensus
Probab=85.99  E-value=0.058  Score=38.70  Aligned_cols=30  Identities=40%  Similarity=0.491  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHHHhhcC-chhHHHHHHHHHhc
Q psy15406          9 ELSDFMIEIDILSDCK-HENIVQLYEAFFTN   38 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~-~~~i~~~~~~~~~~   38 (134)
                      ..+...+|+++|+++. ||||+.++++|.+.
T Consensus        78 ~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~  108 (382)
T KOG0032|consen   78 DREDVRREVAILQQLSGHPNIVQLKDAFEDP  108 (382)
T ss_pred             cHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence            4578899999999998 99999776666443


No 481
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=85.98  E-value=0.46  Score=31.31  Aligned_cols=16  Identities=31%  Similarity=0.538  Sum_probs=14.8

Q ss_pred             CCccCCCCCCCeEEec
Q psy15406        113 RVIHRDLKAGNVLLTM  128 (134)
Q Consensus       113 ~i~h~dik~~nill~~  128 (134)
                      +++|+|+.+.||+++.
T Consensus       171 ~l~H~Dl~~~Nil~~~  186 (235)
T cd05157         171 VFCHNDLLSGNIIYNE  186 (235)
T ss_pred             EEEcCCCCcCcEEEeC
Confidence            5899999999999987


No 482
>PHA03111 Ser/Thr kinase; Provisional
Probab=85.88  E-value=2.3  Score=30.50  Aligned_cols=39  Identities=23%  Similarity=0.302  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHH----CCCccCCCCCCCeEEecCC
Q psy15406         92 EQQIRYICHYMCKALQFLHT----HRVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus        92 ~~~~~~~~~~i~~~l~~lh~----~~i~h~dik~~nill~~~~  130 (134)
                      .+-++.++-|++.-.-.+=.    ...+|.|+||+||++.++.
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~  320 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSD  320 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCC
Confidence            44555666666432212212    2368999999999996553


No 483
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=85.87  E-value=0.36  Score=32.46  Aligned_cols=28  Identities=39%  Similarity=0.621  Sum_probs=23.8

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHh
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAFFT   37 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~~~   37 (134)
                      ...+.+|++++++++|||++++++.+..
T Consensus        43 ~~~~~~ei~~l~~l~h~~i~~~~~~~~~   70 (284)
T cd07839          43 PSSALREICLLKELKHKNIVRLYDVLHS   70 (284)
T ss_pred             ccchhHHHHHHHhcCCCCeeeHHHHhcc
Confidence            3567899999999999999998888743


No 484
>PHA03212 serine/threonine kinase US3; Provisional
Probab=85.87  E-value=0.094  Score=37.58  Aligned_cols=26  Identities=31%  Similarity=0.387  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHH
Q psy15406         10 LSDFMIEIDILSDCKHENIVQLYEAF   35 (134)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~i~~~~~~~   35 (134)
                      ...+.+|++++++++||||+++++.+
T Consensus       127 ~~~~~~E~~il~~l~HpnIv~~~~~~  152 (391)
T PHA03212        127 RGGTATEAHILRAINHPSIIQLKGTF  152 (391)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCEeEEE
Confidence            45678999999999999999886543


No 485
>KOG2270|consensus
Probab=85.86  E-value=4.4  Score=29.69  Aligned_cols=88  Identities=13%  Similarity=0.163  Sum_probs=51.7

Q ss_pred             hHHHHHHHhhCCCCCccccceeeeeCCEEEEEEeccCCCCHH-HHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHHCCCcc
Q psy15406         39 GKLWIDILSDCKHENIVQLYEAFFTNGKLWMLIEYCDGGAVD-SIMLELEKPLTEQQIRYICHYMCKALQF-LHTHRVIH  116 (134)
Q Consensus        39 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~-lh~~~i~h  116 (134)
                      +..|+.-+.+++...|+..-.....  ...+||+++...... ..+.  ...++...+..+-.+++.-+.- .+.++++|
T Consensus       213 AEKE~RNLkRl~~aGIP~PePIlLk--~hVLVM~FlGrdgw~aPkLK--d~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVH  288 (520)
T KOG2270|consen  213 AEKEMRNLKRLNNAGIPCPEPILLK--NHVLVMEFLGRDGWAAPKLK--DASLSTSKARELYQQCVRIMRRLYQKCRLVH  288 (520)
T ss_pred             HHHHHHHHHHHHhcCCCCCCceeee--cceEeeeeccCCCCcCcccc--cccCChHHHHHHHHHHHHHHHHHHHHhceec
Confidence            3456667777776666555444442  246899998743322 2222  2344444444444444443333 35789999


Q ss_pred             CCCCCCCeEEecCC
Q psy15406        117 RDLKAGNVLLTMSG  130 (134)
Q Consensus       117 ~dik~~nill~~~~  130 (134)
                      .|+.-=|++..++.
T Consensus       289 ADLSEfN~LyhdG~  302 (520)
T KOG2270|consen  289 ADLSEFNLLYHDGK  302 (520)
T ss_pred             cchhhhhheEECCE
Confidence            99999999987654


No 486
>PRK05231 homoserine kinase; Provisional
Probab=85.53  E-value=0.68  Score=32.09  Aligned_cols=19  Identities=42%  Similarity=0.464  Sum_probs=16.2

Q ss_pred             CCCccCCCCCCCeEEecCC
Q psy15406        112 HRVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~  130 (134)
                      .+++|+|+.|+|++++.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~  205 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDR  205 (319)
T ss_pred             cccCCCCCCCCcEEEECCc
Confidence            3799999999999998553


No 487
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=85.34  E-value=5.9  Score=30.79  Aligned_cols=81  Identities=15%  Similarity=0.121  Sum_probs=58.3

Q ss_pred             CCCCccccceeeeeCCEEEEEEeccCC-CCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCCeEEec
Q psy15406         50 KHENIVQLYEAFFTNGKLWMLIEYCDG-GAVDSIMLELEKPLTEQQIRYICHYMCKALQFLHTHRVIHRDLKAGNVLLTM  128 (134)
Q Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dik~~nill~~  128 (134)
                      .+.+|+++|+.|..+..-.+.+|.... ..|.+....  ...+......|+.|++.=..-+...|+...=+.++|+-++.
T Consensus       178 ~~~~iP~v~~~~~~~~~~i~Lle~~~~~~~l~~~w~~--~~~~~l~~l~Wl~q~~~LW~~l~~~~~~~sll~~~nlrv~~  255 (645)
T PRK14559        178 FPTEIPKIHDAWQDGDLQVILLEDRSHWQPLLDLWQD--QTLPTLQILYWLNQMTQLWKALEPWGCCQSLLELENLRVDE  255 (645)
T ss_pred             ccccCcchheeecCCCCcEEEeCCCCCCchHHHHhhh--cCCcHHHHHHHHHHHHHHHHHHHhcCeehhccchhheeeCC
Confidence            345699999999987766777787643 223222221  23566778888999988888888889888888999999876


Q ss_pred             CCee
Q psy15406        129 SGGV  132 (134)
Q Consensus       129 ~~~~  132 (134)
                      ++.+
T Consensus       256 ~~~~  259 (645)
T PRK14559        256 DQTL  259 (645)
T ss_pred             Ccee
Confidence            5543


No 488
>PF05445 Pox_ser-thr_kin:  Poxvirus serine/threonine protein kinase;  InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=84.69  E-value=0.62  Score=33.35  Aligned_cols=37  Identities=24%  Similarity=0.462  Sum_probs=23.1

Q ss_pred             HHHHHHHHHHHHHHHHHHH--H----CCCccCCCCCCCeEEecCC
Q psy15406         92 EQQIRYICHYMCKALQFLH--T----HRVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus        92 ~~~~~~~~~~i~~~l~~lh--~----~~i~h~dik~~nill~~~~  130 (134)
                      .+-++.++-|++  +.|+-  .    ...+|.|+||+||++.++.
T Consensus       274 ~~YvkfifLQia--LLyikIYelp~c~nF~H~DLKPdNILiFds~  316 (434)
T PF05445_consen  274 VEYVKFIFLQIA--LLYIKIYELPCCTNFLHVDLKPDNILIFDSK  316 (434)
T ss_pred             HHHHHHHHHHHH--HHHeeeecCCCcceeeecccCcCcEEEecCC
Confidence            344455555553  44422  1    2368999999999996553


No 489
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=84.04  E-value=0.87  Score=31.48  Aligned_cols=20  Identities=40%  Similarity=0.426  Sum_probs=17.5

Q ss_pred             CCCccCCCCCCCeEEecCCe
Q psy15406        112 HRVIHRDLKAGNVLLTMSGG  131 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~~~  131 (134)
                      .+++|+|+.+.|++++.++.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~  206 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSV  206 (307)
T ss_pred             CccCCCCCCcCcEEEECCce
Confidence            57999999999999987763


No 490
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=83.85  E-value=0.63  Score=32.00  Aligned_cols=17  Identities=41%  Similarity=0.626  Sum_probs=15.0

Q ss_pred             CCccCCCCCCCeEEecC
Q psy15406        113 RVIHRDLKAGNVLLTMS  129 (134)
Q Consensus       113 ~i~h~dik~~nill~~~  129 (134)
                      +++|+|+.+.||+++.+
T Consensus       180 ~lcH~Dl~~~Nil~~~~  196 (302)
T cd05156         180 VFCHNDLQEGNILLLNP  196 (302)
T ss_pred             eEEecCCCcCeEEecCC
Confidence            47999999999999863


No 491
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=83.52  E-value=0.83  Score=30.25  Aligned_cols=18  Identities=33%  Similarity=0.453  Sum_probs=15.6

Q ss_pred             CCccCCCCCCCeEEecCC
Q psy15406        113 RVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus       113 ~i~h~dik~~nill~~~~  130 (134)
                      +++|+|+.++|++++.++
T Consensus       165 ~l~HGD~~~~Nvlv~~~~  182 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGR  182 (235)
T ss_pred             eEEeCCCCCCcEEEECCC
Confidence            489999999999998654


No 492
>PRK10271 thiK thiamine kinase; Provisional
Probab=83.09  E-value=0.97  Score=29.27  Aligned_cols=17  Identities=41%  Similarity=0.716  Sum_probs=15.2

Q ss_pred             CccCCCCCCCeEEecCC
Q psy15406        114 VIHRDLKAGNVLLTMSG  130 (134)
Q Consensus       114 i~h~dik~~nill~~~~  130 (134)
                      .+|+|+.|+|+++.++|
T Consensus        79 p~H~D~~~~N~~~~~~~   95 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG   95 (188)
T ss_pred             eecCCCCCccEEEECCC
Confidence            58999999999988776


No 493
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=82.31  E-value=0.99  Score=30.28  Aligned_cols=18  Identities=33%  Similarity=0.488  Sum_probs=15.9

Q ss_pred             CCccCCCCCCCeEEecCC
Q psy15406        113 RVIHRDLKAGNVLLTMSG  130 (134)
Q Consensus       113 ~i~h~dik~~nill~~~~  130 (134)
                      .++|+|+.|+|++++.++
T Consensus       147 ~l~H~Dl~~~Nil~~~~~  164 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG  164 (256)
T ss_pred             eeecCCCCcCcEEEeCCC
Confidence            479999999999998765


No 494
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=82.30  E-value=3.7  Score=28.22  Aligned_cols=18  Identities=28%  Similarity=0.366  Sum_probs=15.6

Q ss_pred             CCCccCCCCCCCeEEecC
Q psy15406        112 HRVIHRDLKAGNVLLTMS  129 (134)
Q Consensus       112 ~~i~h~dik~~nill~~~  129 (134)
                      .+++|+|+.+.|++++.+
T Consensus       187 ~~liHgD~~~~Nil~~~~  204 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKDN  204 (313)
T ss_pred             CceEcCCCCcccEEEeCC
Confidence            468999999999999763


No 495
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=81.42  E-value=0.74  Score=29.83  Aligned_cols=20  Identities=40%  Similarity=0.758  Sum_probs=14.8

Q ss_pred             CCccCCCCCCCeEEe-cCCee
Q psy15406        113 RVIHRDLKAGNVLLT-MSGGV  132 (134)
Q Consensus       113 ~i~h~dik~~nill~-~~~~~  132 (134)
                      +++|+|+.|+|++++ .++.+
T Consensus       167 ~~~HgD~~~~Nil~~~~~~~i  187 (239)
T PF01636_consen  167 VLIHGDLHPGNILVDPSDGRI  187 (239)
T ss_dssp             EEE-SS-SGGGEEEESSTTEE
T ss_pred             EEEEeccccccceeeecccee
Confidence            489999999999999 55654


No 496
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=81.31  E-value=0.14  Score=34.70  Aligned_cols=27  Identities=30%  Similarity=0.439  Sum_probs=22.0

Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHH
Q psy15406          9 ELSDFMIEIDILSDCKHENIVQLYEAF   35 (134)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~i~~~~~~~   35 (134)
                      ....+.+|++++++++||||+++++.+
T Consensus        46 ~~~~~~~E~~~l~~l~h~niv~~~~~~   72 (288)
T cd07871          46 APCTAIREVSLLKNLKHANIVTLHDII   72 (288)
T ss_pred             cchhHHHHHHHHHhCCCCCEeeEEEEE
Confidence            345678999999999999999876543


No 497
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=80.64  E-value=1.4  Score=30.18  Aligned_cols=19  Identities=26%  Similarity=0.583  Sum_probs=16.0

Q ss_pred             CCccCCCCCCCeEEecCCe
Q psy15406        113 RVIHRDLKAGNVLLTMSGG  131 (134)
Q Consensus       113 ~i~h~dik~~nill~~~~~  131 (134)
                      .++|+|+++.|++++.+++
T Consensus       186 ~lvHGD~~~~Nilv~~~~~  204 (276)
T cd05152         186 VLVHGDLHPGHILIDEDAR  204 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCC
Confidence            4799999999999986444


No 498
>KOG2137|consensus
Probab=79.18  E-value=1.1  Score=34.60  Aligned_cols=35  Identities=26%  Similarity=0.565  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHHC-CCccCCCCCCCeEEecCCeeeC
Q psy15406        100 HYMCKALQFLHTH-RVIHRDLKAGNVLLTMSGGVKL  134 (134)
Q Consensus       100 ~~i~~~l~~lh~~-~i~h~dik~~nill~~~~~~~i  134 (134)
                      .++..|+.|+|.. +++|+.+.|++|.++.+|.-||
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl  141 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKL  141 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCcceee
Confidence            3455789999954 7999999999999998875543


No 499
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=78.61  E-value=1  Score=31.23  Aligned_cols=19  Identities=21%  Similarity=0.389  Sum_probs=16.6

Q ss_pred             CCccCCCCCCCeEEecCCe
Q psy15406        113 RVIHRDLKAGNVLLTMSGG  131 (134)
Q Consensus       113 ~i~h~dik~~nill~~~~~  131 (134)
                      +++|+|+.++|++++.++.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~  215 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRG  215 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCC
Confidence            6999999999999987654


No 500
>KOG1989|consensus
Probab=78.22  E-value=1.6  Score=34.16  Aligned_cols=39  Identities=23%  Similarity=0.159  Sum_probs=0.0

Q ss_pred             HhchHHHHHHHhhCC-CCCccccce-eeeeCCEEEEEEecc
Q psy15406         36 FTNGKLWIDILSDCK-HENIVQLYE-AFFTNGKLWMLIEYC   74 (134)
Q Consensus        36 ~~~~~~~~~~~~~~~-h~~i~~~~~-~~~~~~~~~lv~e~~   74 (134)
                      +.-..+||++|+.|+ |+|||.+++ .......-.-+.|++
T Consensus        78 L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl  118 (738)
T KOG1989|consen   78 LNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL  118 (738)
T ss_pred             HHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE


Done!