Query psy15407
Match_columns 604
No_of_seqs 862 out of 3764
Neff 9.4
Searched_HMMs 46136
Date Fri Aug 16 20:13:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15407.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15407hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4237|consensus 100.0 1E-41 2.2E-46 328.3 6.5 294 47-351 3-408 (498)
2 KOG4194|consensus 100.0 1.3E-30 2.7E-35 262.6 2.1 253 97-350 152-502 (873)
3 KOG4237|consensus 99.9 1.8E-28 3.8E-33 237.1 -1.4 278 2-298 190-498 (498)
4 KOG4194|consensus 99.9 9E-23 1.9E-27 206.3 4.3 217 86-309 44-289 (873)
5 KOG4289|consensus 99.8 8.5E-21 1.8E-25 205.0 14.8 105 359-464 1180-1308(2531)
6 KOG0444|consensus 99.8 3.5E-20 7.5E-25 188.8 -3.5 200 96-300 105-328 (1255)
7 KOG4289|consensus 99.7 1.9E-17 4.1E-22 179.6 12.8 105 398-504 1180-1308(2531)
8 KOG1219|consensus 99.7 3.8E-17 8.3E-22 183.1 9.4 113 359-472 3865-3978(4289)
9 KOG0617|consensus 99.7 2.3E-18 5.1E-23 148.9 -3.9 172 97-301 36-212 (264)
10 PRK15387 E3 ubiquitin-protein 99.6 1.3E-15 2.7E-20 167.6 11.0 57 96-157 203-259 (788)
11 PLN00113 leucine-rich repeat r 99.6 1.1E-15 2.4E-20 179.5 11.4 203 97-301 121-345 (968)
12 PLN00113 leucine-rich repeat r 99.6 1.4E-15 3E-20 178.7 12.0 205 97-305 359-588 (968)
13 KOG1219|consensus 99.6 9.3E-16 2E-20 172.3 9.7 117 393-511 3860-3977(4289)
14 KOG0444|consensus 99.6 3.7E-17 7.9E-22 167.0 -2.2 201 97-303 81-306 (1255)
15 KOG1217|consensus 99.6 1.9E-14 4.1E-19 155.9 18.5 213 361-599 129-355 (487)
16 KOG1217|consensus 99.6 3.7E-14 8.1E-19 153.6 19.4 223 342-594 150-389 (487)
17 PRK15370 E3 ubiquitin-protein 99.6 4.2E-15 9.1E-20 164.4 10.1 189 96-301 180-380 (754)
18 KOG0617|consensus 99.6 6.6E-17 1.4E-21 140.0 -4.7 161 107-301 24-186 (264)
19 PRK15370 E3 ubiquitin-protein 99.5 9.3E-15 2E-19 161.8 8.2 77 216-301 325-401 (754)
20 KOG0472|consensus 99.5 6.5E-16 1.4E-20 150.6 -3.8 171 97-301 365-541 (565)
21 PF14580 LRR_9: Leucine-rich r 99.5 5.4E-15 1.2E-19 134.1 1.5 83 217-301 43-126 (175)
22 KOG0472|consensus 99.5 6E-16 1.3E-20 150.9 -6.7 193 98-301 95-310 (565)
23 KOG1214|consensus 99.5 8.6E-13 1.9E-17 137.9 14.9 188 405-601 702-919 (1289)
24 KOG0618|consensus 99.4 2.4E-15 5.3E-20 160.8 -7.9 82 217-301 384-465 (1081)
25 KOG0618|consensus 99.4 3.5E-15 7.7E-20 159.6 -7.0 198 97-300 244-488 (1081)
26 KOG1214|consensus 99.4 9.2E-12 2E-16 130.4 16.9 176 365-546 701-909 (1289)
27 PF14580 LRR_9: Leucine-rich r 99.4 1.5E-13 3.3E-18 124.7 3.1 140 99-295 2-147 (175)
28 PRK15387 E3 ubiquitin-protein 99.3 6.9E-13 1.5E-17 146.2 5.8 173 99-302 287-459 (788)
29 KOG1259|consensus 99.3 1.5E-13 3.2E-18 129.5 -1.2 126 118-302 287-413 (490)
30 KOG0532|consensus 99.3 3.1E-14 6.7E-19 144.9 -6.7 168 97-301 78-247 (722)
31 KOG1225|consensus 99.3 2.4E-11 5.2E-16 126.3 12.2 131 381-547 235-365 (525)
32 KOG1225|consensus 99.2 4.3E-11 9.3E-16 124.5 11.3 130 420-595 235-365 (525)
33 PF13855 LRR_8: Leucine rich r 99.2 1.7E-11 3.6E-16 91.7 5.1 60 217-276 2-61 (61)
34 PF13855 LRR_8: Leucine rich r 99.2 1.4E-11 3.1E-16 92.0 4.5 61 240-300 1-61 (61)
35 PLN03210 Resistant to P. syrin 99.2 1.8E-10 3.9E-15 136.4 13.3 195 97-298 592-835 (1153)
36 COG4886 Leucine-rich repeat (L 99.1 4.4E-11 9.5E-16 126.0 5.1 81 217-301 210-290 (394)
37 KOG1259|consensus 99.1 9.6E-12 2.1E-16 117.4 -0.8 128 97-282 287-417 (490)
38 KOG3207|consensus 99.0 4.6E-11 1E-15 118.6 -0.8 201 98-301 125-339 (505)
39 PLN03210 Resistant to P. syrin 99.0 3.8E-09 8.3E-14 125.2 14.0 195 96-300 613-858 (1153)
40 KOG3207|consensus 98.9 1.2E-10 2.7E-15 115.6 -1.5 185 115-301 121-314 (505)
41 KOG1859|consensus 98.9 2.4E-11 5.1E-16 127.2 -7.6 128 118-304 167-295 (1096)
42 PLN03150 hypothetical protein; 98.9 1.7E-09 3.6E-14 119.6 5.5 87 217-303 443-530 (623)
43 KOG0994|consensus 98.9 1.2E-08 2.6E-13 110.8 11.5 209 380-598 885-1147(1758)
44 TIGR00864 PCC polycystin catio 98.9 7.1E-10 1.5E-14 132.5 2.5 80 270-349 1-83 (2740)
45 KOG0532|consensus 98.9 3.9E-11 8.6E-16 122.6 -6.8 179 97-312 53-239 (722)
46 KOG4260|consensus 98.9 2.9E-09 6.3E-14 98.3 5.9 79 460-544 221-304 (350)
47 cd00116 LRR_RI Leucine-rich re 98.9 2E-10 4.3E-15 117.4 -2.3 85 217-301 194-291 (319)
48 cd00116 LRR_RI Leucine-rich re 98.8 1.2E-10 2.6E-15 118.9 -4.7 81 97-177 26-121 (319)
49 COG4886 Leucine-rich repeat (L 98.8 2.4E-09 5.1E-14 112.8 4.0 176 96-284 118-297 (394)
50 KOG1226|consensus 98.8 5.1E-08 1.1E-12 103.4 13.5 121 420-552 479-623 (783)
51 KOG4260|consensus 98.8 7.1E-09 1.5E-13 95.8 5.6 167 381-592 129-304 (350)
52 KOG0531|consensus 98.7 1.1E-09 2.4E-14 115.8 -1.4 145 99-280 77-224 (414)
53 KOG0531|consensus 98.7 2.7E-09 5.9E-14 112.8 0.6 80 97-181 98-179 (414)
54 KOG0994|consensus 98.7 1.3E-07 2.9E-12 102.9 12.9 214 380-600 830-1101(1758)
55 PLN03150 hypothetical protein; 98.7 1.8E-08 4E-13 111.4 5.6 126 94-277 402-528 (623)
56 KOG1644|consensus 98.7 2.9E-08 6.3E-13 89.3 5.5 81 217-297 65-149 (233)
57 KOG1226|consensus 98.6 3.6E-07 7.8E-12 97.1 12.6 134 442-600 467-623 (783)
58 KOG1644|consensus 98.6 9.1E-08 2E-12 86.1 5.6 124 96-274 21-150 (233)
59 smart00082 LRRCT Leucine rich 98.5 3.8E-08 8.2E-13 70.4 1.5 50 10-62 1-50 (51)
60 KOG1859|consensus 98.5 1.4E-09 3.1E-14 114.2 -8.4 126 97-280 167-295 (1096)
61 PF13306 LRR_5: Leucine rich r 98.3 2.5E-06 5.3E-11 74.4 8.5 115 117-290 14-128 (129)
62 KOG4579|consensus 98.3 2.2E-08 4.8E-13 84.3 -5.1 86 217-305 78-163 (177)
63 KOG4579|consensus 98.3 3.9E-08 8.5E-13 82.8 -3.6 65 98-164 31-100 (177)
64 KOG2982|consensus 98.3 9.1E-08 2E-12 90.9 -1.9 180 115-301 71-262 (418)
65 PF12799 LRR_4: Leucine Rich r 98.2 7.1E-07 1.5E-11 61.1 2.8 40 240-280 1-40 (44)
66 PRK15386 type III secretion pr 98.2 3.8E-06 8.2E-11 85.8 7.7 57 96-157 54-112 (426)
67 PF13306 LRR_5: Leucine rich r 98.2 4.6E-06 1E-10 72.6 7.4 111 129-297 2-112 (129)
68 PF12799 LRR_4: Leucine Rich r 98.2 1.1E-06 2.5E-11 60.1 2.2 40 116-157 2-41 (44)
69 PF06247 Plasmod_Pvs28: Plasmo 98.2 7.1E-07 1.5E-11 78.8 1.4 138 443-594 7-162 (197)
70 KOG1836|consensus 98.1 2.2E-05 4.7E-10 93.2 13.5 215 381-601 696-977 (1705)
71 smart00082 LRRCT Leucine rich 98.1 5.1E-07 1.1E-11 64.5 -0.3 49 298-347 1-51 (51)
72 KOG1836|consensus 98.1 6.4E-05 1.4E-09 89.4 16.5 206 384-600 761-1024(1705)
73 PF00008 EGF: EGF-like domain 98.1 2.8E-06 6.1E-11 53.6 2.5 31 517-547 1-32 (32)
74 smart00179 EGF_CA Calcium-bind 97.9 1.4E-05 3E-10 53.3 4.2 36 514-549 2-39 (39)
75 KOG4658|consensus 97.9 4.2E-06 9E-11 95.1 2.5 140 104-275 511-653 (889)
76 KOG1909|consensus 97.9 3.6E-07 7.8E-12 89.0 -6.0 85 216-300 213-310 (382)
77 PF01462 LRRNT: Leucine rich r 97.8 1.3E-05 2.9E-10 48.7 2.3 28 87-114 1-28 (28)
78 KOG4658|consensus 97.8 8.6E-06 1.9E-10 92.6 2.3 146 96-272 525-676 (889)
79 smart00013 LRRNT Leucine rich 97.8 3.1E-05 6.8E-10 49.2 3.5 32 87-118 1-32 (33)
80 PF07645 EGF_CA: Calcium-bindi 97.8 2.3E-05 5E-10 53.1 3.0 32 513-544 1-34 (42)
81 PF07645 EGF_CA: Calcium-bindi 97.7 2.3E-05 5E-10 53.1 2.8 34 473-506 1-34 (42)
82 PF00008 EGF: EGF-like domain 97.7 1.8E-05 3.8E-10 50.0 2.0 26 442-467 4-30 (32)
83 cd00054 EGF_CA Calcium-binding 97.6 8E-05 1.7E-09 49.1 4.1 36 514-549 2-38 (38)
84 smart00179 EGF_CA Calcium-bind 97.6 8.8E-05 1.9E-09 49.3 4.3 35 436-470 2-38 (39)
85 KOG2739|consensus 97.5 2.7E-05 5.8E-10 73.6 1.0 56 239-294 90-149 (260)
86 KOG2982|consensus 97.5 3.9E-05 8.4E-10 73.4 1.1 196 97-295 74-286 (418)
87 PRK15386 type III secretion pr 97.5 0.00017 3.8E-09 73.9 5.9 52 115-174 52-104 (426)
88 KOG1909|consensus 97.4 1.3E-05 2.9E-10 78.3 -2.6 67 235-301 208-283 (382)
89 TIGR00864 PCC polycystin catio 97.4 0.00012 2.5E-09 89.3 3.5 58 8-66 27-84 (2740)
90 PF06247 Plasmod_Pvs28: Plasmo 97.3 0.00014 3E-09 64.6 2.6 124 416-546 17-162 (197)
91 cd00054 EGF_CA Calcium-binding 97.2 0.00049 1.1E-08 45.2 4.2 34 437-470 3-37 (38)
92 cd00053 EGF Epidermal growth f 97.2 0.00058 1.3E-08 44.1 4.0 30 519-548 5-35 (36)
93 smart00181 EGF Epidermal growt 97.1 0.00067 1.5E-08 43.8 3.9 28 520-548 6-34 (35)
94 KOG2123|consensus 97.1 1.5E-05 3.3E-10 75.4 -5.9 58 218-277 43-101 (388)
95 PF12661 hEGF: Human growth fa 97.0 0.00028 6.2E-09 34.3 0.8 13 584-596 1-13 (13)
96 smart00181 EGF Epidermal growt 97.0 0.0011 2.4E-08 42.8 3.7 29 567-597 6-35 (35)
97 PF12947 EGF_3: EGF domain; I 96.9 0.00057 1.2E-08 44.2 1.8 26 521-546 7-32 (36)
98 PF12947 EGF_3: EGF domain; I 96.8 0.00074 1.6E-08 43.6 2.0 32 477-508 1-32 (36)
99 KOG2739|consensus 96.8 0.00067 1.4E-08 64.3 2.4 82 217-300 44-128 (260)
100 KOG3512|consensus 96.8 0.0093 2E-07 60.4 10.0 103 497-601 371-482 (592)
101 KOG2123|consensus 96.8 6.9E-05 1.5E-09 71.1 -4.6 80 217-300 20-100 (388)
102 cd00053 EGF Epidermal growth f 96.7 0.0029 6.2E-08 40.8 4.1 27 442-468 6-32 (36)
103 PF07974 EGF_2: EGF-like domai 96.5 0.0036 7.7E-08 39.2 3.5 26 521-548 7-32 (32)
104 PF00560 LRR_1: Leucine Rich R 96.5 0.0015 3.2E-08 37.2 1.4 21 141-162 1-21 (22)
105 KOG3665|consensus 96.4 0.00084 1.8E-08 74.7 -0.2 82 217-300 174-262 (699)
106 KOG1218|consensus 96.3 0.39 8.5E-06 48.7 19.2 191 385-600 96-299 (316)
107 smart00369 LRR_TYP Leucine-ric 96.2 0.003 6.5E-08 37.6 1.5 23 139-161 1-23 (26)
108 smart00370 LRR Leucine-rich re 96.2 0.003 6.5E-08 37.6 1.5 23 139-161 1-23 (26)
109 KOG1218|consensus 96.2 0.15 3.3E-06 51.7 15.1 153 379-543 48-207 (316)
110 PF07974 EGF_2: EGF-like domai 96.2 0.0075 1.6E-07 37.8 3.4 26 483-510 7-32 (32)
111 PF00560 LRR_1: Leucine Rich R 96.1 0.0036 7.8E-08 35.6 1.8 14 242-255 2-15 (22)
112 KOG2120|consensus 96.1 5.1E-05 1.1E-09 72.7 -9.6 58 238-297 311-372 (419)
113 PF12661 hEGF: Human growth fa 96.1 0.0034 7.4E-08 30.5 1.3 12 537-548 2-13 (13)
114 smart00369 LRR_TYP Leucine-ric 96.0 0.0043 9.3E-08 36.9 1.7 23 263-285 1-23 (26)
115 smart00370 LRR Leucine-rich re 96.0 0.0043 9.3E-08 36.9 1.7 23 263-285 1-23 (26)
116 KOG3665|consensus 96.0 0.0029 6.3E-08 70.5 1.6 58 114-173 147-204 (699)
117 COG5238 RNA1 Ran GTPase-activa 95.5 0.00084 1.8E-08 63.7 -4.2 187 87-301 90-316 (388)
118 PF12662 cEGF: Complement Clr- 95.5 0.013 2.7E-07 33.9 2.2 10 497-506 2-11 (24)
119 KOG0473|consensus 95.4 0.0004 8.7E-09 64.3 -6.5 82 217-301 43-124 (326)
120 PF12662 cEGF: Complement Clr- 95.2 0.017 3.7E-07 33.4 2.2 10 419-428 2-11 (24)
121 smart00051 DSL delta serrate l 95.2 0.028 6.2E-07 41.5 3.9 46 534-596 16-63 (63)
122 COG5238 RNA1 Ran GTPase-activa 95.2 0.0022 4.8E-08 60.9 -2.5 80 217-296 158-250 (388)
123 PHA02887 EGF-like protein; Pro 95.2 0.019 4.2E-07 46.7 3.1 33 567-599 92-124 (126)
124 PF13504 LRR_7: Leucine rich r 95.1 0.012 2.6E-07 31.0 1.3 15 265-279 2-16 (17)
125 KOG3512|consensus 95.1 0.045 9.7E-07 55.7 6.0 131 448-598 285-429 (592)
126 PHA03099 epidermal growth fact 94.9 0.023 5E-07 47.1 3.0 41 560-600 41-84 (139)
127 smart00051 DSL delta serrate l 94.9 0.032 6.9E-07 41.3 3.4 46 497-548 17-63 (63)
128 PF13504 LRR_7: Leucine rich r 94.7 0.017 3.7E-07 30.5 1.1 17 140-156 1-17 (17)
129 PF01463 LRRCT: Leucine rich r 94.6 0.012 2.5E-07 34.7 0.4 24 39-63 2-25 (25)
130 PF14670 FXa_inhibition: Coagu 94.2 0.04 8.7E-07 35.6 2.2 18 527-544 11-28 (36)
131 PF01463 LRRCT: Leucine rich r 93.6 0.023 4.9E-07 33.4 0.3 24 323-347 2-25 (25)
132 smart00365 LRR_SD22 Leucine-ri 93.3 0.069 1.5E-06 31.6 1.9 19 139-157 1-19 (26)
133 KOG0473|consensus 93.3 0.0025 5.3E-08 59.3 -6.4 42 114-157 41-82 (326)
134 PF14670 FXa_inhibition: Coagu 92.7 0.078 1.7E-06 34.2 1.7 18 489-506 11-28 (36)
135 PF12946 EGF_MSP1_1: MSP1 EGF 90.6 0.14 3E-06 32.9 1.2 28 517-544 2-30 (37)
136 PF01414 DSL: Delta serrate li 90.4 0.078 1.7E-06 39.2 -0.1 46 534-596 16-63 (63)
137 smart00365 LRR_SD22 Leucine-ri 90.3 0.23 5.1E-06 29.4 1.9 16 240-255 2-17 (26)
138 PF12946 EGF_MSP1_1: MSP1 EGF 89.4 0.2 4.3E-06 32.2 1.2 26 403-428 5-30 (37)
139 KOG3763|consensus 88.5 0.18 3.9E-06 53.1 0.9 61 238-301 216-283 (585)
140 PHA03099 epidermal growth fact 87.8 0.51 1.1E-05 39.4 2.9 30 521-551 52-83 (139)
141 PF01414 DSL: Delta serrate li 87.3 0.26 5.7E-06 36.4 0.9 47 496-548 16-63 (63)
142 KOG2120|consensus 87.1 0.024 5.2E-07 54.9 -5.9 153 117-274 187-373 (419)
143 PHA02887 EGF-like protein; Pro 87.0 0.55 1.2E-05 38.5 2.6 29 521-550 93-123 (126)
144 smart00364 LRR_BAC Leucine-ric 87.0 0.39 8.4E-06 28.3 1.3 18 264-281 2-19 (26)
145 KOG3516|consensus 84.1 1.1 2.4E-05 51.3 4.2 38 359-397 546-584 (1306)
146 PF00053 Laminin_EGF: Laminin 84.1 0.84 1.8E-05 31.8 2.2 24 527-552 12-35 (49)
147 smart00364 LRR_BAC Leucine-ric 84.0 0.64 1.4E-05 27.4 1.2 18 140-157 2-19 (26)
148 cd00055 EGF_Lam Laminin-type e 83.6 1.9 4.1E-05 30.2 3.8 23 528-552 14-36 (50)
149 PF13516 LRR_6: Leucine Rich r 83.1 0.62 1.4E-05 26.8 1.0 17 139-155 1-17 (24)
150 KOG3516|consensus 82.8 1 2.2E-05 51.7 3.2 41 560-602 544-586 (1306)
151 KOG4308|consensus 82.7 0.0082 1.8E-07 64.0 -12.6 86 216-301 204-303 (478)
152 cd01475 vWA_Matrilin VWA_Matri 81.0 1.7 3.7E-05 41.6 3.8 18 527-544 200-217 (224)
153 KOG3864|consensus 80.9 0.22 4.9E-06 45.7 -2.2 80 217-300 102-188 (221)
154 cd01475 vWA_Matrilin VWA_Matri 80.9 1.8 3.8E-05 41.5 3.8 20 448-467 199-218 (224)
155 PF01683 EB: EB module; Inter 77.7 3.9 8.4E-05 28.8 3.8 20 521-544 27-46 (52)
156 PF00053 Laminin_EGF: Laminin 77.0 1.5 3.2E-05 30.5 1.5 23 573-599 12-34 (49)
157 KOG3763|consensus 76.6 0.98 2.1E-05 47.8 0.6 61 217-278 219-284 (585)
158 cd00055 EGF_Lam Laminin-type e 74.9 3.4 7.5E-05 28.9 2.9 23 574-600 14-36 (50)
159 smart00180 EGF_Lam Laminin-typ 73.8 5.2 0.00011 27.4 3.5 16 536-551 19-34 (46)
160 KOG3514|consensus 73.5 2.3 4.9E-05 48.2 2.4 36 516-551 625-661 (1591)
161 smart00368 LRR_RI Leucine rich 73.1 2.5 5.4E-05 25.4 1.6 15 140-154 2-16 (28)
162 smart00180 EGF_Lam Laminin-typ 71.3 4.9 0.00011 27.5 2.9 16 584-599 19-34 (46)
163 KOG3864|consensus 68.3 0.49 1.1E-05 43.6 -3.4 31 217-247 152-183 (221)
164 PF04863 EGF_alliinase: Alliin 62.0 4.3 9.4E-05 28.6 1.1 34 364-397 17-53 (56)
165 KOG3509|consensus 61.6 13 0.00027 42.9 5.2 73 514-596 406-478 (964)
166 KOG3514|consensus 59.7 5.6 0.00012 45.3 2.0 35 438-472 625-660 (1591)
167 KOG1388|consensus 55.0 10 0.00022 35.2 2.5 58 528-601 69-130 (217)
168 PF04863 EGF_alliinase: Alliin 54.8 5.6 0.00012 28.0 0.7 34 404-437 18-54 (56)
169 PF00954 S_locus_glycop: S-loc 51.9 15 0.00032 30.6 3.0 24 442-466 84-107 (110)
170 KOG0196|consensus 50.0 23 0.0005 39.7 4.7 12 581-592 306-317 (996)
171 PF12955 DUF3844: Domain of un 48.3 8.8 0.00019 31.3 1.0 30 476-505 7-41 (103)
172 KOG3509|consensus 48.0 43 0.00094 38.8 6.6 17 584-600 719-735 (964)
173 PF12955 DUF3844: Domain of un 47.0 19 0.0004 29.5 2.6 23 520-542 13-40 (103)
174 PF00954 S_locus_glycop: S-loc 40.2 31 0.00067 28.7 3.1 29 515-544 78-107 (110)
175 PF09064 Tme5_EGF_like: Thromb 32.9 33 0.00072 21.7 1.6 18 527-545 11-28 (34)
176 KOG3607|consensus 26.9 59 0.0013 36.8 3.4 25 571-600 635-659 (716)
177 KOG1388|consensus 21.7 44 0.00096 31.2 1.0 57 490-551 69-128 (217)
178 PF05725 FNIP: FNIP Repeat; I 20.0 1.4E+02 0.003 20.0 3.0 35 111-148 8-42 (44)
No 1
>KOG4237|consensus
Probab=100.00 E-value=1e-41 Score=328.32 Aligned_cols=294 Identities=27% Similarity=0.484 Sum_probs=236.4
Q ss_pred ccCcccccCCCCceeecCCCCCcCccccccccCCcccC-CCCCCCCCeeCC---CeEEcCCCCCCcCCCCCCccCcEEec
Q psy15407 47 KNGICFQPQGSNDYLCKCAPGYSGVEEFRTRYAGDCLI-DAACPSGCSCDG---TRVDCSQRGLKEIPKDIPLYTTELIL 122 (604)
Q Consensus 47 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~c~~-~~~CP~~C~C~~---~~l~cs~~~L~~iP~~l~~~~~~L~L 122 (604)
+.|..+..++.++|.|+ |...+. ....|.. ...||..|+|+. .+|+|++.+|++||.++|..+++|+|
T Consensus 3 lrG~~v~~l~~s~~~cs------g~~s~~--~~~~C~~~~~~CP~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirL 74 (498)
T KOG4237|consen 3 LRGLNVADLQKSEFVCS------GLQSAW--AVPTCAHSASACPAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRL 74 (498)
T ss_pred cccccccccccceeeec------Cchhhh--hhhhhhhccccCCCCcccCCCCCceEEccCCCcccCcccCCCcceEEEe
Confidence 56778889999999999 554331 2456765 678999999987 89999999999999999999999999
Q ss_pred CCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCC-CCCCcc----------------------
Q psy15407 123 NDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNY-CPPKCT---------------------- 179 (604)
Q Consensus 123 ~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~-~~~~~~---------------------- 179 (604)
..|+|+.||+ ++|+.|++|+.||||+|+|+.|.+++|.||.+|..|.+-. |.+..+
T Consensus 75 dqN~I~~iP~-~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~ 153 (498)
T KOG4237|consen 75 DQNQISSIPP-GAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHIN 153 (498)
T ss_pred ccCCcccCCh-hhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhc
Confidence 9999999987 5699999999999999999999999999998777665544 321110
Q ss_pred ----------ccccEEEccC---------------Ccccccccccccee-------------------------------
Q psy15407 180 ----------CTVRVLFYDG---------------RAGECYIAVELFSS------------------------------- 203 (604)
Q Consensus 180 ----------~~l~~l~~~~---------------~~~~~~~~~~~~~~------------------------------- 203 (604)
..+..+.+.. ....+.+..+-+..
T Consensus 154 Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~ 233 (498)
T KOG4237|consen 154 CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYY 233 (498)
T ss_pred chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHH
Confidence 1111111100 00011111111000
Q ss_pred ----eeeecc-------c------------------cCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCccee
Q psy15407 204 ----RIRVSY-------Y------------------VGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQC 254 (604)
Q Consensus 204 ----~~~~~~-------~------------------~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~ 254 (604)
...... + ...+ .+|++|+|++|+|+.|.+.+|.++..|++|+|..|+|..
T Consensus 234 ~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L-~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~ 312 (498)
T KOG4237|consen 234 KRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKL-PNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEF 312 (498)
T ss_pred HHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhc-ccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHH
Confidence 000000 0 0112 378999999999999999999999999999999999999
Q ss_pred eeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCcccccCCCccccccccccccCCccccCCCCccccc
Q psy15407 255 IDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDCGLAWLSEWVKRDYVEPGIARCTEPASMRDK 334 (604)
Q Consensus 255 i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~CdC~l~~l~~~~~~~~~~~~~~~C~~P~~l~g~ 334 (604)
+...+|.+|..|+.|+|.+|+|+.+.+.+|..+.+|..|+|-.|||.|||++.||++|+++.. ..++++|+.|..+++.
T Consensus 313 v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~-~~~~~~Cq~p~~~~~~ 391 (498)
T KOG4237|consen 313 VSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKS-VVGNPRCQSPGFVRQI 391 (498)
T ss_pred HHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCC-CCCCCCCCCCchhccc
Confidence 999999999999999999999999999999999999999999999999999999999999887 7788999999999999
Q ss_pred ccccCCCCceeecCccc
Q psy15407 335 LLLTAPASSFQCKEKVS 351 (604)
Q Consensus 335 ~l~~~~~~~~~C~~~~~ 351 (604)
.+.+++.++|.|..+.+
T Consensus 392 ~~~dv~~~~~~c~~~ee 408 (498)
T KOG4237|consen 392 PISDVAFGDFRCGGPEE 408 (498)
T ss_pred cchhccccccccCCccc
Confidence 99999999999985433
No 2
>KOG4194|consensus
Probab=99.96 E-value=1.3e-30 Score=262.62 Aligned_cols=253 Identities=28% Similarity=0.474 Sum_probs=173.8
Q ss_pred CeEEcCCCCCCcCCCC-CCc--cCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCC
Q psy15407 97 TRVDCSQRGLKEIPKD-IPL--YTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNY 173 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~-l~~--~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~ 173 (604)
+.||+|.|.|++||.. +|. ++++|+|++|+|+.|.. +.|..|.+|..|.|++|+|+.++..+|..|++|+.|+|..
T Consensus 152 rslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~-~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnr 230 (873)
T KOG4194|consen 152 RSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLET-GHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNR 230 (873)
T ss_pred hhhhhhhchhhcccCCCCCCCCCceEEeecccccccccc-ccccccchheeeecccCcccccCHHHhhhcchhhhhhccc
Confidence 6799999999999875 443 56899999999999976 4588888888888888888888888888888888888887
Q ss_pred CCCC--------ccccccEEEccCC---------------cccccccccccee------------------eee---ecc
Q psy15407 174 CPPK--------CTCTVRVLFYDGR---------------AGECYIAVELFSS------------------RIR---VSY 209 (604)
Q Consensus 174 ~~~~--------~~~~l~~l~~~~~---------------~~~~~~~~~~~~~------------------~~~---~~~ 209 (604)
|.+. -+.+++.+.+..| ..++.+..|.+.. .+. +..
T Consensus 231 N~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~ 310 (873)
T KOG4194|consen 231 NRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHI 310 (873)
T ss_pred cceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeec
Confidence 7422 2233333333211 1111111111110 000 000
Q ss_pred ccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeecc---------------------------ccCC
Q psy15407 210 YVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRD---------------------------ALAG 262 (604)
Q Consensus 210 ~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~---------------------------~f~~ 262 (604)
..-.+-.+|++|+||+|+|+.+++..|..|..|++|+|++|+|+.|... +|.+
T Consensus 311 d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g 390 (873)
T KOG4194|consen 311 DSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG 390 (873)
T ss_pred chhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc
Confidence 0011224667777777777766666555555444444444444433322 3666
Q ss_pred CCcccEEEccCCccccCCcccccCcccceeeeccCCCc-----------------------ccccCCCcccccccccccc
Q psy15407 263 LKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPL-----------------------YCDCGLAWLSEWVKRDYVE 319 (604)
Q Consensus 263 l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl-----------------------~CdC~l~~l~~~~~~~~~~ 319 (604)
|++|+.|+|.+|+|..|+..+|..|.+|++|+|.+|++ .|||+++||..|+......
T Consensus 391 l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql~Wl~qWl~~~~lq 470 (873)
T KOG4194|consen 391 LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQLKWLAQWLYRRKLQ 470 (873)
T ss_pred chhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEeccHHHHHHHHHhcccc
Confidence 77777777777888888888888888888888888765 4999999999999876554
Q ss_pred -CCccccCCCCcccccccccCCCCceeecCcc
Q psy15407 320 -PGIARCTEPASMRDKLLLTAPASSFQCKEKV 350 (604)
Q Consensus 320 -~~~~~C~~P~~l~g~~l~~~~~~~~~C~~~~ 350 (604)
...+.|+.|+.+.|+.+..++..+|.|....
T Consensus 471 ~sv~a~CayPe~Lad~~i~svd~~~lvC~Dsp 502 (873)
T KOG4194|consen 471 SSVIAKCAYPEPLADQSIVSVDTANLVCDDSP 502 (873)
T ss_pred cceeeeccCCcccccceeEeechhhceecCCC
Confidence 3457999999999999999999999998543
No 3
>KOG4237|consensus
Probab=99.94 E-value=1.8e-28 Score=237.08 Aligned_cols=278 Identities=20% Similarity=0.276 Sum_probs=214.6
Q ss_pred CCceecccCceeeecchhhHHHHHHhCCccccCCCCcCCCCCcccccCcccccCCCCceeecCCCCCcCccccccccCCc
Q psy15407 2 GGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGVEEFRTRYAGD 81 (604)
Q Consensus 2 ~~~~~~~~np~~C~C~l~w~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 81 (604)
+.|-.-|+|||+|||||.|+++++..+++++.+ ++|..|.+++.+|+.++++.+|+|. ++.+....+.+
T Consensus 190 i~tlhlA~np~icdCnL~wla~~~a~~~ietsg----arc~~p~rl~~~Ri~q~~a~kf~c~-------~esl~s~~~~~ 258 (498)
T KOG4237|consen 190 IKTLHLAQNPFICDCNLPWLADDLAMNPIETSG----ARCVSPYRLYYKRINQEDARKFLCS-------LESLPSRLSSE 258 (498)
T ss_pred cchHhhhcCccccccccchhhhHHhhchhhccc----ceecchHHHHHHHhcccchhhhhhh-------HHhHHHhhccc
Confidence 445667999999999999999999999999988 9999999999999999999999997 66777788999
Q ss_pred ccCCCCCCCCCeeC---CCeEEcCCCCCCcCCCCCC---ccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceec
Q psy15407 82 CLIDAACPSGCSCD---GTRVDCSQRGLKEIPKDIP---LYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGI 155 (604)
Q Consensus 82 c~~~~~CP~~C~C~---~~~l~cs~~~L~~iP~~l~---~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i 155 (604)
|.++..||..|.=. -+.|++++|.|+.|-++.+ ..+++|+|..|+|..+.. ++|.+|..|+.|+|.+|+|+.+
T Consensus 259 d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~-~~f~~ls~L~tL~L~~N~it~~ 337 (498)
T KOG4237|consen 259 DFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSS-GMFQGLSGLKTLSLYDNQITTV 337 (498)
T ss_pred cCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHH-HhhhccccceeeeecCCeeEEE
Confidence 99999999999642 4689999999999977654 456999999999999975 7899999999999999999999
Q ss_pred CCCcCCCcccCCcCCCCCCCCCccccccEEEccC--Cc-------------cccccccccceeee-----eeccc-cCCc
Q psy15407 156 EDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDG--RA-------------GECYIAVELFSSRI-----RVSYY-VGNY 214 (604)
Q Consensus 156 ~~~~f~~l~~L~~L~l~~~~~~~~~~l~~l~~~~--~~-------------~~~~~~~~~~~~~~-----~~~~~-~~~~ 214 (604)
.+.+|..+..|..|.|..||+.+.+.+..+.-.. .. ..+.+....+.... ...-. ...-
T Consensus 338 ~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~c 417 (498)
T KOG4237|consen 338 APGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPC 417 (498)
T ss_pred ecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCC
Confidence 9999999999999999999999988776553211 00 01111111000000 00000 0000
Q ss_pred cc----cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccc
Q psy15407 215 PV----STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAI 290 (604)
Q Consensus 215 ~~----~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L 290 (604)
|. --+....|++.++.+++.. -...++|+|.+|.|+.|+.. .+.+| .+||++|+|+.+....|.+|.+|
T Consensus 418 P~~c~c~~tVvRcSnk~lk~lp~~i---P~d~telyl~gn~~~~vp~~---~~~~l-~~dls~n~i~~Lsn~tf~n~tql 490 (498)
T KOG4237|consen 418 PPPCTCLDTVVRCSNKLLKLLPRGI---PVDVTELYLDGNAITSVPDE---LLRSL-LLDLSNNRISSLSNYTFSNMTQL 490 (498)
T ss_pred CCCcchhhhhHhhcccchhhcCCCC---CchhHHHhcccchhcccCHH---HHhhh-hcccccCceehhhcccccchhhh
Confidence 00 0112345566666666543 22467889999999999766 45677 89999999999999999999999
Q ss_pred eeeeccCC
Q psy15407 291 THLAIGGN 298 (604)
Q Consensus 291 ~~L~L~~N 298 (604)
.+|-|+.|
T Consensus 491 ~tlilsyn 498 (498)
T KOG4237|consen 491 STLILSYN 498 (498)
T ss_pred heeEEecC
Confidence 99988876
No 4
>KOG4194|consensus
Probab=99.86 E-value=9e-23 Score=206.30 Aligned_cols=217 Identities=29% Similarity=0.433 Sum_probs=160.9
Q ss_pred CCCCCCCeeCCCeEEcCCCCCCcC-----CCCCCccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcC
Q psy15407 86 AACPSGCSCDGTRVDCSQRGLKEI-----PKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAF 160 (604)
Q Consensus 86 ~~CP~~C~C~~~~l~cs~~~L~~i-----P~~l~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f 160 (604)
..||..|.|....+||+.+.|..+ +..+|..++.|+|++|+|+.|... .|.+|++|+.++|.+|.++.|+. |
T Consensus 44 ~~cpa~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~-~f~nl~nLq~v~l~~N~Lt~IP~--f 120 (873)
T KOG4194|consen 44 SECPATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFE-FFYNLPNLQEVNLNKNELTRIPR--F 120 (873)
T ss_pred ccCCCcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHH-HHhcCCcceeeeeccchhhhccc--c
Confidence 469999999999999999999986 667899999999999999999774 48999999999999999999875 4
Q ss_pred CCcc-cCCcCCCCCCCCCc--------cccccEEEccCCccc---------------cccccccceeeeeeccccCCccc
Q psy15407 161 EGEN-DQGCLGDNYCPPKC--------TCTVRVLFYDGRAGE---------------CYIAVELFSSRIRVSYYVGNYPV 216 (604)
Q Consensus 161 ~~l~-~L~~L~l~~~~~~~--------~~~l~~l~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~ 216 (604)
.+.. .|+.|+|.+|-+.. +..++.++++.|... +.+..|.+... ....|... .
T Consensus 121 ~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l-~~~~F~~l-n- 197 (873)
T KOG4194|consen 121 GHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTL-ETGHFDSL-N- 197 (873)
T ss_pred cccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccc-cccccccc-c-
Confidence 4443 37777777774332 334444555443221 11111111111 11112222 2
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeecc
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIG 296 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 296 (604)
+|..|.|++|+|+.++...|.+|++|+.|+|..|+|+.+.-.+|.+|++|+.|.|..|.|+.+..++|-.+.++++|+|+
T Consensus 198 sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~ 277 (873)
T KOG4194|consen 198 SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLE 277 (873)
T ss_pred hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecc
Confidence 67778888888888888888888888888888888888877888888888888888888888888999999999999999
Q ss_pred CCCcccccCCCcc
Q psy15407 297 GNPLYCDCGLAWL 309 (604)
Q Consensus 297 ~Npl~CdC~l~~l 309 (604)
.|.+.= -.-.|+
T Consensus 278 ~N~l~~-vn~g~l 289 (873)
T KOG4194|consen 278 TNRLQA-VNEGWL 289 (873)
T ss_pred cchhhh-hhcccc
Confidence 998862 233454
No 5
>KOG4289|consensus
Probab=99.85 E-value=8.5e-21 Score=205.03 Aligned_cols=105 Identities=43% Similarity=1.117 Sum_probs=92.9
Q ss_pred CCCcCCCCCCCCeeecC---------------------CCCceeeeCCCCCcCCCCcccCCCCCCCCCCCCCeeeeCCCC
Q psy15407 359 NACYKSPCTNQGVCEPL---------------------PERQYQCRCTPGYHGQHCEFMIDACYGNPCRNSGTCKLLEEG 417 (604)
Q Consensus 359 ~~C~~~~C~~~g~C~~~---------------------~~~~~~C~C~~g~~G~~c~~~~~~C~~~~C~~~~~C~~~~~~ 417 (604)
+.|...||.|...|... +.++++|.||+||+|..|++.+|.|+..||.++|+|.. ..|
T Consensus 1180 niClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~CeTeiDlCYs~pC~nng~C~s-rEg 1258 (2531)
T KOG4289|consen 1180 NICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCETEIDLCYSGPCGNNGRCRS-REG 1258 (2531)
T ss_pred chhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCcccccchhHhhhcCCCCCCCceEE-ecC
Confidence 66888999998888742 34679999999999999999999999999999999987 578
Q ss_pred ceEeeCCCCCcCCCCCcCC--CcCCCCCCCCCcEEEeC-CCCeEEecCCC
Q psy15407 418 RFNCECAPGYTGDRCEINI--DDCLSHKCENNATCVDL-IQAYECRCAPG 464 (604)
Q Consensus 418 ~~~C~C~~g~~g~~C~~~~--~~C~~~~C~~~~~C~~~-~~~~~C~C~~g 464 (604)
+|+|.|.+||+|+.||++. ..|.+..|.++|+|++. .+++.|.|+.|
T Consensus 1259 gYtCeCrpg~tGehCEvs~~agrCvpGvC~nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1259 GYTCECRPGFTGEHCEVSARAGRCVPGVCKNGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred ceeEEecCCccccceeeecccCccccceecCCCEEeecCCCceeccCCCc
Confidence 9999999999999999654 46889999999999985 57799999987
No 6
>KOG0444|consensus
Probab=99.75 E-value=3.5e-20 Score=188.80 Aligned_cols=200 Identities=25% Similarity=0.245 Sum_probs=119.7
Q ss_pred CCeEEcCCCCCCcCCCCC--CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCC
Q psy15407 96 GTRVDCSQRGLKEIPKDI--PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNY 173 (604)
Q Consensus 96 ~~~l~cs~~~L~~iP~~l--~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~ 173 (604)
-++||+|+|+|+++|..+ ..+...|+|++|+|.+||. .+|-+|..|-.||||+|+|..++|. ...|..|++|.|++
T Consensus 105 Lt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn-~lfinLtDLLfLDLS~NrLe~LPPQ-~RRL~~LqtL~Ls~ 182 (1255)
T KOG0444|consen 105 LTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPN-SLFINLTDLLFLDLSNNRLEMLPPQ-IRRLSMLQTLKLSN 182 (1255)
T ss_pred ceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCc-hHHHhhHhHhhhccccchhhhcCHH-HHHHhhhhhhhcCC
Confidence 378999999999999988 5677899999999999986 5799999999999999999999885 56788999999999
Q ss_pred CCCCcc--------ccccEEEccCCccccc-cccccc---------eeeeeeccccCC--ccccceeecCCCCceeeccC
Q psy15407 174 CPPKCT--------CTVRVLFYDGRAGECY-IAVELF---------SSRIRVSYYVGN--YPVSTMYRDLSNNQIGFLSN 233 (604)
Q Consensus 174 ~~~~~~--------~~l~~l~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~--~~~~L~~L~Ls~N~i~~l~~ 233 (604)
||+..+ .+|.++.+++...++. ++..+- .+.+.+...+.. ...+|+.|+||+|+|+.+..
T Consensus 183 NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~ 262 (1255)
T KOG0444|consen 183 NPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNM 262 (1255)
T ss_pred ChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeeeec
Confidence 986542 3344444443222211 111000 000111111000 00144445555555554433
Q ss_pred CCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccc--cCCcccccCcccceeeeccCCCc
Q psy15407 234 FTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDIS--MIPEGAFADLHAITHLAIGGNPL 300 (604)
Q Consensus 234 ~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~--~i~~~~f~~l~~L~~L~L~~Npl 300 (604)
......+|++|+||+|+|+.+ |+++-.|++|+.|.+.+|+|+ .||.+ ++.|..|+.+.+++|.+
T Consensus 263 -~~~~W~~lEtLNlSrNQLt~L-P~avcKL~kL~kLy~n~NkL~FeGiPSG-IGKL~~Levf~aanN~L 328 (1255)
T KOG0444|consen 263 -TEGEWENLETLNLSRNQLTVL-PDAVCKLTKLTKLYANNNKLTFEGIPSG-IGKLIQLEVFHAANNKL 328 (1255)
T ss_pred -cHHHHhhhhhhccccchhccc-hHHHhhhHHHHHHHhccCcccccCCccc-hhhhhhhHHHHhhcccc
Confidence 223334455555555555554 344445555555555555543 44443 34455555556666655
No 7
>KOG4289|consensus
Probab=99.73 E-value=1.9e-17 Score=179.62 Aligned_cols=105 Identities=37% Similarity=0.934 Sum_probs=90.1
Q ss_pred CCCCCCCCCCCCeeeeC---------------------CCCceEeeCCCCCcCCCCCcCCCcCCCCCCCCCcEEEeCCCC
Q psy15407 398 DACYGNPCRNSGTCKLL---------------------EEGRFNCECAPGYTGDRCEINIDDCLSHKCENNATCVDLIQA 456 (604)
Q Consensus 398 ~~C~~~~C~~~~~C~~~---------------------~~~~~~C~C~~g~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~ 456 (604)
+.|...||.+...|... ..++++|.|++||+|+.|+..+|.|...||.++|.|....|+
T Consensus 1180 niClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~CeTeiDlCYs~pC~nng~C~srEgg 1259 (2531)
T KOG4289|consen 1180 NICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCETEIDLCYSGPCGNNGRCRSREGG 1259 (2531)
T ss_pred chhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCcccccchhHhhhcCCCCCCCceEEecCc
Confidence 45888899888777432 347789999999999999999999999999999999999999
Q ss_pred eEEecCCCCCCCCcccCCC--cCCCCCCCCCCCCceeec-CCCeEEecCCC
Q psy15407 457 YECRCAPGFQGEFCQTKTP--FCAGEYNPCRNGARCLDH-FSHYTCECTPG 504 (604)
Q Consensus 457 ~~C~C~~g~~g~~C~~~~~--~C~~~~~~C~~~~~C~~~-~~~~~C~C~~g 504 (604)
|+|.|.+||+|+.|+.+.. .|. ++.|.++++|++. .+++.|.|+.|
T Consensus 1260 YtCeCrpg~tGehCEvs~~agrCv--pGvC~nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1260 YTCECRPGFTGEHCEVSARAGRCV--PGVCKNGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred eeEEecCCccccceeeecccCccc--cceecCCCEEeecCCCceeccCCCc
Confidence 9999999999999987653 354 4689999999876 46788999887
No 8
>KOG1219|consensus
Probab=99.69 E-value=3.8e-17 Score=183.10 Aligned_cols=113 Identities=36% Similarity=1.009 Sum_probs=108.2
Q ss_pred CCCcCCCCCCCCeeecCCCCceeeeCCCCCcCCCCcccCCCCCCCCCCCCCeeeeCCCCceEeeCCCCCcCCCCCcC-CC
Q psy15407 359 NACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEFMIDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEIN-ID 437 (604)
Q Consensus 359 ~~C~~~~C~~~g~C~~~~~~~~~C~C~~g~~G~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~g~~C~~~-~~ 437 (604)
++|..+||.++|+|+..+.++|+|.|++.|.|.+||.++..|..+||..+|+|+. ..+.|.|.|+.||+|.+||.. ++
T Consensus 3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip-~~n~f~CnC~~gyTG~~Ce~~Gi~ 3943 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIP-FYNGFLCNCPNGYTGKRCEARGIS 3943 (4289)
T ss_pred cccccCcccCCCEecCCCCCceEEeCcccccCcccccccccccCCCCCCCCEEEe-cCCCeeEeCCCCccCceeeccccc
Confidence 7899999999999999999999999999999999999999999999999999987 478999999999999999987 99
Q ss_pred cCCCCCCCCCcEEEeCCCCeEEecCCCCCCCCccc
Q psy15407 438 DCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQT 472 (604)
Q Consensus 438 ~C~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~~ 472 (604)
+|..++|.++|.|++..|+|.|.|.+||.|+.|..
T Consensus 3944 eCs~n~C~~gg~C~n~~gsf~CncT~g~~gr~c~~ 3978 (4289)
T KOG1219|consen 3944 ECSKNVCGTGGQCINIPGSFHCNCTPGILGRTCCA 3978 (4289)
T ss_pred ccccccccCCceeeccCCceEeccChhHhcccCcc
Confidence 99999999999999999999999999999999853
No 9
>KOG0617|consensus
Probab=99.66 E-value=2.3e-18 Score=148.89 Aligned_cols=172 Identities=23% Similarity=0.346 Sum_probs=140.0
Q ss_pred CeEEcCCCCCCcCCCCCC--ccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCC
Q psy15407 97 TRVDCSQRGLKEIPKDIP--LYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYC 174 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~l~--~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~ 174 (604)
+.|.+|+|+|+.||..|. .+++.|+|++|+|+.+|.. ++.|++|+.|+++-|++..++ ..|..++.|+.|+|.+|
T Consensus 36 TrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~--issl~klr~lnvgmnrl~~lp-rgfgs~p~levldltyn 112 (264)
T KOG0617|consen 36 TRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTS--ISSLPKLRILNVGMNRLNILP-RGFGSFPALEVLDLTYN 112 (264)
T ss_pred hhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChh--hhhchhhhheecchhhhhcCc-cccCCCchhhhhhcccc
Confidence 678999999999999884 5679999999999999876 899999999999999987665 56999999999999986
Q ss_pred CCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCccee
Q psy15407 175 PPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQC 254 (604)
Q Consensus 175 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~ 254 (604)
... +-.++.+.| ....|..|.|+.|.+..+++ ..+.|++|+.|.|..|.+-+
T Consensus 113 nl~---------------e~~lpgnff------------~m~tlralyl~dndfe~lp~-dvg~lt~lqil~lrdndll~ 164 (264)
T KOG0617|consen 113 NLN---------------ENSLPGNFF------------YMTTLRALYLGDNDFEILPP-DVGKLTNLQILSLRDNDLLS 164 (264)
T ss_pred ccc---------------cccCCcchh------------HHHHHHHHHhcCCCcccCCh-hhhhhcceeEEeeccCchhh
Confidence 532 111111111 12367888999999998887 57889999999999999999
Q ss_pred eeccccCCCCcccEEEccCCccccCCcccccCc---ccceeeeccCCCcc
Q psy15407 255 IDRDALAGLKSLRIISLHGNDISMIPEGAFADL---HAITHLAIGGNPLY 301 (604)
Q Consensus 255 i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l---~~L~~L~L~~Npl~ 301 (604)
+ |..++.|..|+.|.+.+|+|+.+|++ ++.+ .+-+.+.+..|||.
T Consensus 165 l-pkeig~lt~lrelhiqgnrl~vlppe-l~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 165 L-PKEIGDLTRLRELHIQGNRLTVLPPE-LANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred C-cHHHHHHHHHHHHhcccceeeecChh-hhhhhhhhhHHHHhhhhCCCC
Confidence 9 55688899999999999999999996 3333 23456788899996
No 10
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.62 E-value=1.3e-15 Score=167.59 Aligned_cols=57 Identities=25% Similarity=0.464 Sum_probs=45.5
Q ss_pred CCeEEcCCCCCCcCCCCCCccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCC
Q psy15407 96 GTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIED 157 (604)
Q Consensus 96 ~~~l~cs~~~L~~iP~~l~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~ 157 (604)
...|+|++++|++||..++..++.|+|.+|+|+.||. .+++|++|+|++|+|+.|+.
T Consensus 203 ~~~LdLs~~~LtsLP~~l~~~L~~L~L~~N~Lt~LP~-----lp~~Lk~LdLs~N~LtsLP~ 259 (788)
T PRK15387 203 NAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPA-----LPPELRTLEVSGNQLTSLPV 259 (788)
T ss_pred CcEEEcCCCCCCcCCcchhcCCCEEEccCCcCCCCCC-----CCCCCcEEEecCCccCcccC
Confidence 4578899999999998888888888888888888864 15778888888888877753
No 11
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.62 E-value=1.1e-15 Score=179.48 Aligned_cols=203 Identities=20% Similarity=0.162 Sum_probs=114.4
Q ss_pred CeEEcCCCCCC-cCCCCCCccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCC
Q psy15407 97 TRVDCSQRGLK-EIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCP 175 (604)
Q Consensus 97 ~~l~cs~~~L~-~iP~~l~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~ 175 (604)
+.|++++|+++ .+|......+++|+|++|.|+...+.. |..+++|++|+|++|.+....+..|..+.+|++|+|++|.
T Consensus 121 ~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 199 (968)
T PLN00113 121 RYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPND-IGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQ 199 (968)
T ss_pred CEEECcCCccccccCccccCCCCEEECcCCcccccCChH-HhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCC
Confidence 56666666665 455555556677777777775332322 6777777777777777776666777777777777777764
Q ss_pred CC--------ccccccEEEccCCcccccccccc--cee-------eee----eccccCCccccceeecCCCCceeeccCC
Q psy15407 176 PK--------CTCTVRVLFYDGRAGECYIAVEL--FSS-------RIR----VSYYVGNYPVSTMYRDLSNNQIGFLSNF 234 (604)
Q Consensus 176 ~~--------~~~~l~~l~~~~~~~~~~~~~~~--~~~-------~~~----~~~~~~~~~~~L~~L~Ls~N~i~~l~~~ 234 (604)
+. .+..++.+.+..+.....++..+ ..+ ... +....+.+ .+|++|+|++|+|+...+.
T Consensus 200 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~ 278 (968)
T PLN00113 200 LVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL-KNLQYLFLYQNKLSGPIPP 278 (968)
T ss_pred CcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCC-CCCCEEECcCCeeeccCch
Confidence 32 23344445444332221111100 000 000 00001111 2556666666666555555
Q ss_pred CCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCcc
Q psy15407 235 TFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 235 ~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~ 301 (604)
.|..+++|+.|+|++|+|....|..|..+++|+.|+|++|.++...+..|..+++|+.|+|++|.+.
T Consensus 279 ~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 345 (968)
T PLN00113 279 SIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFS 345 (968)
T ss_pred hHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCc
Confidence 5566666666666666666555556666666666666666666555555666666666666666654
No 12
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.62 E-value=1.4e-15 Score=178.72 Aligned_cols=205 Identities=20% Similarity=0.151 Sum_probs=134.2
Q ss_pred CeEEcCCCCCC-cCCCCC--CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCC
Q psy15407 97 TRVDCSQRGLK-EIPKDI--PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNY 173 (604)
Q Consensus 97 ~~l~cs~~~L~-~iP~~l--~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~ 173 (604)
+.|++++|.++ .+|..+ ...++.|+|++|.|....+. .|..+++|+.|+|++|+|+...+..|..++.|+.|++++
T Consensus 359 ~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~-~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 437 (968)
T PLN00113 359 TVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPK-SLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISN 437 (968)
T ss_pred cEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCH-HHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcC
Confidence 56777777776 456544 24556777777776544332 266677777777777777666666666777777777766
Q ss_pred CCCC--------ccccccEEEccCCccc--------------cccccccceeeeeeccccCCccccceeecCCCCceeec
Q psy15407 174 CPPK--------CTCTVRVLFYDGRAGE--------------CYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFL 231 (604)
Q Consensus 174 ~~~~--------~~~~l~~l~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l 231 (604)
|.+. ....++.+.+..+... +.+..+.+... .......+ .+|+.|+|++|+++..
T Consensus 438 N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~--~~~~~~~l-~~L~~L~Ls~N~l~~~ 514 (968)
T PLN00113 438 NNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGA--VPRKLGSL-SELMQLKLSENKLSGE 514 (968)
T ss_pred CcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCc--cChhhhhh-hccCEEECcCCcceee
Confidence 6432 2234444444433221 11111111100 00011112 3678888888888887
Q ss_pred cCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCcccccC
Q psy15407 232 SNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDCG 305 (604)
Q Consensus 232 ~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~CdC~ 305 (604)
.+..|..+++|++|+|++|.|+...|..|..+++|+.|+|++|+++...+..+..+.+|+.|+|++|++.....
T Consensus 515 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 515 IPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 77788888889999999999888888888888889999999998886555567888888999999998876544
No 13
>KOG1219|consensus
Probab=99.62 E-value=9.3e-16 Score=172.29 Aligned_cols=117 Identities=33% Similarity=1.004 Sum_probs=108.8
Q ss_pred CcccCCCCCCCCCCCCCeeeeCCCCceEeeCCCCCcCCCCCcCCCcCCCCCCCCCcEEEeCCCCeEEecCCCCCCCCccc
Q psy15407 393 CEFMIDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEINIDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQT 472 (604)
Q Consensus 393 c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~~ 472 (604)
|..-.+.|..+||+++|+|.....|+|.|.|++.|.|..||.++.+|.++||..+|+|+...++|.|.|+.||+|..|+.
T Consensus 3860 C~l~~d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~~Ce~ 3939 (4289)
T KOG1219|consen 3860 CSLLTDPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGKRCEA 3939 (4289)
T ss_pred ccccccccccCcccCCCEecCCCCCceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccCceeec
Confidence 43334789999999999999888899999999999999999999999999999999999999999999999999999998
Q ss_pred C-CCcCCCCCCCCCCCCceeecCCCeEEecCCCCcCCcCc
Q psy15407 473 K-TPFCAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCT 511 (604)
Q Consensus 473 ~-~~~C~~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~c~ 511 (604)
. +++|.. +.|.++|.|++..|+|.|.|.+||.|..|.
T Consensus 3940 ~Gi~eCs~--n~C~~gg~C~n~~gsf~CncT~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3940 RGISECSK--NVCGTGGQCINIPGSFHCNCTPGILGRTCC 3977 (4289)
T ss_pred cccccccc--ccccCCceeeccCCceEeccChhHhcccCc
Confidence 8 899986 599999999999999999999999999985
No 14
>KOG0444|consensus
Probab=99.61 E-value=3.7e-17 Score=167.00 Aligned_cols=201 Identities=22% Similarity=0.242 Sum_probs=154.6
Q ss_pred CeEEcCCCCCC--cCCCCCC--ccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCC
Q psy15407 97 TRVDCSQRGLK--EIPKDIP--LYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDN 172 (604)
Q Consensus 97 ~~l~cs~~~L~--~iP~~l~--~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~ 172 (604)
+.|+.++|+|+ -||.+|+ ..++.|+|++|+++.+|.. +..-+++..|+||+|+|..|+...|.+|..|-.|+|+
T Consensus 81 Rsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~--LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS 158 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTN--LEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLS 158 (1255)
T ss_pred HHHhhhccccccCCCCchhcccccceeeecchhhhhhcchh--hhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccc
Confidence 57888999997 5899885 5679999999999999875 8889999999999999999999999999999999999
Q ss_pred CCCCCc-------cccccEEEccCCccccccccccce--------------eeeeeccccCCccccceeecCCCCceeec
Q psy15407 173 YCPPKC-------TCTVRVLFYDGRAGECYIAVELFS--------------SRIRVSYYVGNYPVSTMYRDLSNNQIGFL 231 (604)
Q Consensus 173 ~~~~~~-------~~~l~~l~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l 231 (604)
+|.+.. +..|+.+.++.|.....-...+-. ...+++.....+ .+|..+|||.|.+..+
T Consensus 159 ~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l-~NL~dvDlS~N~Lp~v 237 (1255)
T KOG0444|consen 159 NNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDL-HNLRDVDLSENNLPIV 237 (1255)
T ss_pred cchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhh-hhhhhccccccCCCcc
Confidence 996544 345666666665433222211110 001111111111 2677889999999988
Q ss_pred cCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCcccc
Q psy15407 232 SNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCD 303 (604)
Q Consensus 232 ~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~Cd 303 (604)
|. .+-.+.+|+.|+||+|+|+.+. .......+|++|+||.|+|+.+|. ++..|++|+.|.+.+|.+.=+
T Consensus 238 Pe-cly~l~~LrrLNLS~N~iteL~-~~~~~W~~lEtLNlSrNQLt~LP~-avcKL~kL~kLy~n~NkL~Fe 306 (1255)
T KOG0444|consen 238 PE-CLYKLRNLRRLNLSGNKITELN-MTEGEWENLETLNLSRNQLTVLPD-AVCKLTKLTKLYANNNKLTFE 306 (1255)
T ss_pred hH-HHhhhhhhheeccCcCceeeee-ccHHHHhhhhhhccccchhccchH-HHhhhHHHHHHHhccCccccc
Confidence 76 5567899999999999999984 345566889999999999999987 577899999999999998754
No 15
>KOG1217|consensus
Probab=99.61 E-value=1.9e-14 Score=155.89 Aligned_cols=213 Identities=37% Similarity=0.920 Sum_probs=140.2
Q ss_pred CcCCC--CCCCCeeecCC--CCceeeeCCCCCcCCCCcccCCCCC--CCCCCCCCeeeeCCCCceEeeCCCCCcCCCCCc
Q psy15407 361 CYKSP--CTNQGVCEPLP--ERQYQCRCTPGYHGQHCEFMIDACY--GNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEI 434 (604)
Q Consensus 361 C~~~~--C~~~g~C~~~~--~~~~~C~C~~g~~G~~c~~~~~~C~--~~~C~~~~~C~~~~~~~~~C~C~~g~~g~~C~~ 434 (604)
|...+ +...+.|...+ .+.+.|.|..||.|..++...++|. ..+|.+++.|.+. .+.|.|.|++||.|..|+.
T Consensus 129 C~~~~~~~~~~~~c~~~~~~~~~~~c~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~-~~~~~C~c~~~~~~~~~~~ 207 (487)
T KOG1217|consen 129 CVTGPGVCCIDGSCSNGPGSVGPFRCSCTEGYEGEPCETDLDECIQYSSPCQNGGTCVNT-GGSYLCSCPPGYTGSTCET 207 (487)
T ss_pred ecCCCCCeeCchhhcCCCCCCCceeeeeCCCcccccccccccccccCCCCcCCCcccccC-CCCeeEeCCCCccCCcCcC
Confidence 55544 24455555442 2456666666666666665445665 2336666666553 3446666666666666653
Q ss_pred CCCcCCCCCCCCCcEEEeCCCCeEEecCCCCCCCCcccCCCcCCCCCCCCCCCCceeecCCCeEEecCCCCcCCc--Ccc
Q psy15407 435 NIDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQTKTPFCAGEYNPCRNGARCLDHFSHYTCECTPGFSGVN--CTV 512 (604)
Q Consensus 435 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~~~~~~C~~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~--c~~ 512 (604)
. .+++.|++. +.|.+..|+.+..|...+.+|... + +.|++..++|+|.|++||.+.. ...
T Consensus 208 ~---------~~~~~c~~~---~~~~~~~g~~~~~c~~~~~~~~~~-----~-~~c~~~~~~~~C~~~~g~~~~~~~~~~ 269 (487)
T KOG1217|consen 208 T---------GNGGTCVDS---VACSCPPGARGPECEVSIVECASG-----D-GTCVNTVGSYTCRCPEGYTGDACVTCV 269 (487)
T ss_pred C---------CCCceEecc---eeccCCCCCCCCCcccccccccCC-----C-CcccccCCceeeeCCCCccccccceee
Confidence 2 233445443 456666666666665544444321 3 7899999999999999999987 345
Q ss_pred cCCCCCCCC-CCCCCEEeeCCCCeEeeeCCCCccCCCCcCcccccCCCCCCCC----CCCCCCCCc-eeCCCCCCCeeee
Q psy15407 513 NVDDCVNHM-CQNGGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPC----QHHDCKNGI-CFQPQGSNDYLCK 586 (604)
Q Consensus 513 ~~~~C~~~~-C~~~~~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C----~~~~C~~g~-C~~~~g~~~~~C~ 586 (604)
+++.|.... |.++++|++..+.|.|.|++||+|..|.. ......| ....|.++. |......+.+.|.
T Consensus 270 ~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~~~-------~~~~~~C~~~~~~~~c~~g~~C~~~~~~~~~~C~ 342 (487)
T KOG1217|consen 270 DVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLCTE-------CVDVDECSPRNAGGPCANGGTCNTLGSFGGFRCA 342 (487)
T ss_pred eccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCCcc-------ccccccccccccCCcCCCCcccccCCCCCCCCcC
Confidence 788998754 99999999999999999999999999811 0113445 344577774 8444433678899
Q ss_pred cCCCCcCCCCCCC
Q psy15407 587 CAPGYSGKESLLQ 599 (604)
Q Consensus 587 C~~G~~G~~C~~~ 599 (604)
|..||.|..|+..
T Consensus 343 c~~~~~g~~C~~~ 355 (487)
T KOG1217|consen 343 CGPGFTGRRCEDS 355 (487)
T ss_pred CCCCCCCCccccC
Confidence 9999999999865
No 16
>KOG1217|consensus
Probab=99.59 E-value=3.7e-14 Score=153.63 Aligned_cols=223 Identities=37% Similarity=0.899 Sum_probs=174.2
Q ss_pred CceeecCcccccc---cccCCCCc--CCCCCCCCeeecCCCCceeeeCCCCCcCCCCcccCCCCCCCCCCCCCeeeeCCC
Q psy15407 342 SSFQCKEKVSDEI---LSKCNACY--KSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEFMIDACYGNPCRNSGTCKLLEE 416 (604)
Q Consensus 342 ~~~~C~~~~~~~~---~~~c~~C~--~~~C~~~g~C~~~~~~~~~C~C~~g~~G~~c~~~~~~C~~~~C~~~~~C~~~~~ 416 (604)
..+.|....++.. ....+.|. ..+|.+++.|.+.. +.|.|.|+.||.|..|+.. .+.+.|...
T Consensus 150 ~~~~c~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~~-~~~~C~c~~~~~~~~~~~~---------~~~~~c~~~-- 217 (487)
T KOG1217|consen 150 GPFRCSCTEGYEGEPCETDLDECIQYSSPCQNGGTCVNTG-GSYLCSCPPGYTGSTCETT---------GNGGTCVDS-- 217 (487)
T ss_pred CceeeeeCCCcccccccccccccccCCCCcCCCcccccCC-CCeeEeCCCCccCCcCcCC---------CCCceEecc--
Confidence 4566655544432 22335787 44699999999876 4599999999999999854 445667542
Q ss_pred CceEeeCCCCCcCCCCCcCCCcCCCCCCCCCcEEEeCCCCeEEecCCCCCCCC--cccCCCcCCCCCCCCCCCCceeecC
Q psy15407 417 GRFNCECAPGYTGDRCEINIDDCLSHKCENNATCVDLIQAYECRCAPGFQGEF--CQTKTPFCAGEYNPCRNGARCLDHF 494 (604)
Q Consensus 417 ~~~~C~C~~g~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~--C~~~~~~C~~~~~~C~~~~~C~~~~ 494 (604)
+.|.+..|+.+..|+..+.+|... + ++|++..++|.|.|++||.+.. ...+++.|..... |.++++|++..
T Consensus 218 --~~~~~~~g~~~~~c~~~~~~~~~~---~-~~c~~~~~~~~C~~~~g~~~~~~~~~~~~~~C~~~~~-c~~~~~C~~~~ 290 (487)
T KOG1217|consen 218 --VACSCPPGARGPECEVSIVECASG---D-GTCVNTVGSYTCRCPEGYTGDACVTCVDVDSCALIAS-CPNGGTCVNVP 290 (487)
T ss_pred --eeccCCCCCCCCCcccccccccCC---C-CcccccCCceeeeCCCCccccccceeeeccccCCCCc-cCCCCeeecCC
Confidence 679999999999999888887665 5 8999999999999999999986 3456788887654 99999999998
Q ss_pred CCeEEecCCCCcCCcC--cccCCCC----CCCCCCCCCEE--eeCCCCeEeeeCCCCccCCCCcCcccccCCCCCCCCCC
Q psy15407 495 SHYTCECTPGFSGVNC--TVNVDDC----VNHMCQNGGTC--VDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQH 566 (604)
Q Consensus 495 ~~~~C~C~~g~~g~~c--~~~~~~C----~~~~C~~~~~C--~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C~~ 566 (604)
+.|.|.|++||.|..| ..+..+| ...+|..+++| ....+.|.|.|..||.|..|+.. .+.|..
T Consensus 291 ~~~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~~c~~g~~C~~~~~~~~~~C~c~~~~~g~~C~~~---------~~~C~~ 361 (487)
T KOG1217|consen 291 GSYRCTCPPGFTGRLCTECVDVDECSPRNAGGPCANGGTCNTLGSFGGFRCACGPGFTGRRCEDS---------NDECAS 361 (487)
T ss_pred CcceeeCCCCCCCCCCccccccccccccccCCcCCCCcccccCCCCCCCCcCCCCCCCCCccccC---------CccccC
Confidence 8899999999999998 3345677 35679998899 34456788999999999999963 146766
Q ss_pred CCCCCCc-eeC-CCCCCCeeeecCCCCcCC
Q psy15407 567 HDCKNGI-CFQ-PQGSNDYLCKCAPGYSGK 594 (604)
Q Consensus 567 ~~C~~g~-C~~-~~g~~~~~C~C~~G~~G~ 594 (604)
..|.+++ |++ .. ++|.|.|+.||.|.
T Consensus 362 ~~~~~~~~c~~~~~--~~~~c~~~~~~~~~ 389 (487)
T KOG1217|consen 362 SPCCPGGTCVNETP--GSYRCACPAGFAGK 389 (487)
T ss_pred CccccCCEeccCCC--CCeEecCCCccccC
Confidence 6566655 988 56 78999999999985
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.58 E-value=4.2e-15 Score=164.45 Aligned_cols=189 Identities=22% Similarity=0.225 Sum_probs=107.5
Q ss_pred CCeEEcCCCCCCcCCCCCCccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCC
Q psy15407 96 GTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCP 175 (604)
Q Consensus 96 ~~~l~cs~~~L~~iP~~l~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~ 175 (604)
.+.|++++++|++||..+|..++.|+|++|+|+.||.. ++ ++|++|+|++|+|+.|+...+ .+|+.|+|++|.
T Consensus 180 ~~~L~L~~~~LtsLP~~Ip~~L~~L~Ls~N~LtsLP~~-l~---~nL~~L~Ls~N~LtsLP~~l~---~~L~~L~Ls~N~ 252 (754)
T PRK15370 180 KTELRLKILGLTTIPACIPEQITTLILDNNELKSLPEN-LQ---GNIKTLYANSNQLTSIPATLP---DTIQEMELSINR 252 (754)
T ss_pred ceEEEeCCCCcCcCCcccccCCcEEEecCCCCCcCChh-hc---cCCCEEECCCCccccCChhhh---ccccEEECcCCc
Confidence 46789999999999988888899999999999988763 22 578888999888888865433 356777777776
Q ss_pred CCccc-----cccEEEccCCccccccccccce-------eeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCC
Q psy15407 176 PKCTC-----TVRVLFYDGRAGECYIAVELFS-------SRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLS 243 (604)
Q Consensus 176 ~~~~~-----~l~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~ 243 (604)
+..++ .|..+.++.+.... ++..+.. +...+..++..++.+|+.|+|++|+|+.++... .++|+
T Consensus 253 L~~LP~~l~s~L~~L~Ls~N~L~~-LP~~l~~sL~~L~Ls~N~Lt~LP~~lp~sL~~L~Ls~N~Lt~LP~~l---~~sL~ 328 (754)
T PRK15370 253 ITELPERLPSALQSLDLFHNKISC-LPENLPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTALPETL---PPGLK 328 (754)
T ss_pred cCcCChhHhCCCCEEECcCCccCc-cccccCCCCcEEECCCCccccCcccchhhHHHHHhcCCccccCCccc---cccce
Confidence 54432 24444443332210 1110000 001111111122234455555555555444322 13555
Q ss_pred eEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCcc
Q psy15407 244 QLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 244 ~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~ 301 (604)
.|+|++|.|+.|+.. + .++|+.|+|++|+|+.+|... .++|+.|+|++|.+.
T Consensus 329 ~L~Ls~N~Lt~LP~~-l--~~sL~~L~Ls~N~L~~LP~~l---p~~L~~LdLs~N~Lt 380 (754)
T PRK15370 329 TLEAGENALTSLPAS-L--PPELQVLDVSKNQITVLPETL---PPTITTLDVSRNALT 380 (754)
T ss_pred eccccCCccccCChh-h--cCcccEEECCCCCCCcCChhh---cCCcCEEECCCCcCC
Confidence 666666666655332 2 145666666666666655432 235666666666554
No 18
>KOG0617|consensus
Probab=99.56 E-value=6.6e-17 Score=139.96 Aligned_cols=161 Identities=24% Similarity=0.327 Sum_probs=129.2
Q ss_pred CcCCCCC-CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCCCCccccccEE
Q psy15407 107 KEIPKDI-PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCTVRVL 185 (604)
Q Consensus 107 ~~iP~~l-~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~~~~~~~l~~l 185 (604)
.++|.-+ .+.++.|.|++|+|+.+|+. +..|.+|+.|+|++|+|+.++. ..+.|++|+.|.+..|...
T Consensus 24 ~~~~gLf~~s~ITrLtLSHNKl~~vppn--ia~l~nlevln~~nnqie~lp~-~issl~klr~lnvgmnrl~-------- 92 (264)
T KOG0617|consen 24 EELPGLFNMSNITRLTLSHNKLTVVPPN--IAELKNLEVLNLSNNQIEELPT-SISSLPKLRILNVGMNRLN-------- 92 (264)
T ss_pred hhcccccchhhhhhhhcccCceeecCCc--HHHhhhhhhhhcccchhhhcCh-hhhhchhhhheecchhhhh--------
Confidence 3556544 45679999999999999986 8999999999999999999976 4677888888776643321
Q ss_pred EccCCccccccccccceeeeeeccccCCccccceeecCCCCceee-ccCCCCCCCCCCCeEEecCCcceeeeccccCCCC
Q psy15407 186 FYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGF-LSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLK 264 (604)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~-l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~ 264 (604)
.+..-.+.+| .|+.|||++|++.+ .-++.|-.+..|+.|+|++|.+.-+++ ..+.|+
T Consensus 93 --------------------~lprgfgs~p-~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~-dvg~lt 150 (264)
T KOG0617|consen 93 --------------------ILPRGFGSFP-ALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPP-DVGKLT 150 (264)
T ss_pred --------------------cCccccCCCc-hhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCCh-hhhhhc
Confidence 1122223344 88999999999875 335567778999999999999998865 478899
Q ss_pred cccEEEccCCccccCCcccccCcccceeeeccCCCcc
Q psy15407 265 SLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 265 ~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~ 301 (604)
+|+.|.|..|.|-++|.+ +..|..|++|.+.+|.+.
T Consensus 151 ~lqil~lrdndll~lpke-ig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 151 NLQILSLRDNDLLSLPKE-IGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ceeEEeeccCchhhCcHH-HHHHHHHHHHhcccceee
Confidence 999999999999999885 788999999999999886
No 19
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.54 E-value=9.3e-15 Score=161.76 Aligned_cols=77 Identities=17% Similarity=0.197 Sum_probs=44.0
Q ss_pred ccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeec
Q psy15407 216 VSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAI 295 (604)
Q Consensus 216 ~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 295 (604)
.+|+.|+|++|.|+.++... .++|+.|+|++|+|+.++. .+ .++|+.|+|++|+|+.||+... .+|+.|++
T Consensus 325 ~sL~~L~Ls~N~Lt~LP~~l---~~sL~~L~Ls~N~L~~LP~-~l--p~~L~~LdLs~N~Lt~LP~~l~---~sL~~LdL 395 (754)
T PRK15370 325 PGLKTLEAGENALTSLPASL---PPELQVLDVSKNQITVLPE-TL--PPTITTLDVSRNALTNLPENLP---AALQIMQA 395 (754)
T ss_pred ccceeccccCCccccCChhh---cCcccEEECCCCCCCcCCh-hh--cCCcCEEECCCCcCCCCCHhHH---HHHHHHhh
Confidence 46666677777666665422 2466666666666666543 22 2456666666666666665422 23555555
Q ss_pred cCCCcc
Q psy15407 296 GGNPLY 301 (604)
Q Consensus 296 ~~Npl~ 301 (604)
++|.|.
T Consensus 396 s~N~L~ 401 (754)
T PRK15370 396 SRNNLV 401 (754)
T ss_pred ccCCcc
Confidence 555543
No 20
>KOG0472|consensus
Probab=99.50 E-value=6.5e-16 Score=150.64 Aligned_cols=171 Identities=21% Similarity=0.331 Sum_probs=115.8
Q ss_pred CeEEcCCCCCCcCCCCCCc-----cCcEEecCCCcceeecCCCccCCCCCCcE-EeCCCCcceecCCCcCCCcccCCcCC
Q psy15407 97 TRVDCSQRGLKEIPKDIPL-----YTTELILNDNEIGKIKSDGLFGRLPNLIK-LDLRRNQVTGIEDNAFEGENDQGCLG 170 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~l~~-----~~~~L~L~~N~i~~i~~~~~f~~l~~L~~-L~Ls~N~i~~i~~~~f~~l~~L~~L~ 170 (604)
++|+.+..+++.||..++. .++..+|+.|+|.++|.. +..++.|.+ |.|++|+|..+ +..+..+++|..|+
T Consensus 365 kiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~--L~~lkelvT~l~lsnn~isfv-~~~l~~l~kLt~L~ 441 (565)
T KOG0472|consen 365 KILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKR--LVELKELVTDLVLSNNKISFV-PLELSQLQKLTFLD 441 (565)
T ss_pred hhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhh--hHHHHHHHHHHHhhcCccccc-hHHHHhhhcceeee
Confidence 4566677777777765532 245667777777666653 444544433 34444444433 33445555666666
Q ss_pred CCCCCCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCC
Q psy15407 171 DNYCPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYN 250 (604)
Q Consensus 171 l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N 250 (604)
|++|+...++.- .+. ...|+.||||+|++..+|. ..-.+..|+.+..++|
T Consensus 442 L~NN~Ln~LP~e----------------------------~~~-lv~Lq~LnlS~NrFr~lP~-~~y~lq~lEtllas~n 491 (565)
T KOG0472|consen 442 LSNNLLNDLPEE----------------------------MGS-LVRLQTLNLSFNRFRMLPE-CLYELQTLETLLASNN 491 (565)
T ss_pred cccchhhhcchh----------------------------hhh-hhhhheecccccccccchH-HHhhHHHHHHHHhccc
Confidence 665543221110 000 1268889999999888876 3344556777777779
Q ss_pred cceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCcc
Q psy15407 251 KLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 251 ~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~ 301 (604)
+|..++++.+.+|.+|.+|||.+|.|..||+ .++++.+|++|+|.||||+
T Consensus 492 qi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp-~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 492 QIGSVDPSGLKNMRNLTTLDLQNNDLQQIPP-ILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccChHHhhhhhhcceeccCCCchhhCCh-hhccccceeEEEecCCccC
Confidence 9999999889999999999999999999998 4899999999999999997
No 21
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.49 E-value=5.4e-15 Score=134.08 Aligned_cols=83 Identities=33% Similarity=0.415 Sum_probs=26.2
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCc-ccccCcccceeeec
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPE-GAFADLHAITHLAI 295 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~L 295 (604)
+|+.|+|++|.|+.+.. |..++.|++|+|++|+|+.+.......+++|++|+|++|+|..+.. ..+..+++|+.|+|
T Consensus 43 ~L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L 120 (175)
T PF14580_consen 43 KLEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSL 120 (175)
T ss_dssp T--EEE-TTS--S--TT------TT--EEE--SS---S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-
T ss_pred CCCEEECCCCCCccccC--ccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeec
Confidence 44445555555555442 4445555666666666655532222345556666666666655433 23445566666666
Q ss_pred cCCCcc
Q psy15407 296 GGNPLY 301 (604)
Q Consensus 296 ~~Npl~ 301 (604)
.+||+.
T Consensus 121 ~~NPv~ 126 (175)
T PF14580_consen 121 EGNPVC 126 (175)
T ss_dssp TT-GGG
T ss_pred cCCccc
Confidence 666653
No 22
>KOG0472|consensus
Probab=99.47 E-value=6e-16 Score=150.87 Aligned_cols=193 Identities=26% Similarity=0.323 Sum_probs=134.5
Q ss_pred eEEcCCCCCCcCCCCCCc--cCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCC
Q psy15407 98 RVDCSQRGLKEIPKDIPL--YTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCP 175 (604)
Q Consensus 98 ~l~cs~~~L~~iP~~l~~--~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~ 175 (604)
.++.++|++.++|..+.. .++.|+++.|++..++++ |+.+..|..|+..+|+|+.++++. ..+.+|..|++.+|.
T Consensus 95 ~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~el~~~--i~~~~~l~dl~~~~N~i~slp~~~-~~~~~l~~l~~~~n~ 171 (565)
T KOG0472|consen 95 SLNVSHNKLSELPEQIGSLISLVKLDCSSNELKELPDS--IGRLLDLEDLDATNNQISSLPEDM-VNLSKLSKLDLEGNK 171 (565)
T ss_pred HhhcccchHhhccHHHhhhhhhhhhhccccceeecCch--HHHHhhhhhhhccccccccCchHH-HHHHHHHHhhccccc
Confidence 467788888888877643 446778888888888764 777778888888888888776643 345556666666654
Q ss_pred CCcc-------ccccEEEccCCccc--------------cccccccceeeeeeccccCCccccceeecCCCCceeeccCC
Q psy15407 176 PKCT-------CTVRVLFYDGRAGE--------------CYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNF 234 (604)
Q Consensus 176 ~~~~-------~~l~~l~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~ 234 (604)
...+ ..++.++...+..+ +++..+.+. .++.|.+. ..|.+|+++.|+|..++..
T Consensus 172 l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~---~lPef~gc--s~L~Elh~g~N~i~~lpae 246 (565)
T KOG0472|consen 172 LKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR---FLPEFPGC--SLLKELHVGENQIEMLPAE 246 (565)
T ss_pred hhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc---cCCCCCcc--HHHHHHHhcccHHHhhHHH
Confidence 3322 12333333322221 111111111 11222221 2678889999999999998
Q ss_pred CCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCcc
Q psy15407 235 TFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 235 ~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~ 301 (604)
...++++|..|||..|+|+++| +.+--|++|..||||+|.|+.+|.. +++| .|+.|.|.|||+.
T Consensus 247 ~~~~L~~l~vLDLRdNklke~P-de~clLrsL~rLDlSNN~is~Lp~s-Lgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 247 HLKHLNSLLVLDLRDNKLKEVP-DEICLLRSLERLDLSNNDISSLPYS-LGNL-HLKFLALEGNPLR 310 (565)
T ss_pred HhcccccceeeeccccccccCc-hHHHHhhhhhhhcccCCccccCCcc-cccc-eeeehhhcCCchH
Confidence 8899999999999999999995 4556689999999999999999984 7888 8999999999986
No 23
>KOG1214|consensus
Probab=99.46 E-value=8.6e-13 Score=137.94 Aligned_cols=188 Identities=27% Similarity=0.736 Sum_probs=135.5
Q ss_pred CCCCCeeeeCCCCceEeeCCCCCcC--CCCCcCCCcCCC--CCCCCCcEEEeCCCCeEEecCCCCC--C--CCcc-----
Q psy15407 405 CRNSGTCKLLEEGRFNCECAPGYTG--DRCEINIDDCLS--HKCENNATCVDLIQAYECRCAPGFQ--G--EFCQ----- 471 (604)
Q Consensus 405 C~~~~~C~~~~~~~~~C~C~~g~~g--~~C~~~~~~C~~--~~C~~~~~C~~~~~~~~C~C~~g~~--g--~~C~----- 471 (604)
|.-++.|...+.-.|.|.|..||.| ..|. ++++|+. ..|..++.|++.+++|+|.|..||. + ..|-
T Consensus 702 cdt~a~C~pg~~~~~tcecs~g~~gdgr~c~-d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~p 780 (1289)
T KOG1214|consen 702 CDTTARCHPGTGVDYTCECSSGYQGDGRNCV-DENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPP 780 (1289)
T ss_pred cCCCccccCCCCcceEEEEeeccCCCCCCCC-ChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCC
Confidence 4455677766667899999999986 4674 7888885 5699999999999999999999986 3 3453
Q ss_pred cCCCcCCCCCCCCCCCCce--eec-CCCeEEecCCCCcCC--cCcccCCCCCCCCCCCCCEEeeCCCCeEeeeCCCCccC
Q psy15407 472 TKTPFCAGEYNPCRNGARC--LDH-FSHYTCECTPGFSGV--NCTVNVDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGK 546 (604)
Q Consensus 472 ~~~~~C~~~~~~C~~~~~C--~~~-~~~~~C~C~~g~~g~--~c~~~~~~C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~ 546 (604)
...+.|....+.|...+.| +.. .++|.|.|.|||.|+ .|. ++|+|.++.|...+.|++++|++.|.|.+||.|+
T Consensus 781 ap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~c~-dvDeC~psrChp~A~CyntpgsfsC~C~pGy~GD 859 (1289)
T KOG1214|consen 781 APANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQCT-DVDECSPSRCHPAATCYNTPGSFSCRCQPGYYGD 859 (1289)
T ss_pred CCCCccccCccccCcCCceEEEecCCceEEEeecCCccCCccccc-cccccCccccCCCceEecCCCcceeecccCccCC
Confidence 2345677777788766654 443 356999999999865 454 7799999999999999999999999999999977
Q ss_pred CCCcCcccccCCCCCCCCCC-----CCCCCCc----eeCCCCCCCeeeecCCCCcC---CCCCCCcc
Q psy15407 547 FCEIAPFVAMMYPQTSPCQH-----HDCKNGI----CFQPQGSNDYLCKCAPGYSG---KESLLQQT 601 (604)
Q Consensus 547 ~C~~~~~~~~~~~~~~~C~~-----~~C~~g~----C~~~~g~~~~~C~C~~G~~G---~~C~~~~~ 601 (604)
.-...+. .....+|+. ..|+..+ |+++ ..|.|.|.++=.| .+|.+...
T Consensus 860 Gf~CVP~----~~~~T~C~~er~hpl~chg~t~~~~~~Dp---~~~e~p~~~~ppG~~~~~c~~~~~ 919 (1289)
T KOG1214|consen 860 GFQCVPD----TSSLTPCEQERFHPLQCHGSTGFCWCVDP---DGHEVPGTQTPPGSTPPHCGPSPE 919 (1289)
T ss_pred CceecCC----CccCCccccccccceeeccccceeEeeCC---CcccCCCCCCCCCCCCCCCCCccc
Confidence 5332211 112345542 2254433 3443 4578888777666 56665544
No 24
>KOG0618|consensus
Probab=99.41 E-value=2.4e-15 Score=160.77 Aligned_cols=82 Identities=29% Similarity=0.375 Sum_probs=68.4
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeecc
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIG 296 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 296 (604)
+|+.|+|++|+|..++...+.+|+.|++|+||+|+|+.|+ +....+..|++|...+|+|..+|+ +..++.|+.|||+
T Consensus 384 hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp-~tva~~~~L~tL~ahsN~l~~fPe--~~~l~qL~~lDlS 460 (1081)
T KOG0618|consen 384 HLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLP-DTVANLGRLHTLRAHSNQLLSFPE--LAQLPQLKVLDLS 460 (1081)
T ss_pred ceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhh-HHHHhhhhhHHHhhcCCceeechh--hhhcCcceEEecc
Confidence 7888888888888888888888888888888888888885 777788888888888888888883 7788888889988
Q ss_pred CCCcc
Q psy15407 297 GNPLY 301 (604)
Q Consensus 297 ~Npl~ 301 (604)
.|.+.
T Consensus 461 ~N~L~ 465 (1081)
T KOG0618|consen 461 CNNLS 465 (1081)
T ss_pred cchhh
Confidence 88775
No 25
>KOG0618|consensus
Probab=99.41 E-value=3.5e-15 Score=159.57 Aligned_cols=198 Identities=21% Similarity=0.199 Sum_probs=103.0
Q ss_pred CeEEcCCCCCCcCCCCC--CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCC
Q psy15407 97 TRVDCSQRGLKEIPKDI--PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYC 174 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~l--~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~ 174 (604)
+.+|+++++|+.+|+.+ ..+++.|.+.+|+|..++.. ...+++|+.|.+.+|.|+.|++ ...++..|++|+|..|
T Consensus 244 ~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~~lp~r--i~~~~~L~~l~~~~nel~yip~-~le~~~sL~tLdL~~N 320 (1081)
T KOG0618|consen 244 QYLDISHNNLSNLPEWIGACANLEALNANHNRLVALPLR--ISRITSLVSLSAAYNELEYIPP-FLEGLKSLRTLDLQSN 320 (1081)
T ss_pred eeeecchhhhhcchHHHHhcccceEecccchhHHhhHHH--HhhhhhHHHHHhhhhhhhhCCC-cccccceeeeeeehhc
Confidence 56788888888888665 35667777777777766543 3444555555555555555443 1233444444444444
Q ss_pred CCCccccccE--EEc-------c---------------CCccccccccccce------------------eeeeeccccC
Q psy15407 175 PPKCTCTVRV--LFY-------D---------------GRAGECYIAVELFS------------------SRIRVSYYVG 212 (604)
Q Consensus 175 ~~~~~~~l~~--l~~-------~---------------~~~~~~~~~~~~~~------------------~~~~~~~~~~ 212 (604)
.+..++.+.. +.. + ..+.++++..|.+. +.+.+..|+.
T Consensus 321 ~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpa 400 (1081)
T KOG0618|consen 321 NLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPA 400 (1081)
T ss_pred cccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCH
Confidence 3222221000 000 0 00011111111111 0011111111
Q ss_pred C---ccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCccc
Q psy15407 213 N---YPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHA 289 (604)
Q Consensus 213 ~---~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~ 289 (604)
. ....|+.|+||+|+++.|+ .....+..|++|....|+|..+| .+..++.|+.|||+.|+|+.+.-..-...++
T Consensus 401 s~~~kle~LeeL~LSGNkL~~Lp-~tva~~~~L~tL~ahsN~l~~fP--e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~ 477 (1081)
T KOG0618|consen 401 SKLRKLEELEELNLSGNKLTTLP-DTVANLGRLHTLRAHSNQLLSFP--ELAQLPQLKVLDLSCNNLSEVTLPEALPSPN 477 (1081)
T ss_pred HHHhchHHhHHHhcccchhhhhh-HHHHhhhhhHHHhhcCCceeech--hhhhcCcceEEecccchhhhhhhhhhCCCcc
Confidence 0 0124666777777777776 35666777777777777777764 4666777777777777776443322222366
Q ss_pred ceeeeccCCCc
Q psy15407 290 ITHLAIGGNPL 300 (604)
Q Consensus 290 L~~L~L~~Npl 300 (604)
|++|||+||+|
T Consensus 478 LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 478 LKYLDLSGNTR 488 (1081)
T ss_pred cceeeccCCcc
Confidence 77777777775
No 26
>KOG1214|consensus
Probab=99.39 E-value=9.2e-12 Score=130.39 Aligned_cols=176 Identities=28% Similarity=0.752 Sum_probs=123.1
Q ss_pred CCCCCCeeecCCCCceeeeCCCCCcC--CCCcccCCCCCCC--CCCCCCeeeeCCCCceEeeCCCCCc--C--CCCCc--
Q psy15407 365 PCTNQGVCEPLPERQYQCRCTPGYHG--QHCEFMIDACYGN--PCRNSGTCKLLEEGRFNCECAPGYT--G--DRCEI-- 434 (604)
Q Consensus 365 ~C~~~g~C~~~~~~~~~C~C~~g~~G--~~c~~~~~~C~~~--~C~~~~~C~~~~~~~~~C~C~~g~~--g--~~C~~-- 434 (604)
-|..+..|...+...|+|.|..||.| ..|. ++++|... .|..++.|++ ..++|+|.|..||. + ..|-.
T Consensus 701 ~cdt~a~C~pg~~~~~tcecs~g~~gdgr~c~-d~~eca~~~~~CGp~s~Cin-~pg~~rceC~~gy~F~dd~~tCV~i~ 778 (1289)
T KOG1214|consen 701 MCDTTARCHPGTGVDYTCECSSGYQGDGRNCV-DENECATGFHRCGPNSVCIN-LPGSYRCECRSGYEFADDRHTCVLIT 778 (1289)
T ss_pred ccCCCccccCCCCcceEEEEeeccCCCCCCCC-ChhhhccCCCCCCCCceeec-CCCceeEEEeecceeccCCcceEEec
Confidence 35666788877777899999999974 5776 56788653 4999999988 47899999999875 3 34542
Q ss_pred ---CCCcCCC--CCCCCCc--EEEeC-CCCeEEecCCCCCCC--CcccCCCcCCCCCCCCCCCCceeecCCCeEEecCCC
Q psy15407 435 ---NIDDCLS--HKCENNA--TCVDL-IQAYECRCAPGFQGE--FCQTKTPFCAGEYNPCRNGARCLDHFSHYTCECTPG 504 (604)
Q Consensus 435 ---~~~~C~~--~~C~~~~--~C~~~-~~~~~C~C~~g~~g~--~C~~~~~~C~~~~~~C~~~~~C~~~~~~~~C~C~~g 504 (604)
.++.|.. +.|.-.+ .|+.. .+.|.|.|.+||.|+ .|. +.++|.+ +.|...+.|+++++++.|.|.+|
T Consensus 779 ~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~c~-dvDeC~p--srChp~A~CyntpgsfsC~C~pG 855 (1289)
T KOG1214|consen 779 PPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQCT-DVDECSP--SRCHPAATCYNTPGSFSCRCQPG 855 (1289)
T ss_pred CCCCCCccccCccccCcCCceEEEecCCceEEEeecCCccCCccccc-cccccCc--cccCCCceEecCCCcceeecccC
Confidence 3344543 3455444 45543 456999999999976 564 5689975 58999999999999999999999
Q ss_pred CcCCc--Cccc---CCCCCC---CC--CCCCCEE---eeCCCCeEeeeCCCCccC
Q psy15407 505 FSGVN--CTVN---VDDCVN---HM--CQNGGTC---VDGINDYTCKCEGDFVGK 546 (604)
Q Consensus 505 ~~g~~--c~~~---~~~C~~---~~--C~~~~~C---~~~~~~y~C~C~~G~~G~ 546 (604)
|.|+. |-.+ ...|.. || |...+.| ++ +.+|.|.|.++--|.
T Consensus 856 y~GDGf~CVP~~~~~T~C~~er~hpl~chg~t~~~~~~D-p~~~e~p~~~~ppG~ 909 (1289)
T KOG1214|consen 856 YYGDGFQCVPDTSSLTPCEQERFHPLQCHGSTGFCWCVD-PDGHEVPGTQTPPGS 909 (1289)
T ss_pred ccCCCceecCCCccCCccccccccceeeccccceeEeeC-CCcccCCCCCCCCCC
Confidence 99754 4322 122332 22 4444433 33 456888887766664
No 27
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.39 E-value=1.5e-13 Score=124.66 Aligned_cols=140 Identities=31% Similarity=0.392 Sum_probs=55.1
Q ss_pred EEcCCCCCCcCCCCC-CccCcEEecCCCcceeecCCCccC-CCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCCC
Q psy15407 99 VDCSQRGLKEIPKDI-PLYTTELILNDNEIGKIKSDGLFG-RLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPP 176 (604)
Q Consensus 99 l~cs~~~L~~iP~~l-~~~~~~L~L~~N~i~~i~~~~~f~-~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~~ 176 (604)
|.++.+.|..+|... +...++|+|++|.|+.|.. ++ .|.+|+.|+|++|.|+.|+. |..+.
T Consensus 2 ~~lt~~~i~~~~~~~n~~~~~~L~L~~n~I~~Ie~---L~~~l~~L~~L~Ls~N~I~~l~~--l~~L~------------ 64 (175)
T PF14580_consen 2 VRLTANMIEQIAQYNNPVKLRELNLRGNQISTIEN---LGATLDKLEVLDLSNNQITKLEG--LPGLP------------ 64 (175)
T ss_dssp ----------------------------------S-----TT-TT--EEE-TTS--S--TT------T------------
T ss_pred ccccccccccccccccccccccccccccccccccc---hhhhhcCCCEEECCCCCCccccC--ccChh------------
Confidence 566777788888755 5667999999999999964 55 68999999999999999863 44332
Q ss_pred CccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeee
Q psy15407 177 KCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCID 256 (604)
Q Consensus 177 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~ 256 (604)
.|+.|+|++|+|+.+.......+++|++|+|++|+|..+.
T Consensus 65 ----------------------------------------~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~N~I~~l~ 104 (175)
T PF14580_consen 65 ----------------------------------------RLKTLDLSNNRISSISEGLDKNLPNLQELYLSNNKISDLN 104 (175)
T ss_dssp ----------------------------------------T--EEE--SS---S-CHHHHHH-TT--EEE-TTS---SCC
T ss_pred ----------------------------------------hhhhcccCCCCCCccccchHHhCCcCCEEECcCCcCCChH
Confidence 8889999999999996533346899999999999998875
Q ss_pred c-cccCCCCcccEEEccCCccccCCc---ccccCcccceeeec
Q psy15407 257 R-DALAGLKSLRIISLHGNDISMIPE---GAFADLHAITHLAI 295 (604)
Q Consensus 257 ~-~~f~~l~~L~~L~Ls~N~l~~i~~---~~f~~l~~L~~L~L 295 (604)
. ..++.+++|+.|+|.+|.++..+. .++..+++|+.||-
T Consensus 105 ~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 105 ELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp CCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred HhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 4 567789999999999999987654 24566788887764
No 28
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.35 E-value=6.9e-13 Score=146.16 Aligned_cols=173 Identities=21% Similarity=0.208 Sum_probs=104.8
Q ss_pred EEcCCCCCCcCCCCCCccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCCCCc
Q psy15407 99 VDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKC 178 (604)
Q Consensus 99 l~cs~~~L~~iP~~l~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~~~~ 178 (604)
|++++|+|+.||. ++..++.|+|++|+|+.|+.. + .+|+.|+|++|+|+.|+. + ..+|+.|+|++|.+..
T Consensus 287 L~Ls~N~Lt~LP~-~p~~L~~LdLS~N~L~~Lp~l--p---~~L~~L~Ls~N~L~~LP~--l--p~~Lq~LdLS~N~Ls~ 356 (788)
T PRK15387 287 LWIFGNQLTSLPV-LPPGLQELSVSDNQLASLPAL--P---SELCKLWAYNNQLTSLPT--L--PSGLQELSVSDNQLAS 356 (788)
T ss_pred EECcCCccccccc-cccccceeECCCCccccCCCC--c---ccccccccccCccccccc--c--ccccceEecCCCccCC
Confidence 4444444444443 233444555555555444321 1 234444455555544432 1 1355666666665544
Q ss_pred cccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeecc
Q psy15407 179 TCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRD 258 (604)
Q Consensus 179 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~ 258 (604)
++.+. .++..+.+..+.+. .++. .+.+|+.|+|++|+|+.++.. .++|+.|+|++|+|+.|+.
T Consensus 357 LP~lp-----~~L~~L~Ls~N~L~------~LP~-l~~~L~~LdLs~N~Lt~LP~l----~s~L~~LdLS~N~LssIP~- 419 (788)
T PRK15387 357 LPTLP-----SELYKLWAYNNRLT------SLPA-LPSGLKELIVSGNRLTSLPVL----PSELKELMVSGNRLTSLPM- 419 (788)
T ss_pred CCCCC-----cccceehhhccccc------cCcc-cccccceEEecCCcccCCCCc----ccCCCEEEccCCcCCCCCc-
Confidence 33211 11112222222222 1211 234799999999999988753 3689999999999999854
Q ss_pred ccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCccc
Q psy15407 259 ALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYC 302 (604)
Q Consensus 259 ~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~C 302 (604)
. ..+|+.|+|++|+|+.||.. |..+++|+.|+|++|+|.-
T Consensus 420 l---~~~L~~L~Ls~NqLt~LP~s-l~~L~~L~~LdLs~N~Ls~ 459 (788)
T PRK15387 420 L---PSGLLSLSVYRNQLTRLPES-LIHLSSETTVNLEGNPLSE 459 (788)
T ss_pred c---hhhhhhhhhccCcccccChH-HhhccCCCeEECCCCCCCc
Confidence 2 35788999999999999875 7789999999999999974
No 29
>KOG1259|consensus
Probab=99.32 E-value=1.5e-13 Score=129.52 Aligned_cols=126 Identities=28% Similarity=0.341 Sum_probs=104.2
Q ss_pred cEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCCCCccccccEEEccCCccccccc
Q psy15407 118 TELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYIA 197 (604)
Q Consensus 118 ~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~~~~~~~l~~l~~~~~~~~~~~~ 197 (604)
++|+|++|.|+.|... ..-+|+++.|+||+|.|..+..- +.|+
T Consensus 287 telDLS~N~I~~iDES--vKL~Pkir~L~lS~N~i~~v~nL--a~L~--------------------------------- 329 (490)
T KOG1259|consen 287 TELDLSGNLITQIDES--VKLAPKLRRLILSQNRIRTVQNL--AELP--------------------------------- 329 (490)
T ss_pred hhccccccchhhhhhh--hhhccceeEEeccccceeeehhh--hhcc---------------------------------
Confidence 7889999999988764 67788999999999999888653 2232
Q ss_pred cccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccc
Q psy15407 198 VELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDIS 277 (604)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~ 277 (604)
+|+.||||+|.++.+.. .-..|.+++.|.|+.|.|..+ ..+..|-+|..||+++|+|.
T Consensus 330 -------------------~L~~LDLS~N~Ls~~~G-wh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 330 -------------------QLQLLDLSGNLLAECVG-WHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred -------------------cceEeecccchhHhhhh-hHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchh
Confidence 88899999999998865 344688899999999999988 35677889999999999999
Q ss_pred cCCc-ccccCcccceeeeccCCCccc
Q psy15407 278 MIPE-GAFADLHAITHLAIGGNPLYC 302 (604)
Q Consensus 278 ~i~~-~~f~~l~~L~~L~L~~Npl~C 302 (604)
.+.+ ..++.|+-|++|.|.+||+.=
T Consensus 388 ~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 388 ELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hHHHhcccccccHHHHHhhcCCCccc
Confidence 7765 457889999999999999863
No 30
>KOG0532|consensus
Probab=99.31 E-value=3.1e-14 Score=144.89 Aligned_cols=168 Identities=24% Similarity=0.291 Sum_probs=119.6
Q ss_pred CeEEcCCCCCCcCCCCC--CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCC
Q psy15407 97 TRVDCSQRGLKEIPKDI--PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYC 174 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~l--~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~ 174 (604)
+.+|++.|++.+||..+ +..+..|.|..|.|..|+.. +.+|..|++|||+.|+|+.++..++. | -|+.|.+++|
T Consensus 78 ~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~--i~~L~~lt~l~ls~NqlS~lp~~lC~-l-pLkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEA--ICNLEALTFLDLSSNQLSHLPDGLCD-L-PLKVLIVSNN 153 (722)
T ss_pred hhhhccccccccCchHHHHHHHHHHHHHHhccceecchh--hhhhhHHHHhhhccchhhcCChhhhc-C-cceeEEEecC
Confidence 35666667777666654 34456666777777666653 66677777777777777776665542 1 1222322222
Q ss_pred CCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCccee
Q psy15407 175 PPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQC 254 (604)
Q Consensus 175 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~ 254 (604)
.+. .+..-.+ ...+|..||.+.|.|..+++ .+..|.+|+.|.+..|++..
T Consensus 154 kl~----------------------------~lp~~ig-~~~tl~~ld~s~nei~slps-ql~~l~slr~l~vrRn~l~~ 203 (722)
T KOG0532|consen 154 KLT----------------------------SLPEEIG-LLPTLAHLDVSKNEIQSLPS-QLGYLTSLRDLNVRRNHLED 203 (722)
T ss_pred ccc----------------------------cCCcccc-cchhHHHhhhhhhhhhhchH-HhhhHHHHHHHHHhhhhhhh
Confidence 211 1111122 12388899999999999987 68889999999999999999
Q ss_pred eeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCcc
Q psy15407 255 IDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 255 i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~ 301 (604)
++++.. .| .|..||++.|+|+.||.. |..|+.|++|-|.+|||.
T Consensus 204 lp~El~-~L-pLi~lDfScNkis~iPv~-fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 204 LPEELC-SL-PLIRLDFSCNKISYLPVD-FRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred CCHHHh-CC-ceeeeecccCceeecchh-hhhhhhheeeeeccCCCC
Confidence 976544 44 689999999999999985 899999999999999997
No 31
>KOG1225|consensus
Probab=99.28 E-value=2.4e-11 Score=126.32 Aligned_cols=131 Identities=38% Similarity=1.007 Sum_probs=103.3
Q ss_pred eeeCCCCCcCCCCcccCCCCCCCCCCCCCeeeeCCCCceEeeCCCCCcCCCCCcCCCcCCCCCCCCCcEEEeCCCCeEEe
Q psy15407 381 QCRCTPGYHGQHCEFMIDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEINIDDCLSHKCENNATCVDLIQAYECR 460 (604)
Q Consensus 381 ~C~C~~g~~G~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~ 460 (604)
.|.|+.+|+|..|+. -.|..+ |.+.+.|... +|.|++||+|..|.. -.|... |+.++.|++. .|+
T Consensus 235 ic~c~~~~~g~~c~~--~~C~~~-c~~~g~c~~G-----~CIC~~Gf~G~dC~e--~~Cp~~-cs~~g~~~~g----~Ci 299 (525)
T KOG1225|consen 235 ICECPEGYFGPLCST--IYCPGG-CTGRGQCVEG-----RCICPPGFTGDDCDE--LVCPVD-CSGGGVCVDG----ECI 299 (525)
T ss_pred eeecCCceeCCcccc--ccCCCC-CcccceEeCC-----eEeCCCCCcCCCCCc--ccCCcc-cCCCceecCC----Eee
Confidence 899999999999983 345443 6667888642 699999999999963 456555 8888888653 799
Q ss_pred cCCCCCCCCcccCCCcCCCCCCCCCCCCceeecCCCeEEecCCCCcCCcCcccCCCCCCCCCCCCCEEeeCCCCeEeeeC
Q psy15407 461 CAPGFQGEFCQTKTPFCAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCTVNVDDCVNHMCQNGGTCVDGINDYTCKCE 540 (604)
Q Consensus 461 C~~g~~g~~C~~~~~~C~~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~c~~~~~~C~~~~C~~~~~C~~~~~~y~C~C~ 540 (604)
|++||+|..|+... |. ..|.++|.|++ .+|.|.+||+|..|... .|.+++.|++. |.|.
T Consensus 300 C~~g~~G~dCs~~~--cp---adC~g~G~Ci~----G~C~C~~Gy~G~~C~~~-------~C~~~g~cv~g-----C~C~ 358 (525)
T KOG1225|consen 300 CNPGYSGKDCSIRR--CP---ADCSGHGKCID----GECLCDEGYTGELCIQR-------ACSGGGQCVNG-----CKCK 358 (525)
T ss_pred cCCCcccccccccc--CC---ccCCCCCcccC----CceEeCCCCcCCccccc-------ccCCCceeccC-----ceec
Confidence 99999999997544 54 47999999983 36999999999999743 38888999863 9999
Q ss_pred CCCccCC
Q psy15407 541 GDFVGKF 547 (604)
Q Consensus 541 ~G~~G~~ 547 (604)
.||.|.+
T Consensus 359 ~Gw~G~d 365 (525)
T KOG1225|consen 359 KGWRGPD 365 (525)
T ss_pred cCccCCC
Confidence 9999988
No 32
>KOG1225|consensus
Probab=99.23 E-value=4.3e-11 Score=124.48 Aligned_cols=130 Identities=37% Similarity=1.038 Sum_probs=102.3
Q ss_pred EeeCCCCCcCCCCCcCCCcCCCCCCCCCcEEEeCCCCeEEecCCCCCCCCcccCCCcCCCCCCCCCCCCceeecCCCeEE
Q psy15407 420 NCECAPGYTGDRCEINIDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQTKTPFCAGEYNPCRNGARCLDHFSHYTC 499 (604)
Q Consensus 420 ~C~C~~g~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~~~~~~C~~~~~~C~~~~~C~~~~~~~~C 499 (604)
.|.|+.+|+|..|. ...| +..|.+++.|++. +|+|++||+|..|.. ..|.. .|+.++.|++. .|
T Consensus 235 ic~c~~~~~g~~c~--~~~C-~~~c~~~g~c~~G----~CIC~~Gf~G~dC~e--~~Cp~---~cs~~g~~~~g----~C 298 (525)
T KOG1225|consen 235 ICECPEGYFGPLCS--TIYC-PGGCTGRGQCVEG----RCICPPGFTGDDCDE--LVCPV---DCSGGGVCVDG----EC 298 (525)
T ss_pred eeecCCceeCCccc--cccC-CCCCcccceEeCC----eEeCCCCCcCCCCCc--ccCCc---ccCCCceecCC----Ee
Confidence 79999999999997 2344 3456777888764 799999999999965 34643 48888888753 79
Q ss_pred ecCCCCcCCcCcccCCCCCCCCCCCCCEEeeCCCCeEeeeCCCCccCCCCcCcccccCCCCCCCCCCCCCCCCc-eeCCC
Q psy15407 500 ECTPGFSGVNCTVNVDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGI-CFQPQ 578 (604)
Q Consensus 500 ~C~~g~~g~~c~~~~~~C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C~~~~C~~g~-C~~~~ 578 (604)
+|++||+|..|++.. |. .+|.++|.|++. +|.|.+||+|..|+.. .|.++. |++
T Consensus 299 iC~~g~~G~dCs~~~--cp-adC~g~G~Ci~G----~C~C~~Gy~G~~C~~~----------------~C~~~g~cv~-- 353 (525)
T KOG1225|consen 299 ICNPGYSGKDCSIRR--CP-ADCSGHGKCIDG----ECLCDEGYTGELCIQR----------------ACSGGGQCVN-- 353 (525)
T ss_pred ecCCCcccccccccc--CC-ccCCCCCcccCC----ceEeCCCCcCCccccc----------------ccCCCceecc--
Confidence 999999999997543 55 479999999954 8999999999999852 255555 653
Q ss_pred CCCCeeeecCCCCcCCC
Q psy15407 579 GSNDYLCKCAPGYSGKE 595 (604)
Q Consensus 579 g~~~~~C~C~~G~~G~~ 595 (604)
+ |.|..||.|.+
T Consensus 354 ---g--C~C~~Gw~G~d 365 (525)
T KOG1225|consen 354 ---G--CKCKKGWRGPD 365 (525)
T ss_pred ---C--ceeccCccCCC
Confidence 2 89999999988
No 33
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.21 E-value=1.7e-11 Score=91.69 Aligned_cols=60 Identities=37% Similarity=0.465 Sum_probs=38.8
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCcc
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDI 276 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l 276 (604)
+|++|+|++|+|+.+++.+|.++++|++|+|++|+|+.+++.+|.++++|++|+|++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666666666666666666666666666666666666666666666666654
No 34
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.20 E-value=1.4e-11 Score=92.05 Aligned_cols=61 Identities=34% Similarity=0.525 Sum_probs=59.1
Q ss_pred CCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCc
Q psy15407 240 SKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPL 300 (604)
Q Consensus 240 ~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl 300 (604)
++|++|+|++|+|+.|++.+|.++++|++|+|++|+|+.|++++|..+++|++|+|++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999999999999999999999999999999999999999999999999985
No 35
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.16 E-value=1.8e-10 Score=136.36 Aligned_cols=195 Identities=16% Similarity=0.226 Sum_probs=116.4
Q ss_pred CeEEcCCCCCCcCCCCC-CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCC-cceecCCCcCCCcccCCcCCCCCC
Q psy15407 97 TRVDCSQRGLKEIPKDI-PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRN-QVTGIEDNAFEGENDQGCLGDNYC 174 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~l-~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N-~i~~i~~~~f~~l~~L~~L~l~~~ 174 (604)
+.|++.++.++.+|..+ +.++++|+|.+|+|..++.. +..+++|+.|+|+++ .+..++. +..+++|+.|+|++|
T Consensus 592 r~L~~~~~~l~~lP~~f~~~~L~~L~L~~s~l~~L~~~--~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c 667 (1153)
T PLN03210 592 RLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDG--VHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDC 667 (1153)
T ss_pred EEEEecCCCCCCCCCcCCccCCcEEECcCccccccccc--cccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCC
Confidence 56778888888888877 67888899999988888753 678888888888876 4666653 666778888888775
Q ss_pred C--------CCccccccEEEccCCcccccccccc-ceee--------eeeccccCCccccceeecCCCCceeeccCCC--
Q psy15407 175 P--------PKCTCTVRVLFYDGRAGECYIAVEL-FSSR--------IRVSYYVGNYPVSTMYRDLSNNQIGFLSNFT-- 235 (604)
Q Consensus 175 ~--------~~~~~~l~~l~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~-- 235 (604)
. +..+..|..+.+........++... +.++ ..+..++ ..+.+|++|+|++|.|+.++...
T Consensus 668 ~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p-~~~~nL~~L~L~~n~i~~lP~~~~l 746 (1153)
T PLN03210 668 SSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFP-DISTNISWLDLDETAIEEFPSNLRL 746 (1153)
T ss_pred CCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccc-cccCCcCeeecCCCccccccccccc
Confidence 3 1233445555555322111111110 0000 0111111 12236777777777776665421
Q ss_pred ---------------------------CCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCC-ccccCCcccccCc
Q psy15407 236 ---------------------------FSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGN-DISMIPEGAFADL 287 (604)
Q Consensus 236 ---------------------------f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l 287 (604)
+...++|+.|+|++|......|..|..+++|+.|+|+++ .|..+|... .+
T Consensus 747 ~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~--~L 824 (1153)
T PLN03210 747 ENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI--NL 824 (1153)
T ss_pred cccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC--Cc
Confidence 011235666666666433333555777777777777764 466666543 46
Q ss_pred ccceeeeccCC
Q psy15407 288 HAITHLAIGGN 298 (604)
Q Consensus 288 ~~L~~L~L~~N 298 (604)
++|+.|+|+++
T Consensus 825 ~sL~~L~Ls~c 835 (1153)
T PLN03210 825 ESLESLDLSGC 835 (1153)
T ss_pred cccCEEECCCC
Confidence 66666666664
No 36
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.12 E-value=4.4e-11 Score=126.03 Aligned_cols=81 Identities=36% Similarity=0.452 Sum_probs=62.1
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeecc
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIG 296 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 296 (604)
.|++|.+++|++..++. .+..+.+|..|.+.+|++..+ +..+..+++|+.|++++|+|+.++. +..+.+|+.|+++
T Consensus 210 ~L~~l~~~~N~~~~~~~-~~~~~~~l~~l~l~~n~~~~~-~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s 285 (394)
T COG4886 210 ALEELDLSNNSIIELLS-SLSNLKNLSGLELSNNKLEDL-PESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLS 285 (394)
T ss_pred hhhhhhhcCCcceecch-hhhhcccccccccCCceeeec-cchhccccccceecccccccccccc--ccccCccCEEecc
Confidence 57788888886444443 466777888888888888776 4567777888888888888888887 7778888888888
Q ss_pred CCCcc
Q psy15407 297 GNPLY 301 (604)
Q Consensus 297 ~Npl~ 301 (604)
+|.+.
T Consensus 286 ~n~~~ 290 (394)
T COG4886 286 GNSLS 290 (394)
T ss_pred Ccccc
Confidence 88764
No 37
>KOG1259|consensus
Probab=99.10 E-value=9.6e-12 Score=117.42 Aligned_cols=128 Identities=26% Similarity=0.317 Sum_probs=106.2
Q ss_pred CeEEcCCCCCCcCCCCC--CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCC
Q psy15407 97 TRVDCSQRGLKEIPKDI--PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYC 174 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~l--~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~ 174 (604)
++||+|+|.|+.|-+.+ .+.++.|+|++|.|..+.. +..|++|+.||||+|.++.+..-.. .|
T Consensus 287 telDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~n---La~L~~L~~LDLS~N~Ls~~~Gwh~-KL----------- 351 (490)
T KOG1259|consen 287 TELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQN---LAELPQLQLLDLSGNLLAECVGWHL-KL----------- 351 (490)
T ss_pred hhccccccchhhhhhhhhhccceeEEeccccceeeehh---hhhcccceEeecccchhHhhhhhHh-hh-----------
Confidence 67999999999998764 6778999999999999964 8899999999999999988754111 11
Q ss_pred CCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCccee
Q psy15407 175 PPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQC 254 (604)
Q Consensus 175 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~ 254 (604)
-+++.|.|+.|.|..+.. +..|-+|..|||++|+|..
T Consensus 352 -----------------------------------------GNIKtL~La~N~iE~LSG--L~KLYSLvnLDl~~N~Ie~ 388 (490)
T KOG1259|consen 352 -----------------------------------------GNIKTLKLAQNKIETLSG--LRKLYSLVNLDLSSNQIEE 388 (490)
T ss_pred -----------------------------------------cCEeeeehhhhhHhhhhh--hHhhhhheeccccccchhh
Confidence 167788899999888764 6778889999999999988
Q ss_pred eec-cccCCCCcccEEEccCCccccCCcc
Q psy15407 255 IDR-DALAGLKSLRIISLHGNDISMIPEG 282 (604)
Q Consensus 255 i~~-~~f~~l~~L~~L~Ls~N~l~~i~~~ 282 (604)
+.. ..++.|+-|++|.|.+|.|+.++..
T Consensus 389 ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 389 LDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred HHHhcccccccHHHHHhhcCCCccccchH
Confidence 753 5678899999999999999988763
No 38
>KOG3207|consensus
Probab=99.00 E-value=4.6e-11 Score=118.59 Aligned_cols=201 Identities=19% Similarity=0.147 Sum_probs=110.8
Q ss_pred eEEcCCCCCCcCCC--C--CCccCcEEecCCCcceeecCC-CccCCCCCCcEEeCCCCcceecCC-CcCCCcccCCcCCC
Q psy15407 98 RVDCSQRGLKEIPK--D--IPLYTTELILNDNEIGKIKSD-GLFGRLPNLIKLDLRRNQVTGIED-NAFEGENDQGCLGD 171 (604)
Q Consensus 98 ~l~cs~~~L~~iP~--~--l~~~~~~L~L~~N~i~~i~~~-~~f~~l~~L~~L~Ls~N~i~~i~~-~~f~~l~~L~~L~l 171 (604)
.|.+.+.....++. . ...+++.|+|+.|-|..+.+. .+...|++|+.|+|+.|++..... ..-..++.|+.|.|
T Consensus 125 ~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l 204 (505)
T KOG3207|consen 125 EISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVL 204 (505)
T ss_pred heeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEe
Confidence 34555555444442 1 234568888888887654321 224578888888888888765322 22224566777777
Q ss_pred CCCCCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccC-CCCCCCCCCCeEEecCC
Q psy15407 172 NYCPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSN-FTFSPLSKLSQLILSYN 250 (604)
Q Consensus 172 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~-~~f~~l~~L~~L~Ls~N 250 (604)
+.|.+..-.-...+..-..+..+++..|. ...........+..|+.|||++|++...+. .....|+.|..|+++.+
T Consensus 205 ~~CGls~k~V~~~~~~fPsl~~L~L~~N~---~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~t 281 (505)
T KOG3207|consen 205 NSCGLSWKDVQWILLTFPSLEVLYLEANE---IILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSST 281 (505)
T ss_pred ccCCCCHHHHHHHHHhCCcHHHhhhhccc---ccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhcccc
Confidence 77665422222222222222233332221 000111111223467777888877766653 24566777777888888
Q ss_pred cceeeecccc------CCCCcccEEEccCCccccCCc-ccccCcccceeeeccCCCcc
Q psy15407 251 KLQCIDRDAL------AGLKSLRIISLHGNDISMIPE-GAFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 251 ~l~~i~~~~f------~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~L~~Npl~ 301 (604)
.|.+|....- ..+++|+.|+++.|+|..++. +.+..+++|+.|.+..|++.
T Consensus 282 gi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 282 GIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred CcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 7777643222 445778888888888765553 22334555666666666664
No 39
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.98 E-value=3.8e-09 Score=125.24 Aligned_cols=195 Identities=14% Similarity=0.106 Sum_probs=110.1
Q ss_pred CCeEEcCCCCCCcCCCCC--CccCcEEecCCCc-ceeecCCCccCCCCCCcEEeCCCCc-ceecCCCcCCCcccCCcCCC
Q psy15407 96 GTRVDCSQRGLKEIPKDI--PLYTTELILNDNE-IGKIKSDGLFGRLPNLIKLDLRRNQ-VTGIEDNAFEGENDQGCLGD 171 (604)
Q Consensus 96 ~~~l~cs~~~L~~iP~~l--~~~~~~L~L~~N~-i~~i~~~~~f~~l~~L~~L~Ls~N~-i~~i~~~~f~~l~~L~~L~l 171 (604)
-..|+++++.|..+|.++ ...++.|+|+++. ++.+|. +..+++|++|+|++|. +..++ ..+..+.+|+.|++
T Consensus 613 L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~---ls~l~~Le~L~L~~c~~L~~lp-~si~~L~~L~~L~L 688 (1153)
T PLN03210 613 LVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPD---LSMATNLETLKLSDCSSLVELP-SSIQYLNKLEDLDM 688 (1153)
T ss_pred CcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCc---cccCCcccEEEecCCCCccccc-hhhhccCCCCEEeC
Confidence 467888888888888766 3566888888754 566653 6778888888887764 44443 45667777777777
Q ss_pred CCCC------C-CccccccEEEccCCc------------cccccccccceee---------e-----------------e
Q psy15407 172 NYCP------P-KCTCTVRVLFYDGRA------------GECYIAVELFSSR---------I-----------------R 206 (604)
Q Consensus 172 ~~~~------~-~~~~~l~~l~~~~~~------------~~~~~~~~~~~~~---------~-----------------~ 206 (604)
++|. . ..+.+|..+.+.+.. ..+.+..+.+... . .
T Consensus 689 ~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~ 768 (1153)
T PLN03210 689 SRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQP 768 (1153)
T ss_pred CCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeeecCCCccccccccccccccccccccccchhhccccccc
Confidence 6642 1 122334444443221 1111111110000 0 0
Q ss_pred eccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCC-cceeeeccccCCCCcccEEEccCCc-cccCCcccc
Q psy15407 207 VSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYN-KLQCIDRDALAGLKSLRIISLHGND-ISMIPEGAF 284 (604)
Q Consensus 207 ~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f 284 (604)
+..+....+.+|+.|+|++|....-.+..|.++++|+.|+|+++ .+..++... .+++|+.|+|+++. +..+|.
T Consensus 769 l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~--~L~sL~~L~Ls~c~~L~~~p~--- 843 (1153)
T PLN03210 769 LTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI--NLESLESLDLSGCSRLRTFPD--- 843 (1153)
T ss_pred cchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC--CccccCEEECCCCCccccccc---
Confidence 00001112347888999988654434456889999999999886 567765432 45666666666542 333332
Q ss_pred cCcccceeeeccCCCc
Q psy15407 285 ADLHAITHLAIGGNPL 300 (604)
Q Consensus 285 ~~l~~L~~L~L~~Npl 300 (604)
...+|+.|+|++|.+
T Consensus 844 -~~~nL~~L~Ls~n~i 858 (1153)
T PLN03210 844 -ISTNISDLNLSRTGI 858 (1153)
T ss_pred -cccccCEeECCCCCC
Confidence 123455555555544
No 40
>KOG3207|consensus
Probab=98.91 E-value=1.2e-10 Score=115.60 Aligned_cols=185 Identities=19% Similarity=0.142 Sum_probs=130.3
Q ss_pred ccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCC--CcCCCcccCCcCCCCCCCCCccccccEEEccCCcc
Q psy15407 115 LYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIED--NAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAG 192 (604)
Q Consensus 115 ~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~--~~f~~l~~L~~L~l~~~~~~~~~~l~~l~~~~~~~ 192 (604)
+.++++.|.+-.+..++..+....+++++.||||.|-|..+.+ .....|++|+.|.|+.|.+....+-..........
T Consensus 121 kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 121 KKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred HhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 4457888888888777654457889999999999999887654 34567899999999988655443322222222222
Q ss_pred ccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeec-cccCCCCcccEEEc
Q psy15407 193 ECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDR-DALAGLKSLRIISL 271 (604)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~L 271 (604)
.+.+..-.+. ...+......+| +|+.|+|+.|.+..+....+.-+..|++|+|++|.+...+. .....|+.|+.|++
T Consensus 201 ~L~l~~CGls-~k~V~~~~~~fP-sl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 201 QLVLNSCGLS-WKDVQWILLTFP-SLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred eEEeccCCCC-HHHHHHHHHhCC-cHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 2222222221 222222333445 89999999997666666667778899999999999988752 45677899999999
Q ss_pred cCCccccCCccc------ccCcccceeeeccCCCcc
Q psy15407 272 HGNDISMIPEGA------FADLHAITHLAIGGNPLY 301 (604)
Q Consensus 272 s~N~l~~i~~~~------f~~l~~L~~L~L~~Npl~ 301 (604)
+.+.|++|.... ...+++|+.|++..|++.
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 999999775432 256789999999999985
No 41
>KOG1859|consensus
Probab=98.89 E-value=2.4e-11 Score=127.24 Aligned_cols=128 Identities=25% Similarity=0.297 Sum_probs=97.8
Q ss_pred cEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCCCCccccccEEEccCCccccccc
Q psy15407 118 TELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYIA 197 (604)
Q Consensus 118 ~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~~~~~~~l~~l~~~~~~~~~~~~ 197 (604)
...+++.|.+..+... +.-|+.|+.|||++|+++.+. ++..+
T Consensus 167 ~~a~fsyN~L~~mD~S--Lqll~ale~LnLshNk~~~v~--~Lr~l---------------------------------- 208 (1096)
T KOG1859|consen 167 ATASFSYNRLVLMDES--LQLLPALESLNLSHNKFTKVD--NLRRL---------------------------------- 208 (1096)
T ss_pred hhhhcchhhHHhHHHH--HHHHHHhhhhccchhhhhhhH--HHHhc----------------------------------
Confidence 5567777777777543 677788888888888877765 23322
Q ss_pred cccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccc
Q psy15407 198 VELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDIS 277 (604)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~ 277 (604)
.+|++|||++|.+..++.....+.. |+.|.|++|.++.+. .+.+|++|+.|||++|-|.
T Consensus 209 ------------------~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~--gie~LksL~~LDlsyNll~ 267 (1096)
T KOG1859|consen 209 ------------------PKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR--GIENLKSLYGLDLSYNLLS 267 (1096)
T ss_pred ------------------ccccccccccchhccccccchhhhh-heeeeecccHHHhhh--hHHhhhhhhccchhHhhhh
Confidence 2788999999999998875555544 999999999999984 5788999999999999988
Q ss_pred cCCc-ccccCcccceeeeccCCCccccc
Q psy15407 278 MIPE-GAFADLHAITHLAIGGNPLYCDC 304 (604)
Q Consensus 278 ~i~~-~~f~~l~~L~~L~L~~Npl~CdC 304 (604)
...+ ..+..|..|+.|+|.|||+-|.-
T Consensus 268 ~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 268 EHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred cchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 6544 22456778999999999998754
No 42
>PLN03150 hypothetical protein; Provisional
Probab=98.87 E-value=1.7e-09 Score=119.59 Aligned_cols=87 Identities=28% Similarity=0.303 Sum_probs=61.8
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccC-cccceeeec
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFAD-LHAITHLAI 295 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~-l~~L~~L~L 295 (604)
+|+.|+|++|.|+...+..|..+++|+.|+|++|+|+...|..|..|++|+.|+|++|+|+...+..+.. +.++..+++
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~ 522 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNF 522 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEe
Confidence 6777788888877666666777888888888888887766777777888888888888877433333333 345667777
Q ss_pred cCCCcccc
Q psy15407 296 GGNPLYCD 303 (604)
Q Consensus 296 ~~Npl~Cd 303 (604)
.+|+..|.
T Consensus 523 ~~N~~lc~ 530 (623)
T PLN03150 523 TDNAGLCG 530 (623)
T ss_pred cCCccccC
Confidence 78877764
No 43
>KOG0994|consensus
Probab=98.87 E-value=1.2e-08 Score=110.80 Aligned_cols=209 Identities=28% Similarity=0.629 Sum_probs=108.4
Q ss_pred eee-eCCCCCcCCCCcccCCCCCCCCCCCC--------CeeeeCC-CCceEeeCCCCCcCCCCCcCCCcCCCCCCCCCcE
Q psy15407 380 YQC-RCTPGYHGQHCEFMIDACYGNPCRNS--------GTCKLLE-EGRFNCECAPGYTGDRCEINIDDCLSHKCENNAT 449 (604)
Q Consensus 380 ~~C-~C~~g~~G~~c~~~~~~C~~~~C~~~--------~~C~~~~-~~~~~C~C~~g~~g~~C~~~~~~C~~~~C~~~~~ 449 (604)
+.| .|-.||+|..=-..-..|.+-||+.+ .+|...+ .....|.|.+||.|.+|+.-.+.=..+|=. +|+
T Consensus 885 ~~CdrCl~GyyGdP~lg~g~~CrPCpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~G~RCe~CA~~~fGnP~~-GGt 963 (1758)
T KOG0994|consen 885 HSCDRCLDGYYGDPRLGSGIGCRPCPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYSGSRCEICADNHFGNPSE-GGT 963 (1758)
T ss_pred cchhhhhccccCCcccCCCCCCCCCCCCCCCccchhccccccccccccceeeecccCccccchhhhcccccCCccc-CCc
Confidence 444 57777776532222234555555432 1343221 235689999999999997311110111211 222
Q ss_pred E---------------------------EeCCCCeEE-ecCCCCCCCCcccCCCcCCCCCCCCCCCCceeecCCCeEEec
Q psy15407 450 C---------------------------VDLIQAYEC-RCAPGFQGEFCQTKTPFCAGEYNPCRNGARCLDHFSHYTCEC 501 (604)
Q Consensus 450 C---------------------------~~~~~~~~C-~C~~g~~g~~C~~~~~~C~~~~~~C~~~~~C~~~~~~~~C~C 501 (604)
| ...+.+..| .|..||.|+.-...-..|.-+.-.-.+.+.|. .-+..|.|
T Consensus 964 Cq~CeC~~NiD~~d~~aCD~~TG~CLkCL~hTeG~hCe~Ck~Gf~GdA~~q~CqrC~Cn~LGTn~~~~CD--r~tGQCpC 1041 (1758)
T KOG0994|consen 964 CQKCECSNNIDLYDPGACDVATGACLKCLYHTEGDHCEHCKDGFYGDALRQNCQRCVCNFLGTNSTCHCD--RFTGQCPC 1041 (1758)
T ss_pred cccccccCCcCccCCCccchhhchhhhhhhcccccchhhccccchhHHHHhhhhhheccccccCCccccc--cccCcCCC
Confidence 2 111223345 58888887632111111110000000112332 23456888
Q ss_pred CCCCcCCcCccc---------CCCCCCCCCC--CCCEEeeCCCCeEeeeCCCCccCCCCcCcccccCCCCCCCCCCCCCC
Q psy15407 502 TPGFSGVNCTVN---------VDDCVNHMCQ--NGGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCK 570 (604)
Q Consensus 502 ~~g~~g~~c~~~---------~~~C~~~~C~--~~~~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C~~~~C~ 570 (604)
.|...|..|..- -.-|.+-.|. .+-+|....| +|.|.+||-|..|..+.. .++......|...+|.
T Consensus 1042 lpNv~G~~CDqCA~N~w~laSG~GCe~C~Cd~~~~pqCN~ftG--QCqCkpGfGGR~C~qCqe-l~WGdP~~~C~aCdCd 1118 (1758)
T KOG0994|consen 1042 LPNVQGVRCDQCAENHWNLASGEGCEPCNCDPIGGPQCNEFTG--QCQCKPGFGGRTCSQCQE-LYWGDPNEKCRACDCD 1118 (1758)
T ss_pred CcccccccccccccchhccccCCCCCccCCCccCCcccccccc--ceeccCCCCCcchhHHHH-hhcCCCCCCceecCCC
Confidence 888888777420 0112221222 2336766666 899999999999987643 3344445577777775
Q ss_pred C-Cc----eeCCCCCCCeeeecCCCCcCCCCCC
Q psy15407 571 N-GI----CFQPQGSNDYLCKCAPGYSGKESLL 598 (604)
Q Consensus 571 ~-g~----C~~~~g~~~~~C~C~~G~~G~~C~~ 598 (604)
. |+ |....| .|+|.+|..|.+|+.
T Consensus 1119 ~rG~~tpQCdr~tG----~C~C~~Gv~G~rCdq 1147 (1758)
T KOG0994|consen 1119 PRGIETPQCDRATG----RCVCRPGVGGPRCDQ 1147 (1758)
T ss_pred CCCCCCCCccccCC----ceeecCCCCCcchhh
Confidence 3 21 665554 377777777777763
No 44
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=98.87 E-value=7.1e-10 Score=132.51 Aligned_cols=80 Identities=36% Similarity=0.724 Sum_probs=71.8
Q ss_pred EccCCccccCCcccccCcccceeeeccCCCcccccCCCccccccccccc---cCCccccCCCCcccccccccCCCCceee
Q psy15407 270 SLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDCGLAWLSEWVKRDYV---EPGIARCTEPASMRDKLLLTAPASSFQC 346 (604)
Q Consensus 270 ~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~CdC~l~~l~~~~~~~~~---~~~~~~C~~P~~l~g~~l~~~~~~~~~C 346 (604)
||++|+|+.|+++.|..|++|+.|+|++|||+|||+|+||.+|++.... ......|+.|..++|+.+.+++..+|.|
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC~L~WL~~WL~~~~v~v~~~~~i~CasP~~LrG~~L~~l~~~d~~C 80 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDCGLARLPRWAEEKGVKVRQPEAALCAGPGALAGQPLLGIPLLDSGC 80 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccccccccHHHHHHHHhcCccccCCcccCCCCChHHCCCCcccCCcccCCC
Confidence 6899999999999999999999999999999999999999999987643 2345789999999999999999988888
Q ss_pred cCc
Q psy15407 347 KEK 349 (604)
Q Consensus 347 ~~~ 349 (604)
..+
T Consensus 81 ~~~ 83 (2740)
T TIGR00864 81 DEE 83 (2740)
T ss_pred CCc
Confidence 743
No 45
>KOG0532|consensus
Probab=98.87 E-value=3.9e-11 Score=122.61 Aligned_cols=179 Identities=22% Similarity=0.185 Sum_probs=144.3
Q ss_pred CeEEcCCCCCCcCCCCCC----ccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCC
Q psy15407 97 TRVDCSQRGLKEIPKDIP----LYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDN 172 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~l~----~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~ 172 (604)
.++.+++..|+.+|..-. ..++.++|+.|++..||.+ +..+..|+.|.|..|.|..|+. +...|..|..|+|+
T Consensus 53 g~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~--~~~f~~Le~liLy~n~~r~ip~-~i~~L~~lt~l~ls 129 (722)
T KOG0532|consen 53 GRLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEE--ACAFVSLESLILYHNCIRTIPE-AICNLEALTFLDLS 129 (722)
T ss_pred cccccccchhhcCCCccccccccchhhhhccccccccCchH--HHHHHHHHHHHHHhccceecch-hhhhhhHHHHhhhc
Confidence 468899999999987542 3448899999999999886 8889999999999999999875 67788888888888
Q ss_pred CCCCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcc
Q psy15407 173 YCPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKL 252 (604)
Q Consensus 173 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l 252 (604)
.|.+..++. +....-|+.|-+++|+++.++.. ++.+..|..|+.+.|.|
T Consensus 130 ~NqlS~lp~------------------------------~lC~lpLkvli~sNNkl~~lp~~-ig~~~tl~~ld~s~nei 178 (722)
T KOG0532|consen 130 SNQLSHLPD------------------------------GLCDLPLKVLIVSNNKLTSLPEE-IGLLPTLAHLDVSKNEI 178 (722)
T ss_pred cchhhcCCh------------------------------hhhcCcceeEEEecCccccCCcc-cccchhHHHhhhhhhhh
Confidence 765432111 00012578888999999999884 55899999999999999
Q ss_pred eeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeeccCCCcc----cccCCCccccc
Q psy15407 253 QCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLY----CDCGLAWLSEW 312 (604)
Q Consensus 253 ~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~Npl~----CdC~l~~l~~~ 312 (604)
..+++ .+.+|.+|+.|++..|++..+|++.. .| .|..||++.|.+. |-++|+.|...
T Consensus 179 ~slps-ql~~l~slr~l~vrRn~l~~lp~El~-~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l 239 (722)
T KOG0532|consen 179 QSLPS-QLGYLTSLRDLNVRRNHLEDLPEELC-SL-PLIRLDFSCNKISYLPVDFRKMRHLQVL 239 (722)
T ss_pred hhchH-HhhhHHHHHHHHHhhhhhhhCCHHHh-CC-ceeeeecccCceeecchhhhhhhhheee
Confidence 99954 67899999999999999999999754 66 4889999999885 77777666543
No 46
>KOG4260|consensus
Probab=98.87 E-value=2.9e-09 Score=98.30 Aligned_cols=79 Identities=25% Similarity=0.679 Sum_probs=61.2
Q ss_pred ecCCCCCC--CCcccCCCcCCCCCCCCCCCCceeecCCCeEEecCCCCcCCcCcccCCCCCC--CCC-CCCCEEeeCCCC
Q psy15407 460 RCAPGFQG--EFCQTKTPFCAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCTVNVDDCVN--HMC-QNGGTCVDGIND 534 (604)
Q Consensus 460 ~C~~g~~g--~~C~~~~~~C~~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~c~~~~~~C~~--~~C-~~~~~C~~~~~~ 534 (604)
.|..||.- ..| .++++|...+.+|..+..|+|+.|+|.|.+.+||.+. +|+|.- ..| ..+..|.++.+.
T Consensus 221 kCkkGW~lde~gC-vDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g-----~d~C~~~~d~~~~kn~~c~ni~~~ 294 (350)
T KOG4260|consen 221 KCKKGWKLDEEGC-VDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKKG-----VDECQFCADVCASKNRPCMNIDGQ 294 (350)
T ss_pred hhcccceeccccc-ccHHHHhcCCCCCChhheeecCCCceEecccccccCC-----hHHhhhhhhhcccCCCCcccCCcc
Confidence 58888873 345 5889999888899988999999999999999999862 344432 222 235678889999
Q ss_pred eEeeeCCCCc
Q psy15407 535 YTCKCEGDFV 544 (604)
Q Consensus 535 y~C~C~~G~~ 544 (604)
|+|+|..|+.
T Consensus 295 ~r~v~f~~~~ 304 (350)
T KOG4260|consen 295 YRCVCFSGLI 304 (350)
T ss_pred EEEEecccce
Confidence 9999999885
No 47
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.86 E-value=2e-10 Score=117.36 Aligned_cols=85 Identities=28% Similarity=0.230 Sum_probs=44.9
Q ss_pred cceeecCCCCceeeccC----CCCCCCCCCCeEEecCCcceeeecccc-----CCCCcccEEEccCCccccCCc----cc
Q psy15407 217 STMYRDLSNNQIGFLSN----FTFSPLSKLSQLILSYNKLQCIDRDAL-----AGLKSLRIISLHGNDISMIPE----GA 283 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~----~~f~~l~~L~~L~Ls~N~l~~i~~~~f-----~~l~~L~~L~Ls~N~l~~i~~----~~ 283 (604)
+|+.|+|++|.|+.... ..+..+++|++|+|++|.++......+ ...+.|+.|+|++|.|+.... ..
T Consensus 194 ~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~ 273 (319)
T cd00116 194 NLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEV 273 (319)
T ss_pred CCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHH
Confidence 56666666666653321 234455666677777666654221111 123566666776666641110 12
Q ss_pred ccCcccceeeeccCCCcc
Q psy15407 284 FADLHAITHLAIGGNPLY 301 (604)
Q Consensus 284 f~~l~~L~~L~L~~Npl~ 301 (604)
+..+++|+.|++++|.+.
T Consensus 274 ~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 274 LAEKESLLELDLRGNKFG 291 (319)
T ss_pred HhcCCCccEEECCCCCCc
Confidence 334456666666666654
No 48
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.84 E-value=1.2e-10 Score=118.92 Aligned_cols=81 Identities=20% Similarity=0.069 Sum_probs=52.9
Q ss_pred CeEEcCCCCCC-----cCCCCCC--ccCcEEecCCCcceeecCC-----CccCCCCCCcEEeCCCCcceecCCCcCCCcc
Q psy15407 97 TRVDCSQRGLK-----EIPKDIP--LYTTELILNDNEIGKIKSD-----GLFGRLPNLIKLDLRRNQVTGIEDNAFEGEN 164 (604)
Q Consensus 97 ~~l~cs~~~L~-----~iP~~l~--~~~~~L~L~~N~i~~i~~~-----~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~ 164 (604)
+.++++++.++ .|+..+. ..+++|+++++.+..++.. ..|..+++|++|+|++|.+....+..|..+.
T Consensus 26 ~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~ 105 (319)
T cd00116 26 QVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLL 105 (319)
T ss_pred cEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHh
Confidence 57788888774 3444443 3368888888877632110 1267788889999988888765555555554
Q ss_pred c---CCcCCCCCCCCC
Q psy15407 165 D---QGCLGDNYCPPK 177 (604)
Q Consensus 165 ~---L~~L~l~~~~~~ 177 (604)
+ |+.|+++.|.+.
T Consensus 106 ~~~~L~~L~ls~~~~~ 121 (319)
T cd00116 106 RSSSLQELKLNNNGLG 121 (319)
T ss_pred ccCcccEEEeeCCccc
Confidence 4 888888776543
No 49
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.81 E-value=2.4e-09 Score=112.85 Aligned_cols=176 Identities=26% Similarity=0.210 Sum_probs=129.6
Q ss_pred CCeEEcCCCCCCcCCCCCCc---cCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCC
Q psy15407 96 GTRVDCSQRGLKEIPKDIPL---YTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDN 172 (604)
Q Consensus 96 ~~~l~cs~~~L~~iP~~l~~---~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~ 172 (604)
.+.+++.++.+++||..+.. .+++|++++|.|..++.. +..+++|+.|+|++|+|+.+++... .+.+|+.|+++
T Consensus 118 l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~--~~~l~~L~~L~l~~N~l~~l~~~~~-~~~~L~~L~ls 194 (394)
T COG4886 118 LTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSP--LRNLPNLKNLDLSFNDLSDLPKLLS-NLSNLNNLDLS 194 (394)
T ss_pred eeEEecCCcccccCccccccchhhcccccccccchhhhhhh--hhccccccccccCCchhhhhhhhhh-hhhhhhheecc
Confidence 36899999999999986632 799999999999999643 7899999999999999999987532 67888999999
Q ss_pred CCCCCccccccEEEccCCccccccccc-cceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCc
Q psy15407 173 YCPPKCTCTVRVLFYDGRAGECYIAVE-LFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNK 251 (604)
Q Consensus 173 ~~~~~~~~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 251 (604)
.|.+..++... .......++.+..+ .......+.. ...+..|.+++|++..++ ..+..++.|++|++++|.
T Consensus 195 ~N~i~~l~~~~--~~~~~L~~l~~~~N~~~~~~~~~~~-----~~~l~~l~l~~n~~~~~~-~~~~~l~~l~~L~~s~n~ 266 (394)
T COG4886 195 GNKISDLPPEI--ELLSALEELDLSNNSIIELLSSLSN-----LKNLSGLELSNNKLEDLP-ESIGNLSNLETLDLSNNQ 266 (394)
T ss_pred CCccccCchhh--hhhhhhhhhhhcCCcceecchhhhh-----cccccccccCCceeeecc-chhccccccceecccccc
Confidence 88765544321 01111222222222 1111111111 126677779999988863 367888999999999999
Q ss_pred ceeeeccccCCCCcccEEEccCCccccCCcccc
Q psy15407 252 LQCIDRDALAGLKSLRIISLHGNDISMIPEGAF 284 (604)
Q Consensus 252 l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f 284 (604)
|+.++. +..+.+|+.|++++|.+..+++...
T Consensus 267 i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 267 ISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred cccccc--ccccCccCEEeccCccccccchhhh
Confidence 999976 8899999999999999998876543
No 50
>KOG1226|consensus
Probab=98.81 E-value=5.1e-08 Score=103.41 Aligned_cols=121 Identities=34% Similarity=0.892 Sum_probs=91.6
Q ss_pred EeeCCCCCcCCCCCcCC---------CcCCC----CCCCCCcEEEeCCCCeEEecCCCCC----CCCcccCCCcCCCCC-
Q psy15407 420 NCECAPGYTGDRCEINI---------DDCLS----HKCENNATCVDLIQAYECRCAPGFQ----GEFCQTKTPFCAGEY- 481 (604)
Q Consensus 420 ~C~C~~g~~g~~C~~~~---------~~C~~----~~C~~~~~C~~~~~~~~C~C~~g~~----g~~C~~~~~~C~~~~- 481 (604)
.|.|.+||.|..||... +.|.. .+|++.|.|+=. .|.|.+... |..|+.+.-.|....
T Consensus 479 ~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~CG----qC~C~~~~~~~i~G~fCECDnfsC~r~~g 554 (783)
T KOG1226|consen 479 QCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVCG----QCVCHKPDNGKIYGKFCECDNFSCERHKG 554 (783)
T ss_pred ceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeCC----ceEecCCCCCceeeeeeeccCcccccccC
Confidence 47999999999998432 23431 379999988642 588988776 899987776676432
Q ss_pred CCCCCCCceeecCCCeEEecCCCCcCCcCc--ccCCCCCCC---CCCCCCEEeeCCCCeEeeeCCC-CccCCCCcCc
Q psy15407 482 NPCRNGARCLDHFSHYTCECTPGFSGVNCT--VNVDDCVNH---MCQNGGTCVDGINDYTCKCEGD-FVGKFCEIAP 552 (604)
Q Consensus 482 ~~C~~~~~C~~~~~~~~C~C~~g~~g~~c~--~~~~~C~~~---~C~~~~~C~~~~~~y~C~C~~G-~~G~~C~~~~ 552 (604)
..|..+|.|.- .+|+|.+||+|..|. .+.+.|.+. -|+..|+|.-+ +|+|... |.|..||.++
T Consensus 555 ~lC~g~G~C~C----G~CvC~~GwtG~~C~C~~std~C~~~~G~iCSGrG~C~Cg----~C~C~~~~~sG~~CE~cp 623 (783)
T KOG1226|consen 555 VLCGGHGRCEC----GRCVCNPGWTGSACNCPLSTDTCESSDGQICSGRGTCECG----RCKCTDPPYSGEFCEKCP 623 (783)
T ss_pred cccCCCCeEeC----CcEEcCCCCccCCCCCCCCCccccCCCCceeCCCceeeCC----ceEcCCCCcCcchhhcCC
Confidence 34888888854 369999999999886 456777643 48899999876 7999876 9999999864
No 51
>KOG4260|consensus
Probab=98.79 E-value=7.1e-09 Score=95.79 Aligned_cols=167 Identities=25% Similarity=0.594 Sum_probs=100.1
Q ss_pred eeeCCCCCcCCCCcccCCCCCCCCCCCCCeeeeC--CCCceEeeCCCCCcCCCCCcCCCcCCCCCCCCCcEEEeCCCCeE
Q psy15407 381 QCRCTPGYHGQHCEFMIDACYGNPCRNSGTCKLL--EEGRFNCECAPGYTGDRCEINIDDCLSHKCENNATCVDLIQAYE 458 (604)
Q Consensus 381 ~C~C~~g~~G~~c~~~~~~C~~~~C~~~~~C~~~--~~~~~~C~C~~g~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~ 458 (604)
.--|+.|-.|.+|.. ...-...||..+|.|.-. ..|+..|.|.+||.|+.|. +|.
T Consensus 129 kvCCp~gtyGpdCl~-Cpggser~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~----~Cg------------------ 185 (350)
T KOG4260|consen 129 KVCCPDGTYGPDCLQ-CPGGSERPCFGNGSCHGDGSREGSGKCKCETGYTGPLCR----YCG------------------ 185 (350)
T ss_pred eeccCCCCcCCcccc-CCCCCcCCcCCCCcccCCCCCCCCCcccccCCCCCcccc----ccc------------------
Confidence 445888888988873 222244678888888642 2456788888888888875 221
Q ss_pred EecCCCCCCCCcccCCCcCCCCCCCCCCCCceeecCCCeEE-ecCCCCcCC--cCcccCCCCC--CCCCCCCCEEeeCCC
Q psy15407 459 CRCAPGFQGEFCQTKTPFCAGEYNPCRNGARCLDHFSHYTC-ECTPGFSGV--NCTVNVDDCV--NHMCQNGGTCVDGIN 533 (604)
Q Consensus 459 C~C~~g~~g~~C~~~~~~C~~~~~~C~~~~~C~~~~~~~~C-~C~~g~~g~--~c~~~~~~C~--~~~C~~~~~C~~~~~ 533 (604)
.+|.-..-...--.|..-...|. +.|... ++-.| .|..||.-. .| .|+|+|. +.||..+-.|+++.|
T Consensus 186 ----~eyfes~Rne~~lvCt~Ch~~C~--~~Csg~-~~k~C~kCkkGW~lde~gC-vDvnEC~~ep~~c~~~qfCvNteG 257 (350)
T KOG4260|consen 186 ----IEYFESSRNEQHLVCTACHEGCL--GVCSGE-SSKGCSKCKKGWKLDEEGC-VDVNECQNEPAPCKAHQFCVNTEG 257 (350)
T ss_pred ----hHHHHhhcccccchhhhhhhhhh--cccCCC-CCCChhhhcccceeccccc-ccHHHHhcCCCCCChhheeecCCC
Confidence 11110000000000110001121 123211 12235 588999743 34 5899996 467999999999999
Q ss_pred CeEeeeCCCCccC--CCCcCcccccCCCCCCCCCCCCCCCCceeCCCCCCCeeeecCCCCc
Q psy15407 534 DYTCKCEGDFVGK--FCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYS 592 (604)
Q Consensus 534 ~y~C~C~~G~~G~--~C~~~~~~~~~~~~~~~C~~~~C~~g~C~~~~g~~~~~C~C~~G~~ 592 (604)
+|.|.+++||.+. .|+.+ .+.|.. .++.|.++. ++|+|+|..|+.
T Consensus 258 Sf~C~dk~Gy~~g~d~C~~~---------~d~~~~---kn~~c~ni~--~~~r~v~f~~~~ 304 (350)
T KOG4260|consen 258 SFKCEDKEGYKKGVDECQFC---------ADVCAS---KNRPCMNID--GQYRCVCFSGLI 304 (350)
T ss_pred ceEecccccccCChHHhhhh---------hhhccc---CCCCcccCC--ccEEEEecccce
Confidence 9999999999853 12211 122322 245699999 789999999874
No 52
>KOG0531|consensus
Probab=98.74 E-value=1.1e-09 Score=115.76 Aligned_cols=145 Identities=29% Similarity=0.222 Sum_probs=80.2
Q ss_pred EEcCCCCCCcCCCCC--CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCCC
Q psy15407 99 VDCSQRGLKEIPKDI--PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPP 176 (604)
Q Consensus 99 l~cs~~~L~~iP~~l--~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~~ 176 (604)
+.++.+.++.+-..+ ...++.|+|.+|+|..|... +..+++|++|+|++|+|+.|.. +..+..|+.|++++|++
T Consensus 77 l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~--l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i 152 (414)
T KOG0531|consen 77 LNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENL--LSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLI 152 (414)
T ss_pred hccchhhhhhhhcccccccceeeeeccccchhhcccc--hhhhhcchheeccccccccccc--hhhccchhhheeccCcc
Confidence 345666666532222 45567777777777777542 5667777777777777777754 44455566777776665
Q ss_pred CccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccC-CCCCCCCCCCeEEecCCcceee
Q psy15407 177 KCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSN-FTFSPLSKLSQLILSYNKLQCI 255 (604)
Q Consensus 177 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~-~~f~~l~~L~~L~Ls~N~l~~i 255 (604)
..+..+.. ...|+.++|++|+|+.+.. . ...+.+|+.|+|..|.|..+
T Consensus 153 ~~~~~~~~------------------------------l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i 201 (414)
T KOG0531|consen 153 SDISGLES------------------------------LKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI 201 (414)
T ss_pred hhccCCcc------------------------------chhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc
Confidence 43333222 1155555666666655554 2 34455555555555555554
Q ss_pred eccccCCCCcccEEEccCCccccCC
Q psy15407 256 DRDALAGLKSLRIISLHGNDISMIP 280 (604)
Q Consensus 256 ~~~~f~~l~~L~~L~Ls~N~l~~i~ 280 (604)
. .+..+..+..+++..|.|+.+.
T Consensus 202 ~--~~~~~~~l~~~~l~~n~i~~~~ 224 (414)
T KOG0531|consen 202 E--GLDLLKKLVLLSLLDNKISKLE 224 (414)
T ss_pred c--chHHHHHHHHhhcccccceecc
Confidence 2 2222333344444444444443
No 53
>KOG0531|consensus
Probab=98.72 E-value=2.7e-09 Score=112.76 Aligned_cols=80 Identities=20% Similarity=0.186 Sum_probs=67.2
Q ss_pred CeEEcCCCCCCcCCCCC--CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCC
Q psy15407 97 TRVDCSQRGLKEIPKDI--PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYC 174 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~l--~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~ 174 (604)
..|++.+|+|..|...+ ...+++|+|++|.|+.|.. +..|+.|+.|+|++|.|+.+.. |..+.+|+.|++++|
T Consensus 98 ~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~---l~~l~~L~~L~l~~N~i~~~~~--~~~l~~L~~l~l~~n 172 (414)
T KOG0531|consen 98 EALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEG---LSTLTLLKELNLSGNLISDISG--LESLKSLKLLDLSYN 172 (414)
T ss_pred eeeeccccchhhcccchhhhhcchheeccccccccccc---hhhccchhhheeccCcchhccC--CccchhhhcccCCcc
Confidence 67999999999987733 5678999999999999965 7889999999999999999975 556899999999998
Q ss_pred CCCcccc
Q psy15407 175 PPKCTCT 181 (604)
Q Consensus 175 ~~~~~~~ 181 (604)
....+..
T Consensus 173 ~i~~ie~ 179 (414)
T KOG0531|consen 173 RIVDIEN 179 (414)
T ss_pred hhhhhhh
Confidence 6554443
No 54
>KOG0994|consensus
Probab=98.71 E-value=1.3e-07 Score=102.95 Aligned_cols=214 Identities=26% Similarity=0.610 Sum_probs=119.8
Q ss_pred eeeeCCCCCcCCCCccc------CCCCCCCCCCCC--------Cee---eeCCCCceEe-eCCCCCcCCCCCcCCCcCCC
Q psy15407 380 YQCRCTPGYHGQHCEFM------IDACYGNPCRNS--------GTC---KLLEEGRFNC-ECAPGYTGDRCEINIDDCLS 441 (604)
Q Consensus 380 ~~C~C~~g~~G~~c~~~------~~~C~~~~C~~~--------~~C---~~~~~~~~~C-~C~~g~~g~~C~~~~~~C~~ 441 (604)
..|.|.+|-.|..|..- ..+|.+-.|..+ |.| ... ..++.| .|..||.|+.---....|.+
T Consensus 830 GQC~C~~g~ygrqCnqCqpG~WgFPeCr~CqCNgHA~~Cd~~tGaCi~CqD~-T~G~~CdrCl~GyyGdP~lg~g~~CrP 908 (1758)
T KOG0994|consen 830 GQCQCRPGTYGRQCNQCQPGYWGFPECRPCQCNGHADTCDPITGACIDCQDS-TTGHSCDRCLDGYYGDPRLGSGIGCRP 908 (1758)
T ss_pred cceeeccccchhhccccCCCccCCCcCccccccCcccccCcccccccccccc-ccccchhhhhccccCCcccCCCCCCCC
Confidence 47888777777766421 123332222221 223 222 345567 79999988643323345555
Q ss_pred CCCCCCc--------EEE--eCCCCeEEecCCCCCCCCcccCCC---------------cCCC-----CCCCCCCC-C--
Q psy15407 442 HKCENNA--------TCV--DLIQAYECRCAPGFQGEFCQTKTP---------------FCAG-----EYNPCRNG-A-- 488 (604)
Q Consensus 442 ~~C~~~~--------~C~--~~~~~~~C~C~~g~~g~~C~~~~~---------------~C~~-----~~~~C~~~-~-- 488 (604)
-||..+. .|. +......|.|.+||.|..|+...+ +|.. ++..|... |
T Consensus 909 CpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~G~RCe~CA~~~fGnP~~GGtCq~CeC~~NiD~~d~~aCD~~TG~C 988 (1758)
T KOG0994|consen 909 CPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYSGSRCEICADNHFGNPSEGGTCQKCECSNNIDLYDPGACDVATGAC 988 (1758)
T ss_pred CCCCCCCccchhccccccccccccceeeecccCccccchhhhcccccCCcccCCccccccccCCcCccCCCccchhhchh
Confidence 5665432 343 223456799999999998864221 0110 01112211 1
Q ss_pred -ceeecCCCeEEe-cCCCCcCCcCcccCCCCCCCCC--CCCCEEeeCCCCeEeeeCCCCccCCCCcCcccccCCCCCCCC
Q psy15407 489 -RCLDHFSHYTCE-CTPGFSGVNCTVNVDDCVNHMC--QNGGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPC 564 (604)
Q Consensus 489 -~C~~~~~~~~C~-C~~g~~g~~c~~~~~~C~~~~C--~~~~~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C 564 (604)
+|.....+.+|. |.+||.|.-=..+-..|.-+.= .+.+.|....| +|-|.+...|..|..+...-+..-....|
T Consensus 989 LkCL~hTeG~hCe~Ck~Gf~GdA~~q~CqrC~Cn~LGTn~~~~CDr~tG--QCpClpNv~G~~CDqCA~N~w~laSG~GC 1066 (1758)
T KOG0994|consen 989 LKCLYHTEGDHCEHCKDGFYGDALRQNCQRCVCNFLGTNSTCHCDRFTG--QCPCLPNVQGVRCDQCAENHWNLASGEGC 1066 (1758)
T ss_pred hhhhhcccccchhhccccchhHHHHhhhhhheccccccCCccccccccC--cCCCCcccccccccccccchhccccCCCC
Confidence 233333445674 8899988532211112211100 02245666666 89999999999998765544444455667
Q ss_pred CCCCCCC-Cc--eeCCCCCCCeeeecCCCCcCCCCCCCc
Q psy15407 565 QHHDCKN-GI--CFQPQGSNDYLCKCAPGYSGKESLLQQ 600 (604)
Q Consensus 565 ~~~~C~~-g~--C~~~~g~~~~~C~C~~G~~G~~C~~~~ 600 (604)
....|.. |+ |..-+|+ |+|.+||.|+.|+..+
T Consensus 1067 e~C~Cd~~~~pqCN~ftGQ----CqCkpGfGGR~C~qCq 1101 (1758)
T KOG0994|consen 1067 EPCNCDPIGGPQCNEFTGQ----CQCKPGFGGRTCSQCQ 1101 (1758)
T ss_pred CccCCCccCCccccccccc----eeccCCCCCcchhHHH
Confidence 7666653 22 8777765 9999999999997543
No 55
>PLN03150 hypothetical protein; Provisional
Probab=98.67 E-value=1.8e-08 Score=111.41 Aligned_cols=126 Identities=20% Similarity=0.166 Sum_probs=97.7
Q ss_pred eCCCeEEcCCCCCCcCCCCCCccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCC
Q psy15407 94 CDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNY 173 (604)
Q Consensus 94 C~~~~l~cs~~~L~~iP~~l~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~ 173 (604)
+.+..|.|+...... ...++.|+|++|.|+...+.. |..|++|+.|+|++|+|+...+..|..+.
T Consensus 402 ~~w~Gv~C~~~~~~~-----~~~v~~L~L~~n~L~g~ip~~-i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~--------- 466 (623)
T PLN03150 402 HPWSGADCQFDSTKG-----KWFIDGLGLDNQGLRGFIPND-ISKLRHLQSINLSGNSIRGNIPPSLGSIT--------- 466 (623)
T ss_pred cccccceeeccCCCC-----ceEEEEEECCCCCccccCCHH-HhCCCCCCEEECCCCcccCcCChHHhCCC---------
Confidence 357778886432110 124688999999997544433 89999999999999999876666676654
Q ss_pred CCCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcce
Q psy15407 174 CPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQ 253 (604)
Q Consensus 174 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~ 253 (604)
+|+.|+|++|+|+...+..|..|++|+.|+|++|+|+
T Consensus 467 -------------------------------------------~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~ 503 (623)
T PLN03150 467 -------------------------------------------SLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLS 503 (623)
T ss_pred -------------------------------------------CCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCccc
Confidence 7788899999999877888999999999999999999
Q ss_pred eeeccccCCC-CcccEEEccCCccc
Q psy15407 254 CIDRDALAGL-KSLRIISLHGNDIS 277 (604)
Q Consensus 254 ~i~~~~f~~l-~~L~~L~Ls~N~l~ 277 (604)
...|..+..+ .++..+++.+|...
T Consensus 504 g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 504 GRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred ccCChHHhhccccCceEEecCCccc
Confidence 7777777653 56788999998743
No 56
>KOG1644|consensus
Probab=98.67 E-value=2.9e-08 Score=89.28 Aligned_cols=81 Identities=25% Similarity=0.241 Sum_probs=48.0
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeec-cccCCCCcccEEEccCCccccCCc---ccccCccccee
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDR-DALAGLKSLRIISLHGNDISMIPE---GAFADLHAITH 292 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~---~~f~~l~~L~~ 292 (604)
.|.+|.|++|+|+.|.+..-.-+++|+.|.|.+|+|..+.. +-+..+++|+.|.|-+|.++.... .++..+++|+.
T Consensus 65 rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~ 144 (233)
T KOG1644|consen 65 RLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRT 144 (233)
T ss_pred ccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceE
Confidence 44455555555555555444445666666666666665432 334556677777777777765443 34556677777
Q ss_pred eeccC
Q psy15407 293 LAIGG 297 (604)
Q Consensus 293 L~L~~ 297 (604)
||++.
T Consensus 145 LDF~k 149 (233)
T KOG1644|consen 145 LDFQK 149 (233)
T ss_pred eehhh
Confidence 77665
No 57
>KOG1226|consensus
Probab=98.61 E-value=3.6e-07 Score=97.10 Aligned_cols=134 Identities=30% Similarity=0.675 Sum_probs=90.8
Q ss_pred CCCCCCcEEEeCCCCeEEecCCCCCCCCcccCCC---------cCCCC--CCCCCCCCceeecCCCeEEecCCCCc----
Q psy15407 442 HKCENNATCVDLIQAYECRCAPGFQGEFCQTKTP---------FCAGE--YNPCRNGARCLDHFSHYTCECTPGFS---- 506 (604)
Q Consensus 442 ~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~~~~~---------~C~~~--~~~C~~~~~C~~~~~~~~C~C~~g~~---- 506 (604)
..|..+|+.+- ..|.|.+||.|..|+-..+ .|... ...|+..|.|+-+ +|.|.+...
T Consensus 467 ~~C~g~G~~~C----G~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~CG----qC~C~~~~~~~i~ 538 (783)
T KOG1226|consen 467 ALCHGNGTFVC----GQCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVCG----QCVCHKPDNGKIY 538 (783)
T ss_pred cccCCCCcEEe----cceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeCC----ceEecCCCCCcee
Confidence 34665555543 2489999999999975432 23221 1268888888653 589988776
Q ss_pred CCcCcccCCCCCCC---CCCCCCEEeeCCCCeEeeeCCCCccCCCCcCcccccCCCCCCCCCCCC---CC-CCceeCCCC
Q psy15407 507 GVNCTVNVDDCVNH---MCQNGGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHD---CK-NGICFQPQG 579 (604)
Q Consensus 507 g~~c~~~~~~C~~~---~C~~~~~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C~~~~---C~-~g~C~~~~g 579 (604)
|..|+-|.-.|..+ .|..+|.|.-+ +|+|.+||+|..|+.+. ..+.|.... |. .|.|.-.
T Consensus 539 G~fCECDnfsC~r~~g~lC~g~G~C~CG----~CvC~~GwtG~~C~C~~-------std~C~~~~G~iCSGrG~C~Cg-- 605 (783)
T KOG1226|consen 539 GKFCECDNFSCERHKGVLCGGHGRCECG----RCVCNPGWTGSACNCPL-------STDTCESSDGQICSGRGTCECG-- 605 (783)
T ss_pred eeeeeccCcccccccCcccCCCCeEeCC----cEEcCCCCccCCCCCCC-------CCccccCCCCceeCCCceeeCC--
Confidence 99998766667654 59999999876 79999999999998642 234443221 21 2334332
Q ss_pred CCCeeeecCCC-CcCCCCCCCc
Q psy15407 580 SNDYLCKCAPG-YSGKESLLQQ 600 (604)
Q Consensus 580 ~~~~~C~C~~G-~~G~~C~~~~ 600 (604)
+|+|... |+|+.||...
T Consensus 606 ----~C~C~~~~~sG~~CE~cp 623 (783)
T KOG1226|consen 606 ----RCKCTDPPYSGEFCEKCP 623 (783)
T ss_pred ----ceEcCCCCcCcchhhcCC
Confidence 4888777 9999999754
No 58
>KOG1644|consensus
Probab=98.56 E-value=9.1e-08 Score=86.15 Aligned_cols=124 Identities=23% Similarity=0.199 Sum_probs=94.3
Q ss_pred CCeEEcCCCCCCcCCC--CCCccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCC
Q psy15407 96 GTRVDCSQRGLKEIPK--DIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNY 173 (604)
Q Consensus 96 ~~~l~cs~~~L~~iP~--~l~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~ 173 (604)
.+.+++++.++..+-. ........+||++|.|..++. |..++.|.+|.|++|+|+.|.+..-.-++
T Consensus 21 e~e~~LR~lkip~ienlg~~~d~~d~iDLtdNdl~~l~~---lp~l~rL~tLll~nNrIt~I~p~L~~~~p--------- 88 (233)
T KOG1644|consen 21 ERELDLRGLKIPVIENLGATLDQFDAIDLTDNDLRKLDN---LPHLPRLHTLLLNNNRITRIDPDLDTFLP--------- 88 (233)
T ss_pred ccccccccccccchhhccccccccceecccccchhhccc---CCCccccceEEecCCcceeeccchhhhcc---------
Confidence 5778888887765543 113345789999999999964 99999999999999999999986443332
Q ss_pred CCCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccC-CCCCCCCCCCeEEecCCcc
Q psy15407 174 CPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSN-FTFSPLSKLSQLILSYNKL 252 (604)
Q Consensus 174 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~-~~f~~l~~L~~L~Ls~N~l 252 (604)
.|..|.|.+|+|..+.+ .-+..+++|++|.|-+|.+
T Consensus 89 -------------------------------------------~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv 125 (233)
T KOG1644|consen 89 -------------------------------------------NLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPV 125 (233)
T ss_pred -------------------------------------------ccceEEecCcchhhhhhcchhccCCccceeeecCCch
Confidence 56777788888877653 4467788999999999988
Q ss_pred eeeec---cccCCCCcccEEEccCC
Q psy15407 253 QCIDR---DALAGLKSLRIISLHGN 274 (604)
Q Consensus 253 ~~i~~---~~f~~l~~L~~L~Ls~N 274 (604)
..... ..+..+++|++||++.=
T Consensus 126 ~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 126 EHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred hcccCceeEEEEecCcceEeehhhh
Confidence 76532 34567899999997643
No 59
>smart00082 LRRCT Leucine rich repeat C-terminal domain.
Probab=98.51 E-value=3.8e-08 Score=70.42 Aligned_cols=50 Identities=14% Similarity=0.351 Sum_probs=40.9
Q ss_pred CceeeecchhhHHHHHHhCCccccCCCCcCCCCCcccccCcccccCCCCceee
Q psy15407 10 NDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGSNDYLC 62 (604)
Q Consensus 10 np~~C~C~l~w~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~c 62 (604)
|||.|||++.||..|+++... ...++..+|..|..++ .++..+..++|.|
T Consensus 1 NP~~CdC~l~~~~~w~~~~~~--~~~~~~~~C~~P~~~~-~~l~~~~~~~~~C 50 (51)
T smart00082 1 NPFICDCELRWLLRWLQANEH--LQDPVSLRCASPSSLR-GPLLELLHSEFKC 50 (51)
T ss_pred CCccCcCCchHHHHHHHhCCc--cCCCCCCEeCCcHHHH-hHHHcCCHhhCCC
Confidence 899999999999999998322 2234579999999999 5688888888877
No 60
>KOG1859|consensus
Probab=98.51 E-value=1.4e-09 Score=114.19 Aligned_cols=126 Identities=28% Similarity=0.332 Sum_probs=98.2
Q ss_pred CeEEcCCCCCCcCCCCC--CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCC
Q psy15407 97 TRVDCSQRGLKEIPKDI--PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYC 174 (604)
Q Consensus 97 ~~l~cs~~~L~~iP~~l--~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~ 174 (604)
...+++.|.|+.+-..+ .+.++.|+|++|+++.+. ++..+++|++|||++|.|+.++--.-.+
T Consensus 167 ~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~---~Lr~l~~LkhLDlsyN~L~~vp~l~~~g------------ 231 (1096)
T KOG1859|consen 167 ATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVD---NLRRLPKLKHLDLSYNCLRHVPQLSMVG------------ 231 (1096)
T ss_pred hhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhH---HHHhcccccccccccchhccccccchhh------------
Confidence 35789999999887765 567899999999999985 3899999999999999999987533222
Q ss_pred CCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCccee
Q psy15407 175 PPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQC 254 (604)
Q Consensus 175 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~ 254 (604)
-.|..|.|++|.++.+.. +.+|.+|+.|||++|-|..
T Consensus 232 -----------------------------------------c~L~~L~lrnN~l~tL~g--ie~LksL~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 232 -----------------------------------------CKLQLLNLRNNALTTLRG--IENLKSLYGLDLSYNLLSE 268 (1096)
T ss_pred -----------------------------------------hhheeeeecccHHHhhhh--HHhhhhhhccchhHhhhhc
Confidence 257778888888888764 6678888899999998876
Q ss_pred eec-cccCCCCcccEEEccCCccccCC
Q psy15407 255 IDR-DALAGLKSLRIISLHGNDISMIP 280 (604)
Q Consensus 255 i~~-~~f~~l~~L~~L~Ls~N~l~~i~ 280 (604)
... ..+..|..|+.|+|.+|.|---|
T Consensus 269 hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 269 HSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred chhhhHHHHHHHHHHHhhcCCccccCH
Confidence 533 22445678889999999886443
No 61
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.31 E-value=2.5e-06 Score=74.37 Aligned_cols=115 Identities=23% Similarity=0.361 Sum_probs=58.0
Q ss_pred CcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCCCCccccccEEEccCCcccccc
Q psy15407 117 TTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYI 196 (604)
Q Consensus 117 ~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~~~~~~~l~~l~~~~~~~~~~~ 196 (604)
++.+.+.. .+..|... +|.+.++|+.|.+.++ +..|...+|.+..
T Consensus 14 l~~i~~~~-~~~~I~~~-~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~-------------------------------- 58 (129)
T PF13306_consen 14 LESITFPN-TIKKIGEN-AFSNCTSLKSINFPNN-LTSIGDNAFSNCK-------------------------------- 58 (129)
T ss_dssp --EEEETS-T--EE-TT-TTTT-TT-SEEEESST-TSCE-TTTTTT-T--------------------------------
T ss_pred CCEEEECC-CeeEeChh-hccccccccccccccc-ccccceeeeeccc--------------------------------
Confidence 45555553 45566543 3666666666666554 6666666665543
Q ss_pred ccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCcc
Q psy15407 197 AVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDI 276 (604)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l 276 (604)
+|+.+.+.. .+..++...|...++|+.+.+..+ +..|...+|.+. +|+.+.+.. .+
T Consensus 59 --------------------~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~ 114 (129)
T PF13306_consen 59 --------------------SLESITFPN-NLKSIGDNAFSNCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NI 114 (129)
T ss_dssp --------------------T-EEEEETS-TT-EE-TTTTTT-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-
T ss_pred --------------------ccccccccc-cccccccccccccccccccccCcc-ccEEchhhhcCC-CceEEEECC-Cc
Confidence 455556644 666677777888888888888765 778878888876 888887765 67
Q ss_pred ccCCcccccCcccc
Q psy15407 277 SMIPEGAFADLHAI 290 (604)
Q Consensus 277 ~~i~~~~f~~l~~L 290 (604)
+.|+..+|..-++|
T Consensus 115 ~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 115 TKIEENAFKNCTKL 128 (129)
T ss_dssp SS----GGG-----
T ss_pred cEECCccccccccC
Confidence 77777777766555
No 62
>KOG4579|consensus
Probab=98.27 E-value=2.2e-08 Score=84.33 Aligned_cols=86 Identities=21% Similarity=0.257 Sum_probs=61.0
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeecc
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIG 296 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 296 (604)
.++.|+|++|.|+.+|.. |..++.|+.|+|+.|.|...+ ..|..|.+|..|+..+|.+..|+-+.|. -..+-.++|.
T Consensus 78 t~t~lNl~~neisdvPeE-~Aam~aLr~lNl~~N~l~~~p-~vi~~L~~l~~Lds~~na~~eid~dl~~-s~~~al~~lg 154 (177)
T KOG4579|consen 78 TATTLNLANNEISDVPEE-LAAMPALRSLNLRFNPLNAEP-RVIAPLIKLDMLDSPENARAEIDVDLFY-SSLPALIKLG 154 (177)
T ss_pred hhhhhhcchhhhhhchHH-HhhhHHhhhcccccCccccch-HHHHHHHhHHHhcCCCCccccCcHHHhc-cccHHHHHhc
Confidence 566778888888888775 788888888888888887774 3444588888888888888888776442 1223344567
Q ss_pred CCCcccccC
Q psy15407 297 GNPLYCDCG 305 (604)
Q Consensus 297 ~Npl~CdC~ 305 (604)
.+||.=.|.
T Consensus 155 nepl~~~~~ 163 (177)
T KOG4579|consen 155 NEPLGDETK 163 (177)
T ss_pred CCcccccCc
Confidence 778875554
No 63
>KOG4579|consensus
Probab=98.27 E-value=3.9e-08 Score=82.85 Aligned_cols=65 Identities=20% Similarity=0.292 Sum_probs=33.4
Q ss_pred eEEcCCCCCCcCCCCC-----CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcc
Q psy15407 98 RVDCSQRGLKEIPKDI-----PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGEN 164 (604)
Q Consensus 98 ~l~cs~~~L~~iP~~l-----~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~ 164 (604)
.+|+++..|-.|++.+ ...++..+|++|.+..+|+. +-..++.++.|+|++|+|+.++.. |+.++
T Consensus 31 ~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~k-ft~kf~t~t~lNl~~neisdvPeE-~Aam~ 100 (177)
T KOG4579|consen 31 FLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKK-FTIKFPTATTLNLANNEISDVPEE-LAAMP 100 (177)
T ss_pred hcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHH-HhhccchhhhhhcchhhhhhchHH-HhhhH
Confidence 3455555555444432 11224456666666666543 223344666666666666666554 54443
No 64
>KOG2982|consensus
Probab=98.26 E-value=9.1e-08 Score=90.91 Aligned_cols=180 Identities=16% Similarity=0.145 Sum_probs=102.7
Q ss_pred ccCcEEecCCCcceeecCC-CccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCCCCccccccEEEccCCccc
Q psy15407 115 LYTTELILNDNEIGKIKSD-GLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGE 193 (604)
Q Consensus 115 ~~~~~L~L~~N~i~~i~~~-~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~~~~~~~l~~l~~~~~~~~ 193 (604)
..+++|+|.+|.|+....- .++.+||.|+.|+|+.|.+.......-..+.+|+.|.|++-.+.+...-..+....-..+
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vte 150 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTE 150 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhh
Confidence 3458999999999765321 236799999999999999876443322467788888777643333222222222222223
Q ss_pred cccccccceeeeeeccccCCccccceeec---------CCCCceeeccCCCCCCCCCCCeEEecCCcceeeec-cccCCC
Q psy15407 194 CYIAVELFSSRIRVSYYVGNYPVSTMYRD---------LSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDR-DALAGL 263 (604)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~L~~L~---------Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l 263 (604)
+.++.|.+...+.-..-...+...+++|. ++-|++..+ ++++..+.+..+.|+.+.. ..+..+
T Consensus 151 lHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-------Fpnv~sv~v~e~PlK~~s~ek~se~~ 223 (418)
T KOG2982|consen 151 LHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-------FPNVNSVFVCEGPLKTESSEKGSEPF 223 (418)
T ss_pred hhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-------cccchheeeecCcccchhhcccCCCC
Confidence 33322211111000000001111222222 222333222 4567777777787766543 445667
Q ss_pred CcccEEEccCCccccCCc-ccccCcccceeeeccCCCcc
Q psy15407 264 KSLRIISLHGNDISMIPE-GAFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 264 ~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~L~~Npl~ 301 (604)
+.+..|+|+.|+|.+... +.+..++.|..|.+.+||+.
T Consensus 224 p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 224 PSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred CcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 777788888888875543 45777888888888888874
No 65
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.25 E-value=7.1e-07 Score=61.08 Aligned_cols=40 Identities=33% Similarity=0.419 Sum_probs=25.1
Q ss_pred CCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCC
Q psy15407 240 SKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIP 280 (604)
Q Consensus 240 ~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~ 280 (604)
++|++|+|++|+|+.|++ .|..|++|+.|+|++|+|+.++
T Consensus 1 ~~L~~L~l~~N~i~~l~~-~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPP-ELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp TT-SEEEETSSS-SSHGG-HGTTCTTSSEEEETSSCCSBEG
T ss_pred CcceEEEccCCCCcccCc-hHhCCCCCCEEEecCCCCCCCc
Confidence 356677777777776644 4666777777777777776654
No 66
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.19 E-value=3.8e-06 Score=85.80 Aligned_cols=57 Identities=18% Similarity=0.370 Sum_probs=45.9
Q ss_pred CCeEEcCCCCCCcCCCCCCccCcEEecCC-CcceeecCCCccCCCCCCcEEeCCCC-cceecCC
Q psy15407 96 GTRVDCSQRGLKEIPKDIPLYTTELILND-NEIGKIKSDGLFGRLPNLIKLDLRRN-QVTGIED 157 (604)
Q Consensus 96 ~~~l~cs~~~L~~iP~~l~~~~~~L~L~~-N~i~~i~~~~~f~~l~~L~~L~Ls~N-~i~~i~~ 157 (604)
.+.|+++++.|+++| .+|..+++|.|++ +.++.+|.. + .++|++|+|+++ .|..+++
T Consensus 54 l~~L~Is~c~L~sLP-~LP~sLtsL~Lsnc~nLtsLP~~--L--P~nLe~L~Ls~Cs~L~sLP~ 112 (426)
T PRK15386 54 SGRLYIKDCDIESLP-VLPNELTEITIENCNNLTTLPGS--I--PEGLEKLTVCHCPEISGLPE 112 (426)
T ss_pred CCEEEeCCCCCcccC-CCCCCCcEEEccCCCCcccCCch--h--hhhhhheEccCccccccccc
Confidence 378999999999999 6999999999987 777777642 3 368999999998 6765543
No 67
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.19 E-value=4.6e-06 Score=72.62 Aligned_cols=111 Identities=22% Similarity=0.345 Sum_probs=77.2
Q ss_pred eecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCCCCCCccccccEEEccCCccccccccccceeeeeec
Q psy15407 129 KIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVS 208 (604)
Q Consensus 129 ~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (604)
.|+. .+|.+..+|+.+.+.. .++.|...+|.+..
T Consensus 2 ~i~~-~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~-------------------------------------------- 35 (129)
T PF13306_consen 2 SIGN-NAFYNCSNLESITFPN-TIKKIGENAFSNCT-------------------------------------------- 35 (129)
T ss_dssp EE-T-TTTTT-TT--EEEETS-T--EE-TTTTTT-T--------------------------------------------
T ss_pred EECH-HHHhCCCCCCEEEECC-CeeEeChhhccccc--------------------------------------------
Confidence 4555 4599999999999985 79999999998875
Q ss_pred cccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcc
Q psy15407 209 YYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLH 288 (604)
Q Consensus 209 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~ 288 (604)
+|+.+++..+ +..+...+|.+..+|+.+.+.. .+..+...+|...++|+.+++..| +..|+..+|...
T Consensus 36 --------~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~~~~~-~~~i~~~~f~~~- 103 (129)
T PF13306_consen 36 --------SLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNIDIPSN-ITEIGSSSFSNC- 103 (129)
T ss_dssp --------T-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEEEETTT--BEEHTTTTTT--
T ss_pred --------cccccccccc-ccccceeeeecccccccccccc-cccccccccccccccccccccCcc-ccEEchhhhcCC-
Confidence 4556667664 8888899999998999999976 888999999999999999999886 889999999887
Q ss_pred cceeeeccC
Q psy15407 289 AITHLAIGG 297 (604)
Q Consensus 289 ~L~~L~L~~ 297 (604)
+|+.+.+..
T Consensus 104 ~l~~i~~~~ 112 (129)
T PF13306_consen 104 NLKEINIPS 112 (129)
T ss_dssp T--EEE-TT
T ss_pred CceEEEECC
Confidence 888888765
No 68
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.15 E-value=1.1e-06 Score=60.05 Aligned_cols=40 Identities=33% Similarity=0.533 Sum_probs=34.2
Q ss_pred cCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCC
Q psy15407 116 YTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIED 157 (604)
Q Consensus 116 ~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~ 157 (604)
.+++|+|++|+|+.|++. |++|++|+.|+|++|+|+.+++
T Consensus 2 ~L~~L~l~~N~i~~l~~~--l~~l~~L~~L~l~~N~i~~i~~ 41 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPE--LSNLPNLETLNLSNNPISDISP 41 (44)
T ss_dssp T-SEEEETSSS-SSHGGH--GTTCTTSSEEEETSSCCSBEGG
T ss_pred cceEEEccCCCCcccCch--HhCCCCCCEEEecCCCCCCCcC
Confidence 578999999999999874 8999999999999999998754
No 69
>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium. Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.
Probab=98.15 E-value=7.1e-07 Score=78.78 Aligned_cols=138 Identities=28% Similarity=0.708 Sum_probs=82.2
Q ss_pred CCCCCcEEEeCCCCeEEecCCCCC---CCCcccCCCcCCC---CCCCCCCCCceeecC-----CCeEEecCCCCcCCcCc
Q psy15407 443 KCENNATCVDLIQAYECRCAPGFQ---GEFCQTKTPFCAG---EYNPCRNGARCLDHF-----SHYTCECTPGFSGVNCT 511 (604)
Q Consensus 443 ~C~~~~~C~~~~~~~~C~C~~g~~---g~~C~~~~~~C~~---~~~~C~~~~~C~~~~-----~~~~C~C~~g~~g~~c~ 511 (604)
.|.+ |..+...+.|.|.|.+||. -..|+... +|.. ...+|...++|++.. ..|+|.|.+||.-..-.
T Consensus 7 ~CKN-G~LiQMSNHfEC~Cnegfvl~~EntCE~kv-~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~v 84 (197)
T PF06247_consen 7 ICKN-GYLIQMSNHFECKCNEGFVLKNENTCEEKV-ECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQGV 84 (197)
T ss_dssp --BT-EEEEEESSEEEEEESTTEEEEETTEEEE-----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSSS
T ss_pred cccC-CEEEEccCceEEEcCCCcEEccccccccce-ecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCCe
Confidence 3443 6777778889999999996 45676443 4543 235799999998765 57999999999743322
Q ss_pred ccCCCCCCCCCCCCCEEee---CCCCeEeeeCCCCc---cCCCCcCcccccCCCCCCCCCCCCCCCCc-eeCCCCCCCee
Q psy15407 512 VNVDDCVNHMCQNGGTCVD---GINDYTCKCEGDFV---GKFCEIAPFVAMMYPQTSPCQHHDCKNGI-CFQPQGSNDYL 584 (604)
Q Consensus 512 ~~~~~C~~~~C~~~~~C~~---~~~~y~C~C~~G~~---G~~C~~~~~~~~~~~~~~~C~~~~C~~g~-C~~~~g~~~~~ 584 (604)
-..+.|....|. .|.|+- .+....|.|.-|++ ...|... ....|+.. |..+. |.... +-|+
T Consensus 85 Cvp~~C~~~~Cg-~GKCI~d~~~~~~~~CSC~IGkV~~dn~kCtk~--------G~T~C~LK-Ck~nE~CK~~~--~~Y~ 152 (197)
T PF06247_consen 85 CVPNKCNNKDCG-SGKCILDPDNPNNPTCSCNIGKVPDDNKKCTKT--------GETKCSLK-CKENEECKLVD--GYYK 152 (197)
T ss_dssp EEEGGGSS---T-TEEEEEEEGGGSEEEEEE-TEEETTTTTESEEE--------E---------TTTEEEEEET--TEEE
T ss_pred EchhhcCceecC-CCeEEecCCCCCCceeEeeeceEeccCCcccCC--------Cccceeee-cCCCcceeeeC--cEEE
Confidence 234667777888 589974 33456999999998 3345443 24566643 44444 99998 8899
Q ss_pred eecCCCCcCC
Q psy15407 585 CKCAPGYSGK 594 (604)
Q Consensus 585 C~C~~G~~G~ 594 (604)
|.|.+||.|.
T Consensus 153 C~~~~~~~~~ 162 (197)
T PF06247_consen 153 CVCKEGFPGD 162 (197)
T ss_dssp EEE-TT-EEE
T ss_pred eecCCCCCCC
Confidence 9999999753
No 70
>KOG1836|consensus
Probab=98.13 E-value=2.2e-05 Score=93.23 Aligned_cols=215 Identities=27% Similarity=0.568 Sum_probs=121.9
Q ss_pred eeeCCCCCcCCCCcccC-----------CCCCCCCCCCCC---eeeeCC--------CCceEe-eCCCCCcCCCCCcCCC
Q psy15407 381 QCRCTPGYHGQHCEFMI-----------DACYGNPCRNSG---TCKLLE--------EGRFNC-ECAPGYTGDRCEINID 437 (604)
Q Consensus 381 ~C~C~~g~~G~~c~~~~-----------~~C~~~~C~~~~---~C~~~~--------~~~~~C-~C~~g~~g~~C~~~~~ 437 (604)
.|.|++||+|..|+.-. +.|...||..++ +|...+ ..+-.| +|..||.|..=.....
T Consensus 696 ~c~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh~~~Cd~~tG~C~C~~~t~G~~C~~C~~GfYg~~~~~~~~ 775 (1705)
T KOG1836|consen 696 QCTCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGHSNICDPRTGQCKCKHNTFGGQCAQCVDGFYGLPDLGTSG 775 (1705)
T ss_pred hccCCCCcccchhhhcchhhhcccccCCCCCcccccccCCccccccCCCCceecccCCCCCchhhhcCCCCCccccCCCC
Confidence 49999999999997311 112223343333 343211 111123 4666666654332233
Q ss_pred cCCCCCCCCCcEEEeC--CCCeEEe-cCCCCCCCCcccCCCcCCCC-------CCC-----------------CCC-CC-
Q psy15407 438 DCLSHKCENNATCVDL--IQAYECR-CAPGFQGEFCQTKTPFCAGE-------YNP-----------------CRN-GA- 488 (604)
Q Consensus 438 ~C~~~~C~~~~~C~~~--~~~~~C~-C~~g~~g~~C~~~~~~C~~~-------~~~-----------------C~~-~~- 488 (604)
+|.+-+|.+++.|... .....|+ |++||+|..|+...+..-.. ..+ |.. .+
T Consensus 776 dC~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rCe~c~dgyfg~p~~~~~~~~~c~~c~c~~n~dp~~~g~c~~~tg~ 855 (1705)
T KOG1836|consen 776 DCQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLRCEECADGYFGNPLGHDGDVRPCQSCQCNFNVDPNAFGNCNRLTGE 855 (1705)
T ss_pred CCccCCCCCChhhcCcCcccceecCCCCCCCcccccccCCCccccCCCCCCCCcccCccceeccccCccccccccccccc
Confidence 4888899999888764 3567898 99999999997543221110 011 111 11
Q ss_pred --ceeecCCCeEE-ecCCCCcCCcCc-ccCCCCCCCCCCCC------CEEeeCCCCeEeeeCCCCccCCCCcCcccccCC
Q psy15407 489 --RCLDHFSHYTC-ECTPGFSGVNCT-VNVDDCVNHMCQNG------GTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMY 558 (604)
Q Consensus 489 --~C~~~~~~~~C-~C~~g~~g~~c~-~~~~~C~~~~C~~~------~~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~ 558 (604)
+|+....+.+| .|.+||.|..-. ...+.|..-.|... ..|....| .|.|.+.-.|..|..+-..-+..
T Consensus 856 c~~ci~nT~g~~cd~c~~g~~gd~l~~~p~~~c~~c~c~p~gs~~~~~~c~~~tG--Qcec~~~v~g~~c~~c~~g~fnl 933 (1705)
T KOG1836|consen 856 CLKCIHNTAGEYCDLCKEGYFGDPLAPNPEDKCFACGCVPAGSELPSLTCNPVTG--QCECKPNVEGRDCLYCFKGFFNL 933 (1705)
T ss_pred eeeccCCcccccccccccCccccccCCCcCCccccccCccCCcccccccCCCccc--ceeccCCCCcccccccccccccc
Confidence 22222333455 377777776543 12233433233221 23555555 78888888888887654433344
Q ss_pred CCCCCCCCCCCCC-----CceeCCCCCCCeeeecCCCCcCCCCCCCcc
Q psy15407 559 PQTSPCQHHDCKN-----GICFQPQGSNDYLCKCAPGYSGKESLLQQT 601 (604)
Q Consensus 559 ~~~~~C~~~~C~~-----g~C~~~~g~~~~~C~C~~G~~G~~C~~~~~ 601 (604)
.....|....|.. ..|....|+ |.|.+|-+|.+|+..+.
T Consensus 934 ~s~~gC~~c~c~~~gs~~~~c~~~tGq----c~c~~gVtgqrc~qc~~ 977 (1705)
T KOG1836|consen 934 NSGVGCEPCNCDPTGSESSDCDVGTGQ----CYCRPGVTGQRCDQCET 977 (1705)
T ss_pred CCCCCcccccccccccccccccccCCc----eeeecCccccccCcccc
Confidence 4445666655542 237666654 99999999999986553
No 71
>smart00082 LRRCT Leucine rich repeat C-terminal domain.
Probab=98.11 E-value=5.1e-07 Score=64.47 Aligned_cols=49 Identities=41% Similarity=0.923 Sum_probs=39.8
Q ss_pred CCcccccCCCcccccccccc--ccCCccccCCCCcccccccccCCCCceeec
Q psy15407 298 NPLYCDCGLAWLSEWVKRDY--VEPGIARCTEPASMRDKLLLTAPASSFQCK 347 (604)
Q Consensus 298 Npl~CdC~l~~l~~~~~~~~--~~~~~~~C~~P~~l~g~~l~~~~~~~~~C~ 347 (604)
|||.|||++.||..|++... .....+.|.+|..++ ..+.++..++|.|.
T Consensus 1 NP~~CdC~l~~~~~w~~~~~~~~~~~~~~C~~P~~~~-~~l~~~~~~~~~C~ 51 (51)
T smart00082 1 NPFICDCELRWLLRWLQANEHLQDPVSLRCASPSSLR-GPLLELLHSEFKCP 51 (51)
T ss_pred CCccCcCCchHHHHHHHhCCccCCCCCCEeCCcHHHH-hHHHcCCHhhCCCc
Confidence 89999999999999998732 234568999999999 55888887788773
No 72
>KOG1836|consensus
Probab=98.10 E-value=6.4e-05 Score=89.36 Aligned_cols=206 Identities=28% Similarity=0.625 Sum_probs=111.2
Q ss_pred CCCCCcCCCCcccCCCCCCCCCCCCCeeeeCC-CCceEee-CCCCCcCCCCCcCCC--------------cCCCCCCCCC
Q psy15407 384 CTPGYHGQHCEFMIDACYGNPCRNSGTCKLLE-EGRFNCE-CAPGYTGDRCEINID--------------DCLSHKCENN 447 (604)
Q Consensus 384 C~~g~~G~~c~~~~~~C~~~~C~~~~~C~~~~-~~~~~C~-C~~g~~g~~C~~~~~--------------~C~~~~C~~~ 447 (604)
|..||.|..--.....|..-+|.+++.|.... .....|. |++||+|.+|+...+ .|.+.+|..+
T Consensus 761 C~~GfYg~~~~~~~~dC~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rCe~c~dgyfg~p~~~~~~~~~c~~c~c~~n 840 (1705)
T KOG1836|consen 761 CVDGFYGLPDLGTSGDCQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLRCEECADGYFGNPLGHDGDVRPCQSCQCNFN 840 (1705)
T ss_pred hcCCCCCccccCCCCCCccCCCCCChhhcCcCcccceecCCCCCCCcccccccCCCccccCCCCCCCCcccCccceeccc
Confidence 44555543322222338888888888886654 4567897 999999999984332 3333333321
Q ss_pred -------------cEE---EeCCCCeEE-ecCCCCCCCCccc-CCCcCCCCCCCCCCC------CceeecCCCeEEecCC
Q psy15407 448 -------------ATC---VDLIQAYEC-RCAPGFQGEFCQT-KTPFCAGEYNPCRNG------ARCLDHFSHYTCECTP 503 (604)
Q Consensus 448 -------------~~C---~~~~~~~~C-~C~~g~~g~~C~~-~~~~C~~~~~~C~~~------~~C~~~~~~~~C~C~~ 503 (604)
+.| +....+..| .|.+||.|+.-.. ..+.|... .|... ..|... ...|.|.+
T Consensus 841 ~dp~~~g~c~~~tg~c~~ci~nT~g~~cd~c~~g~~gd~l~~~p~~~c~~c--~c~p~gs~~~~~~c~~~--tGQcec~~ 916 (1705)
T KOG1836|consen 841 VDPNAFGNCNRLTGECLKCIHNTAGEYCDLCKEGYFGDPLAPNPEDKCFAC--GCVPAGSELPSLTCNPV--TGQCECKP 916 (1705)
T ss_pred cCccccccccccccceeeccCCcccccccccccCccccccCCCcCCccccc--cCccCCcccccccCCCc--ccceeccC
Confidence 112 222223334 4777777653220 00111100 11111 122211 22455555
Q ss_pred CCcCCcCcc------c---CCCCCCCCCCCC----CEEeeCCCCeEeeeCCCCccCCCCcCcccccCCCCCCCCCCCCCC
Q psy15407 504 GFSGVNCTV------N---VDDCVNHMCQNG----GTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCK 570 (604)
Q Consensus 504 g~~g~~c~~------~---~~~C~~~~C~~~----~~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C~~~~C~ 570 (604)
.-.|..|.. . ...|..-+|..- ..|....| .|.|.+|.+|.+|..+....+... ...|....|.
T Consensus 917 ~v~g~~c~~c~~g~fnl~s~~gC~~c~c~~~gs~~~~c~~~tG--qc~c~~gVtgqrc~qc~~~~~~~~-~~gc~~c~c~ 993 (1705)
T KOG1836|consen 917 NVEGRDCLYCFKGFFNLNSGVGCEPCNCDPTGSESSDCDVGTG--QCYCRPGVTGQRCDQCETYHFGFQ-TEGCGLCECD 993 (1705)
T ss_pred CCCccccccccccccccCCCCCcccccccccccccccccccCC--ceeeecCccccccCccccCccccc-ccCCcceecc
Confidence 555444421 0 113433344432 36766656 899999999999988754433332 3566665564
Q ss_pred C-C----ceeCCCCCCCeeeecCCCCcCCCCCCCc
Q psy15407 571 N-G----ICFQPQGSNDYLCKCAPGYSGKESLLQQ 600 (604)
Q Consensus 571 ~-g----~C~~~~g~~~~~C~C~~G~~G~~C~~~~ 600 (604)
. | .|....| +|.|++|+.|.+|+...
T Consensus 994 ~~Gs~~~qc~~~~G----~c~c~~~~~g~~c~~c~ 1024 (1705)
T KOG1836|consen 994 PLGSRGFQCDPEDG----QCPCRPGFEGRRCDQCE 1024 (1705)
T ss_pred cCCcccceecccCC----eeeecCCCCCccccccc
Confidence 3 3 2776564 59999999998887554
No 73
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=98.06 E-value=2.8e-06 Score=53.59 Aligned_cols=31 Identities=48% Similarity=1.084 Sum_probs=24.9
Q ss_pred CCCCCCCCCCEEeeCC-CCeEeeeCCCCccCC
Q psy15407 517 CVNHMCQNGGTCVDGI-NDYTCKCEGDFVGKF 547 (604)
Q Consensus 517 C~~~~C~~~~~C~~~~-~~y~C~C~~G~~G~~ 547 (604)
|..++|.++|+|++.. ++|+|.|++||+|++
T Consensus 1 C~~~~C~n~g~C~~~~~~~y~C~C~~G~~G~~ 32 (32)
T PF00008_consen 1 CSSNPCQNGGTCIDLPGGGYTCECPPGYTGKR 32 (32)
T ss_dssp TTTTSSTTTEEEEEESTSEEEEEEBTTEESTT
T ss_pred CCCCcCCCCeEEEeCCCCCEEeECCCCCccCC
Confidence 4556888888888877 888888888888863
No 74
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=97.93 E-value=1.4e-05 Score=53.33 Aligned_cols=36 Identities=44% Similarity=1.218 Sum_probs=29.8
Q ss_pred CCCCCC-CCCCCCCEEeeCCCCeEeeeCCCCc-cCCCC
Q psy15407 514 VDDCVN-HMCQNGGTCVDGINDYTCKCEGDFV-GKFCE 549 (604)
Q Consensus 514 ~~~C~~-~~C~~~~~C~~~~~~y~C~C~~G~~-G~~C~ 549 (604)
+++|.. .+|.+++.|++..++|.|.|++||. |..|+
T Consensus 2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g~~C~ 39 (39)
T smart00179 2 IDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRNCE 39 (39)
T ss_pred cccCcCCCCcCCCCEeECCCCCeEeECCCCCccCCcCC
Confidence 567776 6888888999888999999999998 87764
No 75
>KOG4658|consensus
Probab=97.93 E-value=4.2e-06 Score=95.12 Aligned_cols=140 Identities=26% Similarity=0.257 Sum_probs=88.6
Q ss_pred CCCCcCCCCC-CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCc--ceecCCCcCCCcccCCcCCCCCCCCCccc
Q psy15407 104 RGLKEIPKDI-PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQ--VTGIEDNAFEGENDQGCLGDNYCPPKCTC 180 (604)
Q Consensus 104 ~~L~~iP~~l-~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~--i~~i~~~~f~~l~~L~~L~l~~~~~~~~~ 180 (604)
.++.++|... +..++.+.+-+|.+..++.. ...++|++|-+..|. +..++...|..++.|+.|+|++|..
T Consensus 511 ~~~~~~~~~~~~~~~rr~s~~~~~~~~~~~~---~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~---- 583 (889)
T KOG4658|consen 511 VGLSEIPQVKSWNSVRRMSLMNNKIEHIAGS---SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSS---- 583 (889)
T ss_pred cCccccccccchhheeEEEEeccchhhccCC---CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCc----
Confidence 3455566544 44567777888888777543 334578888888775 6777777777777666666664321
Q ss_pred cccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeecccc
Q psy15407 181 TVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDAL 260 (604)
Q Consensus 181 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f 260 (604)
...++...+.+ .+|++|+|+...|..+|. .|.+|.+|.+|+|..+.-....+..+
T Consensus 584 -----------------------l~~LP~~I~~L-i~LryL~L~~t~I~~LP~-~l~~Lk~L~~Lnl~~~~~l~~~~~i~ 638 (889)
T KOG4658|consen 584 -----------------------LSKLPSSIGEL-VHLRYLDLSDTGISHLPS-GLGNLKKLIYLNLEVTGRLESIPGIL 638 (889)
T ss_pred -----------------------cCcCChHHhhh-hhhhcccccCCCccccch-HHHHHHhhheeccccccccccccchh
Confidence 01111111111 267777888877777766 57777778888887776555446666
Q ss_pred CCCCcccEEEccCCc
Q psy15407 261 AGLKSLRIISLHGND 275 (604)
Q Consensus 261 ~~l~~L~~L~Ls~N~ 275 (604)
..|.+|++|.|..-.
T Consensus 639 ~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 639 LELQSLRVLRLPRSA 653 (889)
T ss_pred hhcccccEEEeeccc
Confidence 667788877776554
No 76
>KOG1909|consensus
Probab=97.88 E-value=3.6e-07 Score=88.99 Aligned_cols=85 Identities=24% Similarity=0.271 Sum_probs=63.1
Q ss_pred ccceeecCCCCceeecc----CCCCCCCCCCCeEEecCCcceeeecccc-----CCCCcccEEEccCCccccCC----cc
Q psy15407 216 VSTMYRDLSNNQIGFLS----NFTFSPLSKLSQLILSYNKLQCIDRDAL-----AGLKSLRIISLHGNDISMIP----EG 282 (604)
Q Consensus 216 ~~L~~L~Ls~N~i~~l~----~~~f~~l~~L~~L~Ls~N~l~~i~~~~f-----~~l~~L~~L~Ls~N~l~~i~----~~ 282 (604)
++|+.|||..|.++.-. ..++..+++|++|+|++..|+.--..+| ...++|++|.|.+|.|+.-. ..
T Consensus 213 ~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~ 292 (382)
T KOG1909|consen 213 PHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAA 292 (382)
T ss_pred CcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHH
Confidence 48889999999887532 3467788899999999988876433222 24689999999999988321 12
Q ss_pred cccCcccceeeeccCCCc
Q psy15407 283 AFADLHAITHLAIGGNPL 300 (604)
Q Consensus 283 ~f~~l~~L~~L~L~~Npl 300 (604)
.....+.|..|+|++|.+
T Consensus 293 ~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 293 CMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHhcchhhHHhcCCcccc
Confidence 345578899999999999
No 77
>PF01462 LRRNT: Leucine rich repeat N-terminal domain; InterPro: IPR000372 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain and a C-terminal LRR domain (IPR000483 from INTERPRO). This entry represents the N-terminal LRR domain. ; PDB: 3E6J_A 1W8A_A 2V9S_C 2V9T_B 3TWI_D 3ZYN_A 3ZYO_A 1OOK_G 1QYY_G 1SQ0_B ....
Probab=97.82 E-value=1.3e-05 Score=48.65 Aligned_cols=28 Identities=57% Similarity=1.330 Sum_probs=23.6
Q ss_pred CCCCCCeeCCCeEEcCCCCCCcCCCCCC
Q psy15407 87 ACPSGCSCDGTRVDCSQRGLKEIPKDIP 114 (604)
Q Consensus 87 ~CP~~C~C~~~~l~cs~~~L~~iP~~l~ 114 (604)
.||..|+|..++|+|++.+|++||..||
T Consensus 1 ~CP~~C~C~~~~V~C~~~~L~~vP~~lP 28 (28)
T PF01462_consen 1 ACPRPCTCSGLTVDCSGRGLTAVPSDLP 28 (28)
T ss_dssp SSETTSEEETTEEEETTSS-SSS-STS-
T ss_pred CcCCCCEecCCEeECCCCCCCccCCCCc
Confidence 4899999999999999999999999875
No 78
>KOG4658|consensus
Probab=97.80 E-value=8.6e-06 Score=92.58 Aligned_cols=146 Identities=19% Similarity=0.146 Sum_probs=101.2
Q ss_pred CCeEEcCCCCCCcCCCCC-CccCcEEecCCCc--ceeecCCCccCCCCCCcEEeCCCC-cceecCCCcCCCcccCCcCCC
Q psy15407 96 GTRVDCSQRGLKEIPKDI-PLYTTELILNDNE--IGKIKSDGLFGRLPNLIKLDLRRN-QVTGIEDNAFEGENDQGCLGD 171 (604)
Q Consensus 96 ~~~l~cs~~~L~~iP~~l-~~~~~~L~L~~N~--i~~i~~~~~f~~l~~L~~L~Ls~N-~i~~i~~~~f~~l~~L~~L~l 171 (604)
.+.+..-++.+..++... ...+++|-+..|. +..++. ++|..|+.|+.|||+.| .+..++ ...+.|.+|++|+|
T Consensus 525 ~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~is~-~ff~~m~~LrVLDLs~~~~l~~LP-~~I~~Li~LryL~L 602 (889)
T KOG4658|consen 525 VRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLEISG-EFFRSLPLLRVLDLSGNSSLSKLP-SSIGELVHLRYLDL 602 (889)
T ss_pred eeEEEEeccchhhccCCCCCCccceEEEeecchhhhhcCH-HHHhhCcceEEEECCCCCccCcCC-hHHhhhhhhhcccc
Confidence 467778888888888765 3368899999997 777765 56999999999999987 455654 45677899999988
Q ss_pred CCCCCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeeccCCCCCCCCCCCeEEecCCc
Q psy15407 172 NYCPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNK 251 (604)
Q Consensus 172 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 251 (604)
+......+ +...+.+. .|.+|+|..+......+..+..|.+|++|.|....
T Consensus 603 ~~t~I~~L----------------------------P~~l~~Lk-~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 603 SDTGISHL----------------------------PSGLGNLK-KLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cCCCcccc----------------------------chHHHHHH-hhheeccccccccccccchhhhcccccEEEeeccc
Confidence 87443211 11111122 78899999888666667778889999999997765
Q ss_pred c--eeeeccccCCCCcccEEEcc
Q psy15407 252 L--QCIDRDALAGLKSLRIISLH 272 (604)
Q Consensus 252 l--~~i~~~~f~~l~~L~~L~Ls 272 (604)
. ....-..+..|.+|+.|...
T Consensus 654 ~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 654 LSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred cccchhhHHhhhcccchhhheee
Confidence 2 22222333455566655553
No 79
>smart00013 LRRNT Leucine rich repeat N-terminal domain.
Probab=97.77 E-value=3.1e-05 Score=49.22 Aligned_cols=32 Identities=63% Similarity=1.220 Sum_probs=29.3
Q ss_pred CCCCCCeeCCCeEEcCCCCCCcCCCCCCccCc
Q psy15407 87 ACPSGCSCDGTRVDCSQRGLKEIPKDIPLYTT 118 (604)
Q Consensus 87 ~CP~~C~C~~~~l~cs~~~L~~iP~~l~~~~~ 118 (604)
.||..|+|....|+|++.+|++||.+||.+++
T Consensus 1 ~CP~~C~C~~~~V~C~~~~L~~vP~~iP~~t~ 32 (33)
T smart00013 1 ACPAPCNCSGTAVDCSGRGLTEVPLDLPPDTT 32 (33)
T ss_pred CcCCCCEECCCEeEeCCCCcCccCCCCCcccc
Confidence 38999999999999999999999999987654
No 80
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=97.76 E-value=2.3e-05 Score=53.06 Aligned_cols=32 Identities=34% Similarity=1.025 Sum_probs=26.6
Q ss_pred cCCCCCC--CCCCCCCEEeeCCCCeEeeeCCCCc
Q psy15407 513 NVDDCVN--HMCQNGGTCVDGINDYTCKCEGDFV 544 (604)
Q Consensus 513 ~~~~C~~--~~C~~~~~C~~~~~~y~C~C~~G~~ 544 (604)
|+|||.. +.|..++.|+++.|+|+|.|++||.
T Consensus 1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~ 34 (42)
T PF07645_consen 1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYE 34 (42)
T ss_dssp ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEE
T ss_pred CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcE
Confidence 4678864 4688888999999999999999997
No 81
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=97.74 E-value=2.3e-05 Score=53.09 Aligned_cols=34 Identities=26% Similarity=0.790 Sum_probs=29.2
Q ss_pred CCCcCCCCCCCCCCCCceeecCCCeEEecCCCCc
Q psy15407 473 KTPFCAGEYNPCRNGARCLDHFSHYTCECTPGFS 506 (604)
Q Consensus 473 ~~~~C~~~~~~C~~~~~C~~~~~~~~C~C~~g~~ 506 (604)
+++||....+.|..++.|+++.|+|+|.|++||.
T Consensus 1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~ 34 (42)
T PF07645_consen 1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYE 34 (42)
T ss_dssp ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEE
T ss_pred CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcE
Confidence 4678887778898888999999999999999997
No 82
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=97.74 E-value=1.8e-05 Score=49.95 Aligned_cols=26 Identities=46% Similarity=1.261 Sum_probs=11.3
Q ss_pred CCCCCCcEEEeCC-CCeEEecCCCCCC
Q psy15407 442 HKCENNATCVDLI-QAYECRCAPGFQG 467 (604)
Q Consensus 442 ~~C~~~~~C~~~~-~~~~C~C~~g~~g 467 (604)
.||.++|+|++.. ++|.|.|++||+|
T Consensus 4 ~~C~n~g~C~~~~~~~y~C~C~~G~~G 30 (32)
T PF00008_consen 4 NPCQNGGTCIDLPGGGYTCECPPGYTG 30 (32)
T ss_dssp TSSTTTEEEEEESTSEEEEEEBTTEES
T ss_pred CcCCCCeEEEeCCCCCEEeECCCCCcc
Confidence 3444444444443 4444444444444
No 83
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.
Probab=97.63 E-value=8e-05 Score=49.11 Aligned_cols=36 Identities=44% Similarity=1.208 Sum_probs=29.0
Q ss_pred CCCCCC-CCCCCCCEEeeCCCCeEeeeCCCCccCCCC
Q psy15407 514 VDDCVN-HMCQNGGTCVDGINDYTCKCEGDFVGKFCE 549 (604)
Q Consensus 514 ~~~C~~-~~C~~~~~C~~~~~~y~C~C~~G~~G~~C~ 549 (604)
+++|.. .+|.+++.|++..++|.|.|++||.|..|+
T Consensus 2 ~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C~ 38 (38)
T cd00054 2 IDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNCE 38 (38)
T ss_pred cccCCCCCCcCCCCEeECCCCCeEeECCCCCcCCcCC
Confidence 456765 678888889988888999999999887764
No 84
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=97.63 E-value=8.8e-05 Score=49.33 Aligned_cols=35 Identities=46% Similarity=1.241 Sum_probs=20.9
Q ss_pred CCcCCC-CCCCCCcEEEeCCCCeEEecCCCCC-CCCc
Q psy15407 436 IDDCLS-HKCENNATCVDLIQAYECRCAPGFQ-GEFC 470 (604)
Q Consensus 436 ~~~C~~-~~C~~~~~C~~~~~~~~C~C~~g~~-g~~C 470 (604)
+++|.. .+|.++++|++..++|.|.|++||. |..|
T Consensus 2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g~~C 38 (39)
T smart00179 2 IDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRNC 38 (39)
T ss_pred cccCcCCCCcCCCCEeECCCCCeEeECCCCCccCCcC
Confidence 345554 4566666666666666666666666 5544
No 85
>KOG2739|consensus
Probab=97.54 E-value=2.7e-05 Score=73.59 Aligned_cols=56 Identities=23% Similarity=0.321 Sum_probs=31.0
Q ss_pred CCCCCeEEecCCcceeeec-cccCCCCcccEEEccCCccccCCc---ccccCcccceeee
Q psy15407 239 LSKLSQLILSYNKLQCIDR-DALAGLKSLRIISLHGNDISMIPE---GAFADLHAITHLA 294 (604)
Q Consensus 239 l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~---~~f~~l~~L~~L~ 294 (604)
+++|++|+|+.|+|+.+.. ..+..+.+|..|+|.++..+.+.. .+|.-|++|+.|+
T Consensus 90 ~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD 149 (260)
T KOG2739|consen 90 APNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLD 149 (260)
T ss_pred CCceeEEeecCCccccccccchhhhhcchhhhhcccCCccccccHHHHHHHHhhhhcccc
Confidence 4666666666666654321 223445556666776666555432 3455566665554
No 86
>KOG2982|consensus
Probab=97.47 E-value=3.9e-05 Score=73.43 Aligned_cols=196 Identities=16% Similarity=0.047 Sum_probs=107.0
Q ss_pred CeEEcCCCCCCcCC---CCC--CccCcEEecCCCcceeecCCCcc-CCCCCCcEEeCCCCcceecCC-CcCCCcccCCcC
Q psy15407 97 TRVDCSQRGLKEIP---KDI--PLYTTELILNDNEIGKIKSDGLF-GRLPNLIKLDLRRNQVTGIED-NAFEGENDQGCL 169 (604)
Q Consensus 97 ~~l~cs~~~L~~iP---~~l--~~~~~~L~L~~N~i~~i~~~~~f-~~l~~L~~L~Ls~N~i~~i~~-~~f~~l~~L~~L 169 (604)
+.+|+..|.|+.-. .-+ .+.++.|+|+.|.+...-.. + ..+.+|+.|-|.+..+..-.. ..+..++.++.|
T Consensus 74 ~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~--lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtel 151 (418)
T KOG2982|consen 74 KELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKS--LPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTEL 151 (418)
T ss_pred hhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCcccc--CcccccceEEEEEcCCCCChhhhhhhhhcchhhhhh
Confidence 56777777766321 111 23457777777777432111 2 345677777777766543222 234456666666
Q ss_pred CCCCCCCCccccc--cEEEccCCccccccccccceeeeeeccccCCccccceeecCCCCceeecc-CCCCCCCCCCCeEE
Q psy15407 170 GDNYCPPKCTCTV--RVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLS-NFTFSPLSKLSQLI 246 (604)
Q Consensus 170 ~l~~~~~~~~~~l--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~i~~l~-~~~f~~l~~L~~L~ 246 (604)
.++.|....+..- -.-........+...............+...+| ++..+-+..+.|..+. ...+..++.+.-|+
T Consensus 152 HmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fp-nv~sv~v~e~PlK~~s~ek~se~~p~~~~Ln 230 (418)
T KOG2982|consen 152 HMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFP-NVNSVFVCEGPLKTESSEKGSEPFPSLSCLN 230 (418)
T ss_pred hhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcc-cchheeeecCcccchhhcccCCCCCcchhhh
Confidence 6665531100000 000001111122222222221111112222223 6666777788776654 34677788888999
Q ss_pred ecCCcceeeec-cccCCCCcccEEEccCCccccCCcc------cccCcccceeeec
Q psy15407 247 LSYNKLQCIDR-DALAGLKSLRIISLHGNDISMIPEG------AFADLHAITHLAI 295 (604)
Q Consensus 247 Ls~N~l~~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~~------~f~~l~~L~~L~L 295 (604)
|+.|+|.+... +++.++++|+-|.+++|.|..--.. .++.|++++.|+=
T Consensus 231 L~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNG 286 (418)
T KOG2982|consen 231 LGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNG 286 (418)
T ss_pred hcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEecC
Confidence 99999987643 7788899999999999988732211 3466777776653
No 87
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.47 E-value=0.00017 Score=73.86 Aligned_cols=52 Identities=15% Similarity=0.252 Sum_probs=33.9
Q ss_pred ccCcEEecCCCcceeecCCCccCCCCCCcEEeCCC-CcceecCCCcCCCcccCCcCCCCCC
Q psy15407 115 LYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRR-NQVTGIEDNAFEGENDQGCLGDNYC 174 (604)
Q Consensus 115 ~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~-N~i~~i~~~~f~~l~~L~~L~l~~~ 174 (604)
..++.|+++++.|+.+|. | ..+|+.|.|++ ++++.++. .+ ..+|+.|.+++|
T Consensus 52 ~~l~~L~Is~c~L~sLP~---L--P~sLtsL~Lsnc~nLtsLP~-~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 52 RASGRLYIKDCDIESLPV---L--PNELTEITIENCNNLTTLPG-SI--PEGLEKLTVCHC 104 (426)
T ss_pred cCCCEEEeCCCCCcccCC---C--CCCCcEEEccCCCCcccCCc-hh--hhhhhheEccCc
Confidence 345788898888888862 2 24688888887 55655543 22 245666666654
No 88
>KOG1909|consensus
Probab=97.43 E-value=1.3e-05 Score=78.30 Aligned_cols=67 Identities=21% Similarity=0.197 Sum_probs=29.4
Q ss_pred CCCCCCCCCeEEecCCcceeee----ccccCCCCcccEEEccCCccccCCcccc-----cCcccceeeeccCCCcc
Q psy15407 235 TFSPLSKLSQLILSYNKLQCID----RDALAGLKSLRIISLHGNDISMIPEGAF-----ADLHAITHLAIGGNPLY 301 (604)
Q Consensus 235 ~f~~l~~L~~L~Ls~N~l~~i~----~~~f~~l~~L~~L~Ls~N~l~~i~~~~f-----~~l~~L~~L~L~~Npl~ 301 (604)
.|...++|+.|||..|-++.-- ..++..+++|+.|+|++..|+.--..+| ...++|+.|.|.+|-+.
T Consensus 208 al~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 208 ALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred HHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 3444555555555555444311 2334444555555555554442211111 12344555555555443
No 89
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=97.36 E-value=0.00012 Score=89.32 Aligned_cols=58 Identities=16% Similarity=0.183 Sum_probs=48.5
Q ss_pred ccCceeeecchhhHHHHHHhCCccccCCCCcCCCCCcccccCcccccCCCCceeecCCC
Q psy15407 8 GINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGSNDYLCKCAP 66 (604)
Q Consensus 8 ~~np~~C~C~l~w~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~c~~~~ 66 (604)
..|||.|||+|+||.+|++++.+.. ..+....|..|..++|+.|.++..++|.|....
T Consensus 27 sgNPw~CDC~L~WL~~WL~~~~v~v-~~~~~i~CasP~~LrG~~L~~l~~~d~~C~~~y 84 (2740)
T TIGR00864 27 SGNPFECDCGLARLPRWAEEKGVKV-RQPEAALCAGPGALAGQPLLGIPLLDSGCDEEY 84 (2740)
T ss_pred eCCccccccccHHHHHHHHhcCccc-cCCcccCCCCChHHCCCCcccCCcccCCCCCcc
Confidence 5799999999999999999885432 224568899999999999999999998887443
No 90
>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium. Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.
Probab=97.30 E-value=0.00014 Score=64.57 Aligned_cols=124 Identities=27% Similarity=0.717 Sum_probs=72.4
Q ss_pred CCceEeeCCCCCc---CCCCCcCCCcCC-----CCCCCCCcEEEeCC-----CCeEEecCCCCCC--CCcccCCCcCCCC
Q psy15407 416 EGRFNCECAPGYT---GDRCEINIDDCL-----SHKCENNATCVDLI-----QAYECRCAPGFQG--EFCQTKTPFCAGE 480 (604)
Q Consensus 416 ~~~~~C~C~~g~~---g~~C~~~~~~C~-----~~~C~~~~~C~~~~-----~~~~C~C~~g~~g--~~C~~~~~~C~~~ 480 (604)
...|.|.|.+||. -..|| ...+|. ..+|...++|++.. ..|.|.|.+||.- ..|. ...|..
T Consensus 17 SNHfEC~Cnegfvl~~EntCE-~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~vCv--p~~C~~- 92 (197)
T PF06247_consen 17 SNHFECKCNEGFVLKNENTCE-EKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQGVCV--PNKCNN- 92 (197)
T ss_dssp SSEEEEEESTTEEEEETTEEE-E----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSSSEE--EGGGSS-
T ss_pred cCceEEEcCCCcEEccccccc-cceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCCeEc--hhhcCc-
Confidence 5678888888886 34566 333454 34688889998765 4699999999962 2342 233433
Q ss_pred CCCCCCCCceeecC---CCeEEecCCCCc---CCcCccc-CCCCCCCCCCCCCEEeeCCCCeEeeeCCCCccC
Q psy15407 481 YNPCRNGARCLDHF---SHYTCECTPGFS---GVNCTVN-VDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGK 546 (604)
Q Consensus 481 ~~~C~~~~~C~~~~---~~~~C~C~~g~~---g~~c~~~-~~~C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~ 546 (604)
..|. .|.|+-.+ ....|.|.-|+. +..|..+ ..+|.- .|..+-+|....+-|+|.|.+||.+.
T Consensus 93 -~~Cg-~GKCI~d~~~~~~~~CSC~IGkV~~dn~kCtk~G~T~C~L-KCk~nE~CK~~~~~Y~C~~~~~~~~~ 162 (197)
T PF06247_consen 93 -KDCG-SGKCILDPDNPNNPTCSCNIGKVPDDNKKCTKTGETKCSL-KCKENEECKLVDGYYKCVCKEGFPGD 162 (197)
T ss_dssp ----T-TEEEEEEEGGGSEEEEEE-TEEETTTTTESEEEE---------TTTEEEEEETTEEEEEE-TT-EEE
T ss_pred -eecC-CCeEEecCCCCCCceeEeeeceEeccCCcccCCCccceee-ecCCCcceeeeCcEEEeecCCCCCCC
Confidence 3566 56886432 345899999987 3334321 123332 47788899999999999999999755
No 91
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.
Probab=97.24 E-value=0.00049 Score=45.20 Aligned_cols=34 Identities=44% Similarity=1.233 Sum_probs=19.1
Q ss_pred CcCCC-CCCCCCcEEEeCCCCeEEecCCCCCCCCc
Q psy15407 437 DDCLS-HKCENNATCVDLIQAYECRCAPGFQGEFC 470 (604)
Q Consensus 437 ~~C~~-~~C~~~~~C~~~~~~~~C~C~~g~~g~~C 470 (604)
++|.. .+|.+++.|++..++|.|.|.+||.|..|
T Consensus 3 ~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C 37 (38)
T cd00054 3 DECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNC 37 (38)
T ss_pred ccCCCCCCcCCCCEeECCCCCeEeECCCCCcCCcC
Confidence 44444 45555556666556666666666665544
No 92
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=97.18 E-value=0.00058 Score=44.14 Aligned_cols=30 Identities=40% Similarity=1.032 Sum_probs=23.1
Q ss_pred CCCCCCCCEEeeCCCCeEeeeCCCCccC-CC
Q psy15407 519 NHMCQNGGTCVDGINDYTCKCEGDFVGK-FC 548 (604)
Q Consensus 519 ~~~C~~~~~C~~~~~~y~C~C~~G~~G~-~C 548 (604)
..+|.+++.|++..++|+|.|+.||.|. .|
T Consensus 5 ~~~C~~~~~C~~~~~~~~C~C~~g~~g~~~C 35 (36)
T cd00053 5 SNPCSNGGTCVNTPGSYRCVCPPGYTGDRSC 35 (36)
T ss_pred CCCCCCCCEEecCCCCeEeECCCCCcccCCc
Confidence 4567777888888788888888888877 54
No 93
>smart00181 EGF Epidermal growth factor-like domain.
Probab=97.14 E-value=0.00067 Score=43.80 Aligned_cols=28 Identities=43% Similarity=1.063 Sum_probs=22.4
Q ss_pred CCCCCCCEEeeCCCCeEeeeCCCCcc-CCC
Q psy15407 520 HMCQNGGTCVDGINDYTCKCEGDFVG-KFC 548 (604)
Q Consensus 520 ~~C~~~~~C~~~~~~y~C~C~~G~~G-~~C 548 (604)
.+|.++ .|++..++|+|.|++||.| ..|
T Consensus 6 ~~C~~~-~C~~~~~~~~C~C~~g~~g~~~C 34 (35)
T smart00181 6 GPCSNG-TCINTPGSYTCSCPPGYTGDKRC 34 (35)
T ss_pred CCCCCC-EEECCCCCeEeECCCCCccCCcc
Confidence 477777 8888888888888888888 655
No 94
>KOG2123|consensus
Probab=97.10 E-value=1.5e-05 Score=75.43 Aligned_cols=58 Identities=29% Similarity=0.350 Sum_probs=30.7
Q ss_pred ceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeec-cccCCCCcccEEEccCCccc
Q psy15407 218 TMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDR-DALAGLKSLRIISLHGNDIS 277 (604)
Q Consensus 218 L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~Ls~N~l~ 277 (604)
|+.|.||-|+|+.+.+ |...++|++|+|..|.|..|.. .-+.+|++|+.|.|..|.-.
T Consensus 43 lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ENPCc 101 (388)
T KOG2123|consen 43 LEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLDENPCC 101 (388)
T ss_pred ceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhccCCcc
Confidence 3344444444444432 4445556666666666555533 23456666677776666543
No 95
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=97.00 E-value=0.00028 Score=34.28 Aligned_cols=13 Identities=38% Similarity=1.288 Sum_probs=11.0
Q ss_pred eeecCCCCcCCCC
Q psy15407 584 LCKCAPGYSGKES 596 (604)
Q Consensus 584 ~C~C~~G~~G~~C 596 (604)
+|+|++||+|++|
T Consensus 1 ~C~C~~G~~G~~C 13 (13)
T PF12661_consen 1 TCQCPPGWTGPNC 13 (13)
T ss_dssp EEEE-TTEETTTT
T ss_pred CccCcCCCcCCCC
Confidence 4999999999988
No 96
>smart00181 EGF Epidermal growth factor-like domain.
Probab=96.97 E-value=0.0011 Score=42.80 Aligned_cols=29 Identities=41% Similarity=1.082 Sum_probs=23.9
Q ss_pred CCCCCCceeCCCCCCCeeeecCCCCcC-CCCC
Q psy15407 567 HDCKNGICFQPQGSNDYLCKCAPGYSG-KESL 597 (604)
Q Consensus 567 ~~C~~g~C~~~~g~~~~~C~C~~G~~G-~~C~ 597 (604)
..|.++.|++.. ++|+|.|++||.| +.|+
T Consensus 6 ~~C~~~~C~~~~--~~~~C~C~~g~~g~~~C~ 35 (35)
T smart00181 6 GPCSNGTCINTP--GSYTCSCPPGYTGDKRCE 35 (35)
T ss_pred CCCCCCEEECCC--CCeEeECCCCCccCCccC
Confidence 456665799887 8899999999999 8875
No 97
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=96.89 E-value=0.00057 Score=44.16 Aligned_cols=26 Identities=31% Similarity=0.822 Sum_probs=14.2
Q ss_pred CCCCCCEEeeCCCCeEeeeCCCCccC
Q psy15407 521 MCQNGGTCVDGINDYTCKCEGDFVGK 546 (604)
Q Consensus 521 ~C~~~~~C~~~~~~y~C~C~~G~~G~ 546 (604)
.|+.+++|++..++|+|.|++||.|+
T Consensus 7 ~C~~nA~C~~~~~~~~C~C~~Gy~Gd 32 (36)
T PF12947_consen 7 GCHPNATCTNTGGSYTCTCKPGYEGD 32 (36)
T ss_dssp GS-TTCEEEE-TTSEEEEE-CEEECC
T ss_pred CCCCCcEeecCCCCEEeECCCCCccC
Confidence 45566666666666666666666654
No 98
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=96.83 E-value=0.00074 Score=43.63 Aligned_cols=32 Identities=34% Similarity=0.887 Sum_probs=25.0
Q ss_pred CCCCCCCCCCCCceeecCCCeEEecCCCCcCC
Q psy15407 477 CAGEYNPCRNGARCLDHFSHYTCECTPGFSGV 508 (604)
Q Consensus 477 C~~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~ 508 (604)
|....+.|..++.|+++.++|.|.|.+||.|+
T Consensus 1 C~~~~~~C~~nA~C~~~~~~~~C~C~~Gy~Gd 32 (36)
T PF12947_consen 1 CLENNGGCHPNATCTNTGGSYTCTCKPGYEGD 32 (36)
T ss_dssp TTTGGGGS-TTCEEEE-TTSEEEEE-CEEECC
T ss_pred CCCCCCCCCCCcEeecCCCCEEeECCCCCccC
Confidence 34456789999999999999999999999984
No 99
>KOG2739|consensus
Probab=96.82 E-value=0.00067 Score=64.30 Aligned_cols=82 Identities=22% Similarity=0.267 Sum_probs=57.9
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCC--cceeeeccccCCCCcccEEEccCCccccCCc-ccccCcccceee
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYN--KLQCIDRDALAGLKSLRIISLHGNDISMIPE-GAFADLHAITHL 293 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N--~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L 293 (604)
.|+.|.+.+-.++.+.. |-.|++|++|.||.| ++..--.-....+++|++|+|++|+|+.+.. .-+..+.+|..|
T Consensus 44 ~le~ls~~n~gltt~~~--~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~L 121 (260)
T KOG2739|consen 44 ELELLSVINVGLTTLTN--FPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSL 121 (260)
T ss_pred chhhhhhhccceeeccc--CCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhhh
Confidence 56666777777776653 667899999999999 5543222223445999999999999884321 125667788888
Q ss_pred eccCCCc
Q psy15407 294 AIGGNPL 300 (604)
Q Consensus 294 ~L~~Npl 300 (604)
++..++.
T Consensus 122 dl~n~~~ 128 (260)
T KOG2739|consen 122 DLFNCSV 128 (260)
T ss_pred hcccCCc
Confidence 9888754
No 100
>KOG3512|consensus
Probab=96.77 E-value=0.0093 Score=60.44 Aligned_cols=103 Identities=18% Similarity=0.359 Sum_probs=56.1
Q ss_pred eEEe-cCCCCcCCcCc--ccCCCCCCCCCCC----CCEEeeCCCCeEeeeCCCCccCCCCcCcccccCCC-CCCCCCCCC
Q psy15407 497 YTCE-CTPGFSGVNCT--VNVDDCVNHMCQN----GGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYP-QTSPCQHHD 568 (604)
Q Consensus 497 ~~C~-C~~g~~g~~c~--~~~~~C~~~~C~~----~~~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~~-~~~~C~~~~ 568 (604)
-+|. |.+||+.+.-. .+...|..-.|++ |.+|..+.| +|.|.+|-+|.+|..+........ ...+|...+
T Consensus 371 rhChyCreGyyRd~s~pl~hrkaCk~CdChpVGs~gktCNq~tG--qCpCkeGvtG~tCnrCa~gyqqsrs~vapcik~p 448 (592)
T KOG3512|consen 371 RHCHYCREGYYRDGSKPLTHRKACKACDCHPVGSAGKTCNQTTG--QCPCKEGVTGLTCNRCAPGYQQSRSPVAPCIKIP 448 (592)
T ss_pred cccccccCccccCCCCCCchhhhhhhcCCcccccccccccccCC--cccCCCCCcccccccccchhhcccCCCcCceecC
Confidence 3463 78888643322 1233344434443 346665656 899999999999887643221111 122332211
Q ss_pred CCC-CceeCCCCCCCeeeecCCCCcCCCCCCCcc
Q psy15407 569 CKN-GICFQPQGSNDYLCKCAPGYSGKESLLQQT 601 (604)
Q Consensus 569 C~~-g~C~~~~g~~~~~C~C~~G~~G~~C~~~~~ 601 (604)
=.. -.+.+.....++.+.|+.++.|.+++.+..
T Consensus 449 ~~~~~~~~s~ve~qd~~s~Ck~~~~~~r~n~kkf 482 (592)
T KOG3512|consen 449 TDAPTLGSSGVEPQDQCSKCKASPGGKRLNQKKF 482 (592)
T ss_pred CCCccccCCCCcchhccccCCCCCcceecccccc
Confidence 101 112222222567789999999999987654
No 101
>KOG2123|consensus
Probab=96.76 E-value=6.9e-05 Score=71.07 Aligned_cols=80 Identities=21% Similarity=0.227 Sum_probs=68.8
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCc-ccccCcccceeeec
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPE-GAFADLHAITHLAI 295 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~L 295 (604)
+.++|++-+..|+.|. ....++.|+.|.||-|+|+++. .|...++|++|.|..|.|..|.+ .-+.+|++|+.|.|
T Consensus 20 ~vkKLNcwg~~L~DIs--ic~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL 95 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDIS--ICEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWL 95 (388)
T ss_pred HhhhhcccCCCccHHH--HHHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhh
Confidence 5667888888888775 4567999999999999999995 47888999999999999999876 33578999999999
Q ss_pred cCCCc
Q psy15407 296 GGNPL 300 (604)
Q Consensus 296 ~~Npl 300 (604)
..||-
T Consensus 96 ~ENPC 100 (388)
T KOG2123|consen 96 DENPC 100 (388)
T ss_pred ccCCc
Confidence 99994
No 102
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=96.69 E-value=0.0029 Score=40.78 Aligned_cols=27 Identities=41% Similarity=1.121 Sum_probs=14.8
Q ss_pred CCCCCCcEEEeCCCCeEEecCCCCCCC
Q psy15407 442 HKCENNATCVDLIQAYECRCAPGFQGE 468 (604)
Q Consensus 442 ~~C~~~~~C~~~~~~~~C~C~~g~~g~ 468 (604)
.+|.+++.|++..+.|.|.|+.||.|.
T Consensus 6 ~~C~~~~~C~~~~~~~~C~C~~g~~g~ 32 (36)
T cd00053 6 NPCSNGGTCVNTPGSYRCVCPPGYTGD 32 (36)
T ss_pred CCCCCCCEEecCCCCeEeECCCCCccc
Confidence 345555555555555555555555554
No 103
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins
Probab=96.54 E-value=0.0036 Score=39.23 Aligned_cols=26 Identities=35% Similarity=0.997 Sum_probs=18.8
Q ss_pred CCCCCCEEeeCCCCeEeeeCCCCccCCC
Q psy15407 521 MCQNGGTCVDGINDYTCKCEGDFVGKFC 548 (604)
Q Consensus 521 ~C~~~~~C~~~~~~y~C~C~~G~~G~~C 548 (604)
.|+++|+|+...+ +|.|.+||+|..|
T Consensus 7 ~C~~~G~C~~~~g--~C~C~~g~~G~~C 32 (32)
T PF07974_consen 7 ICSGHGTCVSPCG--RCVCDSGYTGPDC 32 (32)
T ss_pred ccCCCCEEeCCCC--EEECCCCCcCCCC
Confidence 5777788875533 7888888888765
No 104
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.48 E-value=0.0015 Score=37.20 Aligned_cols=21 Identities=43% Similarity=0.575 Sum_probs=13.8
Q ss_pred CCcEEeCCCCcceecCCCcCCC
Q psy15407 141 NLIKLDLRRNQVTGIEDNAFEG 162 (604)
Q Consensus 141 ~L~~L~Ls~N~i~~i~~~~f~~ 162 (604)
+|++|||++|+|+.|++. |.+
T Consensus 1 ~L~~Ldls~n~l~~ip~~-~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSS-FSN 21 (22)
T ss_dssp TESEEEETSSEESEEGTT-TTT
T ss_pred CccEEECCCCcCEeCChh-hcC
Confidence 466777777777766665 554
No 105
>KOG3665|consensus
Probab=96.37 E-value=0.00084 Score=74.69 Aligned_cols=82 Identities=21% Similarity=0.203 Sum_probs=49.7
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceee-eccccCCCCcccEEEccCCccccCCc------ccccCccc
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCI-DRDALAGLKSLRIISLHGNDISMIPE------GAFADLHA 289 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i-~~~~f~~l~~L~~L~Ls~N~l~~i~~------~~f~~l~~ 289 (604)
+|..||+|+.+|+.+ ..++.|.+|+.|.+.+=.+..- .-..+..|++|++||+|..+....+. +-...|++
T Consensus 174 NL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~Lpe 251 (699)
T KOG3665|consen 174 NLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPE 251 (699)
T ss_pred ccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCcc
Confidence 777777777777766 3466677777777766555441 11234457777777777665443331 11234677
Q ss_pred ceeeeccCCCc
Q psy15407 290 ITHLAIGGNPL 300 (604)
Q Consensus 290 L~~L~L~~Npl 300 (604)
|+.||.++..+
T Consensus 252 LrfLDcSgTdi 262 (699)
T KOG3665|consen 252 LRFLDCSGTDI 262 (699)
T ss_pred ccEEecCCcch
Confidence 77777776544
No 106
>KOG1218|consensus
Probab=96.31 E-value=0.39 Score=48.68 Aligned_cols=191 Identities=29% Similarity=0.659 Sum_probs=94.5
Q ss_pred CCCCcCCCCcccCCCCCCCCCCCCCeeeeCCCCceEeeCCCCCcCCCCCc---CCCcCCCCCCCCCcEEEeCCCCeEEec
Q psy15407 385 TPGYHGQHCEFMIDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEI---NIDDCLSHKCENNATCVDLIQAYECRC 461 (604)
Q Consensus 385 ~~g~~G~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~g~~C~~---~~~~C~~~~C~~~~~C~~~~~~~~C~C 461 (604)
..+|.|..|+.+ .+|... |.. .+|..... .|.+..+|.+..|.. ....|... |.+.+.+ ......|.|
T Consensus 96 ~~~~~g~~C~~~-~~~~~~-c~~-~~C~~~~~---~c~~~~~~~~~~C~~~~~~g~~C~~~-c~~~~~~--~~~~~~c~c 166 (316)
T KOG1218|consen 96 LNGYEGPQCESP-CPCGDG-CAE-KTCANPRR---ECRCGGGYIGEQCGEENLVGLKCQRD-CQCTGGC--DCKNGICTC 166 (316)
T ss_pred CCCCCcccccCC-CCcCCc-ccc-cccCCCcc---ceecCCcCccccccccCCCCCCccCC-CCCcccc--CCCCCceec
Confidence 688999999743 233222 333 34543211 577777777777753 11122211 1111122 122345889
Q ss_pred CCCCCCCCcccCCCcCCCCCCCCCCCCceeecCCCeEEecCCCC--------cCCcCcccCCCCCCCCCCCCCEEeeCCC
Q psy15407 462 APGFQGEFCQTKTPFCAGEYNPCRNGARCLDHFSHYTCECTPGF--------SGVNCTVNVDDCVNHMCQNGGTCVDGIN 533 (604)
Q Consensus 462 ~~g~~g~~C~~~~~~C~~~~~~C~~~~~C~~~~~~~~C~C~~g~--------~g~~c~~~~~~C~~~~C~~~~~C~~~~~ 533 (604)
.+||.|..|......|.. ...|.+++.|....+. +.+.+++ .|..|.. . ..|..+..+.+...
T Consensus 167 ~~g~~g~~~~~~~~~c~~-~~~~~~g~~C~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~-----~~c~~~~~~~~~~~ 237 (316)
T KOG1218|consen 167 QPGFVGVFCVESCSGCSP-LTACENGAKCNRSTGS--CLCYPGPSGACKGGFHGCACLR-M-----CDCNEGYPCVNDCG 237 (316)
T ss_pred cCCcccccccccCCCcCC-CcccCCCCeeeccccc--cccCCCCcccccCCccCCcCcc-c-----ccccCCCcccCCcC
Confidence 999999998755443442 3467777788665443 4444444 3333321 1 12344444433111
Q ss_pred CeEeeeCCCCccCCCCcCcccccCCCCCCCC-CCCCCCCCc-eeCCCCCCCeeeecCCCCcCCCCCCCc
Q psy15407 534 DYTCKCEGDFVGKFCEIAPFVAMMYPQTSPC-QHHDCKNGI-CFQPQGSNDYLCKCAPGYSGKESLLQQ 600 (604)
Q Consensus 534 ~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C-~~~~C~~g~-C~~~~g~~~~~C~C~~G~~G~~C~~~~ 600 (604)
.-.|.+..++.+..+......... ...| ....|.+|. +.-..+ .|.|.+||.+..++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~c~c~~g~~~~~~~~----~~~~~~~~~~~~~~~~~ 299 (316)
T KOG1218|consen 238 PGICGCVLGEGETVCLRERPKGSL---GGSCFQRCQCGGGLVCRPGKG----SCRCSPGAALATCQKIC 299 (316)
T ss_pred CceeEeCcccccccccccCcccee---cCccccceeeCCCCccccccc----cccCCCccccccccccc
Confidence 225666666654444332111111 1111 122344444 444333 48888888888876543
No 107
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=96.15 E-value=0.003 Score=37.62 Aligned_cols=23 Identities=48% Similarity=0.787 Sum_probs=20.9
Q ss_pred CCCCcEEeCCCCcceecCCCcCC
Q psy15407 139 LPNLIKLDLRRNQVTGIEDNAFE 161 (604)
Q Consensus 139 l~~L~~L~Ls~N~i~~i~~~~f~ 161 (604)
|++|++|+|++|+|+.|++++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 57899999999999999999886
No 108
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=96.15 E-value=0.003 Score=37.62 Aligned_cols=23 Identities=48% Similarity=0.787 Sum_probs=20.9
Q ss_pred CCCCcEEeCCCCcceecCCCcCC
Q psy15407 139 LPNLIKLDLRRNQVTGIEDNAFE 161 (604)
Q Consensus 139 l~~L~~L~Ls~N~i~~i~~~~f~ 161 (604)
|++|++|+|++|+|+.|++++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 57899999999999999999886
No 109
>KOG1218|consensus
Probab=96.15 E-value=0.15 Score=51.70 Aligned_cols=153 Identities=29% Similarity=0.625 Sum_probs=81.6
Q ss_pred ceeeeCCCCCcCCCCcccCCC-CCCCCCCCCCeeeeC-CCCceEeeC-CCCCcCCCCCcCCCcCCCCCCCCCcEEEeCCC
Q psy15407 379 QYQCRCTPGYHGQHCEFMIDA-CYGNPCRNSGTCKLL-EEGRFNCEC-APGYTGDRCEINIDDCLSHKCENNATCVDLIQ 455 (604)
Q Consensus 379 ~~~C~C~~g~~G~~c~~~~~~-C~~~~C~~~~~C~~~-~~~~~~C~C-~~g~~g~~C~~~~~~C~~~~C~~~~~C~~~~~ 455 (604)
...|.+..+|.|..|+..... .....|...+.|... ........| ..+|.|..|+. ..+|... |.. .+|.+...
T Consensus 48 ~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~g~~C~~-~~~~~~~-c~~-~~C~~~~~ 124 (316)
T KOG1218|consen 48 SGECGLGYGFVGSVCRIECVCGNAGGGCSQPCRCKNGGTCVSSTGYCHLNGYEGPQCES-PCPCGDG-CAE-KTCANPRR 124 (316)
T ss_pred ceeEecccccCCCccccccccCCCCCcccCccccCCCCcccCCCCcccCCCCCcccccC-CCCcCCc-ccc-cccCCCcc
Confidence 457888888888876532211 112223333333221 011223344 68888988873 3344332 333 45544332
Q ss_pred CeEEecCCCCCCCCccc---CCCcCCCCCCCCCCCCceeecCCCeEEecCCCCcCCcCcccCCCCC-CCCCCCCCEEeeC
Q psy15407 456 AYECRCAPGFQGEFCQT---KTPFCAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCTVNVDDCV-NHMCQNGGTCVDG 531 (604)
Q Consensus 456 ~~~C~C~~g~~g~~C~~---~~~~C~~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~c~~~~~~C~-~~~C~~~~~C~~~ 531 (604)
.|.+..+|.+..|.. ....|.. .|.....+. .....|.|.+||.|..|......|. ...|.+++.|...
T Consensus 125 --~c~~~~~~~~~~C~~~~~~g~~C~~---~c~~~~~~~--~~~~~c~c~~g~~g~~~~~~~~~c~~~~~~~~g~~C~~~ 197 (316)
T KOG1218|consen 125 --ECRCGGGYIGEQCGEENLVGLKCQR---DCQCTGGCD--CKNGICTCQPGFVGVFCVESCSGCSPLTACENGAKCNRS 197 (316)
T ss_pred --ceecCCcCccccccccCCCCCCccC---CCCCccccC--CCCCceeccCCcccccccccCCCcCCCcccCCCCeeecc
Confidence 577777777777754 1223332 121111221 1234689999999999975444355 3467777899876
Q ss_pred CCCeEeeeCCCC
Q psy15407 532 INDYTCKCEGDF 543 (604)
Q Consensus 532 ~~~y~C~C~~G~ 543 (604)
.+ .+.+.+++
T Consensus 198 ~~--~~~~~~~~ 207 (316)
T KOG1218|consen 198 TG--SCLCYPGP 207 (316)
T ss_pred cc--ccccCCCC
Confidence 65 34444444
No 110
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins
Probab=96.15 E-value=0.0075 Score=37.78 Aligned_cols=26 Identities=27% Similarity=0.876 Sum_probs=19.6
Q ss_pred CCCCCCceeecCCCeEEecCCCCcCCcC
Q psy15407 483 PCRNGARCLDHFSHYTCECTPGFSGVNC 510 (604)
Q Consensus 483 ~C~~~~~C~~~~~~~~C~C~~g~~g~~c 510 (604)
.|.++|+|+.. ..+|.|.+||+|..|
T Consensus 7 ~C~~~G~C~~~--~g~C~C~~g~~G~~C 32 (32)
T PF07974_consen 7 ICSGHGTCVSP--CGRCVCDSGYTGPDC 32 (32)
T ss_pred ccCCCCEEeCC--CCEEECCCCCcCCCC
Confidence 57788888754 357888888888765
No 111
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.15 E-value=0.0036 Score=35.60 Aligned_cols=14 Identities=50% Similarity=0.420 Sum_probs=5.8
Q ss_pred CCeEEecCCcceee
Q psy15407 242 LSQLILSYNKLQCI 255 (604)
Q Consensus 242 L~~L~Ls~N~l~~i 255 (604)
|++|+|++|+|+.|
T Consensus 2 L~~Ldls~n~l~~i 15 (22)
T PF00560_consen 2 LEYLDLSGNNLTSI 15 (22)
T ss_dssp ESEEEETSSEESEE
T ss_pred ccEEECCCCcCEeC
Confidence 33444444444433
No 112
>KOG2120|consensus
Probab=96.14 E-value=5.1e-05 Score=72.67 Aligned_cols=58 Identities=19% Similarity=0.076 Sum_probs=34.6
Q ss_pred CCCCCCeEEecCCc-ceeeeccccCCCCcccEEEccCCccccCCccc---ccCcccceeeeccC
Q psy15407 238 PLSKLSQLILSYNK-LQCIDRDALAGLKSLRIISLHGNDISMIPEGA---FADLHAITHLAIGG 297 (604)
Q Consensus 238 ~l~~L~~L~Ls~N~-l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~---f~~l~~L~~L~L~~ 297 (604)
..++|..||||++. |+.--..+|..++.|++|.|+... .|++.. |...++|.+|++.+
T Consensus 311 rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY--~i~p~~~~~l~s~psl~yLdv~g 372 (419)
T KOG2120|consen 311 RCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCY--DIIPETLLELNSKPSLVYLDVFG 372 (419)
T ss_pred hCCceeeeccccccccCchHHHHHHhcchheeeehhhhc--CCChHHeeeeccCcceEEEEecc
Confidence 46778888887764 332112345566777877776554 334432 45566777777665
No 113
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=96.10 E-value=0.0034 Score=30.52 Aligned_cols=12 Identities=33% Similarity=1.124 Sum_probs=6.8
Q ss_pred eeeCCCCccCCC
Q psy15407 537 CKCEGDFVGKFC 548 (604)
Q Consensus 537 C~C~~G~~G~~C 548 (604)
|.|++||+|.+|
T Consensus 2 C~C~~G~~G~~C 13 (13)
T PF12661_consen 2 CQCPPGWTGPNC 13 (13)
T ss_dssp EEE-TTEETTTT
T ss_pred ccCcCCCcCCCC
Confidence 666666666654
No 114
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.99 E-value=0.0043 Score=36.94 Aligned_cols=23 Identities=43% Similarity=0.751 Sum_probs=16.8
Q ss_pred CCcccEEEccCCccccCCccccc
Q psy15407 263 LKSLRIISLHGNDISMIPEGAFA 285 (604)
Q Consensus 263 l~~L~~L~Ls~N~l~~i~~~~f~ 285 (604)
|++|+.|+|++|+|+.||+++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 45677777777777777777664
No 115
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.99 E-value=0.0043 Score=36.94 Aligned_cols=23 Identities=43% Similarity=0.751 Sum_probs=16.8
Q ss_pred CCcccEEEccCCccccCCccccc
Q psy15407 263 LKSLRIISLHGNDISMIPEGAFA 285 (604)
Q Consensus 263 l~~L~~L~Ls~N~l~~i~~~~f~ 285 (604)
|++|+.|+|++|+|+.||+++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 45677777777777777777664
No 116
>KOG3665|consensus
Probab=95.98 E-value=0.0029 Score=70.49 Aligned_cols=58 Identities=14% Similarity=0.219 Sum_probs=32.5
Q ss_pred CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCcccCCcCCCCC
Q psy15407 114 PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNY 173 (604)
Q Consensus 114 ~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~l~~ 173 (604)
.+.++.|.+.+-.+..-.-..++.++++|..||+|+-+|+.+ ...+.|.+|+.|.+.+
T Consensus 147 LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrn 204 (699)
T KOG3665|consen 147 LPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRN 204 (699)
T ss_pred CcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccC
Confidence 345566666665553221112356677777777777777766 3345555555554443
No 117
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=95.49 E-value=0.00084 Score=63.71 Aligned_cols=187 Identities=18% Similarity=0.157 Sum_probs=106.0
Q ss_pred CCCCCCeeCCCeEEcCCCCCC-cCCCCC------CccCcEEecCCCcceeecCCC------------ccCCCCCCcEEeC
Q psy15407 87 ACPSGCSCDGTRVDCSQRGLK-EIPKDI------PLYTTELILNDNEIGKIKSDG------------LFGRLPNLIKLDL 147 (604)
Q Consensus 87 ~CP~~C~C~~~~l~cs~~~L~-~iP~~l------~~~~~~L~L~~N~i~~i~~~~------------~f~~l~~L~~L~L 147 (604)
.||.. ..|++|.|.+. ..|..+ ...++.|.|++|.+..+.... -...-|.|+.++.
T Consensus 90 kcp~l-----~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vic 164 (388)
T COG5238 90 KCPRL-----QKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVIC 164 (388)
T ss_pred cCCcc-----eeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEe
Confidence 57776 78888888876 445433 234478888888876553211 0234577888888
Q ss_pred CCCcceecCCC----cCCCcccCCcCCCCCCCCCccccccEEEccCCccccccccccceeeeeeccccCCccccceeecC
Q psy15407 148 RRNQVTGIEDN----AFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDL 223 (604)
Q Consensus 148 s~N~i~~i~~~----~f~~l~~L~~L~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L 223 (604)
..|++..-+.. .|..-.+|+.+.+..|.+.- + ....+...-.....+|+.|||
T Consensus 165 grNRlengs~~~~a~~l~sh~~lk~vki~qNgIrp--------------e---------gv~~L~~~gl~y~~~LevLDl 221 (388)
T COG5238 165 GRNRLENGSKELSAALLESHENLKEVKIQQNGIRP--------------E---------GVTMLAFLGLFYSHSLEVLDL 221 (388)
T ss_pred ccchhccCcHHHHHHHHHhhcCceeEEeeecCcCc--------------c---------hhHHHHHHHHHHhCcceeeec
Confidence 88877654322 12211223322222221100 0 000000000112247889999
Q ss_pred CCCceeecc----CCCCCCCCCCCeEEecCCcceeeeccc----cC--CCCcccEEEccCCcccc-------CCcccccC
Q psy15407 224 SNNQIGFLS----NFTFSPLSKLSQLILSYNKLQCIDRDA----LA--GLKSLRIISLHGNDISM-------IPEGAFAD 286 (604)
Q Consensus 224 s~N~i~~l~----~~~f~~l~~L~~L~Ls~N~l~~i~~~~----f~--~l~~L~~L~Ls~N~l~~-------i~~~~f~~ 286 (604)
..|.++... ..++..++.|+.|.|...-++.-...+ |. ..++|..|-+.+|.+.. ++.-.-..
T Consensus 222 qDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~ 301 (388)
T COG5238 222 QDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDA 301 (388)
T ss_pred cccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcc
Confidence 999887643 345566777899999888776543222 22 34788888888887651 12111245
Q ss_pred cccceeeeccCCCcc
Q psy15407 287 LHAITHLAIGGNPLY 301 (604)
Q Consensus 287 l~~L~~L~L~~Npl~ 301 (604)
++-|..|.+.||.+.
T Consensus 302 ~p~L~~le~ngNr~~ 316 (388)
T COG5238 302 VPLLVDLERNGNRIK 316 (388)
T ss_pred cHHHHHHHHccCcch
Confidence 677888888999886
No 118
>PF12662 cEGF: Complement Clr-like EGF-like
Probab=95.48 E-value=0.013 Score=33.89 Aligned_cols=10 Identities=60% Similarity=1.766 Sum_probs=5.4
Q ss_pred eEEecCCCCc
Q psy15407 497 YTCECTPGFS 506 (604)
Q Consensus 497 ~~C~C~~g~~ 506 (604)
|+|.|++||.
T Consensus 2 y~C~C~~Gy~ 11 (24)
T PF12662_consen 2 YTCSCPPGYQ 11 (24)
T ss_pred EEeeCCCCCc
Confidence 4555555554
No 119
>KOG0473|consensus
Probab=95.41 E-value=0.0004 Score=64.34 Aligned_cols=82 Identities=21% Similarity=0.203 Sum_probs=72.6
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCcceeeeccccCCCCcccEEEccCCccccCCcccccCcccceeeecc
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIG 296 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 296 (604)
..+.|||+.|++..+.. .|+-++.|..|+|+.|.|..++ ..|..+..++.+++..|.++.+|. .|..++.++.+++.
T Consensus 43 r~tvld~~s~r~vn~~~-n~s~~t~~~rl~~sknq~~~~~-~d~~q~~e~~~~~~~~n~~~~~p~-s~~k~~~~k~~e~k 119 (326)
T KOG0473|consen 43 RVTVLDLSSNRLVNLGK-NFSILTRLVRLDLSKNQIKFLP-KDAKQQRETVNAASHKNNHSQQPK-SQKKEPHPKKNEQK 119 (326)
T ss_pred eeeeehhhhhHHHhhcc-chHHHHHHHHHhccHhhHhhCh-hhHHHHHHHHHHHhhccchhhCCc-cccccCCcchhhhc
Confidence 67789999999988865 5788899999999999999994 567888999999999999999987 58999999999999
Q ss_pred CCCcc
Q psy15407 297 GNPLY 301 (604)
Q Consensus 297 ~Npl~ 301 (604)
+|+|.
T Consensus 120 ~~~~~ 124 (326)
T KOG0473|consen 120 KTEFF 124 (326)
T ss_pred cCcch
Confidence 99964
No 120
>PF12662 cEGF: Complement Clr-like EGF-like
Probab=95.23 E-value=0.017 Score=33.36 Aligned_cols=10 Identities=50% Similarity=1.700 Sum_probs=4.9
Q ss_pred eEeeCCCCCc
Q psy15407 419 FNCECAPGYT 428 (604)
Q Consensus 419 ~~C~C~~g~~ 428 (604)
|.|.|++||.
T Consensus 2 y~C~C~~Gy~ 11 (24)
T PF12662_consen 2 YTCSCPPGYQ 11 (24)
T ss_pred EEeeCCCCCc
Confidence 4455555554
No 121
>smart00051 DSL delta serrate ligand.
Probab=95.21 E-value=0.028 Score=41.54 Aligned_cols=46 Identities=22% Similarity=0.559 Sum_probs=30.7
Q ss_pred CeEeeeCCCCccCCCCcCcccccCCCCCCCCCC-CCCCCCc-eeCCCCCCCeeeecCCCCcCCCC
Q psy15407 534 DYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQH-HDCKNGI-CFQPQGSNDYLCKCAPGYSGKES 596 (604)
Q Consensus 534 ~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C~~-~~C~~g~-C~~~~g~~~~~C~C~~G~~G~~C 596 (604)
.|+-.|+++|.|..|+.. |.. .++..+. |.. .|. |+|.+||+|..|
T Consensus 16 ~~rv~C~~~~yG~~C~~~------------C~~~~d~~~~~~Cd~-~G~----~~C~~Gw~G~~C 63 (63)
T smart00051 16 QIRVTCDENYYGEGCNKF------------CRPRDDFFGHYTCDE-NGN----KGCLEGWMGPYC 63 (63)
T ss_pred EEEeeCCCCCcCCccCCE------------eCcCccccCCccCCc-CCC----EecCCCCcCCCC
Confidence 345579999999999753 221 1222333 754 443 999999999987
No 122
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=95.20 E-value=0.0022 Score=60.94 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=45.3
Q ss_pred cceeecCCCCceeeccC----CCCCCCCCCCeEEecCCcceee--ec---cccCCCCcccEEEccCCccccCCc----cc
Q psy15407 217 STMYRDLSNNQIGFLSN----FTFSPLSKLSQLILSYNKLQCI--DR---DALAGLKSLRIISLHGNDISMIPE----GA 283 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~----~~f~~l~~L~~L~Ls~N~l~~i--~~---~~f~~l~~L~~L~Ls~N~l~~i~~----~~ 283 (604)
.|+.++...|++..-+. ..|..-..|+++.+..|.|+.- .- ..+..+.+|++|||..|-++..-. .+
T Consensus 158 ~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~a 237 (388)
T COG5238 158 KLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADA 237 (388)
T ss_pred CceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHH
Confidence 66677777777655332 2233345677777777766532 11 112234677777777777764322 23
Q ss_pred ccCcccceeeecc
Q psy15407 284 FADLHAITHLAIG 296 (604)
Q Consensus 284 f~~l~~L~~L~L~ 296 (604)
+..++.|+.|.|.
T Consensus 238 l~~W~~lrEL~ln 250 (388)
T COG5238 238 LCEWNLLRELRLN 250 (388)
T ss_pred hcccchhhhcccc
Confidence 4455566666665
No 123
>PHA02887 EGF-like protein; Provisional
Probab=95.17 E-value=0.019 Score=46.71 Aligned_cols=33 Identities=27% Similarity=0.583 Sum_probs=28.5
Q ss_pred CCCCCCceeCCCCCCCeeeecCCCCcCCCCCCC
Q psy15407 567 HDCKNGICFQPQGSNDYLCKCAPGYSGKESLLQ 599 (604)
Q Consensus 567 ~~C~~g~C~~~~g~~~~~C~C~~G~~G~~C~~~ 599 (604)
+-|-||.|.-......+.|.|+.||+|.+||..
T Consensus 92 ~YCiHG~C~yI~dL~epsCrC~~GYtG~RCE~v 124 (126)
T PHA02887 92 DFCINGECMNIIDLDEKFCICNKGYTGIRCDEV 124 (126)
T ss_pred CEeeCCEEEccccCCCceeECCCCcccCCCCcc
Confidence 458889998877767899999999999999864
No 124
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.15 E-value=0.012 Score=31.02 Aligned_cols=15 Identities=27% Similarity=0.572 Sum_probs=6.0
Q ss_pred cccEEEccCCccccC
Q psy15407 265 SLRIISLHGNDISMI 279 (604)
Q Consensus 265 ~L~~L~Ls~N~l~~i 279 (604)
+|+.|+|++|+|+.+
T Consensus 2 ~L~~L~l~~n~L~~l 16 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSL 16 (17)
T ss_dssp T-SEEEETSS--SSE
T ss_pred ccCEEECCCCCCCCC
Confidence 445555555555444
No 125
>KOG3512|consensus
Probab=95.05 E-value=0.045 Score=55.70 Aligned_cols=131 Identities=23% Similarity=0.522 Sum_probs=66.2
Q ss_pred cEEEeCCCC-eEEecCCCCCCCCcccCCC-cCCCCCCCCCCCCceeecCCCeEEecCCCCcCCcCcccCCCCC--CCCCC
Q psy15407 448 ATCVDLIQA-YECRCAPGFQGEFCQTKTP-FCAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCTVNVDDCV--NHMCQ 523 (604)
Q Consensus 448 ~~C~~~~~~-~~C~C~~g~~g~~C~~~~~-~C~~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~c~~~~~~C~--~~~C~ 523 (604)
..|+....+ ++|.|..+-.|..|+..-. .... +.+. ++-......-.|.|... +..|..+ .++- +..++
T Consensus 285 s~Cv~d~~~~ltCdC~HNTaGPdCgrCKpfy~dR---PW~r-aT~~~a~~c~ac~Cn~h--arrcrfn-~Ely~lSgr~S 357 (592)
T KOG3512|consen 285 SRCVMDESSHLTCDCEHNTAGPDCGRCKPFYYDR---PWGR-ATALPANECVACNCNGH--ARRCRFN-MELYRLSGRRS 357 (592)
T ss_pred ceeeeccCCceEEecccCCCCCCcccccccccCC---Cccc-cccCCCccccccccchh--hhhcccc-hhhhcccCccc
Confidence 468998999 8999999999998864211 1111 1111 11111111112333321 1122111 0110 12232
Q ss_pred CCCEEee----CCCCeEe-eeCCCCccCCCCcCcccccCCCCCCCCCCCCCCC----C-ceeCCCCCCCeeeecCCCCcC
Q psy15407 524 NGGTCVD----GINDYTC-KCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKN----G-ICFQPQGSNDYLCKCAPGYSG 593 (604)
Q Consensus 524 ~~~~C~~----~~~~y~C-~C~~G~~G~~C~~~~~~~~~~~~~~~C~~~~C~~----g-~C~~~~g~~~~~C~C~~G~~G 593 (604)
+|+|++ +.| -.| .|.+||+.+.=. .......|...+|+. | .|..+.|+ |.|.+|.+|
T Consensus 358 -ggvClnCrHnTaG-rhChyCreGyyRd~s~-------pl~hrkaCk~CdChpVGs~gktCNq~tGq----CpCkeGvtG 424 (592)
T KOG3512|consen 358 -GGVCLNCRHNTAG-RHCHYCREGYYRDGSK-------PLTHRKACKACDCHPVGSAGKTCNQTTGQ----CPCKEGVTG 424 (592)
T ss_pred -cceEeecccCCCC-cccccccCccccCCCC-------CCchhhhhhhcCCcccccccccccccCCc----ccCCCCCcc
Confidence 345643 333 345 578887633211 111234566656643 2 28877765 999999999
Q ss_pred CCCCC
Q psy15407 594 KESLL 598 (604)
Q Consensus 594 ~~C~~ 598 (604)
..|+.
T Consensus 425 ~tCnr 429 (592)
T KOG3512|consen 425 LTCNR 429 (592)
T ss_pred ccccc
Confidence 99974
No 126
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=94.91 E-value=0.023 Score=47.10 Aligned_cols=41 Identities=22% Similarity=0.592 Sum_probs=32.1
Q ss_pred CCCCCC---CCCCCCCceeCCCCCCCeeeecCCCCcCCCCCCCc
Q psy15407 560 QTSPCQ---HHDCKNGICFQPQGSNDYLCKCAPGYSGKESLLQQ 600 (604)
Q Consensus 560 ~~~~C~---~~~C~~g~C~~~~g~~~~~C~C~~G~~G~~C~~~~ 600 (604)
...+|. ++-|-||.|.-......+.|.|..||+|.+||..+
T Consensus 41 ~i~~Cp~ey~~YClHG~C~yI~dl~~~~CrC~~GYtGeRCEh~d 84 (139)
T PHA03099 41 AIRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYTGIRCQHVV 84 (139)
T ss_pred ccccCChhhCCEeECCEEEeeccCCCceeECCCCccccccccee
Confidence 345564 35588999987666678999999999999998654
No 127
>smart00051 DSL delta serrate ligand.
Probab=94.87 E-value=0.032 Score=41.27 Aligned_cols=46 Identities=20% Similarity=0.494 Sum_probs=30.8
Q ss_pred eEEecCCCCcCCcCcccCCCCCC-CCCCCCCEEeeCCCCeEeeeCCCCccCCC
Q psy15407 497 YTCECTPGFSGVNCTVNVDDCVN-HMCQNGGTCVDGINDYTCKCEGDFVGKFC 548 (604)
Q Consensus 497 ~~C~C~~g~~g~~c~~~~~~C~~-~~C~~~~~C~~~~~~y~C~C~~G~~G~~C 548 (604)
++-.|.++|.|..|. ..|.. +.+..+..|.. .| .|+|.+||+|..|
T Consensus 17 ~rv~C~~~~yG~~C~---~~C~~~~d~~~~~~Cd~-~G--~~~C~~Gw~G~~C 63 (63)
T smart00051 17 IRVTCDENYYGEGCN---KFCRPRDDFFGHYTCDE-NG--NKGCLEGWMGPYC 63 (63)
T ss_pred EEeeCCCCCcCCccC---CEeCcCccccCCccCCc-CC--CEecCCCCcCCCC
Confidence 344688888888886 33432 23556677754 34 6888999988876
No 128
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=94.72 E-value=0.017 Score=30.47 Aligned_cols=17 Identities=47% Similarity=0.749 Sum_probs=9.3
Q ss_pred CCCcEEeCCCCcceecC
Q psy15407 140 PNLIKLDLRRNQVTGIE 156 (604)
Q Consensus 140 ~~L~~L~Ls~N~i~~i~ 156 (604)
++|+.|+|++|+|+.++
T Consensus 1 ~~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 1 PNLRTLDLSNNRLTSLP 17 (17)
T ss_dssp TT-SEEEETSS--SSE-
T ss_pred CccCEEECCCCCCCCCc
Confidence 46777788877776653
No 129
>PF01463 LRRCT: Leucine rich repeat C-terminal domain; InterPro: IPR000483 Leucine-rich repeats (LRR, see IPR001611 from INTERPRO) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions []. Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain (IPR000372 from INTERPRO) and a C-terminal LRR domain. This entry represents the C-terminal LRR domain. ; PDB: 3RFE_B 3REZ_D 2WFH_A 2V70_B 2V9S_C 2V9T_B 1W8A_A.
Probab=94.61 E-value=0.012 Score=34.67 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=18.6
Q ss_pred CCCCCcccccCcccccCCCCceeec
Q psy15407 39 SPCQHHDCKNGICFQPQGSNDYLCK 63 (604)
Q Consensus 39 ~~C~~~~~~~~~~~~~~~~~~~~c~ 63 (604)
++|++|..++| ++.++...+|.|.
T Consensus 2 ~~Ca~P~~lrg-~l~~~~~~~f~C~ 25 (25)
T PF01463_consen 2 ARCASPPELRG-PLLDLPPSDFKCS 25 (25)
T ss_dssp -BEEESGGGTT-BGGGSSGGG----
T ss_pred CccCCChHHcC-cHhhCCcccCcCC
Confidence 68999999999 9999999999984
No 130
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A ....
Probab=94.15 E-value=0.04 Score=35.55 Aligned_cols=18 Identities=28% Similarity=0.848 Sum_probs=11.4
Q ss_pred EEeeCCCCeEeeeCCCCc
Q psy15407 527 TCVDGINDYTCKCEGDFV 544 (604)
Q Consensus 527 ~C~~~~~~y~C~C~~G~~ 544 (604)
.|++.+++|+|.|++||+
T Consensus 11 ~C~~~~g~~~C~C~~Gy~ 28 (36)
T PF14670_consen 11 ICVNTPGSYRCSCPPGYK 28 (36)
T ss_dssp EEEEETTSEEEE-STTEE
T ss_pred CCccCCCceEeECCCCCE
Confidence 566666666666666665
No 131
>PF01463 LRRCT: Leucine rich repeat C-terminal domain; InterPro: IPR000483 Leucine-rich repeats (LRR, see IPR001611 from INTERPRO) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions []. Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain (IPR000372 from INTERPRO) and a C-terminal LRR domain. This entry represents the C-terminal LRR domain. ; PDB: 3RFE_B 3REZ_D 2WFH_A 2V70_B 2V9S_C 2V9T_B 1W8A_A.
Probab=93.62 E-value=0.023 Score=33.42 Aligned_cols=24 Identities=46% Similarity=0.976 Sum_probs=18.3
Q ss_pred cccCCCCcccccccccCCCCceeec
Q psy15407 323 ARCTEPASMRDKLLLTAPASSFQCK 347 (604)
Q Consensus 323 ~~C~~P~~l~g~~l~~~~~~~~~C~ 347 (604)
++|++|+.++| .+.++...+|.|+
T Consensus 2 ~~Ca~P~~lrg-~l~~~~~~~f~C~ 25 (25)
T PF01463_consen 2 ARCASPPELRG-PLLDLPPSDFKCS 25 (25)
T ss_dssp -BEEESGGGTT-BGGGSSGGG----
T ss_pred CccCCChHHcC-cHhhCCcccCcCC
Confidence 58999999999 9999999999884
No 132
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=93.28 E-value=0.069 Score=31.63 Aligned_cols=19 Identities=47% Similarity=0.730 Sum_probs=15.9
Q ss_pred CCCCcEEeCCCCcceecCC
Q psy15407 139 LPNLIKLDLRRNQVTGIED 157 (604)
Q Consensus 139 l~~L~~L~Ls~N~i~~i~~ 157 (604)
|++|+.|+|++|+|+.|+.
T Consensus 1 L~~L~~L~L~~NkI~~IEn 19 (26)
T smart00365 1 LTNLEELDLSQNKIKKIEN 19 (26)
T ss_pred CCccCEEECCCCccceecC
Confidence 5789999999999988764
No 133
>KOG0473|consensus
Probab=93.26 E-value=0.0025 Score=59.28 Aligned_cols=42 Identities=29% Similarity=0.388 Sum_probs=23.5
Q ss_pred CccCcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCC
Q psy15407 114 PLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIED 157 (604)
Q Consensus 114 ~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~ 157 (604)
+..++.|||+.|++-.+... |+.++.|..|+|+.|+|..++.
T Consensus 41 ~kr~tvld~~s~r~vn~~~n--~s~~t~~~rl~~sknq~~~~~~ 82 (326)
T KOG0473|consen 41 FKRVTVLDLSSNRLVNLGKN--FSILTRLVRLDLSKNQIKFLPK 82 (326)
T ss_pred cceeeeehhhhhHHHhhccc--hHHHHHHHHHhccHhhHhhChh
Confidence 34445666666666555443 5556666666666555555443
No 134
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A ....
Probab=92.68 E-value=0.078 Score=34.23 Aligned_cols=18 Identities=33% Similarity=1.100 Sum_probs=13.7
Q ss_pred ceeecCCCeEEecCCCCc
Q psy15407 489 RCLDHFSHYTCECTPGFS 506 (604)
Q Consensus 489 ~C~~~~~~~~C~C~~g~~ 506 (604)
.|++.+++|+|.|++||.
T Consensus 11 ~C~~~~g~~~C~C~~Gy~ 28 (36)
T PF14670_consen 11 ICVNTPGSYRCSCPPGYK 28 (36)
T ss_dssp EEEEETTSEEEE-STTEE
T ss_pred CCccCCCceEeECCCCCE
Confidence 578888888888888886
No 135
>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein. MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.
Probab=90.58 E-value=0.14 Score=32.89 Aligned_cols=28 Identities=18% Similarity=0.590 Sum_probs=16.7
Q ss_pred CCCCCCCCCCEEeeCC-CCeEeeeCCCCc
Q psy15407 517 CVNHMCQNGGTCVDGI-NDYTCKCEGDFV 544 (604)
Q Consensus 517 C~~~~C~~~~~C~~~~-~~y~C~C~~G~~ 544 (604)
|....|..++.|+... |++.|.|..||.
T Consensus 2 C~~~~cP~NA~C~~~~dG~eecrCllgyk 30 (37)
T PF12946_consen 2 CIDTKCPANAGCFRYDDGSEECRCLLGYK 30 (37)
T ss_dssp -SSS---TTEEEEEETTSEEEEEE-TTEE
T ss_pred ccCccCCCCcccEEcCCCCEEEEeeCCcc
Confidence 4445677778887655 788888888885
No 136
>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates. In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.
Probab=90.39 E-value=0.078 Score=39.19 Aligned_cols=46 Identities=26% Similarity=0.655 Sum_probs=20.9
Q ss_pred CeEeeeCCCCccCCCCcCcccccCCCCCCCCCCCCCCCCc--eeCCCCCCCeeeecCCCCcCCCC
Q psy15407 534 DYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGI--CFQPQGSNDYLCKCAPGYSGKES 596 (604)
Q Consensus 534 ~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C~~~~C~~g~--C~~~~g~~~~~C~C~~G~~G~~C 596 (604)
.++-.|.+.|.|..|..- |.+.+=..+. |.. .|. =+|.+||+|+.|
T Consensus 16 ~~rv~C~~nyyG~~C~~~------------C~~~~d~~ghy~Cd~-~G~----~~C~~Gw~G~~C 63 (63)
T PF01414_consen 16 RIRVVCDENYYGPNCSKF------------CKPRDDSFGHYTCDS-NGN----KVCLPGWTGPNC 63 (63)
T ss_dssp -------TTEETTTT-EE---------------EEETTEEEEE-S-S------EEE-TTEESTTS
T ss_pred EEEEECCCCCCCccccCC------------cCCCcCCcCCcccCC-CCC----CCCCCCCcCCCC
Confidence 456789999999999853 3222111222 663 322 579999999987
No 137
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=90.26 E-value=0.23 Score=29.38 Aligned_cols=16 Identities=44% Similarity=0.530 Sum_probs=8.5
Q ss_pred CCCCeEEecCCcceee
Q psy15407 240 SKLSQLILSYNKLQCI 255 (604)
Q Consensus 240 ~~L~~L~Ls~N~l~~i 255 (604)
.+|+.|+|++|+|+.|
T Consensus 2 ~~L~~L~L~~NkI~~I 17 (26)
T smart00365 2 TNLEELDLSQNKIKKI 17 (26)
T ss_pred CccCEEECCCCcccee
Confidence 3455555555555554
No 138
>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein. MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.
Probab=89.42 E-value=0.2 Score=32.19 Aligned_cols=26 Identities=27% Similarity=0.765 Sum_probs=12.0
Q ss_pred CCCCCCCeeeeCCCCceEeeCCCCCc
Q psy15407 403 NPCRNSGTCKLLEEGRFNCECAPGYT 428 (604)
Q Consensus 403 ~~C~~~~~C~~~~~~~~~C~C~~g~~ 428 (604)
.+|+.++.|.....|+..|.|..||.
T Consensus 5 ~~cP~NA~C~~~~dG~eecrCllgyk 30 (37)
T PF12946_consen 5 TKCPANAGCFRYDDGSEECRCLLGYK 30 (37)
T ss_dssp S---TTEEEEEETTSEEEEEE-TTEE
T ss_pred ccCCCCcccEEcCCCCEEEEeeCCcc
Confidence 44555555555444555555555554
No 139
>KOG3763|consensus
Probab=88.47 E-value=0.18 Score=53.13 Aligned_cols=61 Identities=31% Similarity=0.411 Sum_probs=38.0
Q ss_pred CCCCCCeEEecCCcceeeeccccC----CCCcccEEEccCC--ccccCCc-ccccCcccceeeeccCCCcc
Q psy15407 238 PLSKLSQLILSYNKLQCIDRDALA----GLKSLRIISLHGN--DISMIPE-GAFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~i~~~~f~----~l~~L~~L~Ls~N--~l~~i~~-~~f~~l~~L~~L~L~~Npl~ 301 (604)
+.+.+..|.|++|+|..+. +++ ..++|..|+|++| .+....+ +.++ ...|++|-|.|||+.
T Consensus 216 n~p~i~sl~lsnNrL~~Ld--~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k-~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLD--ALSSLSQIAPKLKTLDLSHNHSKISSESELDKLK-GLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchh--hhhHHHHhcchhheeecccchhhhcchhhhhhhc-CCCHHHeeecCCccc
Confidence 3566777778888877763 232 2367888888888 4443332 1122 224778888888873
No 140
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=87.81 E-value=0.51 Score=39.41 Aligned_cols=30 Identities=27% Similarity=0.876 Sum_probs=23.5
Q ss_pred CCCCCCEEee--CCCCeEeeeCCCCccCCCCcC
Q psy15407 521 MCQNGGTCVD--GINDYTCKCEGDFVGKFCEIA 551 (604)
Q Consensus 521 ~C~~~~~C~~--~~~~y~C~C~~G~~G~~C~~~ 551 (604)
-|-+| +|.- ....+.|.|..||+|.+||..
T Consensus 52 YClHG-~C~yI~dl~~~~CrC~~GYtGeRCEh~ 83 (139)
T PHA03099 52 YCLHG-DCIHARDIDGMYCRCSHGYTGIRCQHV 83 (139)
T ss_pred EeECC-EEEeeccCCCceeECCCCcccccccce
Confidence 47664 8853 446789999999999999864
No 141
>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates. In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.
Probab=87.33 E-value=0.26 Score=36.43 Aligned_cols=47 Identities=21% Similarity=0.422 Sum_probs=21.0
Q ss_pred CeEEecCCCCcCCcCcccCCCCCCC-CCCCCCEEeeCCCCeEeeeCCCCccCCC
Q psy15407 496 HYTCECTPGFSGVNCTVNVDDCVNH-MCQNGGTCVDGINDYTCKCEGDFVGKFC 548 (604)
Q Consensus 496 ~~~C~C~~g~~g~~c~~~~~~C~~~-~C~~~~~C~~~~~~y~C~C~~G~~G~~C 548 (604)
.++-.|.+.|.|..|. ..|.+. .-..+-+|.. .| .-+|.+||+|..|
T Consensus 16 ~~rv~C~~nyyG~~C~---~~C~~~~d~~ghy~Cd~-~G--~~~C~~Gw~G~~C 63 (63)
T PF01414_consen 16 RIRVVCDENYYGPNCS---KFCKPRDDSFGHYTCDS-NG--NKVCLPGWTGPNC 63 (63)
T ss_dssp -------TTEETTTT----EE---EEETTEEEEE-S-S----EEE-TTEESTTS
T ss_pred EEEEECCCCCCCcccc---CCcCCCcCCcCCcccCC-CC--CCCCCCCCcCCCC
Confidence 3567899999999997 234332 1122345653 33 3479999999876
No 142
>KOG2120|consensus
Probab=87.15 E-value=0.024 Score=54.86 Aligned_cols=153 Identities=20% Similarity=0.154 Sum_probs=81.1
Q ss_pred CcEEecCCCcceeecCCCccCCCCCCcEEeCCCCcceecCCCcCCCc--------------------------ccCCcCC
Q psy15407 117 TTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGE--------------------------NDQGCLG 170 (604)
Q Consensus 117 ~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~l--------------------------~~L~~L~ 170 (604)
++.|||++..|+.-.-.++++...+|+.|.|.++++..--....+.- ..|..|+
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LN 266 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELN 266 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcC
Confidence 47899999888654444556777788888888887765222233333 4444444
Q ss_pred CCCCCCCccc-cccEEEccCCcccccccc---ccceeeeeeccccCCccccceeecCCCCc-eeeccCCCCCCCCCCCeE
Q psy15407 171 DNYCPPKCTC-TVRVLFYDGRAGECYIAV---ELFSSRIRVSYYVGNYPVSTMYRDLSNNQ-IGFLSNFTFSPLSKLSQL 245 (604)
Q Consensus 171 l~~~~~~~~~-~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~-i~~l~~~~f~~l~~L~~L 245 (604)
|+++....-. ...+-..+.....+.+.. ++..+ .+..+...-| .|.+||||.+. |+.--...|-.++.|++|
T Consensus 267 lsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~s--h~~tL~~rcp-~l~~LDLSD~v~l~~~~~~~~~kf~~L~~l 343 (419)
T KOG2120|consen 267 LSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKS--HLSTLVRRCP-NLVHLDLSDSVMLKNDCFQEFFKFNYLQHL 343 (419)
T ss_pred chHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhh--HHHHHHHhCC-ceeeeccccccccCchHHHHHHhcchheee
Confidence 4443211100 000011111111111111 11111 2222222333 88999999875 332112345678889998
Q ss_pred EecCCcceeeeccc---cCCCCcccEEEccCC
Q psy15407 246 ILSYNKLQCIDRDA---LAGLKSLRIISLHGN 274 (604)
Q Consensus 246 ~Ls~N~l~~i~~~~---f~~l~~L~~L~Ls~N 274 (604)
.|+... .|+|.. |...++|.+|++.+-
T Consensus 344 SlsRCY--~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 344 SLSRCY--DIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred ehhhhc--CCChHHeeeeccCcceEEEEeccc
Confidence 888764 344543 566789999997653
No 143
>PHA02887 EGF-like protein; Provisional
Probab=87.00 E-value=0.55 Score=38.54 Aligned_cols=29 Identities=28% Similarity=0.839 Sum_probs=21.0
Q ss_pred CCCCCCEEe--eCCCCeEeeeCCCCccCCCCc
Q psy15407 521 MCQNGGTCV--DGINDYTCKCEGDFVGKFCEI 550 (604)
Q Consensus 521 ~C~~~~~C~--~~~~~y~C~C~~G~~G~~C~~ 550 (604)
-|-+ |+|. .....+.|.|++||+|.+|+.
T Consensus 93 YCiH-G~C~yI~dL~epsCrC~~GYtG~RCE~ 123 (126)
T PHA02887 93 FCIN-GECMNIIDLDEKFCICNKGYTGIRCDE 123 (126)
T ss_pred EeeC-CEEEccccCCCceeECCCCcccCCCCc
Confidence 4653 6884 334567899999999999875
No 144
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=86.98 E-value=0.39 Score=28.32 Aligned_cols=18 Identities=28% Similarity=0.610 Sum_probs=14.3
Q ss_pred CcccEEEccCCccccCCc
Q psy15407 264 KSLRIISLHGNDISMIPE 281 (604)
Q Consensus 264 ~~L~~L~Ls~N~l~~i~~ 281 (604)
++|+.|++++|+|+.+|+
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 467888888888888876
No 145
>KOG3516|consensus
Probab=84.14 E-value=1.1 Score=51.30 Aligned_cols=38 Identities=32% Similarity=0.957 Sum_probs=33.6
Q ss_pred CCCcCCCCCCCCeeecCCCCceeeeCC-CCCcCCCCcccC
Q psy15407 359 NACYKSPCTNQGVCEPLPERQYQCRCT-PGYHGQHCEFMI 397 (604)
Q Consensus 359 ~~C~~~~C~~~g~C~~~~~~~~~C~C~-~g~~G~~c~~~~ 397 (604)
+.|.++||.++|.|.. ....|.|.|. .||+|..|.+.+
T Consensus 546 drClPN~CehgG~C~Q-s~~~f~C~C~~TGY~GatCHtsi 584 (1306)
T KOG3516|consen 546 DRCLPNPCEHGGKCSQ-SWDDFECNCELTGYKGATCHTSI 584 (1306)
T ss_pred cccCCccccCCCcccc-cccceeEeccccccccccccCCC
Confidence 5799999999999997 5678999998 999999998654
No 146
>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation. They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.
Probab=84.11 E-value=0.84 Score=31.79 Aligned_cols=24 Identities=25% Similarity=0.617 Sum_probs=17.0
Q ss_pred EEeeCCCCeEeeeCCCCccCCCCcCc
Q psy15407 527 TCVDGINDYTCKCEGDFVGKFCEIAP 552 (604)
Q Consensus 527 ~C~~~~~~y~C~C~~G~~G~~C~~~~ 552 (604)
.|....| +|.|+++|+|..|+...
T Consensus 12 ~C~~~~G--~C~C~~~~~G~~C~~C~ 35 (49)
T PF00053_consen 12 TCDPSTG--QCVCKPGTTGPRCDQCK 35 (49)
T ss_dssp SEEETCE--EESBSTTEESTTS-EE-
T ss_pred cccCCCC--EEeccccccCCcCcCCC
Confidence 6766444 89999999999988643
No 147
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=84.01 E-value=0.64 Score=27.43 Aligned_cols=18 Identities=33% Similarity=0.665 Sum_probs=14.4
Q ss_pred CCCcEEeCCCCcceecCC
Q psy15407 140 PNLIKLDLRRNQVTGIED 157 (604)
Q Consensus 140 ~~L~~L~Ls~N~i~~i~~ 157 (604)
++|+.|++++|+|+.++.
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 468888888888888775
No 148
>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies
Probab=83.65 E-value=1.9 Score=30.17 Aligned_cols=23 Identities=26% Similarity=0.823 Sum_probs=16.8
Q ss_pred EeeCCCCeEeeeCCCCccCCCCcCc
Q psy15407 528 CVDGINDYTCKCEGDFVGKFCEIAP 552 (604)
Q Consensus 528 C~~~~~~y~C~C~~G~~G~~C~~~~ 552 (604)
|....| +|.|++||+|..|+...
T Consensus 14 C~~~~G--~C~C~~~~~G~~C~~C~ 36 (50)
T cd00055 14 CDPGTG--QCECKPNTTGRRCDRCA 36 (50)
T ss_pred ccCCCC--EEeCCCcCCCCCCCCCC
Confidence 544444 78899999999888653
No 149
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=83.11 E-value=0.62 Score=26.81 Aligned_cols=17 Identities=53% Similarity=0.630 Sum_probs=11.5
Q ss_pred CCCCcEEeCCCCcceec
Q psy15407 139 LPNLIKLDLRRNQVTGI 155 (604)
Q Consensus 139 l~~L~~L~Ls~N~i~~i 155 (604)
+++|++|+|++|+|+..
T Consensus 1 ~~~L~~L~l~~n~i~~~ 17 (24)
T PF13516_consen 1 NPNLETLDLSNNQITDE 17 (24)
T ss_dssp -TT-SEEE-TSSBEHHH
T ss_pred CCCCCEEEccCCcCCHH
Confidence 46899999999998753
No 150
>KOG3516|consensus
Probab=82.85 E-value=1 Score=51.66 Aligned_cols=41 Identities=27% Similarity=0.655 Sum_probs=35.6
Q ss_pred CCCCCCCCCCCCCc-eeCCCCCCCeeeecC-CCCcCCCCCCCccc
Q psy15407 560 QTSPCQHHDCKNGI-CFQPQGSNDYLCKCA-PGYSGKESLLQQTT 602 (604)
Q Consensus 560 ~~~~C~~~~C~~g~-C~~~~g~~~~~C~C~-~G~~G~~C~~~~~~ 602 (604)
..+.|.++.|++|+ |.... .+|.|.|. .||.|..|....+.
T Consensus 544 i~drClPN~CehgG~C~Qs~--~~f~C~C~~TGY~GatCHtsi~e 586 (1306)
T KOG3516|consen 544 ISDRCLPNPCEHGGKCSQSW--DDFECNCELTGYKGATCHTSIYE 586 (1306)
T ss_pred cccccCCccccCCCcccccc--cceeEeccccccccccccCCCcc
Confidence 47899999999988 99877 78999998 99999999876553
No 151
>KOG4308|consensus
Probab=82.73 E-value=0.0082 Score=64.03 Aligned_cols=86 Identities=24% Similarity=0.257 Sum_probs=53.7
Q ss_pred ccceeecCCCCceeecc----CCCCCCCCC-CCeEEecCCcceeee----ccccCCC-CcccEEEccCCccccCCcc---
Q psy15407 216 VSTMYRDLSNNQIGFLS----NFTFSPLSK-LSQLILSYNKLQCID----RDALAGL-KSLRIISLHGNDISMIPEG--- 282 (604)
Q Consensus 216 ~~L~~L~Ls~N~i~~l~----~~~f~~l~~-L~~L~Ls~N~l~~i~----~~~f~~l-~~L~~L~Ls~N~l~~i~~~--- 282 (604)
.++++|.|+++.++... ..++...++ +..|++..|++.... ...|..+ ..|++|+++.|.|+.-...
T Consensus 204 ~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~ 283 (478)
T KOG4308|consen 204 SSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLA 283 (478)
T ss_pred ccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHH
Confidence 36777788887776421 234445555 667888888876541 1223444 5678888888888743322
Q ss_pred -cccCcccceeeeccCCCcc
Q psy15407 283 -AFADLHAITHLAIGGNPLY 301 (604)
Q Consensus 283 -~f~~l~~L~~L~L~~Npl~ 301 (604)
.+.....++.|.|+.|++.
T Consensus 284 ~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 284 EVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHhhhHHHHHhhcccCccc
Confidence 2334457788888888875
No 152
>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.
Probab=80.98 E-value=1.7 Score=41.58 Aligned_cols=18 Identities=22% Similarity=0.848 Sum_probs=10.6
Q ss_pred EEeeCCCCeEeeeCCCCc
Q psy15407 527 TCVDGINDYTCKCEGDFV 544 (604)
Q Consensus 527 ~C~~~~~~y~C~C~~G~~ 544 (604)
.|.+..|+|.|.|++||+
T Consensus 200 ~C~~~~g~~~c~c~~g~~ 217 (224)
T cd01475 200 VCISTPGSYLCACTEGYA 217 (224)
T ss_pred eEEcCCCCEEeECCCCcc
Confidence 455555666666666654
No 153
>KOG3864|consensus
Probab=80.94 E-value=0.22 Score=45.72 Aligned_cols=80 Identities=20% Similarity=0.161 Sum_probs=54.6
Q ss_pred cceeecCCCCceeeccCCCCCCCCCCCeEEecCCc------ceeeeccccCCCCcccEEEccCCc-cccCCcccccCccc
Q psy15407 217 STMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNK------LQCIDRDALAGLKSLRIISLHGND-ISMIPEGAFADLHA 289 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~------l~~i~~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f~~l~~ 289 (604)
.++.+|-++..|..+.-..|..++.|+.|.|.+.+ |..|.. ..++|+.|+|+++. |+.---..+..+++
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~----~~~~L~~L~lsgC~rIT~~GL~~L~~lkn 177 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGG----LAPSLQDLDLSGCPRITDGGLACLLKLKN 177 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcc----cccchheeeccCCCeechhHHHHHHHhhh
Confidence 57778888888887777777788888888777664 333322 34788899998774 66544444566777
Q ss_pred ceeeeccCCCc
Q psy15407 290 ITHLAIGGNPL 300 (604)
Q Consensus 290 L~~L~L~~Npl 300 (604)
|+.|.|.+=|.
T Consensus 178 Lr~L~l~~l~~ 188 (221)
T KOG3864|consen 178 LRRLHLYDLPY 188 (221)
T ss_pred hHHHHhcCchh
Confidence 77777765443
No 154
>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.
Probab=80.87 E-value=1.8 Score=41.52 Aligned_cols=20 Identities=25% Similarity=0.762 Sum_probs=14.0
Q ss_pred cEEEeCCCCeEEecCCCCCC
Q psy15407 448 ATCVDLIQAYECRCAPGFQG 467 (604)
Q Consensus 448 ~~C~~~~~~~~C~C~~g~~g 467 (604)
..|.++.|+|.|.|.+||+.
T Consensus 199 ~~C~~~~g~~~c~c~~g~~~ 218 (224)
T cd01475 199 QVCISTPGSYLCACTEGYAL 218 (224)
T ss_pred ceEEcCCCCEEeECCCCccC
Confidence 35777777777777777753
No 155
>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function. It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO
Probab=77.74 E-value=3.9 Score=28.81 Aligned_cols=20 Identities=40% Similarity=1.173 Sum_probs=15.7
Q ss_pred CCCCCCEEeeCCCCeEeeeCCCCc
Q psy15407 521 MCQNGGTCVDGINDYTCKCEGDFV 544 (604)
Q Consensus 521 ~C~~~~~C~~~~~~y~C~C~~G~~ 544 (604)
.|..++.|++. +|.|++||+
T Consensus 27 qC~~~s~C~~g----~C~C~~g~~ 46 (52)
T PF01683_consen 27 QCIGGSVCVNG----RCQCPPGYV 46 (52)
T ss_pred CCCCcCEEcCC----EeECCCCCE
Confidence 46677889765 899999986
No 156
>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation. They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.
Probab=76.96 E-value=1.5 Score=30.51 Aligned_cols=23 Identities=26% Similarity=0.496 Sum_probs=17.3
Q ss_pred ceeCCCCCCCeeeecCCCCcCCCCCCC
Q psy15407 573 ICFQPQGSNDYLCKCAPGYSGKESLLQ 599 (604)
Q Consensus 573 ~C~~~~g~~~~~C~C~~G~~G~~C~~~ 599 (604)
.|.... .+|.|++||+|++|+.-
T Consensus 12 ~C~~~~----G~C~C~~~~~G~~C~~C 34 (49)
T PF00053_consen 12 TCDPST----GQCVCKPGTTGPRCDQC 34 (49)
T ss_dssp SEEETC----EEESBSTTEESTTS-EE
T ss_pred cccCCC----CEEeccccccCCcCcCC
Confidence 376655 46999999999999854
No 157
>KOG3763|consensus
Probab=76.56 E-value=0.98 Score=47.84 Aligned_cols=61 Identities=30% Similarity=0.266 Sum_probs=43.4
Q ss_pred cceeecCCCCceeeccC--CCCCCCCCCCeEEecCC--cceeeec-cccCCCCcccEEEccCCcccc
Q psy15407 217 STMYRDLSNNQIGFLSN--FTFSPLSKLSQLILSYN--KLQCIDR-DALAGLKSLRIISLHGNDISM 278 (604)
Q Consensus 217 ~L~~L~Ls~N~i~~l~~--~~f~~l~~L~~L~Ls~N--~l~~i~~-~~f~~l~~L~~L~Ls~N~l~~ 278 (604)
.+..|.|++|+|..|.. ..-...++|+.|+|++| .+..... +.++ ...|++|.|.+|.|.+
T Consensus 219 ~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k-~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 219 EILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLK-GLPLEELVLEGNPLCT 284 (585)
T ss_pred ceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhc-CCCHHHeeecCCcccc
Confidence 77788999999987763 12234578999999999 5544322 2222 3468999999999873
No 158
>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies
Probab=74.91 E-value=3.4 Score=28.85 Aligned_cols=23 Identities=26% Similarity=0.618 Sum_probs=17.2
Q ss_pred eeCCCCCCCeeeecCCCCcCCCCCCCc
Q psy15407 574 CFQPQGSNDYLCKCAPGYSGKESLLQQ 600 (604)
Q Consensus 574 C~~~~g~~~~~C~C~~G~~G~~C~~~~ 600 (604)
|....| +|.|++||.|..|+...
T Consensus 14 C~~~~G----~C~C~~~~~G~~C~~C~ 36 (50)
T cd00055 14 CDPGTG----QCECKPNTTGRRCDRCA 36 (50)
T ss_pred ccCCCC----EEeCCCcCCCCCCCCCC
Confidence 555444 49999999999998543
No 159
>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai.
Probab=73.77 E-value=5.2 Score=27.40 Aligned_cols=16 Identities=25% Similarity=0.926 Sum_probs=11.7
Q ss_pred EeeeCCCCccCCCCcC
Q psy15407 536 TCKCEGDFVGKFCEIA 551 (604)
Q Consensus 536 ~C~C~~G~~G~~C~~~ 551 (604)
+|.|++||+|..|+..
T Consensus 19 ~C~C~~~~~G~~C~~C 34 (46)
T smart00180 19 QCECKPNVTGRRCDRC 34 (46)
T ss_pred EEECCCCCCCCCCCcC
Confidence 6778888877777643
No 160
>KOG3514|consensus
Probab=73.52 E-value=2.3 Score=48.22 Aligned_cols=36 Identities=42% Similarity=1.021 Sum_probs=32.8
Q ss_pred CCCCCCCCCCCEEeeCCCCeEeeeC-CCCccCCCCcC
Q psy15407 516 DCVNHMCQNGGTCVDGINDYTCKCE-GDFVGKFCEIA 551 (604)
Q Consensus 516 ~C~~~~C~~~~~C~~~~~~y~C~C~-~G~~G~~C~~~ 551 (604)
.|..+||.++|+|..+-+.|.|.|. .||.|+.||..
T Consensus 625 ~C~~nPC~N~g~C~egwNrfiCDCs~T~~~G~~CerE 661 (1591)
T KOG3514|consen 625 ICESNPCQNGGKCSEGWNRFICDCSGTGFEGRTCERE 661 (1591)
T ss_pred ccCCCcccCCCCccccccccccccccCcccCccccce
Confidence 6889999999999999999999997 59999999874
No 161
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=73.14 E-value=2.5 Score=25.44 Aligned_cols=15 Identities=40% Similarity=0.671 Sum_probs=12.5
Q ss_pred CCCcEEeCCCCccee
Q psy15407 140 PNLIKLDLRRNQVTG 154 (604)
Q Consensus 140 ~~L~~L~Ls~N~i~~ 154 (604)
++|++|+|++|.|..
T Consensus 2 ~~L~~LdL~~N~i~~ 16 (28)
T smart00368 2 PSLRELDLSNNKLGD 16 (28)
T ss_pred CccCEEECCCCCCCH
Confidence 578999999998864
No 162
>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai.
Probab=71.27 E-value=4.9 Score=27.52 Aligned_cols=16 Identities=25% Similarity=0.663 Sum_probs=13.5
Q ss_pred eeecCCCCcCCCCCCC
Q psy15407 584 LCKCAPGYSGKESLLQ 599 (604)
Q Consensus 584 ~C~C~~G~~G~~C~~~ 599 (604)
+|.|++||+|++|+..
T Consensus 19 ~C~C~~~~~G~~C~~C 34 (46)
T smart00180 19 QCECKPNVTGRRCDRC 34 (46)
T ss_pred EEECCCCCCCCCCCcC
Confidence 5999999999999854
No 163
>KOG3864|consensus
Probab=68.33 E-value=0.49 Score=43.58 Aligned_cols=31 Identities=29% Similarity=0.089 Sum_probs=14.9
Q ss_pred cceeecCCCCc-eeeccCCCCCCCCCCCeEEe
Q psy15407 217 STMYRDLSNNQ-IGFLSNFTFSPLSKLSQLIL 247 (604)
Q Consensus 217 ~L~~L~Ls~N~-i~~l~~~~f~~l~~L~~L~L 247 (604)
+|+.|+|+++. ||+-.-..+..+++|+.|.|
T Consensus 152 ~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~l 183 (221)
T KOG3864|consen 152 SLQDLDLSGCPRITDGGLACLLKLKNLRRLHL 183 (221)
T ss_pred chheeeccCCCeechhHHHHHHHhhhhHHHHh
Confidence 66666666553 44333333334444444444
No 164
>PF04863 EGF_alliinase: Alliinase EGF-like domain; InterPro: IPR006947 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A.
Probab=62.01 E-value=4.3 Score=28.56 Aligned_cols=34 Identities=24% Similarity=0.564 Sum_probs=15.0
Q ss_pred CCCCCCCeeecC---CCCceeeeCCCCCcCCCCcccC
Q psy15407 364 SPCTNQGVCEPL---PERQYQCRCTPGYHGQHCEFMI 397 (604)
Q Consensus 364 ~~C~~~g~C~~~---~~~~~~C~C~~g~~G~~c~~~~ 397 (604)
.+|+.||..... ..|...|.|..-|.|..|+..+
T Consensus 17 i~CSGHGr~flDg~~~dG~p~CECn~Cy~GpdCS~~~ 53 (56)
T PF04863_consen 17 ISCSGHGRAFLDGLIADGSPVCECNSCYGGPDCSTLI 53 (56)
T ss_dssp S--TTSEE--TTS-EETTEE--EE-TTEESTTS-EE-
T ss_pred CCcCCCCeeeeccccccCCccccccCCcCCCCcccCC
Confidence 356666665521 1245677777777777776544
No 165
>KOG3509|consensus
Probab=61.60 E-value=13 Score=42.94 Aligned_cols=73 Identities=25% Similarity=0.506 Sum_probs=46.4
Q ss_pred CCCCCCCCCCCCCEEeeCCCCeEeeeCCCCccCCCCcCcccccCCCCCCCCCCCCCCCCceeCCCCCCCeeeecCCCCcC
Q psy15407 514 VDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSG 593 (604)
Q Consensus 514 ~~~C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~~~~~~~~C~~~~C~~g~C~~~~g~~~~~C~C~~G~~G 593 (604)
.+.|...+|.+.+.|........|.|++||+|..|++++. ...+..+.+.-++|.... +...+.|.+| .|
T Consensus 406 g~~c~~~p~~~~g~c~p~~~~~~c~c~~g~~G~~c~d~~~-------~~~~~~~g~y~~t~~~~~--~~~~~~c~pg-~g 475 (964)
T KOG3509|consen 406 GDVCWRIPCQHDGPCLQTLEGKQCLCPPGYTGDSCEDCMN-------GCDRSPNGSYLGTCVPIQ--GKRCEYCGPG-AG 475 (964)
T ss_pred CCccccccCCCCccccccccccceeccccccCchhhccCc-------cccccCCccccceEeccC--CCcceeecCC-CC
Confidence 3567777888888888877778888888888888887532 122233334445555444 3345667777 55
Q ss_pred CCC
Q psy15407 594 KES 596 (604)
Q Consensus 594 ~~C 596 (604)
..+
T Consensus 476 ~~~ 478 (964)
T KOG3509|consen 476 APT 478 (964)
T ss_pred Ccc
Confidence 444
No 166
>KOG3514|consensus
Probab=59.66 E-value=5.6 Score=45.30 Aligned_cols=35 Identities=31% Similarity=0.878 Sum_probs=25.1
Q ss_pred cCCCCCCCCCcEEEeCCCCeEEecC-CCCCCCCccc
Q psy15407 438 DCLSHKCENNATCVDLIQAYECRCA-PGFQGEFCQT 472 (604)
Q Consensus 438 ~C~~~~C~~~~~C~~~~~~~~C~C~-~g~~g~~C~~ 472 (604)
.|.++||.|+|+|....+.|.|.|. .||.|+.|+.
T Consensus 625 ~C~~nPC~N~g~C~egwNrfiCDCs~T~~~G~~Cer 660 (1591)
T KOG3514|consen 625 ICESNPCQNGGKCSEGWNRFICDCSGTGFEGRTCER 660 (1591)
T ss_pred ccCCCcccCCCCccccccccccccccCcccCccccc
Confidence 5667777777777777777777775 5677777753
No 167
>KOG1388|consensus
Probab=55.02 E-value=10 Score=35.25 Aligned_cols=58 Identities=29% Similarity=0.671 Sum_probs=39.4
Q ss_pred EeeCCCCeEee-eCCCCccCCCCcCcccccCCCCCCCCCCCCCCCCc--eeCCCCCCCeeeec-CCCCcCCCCCCCcc
Q psy15407 528 CVDGINDYTCK-CEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGI--CFQPQGSNDYLCKC-APGYSGKESLLQQT 601 (604)
Q Consensus 528 C~~~~~~y~C~-C~~G~~G~~C~~~~~~~~~~~~~~~C~~~~C~~g~--C~~~~g~~~~~C~C-~~G~~G~~C~~~~~ 601 (604)
|.+.+-++.|. |..||+|++ +...|+...|..++ |+...+ +|.| .-|+.|+.|+.-+.
T Consensus 69 ~~N~~~g~~c~kc~~g~~Gdt------------N~g~c~~~~~~g~~~~~~~~~~----~c~c~~kgvvgd~c~~~e~ 130 (217)
T KOG1388|consen 69 CENGTTGAHCEKCIVGFYGDT------------NGGKCQPCDCNGGASACVTLTG----KCFCTTKGVVGDLCPKCEV 130 (217)
T ss_pred ccCccccccCCceEEEEEecC------------CCCccCHhhhcCCeeeeeccCC----ccccccceEecccCccccc
Confidence 44556667785 888888852 14556666666655 776664 4889 77899998876553
No 168
>PF04863 EGF_alliinase: Alliinase EGF-like domain; InterPro: IPR006947 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A.
Probab=54.78 E-value=5.6 Score=28.03 Aligned_cols=34 Identities=32% Similarity=0.657 Sum_probs=16.2
Q ss_pred CCCCCCeeeeC---CCCceEeeCCCCCcCCCCCcCCC
Q psy15407 404 PCRNSGTCKLL---EEGRFNCECAPGYTGDRCEINID 437 (604)
Q Consensus 404 ~C~~~~~C~~~---~~~~~~C~C~~g~~g~~C~~~~~ 437 (604)
+|..+|..... ..|...|.|..-|.|..|..-+.
T Consensus 18 ~CSGHGr~flDg~~~dG~p~CECn~Cy~GpdCS~~~~ 54 (56)
T PF04863_consen 18 SCSGHGRAFLDGLIADGSPVCECNSCYGGPDCSTLIP 54 (56)
T ss_dssp --TTSEE--TTS-EETTEE--EE-TTEESTTS-EE-T
T ss_pred CcCCCCeeeeccccccCCccccccCCcCCCCcccCCC
Confidence 46666665421 24557788888888888875443
No 169
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=51.93 E-value=15 Score=30.61 Aligned_cols=24 Identities=33% Similarity=0.836 Sum_probs=13.7
Q ss_pred CCCCCCcEEEeCCCCeEEecCCCCC
Q psy15407 442 HKCENNATCVDLIQAYECRCAPGFQ 466 (604)
Q Consensus 442 ~~C~~~~~C~~~~~~~~C~C~~g~~ 466 (604)
..|+..|.|.. .....|.|.+||.
T Consensus 84 ~~CG~~g~C~~-~~~~~C~Cl~GF~ 107 (110)
T PF00954_consen 84 GFCGPNGICNS-NNSPKCSCLPGFE 107 (110)
T ss_pred cccCCccEeCC-CCCCceECCCCcC
Confidence 45666666633 2344566666664
No 170
>KOG0196|consensus
Probab=49.98 E-value=23 Score=39.73 Aligned_cols=12 Identities=33% Similarity=0.855 Sum_probs=10.2
Q ss_pred CCeeeecCCCCc
Q psy15407 581 NDYLCKCAPGYS 592 (604)
Q Consensus 581 ~~~~C~C~~G~~ 592 (604)
++..|.|..||.
T Consensus 306 ga~~C~C~~gyy 317 (996)
T KOG0196|consen 306 GATSCTCENGYY 317 (996)
T ss_pred CCCcccccCCcc
Confidence 567899999995
No 171
>PF12955 DUF3844: Domain of unknown function (DUF3844); InterPro: IPR024382 This presumed domain is found in fungal species. It contains 8 largely conserved cysteine residues. This domain is found in proteins thought to be located in the endoplasmic reticulum.
Probab=48.34 E-value=8.8 Score=31.34 Aligned_cols=30 Identities=23% Similarity=0.850 Sum_probs=16.9
Q ss_pred cCCCCCCCCCCCCceeecC-----CCeEEecCCCC
Q psy15407 476 FCAGEYNPCRNGARCLDHF-----SHYTCECTPGF 505 (604)
Q Consensus 476 ~C~~~~~~C~~~~~C~~~~-----~~~~C~C~~g~ 505 (604)
.|....+.|..+|.|+... .=|.|.|.+.+
T Consensus 7 aC~~~Tn~CsgHG~C~~~~~~~~~~C~~C~C~~T~ 41 (103)
T PF12955_consen 7 ACENATNNCSGHGSCVKKYGSGGGDCFACKCKPTV 41 (103)
T ss_pred HHHHhccCCCCCceEeeccCCCccceEEEEeeccc
Confidence 3444455677777776552 22566666643
No 172
>KOG3509|consensus
Probab=48.04 E-value=43 Score=38.79 Aligned_cols=17 Identities=24% Similarity=0.507 Sum_probs=10.9
Q ss_pred eeecCCCCcCCCCCCCc
Q psy15407 584 LCKCAPGYSGKESLLQQ 600 (604)
Q Consensus 584 ~C~C~~G~~G~~C~~~~ 600 (604)
.|+|+.||.|..||...
T Consensus 719 ~C~c~~g~~G~~ce~c~ 735 (964)
T KOG3509|consen 719 QCQCPKGLVGTSCEDCA 735 (964)
T ss_pred ccccCccccCccccccc
Confidence 56677777776666443
No 173
>PF12955 DUF3844: Domain of unknown function (DUF3844); InterPro: IPR024382 This presumed domain is found in fungal species. It contains 8 largely conserved cysteine residues. This domain is found in proteins thought to be located in the endoplasmic reticulum.
Probab=47.00 E-value=19 Score=29.50 Aligned_cols=23 Identities=30% Similarity=0.842 Sum_probs=18.0
Q ss_pred CCCCCCCEEeeC-----CCCeEeeeCCC
Q psy15407 520 HMCQNGGTCVDG-----INDYTCKCEGD 542 (604)
Q Consensus 520 ~~C~~~~~C~~~-----~~~y~C~C~~G 542 (604)
+.|..+|.|+.. ..=|.|.|.+.
T Consensus 13 n~CsgHG~C~~~~~~~~~~C~~C~C~~T 40 (103)
T PF12955_consen 13 NNCSGHGSCVKKYGSGGGDCFACKCKPT 40 (103)
T ss_pred cCCCCCceEeeccCCCccceEEEEeecc
Confidence 468999999876 24588999883
No 174
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=40.23 E-value=31 Score=28.65 Aligned_cols=29 Identities=31% Similarity=0.740 Sum_probs=16.1
Q ss_pred CCCC-CCCCCCCCEEeeCCCCeEeeeCCCCc
Q psy15407 515 DDCV-NHMCQNGGTCVDGINDYTCKCEGDFV 544 (604)
Q Consensus 515 ~~C~-~~~C~~~~~C~~~~~~y~C~C~~G~~ 544 (604)
+.|. ...|...|.|... ....|.|.+||.
T Consensus 78 d~Cd~y~~CG~~g~C~~~-~~~~C~Cl~GF~ 107 (110)
T PF00954_consen 78 DQCDVYGFCGPNGICNSN-NSPKCSCLPGFE 107 (110)
T ss_pred cCCCCccccCCccEeCCC-CCCceECCCCcC
Confidence 4454 2456666667432 334577777765
No 175
>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet. Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane
Probab=32.87 E-value=33 Score=21.68 Aligned_cols=18 Identities=17% Similarity=0.444 Sum_probs=11.9
Q ss_pred EEeeCCCCeEeeeCCCCcc
Q psy15407 527 TCVDGINDYTCKCEGDFVG 545 (604)
Q Consensus 527 ~C~~~~~~y~C~C~~G~~G 545 (604)
.|..... +.|.|++||.-
T Consensus 11 ~CDpn~~-~~C~CPeGyIl 28 (34)
T PF09064_consen 11 DCDPNSP-GQCFCPEGYIL 28 (34)
T ss_pred ccCCCCC-CceeCCCceEe
Confidence 5654322 37999999973
No 176
>KOG3607|consensus
Probab=26.88 E-value=59 Score=36.82 Aligned_cols=25 Identities=24% Similarity=0.708 Sum_probs=20.2
Q ss_pred CCceeCCCCCCCeeeecCCCCcCCCCCCCc
Q psy15407 571 NGICFQPQGSNDYLCKCAPGYSGKESLLQQ 600 (604)
Q Consensus 571 ~g~C~~~~g~~~~~C~C~~G~~G~~C~~~~ 600 (604)
+|+|.+.. .|.|.+||.++.|+++-
T Consensus 635 ~GVCnn~~-----~ChC~~gwapp~C~~~~ 659 (716)
T KOG3607|consen 635 HGVCNNEL-----NCHCEPGWAPPFCFIFG 659 (716)
T ss_pred CcccCCCc-----ceeeCCCCCCCcccccc
Confidence 46687555 69999999999998764
No 177
>KOG1388|consensus
Probab=21.71 E-value=44 Score=31.16 Aligned_cols=57 Identities=32% Similarity=0.715 Sum_probs=32.5
Q ss_pred eeecCCCeEEe-cCCCCcCCcCcccCCCCCCCCCCCCC-EEeeCCCCeEeee-CCCCccCCCCcC
Q psy15407 490 CLDHFSHYTCE-CTPGFSGVNCTVNVDDCVNHMCQNGG-TCVDGINDYTCKC-EGDFVGKFCEIA 551 (604)
Q Consensus 490 C~~~~~~~~C~-C~~g~~g~~c~~~~~~C~~~~C~~~~-~C~~~~~~y~C~C-~~G~~G~~C~~~ 551 (604)
|.+..-++.|. |..||+|.+ .--.|....|..++ .|+..++ +|.| ..|++|..|+..
T Consensus 69 ~~N~~~g~~c~kc~~g~~Gdt---N~g~c~~~~~~g~~~~~~~~~~--~c~c~~kgvvgd~c~~~ 128 (217)
T KOG1388|consen 69 CENGTTGAHCEKCIVGFYGDT---NGGKCQPCDCNGGASACVTLTG--KCFCTTKGVVGDLCPKC 128 (217)
T ss_pred ccCccccccCCceEEEEEecC---CCCccCHhhhcCCeeeeeccCC--ccccccceEecccCccc
Confidence 44455566776 888888842 11233333343332 3444445 7888 568888887753
No 178
>PF05725 FNIP: FNIP Repeat; InterPro: IPR008615 This repeat is approximately 22 residues long and is only found in Dictyostelium discoideum (Slime mould). It appears to be related to IPR001611 from INTERPRO. The alignment consists of two tandem repeats. It is termed the FNIP repeat after the pattern of conserved residues.
Probab=20.01 E-value=1.4e+02 Score=19.96 Aligned_cols=35 Identities=20% Similarity=0.195 Sum_probs=19.3
Q ss_pred CCCCccCcEEecCCCcceeecCCCccCCCCCCcEEeCC
Q psy15407 111 KDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLR 148 (604)
Q Consensus 111 ~~l~~~~~~L~L~~N~i~~i~~~~~f~~l~~L~~L~Ls 148 (604)
..||..++.|.|..+-=..|... .+ -++|++|.+.
T Consensus 8 ~~iP~~l~~L~~g~~fn~~i~~~-~l--P~sl~~L~fg 42 (44)
T PF05725_consen 8 GSIPSSLKSLIFGSSFNQPIEPG-SL--PNSLKSLSFG 42 (44)
T ss_pred CeeCCCCeEEEECCccCccCCCC-cc--CCCceEEEee
Confidence 34677888888854444444332 12 2456666654
Done!