RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15407
(604 letters)
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 94.1 bits (232), Expect = 6e-22
Identities = 64/285 (22%), Positives = 101/285 (35%), Gaps = 31/285 (10%)
Query: 88 CPSGCSCDG---TRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIK 144
CP C C C Q+GL+ +P IP + + L+ N I + F NL
Sbjct: 2 CPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHV-PAASFRACRNLTI 60
Query: 145 LDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYIAVELFSSR 204
L L N + I+ AF G L + + GR ++
Sbjct: 61 LWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLD---RCGL 117
Query: 205 IRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLK 264
+ + + Y L +N + L + TF L L+ L L N++ + A GL
Sbjct: 118 QELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 177
Query: 265 SLRIISLHGNDISMIPEGAFADLH------------------------AITHLAIGGNPL 300
SL + LH N ++ + AF DL A+ +L + NP
Sbjct: 178 SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPW 237
Query: 301 YCDCGLAWLSEWVKRDYVEPGIARCTEPASMRDKLLLTAPASSFQ 345
CDC L W+++ C+ P + + L A+ Q
Sbjct: 238 VCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQ 282
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Length = 305
Score = 93.9 bits (232), Expect = 1e-21
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 19/227 (8%)
Query: 87 ACPSGCSCDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLD 146
CP C C V CS GL+++PKD+P T L L +N+I +I DG F L NL L
Sbjct: 3 VCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEI-KDGDFKNLKNLHTLI 61
Query: 147 LRRNQVTGIEDNAFEGENDQGCLGDNYC-----PPKCTCTVRVLFYDGRAGECYIAVELF 201
L N+++ I AF L + P K T++ L E
Sbjct: 62 LINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVH----------ENE 111
Query: 202 SSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALA 261
+++R S + G + + + + + N F + KLS + ++ + I +
Sbjct: 112 ITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL-- 169
Query: 262 GLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDCGLAW 308
SL + L GN I+ + + L+ + L + N + +
Sbjct: 170 -PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSL 215
Score = 60.4 bits (145), Expect = 1e-10
Identities = 37/232 (15%), Positives = 61/232 (26%), Gaps = 15/232 (6%)
Query: 174 CPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSN 233
CP +C C +RV+ + + P T DL NN+I + +
Sbjct: 4 CPFRCQCHLRVVQCSDL---------------GLEKVPKDLPPDTALLDLQNNKITEIKD 48
Query: 234 FTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHL 293
F L L LIL NK+ I A A L L + L N + +PE L +
Sbjct: 49 GDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVH 108
Query: 294 AIGGNPLYCDCGLAWLSEWVKRDYVEPGIARCTEPASMRDKLLLTAPASSFQCKEKVSDE 353
+ V P + E + + L+ + +
Sbjct: 109 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG 168
Query: 354 ILSKCNACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEFMIDACYGNPC 405
+ + V + + P
Sbjct: 169 LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPH 220
Score = 41.9 bits (97), Expect = 1e-04
Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 29/174 (16%)
Query: 122 LNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCT 181
+ D I I G P+L +L L N++T ++ + +G N+ LG ++
Sbjct: 157 IADTNITTIPQ----GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDN 212
Query: 182 VRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSK 241
+ + L ++++ L NN I + + F P
Sbjct: 213 GSLANT-----PHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGY 267
Query: 242 LSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISM--IPEGAFADLHAITHL 293
++ S +SL N + I F ++ +
Sbjct: 268 NTKK------------------ASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAV 303
Score = 26.9 bits (58), Expect = 7.0
Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Query: 118 TELILNDNEIGKIKSD-----GLFGRLPNLIKLDLRRNQVT--GIEDNAFEG 162
+ L++N I I S+ G + + + L N V I+ + F
Sbjct: 245 QVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 296
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of
glycoprotein Ib alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 266
Score = 91.3 bits (225), Expect = 4e-21
Identities = 49/228 (21%), Positives = 82/228 (35%), Gaps = 9/228 (3%)
Query: 88 CPSGCSCDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDL 147
C V+C +R L +P D+P TT L L++N + S L +L+L
Sbjct: 4 CEVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTF-SLATLMPYTRLTQLNL 62
Query: 148 RRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRV 207
R ++T ++ + L N + L
Sbjct: 63 DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLP------ 116
Query: 208 SYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLR 267
L N++ L +P KL +L L+ N L + L GL++L
Sbjct: 117 -LGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD 175
Query: 268 IISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDCGLAWLSEWVKR 315
+ L N + IP+G F H + + GNP C+C + + W++
Sbjct: 176 TLLLQENSLYTIPKGFF-GSHLLPFAFLHGNPWLCNCEILYFRRWLQD 222
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes
[TaxId: 1639]}
Length = 384
Score = 67.7 bits (164), Expect = 1e-12
Identities = 48/290 (16%), Positives = 89/290 (30%), Gaps = 25/290 (8%)
Query: 12 YTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGV 71
+ + + + + Q + + P +
Sbjct: 116 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 175
Query: 72 EEFRTRYAGDCLIDAACPSGCSCDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIK 131
R + + + D + + + + + + + P I EL LN N++ I
Sbjct: 176 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 235
Query: 132 SDGLFGRLPNLIKLDLRRNQVTGIEDNAFEG---ENDQGCLGDNYCPPKCTCTVRVLFYD 188
+ L NL LDL NQ++ + + E G + P T
Sbjct: 236 T---LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLEL 292
Query: 189 GRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILS 248
+ + Y L N I +S S L+KL +L +
Sbjct: 293 NENQLED-------------ISPISNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFA 337
Query: 249 YNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGN 298
NK+ + +LA L ++ +S N IS + A+L IT L +
Sbjct: 338 NNKVSDVS--SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
Score = 41.5 bits (96), Expect = 2e-04
Identities = 18/176 (10%), Positives = 51/176 (28%), Gaps = 4/176 (2%)
Query: 235 TFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLA 294
+ + L +++ L ++ ID + L +L I+ N ++ I +L + +
Sbjct: 39 SQTDLDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDIL 94
Query: 295 IGGNPLYCDCGLAWLSEWVKRDYVEPGIARCTEPASMRDKLLLTAPASSFQCKEKVSDEI 354
+ N + LA L+ I ++ + L +++ +S
Sbjct: 95 MNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLT 154
Query: 355 LSKCNACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEFMIDACYGNPCRNSGT 410
+ + + + + + + N +
Sbjct: 155 SLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQIS 210
Score = 36.5 bits (83), Expect = 0.007
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 118 TELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIE 156
T L + I I L NL +++ NQ+T I
Sbjct: 47 TTLQADRLGIKSIDG---VEYLNNLTQINFSNNQLTDIT 82
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 58.8 bits (140), Expect = 2e-10
Identities = 35/231 (15%), Positives = 62/231 (26%), Gaps = 26/231 (11%)
Query: 88 CPSG-CSCDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLD 146
C C C C + + EIP D+P EL ++ I G F +L K++
Sbjct: 1 CHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVI-QKGAFSGFGDLEKIE 59
Query: 147 L-RRNQVTGIEDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYIAVELFSSRI 205
+ + + + IE + F + I+
Sbjct: 60 ISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLP 119
Query: 206 RVSYYVGNYPVSTMYR-----------------------DLSNNQIGFLSNFTFSPLSKL 242
V V + L+ N I + N F+
Sbjct: 120 DVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLD 179
Query: 243 SQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHL 293
+ N L+ + D G I+ + I +P +L +
Sbjct: 180 ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRAR 230
Score = 36.8 bits (83), Expect = 0.005
Identities = 14/56 (25%), Positives = 20/56 (35%)
Query: 219 MYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGN 274
NN + L N F S L +S ++ + L LK LR S +
Sbjct: 180 ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
Score = 27.2 bits (58), Expect = 5.1
Identities = 12/160 (7%), Positives = 33/160 (20%)
Query: 264 KSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDCGLAWLSEWVKRDYVEPGIA 323
++ + + +I +GAF+ + + I N + S K + A
Sbjct: 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88
Query: 324 RCTEPASMRDKLLLTAPASSFQCKEKVSDEILSKCNACYKSPCTNQGVCEPLPERQYQCR 383
+ L + + + + +
Sbjct: 89 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSF 148
Query: 384 CTPGYHGQHCEFMIDACYGNPCRNSGTCKLLEEGRFNCEC 423
+ + +L E +
Sbjct: 149 VGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNN 188
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 51.6 bits (124), Expect = 1e-09
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 512 VNVDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCEI 550
V+ D C ++ C NGG+C D IN Y C C F GK CE+
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 50.0 bits (120), Expect = 4e-09
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 434 INIDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQ 471
++ D C S+ C N +C D I +YEC C GF+G+ C+
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 44.3 bits (105), Expect = 5e-07
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 397 IDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEI 434
D C NPC N G+CK + C C G+ G CE+
Sbjct: 3 GDQCESNPCLNGGSCKDDI-NSYECWCPFGFEGKNCEL 39
Score = 43.9 bits (104), Expect = 7e-07
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 482 NPCRNGARCLDHFSHYTCECTPGFSGVNC 510
NPC NG C D + Y C C GF G NC
Sbjct: 9 NPCLNGGSCKDDINSYECWCPFGFEGKNC 37
Score = 38.5 bits (90), Expect = 4e-05
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 1 NGGTCVDGINDYTCKCEGDFVGKFCEI 27
NGG+C D IN Y C C F GK CE+
Sbjct: 13 NGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 37.3 bits (87), Expect = 1e-04
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 359 NACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCE 394
+ C +PC N G C+ Y+C C G+ G++CE
Sbjct: 4 DQCESNPCLNGGSCKDDINS-YECWCPFGFEGKNCE 38
Score = 26.9 bits (60), Expect = 0.77
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Query: 40 PCQHHDCKN-GICFQPQGSNDYLCKCAPGYSGV 71
C+ + C N G C N Y C C G+ G
Sbjct: 5 QCESNPCLNGGSCKD--DINSYECWCPFGFEGK 35
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 50.8 bits (122), Expect = 3e-09
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 436 IDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQTKT 474
+++C+S+ C+N+ATC+D I ++C C PG++G C+ T
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNT 39
Score = 49.3 bits (118), Expect = 9e-09
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 514 VDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCEI 550
V++CV++ CQN TC+D I ++ C C + G CE+
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV 37
Score = 46.6 bits (111), Expect = 7e-08
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 397 IDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEIN 435
++ C NPC+N TC G F C C PGY G CE+N
Sbjct: 1 VNECVSNPCQNDATCLDQI-GEFQCICMPGYEGVHCEVN 38
Score = 44.7 bits (106), Expect = 3e-07
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 482 NPCRNGARCLDHFSHYTCECTPGFSGVNCTVN 513
NPC+N A CLD + C C PG+ GV+C VN
Sbjct: 7 NPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 38
Score = 38.5 bits (90), Expect = 5e-05
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 1 NGGTCVDGINDYTCKCEGDFVGKFCEI 27
N TC+D I ++ C C + G CE+
Sbjct: 11 NDATCLDQIGEFQCICMPGYEGVHCEV 37
Score = 37.7 bits (88), Expect = 9e-05
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 359 NACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCE 394
N C +PC N C +QC C PGY G HCE
Sbjct: 2 NECVSNPCQNDATCLDQIGE-FQCICMPGYEGVHCE 36
Score = 26.2 bits (58), Expect = 1.4
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 37 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGV 71
++PCQ+ + C ++ C C PGY GV
Sbjct: 5 VSNPCQN----DATCLD--QIGEFQCICMPGYEGV 33
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 192
Score = 52.9 bits (125), Expect = 1e-08
Identities = 41/55 (74%), Positives = 50/55 (90%)
Query: 88 CPSGCSCDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNL 142
CP+ C C+GT VDC+ RGLKEIP+DIPL+TTEL+LNDNE+G+I SDGLFGRLP+L
Sbjct: 2 CPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHL 56
Score = 50.6 bits (119), Expect = 8e-08
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 249 YNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDCGLAW 308
NK++ I GL L+ ++L+ N IS + G+F L+++T L + NP C+C LAW
Sbjct: 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 146
Query: 309 LSEWVKRDYVEPGIARCTEPASMRDKLLLTAPASSFQCKE 348
+EW+++ + G ARC P+ +RD + P S F+C
Sbjct: 147 FAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSS 186
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 48.5 bits (116), Expect = 1e-08
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 515 DDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCEI 550
D C CQN G C DG+ +YTC C F GK CE+
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL 36
Score = 48.1 bits (115), Expect = 2e-08
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 437 DDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQTKT 474
D C + C+N C D + Y C C GF+G+ C+ T
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT 38
Score = 47.0 bits (112), Expect = 5e-08
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 482 NPCRNGARCLDHFSHYTCECTPGFSGVNCTVNV 514
+PC+N +C D YTC C GF G NC +
Sbjct: 6 SPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT 38
Score = 45.5 bits (108), Expect = 2e-07
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 398 DACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEIN 435
D C +PC+N G CK G + C C G+ G CE+
Sbjct: 1 DQCETSPCQNQGKCKDGL-GEYTCTCLEGFEGKNCELF 37
Score = 38.9 bits (91), Expect = 4e-05
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 1 NGGTCVDGINDYTCKCEGDFVGKFCEI 27
N G C DG+ +YTC C F GK CE+
Sbjct: 10 NQGKCKDGLGEYTCTCLEGFEGKNCEL 36
Score = 37.4 bits (87), Expect = 1e-04
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 359 NACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCE 394
+ C SPC NQG C+ Y C C G+ G++CE
Sbjct: 1 DQCETSPCQNQGKCKDGLGE-YTCTCLEGFEGKNCE 35
Score = 27.0 bits (60), Expect = 0.74
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Query: 560 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGK 594
+TSPCQ+ G C G +Y C C G+ GK
Sbjct: 4 ETSPCQN----QGKCKD--GLGEYTCTCLEGFEGK 32
Score = 26.6 bits (59), Expect = 0.90
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 37 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGV 71
+TSPCQ+ G C G +Y C C G+ G
Sbjct: 4 ETSPCQN----QGKCKD--GLGEYTCTCLEGFEGK 32
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 47.0 bits (112), Expect = 5e-08
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 436 IDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQ 471
D C S C+N +C D +Q+Y C C P F+G C+
Sbjct: 2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37
Score = 46.6 bits (111), Expect = 6e-08
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 514 VDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCE 549
D C + CQNGG+C D + Y C C F G+ CE
Sbjct: 2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37
Score = 42.4 bits (100), Expect = 2e-06
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 482 NPCRNGARCLDHFSHYTCECTPGFSGVNC 510
+PC+NG C D Y C C P F G NC
Sbjct: 8 SPCQNGGSCKDQLQSYICFCLPAFEGRNC 36
Score = 42.4 bits (100), Expect = 2e-06
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 397 IDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCE 433
D C +PC+N G+CK + C C P + G CE
Sbjct: 2 GDQCASSPCQNGGSCKDQL-QSYICFCLPAFEGRNCE 37
Score = 37.0 bits (86), Expect = 2e-04
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 359 NACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCE 394
+ C SPC N G C+ + Y C C P + G++CE
Sbjct: 3 DQCASSPCQNGGSCKDQLQS-YICFCLPAFEGRNCE 37
Score = 36.6 bits (85), Expect = 2e-04
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 1 NGGTCVDGINDYTCKCEGDFVGKFCE 26
NGG+C D + Y C C F G+ CE
Sbjct: 12 NGGSCKDQLQSYICFCLPAFEGRNCE 37
Score = 26.2 bits (58), Expect = 1.0
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
Query: 560 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGK 594
+SPCQ+ G C Y+C C P + G+
Sbjct: 6 ASSPCQN----GGSCKD--QLQSYICFCLPAFEGR 34
Score = 25.8 bits (57), Expect = 1.4
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 6/35 (17%)
Query: 37 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGV 71
+SPCQ+ G C Y+C C P + G
Sbjct: 6 ASSPCQN----GGSCKD--QLQSYICFCLPAFEGR 34
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 45.8 bits (109), Expect = 1e-07
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 515 DDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCE 549
D+C + C + G C+D IN++ C+C F G C+
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35
Score = 45.4 bits (108), Expect = 2e-07
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 437 DDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQ 471
D+C S C +N C+D I ++C C GF G CQ
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35
Score = 42.7 bits (101), Expect = 1e-06
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 482 NPCRNGARCLDHFSHYTCECTPGFSGVNC 510
+PC + RCLD + + CEC GF+G C
Sbjct: 6 SPCLHNGRCLDKINEFQCECPTGFTGHLC 34
Score = 40.4 bits (95), Expect = 1e-05
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 398 DACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCE 433
D C +PC ++G C F CEC G+TG C+
Sbjct: 1 DECASSPCLHNGRCLDKI-NEFQCECPTGFTGHLCQ 35
Score = 37.0 bits (86), Expect = 1e-04
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 359 NACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCE 394
+ C SPC + G C +QC C G+ G C+
Sbjct: 1 DECASSPCLHNGRCLDKINE-FQCECPTGFTGHLCQ 35
Score = 36.6 bits (85), Expect = 2e-04
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 1 NGGTCVDGINDYTCKCEGDFVGKFCE 26
+ G C+D IN++ C+C F G C+
Sbjct: 10 HNGRCLDKINEFQCECPTGFTGHLCQ 35
Score = 25.4 bits (56), Expect = 1.9
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Query: 560 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGK 594
+SPC H NG C N++ C+C G++G
Sbjct: 4 ASSPCLH----NGRCLD--KINEFQCECPTGFTGH 32
Score = 25.4 bits (56), Expect = 2.3
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Query: 37 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGV 71
+SPC H NG C N++ C+C G++G
Sbjct: 4 ASSPCLH----NGRCLD--KINEFQCECPTGFTGH 32
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 45.9 bits (109), Expect = 1e-07
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 477 CAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCTVN 513
C+ NPC + +C++ + C+C G++G C ++
Sbjct: 6 CSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID 42
Score = 43.6 bits (103), Expect = 1e-06
Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 436 IDDCL--SHKCENNATCVDLIQAYECRCAPGFQGEFCQT 472
+D+C ++ CE+ C++ + ++EC+C G+ G C+
Sbjct: 3 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI 41
Score = 41.6 bits (98), Expect = 4e-06
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 514 VDDC--VNHMCQNGGTCVDGINDYTCKCEGDFVGKFCEI 550
VD+C + C++ G C++ + + C+C + G CEI
Sbjct: 3 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI 41
Score = 40.9 bits (96), Expect = 8e-06
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 399 ACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEIN 435
+ NPC ++G C G F C+C GYTG RCEI+
Sbjct: 7 SLGANPCEHAGKCINTL-GSFECQCLQGYTGPRCEID 42
Score = 35.9 bits (83), Expect = 5e-04
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1 NGGTCVDGINDYTCKCEGDFVGKFCEI 27
+ G C++ + + C+C + G CEI
Sbjct: 15 HAGKCINTLGSFECQCLQGYTGPRCEI 41
Score = 34.7 bits (80), Expect = 0.001
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 360 ACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCE 394
+ +PC + G C ++C+C GY G CE
Sbjct: 7 SLGANPCEHAGKCINTLGS-FECQCLQGYTGPRCE 40
Score = 24.7 bits (54), Expect = 4.0
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 6/34 (17%)
Query: 561 TSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGK 594
+PC+H G C + C+C GY+G
Sbjct: 10 ANPCEH----AGKCIN--TLGSFECQCLQGYTGP 37
Score = 24.3 bits (53), Expect = 5.6
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Query: 38 TSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSG 70
+PC+H G C + C+C GY+G
Sbjct: 10 ANPCEH----AGKCIN--TLGSFECQCLQGYTG 36
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 46.1 bits (109), Expect = 2e-07
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 397 IDACYGNPCRNSGTCKLLEE----GRFNCECAPGYTGDRCEINIDDCLSHKCEN 446
C N G C ++++ R+ C+C PG+TG RC N+ + ++ +
Sbjct: 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKA 59
Score = 46.1 bits (109), Expect = 2e-07
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 355 LSKCNACYKSPCTNQGVCEPLPE----RQYQCRCTPGYHGQHCEFMIDACYGNPCRNS 408
L KC K+ C N G C + + +Y C+C PG+ G C + N +
Sbjct: 3 LVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKAE 60
Score = 43.8 bits (103), Expect = 1e-06
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 5/49 (10%)
Query: 434 INIDDCLSHKCENNATC-----VDLIQAYECRCAPGFQGEFCQTKTPFC 477
+ + C N C + Y C+C PGF G C P
Sbjct: 4 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMK 52
Score = 40.0 bits (93), Expect = 3e-05
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 482 NPCRNGARC-----LDHFSHYTCECTPGFSGVNCTVNVDDCVNHMCQN 524
C NG C L + S Y C+C PGF+G CT NV V + +
Sbjct: 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKA 59
Score = 39.2 bits (91), Expect = 5e-05
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Query: 512 VNVDDCVNHMCQNGGTC-----VDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTS 562
V + C NGG C + + Y CKC+ F G C + + + +
Sbjct: 4 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKA 59
Score = 28.0 bits (62), Expect = 0.47
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 1 NGGTC-----VDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTS 39
NGG C + + Y CKC+ F G C + + + +
Sbjct: 16 NGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKA 59
Score = 25.7 bits (56), Expect = 3.1
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 560 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGK 594
+ + C + + + YLCKC PG++G
Sbjct: 10 EKTFCVNGGECFMVKDLS-NPSRYLCKCQPGFTGA 43
Score = 25.3 bits (55), Expect = 4.3
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 37 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSG 70
+ + C + + + YLCKC PG++G
Sbjct: 10 EKTFCVNGGECFMVKDLS-NPSRYLCKCQPGFTG 42
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase
alpha-subunit, C-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 47.8 bits (113), Expect = 2e-07
Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 26/108 (24%)
Query: 222 DLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSL--------------- 266
L++ + L + L ++ L LS+N+L+ ALA L+ L
Sbjct: 4 HLAHKDLTVLCHL--EQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALENVDG 60
Query: 267 -------RIISLHGNDISMIPE-GAFADLHAITHLAIGGNPLYCDCGL 306
+ + L N + + L + GN L + G+
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 108
Score = 45.5 bits (107), Expect = 2e-06
Identities = 18/154 (11%), Positives = 34/154 (22%), Gaps = 38/154 (24%)
Query: 120 LILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPKCT 179
L L ++ + +L + LDL N++ + + +
Sbjct: 3 LHLAHKDLTVLCH---LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 180 CTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNF-TFSP 238
L NN++ +
Sbjct: 60 GV-------------------------------ANLPRLQELLLCNNRLQQSAAIQPLVS 88
Query: 239 LSKLSQLILSYNKLQCIDR---DALAGLKSLRII 269
+L L L N L + L S+ I
Sbjct: 89 CPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122
Score = 42.0 bits (98), Expect = 2e-05
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 110 PKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIED 157
EL+L +N + + + P L+ L+L+ N + E
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 107
Score = 30.8 bits (69), Expect = 0.19
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 267 RIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDC 304
R++ L D++++ L +THL + N L
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALP 36
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 46
Score = 44.8 bits (106), Expect = 3e-07
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 355 LSKCNACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEFMI 397
++KC++ C + + Q CRC GY G CE
Sbjct: 3 ITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEHFF 45
Score = 37.1 bits (86), Expect = 2e-04
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 398 DACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCE 433
+ C + L++ + C C GYTG RCE
Sbjct: 7 SSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42
Score = 31.7 bits (72), Expect = 0.016
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 562 SPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGK 594
S + C +G C + C+C GY+G
Sbjct: 7 SSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGV 39
Score = 31.7 bits (72), Expect = 0.017
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 39 SPCQHHDCKNGICFQPQGSNDYLCKCAPGYSG 70
S + C +G C + C+C GY+G
Sbjct: 7 SSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTG 38
Score = 30.1 bits (68), Expect = 0.066
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 512 VNVDDCVNHMCQNGGTC-VDGINDYTCKCEGDFVGKFCE 549
+N C +G + ++ C+CE + G CE
Sbjct: 4 TKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42
Score = 25.9 bits (57), Expect = 2.0
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 482 NPCRNGARC-LDHFSHYTCECTPGFSGVNC 510
C +G L S C C G++GV C
Sbjct: 12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVRC 41
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 44.9 bits (106), Expect = 4e-07
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 356 SKCNACYKSPCTNQGVCEPLPE-RQYQCRCTPGYHGQHCEF 395
S+C + C + GVC + +Y C C GY G+ C++
Sbjct: 2 SECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 42
Score = 42.6 bits (100), Expect = 2e-06
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 397 IDACYGNPCRNSGTCKLLEEG-RFNCECAPGYTGDRCE 433
+ C + G C +E ++ C C GY G+RC+
Sbjct: 4 CPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 41
Score = 37.5 bits (87), Expect = 2e-04
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 433 EINIDDCLSHKCENNATCVDL--IQAYECRCAPGFQGEFCQTK 473
+ C ++ C+ + + Y C C G+ GE CQ +
Sbjct: 1 DSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 43
Score = 35.6 bits (82), Expect = 7e-04
Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 515 DDCVNHMCQNGGTC--VDGINDYTCKCEGDFVGKFCEIA 551
+ C + G C ++ ++ Y C C ++G+ C+
Sbjct: 5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 43
Score = 34.1 bits (78), Expect = 0.002
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 2/31 (6%)
Query: 482 NPCRNGARC--LDHFSHYTCECTPGFSGVNC 510
C + C ++ Y C C G+ G C
Sbjct: 10 GYCLHDGVCMYIEALDKYACNCVVGYIGERC 40
Score = 28.7 bits (64), Expect = 0.19
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 562 SPCQHHDCKN-GICFQPQGSNDYLCKCAPGYSGK 594
C + G+C + + Y C C GY G+
Sbjct: 5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGE 38
Score = 28.3 bits (63), Expect = 0.25
Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 39 SPCQHHDCKN-GICFQPQGSNDYLCKCAPGYSG 70
C + G+C + + Y C C GY G
Sbjct: 5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIG 37
Score = 28.3 bits (63), Expect = 0.26
Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 1 NGGTC--VDGINDYTCKCEGDFVGKFCEIA 28
+ G C ++ ++ Y C C ++G+ C+
Sbjct: 14 HDGVCMYIEALDKYACNCVVGYIGERCQYR 43
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 44.0 bits (104), Expect = 6e-07
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 515 DDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCE 549
C + C G C++ I +YTC C F G CE
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE 36
Score = 43.2 bits (102), Expect = 1e-06
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 437 DDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQT 472
C C C++ I Y C C PGF G C+
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEY 37
Score = 40.9 bits (96), Expect = 7e-06
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 482 NPCRNGARCLDHFSHYTCECTPGFSGVNC 510
C CL+ +YTC C PGF G C
Sbjct: 7 MSCSKQGECLETIGNYTCSCYPGFYGPEC 35
Score = 40.2 bits (94), Expect = 1e-05
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 398 DACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEINID 437
+C C G C + C C PG+ G CE D
Sbjct: 2 ASCQDMSCSKQGECLETIGN-YTCSCYPGFYGPECEYVRD 40
Score = 37.8 bits (88), Expect = 9e-05
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 359 NACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEFMID 398
+C C+ QG C Y C C PG++G CE++ D
Sbjct: 2 ASCQDMSCSKQGECLETIG-NYTCSCYPGFYGPECEYVRD 40
Score = 35.5 bits (82), Expect = 6e-04
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 1 NGGTCVDGINDYTCKCEGDFVGKFCE 26
G C++ I +YTC C F G CE
Sbjct: 11 KQGECLETIGNYTCSCYPGFYGPECE 36
Score = 26.3 bits (58), Expect = 1.2
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 561 TSPCQHHDCKN-GICFQPQGSNDYLCKCAPGYSGK 594
T+ CQ C G C + +Y C C PG+ G
Sbjct: 1 TASCQDMSCSKQGECLE--TIGNYTCSCYPGFYGP 33
Score = 26.3 bits (58), Expect = 1.4
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 38 TSPCQHHDCKN-GICFQPQGSNDYLCKCAPGYSGV 71
T+ CQ C G C + +Y C C PG+ G
Sbjct: 1 TASCQDMSCSKQGECLE--TIGNYTCSCYPGFYGP 33
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 44.0 bits (104), Expect = 7e-07
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 437 DDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQT 472
C + C + CV+ I Y C+C PGF G C+
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ 37
Score = 43.6 bits (103), Expect = 7e-07
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 515 DDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCE 549
C N C G CV+ IN+YTCKC+ F G CE
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 36
Score = 41.7 bits (98), Expect = 3e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 482 NPCRNGARCLDHFSHYTCECTPGFSGVNCTVNV 514
C C++ ++YTC+C PGFSG+ C V
Sbjct: 7 TSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 39
Score = 41.7 bits (98), Expect = 4e-06
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 398 DACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEINI 436
AC C G C + C+C PG++G +CE +
Sbjct: 2 AACTNTSCSGHGECVETINN-YTCKCDPGFSGLKCEQIV 39
Score = 37.1 bits (86), Expect = 1e-04
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 359 NACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEFMI 397
AC + C+ G C Y C+C PG+ G CE ++
Sbjct: 2 AACTNTSCSGHGECVETINN-YTCKCDPGFSGLKCEQIV 39
Score = 35.1 bits (81), Expect = 9e-04
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 1 NGGTCVDGINDYTCKCEGDFVGKFCE 26
G CV+ IN+YTCKC+ F G CE
Sbjct: 11 GHGECVETINNYTCKCDPGFSGLKCE 36
Score = 27.4 bits (61), Expect = 0.43
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 38 TSPCQHHDCKN-GICFQPQGSNDYLCKCAPGYSGV 71
T+ C + C G C + N+Y CKC PG+SG+
Sbjct: 1 TAACTNTSCSGHGECVE--TINNYTCKCDPGFSGL 33
Score = 27.4 bits (61), Expect = 0.45
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 561 TSPCQHHDCKN-GICFQPQGSNDYLCKCAPGYSGK 594
T+ C + C G C + N+Y CKC PG+SG
Sbjct: 1 TAACTNTSCSGHGECVE--TINNYTCKCDPGFSGL 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor
receptor, N-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 47.1 bits (110), Expect = 7e-07
Identities = 31/163 (19%), Positives = 50/163 (30%), Gaps = 14/163 (8%)
Query: 174 CPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSN 233
CP C R G L + Y+ N + L
Sbjct: 1 CPDACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIEN-----------QQHLQHLEL 49
Query: 234 FTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHL 293
L +L L + + L+ + DA L ++L N + + ++ L
Sbjct: 50 RDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTV-QGLSLQEL 108
Query: 294 AIGGNPLYCDCGLAWLSEWVKR--DYVEPGIARCTEPASMRDK 334
+ GNPL+C C L WL W + V +C +
Sbjct: 109 VLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHM 151
Score = 39.0 bits (89), Expect = 4e-04
Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 88 CPSGCSCDG-TRVDCSQRGLKEIPKDIPLYT--TELILNDNEIGKIKSDGLFGRLPNLIK 144
CP C G + + C++ G + +P TEL + + + + L L
Sbjct: 1 CPDACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRN 60
Query: 145 LDLRRNQVTG 154
L + ++ +
Sbjct: 61 LTIVKSGLRF 70
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 210
Score = 48.1 bits (113), Expect = 8e-07
Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 15/166 (9%)
Query: 118 TELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAF----EGENDQGCLGDNY 173
++I N+++I ++ LPN+ KL L N++T I+ A +
Sbjct: 49 DQIIANNSDIKSVQG---IQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDL 105
Query: 174 CPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSN 233
K ++ L + + + T+ L+ L +
Sbjct: 106 SSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLED 165
Query: 234 FT------FSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHG 273
+ L+KL L LS N + + ALAGLK+L ++ L
Sbjct: 166 NQISDIVPLAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFS 209
Score = 33.4 bits (75), Expect = 0.045
Identities = 22/154 (14%), Positives = 42/154 (27%), Gaps = 3/154 (1%)
Query: 238 PLSKLSQLI-LSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIG 296
++ I + K D L S+ I + +DI + L +T L +
Sbjct: 19 SDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLN 76
Query: 297 GNPLYCDCGLAWLSEWVKRDYVEPGIARCTEPASMRDKLLLTAPASSFQCKEKVSDEILS 356
GN L LA L E + + ++ L+ + +
Sbjct: 77 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 136
Query: 357 KCNACYKSPCTNQGVCEPLPERQYQCRCTPGYHG 390
+ + T+ V L +
Sbjct: 137 ESLYLGNNKITDITVLSRLTKLDTLSLEDNQISD 170
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 47.1 bits (111), Expect = 9e-07
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 223 LSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCID--RDALAGLKSLRIISLHGNDISMIP 280
++ L + +L L LS N+L +D + +L+I++L GN++
Sbjct: 49 RRSSMAATLRI-IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSER 107
Query: 281 EGAFADLHAITHLAIGGNPLYCDC 304
E + L + GN L
Sbjct: 108 ELDKIKGLKLEELWLDGNSLSDTF 131
Score = 36.7 bits (84), Expect = 0.002
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 222 DLSNNQIGFLSNF--TFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMI 279
+LSNN++ L + L L LS N+L+ L + L GN +S
Sbjct: 71 NLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDT 130
Query: 280 PEGAFADLHAITHL 293
+ AI
Sbjct: 131 FRDQSTYISAIRER 144
Score = 28.6 bits (63), Expect = 1.4
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 118 TELILNDNEIGKIKS-DGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCP 175
L L++N + ++ + + PNL L+L N++ + L +
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNS 126
Score = 27.9 bits (61), Expect = 2.4
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 106 LKEIPKDIPLYTTELILNDNEIGKIKSDG------LFGRLPNLIKLD 146
+E+ K L EL L+ N + D + R P L++LD
Sbjct: 106 ERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 43.7 bits (103), Expect = 9e-07
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 356 SKCNACYKSPCTNQGVCEPLPE-RQYQCRCTPGYHGQHCEF 395
C + Y C N GVC + Y C C GY G C+
Sbjct: 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 41.8 bits (98), Expect = 6e-06
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 398 DACYGNPCRNSGTCKLLEE-GRFNCECAPGYTGDRCEI 434
+ Y C N G C +E + C C GY+GDRC+
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 38.7 bits (90), Expect = 6e-05
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 509 NCTVNVDDCVNHMCQNGGTC--VDGINDYTCKCEGDFVGKFCEI 550
N + C NGG C ++ ++ YTC C + G C+
Sbjct: 1 NSYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 36.8 bits (85), Expect = 3e-04
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 432 CEINIDDCLSHKCENNATCVDL--IQAYECRCAPGFQGEFCQTKT 474
C N C+ + + +Y C C G+ G+ CQT+
Sbjct: 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46
Score = 35.2 bits (81), Expect = 0.001
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 482 NPCRNGARC--LDHFSHYTCECTPGFSGVNC 510
C NG C ++ YTC C G+SG C
Sbjct: 12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 33.7 bits (77), Expect = 0.004
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 558 YPQTSPCQHHDCKN-GICFQPQGSNDYLCKCAPGYSGK 594
YP C N G+C + + Y C C GYSG
Sbjct: 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD 40
Score = 33.3 bits (76), Expect = 0.006
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 35 YPQTSPCQHHDCKN-GICFQPQGSNDYLCKCAPGYSG 70
YP C N G+C + + Y C C GYSG
Sbjct: 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSG 39
Score = 31.0 bits (70), Expect = 0.037
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 1 NGGTC--VDGINDYTCKCEGDFVGKFCEI 27
NGG C ++ ++ YTC C + G C+
Sbjct: 16 NGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 42.9 bits (101), Expect = 1e-06
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 400 CYGNPCRNSGTCK-LLEEGRFNCECAPGYTGDRCEINID 437
C C N GTC+ L F C+C G+ G CEI+
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 39
Score = 38.3 bits (89), Expect = 6e-05
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 482 NPCRNGARCLD--HFSHYTCECTPGFSGVNCTVNVD 515
C NG C +FS + C+C GF+G +C ++
Sbjct: 4 PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 39
Score = 36.4 bits (84), Expect = 3e-04
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 517 CVNHMCQNGGTCVDGI--NDYTCKCEGDFVGKFCEI 550
C C NGGTC + +D+ C+C F GK CEI
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI 36
Score = 36.0 bits (83), Expect = 4e-04
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 439 CLSHKCENNATCVDLIQA--YECRCAPGFQGEFCQTKT 474
C +C N TC + + C+C GF G+ C+ T
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 38
Score = 35.2 bits (81), Expect = 7e-04
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 361 CYKSPCTNQGVCEPLPER-QYQCRCTPGYHGQHCEFMIDA 399
C + C N G C+ + C+C G+ G+ CE A
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 40
Score = 29.1 bits (65), Expect = 0.12
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 1 NGGTCVDGI--NDYTCKCEGDFVGKFCEI 27
NGGTC + +D+ C+C F GK CEI
Sbjct: 8 NGGTCQQALYFSDFVCQCPEGFAGKSCEI 36
Score = 26.8 bits (59), Expect = 0.86
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 560 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGK 594
C + G C Q +D++C+C G++GK
Sbjct: 2 SEPRCFN----GGTCQQALYFSDFVCQCPEGFAGK 32
Score = 26.4 bits (58), Expect = 1.3
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 37 QTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSG 70
C + G C Q +D++C+C G++G
Sbjct: 2 SEPRCFN----GGTCQQALYFSDFVCQCPEGFAG 31
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 42.5 bits (100), Expect = 2e-06
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 397 IDACYGNPCRNSGTCKLLEEGRFNCECAP-GYTGDRCEI 434
++ C PC++ G C R+ C+C GY+G C I
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 39.0 bits (91), Expect = 4e-05
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 514 VDDCVNHMCQNGGTCVD-GINDYTCKCEGD-FVGKFCEI 550
V+ C + CQ+ G CV G++ Y C C + G C I
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 38.7 bits (90), Expect = 4e-05
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 359 NACYKSPCTNQGVCEPLPERQYQCRCTP-GYHGQHCE 394
N C PC +QG+C +YQC CT GY G +C
Sbjct: 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39
Score = 36.7 bits (85), Expect = 3e-04
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 436 IDDCLSHKCENNATCVDL-IQAYECRCAP-GFQGEFCQT 472
++ C + C++ CV + Y+C C G+ G C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 32.5 bits (74), Expect = 0.007
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 482 NPCRNGARCLDH-FSHYTCECTP-GFSGVNCTV 512
PC++ C+ Y C+CT G+SG NCT+
Sbjct: 8 YPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 28.6 bits (64), Expect = 0.18
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 1 NGGTCVD-GINDYTCKCEGD-FVGKFCEI 27
+ G CV G++ Y C C + G C I
Sbjct: 12 HQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 26.3 bits (58), Expect = 1.2
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 563 PCQHHDCKNGICFQPQGSNDYLCKCAP-GYSGK 594
PC ++ C++ G + Y C C GYSG
Sbjct: 4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP 36
Score = 25.9 bits (57), Expect = 1.8
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 40 PCQHHDCKNGICFQPQGSNDYLCKCAP-GYSG 70
PC ++ C++ G + Y C C GYSG
Sbjct: 4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSG 35
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 42.5 bits (100), Expect = 2e-06
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 398 DACYGNPCRNSGTCKLLEEGRFNCEC-APGYTGDRCEI 434
+ C NPC+N G C ++ C+C G+ G+ C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 39.0 bits (91), Expect = 4e-05
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 359 NACYKSPCTNQGVCEPLPERQYQCRCT-PGYHGQHCE 394
N C +PC N+G C QY+C CT G++G++C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38
Score = 37.5 bits (87), Expect = 1e-04
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 515 DDCVNHMCQNGGTCVD-GINDYTCKCEGD-FVGKFCEI 550
+ C ++ CQN G C+ G + Y C C F G+ C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 35.2 bits (81), Expect = 8e-04
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 437 DDCLSHKCENNATCVDL-IQAYECRC-APGFQGEFCQT 472
+ C S+ C+N C+ Y+C C GF GE C T
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 33.2 bits (76), Expect = 0.005
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 482 NPCRNGARCLD-HFSHYTCECT-PGFSGVNCTV 512
NPC+N C+ F Y C+CT GF G NCT
Sbjct: 7 NPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 28.6 bits (64), Expect = 0.19
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 1 NGGTCVD-GINDYTCKCEGD-FVGKFCEI 27
N G C+ G + Y C C F G+ C
Sbjct: 11 NRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 26.7 bits (59), Expect = 0.77
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 563 PCQHHDCKNGICFQPQGSNDYLCKC-APGYSGK 594
PC + C+N G + Y C C G+ G+
Sbjct: 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE 35
Score = 26.3 bits (58), Expect = 1.2
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 40 PCQHHDCKNGICFQPQGSNDYLCKC-APGYSG 70
PC + C+N G + Y C C G+ G
Sbjct: 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYG 34
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 50
Score = 41.7 bits (98), Expect = 5e-06
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 356 SKCNACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEF 395
S+C YK C + E+ C C GY G CE
Sbjct: 6 SRCPKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 45
Score = 39.4 bits (92), Expect = 3e-05
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 400 CYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCE 433
Y + C ++ E +C C GY G RCE
Sbjct: 11 QYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCE 44
Score = 31.3 bits (71), Expect = 0.028
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 515 DDCVNHMCQNGGTC-VDGINDYTCKCEGDFVGKFCE 549
H C G V +C C+ ++G CE
Sbjct: 9 PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCE 44
Score = 29.8 bits (67), Expect = 0.081
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 482 NPCRNGARC-LDHFSHYTCECTPGFSGVNC 510
+ C G + +C C G+ G C
Sbjct: 14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARC 43
Score = 27.9 bits (62), Expect = 0.37
Identities = 10/41 (24%), Positives = 12/41 (29%), Gaps = 1/41 (2%)
Query: 437 DDCLSHKCENNATC-VDLIQAYECRCAPGFQGEFCQTKTPF 476
H C V Q C C G+ G C+ F
Sbjct: 9 PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCERVDLF 49
Score = 27.1 bits (60), Expect = 0.90
Identities = 9/32 (28%), Positives = 9/32 (28%)
Query: 39 SPCQHHDCKNGICFQPQGSNDYLCKCAPGYSG 70
H C G C C C GY G
Sbjct: 9 PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIG 40
Score = 27.1 bits (60), Expect = 0.90
Identities = 9/32 (28%), Positives = 9/32 (28%)
Query: 562 SPCQHHDCKNGICFQPQGSNDYLCKCAPGYSG 593
H C G C C C GY G
Sbjct: 9 PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIG 40
Score = 26.0 bits (57), Expect = 1.7
Identities = 7/27 (25%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 1 NGGTC-VDGINDYTCKCEGDFVGKFCE 26
G V +C C+ ++G CE
Sbjct: 18 KGRCRFVVAEQTPSCVCDEGYIGARCE 44
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo
sapiens) [TaxId: 9606]}
Length = 49
Score = 40.6 bits (95), Expect = 1e-05
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 355 LSKCNACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEF 395
+ C + C + + E + C C GY G CE
Sbjct: 4 FNDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCEH 44
Score = 39.0 bits (91), Expect = 5e-05
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 400 CYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCE 433
+ C + L++E + C C GY G RCE
Sbjct: 10 SHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 43
Score = 30.6 bits (69), Expect = 0.043
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 515 DDCVNHMCQNGGTC-VDGINDYTCKCEGDFVGKFCEIAPFVA 555
D C +G + + C C +VG CE A +A
Sbjct: 8 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCEHADLLA 49
Score = 29.4 bits (66), Expect = 0.12
Identities = 8/33 (24%), Positives = 10/33 (30%)
Query: 562 SPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGK 594
C +G C + C C GY G
Sbjct: 8 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGA 40
Score = 29.4 bits (66), Expect = 0.12
Identities = 8/32 (25%), Positives = 10/32 (31%)
Query: 39 SPCQHHDCKNGICFQPQGSNDYLCKCAPGYSG 70
C +G C + C C GY G
Sbjct: 8 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVG 39
Score = 28.3 bits (63), Expect = 0.33
Identities = 8/30 (26%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 482 NPCRNGARC-LDHFSHYTCECTPGFSGVNC 510
C +G L C C G+ G C
Sbjct: 13 QFCFHGTCRFLVQEDKPACVCHSGYVGARC 42
Score = 26.3 bits (58), Expect = 1.7
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 1 NGGTC-VDGINDYTCKCEGDFVGKFCEIAPFVA 32
+G + + C C +VG CE A +A
Sbjct: 17 HGTCRFLVQEDKPACVCHSGYVGARCEHADLLA 49
Score = 25.9 bits (57), Expect = 2.2
Identities = 7/39 (17%), Positives = 12/39 (30%), Gaps = 1/39 (2%)
Query: 437 DDCLSHKCENNATC-VDLIQAYECRCAPGFQGEFCQTKT 474
D + C + + C C G+ G C+
Sbjct: 8 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCEHAD 46
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes
[TaxId: 1639]}
Length = 227
Score = 42.3 bits (98), Expect = 7e-05
Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 17/186 (9%)
Query: 118 TELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPK 177
T L + I+ L NLI L+L+ NQ+T + + + L N
Sbjct: 44 TTLSAFGTGVTTIEG---VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNV 100
Query: 178 CTCTVRVLFYDGRAGECYIAVELF----------SSRIRVSYYVGNYPVSTMYRDLSNNQ 227
I + + T + LS
Sbjct: 101 SAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGN 160
Query: 228 IGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADL 287
+ LSKL+ L NK+ I LA L +L + L N IS + A+
Sbjct: 161 AQVSDLTPLANLSKLTTLKADDNKISDIS--PLASLPNLIEVHLKNNQISDVSP--LANT 216
Query: 288 HAITHL 293
+ +
Sbjct: 217 SNLFIV 222
Score = 30.4 bits (67), Expect = 0.45
Identities = 14/124 (11%), Positives = 31/124 (25%)
Query: 33 MMYPQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGVEEFRTRYAGDCLIDAACPSGC 92
+ + + + + + L S
Sbjct: 88 TELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPL 147
Query: 93 SCDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQV 152
+ S + ++L + KI LPNLI++ L+ NQ+
Sbjct: 148 AGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQI 207
Query: 153 TGIE 156
+ +
Sbjct: 208 SDVS 211
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 38.3 bits (89), Expect = 9e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 396 MIDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEINID 437
+ C C + GTC G F+C+C G+ G C+ +
Sbjct: 7 LEHPCASLCCGH-GTCIDGI-GSFSCDCRSGWEGRFCQREVS 46
Score = 37.1 bits (86), Expect = 2e-04
Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 470 CQTKTPFCAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCTVNVD 515
C C +G C+D ++C+C G+ G C V
Sbjct: 2 CLVLPLEHPCASLCCGHG-TCIDGIGSFSCDCRSGWEGRFCQREVS 46
Score = 35.2 bits (81), Expect = 0.001
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 431 RCEIN--IDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQT 472
+C + C S C + TC+D I ++ C C G++G FCQ
Sbjct: 1 QCLVLPLEHPCASLCCGH-GTCIDGIGSFSCDCRSGWEGRFCQR 43
Score = 34.4 bits (79), Expect = 0.002
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 514 VDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCEI 550
C + C +G TC+DGI ++C C + G+FC+
Sbjct: 8 EHPCASLCCGHG-TCIDGIGSFSCDCRSGWEGRFCQR 43
Score = 33.6 bits (77), Expect = 0.004
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 353 EILSKCNACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEFMID 398
+L + C C + G C + C C G+ G+ C+ +
Sbjct: 3 LVLPLEHPCASLCCGH-GTCIDGIGS-FSCDCRSGWEGRFCQREVS 46
Score = 29.8 bits (67), Expect = 0.094
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 3 GTCVDGINDYTCKCEGDFVGKFCEI 27
GTC+DGI ++C C + G+FC+
Sbjct: 19 GTCIDGIGSFSCDCRSGWEGRFCQR 43
Score = 28.6 bits (64), Expect = 0.25
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 559 PQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGK 594
P PC C +G C G + C C G+ G+
Sbjct: 6 PLEHPCASLCCGHGTCI--DGIGSFSCDCRSGWEGR 39
Score = 27.8 bits (62), Expect = 0.34
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 36 PQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGV 71
P PC C +G C G + C C G+ G
Sbjct: 6 PLEHPCASLCCGHGTCI--DGIGSFSCDCRSGWEGR 39
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 55
Score = 37.6 bits (87), Expect = 2e-04
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 365 PCTNQGVCEPLPERQYQ--CRCTPGYHGQHCEFMIDACYGNPCRNSGTCK 412
PC C +P+ + C G G+ CE D +G+P ++G +
Sbjct: 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVR 51
Score = 26.0 bits (57), Expect = 2.2
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 404 PCRNSGTCKLLEEGRFN--CECAPGYTGDRCEINIDDCLSHKCENNATC 450
PC +C ++ + + C G G RCE+ D +N
Sbjct: 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPV 50
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 41.1 bits (94), Expect = 3e-04
Identities = 37/388 (9%), Positives = 78/388 (20%), Gaps = 14/388 (3%)
Query: 222 DLSNNQIGFLSNFTFSP-LSKLSQLILSYNKLQCID----RDALAGLKSLRIISLHGNDI 276
D+ ++ P L + + L L AL +L ++L N++
Sbjct: 8 DIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNEL 67
Query: 277 S-----MIPEGAFADLHAITHLAIGGNPLYCDCGLAWLSEWVKRDYVEPGIARCTEPASM 331
+ +G I L++ L S ++
Sbjct: 68 GDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDA 127
Query: 332 RDKLLLTAPASSFQCKEKVSDEILSKCNACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQ 391
+LL EK+ E S A + + E +
Sbjct: 128 GLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVR 187
Query: 392 HCEFMIDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGDRCEINIDDCLSHKCENNATCV 451
+ G + C + ++ + + +
Sbjct: 188 VLCQGLKDSPCQLEALKLESC----GVTSDNCRDLCGIVASKASLRELALGSNKLGDVGM 243
Query: 452 DLIQAYECRCAPGFQGEFCQTKTPFCAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCT 511
+ + + + G + CR G G
Sbjct: 244 AELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLL 303
Query: 512 VNVDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKN 571
++ C + + + C+
Sbjct: 304 CETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQG 363
Query: 572 GICFQPQGSNDYLCKCAPGYSGKESLLQ 599
+L C S SL
Sbjct: 364 LGQPGSVLRVLWLADCDVSDSSCSSLAA 391
Score = 30.3 bits (66), Expect = 0.75
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 9/58 (15%)
Query: 222 DLSNNQIG-----FLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLK----SLRIIS 270
DLSNN +G L P L QL+L D L L+ SLR+IS
Sbjct: 403 DLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
Score = 28.4 bits (61), Expect = 2.6
Identities = 13/148 (8%), Positives = 31/148 (20%), Gaps = 3/148 (2%)
Query: 10 NDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYS 69
+ + + + + + + S
Sbjct: 264 ECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCS 323
Query: 70 GVEEFRTRYAGDCLIDAACPSGCSCDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGK 129
+ ++ + + D R L + L L D ++
Sbjct: 324 FTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 383
Query: 130 IKSDGL---FGRLPNLIKLDLRRNQVTG 154
L +L +LDL N +
Sbjct: 384 SSCSSLAATLLANHSLRELDLSNNCLGD 411
Score = 27.6 bits (59), Expect = 4.4
Identities = 6/38 (15%), Positives = 11/38 (28%)
Query: 118 TELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGI 155
L + E+ + L L + L +T
Sbjct: 5 QSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEA 42
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia
pestis [TaxId: 632]}
Length = 353
Score = 41.0 bits (94), Expect = 3e-04
Identities = 16/82 (19%), Positives = 25/82 (30%), Gaps = 8/82 (9%)
Query: 219 MYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISM 278
N L +L +S NKL + A L + N ++
Sbjct: 263 PPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELP----ALPPRLERLIASFNHLAE 318
Query: 279 IPEGAFADLHAITHLAIGGNPL 300
+PE + L + NPL
Sbjct: 319 VPE----LPQNLKQLHVEYNPL 336
Score = 39.8 bits (91), Expect = 7e-04
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 222 DLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPE 281
++SNN++ L +L +LI S+N L + ++L+ + + N + P+
Sbjct: 290 NVSNNKLIELPAL----PPRLERLIASFNHLAEVPEL----PQNLKQLHVEYNPLREFPD 341
Score = 36.0 bits (81), Expect = 0.013
Identities = 14/134 (10%), Positives = 32/134 (23%), Gaps = 6/134 (4%)
Query: 24 FCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGYSGVEEFRTRYAGDCL 83
+ + + + + + + Y
Sbjct: 214 NLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASS 273
Query: 84 IDAACPSGCSCDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLI 143
+ ++ S L E+P P LI + N + ++ NL
Sbjct: 274 NEIRSLCDLPPSLEELNVSNNKLIELPALPP-RLERLIASFNHLAEVPEL-----PQNLK 327
Query: 144 KLDLRRNQVTGIED 157
+L + N + D
Sbjct: 328 QLHVEYNPLREFPD 341
Score = 30.6 bits (67), Expect = 0.57
Identities = 9/59 (15%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 97 TRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGI 155
++ + GL +P+ P + L+ + N + ++ +L L + N + +
Sbjct: 41 HELELNNLGLSSLPELPP-HLESLVASCNSLTELPEL-----PQSLKSLLVDNNNLKAL 93
Score = 28.6 bits (62), Expect = 2.4
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 8/59 (13%)
Query: 222 DLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIP 280
+L+N + L L L+ S N L + +SL+ + + N++ +
Sbjct: 44 ELNNLGLSSLPEL----PPHLESLVASCNSLTELP----ELPQSLKSLLVDNNNLKALS 94
Score = 28.3 bits (61), Expect = 3.2
Identities = 16/257 (6%), Positives = 44/257 (17%), Gaps = 6/257 (2%)
Query: 240 SKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNP 299
+ +L L+ L + L + N ++ +PE L ++
Sbjct: 38 RQAHELELNNLGLSSLPEL----PPHLESLVASCNSLTELPE-LPQSLKSLLVDNNNLKA 92
Query: 300 LYCDCGLAWLSEWVKRDYVEPGIARCTEPASMRDKLLLTAPASSFQCKEKVSDEILSKCN 359
L L + + + + D + +
Sbjct: 93 LSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDLPPSLEFIAAGNNQ 151
Query: 360 ACYKSPCTNQGVCEPLPERQYQCRCTPGYHGQHCEFMIDACYGNPCRNSGTCKLLEEGRF 419
N + + P + L
Sbjct: 152 LEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYA 211
Query: 420 NCECAPGYTGDRCEINIDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQTKTPFCAG 479
+ + + + + + + +
Sbjct: 212 DNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNA 271
Query: 480 EYNPCRNGARCLDHFSH 496
N R+
Sbjct: 272 SSNEIRSLCDLPPSLEE 288
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 36.8 bits (84), Expect = 0.003
Identities = 22/140 (15%), Positives = 34/140 (24%), Gaps = 3/140 (2%)
Query: 247 LSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDCGL 306
L+ ++ R + L G I +I E A L + N + G
Sbjct: 3 LTAELIE--QAAQYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLDGF 59
Query: 307 AWLSEWVKRDYVEPGIARCTEPASMRDKLLLTAPASSFQCKEKVSDEILSKCNACYKSPC 366
L I R E L ++ E + L+ +
Sbjct: 60 PLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCI 119
Query: 367 TNQGVCEPLPERQYQCRCTP 386
V R Y P
Sbjct: 120 LRNPVTNKKHYRLYVIYKVP 139
Score = 26.1 bits (56), Expect = 8.3
Identities = 16/133 (12%), Positives = 35/133 (26%), Gaps = 13/133 (9%)
Query: 136 FGRLPNLIKLDLRRNQVTGIEDNAFEG----------ENDQGCL-GDNYCPPKCTCTVRV 184
+ +LDLR ++ IE N +N+ L G T V
Sbjct: 14 YTNAVRDRELDLRGYKIPVIE-NLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNN 72
Query: 185 LFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQ 244
A+ + I + + L + + +
Sbjct: 73 NRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRL 132
Query: 245 LILSY-NKLQCID 256
++ +++ +D
Sbjct: 133 YVIYKVPQVRVLD 145
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 199
Score = 36.2 bits (82), Expect = 0.006
Identities = 26/176 (14%), Positives = 43/176 (24%), Gaps = 19/176 (10%)
Query: 118 TELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFEGENDQGCLGDNYCPPK 177
T L + I I L NL +++ NQ+T I + + +N
Sbjct: 43 TTLQADRLGIKSIDG---VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI 99
Query: 178 CTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFS 237
I + + + + S
Sbjct: 100 TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSS 159
Query: 238 PLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHL 293
Q D LA L +L + + N +S I A L + L
Sbjct: 160 N--------------QVTDLKPLANLTTLERLDISSNKVSDISV--LAKLTNLESL 199
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 32.4 bits (74), Expect = 0.008
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 434 INIDDCLSHKCENNATCVDLIQAYECRCAPGFQG 467
+++D+C + C++ +Y C C G+
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL 36
Score = 27.0 bits (60), Expect = 0.65
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 397 IDACYGNPCRNSGTCKLLEEGRFNCECAPGYTGD 430
+D C G C + G + CEC GY
Sbjct: 5 MDECKEPDVCKHGQCINTD-GSYRCECPFGYILA 37
Score = 25.9 bits (57), Expect = 1.6
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 512 VNVDDCVNHMCQNGGTCVDGINDYTCKCEGDFVG 545
V++D+C G C++ Y C+C ++
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL 36
Score = 25.1 bits (55), Expect = 3.9
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 480 EYNPCRNGARCLDHFSHYTCECTPGFSG 507
+ +C++ Y CEC G+
Sbjct: 9 KEPDVCKHGQCINTDGSYRCECPFGYIL 36
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor,
HBEGF {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 31.2 bits (71), Expect = 0.019
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 358 CNACYKSPCTNQGVCEPLPE-RQYQCRCTPGYHGQHCEFM 396
C YK C + G C+ + E R C C PGYHG+ C +
Sbjct: 2 CLRKYKDFCIH-GECKYVKELRAPSCICHPGYHGERCHGL 40
Score = 28.9 bits (65), Expect = 0.13
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Query: 40 PCQHHD---CKNGICFQPQGSNDYLCKCAPGYSGV 71
PC C +G C + C C PGY G
Sbjct: 1 PCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGE 35
Score = 28.9 bits (65), Expect = 0.13
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 563 PCQHHD---CKNGICFQPQGSNDYLCKCAPGYSGK 594
PC C +G C + C C PGY G+
Sbjct: 1 PCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGE 35
Score = 27.0 bits (60), Expect = 0.69
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 409 GTCKLLEE-GRFNCECAPGYTGDRCE 433
G CK ++E +C C PGY G+RC
Sbjct: 13 GECKYVKELRAPSCICHPGYHGERCH 38
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 30.6 bits (69), Expect = 0.034
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 441 SHKCENNATCVDLIQAYECRCAPGFQG 467
H+C +A C D + CRC + G
Sbjct: 6 RHQCSVHAECRDYATGFCCRCVANYTG 32
Score = 29.0 bits (65), Expect = 0.12
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 477 CAGEYNPCRNGARCLDHFSHYTCECTPGFS--GVNCT 511
CA + C A C D+ + + C C ++ G C
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV 38
Score = 23.6 bits (51), Expect = 10.0
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 519 NHMCQNGGTCVDGINDYTCKCEGDFVG 545
H C C D + C+C ++ G
Sbjct: 6 RHQCSVHAECRDYATGFCCRCVANYTG 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 198
Score = 33.5 bits (75), Expect = 0.042
Identities = 22/188 (11%), Positives = 47/188 (25%), Gaps = 10/188 (5%)
Query: 96 GTRVDCSQRGLKEIPKDIPLYTTELILNDNEIGKIKSDGLFGRLPNLIKLDLRRNQVTGI 155
T + + R +E + ++ L+ K D L L L N + I
Sbjct: 4 ATTIKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI 63
Query: 156 EDNAFEG-----ENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYY 210
+ G G + + + Y
Sbjct: 64 S--SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLY 121
Query: 211 VGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIIS 270
+ N ++ + L + + + L N + + L +L+
Sbjct: 122 MSNNKITNWGEIDKLAALDKLEDLLLA-GNPLYNDYKENNATSEYRIEVVKRLPNLKK-- 178
Query: 271 LHGNDISM 278
L G + +
Sbjct: 179 LDGMPVDV 186
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 313
Score = 34.0 bits (76), Expect = 0.048
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 247 LSYNKLQCIDRDALAGLKSLRIISLHGNDIS-MIPEGAFADLHAITHLAIGGNPLYC 302
L N++ L LK L +++ N++ IP+ +L A N C
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ--GGNLQRFDVSAYANNKCLC 305
Score = 30.9 bits (68), Expect = 0.38
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 219 MYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCIDRDALAGLKSLRIISLHGN 274
DL NN+I + L L L +S+N L C + L+ + + N
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL-CGEIPQGGNLQRFDVSAYANN 301
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 344
Score = 33.7 bits (75), Expect = 0.063
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 11/74 (14%)
Query: 219 MYRDLSNNQIG------FLSNFTFSPLSKLSQLILSYNKLQCIDRDALA-----GLKSLR 267
L++ + + F+ L L L YN+++ L + L
Sbjct: 246 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 305
Query: 268 IISLHGNDISMIPE 281
+ L+GN S +
Sbjct: 306 FLELNGNRFSEEDD 319
Score = 29.8 bits (65), Expect = 0.83
Identities = 23/161 (14%), Positives = 43/161 (26%), Gaps = 6/161 (3%)
Query: 100 DCSQRGLKEIPKDIPLYT--TELILNDNEIGKIKSDGL---FGRLPNLIKLDLRRNQVTG 154
+ K + + E++L+ N IG + L +L +
Sbjct: 14 AITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGR 73
Query: 155 IEDNAFEGENDQGCLGDNYCPPKCTCTVRVLFYDGRAGECYIAVELFSSRIRVSYYVGNY 214
++D E CP T + + A E I + + Y N
Sbjct: 74 VKDEIPEALRLLLQALLK-CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNG 132
Query: 215 PVSTMYRDLSNNQIGFLSNFTFSPLSKLSQLILSYNKLQCI 255
++ N L +I N+L+
Sbjct: 133 LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG 173
Score = 29.8 bits (65), Expect = 0.85
Identities = 19/157 (12%), Positives = 43/157 (27%), Gaps = 7/157 (4%)
Query: 9 INDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGSNDYLCKCAPGY 68
+ + + K + + H G+ + + L +
Sbjct: 170 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTH 229
Query: 69 SGVEEFRTRYAGDCLIDAACPSGCSCDGTRVDCSQRGLKEIPKDIPLYTTELILNDNEIG 128
G + + C + + K + L L NEI
Sbjct: 230 LGSSALAIALKSWPNLRELGLNDCLLSA---RGAAAVVDAFSKLENIGLQTLRLQYNEIE 286
Query: 129 ----KIKSDGLFGRLPNLIKLDLRRNQVTGIEDNAFE 161
+ + ++P+L+ L+L N+ + +D E
Sbjct: 287 LDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDE 323
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 28.3 bits (63), Expect = 0.30
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Query: 430 DRCEINIDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQTKT 474
D C I+ D C CV+ +EC+C G++ F K
Sbjct: 4 DECRISPDLC------GRGQCVNTPGDFECKCDEGYESGFMMMKN 42
Score = 25.2 bits (55), Expect = 3.2
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 477 CAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCT 511
C + C G +C++ + C+C G+
Sbjct: 6 CRISPDLCGRG-QCVNTPGDFECKCDEGYESGFMM 39
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 30.5 bits (67), Expect = 0.49
Identities = 17/176 (9%), Positives = 38/176 (21%)
Query: 405 CRNSGTCKLLEEGRFNCECAPGYTGDRCEINIDDCLSHKCENNATCVDLIQAYECRCAPG 464
C+ L G + + S A + C
Sbjct: 103 CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD 162
Query: 465 FQGEFCQTKTPFCAGEYNPCRNGARCLDHFSHYTCECTPGFSGVNCTVNVDDCVNHMCQN 524
++ +GA C+D + T T G + ++ + +
Sbjct: 163 GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD 222
Query: 525 GGTCVDGINDYTCKCEGDFVGKFCEIAPFVAMMYPQTSPCQHHDCKNGICFQPQGS 580
+ + + + + + H C + F G
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGK 278
>d1dyka2 b.29.1.4 (A:2933-3117) Laminin alpha2 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 185
Score = 30.2 bits (67), Expect = 0.50
Identities = 9/83 (10%), Positives = 23/83 (27%)
Query: 184 VLFYDGRAGECYIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQIGFLSNFTFSPLSKLS 243
VL + +E+ ++ G + +Y + + +
Sbjct: 40 VLLGVSSQKMDGMGIEMIDEKLMFHVDNGAGRFTAIYDAEIPGHMCNGQWHKVTAKKIKN 99
Query: 244 QLILSYNKLQCIDRDALAGLKSL 266
+L L + Q + + S
Sbjct: 100 RLELVVDGNQVDAQSPNSASTSA 122
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 27.2 bits (60), Expect = 0.73
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 430 DRCEINIDDC-LSHKCENNATCVDLIQAYECRCAPGFQ 466
D C + + C + + Y C C PG++
Sbjct: 5 DECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE 42
Score = 24.5 bits (53), Expect = 7.5
Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Query: 470 CQTKTPFCAGEYNPCRNGARCLDHFSHYTCECTPGFS----GVNCTV 512
C +++ E + C ++ Y C C PG+ +C
Sbjct: 7 CASRSKSGE-EDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS)
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 327
Score = 30.1 bits (66), Expect = 0.82
Identities = 15/210 (7%), Positives = 39/210 (18%), Gaps = 2/210 (0%)
Query: 367 TNQGVCEPLPERQYQCRCTPGYHGQHCEFMIDACYGNPCRNSGTCKLLEEGRFNCECAPG 426
++G E + + Y P R + +
Sbjct: 67 VDKGGREVTLIPEATPSTVRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNAD 126
Query: 427 YTGDRCEINIDDCLSHKCENNATCVDLIQAYECRCAPGFQGEFCQTKTPFCAGEYNPCRN 486
G + ++ + E T ++
Sbjct: 127 IFGSDSPEADAEVIALASSILDRLGLQDIYEIRINSRKIMEEIIGGMTSSD--PFSVFSI 184
Query: 487 GARCLDHFSHYTCECTPGFSGVNCTVNVDDCVNHMCQNGGTCVDGINDYTCKCEGDFVGK 546
R + V++ + + + + +
Sbjct: 185 IDRYHKISREEFVDQLRSAGIGEDGVSMIADLCSGTRGIDEMARITGKSSEEIARMAAVE 244
Query: 547 FCEIAPFVAMMYPQTSPCQHHDCKNGICFQ 576
+ V + S + GI F+
Sbjct: 245 DLLASYGVKNVRYDFSIVRGLSYYTGIVFE 274
>d1pj5a4 d.250.1.1 (A:428-742) N,N-dimethylglycine oxidase domain 3
{Arthrobacter globiformis [TaxId: 1665]}
Length = 315
Score = 29.9 bits (66), Expect = 0.85
Identities = 13/153 (8%), Positives = 22/153 (14%), Gaps = 7/153 (4%)
Query: 452 DLIQAYECRCAPGFQGEFCQTKTPFCAGEYNPCRNGARCLD--HFSHYTCECTPGFSGVN 509
L + P +P A E R D +
Sbjct: 37 LLKEMPAEWLPPARDAWSGMFSSPIAAAEAWKTRTAVAMYDMTPLKRLEVSGPGALKLLQ 96
Query: 510 CTVNVDDCVNHMCQNGGTCVDGINDY-----TCKCEGDFVGKFCEIAPFVAMMYPQTSPC 564
D +D + D A
Sbjct: 97 ELTTADLAKKPGAVTYTLLLDHAGGVRSDITVARLSEDTFQLGANGNIDTAYFERAARHQ 156
Query: 565 QHHDCKNGICFQPQGSNDYLCKCAPGYSGKESL 597
+ C G ++ +
Sbjct: 157 TQSGSATDWVQVRDTTGGTCCIGLWGPLARDLV 189
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 26.4 bits (58), Expect = 1.3
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 436 IDDCLSHKCENNATCVDLIQAYECRCAPGFQG 467
+++CL + CV+ +Y C C P F+
Sbjct: 3 VNECLDPTTCISGNCVNTPGSYICDCPPDFEL 34
>d1dyka1 b.29.1.4 (A:2744-2932) Laminin alpha2 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 189
Score = 28.6 bits (63), Expect = 1.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 184 VLFYDGRAGEC-YIAVELFSSRIRVSYYVGNYPVSTMYRDLSNN 226
+LFY R + V+L + SY +G+ STM N+
Sbjct: 54 LLFYMARINHADFATVQLRNGFPYFSYDLGSGDTSTMIPTKIND 97
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 25.3 bits (55), Expect = 3.3
Identities = 6/37 (16%), Positives = 11/37 (29%), Gaps = 1/37 (2%)
Query: 430 DRCEINIDDCLSHKCENNATCVDLIQAYECRCAPGFQ 466
+R ++ C + C + C C G
Sbjct: 5 ERTTLSNGGC-QYLCLPAPQINPHSPKFTCACPDGML 40
>d1pz7a_ b.29.1.4 (A:) Agrin {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 195
Score = 27.6 bits (60), Expect = 3.4
Identities = 9/38 (23%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 184 VLFYDGRAGEC--YIAVELFSSRIRVSYYVGNYPVSTM 219
++ + G+ E YIA+ + +++ Y +G+ PV
Sbjct: 58 LILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPVVLR 95
>d1d2sa_ b.29.1.4 (A:) Sex hormone-binding globulin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 170
Score = 26.6 bits (58), Expect = 5.6
Identities = 5/45 (11%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Query: 184 VLFYDGRAGEC-YIAVELFSSRIRVSYYVGNYPVSTMYRDLSNNQ 227
V+FY + + + L R + + ++ ++
Sbjct: 42 VIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDG 86
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 24.4 bits (53), Expect = 5.7
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 6/37 (16%)
Query: 430 DRCEINIDDCLSHKCENNATCVDLIQAYECRCAPGFQ 466
D C+ + C C + +Y C C PG Q
Sbjct: 3 DECQRDPLLC------RGGVCHNTEGSYRCECPPGHQ 33
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 24.4 bits (53), Expect = 6.9
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 6/37 (16%)
Query: 430 DRCEINIDDCLSHKCENNATCVDLIQAYECRCAPGFQ 466
D C+ C KC N +++CRC G+
Sbjct: 4 DECQELPGLCQGGKCIN------TFGSFQCRCPTGYY 34
>d1x6va1 b.122.1.3 (A:229-389) ATP sulfurylase N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 161
Score = 26.4 bits (58), Expect = 7.1
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 241 KLSQLILSYNKLQCIDRDALAGLKSLRIISLHGNDISMIPEGAFADLH 288
++ +L + NKL DA L +L+I + + ++ EG L+
Sbjct: 5 EVKELYVPENKLHLAKTDA-ETLPALKINKVDMQWVQVLAEGWATPLN 51
>d1mx3a2 c.23.12.1 (A:27-125,A:319-352) Transcription corepressor
CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}
Length = 133
Score = 25.7 bits (56), Expect = 9.1
Identities = 12/61 (19%), Positives = 20/61 (32%)
Query: 255 IDRDALAGLKSLRIISLHGNDISMIPEGAFADLHAITHLAIGGNPLYCDCGLAWLSEWVK 314
+ R+ L K+LRII G+ I + DL + + E +
Sbjct: 55 LTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVYSEQASIEMREEAAR 114
Query: 315 R 315
Sbjct: 115 E 115
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 23.9 bits (52), Expect = 9.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 437 DDCLSHKCENNATCVDLIQAYECRCAPGFQ 466
++CL + + C DL YEC C GFQ
Sbjct: 3 NECLDNNGGCSHVCNDLKIGYECLCPDGFQ 32
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 24.0 bits (52), Expect = 9.4
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 436 IDDCLSHKCENNATCVDLIQAYECRCAPGFQG 467
ID+C + + C +L +EC C P
Sbjct: 2 IDEC-ENGGFCSGVCHNLPGTFECICGPDSAL 32
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.140 0.472
Gapped
Lambda K H
0.267 0.0376 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,456,443
Number of extensions: 132331
Number of successful extensions: 1139
Number of sequences better than 10.0: 1
Number of HSP's gapped: 917
Number of HSP's successfully gapped: 459
Length of query: 604
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 513
Effective length of database: 1,158,166
Effective search space: 594139158
Effective search space used: 594139158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.3 bits)