BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15409
(149 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 34/38 (89%)
Query: 2 TLQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TLQK ++FIGTPYWMAPEVV+CET +D PYD+K DIWS
Sbjct: 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 34/38 (89%)
Query: 2 TLQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TLQK ++FIGTPYWMAPEVV+CET +D PYD+K DIWS
Sbjct: 162 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS 199
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 34/38 (89%)
Query: 2 TLQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
T+Q+ ++FIGTPYWMAPEVV+CET +D PYD+K D+WS
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 33/37 (89%)
Query: 3 LQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+Q+ ++FIGTPYWMAPEVV+CET +D PYD+K D+WS
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 33/37 (89%)
Query: 3 LQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+Q+ ++FIGTPYWMAPEVV+CET +D PYD+K D+WS
Sbjct: 163 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 199
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 3 LQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+Q+ + FIGTPYWMAPEVV+CET +D PYD+K D+WS
Sbjct: 189 IQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 2 TLQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
T+ + NTFIGTPYWMAPEV+ C+ D YDFK D+WS
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K N F+GTP+WMAPEV+ + + YDFK DIWS
Sbjct: 172 KRNXFVGTPFWMAPEVI-----KQSAYDFKADIWS 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K NTF+GTP+WMAPEV+ + + YD K DIWS
Sbjct: 180 KRNTFVGTPFWMAPEVI-----KQSAYDSKADIWS 209
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K NTF+GTP+WMAPEV+ + + YD K DIWS
Sbjct: 160 KRNTFVGTPFWMAPEVI-----KQSAYDSKADIWS 189
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
N F+GTPYWMAPEV+L + YD KVD+WS
Sbjct: 208 NXFVGTPYWMAPEVIL--AMDEGQYDGKVDVWS 238
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
N F+GTPYWMAPEV+L + YD KVD+WS
Sbjct: 169 NXFVGTPYWMAPEVIL--AMDEGQYDGKVDVWS 199
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K NTF+GTP+WMAPEV+ + + YD K DIWS
Sbjct: 176 KRNTFVGTPFWMAPEVI-----QQSAYDSKADIWS 205
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K N F+GTP+WMAPEV+ + + YD K DIWS
Sbjct: 160 KRNXFVGTPFWMAPEVI-----KQSAYDSKADIWS 189
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K N F+GTP+WMAPEV+ + + YD K DIWS
Sbjct: 175 KRNXFVGTPFWMAPEVI-----KQSAYDSKADIWS 204
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 4/34 (11%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
TF+GTP WMAPEV+ E R YDFK DIWS+
Sbjct: 184 KTFVGTPCWMAPEVM--EQVRG--YDFKADIWSF 213
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 4/34 (11%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
TF+GTP WMAPEV+ E R YDFK DIWS+
Sbjct: 179 KTFVGTPCWMAPEVM--EQVRG--YDFKADIWSF 208
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K +T +GTPYWMAPEVV Y KVDIWS
Sbjct: 173 KRSTMVGTPYWMAPEVV-----TRKAYGPKVDIWS 202
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K +T +GTPYWMAPEVV Y KVDIWS
Sbjct: 172 KRSTMVGTPYWMAPEVV-----TRKAYGPKVDIWS 201
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K +GTPYWMAPEV+ PY +VDIWS
Sbjct: 197 KRKXLVGTPYWMAPEVI-----SRLPYGTEVDIWS 226
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K + +GTPYWMAPEVV Y KVDIWS
Sbjct: 172 KRSXMVGTPYWMAPEVV-----TRKAYGPKVDIWS 201
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K + +GTPYWMAPEVV Y KVDIWS
Sbjct: 173 KRSXMVGTPYWMAPEVV-----TRKAYGPKVDIWS 202
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K + +GTPYWMAPEVV Y KVDIWS
Sbjct: 172 KRSEMVGTPYWMAPEVV-----TRKAYGPKVDIWS 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 3 LQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ K N IGTP+WMAPEV+ ++ Y+ DIWS
Sbjct: 179 MAKRNXVIGTPFWMAPEVI-----QEIGYNCVADIWS 210
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K +GTPYWMAPEV+ + Y +VDIWS
Sbjct: 197 KRKXLVGTPYWMAPEVI-----SRSLYATEVDIWS 226
>pdb|2JD4|A Chain A, Mouse Laminin Alpha1 Chain, Domains Lg4-5
pdb|2JD4|B Chain B, Mouse Laminin Alpha1 Chain, Domains Lg4-5
Length = 383
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 73 IISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVPLDPVGMEA 132
++SDGK+HTV+ I + + VD S S+T G L + +Y+GG+P
Sbjct: 99 LLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGKATTLDVERKLYLGGLP-------- 150
Query: 133 FTHWHLRNLTSF 144
+H+ RN+ +
Sbjct: 151 -SHYRARNIGTI 161
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVP 124
+ DGK+HT++ L VD + R+ + + + P+YVGG P
Sbjct: 280 LCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGYP 330
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ +GTPYWMAPE++ PY +VDIWS
Sbjct: 183 RRKXLVGTPYWMAPELI-----SRLPYGPEVDIWS 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ +GTPYWMAPE++ PY +VDIWS
Sbjct: 303 RRKXLVGTPYWMAPELI-----SRLPYGPEVDIWS 332
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ +GTPYWMAPE++ PY +VDIWS
Sbjct: 181 RRKXLVGTPYWMAPELI-----SRLPYGPEVDIWS 210
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ +GTPYWMAPE++ PY +VDIWS
Sbjct: 226 RRKXLVGTPYWMAPELI-----SRLPYGPEVDIWS 255
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ +GTPYWMAPE++ PY +VDIWS
Sbjct: 176 RRKXLVGTPYWMAPELI-----SRLPYGPEVDIWS 205
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ +GTPYWMAPE++ PY +VDIWS
Sbjct: 172 RRKXLVGTPYWMAPELI-----SRLPYGPEVDIWS 201
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 5/32 (15%)
Query: 8 TFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ +GTPY+M+PE + +N Y+FK DIWS
Sbjct: 195 SLVGTPYYMSPERI-----HENGYNFKSDIWS 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
+K T +G PYWMAPE++ YD KVD++S+
Sbjct: 177 KKRYTVVGNPYWMAPEMI-----NGRSYDEKVDVFSF 208
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 2 TLQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
T++ IGTPY+++PE+ CE + PY+ K DIW+
Sbjct: 178 TVELARACIGTPYYLSPEI--CE---NKPYNNKSDIWA 210
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + +NP+ F+ D++SY
Sbjct: 196 GSVLWMAPEVIRMQD--NNPFSFQSDVYSY 223
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNP-YDFKVDIWS 39
+K + GTP ++APE++ C ++P Y +VD+WS
Sbjct: 178 EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 2 TLQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
T + GTP WMAPEV RD P + K D++S+
Sbjct: 192 TFLSSKSAAGTPEWMAPEV-----LRDEPSNEKSDVYSF 225
>pdb|1OKQ|A Chain A, Laminin Alpha 2 Chain Lg4-5 Domain Pair, Ca1 Site Mutant
Length = 394
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVPLD 126
I+DG++H ++++ + + L VD +S++I+ + + L + +YVGG+P++
Sbjct: 114 INDGQWHKIKIVRVKQEGILYVDDASSQTISPK-KADILAVVGILYVGGLPIN 165
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 8 TFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TF+GTPY+M+P E Y+ K DIWS
Sbjct: 175 TFVGTPYYMSP-----EQMNRMSYNEKSDIWS 201
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
GTP WMAPEV RD P + K D++S+
Sbjct: 201 GTPEWMAPEV-----LRDEPSNEKSDVYSF 225
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T GTP ++APE VLC+ + F+VDIWS
Sbjct: 197 ERKKTLCGTPNYIAPE-VLCK----KGHSFEVDIWS 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNP-YDFKVDIWS 39
+K GTP ++APE++ C ++P Y +VD+WS
Sbjct: 178 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
>pdb|1DYK|A Chain A, Laminin Alpha 2 Chain Lg4-5 Domain Pair
Length = 394
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVPLD 126
I+DG++H ++++ + + L VD +S++I+ + + L + +YVGG+P++
Sbjct: 114 INDGQWHKIKIVRVKQEGILYVDDASSQTISPK-KADILDVVGILYVGGLPIN 165
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNP-YDFKVDIWS 39
+K GTP ++APE++ C ++P Y +VD+WS
Sbjct: 165 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 201
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 184 GSILWMAPEVIRMQD--SNPYSFQSDVYAF 211
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 184 GSILWMAPEVIRMQD--SNPYSFQSDVYAF 211
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+GTP++MAPEVV + PY VD+W
Sbjct: 196 VGTPHFMAPEVV-----KREPYGKPVDVWG 220
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 172 GSILWMAPEVIRMQD--SNPYSFQSDVYAF 199
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 196 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 223
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 195 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 222
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 196 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 223
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 188 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 215
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+GTP++MAPEVV + PY VD+W
Sbjct: 194 VGTPHFMAPEVV-----KREPYGKPVDVWG 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+GTP++MAPEVV + PY VD+W
Sbjct: 194 VGTPHFMAPEVV-----KREPYGKPVDVWG 218
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 170 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 197
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 173 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 200
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 173 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 200
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 168 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 195
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 168 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 195
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
G+ WMAPEV+ + NPY F+ D++++
Sbjct: 168 GSILWMAPEVIRMQD--KNPYSFQSDVYAF 195
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV+ R +PY VDIW+
Sbjct: 193 FAGTPGYLSPEVL-----RKDPYGKPVDIWA 218
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
K N F GTP ++APE++L + Y+ VD WS+
Sbjct: 174 KTNXFCGTPDYIAPEILLGQK-----YNHSVDWWSF 204
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
K N F GTP ++APE++L + Y+ VD WS+
Sbjct: 175 KTNEFCGTPDYIAPEILLGQK-----YNHSVDWWSF 205
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+TF GTP ++APEV+ PYD VD W
Sbjct: 197 STFCGTPEYLAPEVL-----HKQPYDRTVDWWC 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNP-YDFKVDIWS 39
+K GTP ++APE++ C +P Y +VD+W+
Sbjct: 254 EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWA 290
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Query: 8 TFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F+GTPY+M+P E Y+ K DIWS
Sbjct: 175 AFVGTPYYMSP-----EQMNRMSYNEKSDIWS 201
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV+ + +PY VDIW+
Sbjct: 190 FAGTPGYLSPEVL-----KKDPYSKPVDIWA 215
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F+GTPY+M+P E Y+ K DIWS
Sbjct: 176 FVGTPYYMSP-----EQMNRMSYNEKSDIWS 201
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV+ R +PY VD+W+
Sbjct: 184 FAGTPGYLSPEVL-----RKDPYGKPVDLWA 209
>pdb|2R16|A Chain A, Crystal Structure Of Bovine Neurexin 1 Alpha LnsLG DOMAIN
4 (With No Splice Insert)
Length = 182
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 20/83 (24%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLH----------SPMYVGGV 123
++D ++HTV ++ GK+ L VD + +++T + + +H RL Y+ V
Sbjct: 84 LNDNEWHTVRVVRRGKSLKLTVD--DQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSV 141
Query: 124 PLDPVGMEAFTHWHLRNLTSFNG 146
P + +G HL++LT FNG
Sbjct: 142 PSNFIG-------HLQSLT-FNG 156
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+TF GTP ++APE++ R Y F VD W+
Sbjct: 211 STFCGTPNYIAPEIL-----RGEDYGFSVDWWA 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV+ R +PY VD+W+
Sbjct: 173 FAGTPGYLSPEVL-----RKDPYGKPVDLWA 198
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ GTP ++APEV LC+ + F+VDIWS
Sbjct: 197 ERKKXLCGTPNYIAPEV-LCK----KGHSFEVDIWS 227
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
IGT Y++APEV+ YD K D+WS
Sbjct: 212 IGTAYYIAPEVL------HGTYDEKCDVWS 235
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+K IGT Y++APEV+ YD K D+WS
Sbjct: 207 KKMKDKIGTAYYIAPEVL------HGTYDEKCDVWS 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV+ R +PY VD+W+
Sbjct: 166 FAGTPGYLSPEVL-----RKDPYGKPVDMWA 191
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TF GTP ++APEV+ DN Y VD W
Sbjct: 310 KTFCGTPEYLAPEVL-----EDNDYGRAVDWWG 337
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TF GTP ++APEV+ DN Y VD W
Sbjct: 307 KTFCGTPEYLAPEVL-----EDNDYGRAVDWWG 334
>pdb|3R05|A Chain A, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), With
Splice Insert Ss3
pdb|3R05|B Chain B, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), With
Splice Insert Ss3
Length = 1254
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 20/83 (24%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLH----------SPMYVGGV 123
++D ++HTV ++ GK+ L VD + +++T + + +H RL Y+ V
Sbjct: 746 LNDNEWHTVRVVRRGKSLKLTVD--DQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSV 803
Query: 124 PLDPVGMEAFTHWHLRNLTSFNG 146
P + +G HL++LT FNG
Sbjct: 804 PSNFIG-------HLQSLT-FNG 818
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 70 SYEIISDGKYHTVEMLAIGKTFTLRVD 96
S II+DGKYH V G TL+VD
Sbjct: 1145 SNAIINDGKYHVVRFTRSGGNATLQVD 1171
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVPLDPVGM 130
++DG+++ V+ G++ T+ V+ + T G +E L L +Y+GG+P + G+
Sbjct: 512 VNDGEWYHVDFQRDGRSGTISVNTLRT-PYTAPGESEILDLDDELYLGGLPENKAGL 567
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 27/51 (52%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVP 124
++DG +H V + + TL +D ++ + + + + S ++VGG+P
Sbjct: 79 VNDGAWHNVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLP 129
>pdb|3QCW|A Chain A, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), No
Splice Inserts
pdb|3QCW|B Chain B, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), No
Splice Inserts
Length = 1245
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 20/83 (24%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLH----------SPMYVGGV 123
++D ++HTV ++ GK+ L VD + +++T + + +H RL Y+ V
Sbjct: 737 LNDNEWHTVRVVRRGKSLKLTVD--DQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSV 794
Query: 124 PLDPVGMEAFTHWHLRNLTSFNG 146
P + +G HL++LT FNG
Sbjct: 795 PSNFIG-------HLQSLT-FNG 809
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 70 SYEIISDGKYHTVEMLAIGKTFTLRVD 96
S II+DGKYH V G TL+VD
Sbjct: 1136 SNAIINDGKYHVVRFTRSGGNATLQVD 1162
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVPLDPVGM 130
++DG+++ V+ G++ T+ V+ + T G +E L L +Y+GG+P + G+
Sbjct: 512 VNDGEWYHVDFQRDGRSGTISVNTLRT-PYTAPGESEILDLDDELYLGGLPENKAGL 567
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 27/51 (52%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVP 124
++DG +H V + + TL +D ++ + + + + S ++VGG+P
Sbjct: 79 VNDGAWHNVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLP 129
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
IGT Y++APEV+ YD K D+WS
Sbjct: 189 IGTAYYIAPEVL------HGTYDEKCDVWS 212
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
GT MAPEVV+ P D KVDIWS
Sbjct: 234 GTETHMAPEVVM-----GKPCDAKVDIWS 257
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ GTP ++APEV LC+ + F+VDIWS
Sbjct: 197 ERKKDLCGTPNYIAPEV-LCK----KGHSFEVDIWS 227
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
GT MAPEVV+ P D KVDIWS
Sbjct: 232 GTETHMAPEVVM-----GKPCDAKVDIWS 255
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
GT MAPEVV+ P D KVDIWS
Sbjct: 218 GTETHMAPEVVM-----GKPCDAKVDIWS 241
>pdb|3POY|A Chain A, Crystal Structure Of The Alpha-Neurexin-1 Ectodomain, Lns
2-6
Length = 1019
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 20/83 (24%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLH----------SPMYVGGV 123
++D ++HTV ++ GK+ L VD + +++T + + +H RL Y+ V
Sbjct: 521 LNDNEWHTVRVVRRGKSLKLTVD--DQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSV 578
Query: 124 PLDPVGMEAFTHWHLRNLTSFNG 146
P + +G HL++LT FNG
Sbjct: 579 PSNFIG-------HLQSLT-FNG 593
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 70 SYEIISDGKYHTVEMLAIGKTFTLRVD 96
S II+DGKYH V G TL+VD
Sbjct: 920 SNAIINDGKYHVVRFTRSGGNATLQVD 946
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVPLDPVGM 130
++DG+++ V+ G++ T+ V+ + T G +E L L +Y+GG+P + G+
Sbjct: 287 VNDGEWYHVDFQRDGRSGTISVNTLRT-PYTAPGESEILDLDDELYLGGLPENKAGL 342
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV+ R +PY VD+W+
Sbjct: 166 FAGTPGYLSPEVL-----RKDPYGKPVDMWA 191
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TF GTP ++APEV+ DN Y VD W
Sbjct: 166 KTFCGTPEYLAPEVL-----EDNDYGRAVDWWG 193
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ GTP ++APEV LC+ + F+VDIWS
Sbjct: 181 ERKKDLCGTPNYIAPEV-LCK----KGHSFEVDIWS 211
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TF GTP ++APEV+ DN Y VD W
Sbjct: 163 KTFCGTPEYLAPEVL-----EDNDYGRAVDWWG 190
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TF GTP ++APEV+ DN Y VD W
Sbjct: 163 KTFCGTPEYLAPEVL-----EDNDYGRAVDWWG 190
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T GTP ++APEV+ + F+VD+WS
Sbjct: 172 ERKKTLCGTPNYIAPEVL-----SKKGHSFEVDVWS 202
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T GTP ++APEV+ + F+VD+WS
Sbjct: 172 ERKKTLCGTPNYIAPEVL-----SKKGHSFEVDVWS 202
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T GTP ++APEV+ + F+VD+WS
Sbjct: 176 ERKKTLCGTPNYIAPEVL-----SKKGHSFEVDVWS 206
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
IGT Y++APEV+ YD K D+WS
Sbjct: 195 IGTAYYIAPEVL------HGTYDEKCDVWS 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
IGT Y++APEV+ YD K D+WS
Sbjct: 184 IGTAYYIAPEVL------RGTYDEKCDVWS 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV+ + +PY VDIW+
Sbjct: 167 FAGTPGYLSPEVL-----KKDPYSKPVDIWA 192
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
IGT Y++APEV+ YD K D+WS
Sbjct: 184 IGTAYYIAPEVL------RGTYDEKCDVWS 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV+ + +PY VDIW+
Sbjct: 167 FAGTPGYLSPEVL-----KKDPYSKPVDIWA 192
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV+ + +PY VDIW+
Sbjct: 166 FAGTPGYLSPEVL-----KKDPYSKPVDIWA 191
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.0 bits (66), Expect = 0.48, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+K IGT Y++APEV+ YD K D+WS
Sbjct: 183 KKXKDKIGTAYYIAPEVL------HGTYDEKCDVWS 212
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 30.0 bits (66), Expect = 0.51, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K + GTP +MAPE++L E YDF VD ++
Sbjct: 345 KTKGYAGTPGFMAPELLLGEE-----YDFSVDYFA 374
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 30.0 bits (66), Expect = 0.51, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K + GTP +MAPE++L E YDF VD ++
Sbjct: 345 KTKGYAGTPGFMAPELLLGEE-----YDFSVDYFA 374
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 30.0 bits (66), Expect = 0.51, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K + GTP +MAPE++L E YDF VD ++
Sbjct: 345 KTKGYAGTPGFMAPELLLGEE-----YDFSVDYFA 374
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 30.0 bits (66), Expect = 0.51, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
K + GTP +MAPE++L E YDF VD ++
Sbjct: 345 KTKGYAGTPGFMAPELLLGEE-----YDFSVDYFA 374
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 1 MTLQKHNTFIGTPYWMAPEVVLCETFRDNP--YDFKVDIWS 39
+T + T G+ +MAPEVV E F D YD + D+WS
Sbjct: 173 ITTPELTTPCGSAEYMAPEVV--EVFTDQATFYDKRCDLWS 211
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 29.6 bits (65), Expect = 0.68, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
IGT Y++APEV+ YD K D+WS
Sbjct: 184 IGTAYYIAPEVL------RGTYDEKCDVWS 207
>pdb|3ASI|A Chain A, Alpha-Neurexin-1 Ectodomain Fragment; Lns5-Egf3-Lns6
Length = 410
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 55 KFKELDRPVRLEASTSYEIISDGKYHTVEMLAIGKTFTLRVD 96
KF + +E S + II+DGKYH V G TL+VD
Sbjct: 291 KFNVGTDDIAIEESNA--IINDGKYHVVRFTRSGGNATLQVD 330
>pdb|2R1D|A Chain A, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
pdb|2R1D|B Chain B, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
pdb|2R1D|C Chain C, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
pdb|2R1D|D Chain D, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
pdb|2R1D|E Chain E, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
pdb|2R1D|F Chain F, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
pdb|2R1D|G Chain G, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
pdb|2R1D|H Chain H, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
pdb|2R1D|I Chain I, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
pdb|2R1D|W Chain W, Crystal Structure Of Rat Neurexin 1beta In The Ca2+
Containing Form
Length = 226
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 55 KFKELDRPVRLEASTSYEIISDGKYHTVEMLAIGKTFTLRVD 96
KF + +E S + II+DGKYH V G TL+VD
Sbjct: 105 KFNVGTDDIAIEESNA--IINDGKYHVVRFTRSGGNATLQVD 144
>pdb|3SH4|A Chain A, Laminin G Like Domain 3 From Human Perlecan
pdb|3SH5|A Chain A, Calcium-Bound Laminin G Like Domain 3 From Human Perlecan
Length = 195
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 69 TSYEIISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVP 124
S + I+DG++H V L G+ +++VD S + G + +Y+GG P
Sbjct: 87 VSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAP 142
>pdb|2WQZ|C Chain C, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|D Chain D, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|C Chain C, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|D Chain D, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 179
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 55 KFKELDRPVRLEASTSYEIISDGKYHTVEMLAIGKTFTLRVD 96
KF + +E S + II+DGKYH V G TL+VD
Sbjct: 72 KFNVGTDDIAIEESNA--IINDGKYHVVRFTRSGGNATLQVD 111
>pdb|3BIW|E Chain E, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|F Chain F, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|G Chain G, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|H Chain H, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
Length = 243
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 55 KFKELDRPVRLEASTSYEIISDGKYHTVEMLAIGKTFTLRVD 96
KF + +E S + II+DGKYH V G TL+VD
Sbjct: 119 KFNVGTDDIAIEESNA--IINDGKYHVVRFTRSGGNATLQVD 158
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+GT Y++APEV+ YD K D+WS
Sbjct: 184 LGTAYYIAPEVL------RKKYDEKCDVWS 207
>pdb|1C4R|A Chain A, The Structure Of The Ligand-Binding Domain Of Neurexin
1beta: Regulation Of Lns Domain Function By Alternative
Splicing
pdb|1C4R|B Chain B, The Structure Of The Ligand-Binding Domain Of Neurexin
1beta: Regulation Of Lns Domain Function By Alternative
Splicing
pdb|1C4R|C Chain C, The Structure Of The Ligand-Binding Domain Of Neurexin
1beta: Regulation Of Lns Domain Function By Alternative
Splicing
pdb|1C4R|D Chain D, The Structure Of The Ligand-Binding Domain Of Neurexin
1beta: Regulation Of Lns Domain Function By Alternative
Splicing
pdb|1C4R|E Chain E, The Structure Of The Ligand-Binding Domain Of Neurexin
1beta: Regulation Of Lns Domain Function By Alternative
Splicing
pdb|1C4R|F Chain F, The Structure Of The Ligand-Binding Domain Of Neurexin
1beta: Regulation Of Lns Domain Function By Alternative
Splicing
pdb|1C4R|G Chain G, The Structure Of The Ligand-Binding Domain Of Neurexin
1beta: Regulation Of Lns Domain Function By Alternative
Splicing
pdb|1C4R|H Chain H, The Structure Of The Ligand-Binding Domain Of Neurexin
1beta: Regulation Of Lns Domain Function By Alternative
Splicing
Length = 182
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 55 KFKELDRPVRLEASTSYEIISDGKYHTVEMLAIGKTFTLRVD 96
KF + +E S + II+DGKYH V G TL+VD
Sbjct: 71 KFNVGTDDIAIEESNA--IINDGKYHVVRFTRSGGNATLQVD 110
>pdb|2R1B|A Chain A, Crystal Structure Of Rat Neurexin 1beta With A Splice
Insert At Ss#4
pdb|2R1B|B Chain B, Crystal Structure Of Rat Neurexin 1beta With A Splice
Insert At Ss#4
Length = 220
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 70 SYEIISDGKYHTVEMLAIGKTFTLRVD 96
S II+DGKYH V G TL+VD
Sbjct: 90 SNAIINDGKYHVVRFTRSGGNATLQVD 116
>pdb|3MW3|A Chain A, Crystal Structure Of Beta-Neurexin 2 With The Splice
Insert 4
Length = 208
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 73 IISDGKYHTVEMLAIGKTFTLRVD 96
I+SDGKYH V G TL+VD
Sbjct: 87 IVSDGKYHVVRFTRSGGNATLQVD 110
>pdb|3B3Q|E Chain E, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|F Chain F, Crystal Structure Of A Synaptic Adhesion Complex
Length = 197
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 55 KFKELDRPVRLEASTSYEIISDGKYHTVEMLAIGKTFTLRVD 96
KF + +E S + II+DGKYH V G TL+VD
Sbjct: 79 KFNVGTDDIAIEESNA--IINDGKYHVVRFTRSGGNATLQVD 118
>pdb|3MW2|A Chain A, Crystal Structure Of Beta-Neurexin 1 With The Splice
Insert 4
pdb|3MW2|B Chain B, Crystal Structure Of Beta-Neurexin 1 With The Splice
Insert 4
Length = 207
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 70 SYEIISDGKYHTVEMLAIGKTFTLRVD 96
S II+DGKYH V G TL+VD
Sbjct: 83 SNAIINDGKYHVVRFTRSGGNATLQVD 109
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F+ T Y+ APEV+L +++N VDIWS
Sbjct: 187 FVVTRYYRAPEVILGMGYKEN-----VDIWS 212
>pdb|3VKF|C Chain C, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|D Chain D, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 181
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 55 KFKELDRPVRLEASTSYEIISDGKYHTVEMLAIGKTFTLRVD 96
KF + +E S + II+DGKYH V G TL+VD
Sbjct: 70 KFNVGTDDIAIEESNA--IINDGKYHVVRFTRSGGNATLQVD 109
>pdb|3BOP|A Chain A, Structure Of Mouse Beta-neurexin 2d4
pdb|3BOP|B Chain B, Structure Of Mouse Beta-neurexin 2d4
pdb|3BOP|C Chain C, Structure Of Mouse Beta-neurexin 2d4
Length = 175
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 73 IISDGKYHTVEMLAIGKTFTLRVD 96
I+SDGKYH V G TL+VD
Sbjct: 84 IVSDGKYHVVRFTRSGGNATLQVD 107
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 6 HNTFIGTPYWMAPEVVLCETFRDNPYDF--KVDIWSY 40
+N +GT +MAPE VL ET + + +D +VDIW++
Sbjct: 203 NNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAF 238
>pdb|3BOD|A Chain A, Structure Of Mouse Beta-Neurexin 1
Length = 178
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 70 SYEIISDGKYHTVEMLAIGKTFTLRVD 96
S II+DGKYH V G TL+VD
Sbjct: 84 SNAIINDGKYHVVRFTRSGGNATLQVD 110
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.3 bits (64), Expect = 0.89, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+K +GT Y++APEV+ YD K D+WS
Sbjct: 193 KKMKERLGTAYYIAPEVL------RKKYDEKCDVWS 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 6 HNTFIGTPYWMAPEVVLCETFRDNPYDF--KVDIWSY 40
+N +GT +MAPE VL ET + + +D +VDIW++
Sbjct: 174 NNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAF 209
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 6 HNTFIGTPYWMAPEVVLCETFRDNPYDF--KVDIWSY 40
+N +GT +MAPE VL ET + + +D +VDIW++
Sbjct: 174 NNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAF 209
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.9 bits (63), Expect = 1.0, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+GT Y++APEV+ YD K D+WS
Sbjct: 167 LGTAYYIAPEVL------RKKYDEKCDVWS 190
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDF-KVDIWS 39
K +TF G+P + APE+ F+ YD +VD+WS
Sbjct: 166 KLDTFCGSPPYAAPEL-----FQGKKYDGPEVDVWS 196
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+T GTP ++APEV+ PY VD WS
Sbjct: 180 STACGTPGYVAPEVLA-----QKPYSKAVDCWS 207
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP ++APEV+ DN Y VD W
Sbjct: 170 FCGTPEYLAPEVL-----EDNDYGRAVDWWG 195
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP ++APEV+ DN Y VD W
Sbjct: 169 FCGTPEYLAPEVL-----EDNDYGRAVDWWG 194
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ F GTP ++APE++ R Y F VD W+
Sbjct: 179 SXFCGTPNYIAPEIL-----RGEDYGFSVDWWA 206
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ GTP ++APEV+ + F+VD+WS
Sbjct: 170 ERKKVLCGTPNYIAPEVL-----SKKGHSFEVDVWS 200
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
F GTP ++APE++ + PY VD W+Y
Sbjct: 180 FCGTPDYIAPEIIAYQ-----PYGKSVDWWAY 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP ++APEV+ DN Y VD W
Sbjct: 171 FCGTPEYLAPEVL-----EDNDYGRAVDWWG 196
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 28.5 bits (62), Expect = 1.3, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 223 YVVTRYYRAPEVILGMGYKEN-----VDIWS 248
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+T GTP ++APEV+ PY VD WS
Sbjct: 165 STACGTPGYVAPEVL-----AQKPYSKAVDCWS 192
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ GTP ++APEV+ + F+VD+WS
Sbjct: 196 ERKKVLCGTPNYIAPEVL-----SKKGHSFEVDVWS 226
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 4 QKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ GTP ++APEV+ + F+VD+WS
Sbjct: 194 ERKKVLCGTPNYIAPEVL-----SKKGHSFEVDVWS 224
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDF-KVDIWS 39
K +TF G+P + APE+ F+ YD +VD+WS
Sbjct: 168 KLDTFCGSPPYAAPEL-----FQGKKYDGPEVDVWS 198
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDF-KVDIWS 39
K +TF G+P + APE+ F+ YD +VD+WS
Sbjct: 168 KLDTFCGSPPYAAPEL-----FQGKKYDGPEVDVWS 198
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 6/31 (19%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKV-DIWS 39
+GTP ++APEV+L + YD KV D+WS
Sbjct: 177 VGTPAYIAPEVLLKKE-----YDGKVADVWS 202
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDF-KVDIWS 39
K +TF G+P + APE+ F+ YD +VD+WS
Sbjct: 168 KLDTFCGSPPYAAPEL-----FQGKKYDGPEVDVWS 198
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ F GTP ++APE++ R Y F VD W+
Sbjct: 164 SXFCGTPNYIAPEIL-----RGEDYGFSVDWWA 191
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP ++APEV+ DN Y VD W
Sbjct: 165 FCGTPEYLAPEVL-----EDNDYGRAVDWWG 190
>pdb|2UUW|A Chain A, 2.75 Angstrom Structure Of The D347g D348g Mutant
Structure Of Sapporo Virus Rdrp Polymerase
pdb|2WK4|A Chain A, Dimeric Structure Of D347g D348g Mutant Of The
Sapporovirus Rna Dependent Rna Polymerase
pdb|2WK4|B Chain B, Dimeric Structure Of D347g D348g Mutant Of The
Sapporovirus Rna Dependent Rna Polymerase
Length = 515
Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 20 VVLCETFRDNPYDFK--VDIWSYKKEHILKMSWR--DKAKFKELDRPVR---LEASTSYE 72
V L TF P+ + +DI S ++ + R D + DR R LE + +Y
Sbjct: 391 VFLKRTFTQTPHGIRALLDITSITRQFYWLKANRTSDPSSPPAFDRQARSAQLENALAY- 449
Query: 73 IISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVPLDPVGMEA 132
H M + ++ G + N + L ++ ++GG DPVG
Sbjct: 450 ----ASQHGPVMFDTVRQIAIKTAQGEGLVLVNTNYDQALATYNAWFIGGTVPDPVGHTE 505
Query: 133 FTH 135
TH
Sbjct: 506 GTH 508
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP ++APEV+ DN Y VD W
Sbjct: 165 FCGTPEYLAPEVL-----EDNDYGRAVDWWG 190
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKV-DIWS 39
+GTP ++APEV+L YD KV D+WS
Sbjct: 176 VGTPAYIAPEVLL-----KKEYDGKVADVWS 201
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDF-KVDIWS 39
K +TF G+P + APE+ F+ YD +VD+WS
Sbjct: 169 KLDTFCGSPPYAAPEL-----FQGKKYDGPEVDVWS 199
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP ++APEV+ DN Y VD W
Sbjct: 165 FCGTPEYLAPEVL-----EDNDYGRAVDWWG 190
>pdb|2CKW|A Chain A, The 2.3 A Resolution Structure Of The Sapporo Virus Rna
Dependant Rna Polymerase
Length = 515
Score = 28.5 bits (62), Expect = 1.5, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 20 VVLCETFRDNPYDFK--VDIWSYKKEHILKMSWR--DKAKFKELDRPVR---LEASTSYE 72
V L TF P+ + +DI S ++ + R D + DR R LE + +Y
Sbjct: 391 VFLKRTFTQTPHGIRALLDITSITRQFYWLKANRTSDPSSPPAFDRQARSAQLENALAY- 449
Query: 73 IISDGKYHTVEMLAIGKTFTLRVDHGNSRSITNEGSTEHLRLHSPMYVGGVPLDPVGMEA 132
H M + ++ G + N + L ++ ++GG DPVG
Sbjct: 450 ----ASQHGPVMFDTVRQIAIKTAQGEGLVLVNTNYDQALATYNAWFIGGTVPDPVGHTE 505
Query: 133 FTH 135
TH
Sbjct: 506 GTH 508
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ F GTP ++APE++ R Y F VD W+
Sbjct: 168 SXFCGTPNYIAPEIL-----RGEDYGFSVDWWA 195
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 5 KHNTFIGTPYWMAPEVVLCETFRDNPYDF-KVDIWS 39
K +TF G+P + APE+ F+ YD +VD+WS
Sbjct: 161 KLDTFCGSPPYAAPEL-----FQGKKYDGPEVDVWS 191
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP ++APEV+ DN Y VD W
Sbjct: 170 FCGTPEYLAPEVL-----EDNDYGRAVDWWG 195
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKV-DIWS 39
+GTP ++APEV+L YD KV D+WS
Sbjct: 177 VGTPAYIAPEVLL-----KKEYDGKVADVWS 202
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+T GTP ++APEV+ PY VD WS
Sbjct: 176 STACGTPGYVAPEVL-----AQKPYSKAVDCWS 203
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKV-DIWS 39
+GTP ++APEV+L YD KV D+WS
Sbjct: 177 VGTPAYIAPEVLL-----KKEYDGKVADVWS 202
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKV-DIWS 39
+GTP ++APEV+L YD KV D+WS
Sbjct: 177 VGTPAYIAPEVLL-----KKEYDGKVADVWS 202
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
F GTP +++PEV R Y VDIW+
Sbjct: 166 FAGTPGYLSPEV-----LRKEAYGKPVDIWA 191
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+T GTP ++APEV+ PY VD WS
Sbjct: 176 STACGTPGYVAPEVL-----AQKPYSKAVDCWS 203
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+T GTP ++APEV+ PY VD WS
Sbjct: 176 STACGTPGYVAPEVL-----AQKPYSKAVDCWS 203
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 178 YVVTRYYRAPEVILGMGYKEN-----VDIWS 203
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 8 TFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
T G+ +MAPEVV + + YD + D+WS
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWS 211
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+T GTP ++APEV+ PY VD WS
Sbjct: 176 STACGTPGYVAPEVL-----AQKPYSKAVDCWS 203
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 8 TFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
T G+ +MAPEVV + + YD + D+WS
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWS 211
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 186 YVVTRYYRAPEVILGMGYKEN-----VDIWS 211
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 223 YVVTRYYRAPEVILGMGYKEN-----VDIWS 248
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 186 YVVTRYYRAPEVILGMGYKEN-----VDIWS 211
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 186 YVVTRYYRAPEVILGMGYKEN-----VDIWS 211
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 6/31 (19%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKV-DIWS 39
+GTP ++APEV+L + YD K+ D+WS
Sbjct: 178 VGTPAYIAPEVLLRQE-----YDGKIADVWS 203
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 184 YVVTRYYRAPEVILGMGYKEN-----VDIWS 209
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 185 YVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 179 YVVTRYYRAPEVILGMGYKEN-----VDIWS 204
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 179 YVVTRYYRAPEVILGMGYKEN-----VDIWS 204
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 178 YVVTRYYRAPEVILGMGYKEN-----VDIWS 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 7 NTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
N+F+GT +MAP E + Y + DIWS
Sbjct: 171 NSFVGTRSYMAP-----ERLQGTHYSVQSDIWS 198
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
F GTP ++APE++ + PY VD W++
Sbjct: 502 FCGTPDYIAPEIIAYQ-----PYGKSVDWWAF 528
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VDIWS
Sbjct: 183 YVVTRYYRAPEVILGMGYKEN-----VDIWS 208
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 8 TFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
T GTPY++APEV+ + Y K D WS
Sbjct: 233 TKAGTPYFVAPEVL---NTTNESYGPKCDAWS 261
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 1 MTLQKHNTFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
M +KH T GTP +++PE+ + + + D+WS
Sbjct: 164 MPHEKHYTLCGTPNYISPEIA-----TRSAHGLESDVWS 197
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
F GTP ++APE++ + PY VD W++
Sbjct: 181 FCGTPDYIAPEIIAYQ-----PYGKSVDWWAF 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 27.3 bits (59), Expect = 3.2, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+GT Y++APEV+ Y+ K D+WS
Sbjct: 209 LGTAYYIAPEVL------KKKYNEKCDVWS 232
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 8 TFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
T GTP ++APE++L + Y+ VD W+
Sbjct: 218 TLCGTPEYLAPEIILSKG-----YNKAVDWWA 244
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 11 GTPYWMAPEVVLCETFRDNPYDFKVDIWSY 40
GTP ++APEVV + PY+ +D WS+
Sbjct: 165 GTPDYIAPEVVSTK-----PYNKSIDWWSF 189
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 8 TFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
T GTP ++APE++L + Y+ VD W+
Sbjct: 198 TLCGTPEYLAPEIILSKG-----YNKAVDWWA 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 10/37 (27%)
Query: 8 TFIGTP-----YWMAPEVVLCETFRDNPYDFKVDIWS 39
+F+ TP Y+ APEV+L +++N VDIWS
Sbjct: 179 SFMMTPEVVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VD+WS
Sbjct: 190 YVVTRYYRAPEVILGMGYKEN-----VDLWS 215
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 9 FIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
++ T Y+ APEV+L +++N VD+WS
Sbjct: 179 YVVTRYYRAPEVILGMGYKEN-----VDLWS 204
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 232 TPYYVAPEVLGPEK-----YDKSCDMWS 254
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 8 TFIGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
T GTP ++APE++L + Y+ VD W+
Sbjct: 183 TLCGTPEYLAPEIILSKG-----YNKAVDWWA 209
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 10 IGTPYWMAPEVVLCETFRDNPYDFKVDIWS 39
+ T Y+ APEV+L +++N VDIWS
Sbjct: 186 VVTRYYRAPEVILGMGYKEN-----VDIWS 210
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 226 TPYYVAPEVLGPEK-----YDKSCDMWS 248
>pdb|3MW4|A Chain A, Crystal Structure Of Beta-Neurexin 3 Without The Splice
Insert 4
pdb|3MW4|B Chain B, Crystal Structure Of Beta-Neurexin 3 Without The Splice
Insert 4
pdb|3MW4|C Chain C, Crystal Structure Of Beta-Neurexin 3 Without The Splice
Insert 4
Length = 178
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 74 ISDGKYHTVEMLAIGKTFTLRVDH 97
++DGKYH V G TL+VD+
Sbjct: 88 VNDGKYHVVRFTRNGANATLQVDN 111
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 196 TPYYVAPEVLGPEK-----YDKSCDMWS 218
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 182 TPYYVAPEVLGPEK-----YDKSCDMWS 204
>pdb|3NVL|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Trypanosoma Brucei
pdb|3NVL|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Trypanosoma Brucei
Length = 571
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 17/97 (17%)
Query: 69 TSYEIISDGKYHTVEML-AIGKTFTLRVDHGNSRSITN-----------EGS----TEHL 112
TS E + E + ++ F + DHGNS + EG+ T H
Sbjct: 457 TSLEAVDQSLQRLKEAVDSVNGVFLITADHGNSDDMVQRDKKGKPVRDAEGNLMPLTSHT 516
Query: 113 RLHSPMYVGGVPLDPVGMEAFTHWHLRNLTSFNGTFL 149
P+++GG LDP ++ T L + TF+
Sbjct: 517 LAPVPVFIGGAGLDPR-VQMRTDLPRAGLANVTATFI 552
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 40 YKKEHILKMSWRDKAKFKELDRPVRLEASTSY-EIISDG 77
Y +E I K+S + K KE+ RP+ + A Y EI+ DG
Sbjct: 189 YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDG 227
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 188 TPYYVAPEVLGPEK-----YDKSCDMWS 210
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 192 TPYYVAPEVLGPEK-----YDKSCDMWS 214
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 186 TPYYVAPEVLGPEK-----YDKSCDMWS 208
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 187 TPYYVAPEVLGPEK-----YDKSCDMWS 209
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 180 TPYYVAPEVLGPEK-----YDKSCDMWS 202
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 180 TPYYVAPEVLGPEK-----YDKSCDMWS 202
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 181 TPYYVAPEVLGPEK-----YDKSCDMWS 203
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 173 TPYYVAPEVLGPEK-----YDKSCDMWS 195
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 12 TPYWMAPEVVLCETFRDNPYDFKVDIWS 39
TPY++APEV+ E YD D+WS
Sbjct: 182 TPYYVAPEVLGPEK-----YDKSCDMWS 204
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
Query: 15 WMAPEVVLCETFRDNPYDFKVDIWSY 40
WMAPE + + Y F+ D+WSY
Sbjct: 213 WMAPESIF-----NCVYTFESDVWSY 233
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
Query: 15 WMAPEVVLCETFRDNPYDFKVDIWSY 40
WMAPE + + Y F+ D+WSY
Sbjct: 229 WMAPESIF-----NCVYTFESDVWSY 249
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
Query: 15 WMAPEVVLCETFRDNPYDFKVDIWSY 40
WMAPE + + Y F+ D+WSY
Sbjct: 236 WMAPESIF-----NCVYTFESDVWSY 256
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
Query: 15 WMAPEVVLCETFRDNPYDFKVDIWSY 40
WMAPE + + Y F+ D+WSY
Sbjct: 231 WMAPESIF-----NCVYTFESDVWSY 251
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
Query: 15 WMAPEVVLCETFRDNPYDFKVDIWSY 40
WMAPE + + Y F+ D+WSY
Sbjct: 236 WMAPESIF-----NCVYTFESDVWSY 256
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,951,003
Number of Sequences: 62578
Number of extensions: 206218
Number of successful extensions: 820
Number of sequences better than 100.0: 231
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 687
Number of HSP's gapped (non-prelim): 242
length of query: 149
length of database: 14,973,337
effective HSP length: 90
effective length of query: 59
effective length of database: 9,341,317
effective search space: 551137703
effective search space used: 551137703
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)