Your job contains 1 sequence.
>psy15410
MTTIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKD
HHTAQFVSLVDIAGMDVPSRPNRFEVD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15410
(87 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035404 - symbol:CG12079 species:7227 "Drosophila ... 335 2.3e-30 1
WB|WBGene00020417 - symbol:nuo-2 species:6239 "Caenorhabd... 263 2.6e-22 1
ZFIN|ZDB-GENE-050417-274 - symbol:ndufs3 "NADH dehydrogen... 255 7.0e-22 1
UNIPROTKB|F1ND23 - symbol:NDUFS3 "Uncharacterized protein... 249 3.0e-21 1
UNIPROTKB|O75489 - symbol:NDUFS3 "NADH dehydrogenase [ubi... 246 6.3e-21 1
UNIPROTKB|Q0MQG6 - symbol:NDUFS3 "NADH dehydrogenase [ubi... 246 6.3e-21 1
UNIPROTKB|Q0MQG7 - symbol:NDUFS3 "NADH dehydrogenase [ubi... 246 6.3e-21 1
UNIPROTKB|Q0MQG8 - symbol:NDUFS3 "NADH dehydrogenase [ubi... 246 6.3e-21 1
RGD|1309406 - symbol:Ndufs3 "NADH dehydrogenase (ubiquino... 245 8.0e-21 1
UNIPROTKB|P23709 - symbol:NDUFS3 "NADH dehydrogenase [ubi... 243 1.3e-20 1
UNIPROTKB|F1P9Y3 - symbol:NDUFS3 "Uncharacterized protein... 242 1.7e-20 1
UNIPROTKB|F1SIF2 - symbol:NDUFS3 "Uncharacterized protein... 241 2.1e-20 1
UNIPROTKB|F1MS25 - symbol:NDUFS3 "NADH dehydrogenase [ubi... 240 2.7e-20 1
MGI|MGI:1915599 - symbol:Ndufs3 "NADH dehydrogenase (ubiq... 238 4.4e-20 1
CGD|CAL0000774 - symbol:ALI1 species:5476 "Candida albica... 142 1.7e-09 1
UNIPROTKB|Q5AJ83 - symbol:CaO19.1710 "Potential mitochond... 142 1.7e-09 1
ASPGD|ASPL0000043508 - symbol:AN10229 species:162425 "Eme... 142 1.9e-09 1
UNIPROTKB|Q0C1E5 - symbol:nuoC "NADH-quinone oxidoreducta... 116 5.0e-07 1
UNIPROTKB|Q35322 - symbol:NAD9 "NADH dehydrogenase [ubiqu... 95 0.00012 1
UNIPROTKB|Q7JAI4 - symbol:nad9 "NADH dehydrogenase subuni... 95 0.00012 1
TIGR_CMR|SPO_2784 - symbol:SPO_2784 "NADH-quinone oxidore... 91 0.00038 1
>FB|FBgn0035404 [details] [associations]
symbol:CG12079 species:7227 "Drosophila melanogaster"
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=ISS] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=ISS] [GO:0003954 "NADH dehydrogenase activity"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
HAMAP:MF_01357 InterPro:IPR001268 InterPro:IPR010218
InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542
GO:GO:0005739 EMBL:AE014296 GO:GO:0008137 eggNOG:COG0852 KO:K03936
TIGRFAMs:TIGR01961 OMA:QQVQVTC GeneTree:ENSGT00390000017480
EMBL:AY118532 EMBL:BT011342 RefSeq:NP_647775.1 UniGene:Dm.11274
SMR:Q9VZU4 IntAct:Q9VZU4 MINT:MINT-337312 STRING:Q9VZU4
EnsemblMetazoa:FBtr0073113 GeneID:38378 KEGG:dme:Dmel_CG12079
UCSC:CG12079-RA FlyBase:FBgn0035404 InParanoid:Q9VZU4
OrthoDB:EOG4STQMM GenomeRNAi:38378 NextBio:808324 Uniprot:Q9VZU4
Length = 265
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 64/84 (76%), Positives = 74/84 (88%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R+P D VARSHL DFG+Y AE LPKY++KVQ+T+GDELE+LI PEGVVPVLQFLKDHH
Sbjct: 48 TVRQP-DAVARSHLSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHH 106
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF +LVDIAG+DVP R NRFEV
Sbjct: 107 QAQFTNLVDIAGVDVPCRKNRFEV 130
>WB|WBGene00020417 [details] [associations]
symbol:nuo-2 species:6239 "Caenorhabditis elegans"
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016651
"oxidoreductase activity, acting on NAD(P)H" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
HAMAP:MF_01357 InterPro:IPR001268 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR010218 InterPro:IPR020396
Pfam:PF00329 Pfam:PF13014 ProDom:PD001581 PROSITE:PS00542
PROSITE:PS50084 SMART:SM00322 GO:GO:0005739 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0003723 GO:GO:0008137 HOGENOM:HOG000009797
eggNOG:COG0852 KO:K03936 TIGRFAMs:TIGR01961
GeneTree:ENSGT00390000017480 EMBL:FO080959 PIR:T25880
RefSeq:NP_491881.2 ProteinModelPortal:O01602 SMR:O01602
DIP:DIP-25489N MINT:MINT-1044589 STRING:O01602 PaxDb:O01602
PRIDE:O01602 EnsemblMetazoa:T10E9.7a GeneID:172363
KEGG:cel:CELE_T10E9.7 UCSC:T10E9.7b CTD:172363 WormBase:T10E9.7a
InParanoid:O01602 OMA:KDIGFLI NextBio:875207 ArrayExpress:O01602
Uniprot:O01602
Length = 445
Score = 263 (97.6 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 54/84 (64%), Positives = 63/84 (75%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
TI K IDE R L +FGKY AE LPK+++KVQ +GDELELLI P GVVPVL FLK +H
Sbjct: 220 TIWK-IDEHKRERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVVPVLSFLKGNH 278
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
+AQF +L I GMDVP+R NR EV
Sbjct: 279 SAQFTNLTFITGMDVPTRKNRLEV 302
>ZFIN|ZDB-GENE-050417-274 [details] [associations]
symbol:ndufs3 "NADH dehydrogenase (ubiquinone) Fe-S
protein 3, (NADH-coenzyme Q reductase)" species:7955 "Danio rerio"
[GO:0016651 "oxidoreductase activity, acting on NAD(P)H"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] HAMAP:MF_01357 InterPro:IPR001268 InterPro:IPR010218
InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542
ZFIN:ZDB-GENE-050417-274 GO:GO:0008137 HOGENOM:HOG000009797
eggNOG:COG0852 CTD:4722 HOVERGEN:HBG000450 KO:K03936
OrthoDB:EOG4VMFGB TIGRFAMs:TIGR01961 EMBL:BC093359 IPI:IPI00503659
RefSeq:NP_001017755.1 UniGene:Dr.75620 ProteinModelPortal:Q566S4
STRING:Q566S4 GeneID:550451 KEGG:dre:550451 InParanoid:Q566S4
NextBio:20879696 Uniprot:Q566S4
Length = 255
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 46/84 (54%), Positives = 65/84 (77%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P D V S L +FG+Y AEILPKY+++VQ+T +ELE+++ PEG++PVL FLKDH
Sbjct: 39 TVR-PKDPVTHSQLSEFGEYVAEILPKYVQQVQVTCFNELEIMVHPEGIIPVLTFLKDHT 97
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF +L D+ +D+PS+ NRFE+
Sbjct: 98 NAQFRNLADLTAVDIPSKQNRFEI 121
>UNIPROTKB|F1ND23 [details] [associations]
symbol:NDUFS3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0005747 "mitochondrial respiratory
chain complex I" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0072593 "reactive oxygen species metabolic
process" evidence=IEA] HAMAP:MF_01357 InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 GO:GO:0006917 GO:GO:0030308 GO:GO:0005747
GO:GO:0008137 GO:GO:0072593 TIGRFAMs:TIGR01961 OMA:QQVQVTC
GeneTree:ENSGT00390000017480 EMBL:AADN02033460 EMBL:AADN02033461
EMBL:AADN02033462 IPI:IPI00572839 Ensembl:ENSGALT00000013121
Uniprot:F1ND23
Length = 237
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 49/84 (58%), Positives = 64/84 (76%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P +EV + L FG+Y AEILPKYI++VQ+T +ELELLI P+G++PVL FL+DH
Sbjct: 19 TVR-PKNEVEQKQLCAFGEYVAEILPKYIQQVQVTCFNELELLIHPDGIIPVLTFLRDHT 77
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SL D+ +DVPSR RFE+
Sbjct: 78 NAQFKSLADLTAVDVPSRQYRFEI 101
>UNIPROTKB|O75489 [details] [associations]
symbol:NDUFS3 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 3, mitochondrial" species:9606 "Homo sapiens" [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=NAS] [GO:0009055 "electron carrier activity" evidence=NAS]
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=NAS] [GO:0031966 "mitochondrial membrane" evidence=IDA]
[GO:0003954 "NADH dehydrogenase activity" evidence=IMP] [GO:0006917
"induction of apoptosis" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0072593 "reactive
oxygen species metabolic process" evidence=IMP] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005747 "mitochondrial
respiratory chain complex I" evidence=IDA;NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005743 "mitochondrial inner membrane"
evidence=TAS] [GO:0022904 "respiratory electron transport chain"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 EMBL:CH471064 GO:GO:0006917 GO:GO:0030308
DrugBank:DB00157 GO:GO:0044281 GO:GO:0009055 Orphanet:2609
GO:GO:0005747 GO:GO:0008137 GO:GO:0006120 GO:GO:0072593
Orphanet:255241 HOGENOM:HOG000009797 eggNOG:COG0852 CTD:4722
HOVERGEN:HBG000450 KO:K03936 OrthoDB:EOG4VMFGB TIGRFAMs:TIGR01961
EMBL:AF067139 EMBL:AF200954 EMBL:AF100743 EMBL:AK313802
EMBL:BC000617 IPI:IPI00025796 PIR:JE0195 RefSeq:NP_004542.1
UniGene:Hs.502528 ProteinModelPortal:O75489 SMR:O75489
IntAct:O75489 STRING:O75489 PhosphoSite:O75489
REPRODUCTION-2DPAGE:IPI00025796 REPRODUCTION-2DPAGE:O75489
PaxDb:O75489 PeptideAtlas:O75489 PRIDE:O75489 DNASU:4722
Ensembl:ENST00000263774 GeneID:4722 KEGG:hsa:4722 UCSC:uc001nft.3
GeneCards:GC11P047587 HGNC:HGNC:7710 HPA:HPA004484 MIM:603846
neXtProt:NX_O75489 PharmGKB:PA31520 InParanoid:O75489 OMA:QQVQVTC
PhylomeDB:O75489 ChiTaRS:NDUFS3 GenomeRNAi:4722 NextBio:18210
ArrayExpress:O75489 Bgee:O75489 CleanEx:HS_NDUFS3
Genevestigator:O75489 GermOnline:ENSG00000110536 Uniprot:O75489
Length = 264
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 47/84 (55%), Positives = 65/84 (77%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P ++VA L FG+Y AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH
Sbjct: 46 TVR-PRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHT 104
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SLVD+ +DVP+R NRFE+
Sbjct: 105 NAQFKSLVDLTAVDVPTRQNRFEI 128
>UNIPROTKB|Q0MQG6 [details] [associations]
symbol:NDUFS3 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 3, mitochondrial" species:9600 "Pongo pygmaeus" [GO:0003954
"NADH dehydrogenase activity" evidence=ISS] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=ISS]
[GO:0006917 "induction of apoptosis" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=ISS] [GO:0072593 "reactive oxygen
species metabolic process" evidence=ISS] InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 GO:GO:0006917 GO:GO:0030308 GO:GO:0022900
GO:GO:0005747 GO:GO:0008137 GO:GO:0072593 GO:GO:0003954
HOGENOM:HOG000009797 eggNOG:COG0852 HOVERGEN:HBG000450
TIGRFAMs:TIGR01961 EMBL:DQ885668 ProteinModelPortal:Q0MQG6
STRING:Q0MQG6 InParanoid:Q0MQG6 Uniprot:Q0MQG6
Length = 263
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 47/84 (55%), Positives = 65/84 (77%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P ++VA L FG+Y AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH
Sbjct: 45 TVR-PRNDVAHQQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHT 103
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SLVD+ +DVP+R NRFE+
Sbjct: 104 NAQFKSLVDLTAVDVPTRQNRFEI 127
>UNIPROTKB|Q0MQG7 [details] [associations]
symbol:NDUFS3 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 3, mitochondrial" species:9595 "Gorilla gorilla gorilla"
[GO:0003954 "NADH dehydrogenase activity" evidence=ISS] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=ISS]
[GO:0006917 "induction of apoptosis" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=ISS] [GO:0072593 "reactive oxygen
species metabolic process" evidence=ISS] InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 GO:GO:0006917 GO:GO:0030308 GO:GO:0022900
GO:GO:0005747 GO:GO:0008137 GO:GO:0072593 GO:GO:0003954
HOVERGEN:HBG000450 TIGRFAMs:TIGR01961 EMBL:DQ885667
ProteinModelPortal:Q0MQG7 PRIDE:Q0MQG7 Uniprot:Q0MQG7
Length = 263
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 47/84 (55%), Positives = 65/84 (77%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P ++VA L FG+Y AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH
Sbjct: 45 TVR-PRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHT 103
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SLVD+ +DVP+R NRFE+
Sbjct: 104 NAQFKSLVDLTAVDVPTRQNRFEI 127
>UNIPROTKB|Q0MQG8 [details] [associations]
symbol:NDUFS3 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 3, mitochondrial" species:9598 "Pan troglodytes"
[GO:0003954 "NADH dehydrogenase activity" evidence=ISS] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=ISS]
[GO:0006917 "induction of apoptosis" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=ISS] [GO:0072593 "reactive oxygen
species metabolic process" evidence=ISS] InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 GO:GO:0006917 GO:GO:0030308 GO:GO:0022900
GO:GO:0005747 GO:GO:0008137 GO:GO:0072593 GO:GO:0003954
HOGENOM:HOG000009797 eggNOG:COG0852 CTD:4722 HOVERGEN:HBG000450
KO:K03936 OrthoDB:EOG4VMFGB TIGRFAMs:TIGR01961 EMBL:DQ885666
RefSeq:NP_001073382.1 UniGene:Ptr.3897 ProteinModelPortal:Q0MQG8
STRING:Q0MQG8 PRIDE:Q0MQG8 GeneID:451175 KEGG:ptr:451175
InParanoid:Q0MQG8 NextBio:20833804 Uniprot:Q0MQG8
Length = 264
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 47/84 (55%), Positives = 65/84 (77%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P ++VA L FG+Y AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH
Sbjct: 46 TVR-PRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHT 104
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SLVD+ +DVP+R NRFE+
Sbjct: 105 NAQFKSLVDLTAVDVPTRQNRFEI 128
>RGD|1309406 [details] [associations]
symbol:Ndufs3 "NADH dehydrogenase (ubiquinone) Fe-S protein 3"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003954 "NADH dehydrogenase activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IEA;ISO]
[GO:0006917 "induction of apoptosis" evidence=IEA;ISO] [GO:0008137
"NADH dehydrogenase (ubiquinone) activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030308 "negative
regulation of cell growth" evidence=IEA;ISO] [GO:0031966
"mitochondrial membrane" evidence=ISO] [GO:0072593 "reactive oxygen
species metabolic process" evidence=IEA;ISO] HAMAP:MF_01357
InterPro:IPR001268 InterPro:IPR010218 InterPro:IPR020396
Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542 RGD:1309406
GO:GO:0006917 GO:GO:0030308 GO:GO:0005747 GO:GO:0008137
GO:GO:0072593 EMBL:CH473949 CTD:4722 KO:K03936 OrthoDB:EOG4VMFGB
TIGRFAMs:TIGR01961 OMA:QQVQVTC GeneTree:ENSGT00390000017480
IPI:IPI00202616 RefSeq:NP_001099959.1 UniGene:Rn.1261
Ensembl:ENSRNOT00000012425 GeneID:295923 KEGG:rno:295923
UCSC:RGD:1309406 NextBio:640329 Uniprot:D3ZG43
Length = 264
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 46/84 (54%), Positives = 61/84 (72%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P +V L FG+Y AEILPKY+++VQ+T DELE+ I P+GV+P + FLKDH
Sbjct: 46 TVR-PSSDVTHKRLSAFGEYVAEILPKYVQQVQVTCFDELEICIHPDGVIPTITFLKDHT 104
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SL D+ +DVP+R NRFE+
Sbjct: 105 NAQFKSLADLTAVDVPTRQNRFEI 128
>UNIPROTKB|P23709 [details] [associations]
symbol:NDUFS3 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 3, mitochondrial" species:9913 "Bos taurus" [GO:0031966
"mitochondrial membrane" evidence=ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISS] [GO:0006917 "induction of
apoptosis" evidence=ISS] [GO:0072593 "reactive oxygen species
metabolic process" evidence=ISS] [GO:0005747 "mitochondrial
respiratory chain complex I" evidence=ISS] [GO:0003954 "NADH
dehydrogenase activity" evidence=ISS] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 EMBL:M58469 GO:GO:0006917 GO:GO:0030308
GO:GO:0022900 TCDB:3.D.1.6.1 GO:GO:0005747 GO:GO:0008137
GO:GO:0072593 GO:GO:0003954 HOGENOM:HOG000009797 eggNOG:COG0852
IPI:IPI00686077 PIR:A37957 RefSeq:NP_777244.1 UniGene:Bt.1153
ProteinModelPortal:P23709 IntAct:P23709 STRING:P23709 PRIDE:P23709
GeneID:287327 KEGG:bta:287327 CTD:4722 HOVERGEN:HBG000450
InParanoid:P23709 KO:K03936 OrthoDB:EOG4VMFGB NextBio:20806550
TIGRFAMs:TIGR01961 Uniprot:P23709
Length = 266
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 45/84 (53%), Positives = 64/84 (76%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P ++VA L FG+Y AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH
Sbjct: 48 TVR-PRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHS 106
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SL D+ +D+P+R NRFE+
Sbjct: 107 NAQFKSLADLTAVDIPTRQNRFEI 130
>UNIPROTKB|F1P9Y3 [details] [associations]
symbol:NDUFS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072593 "reactive oxygen species metabolic
process" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=IEA] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] HAMAP:MF_01357 InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 GO:GO:0006917 GO:GO:0030308 GO:GO:0005747
GO:GO:0008137 GO:GO:0072593 TIGRFAMs:TIGR01961 OMA:QQVQVTC
GeneTree:ENSGT00390000017480 EMBL:AAEX03011483
Ensembl:ENSCAFT00000013355 Uniprot:F1P9Y3
Length = 266
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 45/84 (53%), Positives = 64/84 (76%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P ++VA L FG+Y AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH
Sbjct: 48 TVR-PRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHT 106
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SL D+ +D+P+R NRFE+
Sbjct: 107 NAQFKSLADLTAVDIPTRQNRFEI 130
>UNIPROTKB|F1SIF2 [details] [associations]
symbol:NDUFS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072593 "reactive oxygen species metabolic process"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=IEA] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] HAMAP:MF_01357 InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 GO:GO:0006917 GO:GO:0030308 GO:GO:0005747
GO:GO:0008137 GO:GO:0072593 TIGRFAMs:TIGR01961 OMA:QQVQVTC
GeneTree:ENSGT00390000017480 EMBL:CU856103
Ensembl:ENSSSCT00000014449 Uniprot:F1SIF2
Length = 264
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 46/84 (54%), Positives = 63/84 (75%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
TIR P ++V L FG+Y AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH
Sbjct: 46 TIR-PRNDVVHKQLSAFGQYVAEILPKYVQQVQVSCFNELEIFIHPDGVIPVLTFLRDHT 104
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SL D+ +DVP+R NRFE+
Sbjct: 105 NAQFKSLADLTAVDVPTRQNRFEI 128
>UNIPROTKB|F1MS25 [details] [associations]
symbol:NDUFS3 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 3, mitochondrial" species:9913 "Bos taurus" [GO:0072593
"reactive oxygen species metabolic process" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IEA]
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] HAMAP:MF_01357 InterPro:IPR001268 InterPro:IPR010218
InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542
GO:GO:0006917 GO:GO:0030308 GO:GO:0005747 GO:GO:0008137
GO:GO:0072593 IPI:IPI00686077 TIGRFAMs:TIGR01961 OMA:QQVQVTC
GeneTree:ENSGT00390000017480 EMBL:DAAA02041605
Ensembl:ENSBTAT00000024600 Uniprot:F1MS25
Length = 242
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 45/84 (53%), Positives = 63/84 (75%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P + VA L FG+Y AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH
Sbjct: 24 TVR-PRNAVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHS 82
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SL D+ +D+P+R NRFE+
Sbjct: 83 NAQFKSLADLTAVDIPTRQNRFEI 106
>MGI|MGI:1915599 [details] [associations]
symbol:Ndufs3 "NADH dehydrogenase (ubiquinone) Fe-S protein
3" species:10090 "Mus musculus" [GO:0003954 "NADH dehydrogenase
activity" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=ISO] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016651 "oxidoreductase activity, acting on
NAD(P)H" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0031966 "mitochondrial membrane" evidence=ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO] [GO:0070469
"respiratory chain" evidence=IEA] [GO:0072593 "reactive oxygen
species metabolic process" evidence=ISO] InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 MGI:MGI:1915599 GO:GO:0006917 GO:GO:0030308
GO:GO:0022900 GO:GO:0005747 GO:GO:0008137 GO:GO:0072593
GO:GO:0003954 EMBL:AL672241 HOGENOM:HOG000009797 eggNOG:COG0852
CTD:4722 HOVERGEN:HBG000450 KO:K03936 OrthoDB:EOG4VMFGB
TIGRFAMs:TIGR01961 OMA:QQVQVTC EMBL:AK002501 EMBL:AK088337
EMBL:BC027270 EMBL:BC119267 EMBL:BC119269 IPI:IPI00121309
RefSeq:NP_080964.1 UniGene:Mm.30113 ProteinModelPortal:Q9DCT2
SMR:Q9DCT2 DIP:DIP-32378N IntAct:Q9DCT2 STRING:Q9DCT2
PhosphoSite:Q9DCT2 World-2DPAGE:0004:Q9DCT2 PaxDb:Q9DCT2
PRIDE:Q9DCT2 Ensembl:ENSMUST00000005647 GeneID:68349 KEGG:mmu:68349
UCSC:uc008ktr.1 GeneTree:ENSGT00390000017480 InParanoid:Q9DCT2
NextBio:327045 Bgee:Q9DCT2 CleanEx:MM_NDUFS3 Genevestigator:Q9DCT2
GermOnline:ENSMUSG00000005510 Uniprot:Q9DCT2
Length = 263
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 45/84 (53%), Positives = 61/84 (72%)
Query: 3 TIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHH 62
T+R P +V L FG+Y AEILPKY+++VQ++ DELE+ I P+GV+P L FL+DH
Sbjct: 45 TVR-PRSDVTHKQLSAFGEYVAEILPKYVQQVQVSCLDELEICIHPDGVIPTLTFLRDHT 103
Query: 63 TAQFVSLVDIAGMDVPSRPNRFEV 86
AQF SL D+ +DVP+R NRFE+
Sbjct: 104 NAQFKSLADLTAVDVPTRQNRFEI 127
>CGD|CAL0000774 [details] [associations]
symbol:ALI1 species:5476 "Candida albicans" [GO:0016020
"membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] HAMAP:MF_01357 InterPro:IPR001268 InterPro:IPR010218
InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542
CGD:CAL0000774 GO:GO:0005886 GO:GO:0008137 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG0852 KO:K03936 TIGRFAMs:TIGR01961
RefSeq:XP_721660.1 RefSeq:XP_721781.1 ProteinModelPortal:Q5AJ83
STRING:Q5AJ83 GeneID:3636635 GeneID:3636744 KEGG:cal:CaO19.1710
KEGG:cal:CaO19.9277 Uniprot:Q5AJ83
Length = 279
Score = 142 (55.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 10 EVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVSL 69
+V L FG Y LPKY+ + + DEL + + P ++P + FLK++ QF +
Sbjct: 61 KVQIEELHKFGTYIMACLPKYVHQFSVWK-DELTIYVAPSAILPTMLFLKNNTACQFKQV 119
Query: 70 VDIAGMDVPSRPNRFEV 86
D+ D PSR NRF+V
Sbjct: 120 SDVTAADYPSRTNRFDV 136
>UNIPROTKB|Q5AJ83 [details] [associations]
symbol:CaO19.1710 "Potential mitochondrial Complex I,
NUGM_30kd subunit" species:237561 "Candida albicans SC5314"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] HAMAP:MF_01357 InterPro:IPR001268 InterPro:IPR010218
InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542
CGD:CAL0000774 GO:GO:0005886 GO:GO:0008137 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG0852 KO:K03936 TIGRFAMs:TIGR01961
RefSeq:XP_721660.1 RefSeq:XP_721781.1 ProteinModelPortal:Q5AJ83
STRING:Q5AJ83 GeneID:3636635 GeneID:3636744 KEGG:cal:CaO19.1710
KEGG:cal:CaO19.9277 Uniprot:Q5AJ83
Length = 279
Score = 142 (55.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 10 EVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVSL 69
+V L FG Y LPKY+ + + DEL + + P ++P + FLK++ QF +
Sbjct: 61 KVQIEELHKFGTYIMACLPKYVHQFSVWK-DELTIYVAPSAILPTMLFLKNNTACQFKQV 119
Query: 70 VDIAGMDVPSRPNRFEV 86
D+ D PSR NRF+V
Sbjct: 120 SDVTAADYPSRTNRFDV 136
>ASPGD|ASPL0000043508 [details] [associations]
symbol:AN10229 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008137
"NADH dehydrogenase (ubiquinone) activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] HAMAP:MF_01357
InterPro:IPR001268 InterPro:IPR010218 InterPro:IPR020396
Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542 EMBL:BN001307
GO:GO:0008137 HOGENOM:HOG000009797 TIGRFAMs:TIGR01961
EnsemblFungi:CADANIAT00008372 OMA:MTDYGFD Uniprot:C8VP28
Length = 290
Score = 142 (55.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 26/71 (36%), Positives = 44/71 (61%)
Query: 16 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVSLVDIAGM 75
L +G+Y LPK++++ + DEL + + P G++P FLK H +A+F ++ DI +
Sbjct: 79 LHQYGQYIMACLPKHVQQFSVWK-DELCIYVPPSGIIPTFTFLKYHTSAEFTTVSDITAV 137
Query: 76 DVPSRPNRFEV 86
D P++ RFEV
Sbjct: 138 DYPTKDQRFEV 148
>UNIPROTKB|Q0C1E5 [details] [associations]
symbol:nuoC "NADH-quinone oxidoreductase subunit C"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0050136 "NADH
dehydrogenase (quinone) activity" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] HAMAP:MF_01357
InterPro:IPR001268 InterPro:IPR010218 InterPro:IPR020396
Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542 GO:GO:0005886
GO:GO:0006810 GO:GO:0048038 GO:GO:0008137 EMBL:CP000158
GenomeReviews:CP000158_GR HOGENOM:HOG000009797 eggNOG:COG0852
TIGRFAMs:TIGR01961 GO:GO:0050136 KO:K00332 RefSeq:YP_760448.1
ProteinModelPortal:Q0C1E5 STRING:Q0C1E5 GeneID:4288025
KEGG:hne:HNE_1744 PATRIC:32216315 OMA:ICGVDYP ProtClustDB:PRK06074
BioCyc:HNEP228405:GI69-1772-MONOMER Uniprot:Q0C1E5
Length = 202
Score = 116 (45.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 16 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVSLVDIAGM 75
L D + +P + QI G EL LL + +VP+L+FL+D F + +D+ G+
Sbjct: 6 LSDLAAHIEGRMPDAVRSWQIHVG-ELTLLAERDHIVPLLRFLRDDQQCNFETFIDVCGV 64
Query: 76 DVPSRPNRFEV 86
D P R RFEV
Sbjct: 65 DYPERSERFEV 75
>UNIPROTKB|Q35322 [details] [associations]
symbol:NAD9 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 3" species:39947 "Oryza sativa Japonica Group" [GO:0005739
"mitochondrion" evidence=IC;ISS] InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581
PROSITE:PS00542 GO:GO:0005739 GO:GO:0005743 GO:GO:0008270
GO:GO:0022900 GO:GO:0050897 GO:GO:0008137 GO:GO:0045271
HOGENOM:HOG000009797 eggNOG:COG0852 TIGRFAMs:TIGR01961 EMBL:D50099
PIR:T03231 ProteinModelPortal:Q35322 STRING:Q35322 Gramene:Q35322
Uniprot:Q35322
Length = 190
Score = 95 (38.5 bits), Expect = 0.00012, P = 0.00012
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 21 KYCAEILPK-YIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVSLVDIAGMDVPS 79
+Y EILPK ++ K++ + + + P+L FLK H + L+DI G+D PS
Sbjct: 8 QYSWEILPKKWVHKMKRSEHGN-RFYTNTDYLFPLLCFLKWHTYTRVQVLIDICGVDYPS 66
Query: 80 RPNRFEV 86
R RFEV
Sbjct: 67 RKRRFEV 73
>UNIPROTKB|Q7JAI4 [details] [associations]
symbol:nad9 "NADH dehydrogenase subunit 9" species:39947
"Oryza sativa Japonica Group" [GO:0005739 "mitochondrion"
evidence=IC] HAMAP:MF_01357 InterPro:IPR001268 InterPro:IPR010218
InterPro:IPR020396 Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542
GO:GO:0005739 GO:GO:0008270 GO:GO:0050897 GO:GO:0008137
EMBL:BA000029 GenomeReviews:BA000029_GR GO:GO:0045271 KO:K03936
TIGRFAMs:TIGR01961 RefSeq:YP_002000595.1 STRING:Q7JAI4 PRIDE:Q7JAI4
GeneID:6450154 KEGG:osa:6450154 Gramene:Q7JAI4 Uniprot:Q7JAI4
Length = 190
Score = 95 (38.5 bits), Expect = 0.00012, P = 0.00012
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 21 KYCAEILPK-YIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVSLVDIAGMDVPS 79
+Y EILPK ++ K++ + + + P+L FLK H + L+DI G+D PS
Sbjct: 8 QYSWEILPKKWVHKMKRSEHGN-RFYTNTDYLFPLLCFLKWHTYTRVQVLIDICGVDYPS 66
Query: 80 RPNRFEV 86
R RFEV
Sbjct: 67 RKRRFEV 73
>TIGR_CMR|SPO_2784 [details] [associations]
symbol:SPO_2784 "NADH-quinone oxidoreductase, C subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0050136 "NADH
dehydrogenase (quinone) activity" evidence=ISS] HAMAP:MF_01357
InterPro:IPR001268 InterPro:IPR010218 InterPro:IPR020396
Pfam:PF00329 ProDom:PD001581 PROSITE:PS00542 GO:GO:0005886
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006810 GO:GO:0048038
GO:GO:0008137 HOGENOM:HOG000009797 eggNOG:COG0852
TIGRFAMs:TIGR01961 KO:K00332 OMA:ICGVDYP ProtClustDB:PRK06074
RefSeq:YP_167991.1 ProteinModelPortal:Q5LPR5 GeneID:3193202
KEGG:sil:SPO2784 PATRIC:23378989 Uniprot:Q5LPR5
Length = 200
Score = 91 (37.1 bits), Expect = 0.00038, P = 0.00038
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 36 ITSGDELELLIIPEGVVPVLQFLKDHHTAQFVSLVDIAGMDVPSRPNRFEV 86
+T G EL + + P +V + FL+ + +F +LVDI +D P R RF+V
Sbjct: 25 VTFG-ELNVDVAPSNLVDFVDFLRSDSSCRFSTLVDITAVDYPERAKRFDV 74
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.141 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 87 87 0.00091 102 3 11 22 0.44 29
29 0.48 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 497 (53 KB)
Total size of DFA: 93 KB (2068 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.55u 0.11s 10.66t Elapsed: 00:00:00
Total cpu time: 10.55u 0.11s 10.66t Elapsed: 00:00:00
Start: Thu Aug 15 16:32:44 2013 End: Thu Aug 15 16:32:44 2013