BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy15414
         (1458 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|157117728|ref|XP_001658908.1| arginyl-tRNA synthetase [Aedes aegypti]
 gi|108884575|gb|EAT48800.1| AAEL000199-PA [Aedes aegypti]
          Length = 671

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/628 (60%), Positives = 477/628 (75%), Gaps = 23/628 (3%)

Query: 441  QAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKT 500
            +AIA E   QG +S S S +         P    +S+ D+LS++FT A+  AFP++    
Sbjct: 61   KAIAAE---QGHASDSGSPS--------TPNGGAVSILDHLSNLFTQAIATAFPQVCQDV 109

Query: 501  ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 560
             +V + +     KFGD+QCN+AM + +  K    K NP D+A  +        A  PS A
Sbjct: 110  PAVITVSSSA--KFGDYQCNNAMQIVQKLKALDVKTNPRDVANKLME------ALPPSPA 161

Query: 561  KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
              I K+EVA  GFVNVFL + +    I  I+ +GV+PP   K+ RV+VDFSSPNIAKEMH
Sbjct: 162  --ISKVEVAGAGFVNVFLDKAFGASAIMSILKDGVKPPQFEKR-RVIVDFSSPNIAKEMH 218

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
            VGHLRSTIIGD+ISR LE+LGHDV+RLNHVGDWGTQFGMLIAHLQD+FPDYL  SPPI+D
Sbjct: 219  VGHLRSTIIGDSISRFLEFLGHDVLRLNHVGDWGTQFGMLIAHLQDRFPDYLKVSPPISD 278

Query: 681  LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 740
            LQ FYKESK RFD DE FKKRAY CVV LQ  D D  KAW++ICDVSR++FQK+YDRLNV
Sbjct: 279  LQGFYKESKSRFDSDEDFKKRAYACVVKLQSGDDDSMKAWKLICDVSRKEFQKVYDRLNV 338

Query: 741  TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTS 800
             L ERGESFYQK ME +V  L   G LE D+GRKIMWGE+R  IP+TI+KSDGGFTYDTS
Sbjct: 339  KLIERGESFYQKRMEAIVKELANAGFLEEDEGRKIMWGENRNGIPLTIIKSDGGFTYDTS 398

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+AAI+QR+ EEK +W+VYVTD GQ  HF+ +  CA++A +L+PN  R+D VGFGVVLGE
Sbjct: 399  DMAAIKQRLHEEKGEWLVYVTDAGQATHFQTIFSCARRANVLDPNVHRVDHVGFGVVLGE 458

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D KKFKTRSGDTVKL+ELLDEGL+RSLDKL +K R   LTP EL +AQ++VAYGCIKYAD
Sbjct: 459  DGKKFKTRSGDTVKLTELLDEGLKRSLDKLLEKERDKVLTPEELKQAQESVAYGCIKYAD 518

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGIN-SEDLRVAAQSTPVSL 979
            LSHNRN +Y+FSFDKML+D+GNTAVYLLYAYTRI SIAR  G + + ++     +T ++L
Sbjct: 519  LSHNRNNEYIFSFDKMLEDKGNTAVYLLYAYTRIRSIARNCGGDFANNIEKVIDTTELTL 578

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
            +HEKE+ LAK LL+  DV+ L++++LCLHHLCE++Y++ST F+EFYD+CYCIEK+ +G+I
Sbjct: 579  DHEKEWKLAKVLLKFTDVMKLISKNLCLHHLCEFVYEVSTTFTEFYDSCYCIEKNKQGEI 638

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIR 1067
              ++ GR+LL EAT++++ KCFDIL ++
Sbjct: 639  VKINAGRVLLCEATSRILGKCFDILGLK 666



 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/397 (59%), Positives = 286/397 (72%), Gaps = 22/397 (5%)

Query: 36  QLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVF 95
           Q++N KLKHRL IL +AIA E+     S S S+   GA           +S+ D+LS++F
Sbjct: 46  QVENMKLKHRLVILNKAIAAEQGHASDSGSPSTPNGGA-----------VSILDHLSNLF 94

Query: 96  THAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI 155
           T A+  AFP++     +V + +     KFGD+QCN+AM + +  K    K NP D+A  +
Sbjct: 95  TQAIATAFPQVCQDVPAVITVSSSA--KFGDYQCNNAMQIVQKLKALDVKTNPRDVANKL 152

Query: 156 ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR 215
                   A  PS A  I K+EVA  GFVNVFL + +    I  I+ +GV+PP   K+ R
Sbjct: 153 ME------ALPPSPA--ISKVEVAGAGFVNVFLDKAFGASAIMSILKDGVKPPQFEKR-R 203

Query: 216 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 275
           V+VDFSSPNIAKEMHVGHLRSTIIGD+ISR LE+LGHDV+RLNHVGDWGTQFGMLIAHLQ
Sbjct: 204 VIVDFSSPNIAKEMHVGHLRSTIIGDSISRFLEFLGHDVLRLNHVGDWGTQFGMLIAHLQ 263

Query: 276 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 335
           D+FPDYL  SPPI+DLQ FYKESK RFD DE FKKRAY CVV LQ  D D  KAW++ICD
Sbjct: 264 DRFPDYLKVSPPISDLQGFYKESKSRFDSDEDFKKRAYACVVKLQSGDDDSMKAWKLICD 323

Query: 336 VSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIP 395
           VSR++FQK+YDRLNV L ERGESFYQK ME +V  L   G LE D+GRKIMWGE+R  IP
Sbjct: 324 VSRKEFQKVYDRLNVKLIERGESFYQKRMEAIVKELANAGFLEEDEGRKIMWGENRNGIP 383

Query: 396 MTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +TI+KSDGGFTYDTSD+AAI+QR+ EEK +W+VYVTD
Sbjct: 384 LTIIKSDGGFTYDTSDMAAIKQRLHEEKGEWLVYVTD 420



 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/387 (59%), Positives = 276/387 (71%), Gaps = 24/387 (6%)

Query: 1063 ILNIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPE 1122
            ILN   AIA E+     S S S+   GA           +S+ D+LS++FT A+  AFP+
Sbjct: 58   ILN--KAIAAEQGHASDSGSPSTPNGGA-----------VSILDHLSNLFTQAIATAFPQ 104

Query: 1123 LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELAT 1182
            +     +V + +     KFGD+QCN+AM + +  K    K NP D+A  +        A 
Sbjct: 105  VCQDVPAVITVSSSA--KFGDYQCNNAMQIVQKLKALDVKTNPRDVANKLME------AL 156

Query: 1183 NPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNI 1242
             PS A  I K+EVA  GFVNVFL + +    I  I+ +GV+PP   K+ RV+VDFSSPNI
Sbjct: 157  PPSPA--ISKVEVAGAGFVNVFLDKAFGASAIMSILKDGVKPPQFEKR-RVIVDFSSPNI 213

Query: 1243 AKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS 1302
            AKEMHVGHLRSTIIGD+ISR LE+LGHDV+RLNHVGDWGTQFGMLIAHLQD+FPDYL  S
Sbjct: 214  AKEMHVGHLRSTIIGDSISRFLEFLGHDVLRLNHVGDWGTQFGMLIAHLQDRFPDYLKVS 273

Query: 1303 PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIY 1362
            PPI+DLQ FYKESK RFD DE FKKRAY CVV LQ  D D  KAW++ICDVSR++FQK+Y
Sbjct: 274  PPISDLQGFYKESKSRFDSDEDFKKRAYACVVKLQSGDDDSMKAWKLICDVSRKEFQKVY 333

Query: 1363 DRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 1422
            DRLNV L ERGESFYQK ME +V  L   G LE D+GRKIMWGE+R  IP+TI+KSDGGF
Sbjct: 334  DRLNVKLIERGESFYQKRMEAIVKELANAGFLEEDEGRKIMWGENRNGIPLTIIKSDGGF 393

Query: 1423 TYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            TYDTSD+AAI+QR+ EEK +W+VYVTD
Sbjct: 394  TYDTSDMAAIKQRLHEEKGEWLVYVTD 420


>gi|350420346|ref|XP_003492480.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Bombus
            impatiens]
          Length = 674

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/606 (61%), Positives = 469/606 (77%), Gaps = 12/606 (1%)

Query: 464  AKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAM 523
              K+ +   + +S+ D LS++F  A+ VA+P++ D    + S+N     KFGD+QCN AM
Sbjct: 78   GNKLKMTENNVISIYDTLSNLFKEAISVAYPDVCDPPVIITSSNNP---KFGDYQCNSAM 134

Query: 524  ALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYA 583
             L K   +   +  P D+A++I S V          + +I K+EV   GF+N++L R +A
Sbjct: 135  PLSKQLNNNEIRTKPQDVAKNIMSKVEE--------SSLISKLEVNGAGFINIYLKREFA 186

Query: 584  GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 643
               +  ++ NG   P   KK +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+RLLE+LGHD
Sbjct: 187  QSTLNTLVKNGEAFPPYTKKQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARLLEFLGHD 246

Query: 644  VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 703
            V+R+NH+GDWGTQFGMLIAHLQDKFPDYL+ SPPI DLQ+FYKESK RFD DE FKKRAY
Sbjct: 247  VLRINHIGDWGTQFGMLIAHLQDKFPDYLSISPPITDLQSFYKESKTRFDGDEEFKKRAY 306

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 763
             CVV LQ FD D  KAW++ICDVSR++F+KIY RL++ L ERGESFYQKHME +V  LE 
Sbjct: 307  NCVVKLQAFDSDMIKAWQLICDVSRKEFEKIYTRLDIKLIERGESFYQKHMEAIVKDLEA 366

Query: 764  KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
            KGLLE D+GRK+MW ++   IP+TIVKSDGGFTYDTSD+AAI+QRIEEEKADW++YVTD 
Sbjct: 367  KGLLEEDEGRKVMWSKENNEIPLTIVKSDGGFTYDTSDMAAIKQRIEEEKADWVIYVTDA 426

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ +HF++L+ CAK+A I+  ++ R+D VGFGVVLG D+KKFKTRSGDTVKLS+LLDEGL
Sbjct: 427  GQSMHFQVLKNCAKRASII-ESRHRIDHVGFGVVLGNDKKKFKTRSGDTVKLSDLLDEGL 485

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
            +R+L+KL +K R   LT  EL  AQ+++AYGCIKYADLSHNRN +YVFSFDKML+D+GNT
Sbjct: 486  KRALEKLIEKERDKVLTEEELKIAQESIAYGCIKYADLSHNRNHEYVFSFDKMLEDKGNT 545

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            AVYLLYA TRI SIAR A I+ E LR  A+ TP+SLEHEKE+ LAK L++  DVL+ +T 
Sbjct: 546  AVYLLYALTRIRSIARAANISQEKLRKIAEDTPISLEHEKEWKLAKVLIKFPDVLIKITN 605

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +L LHHLCEY Y+IS AFSEFYDNCYC+EK+  G+I  V+ GR+LL EATA +M+KCF I
Sbjct: 606  NLYLHHLCEYCYEISCAFSEFYDNCYCVEKNELGEIVNVNIGRILLTEATAIIMEKCFSI 665

Query: 1064 LNIRTA 1069
            L +++ 
Sbjct: 666  LGLKSV 671



 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/431 (54%), Positives = 305/431 (70%), Gaps = 27/431 (6%)

Query: 18  LSTKGFISESA-TEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKK 76
           ++T  F+  S   ++ +  + +N KLK+R+AIL+R +  E  K G              K
Sbjct: 34  VTTNNFMINSVPIDEYVKLEQENIKLKYRVAILKRTVKAERAKLG-------------NK 80

Query: 77  MNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC 136
           + +   + +S+ D LS++F  A+ VA+P++ D    + S+N     KFGD+QCN AM L 
Sbjct: 81  LKMTENNVISIYDTLSNLFKEAISVAYPDVCDPPVIITSSNNP---KFGDYQCNSAMPLS 137

Query: 137 KIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ 196
           K   +   +  P D+A++I S V          + +I K+EV   GF+N++L R +A   
Sbjct: 138 KQLNNNEIRTKPQDVAKNIMSKVEE--------SSLISKLEVNGAGFINIYLKREFAQST 189

Query: 197 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
           +  ++ NG   P   KK +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+RLLE+LGHDV+R
Sbjct: 190 LNTLVKNGEAFPPYTKKQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARLLEFLGHDVLR 249

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           +NH+GDWGTQFGMLIAHLQDKFPDYL+ SPPI DLQ+FYKESK RFD DE FKKRAY CV
Sbjct: 250 INHIGDWGTQFGMLIAHLQDKFPDYLSISPPITDLQSFYKESKTRFDGDEEFKKRAYNCV 309

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ FD D  KAW++ICDVSR++F+KIY RL++ L ERGESFYQKHME +V  LE KGL
Sbjct: 310 VKLQAFDSDMIKAWQLICDVSRKEFEKIYTRLDIKLIERGESFYQKHMEAIVKDLEAKGL 369

Query: 377 LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RS 435
           LE D+GRK+MW ++   IP+TIVKSDGGFTYDTSD+AAI+QRIEEEKADW++YVTD  +S
Sbjct: 370 LEEDEGRKVMWSKENNEIPLTIVKSDGGFTYDTSDMAAIKQRIEEEKADWVIYVTDAGQS 429

Query: 436 YH-QVLQAIAE 445
            H QVL+  A+
Sbjct: 430 MHFQVLKNCAK 440



 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 218/382 (57%), Positives = 281/382 (73%), Gaps = 13/382 (3%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
            +  ++ ++      K+ +   + +S+ D LS++F  A+ VA+P++ D    + S+N    
Sbjct: 66   LKRTVKAERAKLGNKLKMTENNVISIYDTLSNLFKEAISVAYPDVCDPPVIITSSNNP-- 123

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             KFGD+QCN AM L K   +   +  P D+A++I S V          + +I K+EV   
Sbjct: 124  -KFGDYQCNSAMPLSKQLNNNEIRTKPQDVAKNIMSKVEE--------SSLISKLEVNGA 174

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            GF+N++L R +A   +  ++ NG   P   KK +V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 175  GFINIYLKREFAQSTLNTLVKNGEAFPPYTKKQKVIVDFSSPNIAKEMHVGHLRSTIIGD 234

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +I+RLLE+LGHDV+R+NH+GDWGTQFGMLIAHLQDKFPDYL+ SPPI DLQ+FYKESK R
Sbjct: 235  SIARLLEFLGHDVLRINHIGDWGTQFGMLIAHLQDKFPDYLSISPPITDLQSFYKESKTR 294

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 1378
            FD DE FKKRAY CVV LQ FD D  KAW++ICDVSR++F+KIY RL++ L ERGESFYQ
Sbjct: 295  FDGDEEFKKRAYNCVVKLQAFDSDMIKAWQLICDVSRKEFEKIYTRLDIKLIERGESFYQ 354

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 1438
            KHME +V  LE KGLLE D+GRK+MW ++   IP+TIVKSDGGFTYDTSD+AAI+QRIEE
Sbjct: 355  KHMEAIVKDLEAKGLLEEDEGRKVMWSKENNEIPLTIVKSDGGFTYDTSDMAAIKQRIEE 414

Query: 1439 EKADWIVYVTDH-RSYH-QVLQ 1458
            EKADW++YVTD  +S H QVL+
Sbjct: 415  EKADWVIYVTDAGQSMHFQVLK 436


>gi|170028825|ref|XP_001842295.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167877980|gb|EDS41363.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 664

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/593 (62%), Positives = 460/593 (77%), Gaps = 12/593 (2%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+ D+L+D+FT A+  AFP++     +V + +   V KFGD+QCN+AM + +  K    K
Sbjct: 78   SILDHLNDIFTQAIATAFPQVCADVPTVITVSG--VPKFGDYQCNNAMQIVQKLKALDVK 135

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
             NP D+A  I   V          + +I K+EVA  GFVNVFL + +  E I  I+ +GV
Sbjct: 136  TNPRDVAVKIMEAVPQ--------SPMISKVEVAGAGFVNVFLDKTFGAEAIMSILKDGV 187

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            +PP   +K RV+VDFSSPNIAKEMHVGHLRSTIIGD+I R LE+LGHDV+RLNHVGDWGT
Sbjct: 188  KPPVFARK-RVIVDFSSPNIAKEMHVGHLRSTIIGDSICRFLEFLGHDVLRLNHVGDWGT 246

Query: 656  QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
            QFGMLIAHLQD+FPDYL  SPPI DLQAFYKESK RFD DE FKKRAY CVV LQ  D D
Sbjct: 247  QFGMLIAHLQDRFPDYLKVSPPIGDLQAFYKESKTRFDSDEEFKKRAYACVVKLQGGDAD 306

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
              K W++ICDVSR++FQK+YDRL+V L ERGESFYQK ME +V  L K+  LE DDGRKI
Sbjct: 307  SLKGWKLICDVSRKEFQKVYDRLDVKLIERGESFYQKRMESIVKDLAKQQFLEEDDGRKI 366

Query: 776  MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
            MWGE++  IP+TI+KSDGGFTYDTSD+AAI+QR+ EEK +W+VYVTD GQ  HF  +  C
Sbjct: 367  MWGENKDGIPLTIIKSDGGFTYDTSDMAAIKQRLHEEKGEWLVYVTDAGQATHFYTIFSC 426

Query: 836  AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
            A++A IL+P   R+D VGFGVVLGED KKFKTRSGDTVKL+ELLDEGL+RSLDKL +K R
Sbjct: 427  ARRAKILDPAVHRVDHVGFGVVLGEDGKKFKTRSGDTVKLTELLDEGLKRSLDKLLEKER 486

Query: 896  HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIA 955
               LTP EL  AQ++VAYGCIKYADLSHNRN +Y+FSFDKML+D+GNTAVYLLYAYTRI 
Sbjct: 487  DKVLTPEELKAAQESVAYGCIKYADLSHNRNNEYIFSFDKMLEDKGNTAVYLLYAYTRIR 546

Query: 956  SIARTAGIN-SEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
            SIAR  G + + D+     ST +SL+HEKE+ LAK LL+  DV+ L++++LCLHHLCE++
Sbjct: 547  SIARNCGGDFANDIDKVIASTQLSLDHEKEWKLAKVLLKFTDVMKLISKNLCLHHLCEFV 606

Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            YD+ST F+EFYD+CYCIEK+ +G+I  ++ GR+LL EAT++V+ KCFDIL ++
Sbjct: 607  YDVSTTFTEFYDSCYCIEKNKQGEIVKINAGRVLLCEATSRVLGKCFDILGLK 659



 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/429 (55%), Positives = 298/429 (69%), Gaps = 31/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           KE ++++    +N+  T   + E   E +   Q++N KLKHRL+IL RAIA E       
Sbjct: 16  KEREIRQLQDAINDARTNVGLEEGNPE-LEKLQVENMKLKHRLSILNRAIAAE------- 67

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
              S  +K +A           S+ D+L+D+FT A+  AFP++     +V + +   V K
Sbjct: 68  ---SGSSKPSANS---------SILDHLNDIFTQAIATAFPQVCADVPTVITVSG--VPK 113

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN+AM + +  K    K NP D+A  I   V          + +I K+EVA  GF
Sbjct: 114 FGDYQCNNAMQIVQKLKALDVKTNPRDVAVKIMEAVPQ--------SPMISKVEVAGAGF 165

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           VNVFL + +  E I  I+ +GV+PP   +K RV+VDFSSPNIAKEMHVGHLRSTIIGD+I
Sbjct: 166 VNVFLDKTFGAEAIMSILKDGVKPPVFARK-RVIVDFSSPNIAKEMHVGHLRSTIIGDSI 224

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            R LE+LGHDV+RLNHVGDWGTQFGMLIAHLQD+FPDYL  SPPI DLQAFYKESK RFD
Sbjct: 225 CRFLEFLGHDVLRLNHVGDWGTQFGMLIAHLQDRFPDYLKVSPPIGDLQAFYKESKTRFD 284

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            DE FKKRAY CVV LQ  D D  K W++ICDVSR++FQK+YDRL+V L ERGESFYQK 
Sbjct: 285 SDEEFKKRAYACVVKLQGGDADSLKGWKLICDVSRKEFQKVYDRLDVKLIERGESFYQKR 344

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           ME +V  L K+  LE DDGRKIMWGE++  IP+TI+KSDGGFTYDTSD+AAI+QR+ EEK
Sbjct: 345 MESIVKDLAKQQFLEEDDGRKIMWGENKDGIPLTIIKSDGGFTYDTSDMAAIKQRLHEEK 404

Query: 424 ADWIVYVTD 432
            +W+VYVTD
Sbjct: 405 GEWLVYVTD 413



 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 215/347 (61%), Positives = 261/347 (75%), Gaps = 11/347 (3%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+ D+L+D+FT A+  AFP++     +V + +   V KFGD+QCN+AM + +  K    K
Sbjct: 78   SILDHLNDIFTQAIATAFPQVCADVPTVITVSG--VPKFGDYQCNNAMQIVQKLKALDVK 135

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
             NP D+A  I   V          + +I K+EVA  GFVNVFL + +  E I  I+ +GV
Sbjct: 136  TNPRDVAVKIMEAVPQ--------SPMISKVEVAGAGFVNVFLDKTFGAEAIMSILKDGV 187

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            +PP   +K RV+VDFSSPNIAKEMHVGHLRSTIIGD+I R LE+LGHDV+RLNHVGDWGT
Sbjct: 188  KPPVFARK-RVIVDFSSPNIAKEMHVGHLRSTIIGDSICRFLEFLGHDVLRLNHVGDWGT 246

Query: 1283 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
            QFGMLIAHLQD+FPDYL  SPPI DLQAFYKESK RFD DE FKKRAY CVV LQ  D D
Sbjct: 247  QFGMLIAHLQDRFPDYLKVSPPIGDLQAFYKESKTRFDSDEEFKKRAYACVVKLQGGDAD 306

Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
              K W++ICDVSR++FQK+YDRL+V L ERGESFYQK ME +V  L K+  LE DDGRKI
Sbjct: 307  SLKGWKLICDVSRKEFQKVYDRLDVKLIERGESFYQKRMESIVKDLAKQQFLEEDDGRKI 366

Query: 1403 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            MWGE++  IP+TI+KSDGGFTYDTSD+AAI+QR+ EEK +W+VYVTD
Sbjct: 367  MWGENKDGIPLTIIKSDGGFTYDTSDMAAIKQRLHEEKGEWLVYVTD 413


>gi|383862219|ref|XP_003706581.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Megachile
            rotundata]
          Length = 675

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/593 (61%), Positives = 462/593 (77%), Gaps = 12/593 (2%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +S+ D L D+F +A+  A+P++ D    + S+N     KFGD+QCN AM L K     G 
Sbjct: 90   VSICDTLFDLFKNAITAAYPDVCDPPVIITSSNNP---KFGDYQCNSAMPLSKQLNSNGN 146

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K NP ++A +I S V          + +I K+EVA  GF+N++L + +A   + +++ +G
Sbjct: 147  KTNPRNVANNILSKVQE--------SPLISKLEVAGAGFINIYLKKEFAQTTLSNLVKSG 198

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
               P   KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I+ LLE+LGHDV+R+NHVGDWG
Sbjct: 199  KAFPPHVKKQRVLVDFSSPNIAKEMHVGHLRSTIIGDSIATLLEFLGHDVLRINHVGDWG 258

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHLQD+FPDYL  SPPI DLQ+FYKESK RFD DE FKKRAY CVV LQ FDP
Sbjct: 259  TQFGMLIAHLQDRFPDYLIVSPPITDLQSFYKESKIRFDTDEDFKKRAYSCVVKLQAFDP 318

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            D  KAWE+ICDVSR++FQK+Y+RL + L ERGESFYQK ME +V  LE  GLLE D+GRK
Sbjct: 319  DMIKAWELICDVSRKEFQKVYNRLGIRLIERGESFYQKRMESIVKELELNGLLEDDEGRK 378

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            +MWG+  G IP+TI+KSDGGFTYDTSD+AAI+QR+EEEKADW++YVTD GQ  HF++L+ 
Sbjct: 379  VMWGKHDGEIPLTIIKSDGGFTYDTSDMAAIKQRLEEEKADWVIYVTDAGQATHFKILKS 438

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
            CA++AGI+     R+D VGFGVVLG D+KKFKTRSGDTVKL++LLDEGL+R+L+KL +K 
Sbjct: 439  CAERAGIVKSCH-RIDHVGFGVVLGSDKKKFKTRSGDTVKLTDLLDEGLKRALEKLIEKG 497

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            R   LT  EL  AQ+++AYGCIKYADLSHNRN +Y+FSFDKML+D+GNTAVYLLYA TRI
Sbjct: 498  RDKVLTEEELKAAQESIAYGCIKYADLSHNRNHEYIFSFDKMLEDKGNTAVYLLYALTRI 557

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
             SIAR A I+ E LR  A+STP+SLEH+KE+ LAK LL+  DVL+ +T+DL +H LCE++
Sbjct: 558  RSIARAANISPEKLREMAESTPISLEHDKEWKLAKVLLKFPDVLIKITKDLYVHQLCEFV 617

Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            Y+IS AF+EFYDNCYC+EK+  G+I  ++ GR+LL EATA +M+ CF IL ++
Sbjct: 618  YEISCAFTEFYDNCYCVEKNELGEITKINVGRMLLTEATAIIMETCFSILGLK 670



 Score =  471 bits (1212), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/410 (56%), Positives = 296/410 (72%), Gaps = 25/410 (6%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N KLKHR+AIL+R I  E  K   +  ++++        N+ V    S+ D L D+F +
Sbjct: 55  ENIKLKHRIAILKRTIEAERAKAQHNMKMTTE--------NIVV----SICDTLFDLFKN 102

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A+  A+P++ D    + S+N     KFGD+QCN AM L K     G K NP ++A +I S
Sbjct: 103 AITAAYPDVCDPPVIITSSNNP---KFGDYQCNSAMPLSKQLNSNGNKTNPRNVANNILS 159

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVL 217
            V          + +I K+EVA  GF+N++L + +A   + +++ +G   P   KK RVL
Sbjct: 160 KVQE--------SPLISKLEVAGAGFINIYLKKEFAQTTLSNLVKSGKAFPPHVKKQRVL 211

Query: 218 VDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDK 277
           VDFSSPNIAKEMHVGHLRSTIIGD+I+ LLE+LGHDV+R+NHVGDWGTQFGMLIAHLQD+
Sbjct: 212 VDFSSPNIAKEMHVGHLRSTIIGDSIATLLEFLGHDVLRINHVGDWGTQFGMLIAHLQDR 271

Query: 278 FPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           FPDYL  SPPI DLQ+FYKESK RFD DE FKKRAY CVV LQ FDPD  KAWE+ICDVS
Sbjct: 272 FPDYLIVSPPITDLQSFYKESKIRFDTDEDFKKRAYSCVVKLQAFDPDMIKAWELICDVS 331

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 397
           R++FQK+Y+RL + L ERGESFYQK ME +V  LE  GLLE D+GRK+MWG+  G IP+T
Sbjct: 332 RKEFQKVYNRLGIRLIERGESFYQKRMESIVKELELNGLLEDDEGRKVMWGKHDGEIPLT 391

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIAE 445
           I+KSDGGFTYDTSD+AAI+QR+EEEKADW++YVTD    ++ ++L++ AE
Sbjct: 392 IIKSDGGFTYDTSDMAAIKQRLEEEKADWVIYVTDAGQATHFKILKSCAE 441



 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/348 (61%), Positives = 264/348 (75%), Gaps = 11/348 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +S+ D L D+F +A+  A+P++ D    + S+N     KFGD+QCN AM L K     G 
Sbjct: 90   VSICDTLFDLFKNAITAAYPDVCDPPVIITSSNNP---KFGDYQCNSAMPLSKQLNSNGN 146

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K NP ++A +I S V          + +I K+EVA  GF+N++L + +A   + +++ +G
Sbjct: 147  KTNPRNVANNILSKVQE--------SPLISKLEVAGAGFINIYLKKEFAQTTLSNLVKSG 198

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
               P   KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I+ LLE+LGHDV+R+NHVGDWG
Sbjct: 199  KAFPPHVKKQRVLVDFSSPNIAKEMHVGHLRSTIIGDSIATLLEFLGHDVLRINHVGDWG 258

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQD+FPDYL  SPPI DLQ+FYKESK RFD DE FKKRAY CVV LQ FDP
Sbjct: 259  TQFGMLIAHLQDRFPDYLIVSPPITDLQSFYKESKIRFDTDEDFKKRAYSCVVKLQAFDP 318

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D  KAWE+ICDVSR++FQK+Y+RL + L ERGESFYQK ME +V  LE  GLLE D+GRK
Sbjct: 319  DMIKAWELICDVSRKEFQKVYNRLGIRLIERGESFYQKRMESIVKELELNGLLEDDEGRK 378

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +MWG+  G IP+TI+KSDGGFTYDTSD+AAI+QR+EEEKADW++YVTD
Sbjct: 379  VMWGKHDGEIPLTIIKSDGGFTYDTSDMAAIKQRLEEEKADWVIYVTD 426


>gi|380013212|ref|XP_003690660.1| PREDICTED: LOW QUALITY PROTEIN: arginine--tRNA ligase,
            cytoplasmic-like [Apis florea]
          Length = 674

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/615 (60%), Positives = 468/615 (76%), Gaps = 21/615 (3%)

Query: 454  SSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA-STNEKYVH 512
            + S S+TK T         + +S+ D L ++F  A+  A+P + +    ++ STN K   
Sbjct: 75   AKSESKTKTTE-------NNAVSIYDTLYNLFEKAISTAYPNVCEPPVIISISTNPK--- 124

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
             FGD+QCN AM LCK   + G +  P D+A +I S +          + ++ K+EVA  G
Sbjct: 125  -FGDYQCNSAMPLCKQLNNDGIQTKPRDVANNIMSKIEE--------SSLVSKLEVAGAG 175

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N++L + +    +  ++ NG   P   KK +V++DFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 176  FINIYLKKEFTQIILTTLVKNGKVFPPYTKKQKVIIDFSSPNIAKEMHVGHLRSTIIGDS 235

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            I+RLLE+LGHDV+R+NH+GDWGTQFGMLIAHLQD+FPDYLT  PPI DLQ+FYKESK RF
Sbjct: 236  IARLLEFLGHDVLRINHIGDWGTQFGMLIAHLQDRFPDYLTICPPIIDLQSFYKESKARF 295

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 752
            DEDE FKKRAY CVV LQ FDP+  KAW++ICDVSR++F+KIY RL++ L ERGESFYQK
Sbjct: 296  DEDEEFKKRAYNCVVKLQAFDPEMIKAWQLICDVSRKEFEKIYVRLDINLIERGESFYQK 355

Query: 753  HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 812
            HME +V  LE KGLLE D+GRKIMWG+    IP+TIVKSDGGFTYDTSD+AA++QRIEEE
Sbjct: 356  HMEIIVKDLEAKGLLENDEGRKIMWGKSNSEIPLTIVKSDGGFTYDTSDMAALKQRIEEE 415

Query: 813  KADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDT 872
            KA+WI+YVTD GQ  HF++L+ C ++AGI+  +  RMD VGFGVVLG+D+KKFKTRSGDT
Sbjct: 416  KANWIIYVTDAGQAKHFQILKSCGERAGIIK-SYHRMDHVGFGVVLGKDKKKFKTRSGDT 474

Query: 873  VKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFS 932
            VKLSELLDEGL+R+LDKLK+K R   LT  EL  AQ+++AYGCIKYADLSHNRN +YVFS
Sbjct: 475  VKLSELLDEGLKRALDKLKEKERDKVLTEEELKIAQESIAYGCIKYADLSHNRNHEYVFS 534

Query: 933  FDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLL 992
            FDKML+D+GNTAVYLLYA TRI SIAR A I    L+  AQ   +SLEHEKE+ LAK L+
Sbjct: 535  FDKMLEDKGNTAVYLLYALTRIRSIARAANITQNKLQELAQCNQISLEHEKEWKLAKVLI 594

Query: 993  RMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEA 1052
            +  DVL+ +T+DL LH LCEY Y+IS AFSEFYDNCYC+EK+  G+I  ++ GR+LL EA
Sbjct: 595  KFADVLIKITKDLYLHQLCEYCYEISCAFSEFYDNCYCVEKNELGEIVNINIGRMLLTEA 654

Query: 1053 TAKVMKKCFDILNIR 1067
            TA +M+KCF IL ++
Sbjct: 655  TAIIMEKCFSILGLK 669



 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/436 (53%), Positives = 303/436 (69%), Gaps = 37/436 (8%)

Query: 13  SKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKG 72
           SK+N +S   +I           + +N KLKHR+AIL+R I  E  K   S S +  T+ 
Sbjct: 39  SKINSISEDEYIK---------LEQENIKLKHRVAILKRTIETERAK---SESKTKTTEN 86

Query: 73  AAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA-STNEKYVHKFGDFQCND 131
            A          +S+ D L ++F  A+  A+P + +    ++ STN K    FGD+QCN 
Sbjct: 87  NA----------VSIYDTLYNLFEKAISTAYPNVCEPPVIISISTNPK----FGDYQCNS 132

Query: 132 AMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRV 191
           AM LCK   + G +  P D+A +I S +          + ++ K+EVA  GF+N++L + 
Sbjct: 133 AMPLCKQLNNDGIQTKPRDVANNIMSKIEE--------SSLVSKLEVAGAGFINIYLKKE 184

Query: 192 YAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG 251
           +    +  ++ NG   P   KK +V++DFSSPNIAKEMHVGHLRSTIIGD+I+RLLE+LG
Sbjct: 185 FTQIILTTLVKNGKVFPPYTKKQKVIIDFSSPNIAKEMHVGHLRSTIIGDSIARLLEFLG 244

Query: 252 HDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKR 311
           HDV+R+NH+GDWGTQFGMLIAHLQD+FPDYLT  PPI DLQ+FYKESK RFDEDE FKKR
Sbjct: 245 HDVLRINHIGDWGTQFGMLIAHLQDRFPDYLTICPPIIDLQSFYKESKARFDEDEEFKKR 304

Query: 312 AYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYL 371
           AY CVV LQ FDP+  KAW++ICDVSR++F+KIY RL++ L ERGESFYQKHME +V  L
Sbjct: 305 AYNCVVKLQAFDPEMIKAWQLICDVSRKEFEKIYVRLDINLIERGESFYQKHMEIIVKDL 364

Query: 372 EKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
           E KGLLE D+GRKIMWG+    IP+TIVKSDGGFTYDTSD+AA++QRIEEEKA+WI+YVT
Sbjct: 365 EAKGLLENDEGRKIMWGKSNSEIPLTIVKSDGGFTYDTSDMAALKQRIEEEKANWIIYVT 424

Query: 432 D--HRSYHQVLQAIAE 445
           D     + Q+L++  E
Sbjct: 425 DAGQAKHFQILKSCGE 440



 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/372 (56%), Positives = 273/372 (73%), Gaps = 13/372 (3%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA-STNEKY 1137
            +  +I ++   +  K      + +S+ D L ++F  A+  A+P + +    ++ STN K 
Sbjct: 66   LKRTIETERAKSESKTKTTENNAVSIYDTLYNLFEKAISTAYPNVCEPPVIISISTNPK- 124

Query: 1138 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 1197
               FGD+QCN AM LCK   + G +  P D+A +I S +          + ++ K+EVA 
Sbjct: 125  ---FGDYQCNSAMPLCKQLNNDGIQTKPRDVANNIMSKIEE--------SSLVSKLEVAG 173

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
             GF+N++L + +    +  ++ NG   P   KK +V++DFSSPNIAKEMHVGHLRSTIIG
Sbjct: 174  AGFINIYLKKEFTQIILTTLVKNGKVFPPYTKKQKVIIDFSSPNIAKEMHVGHLRSTIIG 233

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+I+RLLE+LGHDV+R+NH+GDWGTQFGMLIAHLQD+FPDYLT  PPI DLQ+FYKESK 
Sbjct: 234  DSIARLLEFLGHDVLRINHIGDWGTQFGMLIAHLQDRFPDYLTICPPIIDLQSFYKESKA 293

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
            RFDEDE FKKRAY CVV LQ FDP+  KAW++ICDVSR++F+KIY RL++ L ERGESFY
Sbjct: 294  RFDEDEEFKKRAYNCVVKLQAFDPEMIKAWQLICDVSRKEFEKIYVRLDINLIERGESFY 353

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 1437
            QKHME +V  LE KGLLE D+GRKIMWG+    IP+TIVKSDGGFTYDTSD+AA++QRIE
Sbjct: 354  QKHMEIIVKDLEAKGLLENDEGRKIMWGKSNSEIPLTIVKSDGGFTYDTSDMAALKQRIE 413

Query: 1438 EEKADWIVYVTD 1449
            EEKA+WI+YVTD
Sbjct: 414  EEKANWIIYVTD 425


>gi|340712657|ref|XP_003394872.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Bombus
            terrestris]
          Length = 674

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/606 (60%), Positives = 465/606 (76%), Gaps = 12/606 (1%)

Query: 464  AKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAM 523
              K+ +   + +S+ D LS++F  A+ VA+P++ D    + S+N     KFGD+QCN AM
Sbjct: 78   GNKLKMTENNVISIYDTLSNLFKEAISVAYPDVCDPPVIITSSNNP---KFGDYQCNSAM 134

Query: 524  ALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYA 583
             L K   +   +  P D+A++I S V          + +I K+EV   GF+N++L R +A
Sbjct: 135  PLSKQLSNNEIRTKPQDVAKNIMSKVEE--------SSLISKLEVTGAGFINIYLKREFA 186

Query: 584  GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 643
               +  ++ NG   P   K+ +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+RLLE+LGHD
Sbjct: 187  QSTLNTLVKNGEAFPPNTKRQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARLLEFLGHD 246

Query: 644  VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 703
            V+R+NH+GDWGTQFGMLIAHLQDKFPD L+ SPPI DLQ+FYKESK RFD DE FKKRAY
Sbjct: 247  VLRINHIGDWGTQFGMLIAHLQDKFPDCLSISPPITDLQSFYKESKTRFDGDEEFKKRAY 306

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 763
             CVV LQ  DPD  KAW++ICDVSR++F+KIY RL++ L ERGESFYQKHME +V  LE 
Sbjct: 307  NCVVKLQASDPDMIKAWQLICDVSRKEFEKIYTRLDIKLIERGESFYQKHMEAIVKDLEA 366

Query: 764  KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
            KGLLE D+GRK+MW +    IP+TIVKSDGGFTYDTSD+AAI+QRIEEEKADW++YVTD 
Sbjct: 367  KGLLEEDEGRKVMWSKQNNEIPLTIVKSDGGFTYDTSDMAAIKQRIEEEKADWVIYVTDA 426

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ +HF++L+ CAK+A I+  ++ R+D VGFGVVLG D+KKFKTRSGDTVKLS+LLDEGL
Sbjct: 427  GQSMHFQVLKNCAKRASIIE-SRHRIDHVGFGVVLGNDKKKFKTRSGDTVKLSDLLDEGL 485

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
            +R+ +KL +K R   LT  EL  AQ+++AYGCIKYADLSHNRN +YVFSFDKML+D+GNT
Sbjct: 486  KRAQEKLIEKERDKVLTEEELKIAQESIAYGCIKYADLSHNRNHEYVFSFDKMLEDKGNT 545

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            AVYLLYA TRI SIAR A I+ E LR  A+ TP+SLEHEKE+ LAK L++  DVL+ +T 
Sbjct: 546  AVYLLYALTRIRSIARAANISQEKLREIAEDTPISLEHEKEWKLAKVLIKFPDVLIKITN 605

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +L LH LCEY Y+IS AFSEFYDNCYC+EK+  G+I  V+ GR+LL EATA +M+KCF I
Sbjct: 606  NLYLHQLCEYCYEISCAFSEFYDNCYCVEKNELGEIVNVNIGRILLTEATAIIMEKCFSI 665

Query: 1064 LNIRTA 1069
            L +++ 
Sbjct: 666  LGLKSV 671



 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/431 (53%), Positives = 303/431 (70%), Gaps = 27/431 (6%)

Query: 18  LSTKGFISESA-TEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKK 76
           ++T  F+  S   ++ +  + +N KLK+R+AIL+R +  E  K G              K
Sbjct: 34  ITTNNFMINSVPIDEYVKLEQENIKLKYRVAILKRTVKAERAKLG-------------NK 80

Query: 77  MNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC 136
           + +   + +S+ D LS++F  A+ VA+P++ D    + S+N     KFGD+QCN AM L 
Sbjct: 81  LKMTENNVISIYDTLSNLFKEAISVAYPDVCDPPVIITSSNNP---KFGDYQCNSAMPLS 137

Query: 137 KIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ 196
           K   +   +  P D+A++I S V          + +I K+EV   GF+N++L R +A   
Sbjct: 138 KQLSNNEIRTKPQDVAKNIMSKVEE--------SSLISKLEVTGAGFINIYLKREFAQST 189

Query: 197 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
           +  ++ NG   P   K+ +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+RLLE+LGHDV+R
Sbjct: 190 LNTLVKNGEAFPPNTKRQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARLLEFLGHDVLR 249

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           +NH+GDWGTQFGMLIAHLQDKFPD L+ SPPI DLQ+FYKESK RFD DE FKKRAY CV
Sbjct: 250 INHIGDWGTQFGMLIAHLQDKFPDCLSISPPITDLQSFYKESKTRFDGDEEFKKRAYNCV 309

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ  DPD  KAW++ICDVSR++F+KIY RL++ L ERGESFYQKHME +V  LE KGL
Sbjct: 310 VKLQASDPDMIKAWQLICDVSRKEFEKIYTRLDIKLIERGESFYQKHMEAIVKDLEAKGL 369

Query: 377 LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RS 435
           LE D+GRK+MW +    IP+TIVKSDGGFTYDTSD+AAI+QRIEEEKADW++YVTD  +S
Sbjct: 370 LEEDEGRKVMWSKQNNEIPLTIVKSDGGFTYDTSDMAAIKQRIEEEKADWVIYVTDAGQS 429

Query: 436 YH-QVLQAIAE 445
            H QVL+  A+
Sbjct: 430 MHFQVLKNCAK 440



 Score =  451 bits (1160), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/382 (56%), Positives = 279/382 (73%), Gaps = 13/382 (3%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
            +  ++ ++      K+ +   + +S+ D LS++F  A+ VA+P++ D    + S+N    
Sbjct: 66   LKRTVKAERAKLGNKLKMTENNVISIYDTLSNLFKEAISVAYPDVCDPPVIITSSNNP-- 123

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             KFGD+QCN AM L K   +   +  P D+A++I S V          + +I K+EV   
Sbjct: 124  -KFGDYQCNSAMPLSKQLSNNEIRTKPQDVAKNIMSKVEE--------SSLISKLEVTGA 174

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            GF+N++L R +A   +  ++ NG   P   K+ +V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 175  GFINIYLKREFAQSTLNTLVKNGEAFPPNTKRQKVIVDFSSPNIAKEMHVGHLRSTIIGD 234

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +I+RLLE+LGHDV+R+NH+GDWGTQFGMLIAHLQDKFPD L+ SPPI DLQ+FYKESK R
Sbjct: 235  SIARLLEFLGHDVLRINHIGDWGTQFGMLIAHLQDKFPDCLSISPPITDLQSFYKESKTR 294

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 1378
            FD DE FKKRAY CVV LQ  DPD  KAW++ICDVSR++F+KIY RL++ L ERGESFYQ
Sbjct: 295  FDGDEEFKKRAYNCVVKLQASDPDMIKAWQLICDVSRKEFEKIYTRLDIKLIERGESFYQ 354

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 1438
            KHME +V  LE KGLLE D+GRK+MW +    IP+TIVKSDGGFTYDTSD+AAI+QRIEE
Sbjct: 355  KHMEAIVKDLEAKGLLEEDEGRKVMWSKQNNEIPLTIVKSDGGFTYDTSDMAAIKQRIEE 414

Query: 1439 EKADWIVYVTDH-RSYH-QVLQ 1458
            EKADW++YVTD  +S H QVL+
Sbjct: 415  EKADWVIYVTDAGQSMHFQVLK 436


>gi|66501636|ref|XP_623301.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Apis mellifera]
          Length = 674

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/615 (60%), Positives = 470/615 (76%), Gaps = 21/615 (3%)

Query: 454  SSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA-STNEKYVH 512
            + S S+TK T         + +S+ D L ++F  A+ +A+P + +    ++ STN K   
Sbjct: 75   AKSESKTKATE-------NNAVSIYDTLYNLFEKAISIAYPNVCEPPVIISISTNPK--- 124

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
             FGD+QCN AM LCK   + G +  P D+A +I S +          + ++ K+EVA  G
Sbjct: 125  -FGDYQCNSAMPLCKQLNNDGIQTKPRDVANNIMSKIEE--------SSLVSKLEVAGAG 175

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N++L + +    +  ++ NG   P   KK RV+VDFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 176  FINIYLKKEFIQIILSTLVKNGKVFPPYTKKQRVIVDFSSPNIAKEMHVGHLRSTIIGDS 235

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            I+RLLE+LGHDV+R+NHVGDWGTQFGMLIAHLQ++FPDYLT SPPI DLQ+FYKESK RF
Sbjct: 236  IARLLEFLGHDVLRINHVGDWGTQFGMLIAHLQNRFPDYLTISPPIIDLQSFYKESKARF 295

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 752
            D+DE FKK AY CVV LQ FDP+  KAW++ICDVSR++F+KIY RL++ L ERGESFYQK
Sbjct: 296  DKDEEFKKHAYNCVVKLQTFDPEITKAWQLICDVSRKEFEKIYVRLDINLIERGESFYQK 355

Query: 753  HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 812
            HME +V  LE KGLLE D+GRKIMWG+    IP+TIVKSDGGFTYDTSD+AA++QRIEEE
Sbjct: 356  HMEVIVKDLETKGLLEDDEGRKIMWGKRNNEIPLTIVKSDGGFTYDTSDMAALKQRIEEE 415

Query: 813  KADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDT 872
            +ADWI+YVTD GQ  HF++L+ CA++AGI+  +  R+D VGFGVVLG+D+KKFKTRSGDT
Sbjct: 416  RADWIIYVTDAGQAKHFQILKSCAERAGII-KSYHRIDHVGFGVVLGKDKKKFKTRSGDT 474

Query: 873  VKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFS 932
            VKLS+LLDEGL+R+LDKLK+K R   LT  EL  AQ+++AYGCIKYADLSHNRN +YVFS
Sbjct: 475  VKLSDLLDEGLKRALDKLKEKERDKVLTEEELKIAQESIAYGCIKYADLSHNRNHEYVFS 534

Query: 933  FDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLL 992
            FDKML+D+GNTAVYLLYA TRI SIAR A I    L+  AQS  +SLEHEKE+ LAK L+
Sbjct: 535  FDKMLEDKGNTAVYLLYALTRIRSIARAANITQNKLQELAQSNQISLEHEKEWKLAKVLI 594

Query: 993  RMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEA 1052
            +  DVL+ +T+DL LH LCEY Y+IS  FSEFYDNCYC+EK+  G+I  ++ GR+LL EA
Sbjct: 595  KFADVLIKITKDLYLHQLCEYCYEISCTFSEFYDNCYCVEKNELGEIVNINIGRMLLTEA 654

Query: 1053 TAKVMKKCFDILNIR 1067
            TA +M+KCF IL ++
Sbjct: 655  TAIIMEKCFSILGLK 669



 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/411 (56%), Positives = 297/411 (72%), Gaps = 28/411 (6%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N KLKHR+AIL+R I  E  K        S++K  A + N      +S+ D L ++F  
Sbjct: 55  ENIKLKHRVAILKRTIETERAK--------SESKTKATENNA-----VSIYDTLYNLFEK 101

Query: 98  AVQVAFPELGDKTASVA-STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 156
           A+ +A+P + +    ++ STN K    FGD+QCN AM LCK   + G +  P D+A +I 
Sbjct: 102 AISIAYPNVCEPPVIISISTNPK----FGDYQCNSAMPLCKQLNNDGIQTKPRDVANNIM 157

Query: 157 SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRV 216
           S +          + ++ K+EVA  GF+N++L + +    +  ++ NG   P   KK RV
Sbjct: 158 SKIEE--------SSLVSKLEVAGAGFINIYLKKEFIQIILSTLVKNGKVFPPYTKKQRV 209

Query: 217 LVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD 276
           +VDFSSPNIAKEMHVGHLRSTIIGD+I+RLLE+LGHDV+R+NHVGDWGTQFGMLIAHLQ+
Sbjct: 210 IVDFSSPNIAKEMHVGHLRSTIIGDSIARLLEFLGHDVLRINHVGDWGTQFGMLIAHLQN 269

Query: 277 KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDV 336
           +FPDYLT SPPI DLQ+FYKESK RFD+DE FKK AY CVV LQ FDP+  KAW++ICDV
Sbjct: 270 RFPDYLTISPPIIDLQSFYKESKARFDKDEEFKKHAYNCVVKLQTFDPEITKAWQLICDV 329

Query: 337 SRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPM 396
           SR++F+KIY RL++ L ERGESFYQKHME +V  LE KGLLE D+GRKIMWG+    IP+
Sbjct: 330 SRKEFEKIYVRLDINLIERGESFYQKHMEVIVKDLETKGLLEDDEGRKIMWGKRNNEIPL 389

Query: 397 TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIAE 445
           TIVKSDGGFTYDTSD+AA++QRIEEE+ADWI+YVTD     + Q+L++ AE
Sbjct: 390 TIVKSDGGFTYDTSDMAALKQRIEEERADWIIYVTDAGQAKHFQILKSCAE 440



 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/372 (56%), Positives = 274/372 (73%), Gaps = 13/372 (3%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA-STNEKY 1137
            +  +I ++   +  K      + +S+ D L ++F  A+ +A+P + +    ++ STN K 
Sbjct: 66   LKRTIETERAKSESKTKATENNAVSIYDTLYNLFEKAISIAYPNVCEPPVIISISTNPK- 124

Query: 1138 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 1197
               FGD+QCN AM LCK   + G +  P D+A +I S +          + ++ K+EVA 
Sbjct: 125  ---FGDYQCNSAMPLCKQLNNDGIQTKPRDVANNIMSKIEE--------SSLVSKLEVAG 173

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
             GF+N++L + +    +  ++ NG   P   KK RV+VDFSSPNIAKEMHVGHLRSTIIG
Sbjct: 174  AGFINIYLKKEFIQIILSTLVKNGKVFPPYTKKQRVIVDFSSPNIAKEMHVGHLRSTIIG 233

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+I+RLLE+LGHDV+R+NHVGDWGTQFGMLIAHLQ++FPDYLT SPPI DLQ+FYKESK 
Sbjct: 234  DSIARLLEFLGHDVLRINHVGDWGTQFGMLIAHLQNRFPDYLTISPPIIDLQSFYKESKA 293

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
            RFD+DE FKK AY CVV LQ FDP+  KAW++ICDVSR++F+KIY RL++ L ERGESFY
Sbjct: 294  RFDKDEEFKKHAYNCVVKLQTFDPEITKAWQLICDVSRKEFEKIYVRLDINLIERGESFY 353

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 1437
            QKHME +V  LE KGLLE D+GRKIMWG+    IP+TIVKSDGGFTYDTSD+AA++QRIE
Sbjct: 354  QKHMEVIVKDLETKGLLEDDEGRKIMWGKRNNEIPLTIVKSDGGFTYDTSDMAALKQRIE 413

Query: 1438 EEKADWIVYVTD 1449
            EE+ADWI+YVTD
Sbjct: 414  EERADWIIYVTD 425


>gi|91080725|ref|XP_975392.1| PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum]
 gi|270005463|gb|EFA01911.1| hypothetical protein TcasGA2_TC007521 [Tribolium castaneum]
          Length = 671

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/620 (60%), Positives = 474/620 (76%), Gaps = 21/620 (3%)

Query: 449  KQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNE 508
            K+ I+S S SQT   + +M        ++++ L ++F  A+  A P++ D    +  +N 
Sbjct: 67   KRAIASLSHSQTSRDSTRMQ-------NIQEILDEIFGAAISSACPDITDAPVVITLSNN 119

Query: 509  KYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEV 568
                KFGD+QCN AM +  I+K  G+K +P DIA  I          N S  +++DK+EV
Sbjct: 120  A---KFGDYQCNSAMQISNIYKQLGKKVSPRDIANKIVE--------NVSPHELVDKLEV 168

Query: 569  AKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            A PGF+NVF+S+ +    +  I  +GV+PP   KKLRV+VD SSPNIAKEMHVGHLRSTI
Sbjct: 169  AGPGFINVFVSKAFGLRNLSTIFTHGVRPPPY-KKLRVVVDLSSPNIAKEMHVGHLRSTI 227

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGDTI RLLE+LGHDV+R+NH+GDWGTQFGMLI HLQ+KFPDYL+K+PPI+DLQAFYKES
Sbjct: 228  IGDTICRLLEFLGHDVLRINHIGDWGTQFGMLIVHLQEKFPDYLSKAPPISDLQAFYKES 287

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 748
            KKRFDEDE FKKRAY  VV LQ  DP+Y KAW++ICDVSR++FQ IYDRL+V L ERGES
Sbjct: 288  KKRFDEDEDFKKRAYAGVVKLQSGDPNYIKAWQLICDVSRKEFQVIYDRLDVKLIERGES 347

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-DRGSIPMTIVKSDGGFTYDTSDLAAIRQ 807
            FYQ  M  +V  LE  G LE D+GRK+MWG+ + G+IP T+VKSDGG+TYDTSDLA I+Q
Sbjct: 348  FYQSRMNDIVKELEAGGYLEDDEGRKVMWGDKNDGNIPFTVVKSDGGYTYDTSDLATIKQ 407

Query: 808  RIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKT 867
            RI EEK DW++YVTD GQG HF +L + A+K G+L  N  R+D V FGVVLGED+KKFKT
Sbjct: 408  RIVEEKGDWLIYVTDAGQGTHFYILFQIARKIGLLTDN-IRVDHVPFGVVLGEDKKKFKT 466

Query: 868  RSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNL 927
            RSGDTV+L +LL+EGL+R+LDKLK+K R   LTP EL +AQ+++AYGCIKYADLSHNR+ 
Sbjct: 467  RSGDTVRLIDLLEEGLKRALDKLKEKGRDQVLTPEELKQAQESIAYGCIKYADLSHNRHH 526

Query: 928  DYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFAL 987
            +YVFSFDKML+D+GNTAVYLLYAYTRI SIARTA  + + +   A+S  +SL+HEKE+ L
Sbjct: 527  EYVFSFDKMLEDKGNTAVYLLYAYTRIRSIARTANFDDKKIEDVAKSHTISLDHEKEWKL 586

Query: 988  AKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRL 1047
            AK LL+  + L  VT+DLC HHLCEY+Y+I+T F+EFYD+CYC+EKD+ G I  V+ GR+
Sbjct: 587  AKVLLKFPEELDKVTKDLCPHHLCEYVYEIATTFTEFYDSCYCVEKDSSGDIVKVNHGRI 646

Query: 1048 LLAEATAKVMKKCFDILNIR 1067
            LLAEATA+VM KC DIL ++
Sbjct: 647  LLAEATARVMAKCLDILGLK 666



 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/396 (58%), Positives = 287/396 (72%), Gaps = 29/396 (7%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +NTKLKHRL IL+RAIA         S   SQT   + +M        ++++ L ++F  
Sbjct: 55  ENTKLKHRLTILKRAIA---------SLSHSQTSRDSTRMQ-------NIQEILDEIFGA 98

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A+  A P++ D    +  +N     KFGD+QCN AM +  I+K  G+K +P DIA  I  
Sbjct: 99  AISSACPDITDAPVVITLSNNA---KFGDYQCNSAMQISNIYKQLGKKVSPRDIANKIVE 155

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVL 217
                   N S  +++DK+EVA PGF+NVF+S+ +    +  I  +GV+PP   KKLRV+
Sbjct: 156 --------NVSPHELVDKLEVAGPGFINVFVSKAFGLRNLSTIFTHGVRPPPY-KKLRVV 206

Query: 218 VDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDK 277
           VD SSPNIAKEMHVGHLRSTIIGDTI RLLE+LGHDV+R+NH+GDWGTQFGMLI HLQ+K
Sbjct: 207 VDLSSPNIAKEMHVGHLRSTIIGDTICRLLEFLGHDVLRINHIGDWGTQFGMLIVHLQEK 266

Query: 278 FPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           FPDYL+K+PPI+DLQAFYKESKKRFDEDE FKKRAY  VV LQ  DP+Y KAW++ICDVS
Sbjct: 267 FPDYLSKAPPISDLQAFYKESKKRFDEDEDFKKRAYAGVVKLQSGDPNYIKAWQLICDVS 326

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-DRGSIPM 396
           R++FQ IYDRL+V L ERGESFYQ  M  +V  LE  G LE D+GRK+MWG+ + G+IP 
Sbjct: 327 RKEFQVIYDRLDVKLIERGESFYQSRMNDIVKELEAGGYLEDDEGRKVMWGDKNDGNIPF 386

Query: 397 TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           T+VKSDGG+TYDTSDLA I+QRI EEK DW++YVTD
Sbjct: 387 TVVKSDGGYTYDTSDLATIKQRIVEEKGDWLIYVTD 422



 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/375 (58%), Positives = 275/375 (73%), Gaps = 20/375 (5%)

Query: 1076 KQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNE 1135
            K+ I+S   SQT   + +M        ++++ L ++F  A+  A P++ D    +  +N 
Sbjct: 67   KRAIASLSHSQTSRDSTRMQ-------NIQEILDEIFGAAISSACPDITDAPVVITLSNN 119

Query: 1136 KYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEV 1195
                KFGD+QCN AM +  I+K  G+K +P DIA  I          N S  +++DK+EV
Sbjct: 120  A---KFGDYQCNSAMQISNIYKQLGKKVSPRDIANKIVE--------NVSPHELVDKLEV 168

Query: 1196 AKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            A PGF+NVF+S+ +    +  I  +GV+PP   KKLRV+VD SSPNIAKEMHVGHLRSTI
Sbjct: 169  AGPGFINVFVSKAFGLRNLSTIFTHGVRPPPY-KKLRVVVDLSSPNIAKEMHVGHLRSTI 227

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGDTI RLLE+LGHDV+R+NH+GDWGTQFGMLI HLQ+KFPDYL+K+PPI+DLQAFYKES
Sbjct: 228  IGDTICRLLEFLGHDVLRINHIGDWGTQFGMLIVHLQEKFPDYLSKAPPISDLQAFYKES 287

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 1375
            KKRFDEDE FKKRAY  VV LQ  DP+Y KAW++ICDVSR++FQ IYDRL+V L ERGES
Sbjct: 288  KKRFDEDEDFKKRAYAGVVKLQSGDPNYIKAWQLICDVSRKEFQVIYDRLDVKLIERGES 347

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-DRGSIPMTIVKSDGGFTYDTSDLAAIRQ 1434
            FYQ  M  +V  LE  G LE D+GRK+MWG+ + G+IP T+VKSDGG+TYDTSDLA I+Q
Sbjct: 348  FYQSRMNDIVKELEAGGYLEDDEGRKVMWGDKNDGNIPFTVVKSDGGYTYDTSDLATIKQ 407

Query: 1435 RIEEEKADWIVYVTD 1449
            RI EEK DW++YVTD
Sbjct: 408  RIVEEKGDWLIYVTD 422


>gi|118790236|ref|XP_318119.3| AGAP004708-PA [Anopheles gambiae str. PEST]
 gi|116122419|gb|EAA13294.3| AGAP004708-PA [Anopheles gambiae str. PEST]
          Length = 663

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/594 (60%), Positives = 464/594 (78%), Gaps = 15/594 (2%)

Query: 476  SVRDYLSDVFTHAVQVAFPE-LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            S+   L  VFT A+Q AFP  L +   +++S+      KFGD+QCN AM + +  K    
Sbjct: 78   SIVGELQQVFTEAIQKAFPSVLVEAVITISSSP-----KFGDYQCNSAMQIAQHLKQLSV 132

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K +P ++AQ + + +   +         +D++E+A  G+VN+FLSR Y  ++I  I+ +G
Sbjct: 133  KSSPREVAQKLVAELQKPIPC-------VDRLEIAGAGYVNIFLSRSYGEQRIMSILRHG 185

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            +  P + KK RV+VDFSSPN+AKEMHVGHLRSTIIGD+I R LEYLGHDV+R+NH+GDWG
Sbjct: 186  IVVPLIEKK-RVIVDFSSPNVAKEMHVGHLRSTIIGDSICRFLEYLGHDVLRINHIGDWG 244

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHLQD+FP++ T+SPPI+DLQAFYKESK RFD DE+FKKRAY+CVV LQ  + 
Sbjct: 245  TQFGMLIAHLQDRFPNFQTESPPISDLQAFYKESKVRFDSDEVFKKRAYECVVKLQSGEL 304

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
             Y KAW +ICDVSR++FQ IY+RL+V L ERGESFYQ  ME++V  L++ G LE D+GR 
Sbjct: 305  SYLKAWNLICDVSRKEFQTIYNRLDVKLVERGESFYQSRMEKIVEELKQDGFLEEDEGRL 364

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            IMWGE+R  IP+TIVKSDGGFTYDTSD+AAI+QR++EEKADW++YVTD GQ  HF+ +  
Sbjct: 365  IMWGENRAGIPLTIVKSDGGFTYDTSDMAAIKQRLQEEKADWLIYVTDAGQATHFQTIFS 424

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
            CAK+A IL  +K R+D VGFGVVLGED KKFKTRSGDTVKL+ELL+EGLRR+++KL  K 
Sbjct: 425  CAKRAKILQESKHRVDHVGFGVVLGEDGKKFKTRSGDTVKLTELLNEGLRRAMEKLVQKE 484

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            R+  LT  EL  AQ++VAYGCIKYADLSHNRN +YVFSFDKML+D+GNTAVYLLYAYTRI
Sbjct: 485  RNLVLTQEELVAAQESVAYGCIKYADLSHNRNNEYVFSFDKMLEDKGNTAVYLLYAYTRI 544

Query: 955  ASIARTAGIN-SEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEY 1013
             SIAR  G + + D++    ST + L+HEKE+ LAK LLR  DV++L+ ++L LHHLCE+
Sbjct: 545  RSIARKCGGDFANDMQKVIDSTVIKLDHEKEWKLAKVLLRFTDVMLLIMKNLSLHHLCEF 604

Query: 1014 LYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            +Y+I TAFSEFYD+CYCIEK+ +G+I TV+  R+LL EAT+KV++KCFDIL ++
Sbjct: 605  VYEICTAFSEFYDSCYCIEKNKQGEIITVYPSRVLLCEATSKVLEKCFDILGLK 658



 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/396 (55%), Positives = 286/396 (72%), Gaps = 31/396 (7%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +NT+LKHRL I+Q AI +E        SI+S   G             S+   L  VFT 
Sbjct: 47  ENTRLKHRLEIVQSAIVQE------GGSIASSDSG-----------NQSIVGELQQVFTE 89

Query: 98  AVQVAFPE-LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 156
           A+Q AFP  L +   +++S+      KFGD+QCN AM + +  K    K +P ++AQ + 
Sbjct: 90  AIQKAFPSVLVEAVITISSSP-----KFGDYQCNSAMQIAQHLKQLSVKSSPREVAQKLV 144

Query: 157 SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRV 216
           + +   +         +D++E+A  G+VN+FLSR Y  ++I  I+ +G+  P + KK RV
Sbjct: 145 AELQKPIPC-------VDRLEIAGAGYVNIFLSRSYGEQRIMSILRHGIVVPLIEKK-RV 196

Query: 217 LVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD 276
           +VDFSSPN+AKEMHVGHLRSTIIGD+I R LEYLGHDV+R+NH+GDWGTQFGMLIAHLQD
Sbjct: 197 IVDFSSPNVAKEMHVGHLRSTIIGDSICRFLEYLGHDVLRINHIGDWGTQFGMLIAHLQD 256

Query: 277 KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDV 336
           +FP++ T+SPPI+DLQAFYKESK RFD DE+FKKRAY+CVV LQ  +  Y KAW +ICDV
Sbjct: 257 RFPNFQTESPPISDLQAFYKESKVRFDSDEVFKKRAYECVVKLQSGELSYLKAWNLICDV 316

Query: 337 SRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPM 396
           SR++FQ IY+RL+V L ERGESFYQ  ME++V  L++ G LE D+GR IMWGE+R  IP+
Sbjct: 317 SRKEFQTIYNRLDVKLVERGESFYQSRMEKIVEELKQDGFLEEDEGRLIMWGENRAGIPL 376

Query: 397 TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           TIVKSDGGFTYDTSD+AAI+QR++EEKADW++YVTD
Sbjct: 377 TIVKSDGGFTYDTSDMAAIKQRLQEEKADWLIYVTD 412



 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/348 (58%), Positives = 265/348 (76%), Gaps = 14/348 (4%)

Query: 1103 SVRDYLSDVFTHAVQVAFPE-LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            S+   L  VFT A+Q AFP  L +   +++S+      KFGD+QCN AM + +  K    
Sbjct: 78   SIVGELQQVFTEAIQKAFPSVLVEAVITISSSP-----KFGDYQCNSAMQIAQHLKQLSV 132

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K +P ++AQ + + +   +         +D++E+A  G+VN+FLSR Y  ++I  I+ +G
Sbjct: 133  KSSPREVAQKLVAELQKPIPC-------VDRLEIAGAGYVNIFLSRSYGEQRIMSILRHG 185

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            +  P + KK RV+VDFSSPN+AKEMHVGHLRSTIIGD+I R LEYLGHDV+R+NH+GDWG
Sbjct: 186  IVVPLIEKK-RVIVDFSSPNVAKEMHVGHLRSTIIGDSICRFLEYLGHDVLRINHIGDWG 244

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQD+FP++ T+SPPI+DLQAFYKESK RFD DE+FKKRAY+CVV LQ  + 
Sbjct: 245  TQFGMLIAHLQDRFPNFQTESPPISDLQAFYKESKVRFDSDEVFKKRAYECVVKLQSGEL 304

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
             Y KAW +ICDVSR++FQ IY+RL+V L ERGESFYQ  ME++V  L++ G LE D+GR 
Sbjct: 305  SYLKAWNLICDVSRKEFQTIYNRLDVKLVERGESFYQSRMEKIVEELKQDGFLEEDEGRL 364

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            IMWGE+R  IP+TIVKSDGGFTYDTSD+AAI+QR++EEKADW++YVTD
Sbjct: 365  IMWGENRAGIPLTIVKSDGGFTYDTSDMAAIKQRLQEEKADWLIYVTD 412


>gi|307193340|gb|EFN76202.1| Arginyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 683

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/599 (60%), Positives = 457/599 (76%), Gaps = 16/599 (2%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            D +S+ + L D+F  A+ +A+P++ D    V ++N     KFGD+QCN AM L +     
Sbjct: 92   DVISINNTLCDIFREAIHLAYPDISDPPVIVTTSNNL---KFGDYQCNSAMPLAQHLSSS 148

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
            G K  P ++A +I S +            ++DK E+A PGF+N++L R +    +   + 
Sbjct: 149  GIKVIPRNVANNIISKLEESF--------LVDKYEIAGPGFINIYLKRDFGQYTLNSWLK 200

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
             G  PP   ++ RV+VDFSSPNIAKEMHVGHLRSTIIGD+ISRLLEYLGHDV+R+NH+GD
Sbjct: 201  KGDVPPPCVQRKRVIVDFSSPNIAKEMHVGHLRSTIIGDSISRLLEYLGHDVLRINHIGD 260

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGTQFGMLIAHLQDKFP+Y T +PPI DLQAFYKESK RFD DE FKKRAY+CVV LQ  
Sbjct: 261  WGTQFGMLIAHLQDKFPNYSTVAPPIQDLQAFYKESKTRFDTDENFKKRAYECVVKLQAL 320

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            +P+  KAW+MICDVSR++FQK+Y RL++ + ERGESFYQKHME +V  LE K +LE D+G
Sbjct: 321  EPEITKAWQMICDVSRQEFQKLYTRLDIKIIERGESFYQKHMELVVKKLESKNMLEEDNG 380

Query: 773  RKIMWGEDRGS-IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW---IVYVTDLGQGVH 828
            RKIMWGE R S IP+TIVKSDGGFTYDTSD+AA++QRIE+E+ADW   ++YVTD GQ +H
Sbjct: 381  RKIMWGEKRDSGIPLTIVKSDGGFTYDTSDMAALKQRIEDERADWASILIYVTDAGQSLH 440

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            F++LE C ++AGIL  N  RMD VGFGVVLGED+KKFKTRSGDTVKL ELLDEGL+R+L 
Sbjct: 441  FQMLESCGRRAGILKSNH-RMDHVGFGVVLGEDKKKFKTRSGDTVKLIELLDEGLKRALQ 499

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
            KLK+K R   L+  EL  AQ++VAYGCIKYADL HNRN +Y+FSFDKML+D+GNTAVYLL
Sbjct: 500  KLKEKERDKVLSEEELKMAQESVAYGCIKYADLVHNRNHEYIFSFDKMLEDKGNTAVYLL 559

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YA TRI SIAR A +  ++LR  A  T VSLEHEKE+ LAK LL+  DVL+ +++D+ LH
Sbjct: 560  YALTRIRSIARMANVTQDELRKHAHDTLVSLEHEKEWKLAKVLLKFPDVLLNISQDMYLH 619

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
             LCE+ Y+IS AF+EFYD CYC+EK+  G+I  V+ GRLLL EATA VM KCF +L ++
Sbjct: 620  QLCEFCYEISCAFTEFYDKCYCVEKNQAGEIVKVNMGRLLLTEATAIVMGKCFALLGLK 678



 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/443 (53%), Positives = 312/443 (70%), Gaps = 33/443 (7%)

Query: 24  ISESATED---VLAAQLQNTKLKHRLAILQRAI-AEEEKKQGISSSISSQTKGAAKKMNV 79
           +S+ +T D   V+  Q +N KLKHR+AIL+R I A+  K    S+S+S  ++ +      
Sbjct: 38  VSQESTMDKDEVIKLQQENIKLKHRIAILKRTIEAQRAKVSSDSTSLSVVSQDS------ 91

Query: 80  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 139
              D +S+ + L D+F  A+ +A+P++ D    V ++N     KFGD+QCN AM L +  
Sbjct: 92  ---DVISINNTLCDIFREAIHLAYPDISDPPVIVTTSNNL---KFGDYQCNSAMPLAQHL 145

Query: 140 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 199
              G K  P ++A +I S +            ++DK E+A PGF+N++L R +    +  
Sbjct: 146 SSSGIKVIPRNVANNIISKLEESF--------LVDKYEIAGPGFINIYLKRDFGQYTLNS 197

Query: 200 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
            +  G  PP   ++ RV+VDFSSPNIAKEMHVGHLRSTIIGD+ISRLLEYLGHDV+R+NH
Sbjct: 198 WLKKGDVPPPCVQRKRVIVDFSSPNIAKEMHVGHLRSTIIGDSISRLLEYLGHDVLRINH 257

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           +GDWGTQFGMLIAHLQDKFP+Y T +PPI DLQAFYKESK RFD DE FKKRAY+CVV L
Sbjct: 258 IGDWGTQFGMLIAHLQDKFPNYSTVAPPIQDLQAFYKESKTRFDTDENFKKRAYECVVKL 317

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 379
           Q  +P+  KAW+MICDVSR++FQK+Y RL++ + ERGESFYQKHME +V  LE K +LE 
Sbjct: 318 QALEPEITKAWQMICDVSRQEFQKLYTRLDIKIIERGESFYQKHMELVVKKLESKNMLEE 377

Query: 380 DDGRKIMWGEDRGS-IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW---IVYVTDH-R 434
           D+GRKIMWGE R S IP+TIVKSDGGFTYDTSD+AA++QRIE+E+ADW   ++YVTD  +
Sbjct: 378 DNGRKIMWGEKRDSGIPLTIVKSDGGFTYDTSDMAALKQRIEDERADWASILIYVTDAGQ 437

Query: 435 SYH-QVLQAIAEEEKKQGISSSS 456
           S H Q+L++     ++ GI  S+
Sbjct: 438 SLHFQMLESCG---RRAGILKSN 457



 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/387 (55%), Positives = 277/387 (71%), Gaps = 24/387 (6%)

Query: 1067 RTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDK 1126
            RT  A+  K    S+S+S  ++ +         D +S+ + L D+F  A+ +A+P++ D 
Sbjct: 68   RTIEAQRAKVSSDSTSLSVVSQDS---------DVISINNTLCDIFREAIHLAYPDISDP 118

Query: 1127 TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 1186
               V ++N     KFGD+QCN AM L +     G K  P ++A +I S +          
Sbjct: 119  PVIVTTSNNL---KFGDYQCNSAMPLAQHLSSSGIKVIPRNVANNIISKLEESF------ 169

Query: 1187 AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEM 1246
              ++DK E+A PGF+N++L R +    +   +  G  PP   ++ RV+VDFSSPNIAKEM
Sbjct: 170  --LVDKYEIAGPGFINIYLKRDFGQYTLNSWLKKGDVPPPCVQRKRVIVDFSSPNIAKEM 227

Query: 1247 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 1306
            HVGHLRSTIIGD+ISRLLEYLGHDV+R+NH+GDWGTQFGMLIAHLQDKFP+Y T +PPI 
Sbjct: 228  HVGHLRSTIIGDSISRLLEYLGHDVLRINHIGDWGTQFGMLIAHLQDKFPNYSTVAPPIQ 287

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DLQAFYKESK RFD DE FKKRAY+CVV LQ  +P+  KAW+MICDVSR++FQK+Y RL+
Sbjct: 288  DLQAFYKESKTRFDTDENFKKRAYECVVKLQALEPEITKAWQMICDVSRQEFQKLYTRLD 347

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-IPMTIVKSDGGFTYD 1425
            + + ERGESFYQKHME +V  LE K +LE D+GRKIMWGE R S IP+TIVKSDGGFTYD
Sbjct: 348  IKIIERGESFYQKHMELVVKKLESKNMLEEDNGRKIMWGEKRDSGIPLTIVKSDGGFTYD 407

Query: 1426 TSDLAAIRQRIEEEKADW---IVYVTD 1449
            TSD+AA++QRIE+E+ADW   ++YVTD
Sbjct: 408  TSDMAALKQRIEDERADWASILIYVTD 434


>gi|332030674|gb|EGI70362.1| Arginyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 684

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/602 (60%), Positives = 464/602 (77%), Gaps = 18/602 (2%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            D +S+++ +S VF  A+  A+P++ D    V ++      KFGD+QCN AM L +     
Sbjct: 93   DTISIKNNVSAVFHKAISAAYPDILDPPVIVTTSTNP---KFGDYQCNSAMPLAQQLSSS 149

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
            G K +P D+A+ I S +         ++ VI+K E+A  GF+N++L R +    +++ + 
Sbjct: 150  GFKVSPRDVAKEIMSKL--------KVSSVIEKYEIAGAGFINIYLKREFGQSVLRNWLW 201

Query: 593  NG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
             G V PP + KK RV+VDFSSPNIAKEMHVGHLRSTIIGD+ISRLLEYLGHDV+RLNHVG
Sbjct: 202  AGEVLPPYVKKK-RVVVDFSSPNIAKEMHVGHLRSTIIGDSISRLLEYLGHDVLRLNHVG 260

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIAHLQDKFP+YLT +PPI DLQ FYKESK RFDEDE FKKRAY+CVV LQ 
Sbjct: 261  DWGTQFGMLIAHLQDKFPNYLTITPPIEDLQTFYKESKTRFDEDEEFKKRAYECVVKLQA 320

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
            F+P+  KAW+MICDVSR++F+K+Y RL++ L ERGESFYQK+ME ++  LE K +LE D+
Sbjct: 321  FEPNMTKAWKMICDVSRQEFEKVYTRLDIKLIERGESFYQKYMESIIQELESKNMLEEDN 380

Query: 772  GRKIMWGEDRGS-IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW---IVYVTDLGQGV 827
            GRKIMWGE  GS +P+TIVKSDGGFTYDTSD+A I+ RIE+E+ADW   ++YVTD GQ +
Sbjct: 381  GRKIMWGEKHGSGVPLTIVKSDGGFTYDTSDMACIKYRIEKERADWASILIYVTDAGQSL 440

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF++++ CAK+AGIL     RMD VGFG VLGED+KKFKTRSGDTVKLSELLDEGL+R+L
Sbjct: 441  HFQIIKSCAKRAGILKSFH-RMDHVGFGAVLGEDKKKFKTRSGDTVKLSELLDEGLKRAL 499

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
             KLK+K R   L+  EL  AQ++VAYGCIKYADL HNRN +YVFSFDKML+D+GNTAVYL
Sbjct: 500  QKLKEKERDKVLSQEELKAAQESVAYGCIKYADLLHNRNHEYVFSFDKMLEDKGNTAVYL 559

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA TRI SIARTA I  ++LR  +   P+SLEHEKE+ LAK LL+  DV++ VT DL L
Sbjct: 560  LYALTRIRSIARTANITKDELRQRSHEVPISLEHEKEWKLAKVLLKFPDVILGVTEDLYL 619

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            + LCE+ Y++S AF+EFYD CYC+EKD  G+I  ++ GRLLL EATA +++KCF +L ++
Sbjct: 620  NPLCEFCYEVSCAFTEFYDKCYCVEKDQSGEIVKINMGRLLLMEATALILEKCFSLLGLK 679

Query: 1068 TA 1069
            + 
Sbjct: 680  SV 681



 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/451 (52%), Positives = 311/451 (68%), Gaps = 40/451 (8%)

Query: 17  ELSTKGFISESAT----EDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKG 72
           EL  + F+++  +    E+    Q +N KL HR+ IL+R             ++  Q   
Sbjct: 35  ELLQRSFMTDIPSNITKEEFENLQQENAKLTHRITILKR-------------TVEMQRDK 81

Query: 73  AAKKMNV-PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCND 131
              KM +    D +S+++ +S VF  A+  A+P++ D    V ++      KFGD+QCN 
Sbjct: 82  LDNKMGLFGTADTISIKNNVSAVFHKAISAAYPDILDPPVIVTTSTNP---KFGDYQCNS 138

Query: 132 AMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRV 191
           AM L +     G K +P D+A+ I S +         ++ VI+K E+A  GF+N++L R 
Sbjct: 139 AMPLAQQLSSSGFKVSPRDVAKEIMSKL--------KVSSVIEKYEIAGAGFINIYLKRE 190

Query: 192 YAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 250
           +    +++ +  G V PP + KK RV+VDFSSPNIAKEMHVGHLRSTIIGD+ISRLLEYL
Sbjct: 191 FGQSVLRNWLWAGEVLPPYVKKK-RVVVDFSSPNIAKEMHVGHLRSTIIGDSISRLLEYL 249

Query: 251 GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 310
           GHDV+RLNHVGDWGTQFGMLIAHLQDKFP+YLT +PPI DLQ FYKESK RFDEDE FKK
Sbjct: 250 GHDVLRLNHVGDWGTQFGMLIAHLQDKFPNYLTITPPIEDLQTFYKESKTRFDEDEEFKK 309

Query: 311 RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 370
           RAY+CVV LQ F+P+  KAW+MICDVSR++F+K+Y RL++ L ERGESFYQK+ME ++  
Sbjct: 310 RAYECVVKLQAFEPNMTKAWKMICDVSRQEFEKVYTRLDIKLIERGESFYQKYMESIIQE 369

Query: 371 LEKKGLLELDDGRKIMWGEDRGS-IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW--- 426
           LE K +LE D+GRKIMWGE  GS +P+TIVKSDGGFTYDTSD+A I+ RIE+E+ADW   
Sbjct: 370 LESKNMLEEDNGRKIMWGEKHGSGVPLTIVKSDGGFTYDTSDMACIKYRIEKERADWASI 429

Query: 427 IVYVTDH-RSYH-QVLQAIAEEEKKQGISSS 455
           ++YVTD  +S H Q++++ A   K+ GI  S
Sbjct: 430 LIYVTDAGQSLHFQIIKSCA---KRAGILKS 457



 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/355 (59%), Positives = 269/355 (75%), Gaps = 17/355 (4%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            D +S+++ +S VF  A+  A+P++ D    V ++      KFGD+QCN AM L +     
Sbjct: 93   DTISIKNNVSAVFHKAISAAYPDILDPPVIVTTSTNP---KFGDYQCNSAMPLAQQLSSS 149

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
            G K +P D+A+ I S +         ++ VI+K E+A  GF+N++L R +    +++ + 
Sbjct: 150  GFKVSPRDVAKEIMSKL--------KVSSVIEKYEIAGAGFINIYLKREFGQSVLRNWLW 201

Query: 1220 NG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
             G V PP + KK RV+VDFSSPNIAKEMHVGHLRSTIIGD+ISRLLEYLGHDV+RLNHVG
Sbjct: 202  AGEVLPPYVKKK-RVVVDFSSPNIAKEMHVGHLRSTIIGDSISRLLEYLGHDVLRLNHVG 260

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIAHLQDKFP+YLT +PPI DLQ FYKESK RFDEDE FKKRAY+CVV LQ 
Sbjct: 261  DWGTQFGMLIAHLQDKFPNYLTITPPIEDLQTFYKESKTRFDEDEEFKKRAYECVVKLQA 320

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
            F+P+  KAW+MICDVSR++F+K+Y RL++ L ERGESFYQK+ME ++  LE K +LE D+
Sbjct: 321  FEPNMTKAWKMICDVSRQEFEKVYTRLDIKLIERGESFYQKYMESIIQELESKNMLEEDN 380

Query: 1399 GRKIMWGEDRGS-IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW---IVYVTD 1449
            GRKIMWGE  GS +P+TIVKSDGGFTYDTSD+A I+ RIE+E+ADW   ++YVTD
Sbjct: 381  GRKIMWGEKHGSGVPLTIVKSDGGFTYDTSDMACIKYRIEKERADWASILIYVTD 435


>gi|345490499|ref|XP_001604592.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Nasonia
            vitripennis]
          Length = 676

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/634 (55%), Positives = 478/634 (75%), Gaps = 27/634 (4%)

Query: 438  QVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELG 497
            ++L+   EE K + ++ S++    G            +S+ D L  +F  A+  A+P+L 
Sbjct: 61   EILKKTLEERKSKHLAVSTNMSESG----------HMVSIYDTLYTLFEKAIIEAYPDLT 110

Query: 498  DKTASVASTNEKYVHKFGDFQCNDAMALCKIF--KDKGEKKNPFDIAQSIASVVTSELAT 555
            D    ++S+N     KFGD+QCN A+ LCK+     +G+K +P +IA  I      ++A+
Sbjct: 111  DPPVVISSSNNP---KFGDYQCNSALPLCKLLGSASQGKKVSPREIADKI----ILKVAS 163

Query: 556  NPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG--VQPPTLNKKLRVLVDFSSP 613
            +P    +++K+EVA  GF+N++L R +    + +I+ +G  + PP + K+ R+LVDFSSP
Sbjct: 164  SP----LVEKLEVAGAGFINIYLKREFGQAILANILKHGKVLSPPVVQKR-RILVDFSSP 218

Query: 614  NIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLT 673
            N+AKEMHVGHLRSTIIGD+I+RLLE+LGHDV+R+NH+GDWGTQFGMLIAHL+DKFP+Y T
Sbjct: 219  NVAKEMHVGHLRSTIIGDSIARLLEFLGHDVLRINHIGDWGTQFGMLIAHLEDKFPNYTT 278

Query: 674  KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQK 733
            +SPPI+DLQ+FYKESK RFDEDE FKKRAY CVV LQ  +P Y +AW++ICDVSR++FQ 
Sbjct: 279  ESPPISDLQSFYKESKVRFDEDEEFKKRAYACVVKLQAHEPKYIQAWKLICDVSRKEFQS 338

Query: 734  IYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDG 793
            IY+RL++ L ERGESFY   M+ +V  LE+K  LE D+GRKIMWGE+R  IP+TIVK DG
Sbjct: 339  IYNRLDIKLIERGESFYHSRMKDIVKELEEKNFLEEDEGRKIMWGENREGIPLTIVKRDG 398

Query: 794  GFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
            GFTYDTSD+AAI+ RI EEKA+W++YV D GQ  HF+++E CA++A I+      +DFVG
Sbjct: 399  GFTYDTSDMAAIKHRIVEEKAEWVIYVVDAGQATHFQIMESCARRARIVLSCHN-IDFVG 457

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAY 913
            FGVVLGED+KKFKTRSGDTVKLS+LLDEGL+R+  KL +K R   LT  E ++A++++AY
Sbjct: 458  FGVVLGEDKKKFKTRSGDTVKLSQLLDEGLKRAEQKLMEKERDKVLTKEEFNKAKESIAY 517

Query: 914  GCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQ 973
            GCIKYADL HNRN DYVFSFDKM +D+GNTAVYLLYA TRI SIARTA ++ E+++ A  
Sbjct: 518  GCIKYADLCHNRNHDYVFSFDKMTEDKGNTAVYLLYALTRIRSIARTANVSREEMQEAIG 577

Query: 974  STPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK 1033
             TP+SLEHEKE+ LAK LL+  DV++ +T+DLCLH LCE  Y+I+ AF+EFYDNCYC+EK
Sbjct: 578  KTPISLEHEKEWKLAKVLLKFPDVILKITKDLCLHTLCELCYEIACAFTEFYDNCYCVEK 637

Query: 1034 DAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            +  G+I  V+ GR+LL E TA ++++CF +L ++
Sbjct: 638  NQTGEIVKVNMGRILLTEVTAMMLEQCFALLGLK 671



 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/413 (52%), Positives = 299/413 (72%), Gaps = 29/413 (7%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N KLK R+ IL++ + EE K + ++ S +    G            +S+ D L  +F  
Sbjct: 52  ENEKLKMRIEILKKTL-EERKSKHLAVSTNMSESGHM----------VSIYDTLYTLFEK 100

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF--KDKGEKKNPFDIAQSI 155
           A+  A+P+L D    ++S+N     KFGD+QCN A+ LCK+     +G+K +P +IA  I
Sbjct: 101 AIIEAYPDLTDPPVVISSSNNP---KFGDYQCNSALPLCKLLGSASQGKKVSPREIADKI 157

Query: 156 ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG--VQPPTLNKK 213
                 ++A++P    +++K+EVA  GF+N++L R +    + +I+ +G  + PP + K+
Sbjct: 158 ----ILKVASSP----LVEKLEVAGAGFINIYLKREFGQAILANILKHGKVLSPPVVQKR 209

Query: 214 LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAH 273
            R+LVDFSSPN+AKEMHVGHLRSTIIGD+I+RLLE+LGHDV+R+NH+GDWGTQFGMLIAH
Sbjct: 210 -RILVDFSSPNVAKEMHVGHLRSTIIGDSIARLLEFLGHDVLRINHIGDWGTQFGMLIAH 268

Query: 274 LQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMI 333
           L+DKFP+Y T+SPPI+DLQ+FYKESK RFDEDE FKKRAY CVV LQ  +P Y +AW++I
Sbjct: 269 LEDKFPNYTTESPPISDLQSFYKESKVRFDEDEEFKKRAYACVVKLQAHEPKYIQAWKLI 328

Query: 334 CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 393
           CDVSR++FQ IY+RL++ L ERGESFY   M+ +V  LE+K  LE D+GRKIMWGE+R  
Sbjct: 329 CDVSRKEFQSIYNRLDIKLIERGESFYHSRMKDIVKELEEKNFLEEDEGRKIMWGENREG 388

Query: 394 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIA 444
           IP+TIVK DGGFTYDTSD+AAI+ RI EEKA+W++YV D    ++ Q++++ A
Sbjct: 389 IPLTIVKRDGGFTYDTSDMAAIKHRIVEEKAEWVIYVVDAGQATHFQIMESCA 441



 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/363 (55%), Positives = 276/363 (76%), Gaps = 18/363 (4%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF--KDK 1159
            +S+ D L  +F  A+  A+P+L D    ++S+N     KFGD+QCN A+ LCK+     +
Sbjct: 88   VSIYDTLYTLFEKAIIEAYPDLTDPPVVISSSNNP---KFGDYQCNSALPLCKLLGSASQ 144

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
            G+K +P +IA  I      ++A++P    +++K+EVA  GF+N++L R +    + +I+ 
Sbjct: 145  GKKVSPREIADKI----ILKVASSP----LVEKLEVAGAGFINIYLKREFGQAILANILK 196

Query: 1220 NG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
            +G  + PP + K+ R+LVDFSSPN+AKEMHVGHLRSTIIGD+I+RLLE+LGHDV+R+NH+
Sbjct: 197  HGKVLSPPVVQKR-RILVDFSSPNVAKEMHVGHLRSTIIGDSIARLLEFLGHDVLRINHI 255

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLIAHL+DKFP+Y T+SPPI+DLQ+FYKESK RFDEDE FKKRAY CVV LQ
Sbjct: 256  GDWGTQFGMLIAHLEDKFPNYTTESPPISDLQSFYKESKVRFDEDEEFKKRAYACVVKLQ 315

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              +P Y +AW++ICDVSR++FQ IY+RL++ L ERGESFY   M+ +V  LE+K  LE D
Sbjct: 316  AHEPKYIQAWKLICDVSRKEFQSIYNRLDIKLIERGESFYHSRMKDIVKELEEKNFLEED 375

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQ 1455
            +GRKIMWGE+R  IP+TIVK DGGFTYDTSD+AAI+ RI EEKA+W++YV D    ++ Q
Sbjct: 376  EGRKIMWGENREGIPLTIVKRDGGFTYDTSDMAAIKHRIVEEKAEWVIYVVDAGQATHFQ 435

Query: 1456 VLQ 1458
            +++
Sbjct: 436  IME 438


>gi|194745067|ref|XP_001955014.1| GF16459 [Drosophila ananassae]
 gi|190628051|gb|EDV43575.1| GF16459 [Drosophila ananassae]
          Length = 666

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/628 (57%), Positives = 466/628 (74%), Gaps = 27/628 (4%)

Query: 441  QAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKT 500
            Q+IAEE K  G                ++ V++  S+ ++L  VF  A+ +AFPE  D  
Sbjct: 60   QSIAEESKAGG----------------SIEVQENSSITEHLHFVFAQAIALAFPEYKDTP 103

Query: 501  ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 560
             S+A  N     KFGD+QCN+AM L K  K+KG  K+P DIA        +E+  N  ++
Sbjct: 104  VSIAPVNSASA-KFGDYQCNNAMKLAKQLKEKGINKSPGDIA--------TEIQRNCPVS 154

Query: 561  KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
             +I+K+EVA  GFVNVFLS+ YA + +  ++ NGV+PP + K+ RVL+DFSSPNIAK+MH
Sbjct: 155  PLIEKLEVAGAGFVNVFLSKNYASQALSGLLRNGVKPPPVPKR-RVLIDFSSPNIAKQMH 213

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
            VGHLRSTIIG++I RLLE+L HDVVR+NH+GDWGTQFGMLIAHL+D+FP++L +SPPI D
Sbjct: 214  VGHLRSTIIGESICRLLEFLQHDVVRINHLGDWGTQFGMLIAHLEDRFPNFLNESPPIGD 273

Query: 681  LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 740
            LQ FYKESKKRFDEDE FKKRAY  VV+LQ  +P+  KAW++ICDVSR++FQ IY+RL+V
Sbjct: 274  LQVFYKESKKRFDEDEEFKKRAYSRVVSLQSGEPNSIKAWQLICDVSRKEFQTIYNRLDV 333

Query: 741  TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-GEDRGSIPMTIVKSDGGFTYDT 799
            ++ ERGESFYQ  M  +V +L KK LLE D+GR+IMW  E +  IP+TIVKSDGGFTYDT
Sbjct: 334  SIQERGESFYQSRMLSVVEFLRKKNLLEPDEGREIMWPDESKTGIPLTIVKSDGGFTYDT 393

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            SD+AAIR R+EEEK  WI+YV D GQ  HF  + + A++ GIL+    R+D V FGVVLG
Sbjct: 394  SDMAAIRHRLEEEKCSWIIYVVDAGQSTHFNTIFKAAERCGILDRAVHRVDHVQFGVVLG 453

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            ED KKFKTRSGDTVKLS+LLDEG++RSL++L+ + R+  LTP EL +AQ+AVAY CIKYA
Sbjct: 454  EDGKKFKTRSGDTVKLSDLLDEGMKRSLNQLESRGRNDVLTPQELKDAQEAVAYSCIKYA 513

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DL HNR  DY+FSFDKML+DRGNTAVYLLY YTRI SIAR +G +  DL    +   + L
Sbjct: 514  DLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSGEDFSDLAKVLEGVNIDL 573

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
             HEKE+ LAKTLL+M+D+L+  + +L LH LCE+ Y++ T F+EFYD+CYCIEK+  G+I
Sbjct: 574  SHEKEWKLAKTLLKMHDILIKCSNELFLHFLCEFCYEVCTVFTEFYDSCYCIEKNKAGEI 633

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIR 1067
              V+  R+LL EATA V+++ F IL ++
Sbjct: 634  IAVNRSRILLCEATAAVLRQSFFILGLK 661



 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/404 (57%), Positives = 300/404 (74%), Gaps = 27/404 (6%)

Query: 30  EDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRD 89
           +D+L  Q++NTKLKHRLAIL+++IAEE K  G                ++ V++  S+ +
Sbjct: 39  DDLLKLQVENTKLKHRLAILRQSIAEESKAGG----------------SIEVQENSSITE 82

Query: 90  YLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 149
           +L  VF  A+ +AFPE  D   S+A  N     KFGD+QCN+AM L K  K+KG  K+P 
Sbjct: 83  HLHFVFAQAIALAFPEYKDTPVSIAPVNSASA-KFGDYQCNNAMKLAKQLKEKGINKSPG 141

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 209
           DIA        +E+  N  ++ +I+K+EVA  GFVNVFLS+ YA + +  ++ NGV+PP 
Sbjct: 142 DIA--------TEIQRNCPVSPLIEKLEVAGAGFVNVFLSKNYASQALSGLLRNGVKPPP 193

Query: 210 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
           + K+ RVL+DFSSPNIAK+MHVGHLRSTIIG++I RLLE+L HDVVR+NH+GDWGTQFGM
Sbjct: 194 VPKR-RVLIDFSSPNIAKQMHVGHLRSTIIGESICRLLEFLQHDVVRINHLGDWGTQFGM 252

Query: 270 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 329
           LIAHL+D+FP++L +SPPI DLQ FYKESKKRFDEDE FKKRAY  VV+LQ  +P+  KA
Sbjct: 253 LIAHLEDRFPNFLNESPPIGDLQVFYKESKKRFDEDEEFKKRAYSRVVSLQSGEPNSIKA 312

Query: 330 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-G 388
           W++ICDVSR++FQ IY+RL+V++ ERGESFYQ  M  +V +L KK LLE D+GR+IMW  
Sbjct: 313 WQLICDVSRKEFQTIYNRLDVSIQERGESFYQSRMLSVVEFLRKKNLLEPDEGREIMWPD 372

Query: 389 EDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           E +  IP+TIVKSDGGFTYDTSD+AAIR R+EEEK  WI+YV D
Sbjct: 373 ESKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEEKCSWIIYVVD 416



 Score =  448 bits (1152), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/385 (56%), Positives = 282/385 (73%), Gaps = 27/385 (7%)

Query: 1066 IRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGD 1125
            +R +IAEE K  G                ++ V++  S+ ++L  VF  A+ +AFPE  D
Sbjct: 58   LRQSIAEESKAGG----------------SIEVQENSSITEHLHFVFAQAIALAFPEYKD 101

Query: 1126 KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 1185
               S+A  N     KFGD+QCN+AM L K  K+KG  K+P DIA        +E+  N  
Sbjct: 102  TPVSIAPVNSASA-KFGDYQCNNAMKLAKQLKEKGINKSPGDIA--------TEIQRNCP 152

Query: 1186 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 1245
            ++ +I+K+EVA  GFVNVFLS+ YA + +  ++ NGV+PP + K+ RVL+DFSSPNIAK+
Sbjct: 153  VSPLIEKLEVAGAGFVNVFLSKNYASQALSGLLRNGVKPPPVPKR-RVLIDFSSPNIAKQ 211

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRSTIIG++I RLLE+L HDVVR+NH+GDWGTQFGMLIAHL+D+FP++L +SPPI
Sbjct: 212  MHVGHLRSTIIGESICRLLEFLQHDVVRINHLGDWGTQFGMLIAHLEDRFPNFLNESPPI 271

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
             DLQ FYKESKKRFDEDE FKKRAY  VV+LQ  +P+  KAW++ICDVSR++FQ IY+RL
Sbjct: 272  GDLQVFYKESKKRFDEDEEFKKRAYSRVVSLQSGEPNSIKAWQLICDVSRKEFQTIYNRL 331

Query: 1366 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-GEDRGSIPMTIVKSDGGFTY 1424
            +V++ ERGESFYQ  M  +V +L KK LLE D+GR+IMW  E +  IP+TIVKSDGGFTY
Sbjct: 332  DVSIQERGESFYQSRMLSVVEFLRKKNLLEPDEGREIMWPDESKTGIPLTIVKSDGGFTY 391

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTD 1449
            DTSD+AAIR R+EEEK  WI+YV D
Sbjct: 392  DTSDMAAIRHRLEEEKCSWIIYVVD 416


>gi|348533015|ref|XP_003454001.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Oreochromis
            niloticus]
          Length = 661

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/593 (59%), Positives = 459/593 (77%), Gaps = 13/593 (2%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +++   L +VF  A++ + PEL +   S+A + +    KFGD+QCN AM++ ++ K KG 
Sbjct: 75   LNINQRLQEVFGEAIRASCPELDNPPLSIAPSQQA---KFGDYQCNSAMSMSQMLKAKGT 131

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K NP +IA+ I       L  N    +++ K EVA PGF+N++L + +  +Q+ ++++NG
Sbjct: 132  KMNPREIAEKI----IKNLPDN----ELVQKTEVAGPGFINIYLQKTFVSKQLSNLLING 183

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            VQPP L  K +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG++V+RLNHVGDWG
Sbjct: 184  VQPPPLPSKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWG 243

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHLQD FPDYLT SPPI+DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 244  TQFGMLIAHLQDMFPDYLTVSPPISDLQAFYKESKKRFDTEEEFKKRAYQCVVKLQSKEP 303

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            ++ K W +ICDVSR++FQKIYD L++ L ERGES+YQ  M ++V   EKKGL+ELD+GRK
Sbjct: 304  EFIKGWNLICDVSRKEFQKIYDCLDIKLIERGESYYQDLMVEVVKEFEKKGLVELDEGRK 363

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            +++  ++  IP+TIVKSDGG+TYDTSDLAAIRQRI EEKAD I+YVTD GQ  HF+++  
Sbjct: 364  VVFPPEQ-PIPLTIVKSDGGYTYDTSDLAAIRQRIFEEKADIIIYVTDSGQSTHFQVVFA 422

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A+  G  NP  TR++  GFGVVLGED+KKFKTRSGDTV+L +LLDEGL+RS+DKLK+K 
Sbjct: 423  AAQLIGWYNPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLDEGLKRSMDKLKEKE 482

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            R   LTP EL++AQ+AVA+GCIKYADLSHNRN DYVFSFDKMLDDRGNTA YLLYA+TRI
Sbjct: 483  RDKVLTPEELTKAQRAVAFGCIKYADLSHNRNNDYVFSFDKMLDDRGNTAAYLLYAFTRI 542

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
             SI R A I+   L+ AA++T + L+HEKE+ L K + R  ++L  +  DL LH LC+YL
Sbjct: 543  RSITRLAKIDEATLKKAAETTEILLDHEKEWKLGKCIQRFPEILQKILDDLLLHTLCDYL 602

Query: 1015 YDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            Y+++T F+EFYD+CYC+EKD + G++  ++  R+LL EATA +M K FDIL +
Sbjct: 603  YELATTFTEFYDSCYCVEKDRQTGEVIKINMWRMLLCEATAAIMAKGFDILGL 655



 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/444 (51%), Positives = 314/444 (70%), Gaps = 35/444 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E +++   +++  L     +S S   + L  Q +N +LK+RL IL++++ EE       
Sbjct: 15  QEQEIQRLSAEIKNLENSQNLSPSPRLEEL--QEENARLKYRLNILKKSLQEE------- 65

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
            S+S + K             +++   L +VF  A++ + PEL +   S+A + +    K
Sbjct: 66  -SLSHRGKAM-----------LNINQRLQEVFGEAIRASCPELDNPPLSIAPSQQA---K 110

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM++ ++ K KG K NP +IA+ I       L  N    +++ K EVA PGF
Sbjct: 111 FGDYQCNSAMSMSQMLKAKGTKMNPREIAEKI----IKNLPDN----ELVQKTEVAGPGF 162

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N++L + +  +Q+ ++++NGVQPP L  K +V+VDFSSPNIAKEMHVGHLRSTIIGD++
Sbjct: 163 INIYLQKTFVSKQLSNLLINGVQPPPLPSKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSM 222

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+LG++V+RLNHVGDWGTQFGMLIAHLQD FPDYLT SPPI+DLQAFYKESKKRFD
Sbjct: 223 CRLFEFLGYEVLRLNHVGDWGTQFGMLIAHLQDMFPDYLTVSPPISDLQAFYKESKKRFD 282

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +P++ K W +ICDVSR++FQKIYD L++ L ERGES+YQ  
Sbjct: 283 TEEEFKKRAYQCVVKLQSKEPEFIKGWNLICDVSRKEFQKIYDCLDIKLIERGESYYQDL 342

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M ++V   EKKGL+ELD+GRK+++  ++  IP+TIVKSDGG+TYDTSDLAAIRQRI EEK
Sbjct: 343 MVEVVKEFEKKGLVELDEGRKVVFPPEQ-PIPLTIVKSDGGYTYDTSDLAAIRQRIFEEK 401

Query: 424 ADWIVYVTD--HRSYHQVLQAIAE 445
           AD I+YVTD    ++ QV+ A A+
Sbjct: 402 ADIIIYVTDSGQSTHFQVVFAAAQ 425



 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/348 (59%), Positives = 270/348 (77%), Gaps = 12/348 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +++   L +VF  A++ + PEL +   S+A + +    KFGD+QCN AM++ ++ K KG 
Sbjct: 75   LNINQRLQEVFGEAIRASCPELDNPPLSIAPSQQA---KFGDYQCNSAMSMSQMLKAKGT 131

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K NP +IA+ I       L  N    +++ K EVA PGF+N++L + +  +Q+ ++++NG
Sbjct: 132  KMNPREIAEKI----IKNLPDN----ELVQKTEVAGPGFINIYLQKTFVSKQLSNLLING 183

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            VQPP L  K +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG++V+RLNHVGDWG
Sbjct: 184  VQPPPLPSKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWG 243

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQD FPDYLT SPPI+DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 244  TQFGMLIAHLQDMFPDYLTVSPPISDLQAFYKESKKRFDTEEEFKKRAYQCVVKLQSKEP 303

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            ++ K W +ICDVSR++FQKIYD L++ L ERGES+YQ  M ++V   EKKGL+ELD+GRK
Sbjct: 304  EFIKGWNLICDVSRKEFQKIYDCLDIKLIERGESYYQDLMVEVVKEFEKKGLVELDEGRK 363

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +++  ++  IP+TIVKSDGG+TYDTSDLAAIRQRI EEKAD I+YVTD
Sbjct: 364  VVFPPEQ-PIPLTIVKSDGGYTYDTSDLAAIRQRIFEEKADIIIYVTD 410


>gi|195479011|ref|XP_002100732.1| GE16015 [Drosophila yakuba]
 gi|194188256|gb|EDX01840.1| GE16015 [Drosophila yakuba]
          Length = 664

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/616 (57%), Positives = 462/616 (75%), Gaps = 15/616 (2%)

Query: 453  SSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH 512
            S +  S   G A K+    +D  S+ ++L  VF  A+  AFPE  D    +A  N     
Sbjct: 58   SIAEESNAGGGAAKL----KDSSSITEHLESVFGQAIASAFPEFRDTPVIIAPVNSTSA- 112

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+QCN+AM L K  K+KG  K P DIA        +EL  +   + +I+K+E+A  G
Sbjct: 113  KFGDYQCNNAMGLSKKLKEKGISKAPRDIA--------TELKGHCPPSPLIEKLEIAGAG 164

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            FVNVFLS+ YA   + +++ NGV PP +NK+ RVLVDFSSPNIAK+MHVGHLRSTIIG++
Sbjct: 165  FVNVFLSKDYAASALSNLLRNGVSPPEVNKR-RVLVDFSSPNIAKQMHVGHLRSTIIGES 223

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRF
Sbjct: 224  LCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRF 283

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 752
            DEDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ 
Sbjct: 284  DEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISIKERGESFYQS 343

Query: 753  HMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 811
             M  +V YL  KGLLE D+GR+IMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+EE
Sbjct: 344  RMLSVVEYLRGKGLLEADEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRVEE 403

Query: 812  EKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGD 871
            E  DWI+YV D GQ  HF  + + A+++ ILNP   R+D V FGVVLGED KKFKTRSGD
Sbjct: 404  ELCDWIIYVVDSGQSTHFNTIFKAAERSAILNPLTHRVDHVQFGVVLGEDGKKFKTRSGD 463

Query: 872  TVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVF 931
            TVKL++LLDEG++RSL +L+ + R   LTP EL +AQ+++AYGCIKY+DL HNR  DY+F
Sbjct: 464  TVKLADLLDEGMKRSLLQLESRGRDKVLTPQELKDAQESLAYGCIKYSDLCHNRISDYIF 523

Query: 932  SFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTL 991
            SFDKML+DRGNTAVYLLY YTRI SIAR  G +  +L    + T + L HEKE+ LAKTL
Sbjct: 524  SFDKMLEDRGNTAVYLLYTYTRICSIARNCGEDFSNLPEILKKTNIVLAHEKEWKLAKTL 583

Query: 992  LRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAE 1051
            L+++D+L+  +R+L LH LCE+ +++ T F+EFYD+CYCIEK+ +G I  V+  R+LL E
Sbjct: 584  LKLHDILIKCSRELFLHFLCEFCFEVCTVFTEFYDSCYCIEKNKQGDIIAVNHSRILLCE 643

Query: 1052 ATAKVMKKCFDILNIR 1067
            ATA V+++CF IL ++
Sbjct: 644  ATAAVLRQCFYILGLK 659



 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/425 (55%), Positives = 303/425 (71%), Gaps = 34/425 (8%)

Query: 17  ELSTKGFISESATE--------DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISS 68
           EL T+G  +   T         D++  Q++N KLK+RL IL+++IAEE    G       
Sbjct: 15  ELKTQGLAARIQTAKNGEQLDVDLVQLQIENKKLKNRLFILKKSIAEESNAGG------- 67

Query: 69  QTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQ 128
              GAAK     ++D  S+ ++L  VF  A+  AFPE  D    +A  N     KFGD+Q
Sbjct: 68  ---GAAK-----LKDSSSITEHLESVFGQAIASAFPEFRDTPVIIAPVNSTSA-KFGDYQ 118

Query: 129 CNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL 188
           CN+AM L K  K+KG  K P DIA        +EL  +   + +I+K+E+A  GFVNVFL
Sbjct: 119 CNNAMGLSKKLKEKGISKAPRDIA--------TELKGHCPPSPLIEKLEIAGAGFVNVFL 170

Query: 189 SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLE 248
           S+ YA   + +++ NGV PP +NK+ RVLVDFSSPNIAK+MHVGHLRSTIIG+++ RLLE
Sbjct: 171 SKDYAASALSNLLRNGVSPPEVNKR-RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLE 229

Query: 249 YLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIF 308
           +L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRFDEDE F
Sbjct: 230 FLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEF 289

Query: 309 KKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLV 368
           KKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ  M  +V
Sbjct: 290 KKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISIKERGESFYQSRMLSVV 349

Query: 369 PYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
            YL  KGLLE D+GR+IMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+EEE  DWI
Sbjct: 350 EYLRGKGLLEADEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRVEEELCDWI 409

Query: 428 VYVTD 432
           +YV D
Sbjct: 410 IYVVD 414



 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/385 (57%), Positives = 281/385 (72%), Gaps = 26/385 (6%)

Query: 1066 IRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGD 1125
            ++ +IAEE    G          GAAK     ++D  S+ ++L  VF  A+  AFPE  D
Sbjct: 55   LKKSIAEESNAGG----------GAAK-----LKDSSSITEHLESVFGQAIASAFPEFRD 99

Query: 1126 KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 1185
                +A  N     KFGD+QCN+AM L K  K+KG  K P DIA        +EL  +  
Sbjct: 100  TPVIIAPVNSTSA-KFGDYQCNNAMGLSKKLKEKGISKAPRDIA--------TELKGHCP 150

Query: 1186 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 1245
             + +I+K+E+A  GFVNVFLS+ YA   + +++ NGV PP +NK+ RVLVDFSSPNIAK+
Sbjct: 151  PSPLIEKLEIAGAGFVNVFLSKDYAASALSNLLRNGVSPPEVNKR-RVLVDFSSPNIAKQ 209

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRSTIIG+++ RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI
Sbjct: 210  MHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPI 269

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
            +DLQ FYKESKKRFDEDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL
Sbjct: 270  SDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERL 329

Query: 1366 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTY 1424
            ++++ ERGESFYQ  M  +V YL  KGLLE D+GR+IMW +D +  IP+TIVKSDGGFTY
Sbjct: 330  DISIKERGESFYQSRMLSVVEYLRGKGLLEADEGREIMWPDDTKTGIPLTIVKSDGGFTY 389

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTD 1449
            DTSD+AAIR R+EEE  DWI+YV D
Sbjct: 390  DTSDMAAIRHRVEEELCDWIIYVVD 414


>gi|195175085|ref|XP_002028293.1| GL14083 [Drosophila persimilis]
 gi|194117430|gb|EDW39473.1| GL14083 [Drosophila persimilis]
          Length = 664

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/610 (57%), Positives = 457/610 (74%), Gaps = 11/610 (1%)

Query: 459  QTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQ 518
            Q+     K  + V +  S+ ++L +VF  A+ +AFPE G+    +A  N     K+GD+Q
Sbjct: 60   QSIAYEAKSAMEVTESFSITEHLENVFARAISLAFPEYGNIPVIIAPVNSASA-KYGDYQ 118

Query: 519  CNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL 578
            CN+AM L K  K+ G  + P DIA        +EL     L+ +I+K+EV   GFVNV+L
Sbjct: 119  CNNAMGLAKKMKEMGVNRTPRDIA--------NELQKCCPLSPIINKLEVGGAGFVNVYL 170

Query: 579  SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLE 638
            S+ YA + +K+I+ NG++PP + K+ RVLVDFSSPNIAK+MHVGHLRSTIIG+++ RLLE
Sbjct: 171  SKDYAAQSLKNILRNGIKPPRVLKR-RVLVDFSSPNIAKQMHVGHLRSTIIGESVCRLLE 229

Query: 639  YLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIF 698
            +L HDV+R+NH+GDWGTQFGMLIAHL+D+FPD+L KSPPI DLQ+FYKESKKRFD +E F
Sbjct: 230  FLQHDVIRINHLGDWGTQFGMLIAHLEDRFPDFLNKSPPIGDLQSFYKESKKRFDTEEEF 289

Query: 699  KKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLV 758
            KKRAY  VV+LQ  +P+ +KAW++ICDVSR++FQ IYDRL+VTL ERGESFYQ  M  +V
Sbjct: 290  KKRAYNRVVSLQSGEPNSRKAWQLICDVSRQEFQAIYDRLDVTLRERGESFYQSRMLSVV 349

Query: 759  PYLEKKGLLELDDGRKIMW-GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
             +L  K +LE D+GR+IMW  EDR  IP+TIVKSDGGFTYDTSD+AAIR RIEEE   WI
Sbjct: 350  DFLRNKNMLEHDEGRQIMWPNEDRSGIPLTIVKSDGGFTYDTSDMAAIRHRIEEEHCTWI 409

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +YV D GQ  HF  + + A++  ILNP   R+  V FGVVLGED KKFKTRSGDTVKLS+
Sbjct: 410  IYVVDSGQSTHFNTIFKAAERCCILNPTAHRVHHVQFGVVLGEDGKKFKTRSGDTVKLSD 469

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LL+EG++RSL++L+ + R   LT  EL EAQ+AVAYGCIKY+DL HNR  DYVFSFDKML
Sbjct: 470  LLNEGMKRSLEQLRSRGRDEILTAQELFEAQEAVAYGCIKYSDLCHNRISDYVFSFDKML 529

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
            DDRGNTAVYLLY YTRI SIAR  G +   L     +  + L HEKE+ LAKTLL+M+D+
Sbjct: 530  DDRGNTAVYLLYTYTRICSIARNLGDDFCYLLKVLDTVEIVLNHEKEWKLAKTLLKMHDI 589

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            ++  ++DL LH LCE+ Y++ T F+EFYD+CYCI+K+ +G+I  V+  R+L+ EATA V+
Sbjct: 590  MIKCSKDLFLHFLCEFCYEVCTVFTEFYDSCYCIKKNKDGEIIEVNRSRVLMCEATAAVL 649

Query: 1058 KKCFDILNIR 1067
            ++CF IL ++
Sbjct: 650  RQCFYILGLK 659



 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/429 (53%), Positives = 307/429 (71%), Gaps = 30/429 (6%)

Query: 5   ELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISS 64
           E   +E  ++V  ++ K   +E+  +D++  QL+NTKLKHRL+I++++IA E K      
Sbjct: 15  ERTTEELSTQVKSVTGKDHYAET-DDDLIKLQLKNTKLKHRLSIIRQSIAYEAKSA---- 69

Query: 65  SISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKF 124
                         + V +  S+ ++L +VF  A+ +AFPE G+    +A  N     K+
Sbjct: 70  --------------MEVTESFSITEHLENVFARAISLAFPEYGNIPVIIAPVNSASA-KY 114

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD+QCN+AM L K  K+ G  + P DIA        +EL     L+ +I+K+EV   GFV
Sbjct: 115 GDYQCNNAMGLAKKMKEMGVNRTPRDIA--------NELQKCCPLSPIINKLEVGGAGFV 166

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           NV+LS+ YA + +K+I+ NG++PP + K+ RVLVDFSSPNIAK+MHVGHLRSTIIG+++ 
Sbjct: 167 NVYLSKDYAAQSLKNILRNGIKPPRVLKR-RVLVDFSSPNIAKQMHVGHLRSTIIGESVC 225

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FPD+L KSPPI DLQ+FYKESKKRFD 
Sbjct: 226 RLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPDFLNKSPPIGDLQSFYKESKKRFDT 285

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 364
           +E FKKRAY  VV+LQ  +P+ +KAW++ICDVSR++FQ IYDRL+VTL ERGESFYQ  M
Sbjct: 286 EEEFKKRAYNRVVSLQSGEPNSRKAWQLICDVSRQEFQAIYDRLDVTLRERGESFYQSRM 345

Query: 365 EQLVPYLEKKGLLELDDGRKIMW-GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
             +V +L  K +LE D+GR+IMW  EDR  IP+TIVKSDGGFTYDTSD+AAIR RIEEE 
Sbjct: 346 LSVVDFLRNKNMLEHDEGRQIMWPNEDRSGIPLTIVKSDGGFTYDTSDMAAIRHRIEEEH 405

Query: 424 ADWIVYVTD 432
             WI+YV D
Sbjct: 406 CTWIIYVVD 414



 Score =  448 bits (1152), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/369 (57%), Positives = 275/369 (74%), Gaps = 11/369 (2%)

Query: 1082 SISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKF 1141
            SI  Q+     K  + V +  S+ ++L +VF  A+ +AFPE G+    +A  N     K+
Sbjct: 56   SIIRQSIAYEAKSAMEVTESFSITEHLENVFARAISLAFPEYGNIPVIIAPVNSASA-KY 114

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD+QCN+AM L K  K+ G  + P DIA        +EL     L+ +I+K+EV   GFV
Sbjct: 115  GDYQCNNAMGLAKKMKEMGVNRTPRDIA--------NELQKCCPLSPIINKLEVGGAGFV 166

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            NV+LS+ YA + +K+I+ NG++PP + K+ RVLVDFSSPNIAK+MHVGHLRSTIIG+++ 
Sbjct: 167  NVYLSKDYAAQSLKNILRNGIKPPRVLKR-RVLVDFSSPNIAKQMHVGHLRSTIIGESVC 225

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FPD+L KSPPI DLQ+FYKESKKRFD 
Sbjct: 226  RLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPDFLNKSPPIGDLQSFYKESKKRFDT 285

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 1381
            +E FKKRAY  VV+LQ  +P+ +KAW++ICDVSR++FQ IYDRL+VTL ERGESFYQ  M
Sbjct: 286  EEEFKKRAYNRVVSLQSGEPNSRKAWQLICDVSRQEFQAIYDRLDVTLRERGESFYQSRM 345

Query: 1382 EQLVPYLEKKGLLELDDGRKIMW-GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 1440
              +V +L  K +LE D+GR+IMW  EDR  IP+TIVKSDGGFTYDTSD+AAIR RIEEE 
Sbjct: 346  LSVVDFLRNKNMLEHDEGRQIMWPNEDRSGIPLTIVKSDGGFTYDTSDMAAIRHRIEEEH 405

Query: 1441 ADWIVYVTD 1449
              WI+YV D
Sbjct: 406  CTWIIYVVD 414


>gi|156383395|ref|XP_001632819.1| predicted protein [Nematostella vectensis]
 gi|156219881|gb|EDO40756.1| predicted protein [Nematostella vectensis]
          Length = 588

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/589 (59%), Positives = 452/589 (76%), Gaps = 13/589 (2%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L+++F  A++VAFP + D    V ST      KFGD+QCN AM L +I K+ G+K NP  
Sbjct: 8    LNELFKQAIRVAFPAVTDPPILVQSTQND---KFGDYQCNSAMGLSQILKNNGQKANP-- 62

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
              Q+IA  + + L  N     +I+K+++A PGF+NV +++ +  + ++D++ NGV PP +
Sbjct: 63   --QAIAKSIIASLPPN----DLIEKVDIAGPGFINVHMNKKFIKDILRDVVANGVHPPAI 116

Query: 601  NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 660
              + R +VDFSSPNIAKEMHVGHLRSTIIG++I RLLEY+GHDV+RLNH+GDWGTQFGML
Sbjct: 117  RSRQRCIVDFSSPNIAKEMHVGHLRSTIIGESICRLLEYVGHDVLRLNHIGDWGTQFGML 176

Query: 661  IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
            IAHLQD+FPDYL KSPPI DLQAFYKESK  FD DE FKKRAY+ VV LQ+ +P+ +KAW
Sbjct: 177  IAHLQDEFPDYLEKSPPIEDLQAFYKESKTLFDSDEQFKKRAYERVVQLQQGEPNVRKAW 236

Query: 721  EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 780
            EMICDVSR++F+K+Y+RL VT+ ERGESFYQ  M QLV  LE KG + ++DGRK+++ E 
Sbjct: 237  EMICDVSRKEFEKLYERLGVTIIERGESFYQPMMPQLVELLESKGKVLVEDGRKVVFVEG 296

Query: 781  RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAG 840
               +P+T+VKSDGG+TYDTSDLAA+RQR+E+E+ DWI+YVTD GQ  HF L+   A++AG
Sbjct: 297  Y-KVPLTVVKSDGGYTYDTSDLAALRQRVEDERGDWIIYVTDAGQSGHFDLVFGAAREAG 355

Query: 841  ILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELT 900
            I +P +TR+D VGFGVVLGEDRKKFKTRSG+TV+L +L+DEG+RRS+DKLK+K R   L+
Sbjct: 356  IYDPKRTRVDHVGFGVVLGEDRKKFKTRSGETVRLVDLMDEGIRRSVDKLKEKGRDQALS 415

Query: 901  PTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIART 960
              EL  A +AVAYGCIKYADLSHNR  DYVFSFDKMLDD+GNTAVYLLYAYTRI SI RT
Sbjct: 416  EDELRAASEAVAYGCIKYADLSHNRVGDYVFSFDKMLDDKGNTAVYLLYAYTRIRSIMRT 475

Query: 961  AGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTA 1020
            AG++   L  A  +T +SLEH KE+ L K + R   VL  +  DL +H LCE+LY+++T 
Sbjct: 476  AGMDRASLEQAIHNTEISLEHPKEWKLGKCITRFPQVLSRILEDLLMHPLCEFLYELATT 535

Query: 1021 FSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             +EFYD+CYC+EKD + G I  V+  RLLL EATA++M+  F IL I T
Sbjct: 536  TTEFYDSCYCVEKDRQTGDIVKVNVDRLLLLEATARIMETGFHILGINT 584



 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/342 (59%), Positives = 266/342 (77%), Gaps = 12/342 (3%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L+++F  A++VAFP + D    V ST      KFGD+QCN AM L +I K+ G+K NP  
Sbjct: 8   LNELFKQAIRVAFPAVTDPPILVQSTQND---KFGDYQCNSAMGLSQILKNNGQKANP-- 62

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 210
             Q+IA  + + L  N     +I+K+++A PGF+NV +++ +  + ++D++ NGV PP +
Sbjct: 63  --QAIAKSIIASLPPN----DLIEKVDIAGPGFINVHMNKKFIKDILRDVVANGVHPPAI 116

Query: 211 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 270
             + R +VDFSSPNIAKEMHVGHLRSTIIG++I RLLEY+GHDV+RLNH+GDWGTQFGML
Sbjct: 117 RSRQRCIVDFSSPNIAKEMHVGHLRSTIIGESICRLLEYVGHDVLRLNHIGDWGTQFGML 176

Query: 271 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 330
           IAHLQD+FPDYL KSPPI DLQAFYKESK  FD DE FKKRAY+ VV LQ+ +P+ +KAW
Sbjct: 177 IAHLQDEFPDYLEKSPPIEDLQAFYKESKTLFDSDEQFKKRAYERVVQLQQGEPNVRKAW 236

Query: 331 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 390
           EMICDVSR++F+K+Y+RL VT+ ERGESFYQ  M QLV  LE KG + ++DGRK+++ E 
Sbjct: 237 EMICDVSRKEFEKLYERLGVTIIERGESFYQPMMPQLVELLESKGKVLVEDGRKVVFVEG 296

Query: 391 RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
              +P+T+VKSDGG+TYDTSDLAA+RQR+E+E+ DWI+YVTD
Sbjct: 297 Y-KVPLTVVKSDGGYTYDTSDLAALRQRVEDERGDWIIYVTD 337



 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/342 (59%), Positives = 266/342 (77%), Gaps = 12/342 (3%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L+++F  A++VAFP + D    V ST      KFGD+QCN AM L +I K+ G+K NP  
Sbjct: 8    LNELFKQAIRVAFPAVTDPPILVQSTQND---KFGDYQCNSAMGLSQILKNNGQKANP-- 62

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
              Q+IA  + + L  N     +I+K+++A PGF+NV +++ +  + ++D++ NGV PP +
Sbjct: 63   --QAIAKSIIASLPPN----DLIEKVDIAGPGFINVHMNKKFIKDILRDVVANGVHPPAI 116

Query: 1228 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 1287
              + R +VDFSSPNIAKEMHVGHLRSTIIG++I RLLEY+GHDV+RLNH+GDWGTQFGML
Sbjct: 117  RSRQRCIVDFSSPNIAKEMHVGHLRSTIIGESICRLLEYVGHDVLRLNHIGDWGTQFGML 176

Query: 1288 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            IAHLQD+FPDYL KSPPI DLQAFYKESK  FD DE FKKRAY+ VV LQ+ +P+ +KAW
Sbjct: 177  IAHLQDEFPDYLEKSPPIEDLQAFYKESKTLFDSDEQFKKRAYERVVQLQQGEPNVRKAW 236

Query: 1348 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 1407
            EMICDVSR++F+K+Y+RL VT+ ERGESFYQ  M QLV  LE KG + ++DGRK+++ E 
Sbjct: 237  EMICDVSRKEFEKLYERLGVTIIERGESFYQPMMPQLVELLESKGKVLVEDGRKVVFVEG 296

Query: 1408 RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
               +P+T+VKSDGG+TYDTSDLAA+RQR+E+E+ DWI+YVTD
Sbjct: 297  Y-KVPLTVVKSDGGYTYDTSDLAALRQRVEDERGDWIIYVTD 337


>gi|18859963|ref|NP_573081.1| Arginyl-tRNA synthetase [Drosophila melanogaster]
 gi|20178140|sp|Q9VXN4.1|SYRC_DROME RecName: Full=Probable arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|7293140|gb|AAF48524.1| Arginyl-tRNA synthetase [Drosophila melanogaster]
 gi|17944966|gb|AAL48546.1| RE02962p [Drosophila melanogaster]
 gi|220947778|gb|ACL86432.1| Aats-arg-PA [synthetic construct]
          Length = 665

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/597 (58%), Positives = 458/597 (76%), Gaps = 11/597 (1%)

Query: 472  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            ++  S+ ++L  VF  A+  AFPE  D    +A  N     KFGD+QCN+AM L K  K+
Sbjct: 74   KESSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSA-KFGDYQCNNAMGLSKKLKE 132

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            KG  K P DIA        +EL  +   + +I+K+E+A  GFVNVFLS+ YA   + +++
Sbjct: 133  KGINKAPRDIA--------TELKGHCPASPIIEKLEIAGAGFVNVFLSKDYASLALSNLL 184

Query: 592  VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
             NGV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+++ RLLE+L HDV+R+NH+G
Sbjct: 185  RNGVKPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLG 243

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRFDEDE FKKRAY  VV+LQ+
Sbjct: 244  DWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQK 303

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
              P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ  M  +V YL  KGLLE+D+
Sbjct: 304  GVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQSRMLSVVEYLRGKGLLEVDE 363

Query: 772  GRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            GR+IMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+EEE  DWI+YV D GQ  HF 
Sbjct: 364  GREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFN 423

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
             + + A+++ ILNP   R+D V FGVVLGED KKFKTRSGDTVKLS+LLDEG++RSL +L
Sbjct: 424  TIFKAAERSAILNPLSHRVDHVQFGVVLGEDGKKFKTRSGDTVKLSDLLDEGMKRSLQQL 483

Query: 891  KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            + + R   LTP EL +AQ+++AYGCIKY+DL HNR  DY+FSFDKML+DRGNTAVYLLY 
Sbjct: 484  ESRGRDKVLTPQELKDAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYT 543

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            YTRI SIAR +G +  +L    + T + L+HEKE+ LAKTLL+++D+L+  +++L LH L
Sbjct: 544  YTRICSIARNSGEDFTNLPEILKKTNIVLDHEKEWKLAKTLLKLHDILIKCSKELFLHFL 603

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            CE+ +++ T F+EFYD+CYCIEK+ +G I  V+  R+LL EATA V+++CF IL ++
Sbjct: 604  CEFCFEVCTVFTEFYDSCYCIEKNKQGDIIGVNHSRILLCEATAAVLRQCFYILGLK 660



 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/430 (53%), Positives = 308/430 (71%), Gaps = 28/430 (6%)

Query: 7   KLKEFISKVNELSTKGFISESATE---DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           KL+E   K   L+ +   ++S  +   D++  Q++N KLK+RL IL+++IAEE       
Sbjct: 10  KLRELELKTQGLAARIQTAKSGEQLDVDLVQLQIENKKLKNRLFILKKSIAEE------- 62

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                 +  A   ++ P ++  S+ ++L  VF  A+  AFPE  D    +A  N     K
Sbjct: 63  ------STAAGGDVSKP-KESSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSA-K 114

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN+AM L K  K+KG  K P DIA        +EL  +   + +I+K+E+A  GF
Sbjct: 115 FGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCPASPIIEKLEIAGAGF 166

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           VNVFLS+ YA   + +++ NGV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+++
Sbjct: 167 VNVFLSKDYASLALSNLLRNGVKPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTIIGESL 225

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRFD
Sbjct: 226 CRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFD 285

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
           EDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ  
Sbjct: 286 EDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQSR 345

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
           M  +V YL  KGLLE+D+GR+IMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+EEE
Sbjct: 346 MLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEE 405

Query: 423 KADWIVYVTD 432
             DWI+YV D
Sbjct: 406 LCDWIIYVVD 415



 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/372 (57%), Positives = 279/372 (75%), Gaps = 12/372 (3%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
            +  SI+ ++  A   ++ P ++  S+ ++L  VF  A+  AFPE  D    +A  N    
Sbjct: 55   LKKSIAEESTAAGGDVSKP-KESSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSA 113

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             KFGD+QCN+AM L K  K+KG  K P DIA        +EL  +   + +I+K+E+A  
Sbjct: 114  -KFGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCPASPIIEKLEIAGA 164

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            GFVNVFLS+ YA   + +++ NGV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+
Sbjct: 165  GFVNVFLSKDYASLALSNLLRNGVKPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTIIGE 223

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            ++ RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKR
Sbjct: 224  SLCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKR 283

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 1378
            FDEDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ
Sbjct: 284  FDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQ 343

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 1437
              M  +V YL  KGLLE+D+GR+IMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+E
Sbjct: 344  SRMLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLE 403

Query: 1438 EEKADWIVYVTD 1449
            EE  DWI+YV D
Sbjct: 404  EELCDWIIYVVD 415


>gi|195355443|ref|XP_002044201.1| GM22521 [Drosophila sechellia]
 gi|194129490|gb|EDW51533.1| GM22521 [Drosophila sechellia]
          Length = 665

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/620 (56%), Positives = 465/620 (75%), Gaps = 16/620 (2%)

Query: 449  KQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNE 508
            K+ I+  S++     AK      ++  S+ ++L  VF  A+  AFPE  D    +A  N 
Sbjct: 56   KKSIAEESNAGGGAAAKP-----KESSSITEHLESVFGQAIASAFPEFRDTPVIIAPVNS 110

Query: 509  KYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEV 568
                KFGD+QCN+AM L K  K+KG  K P DIA        +EL  +   + +I+K+E+
Sbjct: 111  TSA-KFGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCPASPIIEKLEI 161

Query: 569  AKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            A  GFVNVFLS+ YA   + +++ NGV PP + KK RVLVDFSSPNIAK+MHVGHLRSTI
Sbjct: 162  AGAGFVNVFLSKDYASSALSNLLRNGVTPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTI 220

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IG+++ RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKES
Sbjct: 221  IGESLCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKES 280

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 748
            KKRFDEDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++++ ERGES
Sbjct: 281  KKRFDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISVKERGES 340

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQ 807
            FYQ  M  +V YL  KGLLE+D+GR+IMW +D +  IP+TIVKSDGGFTYDTSD+AAIR 
Sbjct: 341  FYQSRMLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRH 400

Query: 808  RIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKT 867
            R+EEE  DWI+YV D GQ  HF  + + A+++ ILNP   R+D V FGVVLGED KKFKT
Sbjct: 401  RLEEELCDWIIYVVDSGQSTHFNTIFKAAERSAILNPLSHRVDHVQFGVVLGEDGKKFKT 460

Query: 868  RSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNL 927
            RSGDTVKL++LLDEG++RSL +L+ + R   LTP EL +AQ+++AYGCIKY+DL HNR  
Sbjct: 461  RSGDTVKLADLLDEGMKRSLQQLESRGRDKVLTPQELKDAQESLAYGCIKYSDLCHNRIS 520

Query: 928  DYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFAL 987
            DY+FSFDKML+DRGNTAVYLLY YTRI SIAR +G +  +L    + T + L HEKE+ L
Sbjct: 521  DYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSGEDFTNLPEILKKTNIVLAHEKEWKL 580

Query: 988  AKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRL 1047
            AKTLL+++D+L+  +++L LH LCE+ +++ T F+EFYD+CYCIEK+ +G I  V+  R+
Sbjct: 581  AKTLLKLHDILIKCSKELFLHFLCEFCFEVCTVFTEFYDSCYCIEKNKQGDIIAVNHSRI 640

Query: 1048 LLAEATAKVMKKCFDILNIR 1067
            L+ EATA V+++CF IL ++
Sbjct: 641  LMCEATAAVLRQCFYILGLK 660



 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/425 (55%), Positives = 302/425 (71%), Gaps = 33/425 (7%)

Query: 17  ELSTKGFISESATE--------DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISS 68
           EL T+G  +   T         D++  Q++N KLK+RL IL+++IAEE    G       
Sbjct: 15  ELKTQGLAARIQTAKNGEQLDVDLVQLQIENKKLKNRLFILKKSIAEESNAGG------- 67

Query: 69  QTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQ 128
              GAA K     ++  S+ ++L  VF  A+  AFPE  D    +A  N     KFGD+Q
Sbjct: 68  ---GAAAK----PKESSSITEHLESVFGQAIASAFPEFRDTPVIIAPVNSTSA-KFGDYQ 119

Query: 129 CNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL 188
           CN+AM L K  K+KG  K P DIA        +EL  +   + +I+K+E+A  GFVNVFL
Sbjct: 120 CNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCPASPIIEKLEIAGAGFVNVFL 171

Query: 189 SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLE 248
           S+ YA   + +++ NGV PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+++ RLLE
Sbjct: 172 SKDYASSALSNLLRNGVTPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLE 230

Query: 249 YLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIF 308
           +L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRFDEDE F
Sbjct: 231 FLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEF 290

Query: 309 KKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLV 368
           KKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ  M  +V
Sbjct: 291 KKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQSRMLSVV 350

Query: 369 PYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
            YL  KGLLE+D+GR+IMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+EEE  DWI
Sbjct: 351 EYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEELCDWI 410

Query: 428 VYVTD 432
           +YV D
Sbjct: 411 IYVVD 415



 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/385 (56%), Positives = 280/385 (72%), Gaps = 25/385 (6%)

Query: 1066 IRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGD 1125
            ++ +IAEE    G          GAA K     ++  S+ ++L  VF  A+  AFPE  D
Sbjct: 55   LKKSIAEESNAGG----------GAAAK----PKESSSITEHLESVFGQAIASAFPEFRD 100

Query: 1126 KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 1185
                +A  N     KFGD+QCN+AM L K  K+KG  K P DIA        +EL  +  
Sbjct: 101  TPVIIAPVNSTSA-KFGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCP 151

Query: 1186 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 1245
             + +I+K+E+A  GFVNVFLS+ YA   + +++ NGV PP + KK RVLVDFSSPNIAK+
Sbjct: 152  ASPIIEKLEIAGAGFVNVFLSKDYASSALSNLLRNGVTPPEVIKK-RVLVDFSSPNIAKQ 210

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRSTIIG+++ RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI
Sbjct: 211  MHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPI 270

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
            +DLQ FYKESKKRFDEDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL
Sbjct: 271  SDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERL 330

Query: 1366 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTY 1424
            ++++ ERGESFYQ  M  +V YL  KGLLE+D+GR+IMW +D +  IP+TIVKSDGGFTY
Sbjct: 331  DISVKERGESFYQSRMLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTY 390

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTD 1449
            DTSD+AAIR R+EEE  DWI+YV D
Sbjct: 391  DTSDMAAIRHRLEEELCDWIIYVVD 415


>gi|53734470|gb|AAH83505.1| Arginyl-tRNA synthetase [Danio rerio]
          Length = 661

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/607 (58%), Positives = 463/607 (76%), Gaps = 13/607 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            +   ++MN   +  +++   L  +F  A+  A+P+L +   +V  + +    KFGD+QCN
Sbjct: 61   RSLQEEMNHNGKTMLNINQLLQQIFGEAISSAYPDLENPPLAVTPSQQA---KFGDYQCN 117

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AMA+ ++ K KG K +P +IA+ I   + +          +I+K E+A PGF+NV L R
Sbjct: 118  SAMAMSQMMKAKGLKVSPREIAEKIVQNIPNN--------DLIEKTEIAGPGFINVHLKR 169

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  + + +++VNGVQPP L KK +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+L
Sbjct: 170  NFVSKLLSNVLVNGVQPPPLQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFL 229

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G++V+RLNHVGDWGTQFGMLIAHLQDKFP+YL+ SPPI DLQAFYKESKKRFDEDE FKK
Sbjct: 230  GYEVLRLNHVGDWGTQFGMLIAHLQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKK 289

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAY+CVV LQ  + D+ KAW +ICDVSR++FQK+Y+ L++++ ERGES+YQ  M  +V  
Sbjct: 290  RAYKCVVKLQSKEADFIKAWNLICDVSRKEFQKVYNCLDISIKERGESYYQDMMTAVVKE 349

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E+KGL+E+D+GRKI++   + SIP+TIVKSDGG+TYDTSDLAAIR R+ +EKAD I+YV
Sbjct: 350  FEEKGLVEVDEGRKIVFAPGQ-SIPLTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYV 408

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
            TD GQ +HF+++   A+  G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LL+
Sbjct: 409  TDSGQAMHFQVIFAAAQLIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLE 468

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LTP EL +AQQAVA+GCIKYADLSHNR  DYVFSFDKMLDDR
Sbjct: 469  EGLKRSMDKLKEKERDKVLTPEELEKAQQAVAFGCIKYADLSHNRINDYVFSFDKMLDDR 528

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I    LR AA++T V L+HEKE+ L K +LR  ++L  
Sbjct: 529  GNTAAYLLYAFTRIRSIARLANIQEAALRKAAETTDVILDHEKEWKLGKCILRFPEILQK 588

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +T DL LH LC+YLY+++T F+EFYD+CYC+EKD + G++  V+  R+LL EATA VM K
Sbjct: 589  ITDDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCEATAAVMAK 648

Query: 1060 CFDILNI 1066
             FDIL I
Sbjct: 649  GFDILGI 655



 Score =  438 bits (1126), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/410 (52%), Positives = 294/410 (71%), Gaps = 34/410 (8%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N++LK+RL IL+R++ EE                    MN   +  +++   L  +F  
Sbjct: 48  ENSRLKYRLNILKRSLQEE--------------------MNHNGKTMLNINQLLQQIFGE 87

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A+  A+P+L +   +V  + +    KFGD+QCN AMA+ ++ K KG K +P +IA+ I  
Sbjct: 88  AISSAYPDLENPPLAVTPSQQA---KFGDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQ 144

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVL 217
            + +          +I+K E+A PGF+NV L R +  + + +++VNGVQPP L KK +V+
Sbjct: 145 NIPNN--------DLIEKTEIAGPGFINVHLKRNFVSKLLSNVLVNGVQPPPLQKKKKVI 196

Query: 218 VDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDK 277
           VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG++V+RLNHVGDWGTQFGMLIAHLQDK
Sbjct: 197 VDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWGTQFGMLIAHLQDK 256

Query: 278 FPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           FP+YL+ SPPI DLQAFYKESKKRFDEDE FKKRAY+CVV LQ  + D+ KAW +ICDVS
Sbjct: 257 FPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYKCVVKLQSKEADFIKAWNLICDVS 316

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 397
           R++FQK+Y+ L++++ ERGES+YQ  M  +V   E+KGL+E+D+GRKI++   + SIP+T
Sbjct: 317 RKEFQKVYNCLDISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRKIVFAPGQ-SIPLT 375

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIAE 445
           IVKSDGG+TYDTSDLAAIR R+ +EKAD I+YVTD     + QV+ A A+
Sbjct: 376 IVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYVTDSGQAMHFQVIFAAAQ 425



 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/358 (56%), Positives = 272/358 (75%), Gaps = 12/358 (3%)

Query: 1092 KKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMA 1151
            ++MN   +  +++   L  +F  A+  A+P+L +   +V  + +    KFGD+QCN AMA
Sbjct: 65   EEMNHNGKTMLNINQLLQQIFGEAISSAYPDLENPPLAVTPSQQA---KFGDYQCNSAMA 121

Query: 1152 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 1211
            + ++ K KG K +P +IA+ I   + +          +I+K E+A PGF+NV L R +  
Sbjct: 122  MSQMMKAKGLKVSPREIAEKIVQNIPNN--------DLIEKTEIAGPGFINVHLKRNFVS 173

Query: 1212 EQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 1271
            + + +++VNGVQPP L KK +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG++V
Sbjct: 174  KLLSNVLVNGVQPPPLQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEV 233

Query: 1272 VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 1331
            +RLNHVGDWGTQFGMLIAHLQDKFP+YL+ SPPI DLQAFYKESKKRFDEDE FKKRAY+
Sbjct: 234  LRLNHVGDWGTQFGMLIAHLQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYK 293

Query: 1332 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 1391
            CVV LQ  + D+ KAW +ICDVSR++FQK+Y+ L++++ ERGES+YQ  M  +V   E+K
Sbjct: 294  CVVKLQSKEADFIKAWNLICDVSRKEFQKVYNCLDISIKERGESYYQDMMTAVVKEFEEK 353

Query: 1392 GLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            GL+E+D+GRKI++   + SIP+TIVKSDGG+TYDTSDLAAIR R+ +EKAD I+YVTD
Sbjct: 354  GLVEVDEGRKIVFAPGQ-SIPLTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYVTD 410


>gi|41053407|ref|NP_956342.1| arginine--tRNA ligase, cytoplasmic [Danio rerio]
 gi|28277820|gb|AAH45884.1| Arginyl-tRNA synthetase [Danio rerio]
          Length = 661

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/607 (58%), Positives = 463/607 (76%), Gaps = 13/607 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            +   ++MN   +  +++   L  +F  A+  A+P+L +   SV  + +    KFGD+QCN
Sbjct: 61   RSLQEEMNHNGKTMLNINQLLQQIFGEAISSAYPDLENPPLSVTPSQQA---KFGDYQCN 117

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AMA+ ++ K KG K +P +IA+ I   + +          +I+K E+A PGF+NV L R
Sbjct: 118  SAMAMSQMMKAKGLKVSPREIAEKIVQNIPNN--------DLIEKTEIAGPGFINVHLKR 169

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  + + +++VNGVQPP L KK +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+L
Sbjct: 170  NFVSKLLSNVLVNGVQPPPLQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFL 229

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G++V+RLNHVGDWGTQFGMLIAHLQDKFP+YL+ SPPI DLQAFYKESKKRFDEDE FKK
Sbjct: 230  GYEVLRLNHVGDWGTQFGMLIAHLQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKK 289

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAY+CVV LQ  + D+ KAW +ICDVSR++FQK+Y+ L++++ ERGES+YQ  M  +V  
Sbjct: 290  RAYKCVVKLQSKEADFIKAWNLICDVSRKEFQKVYNCLDISIKERGESYYQDMMTAVVKE 349

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E+KGL+E+D+GRKI++   + SIP+TIVKSDGG+TYDTSDLAAIR R+ +EKAD I+YV
Sbjct: 350  FEEKGLVEVDEGRKIVFAPGQ-SIPLTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYV 408

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
            TD GQ +HF+++   A+  G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LL+
Sbjct: 409  TDSGQAMHFQVIFAAAQLIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLE 468

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LTP EL +AQ+AVA+GCIKYADLSHNR  DYVFSFDKMLDDR
Sbjct: 469  EGLKRSMDKLKEKERDKVLTPEELEKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLDDR 528

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I    LR AA++T V L+HEKE+ L K +LR  ++L  
Sbjct: 529  GNTAAYLLYAFTRIRSIARLANIQEAALRKAAETTDVILDHEKEWKLGKCILRFPEILQK 588

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +T DL LH LC+YLY+++T F+EFYD+CYC+EKD + G++  V+  R+LL EATA VM K
Sbjct: 589  ITDDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCEATAAVMAK 648

Query: 1060 CFDILNI 1066
             FDIL I
Sbjct: 649  GFDILGI 655



 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/410 (53%), Positives = 294/410 (71%), Gaps = 34/410 (8%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N++LK+RL IL+R++ EE                    MN   +  +++   L  +F  
Sbjct: 48  ENSRLKYRLNILKRSLQEE--------------------MNHNGKTMLNINQLLQQIFGE 87

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A+  A+P+L +   SV  + +    KFGD+QCN AMA+ ++ K KG K +P +IA+ I  
Sbjct: 88  AISSAYPDLENPPLSVTPSQQA---KFGDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQ 144

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVL 217
            + +          +I+K E+A PGF+NV L R +  + + +++VNGVQPP L KK +V+
Sbjct: 145 NIPNN--------DLIEKTEIAGPGFINVHLKRNFVSKLLSNVLVNGVQPPPLQKKKKVI 196

Query: 218 VDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDK 277
           VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG++V+RLNHVGDWGTQFGMLIAHLQDK
Sbjct: 197 VDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWGTQFGMLIAHLQDK 256

Query: 278 FPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           FP+YL+ SPPI DLQAFYKESKKRFDEDE FKKRAY+CVV LQ  + D+ KAW +ICDVS
Sbjct: 257 FPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYKCVVKLQSKEADFIKAWNLICDVS 316

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 397
           R++FQK+Y+ L++++ ERGES+YQ  M  +V   E+KGL+E+D+GRKI++   + SIP+T
Sbjct: 317 RKEFQKVYNCLDISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRKIVFAPGQ-SIPLT 375

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIAE 445
           IVKSDGG+TYDTSDLAAIR R+ +EKAD I+YVTD     + QV+ A A+
Sbjct: 376 IVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYVTDSGQAMHFQVIFAAAQ 425



 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/388 (53%), Positives = 285/388 (73%), Gaps = 14/388 (3%)

Query: 1064 LNIRTAIAEE--EKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFP 1121
            LN+ ++  +E  E+   +   ++   +   ++MN   +  +++   L  +F  A+  A+P
Sbjct: 35   LNLTSSQLDELREENSRLKYRLNILKRSLQEEMNHNGKTMLNINQLLQQIFGEAISSAYP 94

Query: 1122 ELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELA 1181
            +L +   SV  + +    KFGD+QCN AMA+ ++ K KG K +P +IA+ I   + +   
Sbjct: 95   DLENPPLSVTPSQQA---KFGDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQNIPNN-- 149

Query: 1182 TNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPN 1241
                   +I+K E+A PGF+NV L R +  + + +++VNGVQPP L KK +V+VDFSSPN
Sbjct: 150  ------DLIEKTEIAGPGFINVHLKRNFVSKLLSNVLVNGVQPPPLQKKKKVIVDFSSPN 203

Query: 1242 IAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK 1301
            IAKEMHVGHLRSTIIGD++ RL E+LG++V+RLNHVGDWGTQFGMLIAHLQDKFP+YL+ 
Sbjct: 204  IAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWGTQFGMLIAHLQDKFPNYLSV 263

Query: 1302 SPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKI 1361
            SPPI DLQAFYKESKKRFDEDE FKKRAY+CVV LQ  + D+ KAW +ICDVSR++FQK+
Sbjct: 264  SPPIGDLQAFYKESKKRFDEDEEFKKRAYKCVVKLQSKEADFIKAWNLICDVSRKEFQKV 323

Query: 1362 YDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGG 1421
            Y+ L++++ ERGES+YQ  M  +V   E+KGL+E+D+GRKI++   + SIP+TIVKSDGG
Sbjct: 324  YNCLDISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRKIVFAPGQ-SIPLTIVKSDGG 382

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +TYDTSDLAAIR R+ +EKAD I+YVTD
Sbjct: 383  YTYDTSDLAAIRNRLFDEKADIIIYVTD 410


>gi|195553723|ref|XP_002076727.1| GD24677 [Drosophila simulans]
 gi|194202717|gb|EDX16293.1| GD24677 [Drosophila simulans]
          Length = 665

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/628 (56%), Positives = 466/628 (74%), Gaps = 25/628 (3%)

Query: 441  QAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKT 500
            ++IAEE    G ++S   ++               S+ ++L  VF  A+  AFPE  D  
Sbjct: 57   KSIAEESNAGGGAASKPKESS--------------SITEHLESVFGQAIASAFPEFRDTP 102

Query: 501  ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 560
              +A  N     KFGD+QCN+AM L K  K+KG  K P DIA        +EL  +   +
Sbjct: 103  VIIAPVNSTSA-KFGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCPAS 153

Query: 561  KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
             +I+K+E+A  GFVNVFLS+ YA   + +++ NGV PP + KK RVLVDFSSPNIAK+MH
Sbjct: 154  PIIEKLEIAGAGFVNVFLSKDYASSALSNLLRNGVTPPEVIKK-RVLVDFSSPNIAKQMH 212

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
            VGHLRSTIIG+++ RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+D
Sbjct: 213  VGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISD 272

Query: 681  LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 740
            LQ FYKESKKRFDEDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++
Sbjct: 273  LQLFYKESKKRFDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDI 332

Query: 741  TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDT 799
            ++ ERGESFYQ  M  +V YL  KGLLE+D+GR+IMW +D +  IP+TIVKSDGGFTYDT
Sbjct: 333  SVKERGESFYQSRMLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTYDT 392

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            SD+AAIR R+EEE  DWI+YV D GQ  HF  + + A+++ ILNP   R+D V FGVVLG
Sbjct: 393  SDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAAERSAILNPLSHRVDHVQFGVVLG 452

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            ED KKFKTRSGDTVKL++LLDEG++RSL +L+ + R   LTP EL +AQ+++AYGCIKY+
Sbjct: 453  EDGKKFKTRSGDTVKLADLLDEGMKRSLQQLESRGRDKVLTPQELKDAQESLAYGCIKYS 512

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DL HNR  DY+FSFDKML+DRGNTAVYLLY YTRI SIAR +G +  +L    + T + L
Sbjct: 513  DLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSGEDFTNLPEILKKTNIVL 572

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
             HEKE+ LAKTLL+++D+L+  +++L LH LCE+ +++ T F+EFYD+CYCIEK+ +G I
Sbjct: 573  AHEKEWKLAKTLLKLHDILIKCSKELFLHFLCEFCFEVCTVFTEFYDSCYCIEKNKQGDI 632

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIR 1067
              V+  R+L+ EATA V+++CF IL ++
Sbjct: 633  IAVNHSRILMCEATAAVLRQCFYILGLK 660



 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 235/430 (54%), Positives = 307/430 (71%), Gaps = 28/430 (6%)

Query: 7   KLKEFISKVNELSTKGFISESATE---DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           KL+E   K   L+ +   ++S  +   D++  Q++N KLK+RL IL+++IAEE    G  
Sbjct: 10  KLRELELKTQGLAARIQTAKSGEQLDVDLVQLQIENKKLKNRLFILKKSIAEESNAGG-- 67

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                   GAA K     ++  S+ ++L  VF  A+  AFPE  D    +A  N     K
Sbjct: 68  --------GAASK----PKESSSITEHLESVFGQAIASAFPEFRDTPVIIAPVNSTSA-K 114

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN+AM L K  K+KG  K P DIA        +EL  +   + +I+K+E+A  GF
Sbjct: 115 FGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCPASPIIEKLEIAGAGF 166

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           VNVFLS+ YA   + +++ NGV PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+++
Sbjct: 167 VNVFLSKDYASSALSNLLRNGVTPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTIIGESL 225

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRFD
Sbjct: 226 CRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFD 285

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
           EDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ  
Sbjct: 286 EDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQSR 345

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
           M  +V YL  KGLLE+D+GR+IMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+EEE
Sbjct: 346 MLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEE 405

Query: 423 KADWIVYVTD 432
             DWI+YV D
Sbjct: 406 LCDWIIYVVD 415



 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/385 (56%), Positives = 280/385 (72%), Gaps = 25/385 (6%)

Query: 1066 IRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGD 1125
            ++ +IAEE    G          GAA K     ++  S+ ++L  VF  A+  AFPE  D
Sbjct: 55   LKKSIAEESNAGG----------GAASK----PKESSSITEHLESVFGQAIASAFPEFRD 100

Query: 1126 KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 1185
                +A  N     KFGD+QCN+AM L K  K+KG  K P DIA        +EL  +  
Sbjct: 101  TPVIIAPVNSTSA-KFGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCP 151

Query: 1186 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 1245
             + +I+K+E+A  GFVNVFLS+ YA   + +++ NGV PP + KK RVLVDFSSPNIAK+
Sbjct: 152  ASPIIEKLEIAGAGFVNVFLSKDYASSALSNLLRNGVTPPEVIKK-RVLVDFSSPNIAKQ 210

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRSTIIG+++ RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI
Sbjct: 211  MHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPI 270

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
            +DLQ FYKESKKRFDEDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL
Sbjct: 271  SDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERL 330

Query: 1366 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTY 1424
            ++++ ERGESFYQ  M  +V YL  KGLLE+D+GR+IMW +D +  IP+TIVKSDGGFTY
Sbjct: 331  DISVKERGESFYQSRMLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTY 390

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTD 1449
            DTSD+AAIR R+EEE  DWI+YV D
Sbjct: 391  DTSDMAAIRHRLEEELCDWIIYVVD 415


>gi|195384810|ref|XP_002051105.1| GJ14045 [Drosophila virilis]
 gi|194147562|gb|EDW63260.1| GJ14045 [Drosophila virilis]
          Length = 594

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/596 (59%), Positives = 447/596 (75%), Gaps = 12/596 (2%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            D  ++ ++L  VFT A+  A+P   +  A +A+ N     KFGD+QCN+AM L K  KD+
Sbjct: 5    DTFAITEHLEKVFTQAIATAYPRFSNVPAIIAAVNAS--PKFGDYQCNNAMGLSKKMKDE 62

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
            G  K+P DI   I     +        + +I+KIEVA PGFVN+FLS+ +A   +  ++ 
Sbjct: 63   GINKSPRDIGLEIQRCCPA--------SPIIEKIEVAGPGFVNIFLSKEFAVSSLTRMLR 114

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
             GV+PP + +K R+LVDFSSPNIAK+MHVGHLRSTIIG++ISRLLE+L HDV+R+NH+GD
Sbjct: 115  EGVKPPKVPRK-RILVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFLQHDVIRINHLGD 173

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGTQFGMLIAHL+D+FP++L +SPPI DLQ FYKESKKRFD DE FKKRAY  VV LQ  
Sbjct: 174  WGTQFGMLIAHLEDRFPNFLNESPPIGDLQEFYKESKKRFDADESFKKRAYNRVVTLQSG 233

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            +P   KAW+ ICDVSR++FQKIYDRL+VT+ ERGES+YQ  M  +V +L  KGLLELDDG
Sbjct: 234  EPAATKAWQQICDVSRKEFQKIYDRLDVTIQERGESYYQSRMLTVVEFLRNKGLLELDDG 293

Query: 773  RKIMWGE-DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            R+IMW + ++  IP+TIVKSDGGFTYDTSD+AAIR R+EE+ A W++YV D GQ  HF  
Sbjct: 294  REIMWPDVNKSGIPLTIVKSDGGFTYDTSDMAAIRCRLEEDLATWLIYVVDAGQSTHFHG 353

Query: 832  LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
            + + A++AGILNPN  R+D V FGVVLGED KKFKTRSGDTVKLS+LLDEGL+ SL +L+
Sbjct: 354  IFKAAERAGILNPNIHRVDHVQFGVVLGEDGKKFKTRSGDTVKLSDLLDEGLKYSLKQLQ 413

Query: 892  DKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
            ++ R   LTP EL EAQ+AVAYGCIKY DL HNR  DY+FSFDKMLDDRGNTAVYLLY Y
Sbjct: 414  ERGRDQILTPNELVEAQEAVAYGCIKYTDLCHNRISDYIFSFDKMLDDRGNTAVYLLYTY 473

Query: 952  TRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
            TRI SIAR +G +  +L        + LEHEKE+ L KTLL+++DVLM     L LH LC
Sbjct: 474  TRICSIARNSGEDFSNLAEILDKFQIVLEHEKEWKLVKTLLKLHDVLMKCANGLFLHFLC 533

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            E+ Y++ T F+EFYDNCYCIEK+  G+I  ++  R+L+ EATA V++ CF IL ++
Sbjct: 534  EFCYEVCTVFAEFYDNCYCIEKNKAGEICKINHSRILICEATAAVLRTCFHILGLK 589



 Score =  432 bits (1110), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/364 (57%), Positives = 269/364 (73%), Gaps = 15/364 (4%)

Query: 83  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           D  ++ ++L  VFT A+  A+P   +  A +A+ N     KFGD+QCN+AM L K  KD+
Sbjct: 5   DTFAITEHLEKVFTQAIATAYPRFSNVPAIIAAVNAS--PKFGDYQCNNAMGLSKKMKDE 62

Query: 143 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
           G  K+P DI   I     +        + +I+KIEVA PGFVN+FLS+ +A   +  ++ 
Sbjct: 63  GINKSPRDIGLEIQRCCPA--------SPIIEKIEVAGPGFVNIFLSKEFAVSSLTRMLR 114

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
            GV+PP + +K R+LVDFSSPNIAK+MHVGHLRSTIIG++ISRLLE+L HDV+R+NH+GD
Sbjct: 115 EGVKPPKVPRK-RILVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFLQHDVIRINHLGD 173

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGTQFGMLIAHL+D+FP++L +SPPI DLQ FYKESKKRFD DE FKKRAY  VV LQ  
Sbjct: 174 WGTQFGMLIAHLEDRFPNFLNESPPIGDLQEFYKESKKRFDADESFKKRAYNRVVTLQSG 233

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           +P   KAW+ ICDVSR++FQKIYDRL+VT+ ERGES+YQ  M  +V +L  KGLLELDDG
Sbjct: 234 EPAATKAWQQICDVSRKEFQKIYDRLDVTIQERGESYYQSRMLTVVEFLRNKGLLELDDG 293

Query: 383 RKIMWGE-DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQ 438
           R+IMW + ++  IP+TIVKSDGGFTYDTSD+AAIR R+EE+ A W++YV D      +H 
Sbjct: 294 REIMWPDVNKSGIPLTIVKSDGGFTYDTSDMAAIRCRLEEDLATWLIYVVDAGQSTHFHG 353

Query: 439 VLQA 442
           + +A
Sbjct: 354 IFKA 357



 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/351 (58%), Positives = 264/351 (75%), Gaps = 12/351 (3%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            D  ++ ++L  VFT A+  A+P   +  A +A+ N     KFGD+QCN+AM L K  KD+
Sbjct: 5    DTFAITEHLEKVFTQAIATAYPRFSNVPAIIAAVNAS--PKFGDYQCNNAMGLSKKMKDE 62

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
            G  K+P DI   I     +        + +I+KIEVA PGFVN+FLS+ +A   +  ++ 
Sbjct: 63   GINKSPRDIGLEIQRCCPA--------SPIIEKIEVAGPGFVNIFLSKEFAVSSLTRMLR 114

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
             GV+PP + +K R+LVDFSSPNIAK+MHVGHLRSTIIG++ISRLLE+L HDV+R+NH+GD
Sbjct: 115  EGVKPPKVPRK-RILVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFLQHDVIRINHLGD 173

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGTQFGMLIAHL+D+FP++L +SPPI DLQ FYKESKKRFD DE FKKRAY  VV LQ  
Sbjct: 174  WGTQFGMLIAHLEDRFPNFLNESPPIGDLQEFYKESKKRFDADESFKKRAYNRVVTLQSG 233

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            +P   KAW+ ICDVSR++FQKIYDRL+VT+ ERGES+YQ  M  +V +L  KGLLELDDG
Sbjct: 234  EPAATKAWQQICDVSRKEFQKIYDRLDVTIQERGESYYQSRMLTVVEFLRNKGLLELDDG 293

Query: 1400 RKIMWGE-DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            R+IMW + ++  IP+TIVKSDGGFTYDTSD+AAIR R+EE+ A W++YV D
Sbjct: 294  REIMWPDVNKSGIPLTIVKSDGGFTYDTSDMAAIRCRLEEDLATWLIYVVD 344


>gi|182892034|gb|AAI65718.1| Rars protein [Danio rerio]
          Length = 661

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/607 (58%), Positives = 463/607 (76%), Gaps = 13/607 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            +   ++MN   +  +++   L  +F  A+  A+P+L +   SV  + +    KFGD+QCN
Sbjct: 61   RSLQEEMNHNGKTMLNINQLLQQIFGEAISSAYPDLENPPLSVTPSQQA---KFGDYQCN 117

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AMA+ ++ K KG K +P +IA+ I   + +          +I+K E+A PGF+NV L R
Sbjct: 118  SAMAMSQMMKAKGLKVSPREIAEKIVQNIPNN--------DLIEKTEIAGPGFINVHLKR 169

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  + + +++VNGVQPP L KK +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+L
Sbjct: 170  NFVSKLLSNVLVNGVQPPPLQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFL 229

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G++V+RLNHVGDWGTQFGMLIAHLQDKFP+YL+ SPPI DLQAFYKESKKRFDEDE FKK
Sbjct: 230  GYEVLRLNHVGDWGTQFGMLIAHLQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKK 289

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAY+CVV LQ  + D+ KAW +ICDVSR++FQK+Y+ L++++ ERGES+YQ  M  +V  
Sbjct: 290  RAYKCVVKLQSREADFIKAWNLICDVSRKEFQKVYNCLDISIKERGESYYQDMMTAVVKE 349

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E+KGL+E+D+GRKI++   + SIP+TIVKSDGG+TYDTSDLAAIR R+ +EKAD I+YV
Sbjct: 350  FEEKGLVEVDEGRKIVFAPGQ-SIPLTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYV 408

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
            TD GQ +HF+++   A+  G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LL+
Sbjct: 409  TDSGQAMHFQVIFAAAQLIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLE 468

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LTP EL +AQ+AVA+GCIKYADLSHNR  DYVFSFDKMLDDR
Sbjct: 469  EGLKRSMDKLKEKERDKVLTPEELEKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLDDR 528

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I    LR AA++T V L+HEKE+ L K +LR  ++L  
Sbjct: 529  GNTAAYLLYAFTRIRSIARLANIQEAALRKAAETTDVILDHEKEWKLGKCILRFPEILQK 588

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +T DL LH LC+YLY+++T F+EFYD+CYC+EKD + G++  V+  R+LL EATA VM K
Sbjct: 589  ITDDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCEATAAVMAK 648

Query: 1060 CFDILNI 1066
             FDIL I
Sbjct: 649  GFDILGI 655



 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/410 (53%), Positives = 294/410 (71%), Gaps = 34/410 (8%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N++LK+RL IL+R++ EE                    MN   +  +++   L  +F  
Sbjct: 48  ENSRLKYRLNILKRSLQEE--------------------MNHNGKTMLNINQLLQQIFGE 87

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A+  A+P+L +   SV  + +    KFGD+QCN AMA+ ++ K KG K +P +IA+ I  
Sbjct: 88  AISSAYPDLENPPLSVTPSQQA---KFGDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQ 144

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVL 217
            + +          +I+K E+A PGF+NV L R +  + + +++VNGVQPP L KK +V+
Sbjct: 145 NIPNN--------DLIEKTEIAGPGFINVHLKRNFVSKLLSNVLVNGVQPPPLQKKKKVI 196

Query: 218 VDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDK 277
           VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG++V+RLNHVGDWGTQFGMLIAHLQDK
Sbjct: 197 VDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWGTQFGMLIAHLQDK 256

Query: 278 FPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           FP+YL+ SPPI DLQAFYKESKKRFDEDE FKKRAY+CVV LQ  + D+ KAW +ICDVS
Sbjct: 257 FPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYKCVVKLQSREADFIKAWNLICDVS 316

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 397
           R++FQK+Y+ L++++ ERGES+YQ  M  +V   E+KGL+E+D+GRKI++   + SIP+T
Sbjct: 317 RKEFQKVYNCLDISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRKIVFAPGQ-SIPLT 375

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIAE 445
           IVKSDGG+TYDTSDLAAIR R+ +EKAD I+YVTD     + QV+ A A+
Sbjct: 376 IVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYVTDSGQAMHFQVIFAAAQ 425



 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/388 (53%), Positives = 285/388 (73%), Gaps = 14/388 (3%)

Query: 1064 LNIRTAIAEE--EKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFP 1121
            LN+ ++  +E  E+   +   ++   +   ++MN   +  +++   L  +F  A+  A+P
Sbjct: 35   LNLTSSQLDELREENSRLKYRLNILKRSLQEEMNHNGKTMLNINQLLQQIFGEAISSAYP 94

Query: 1122 ELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELA 1181
            +L +   SV  + +    KFGD+QCN AMA+ ++ K KG K +P +IA+ I   + +   
Sbjct: 95   DLENPPLSVTPSQQA---KFGDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQNIPNN-- 149

Query: 1182 TNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPN 1241
                   +I+K E+A PGF+NV L R +  + + +++VNGVQPP L KK +V+VDFSSPN
Sbjct: 150  ------DLIEKTEIAGPGFINVHLKRNFVSKLLSNVLVNGVQPPPLQKKKKVIVDFSSPN 203

Query: 1242 IAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK 1301
            IAKEMHVGHLRSTIIGD++ RL E+LG++V+RLNHVGDWGTQFGMLIAHLQDKFP+YL+ 
Sbjct: 204  IAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWGTQFGMLIAHLQDKFPNYLSV 263

Query: 1302 SPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKI 1361
            SPPI DLQAFYKESKKRFDEDE FKKRAY+CVV LQ  + D+ KAW +ICDVSR++FQK+
Sbjct: 264  SPPIGDLQAFYKESKKRFDEDEEFKKRAYKCVVKLQSREADFIKAWNLICDVSRKEFQKV 323

Query: 1362 YDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGG 1421
            Y+ L++++ ERGES+YQ  M  +V   E+KGL+E+D+GRKI++   + SIP+TIVKSDGG
Sbjct: 324  YNCLDISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRKIVFAPGQ-SIPLTIVKSDGG 382

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +TYDTSDLAAIR R+ +EKAD I+YVTD
Sbjct: 383  YTYDTSDLAAIRNRLFDEKADIIIYVTD 410


>gi|66912037|gb|AAH97633.1| LOC733251 protein [Xenopus laevis]
          Length = 650

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/595 (58%), Positives = 458/595 (76%), Gaps = 15/595 (2%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +++   L +VF  A++ A+PEL +   +V  + +    KFGD+QCN AM + ++ K   +
Sbjct: 64   ININAQLQEVFGTAIRAAYPELQNAPLAVTPSQQP---KFGDYQCNSAMGITQMLKAMNQ 120

Query: 535  KKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
            K +P +IA  I  ++ T+EL         ++K+++A PGF+NV L + +  +Q+  ++VN
Sbjct: 121  KVSPREIADKIVKNIPTNEL---------VEKVDIAGPGFINVHLHKDFTSKQLSKLLVN 171

Query: 594  GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
            GVQPP + +K RV+VDFSSPNIAKEMHVGHLRSTIIG++I RL E++GHDV+RLNH+GDW
Sbjct: 172  GVQPPVIEEKKRVVVDFSSPNIAKEMHVGHLRSTIIGESICRLFEFVGHDVLRLNHLGDW 231

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKKRFDEDE FKKRAYQCVV LQ   
Sbjct: 232  GTQFGMLIAHLQDKFPDYLTISPPIGDLQSFYKESKKRFDEDEEFKKRAYQCVVQLQNKT 291

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
            PD  +AW +IC+VSRR+FQKIYD L++++ +RGESFYQ  M  +V   E+KGL+++D+GR
Sbjct: 292  PDIIQAWNLICEVSRREFQKIYDNLDISIIDRGESFYQDRMIGVVKEFEEKGLVQVDEGR 351

Query: 774  KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLE 833
            K+++     SIP+TIVKSDGGFTYDTSDLAA++QR++EEKAD ++YV D GQ +H + + 
Sbjct: 352  KVVFPPG-CSIPLTIVKSDGGFTYDTSDLAALKQRLQEEKADMLIYVIDSGQAIHMQNVF 410

Query: 834  ECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK 893
               +  G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LL+EGL+RS+DKLKDK
Sbjct: 411  SAGQMIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKDK 470

Query: 894  NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTR 953
             R T LTP EL  AQ++VA+GCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLYAYTR
Sbjct: 471  GRDTVLTPEELLAAQRSVAFGCIKYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYAYTR 530

Query: 954  IASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEY 1013
            I SIAR A I+ +DL  AA+ T V+LEHEKE+ L+K +LR  ++L  +  DL LH LC+Y
Sbjct: 531  IRSIARLANISDDDLHKAAKETEVTLEHEKEWKLSKCILRFPEILQKILEDLLLHTLCDY 590

Query: 1014 LYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LY+++T F+EFYDNCYC+EKD + G+I  V+  RLLL +A A VM K FDIL ++
Sbjct: 591  LYELATTFTEFYDNCYCVEKDRQTGQIIKVNMSRLLLCDAAAAVMAKGFDILGLK 645



 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/431 (51%), Positives = 309/431 (71%), Gaps = 36/431 (8%)

Query: 3   IKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGI 62
           ++E +++   +++  L   GF  ES T  +   + +N KLK+RL IL++++ EE+KK   
Sbjct: 4   LQETEIRSLAAEIERLKNCGF--ESETPSLEGLREENAKLKYRLNILRKSLLEEKKK--- 58

Query: 63  SSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH 122
                     ++K M       +++   L +VF  A++ A+PEL +   +V  + +    
Sbjct: 59  ----------SSKSM-------ININAQLQEVFGTAIRAAYPELQNAPLAVTPSQQP--- 98

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKP 181
           KFGD+QCN AM + ++ K   +K +P +IA  I  ++ T+EL         ++K+++A P
Sbjct: 99  KFGDYQCNSAMGITQMLKAMNQKVSPREIADKIVKNIPTNEL---------VEKVDIAGP 149

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           GF+NV L + +  +Q+  ++VNGVQPP + +K RV+VDFSSPNIAKEMHVGHLRSTIIG+
Sbjct: 150 GFINVHLHKDFTSKQLSKLLVNGVQPPVIEEKKRVVVDFSSPNIAKEMHVGHLRSTIIGE 209

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +I RL E++GHDV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKKR
Sbjct: 210 SICRLFEFVGHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTISPPIGDLQSFYKESKKR 269

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 361
           FDEDE FKKRAYQCVV LQ   PD  +AW +IC+VSRR+FQKIYD L++++ +RGESFYQ
Sbjct: 270 FDEDEEFKKRAYQCVVQLQNKTPDIIQAWNLICEVSRREFQKIYDNLDISIIDRGESFYQ 329

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 421
             M  +V   E+KGL+++D+GRK+++     SIP+TIVKSDGGFTYDTSDLAA++QR++E
Sbjct: 330 DRMIGVVKEFEEKGLVQVDEGRKVVFPPG-CSIPLTIVKSDGGFTYDTSDLAALKQRLQE 388

Query: 422 EKADWIVYVTD 432
           EKAD ++YV D
Sbjct: 389 EKADMLIYVID 399



 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/372 (55%), Positives = 278/372 (74%), Gaps = 21/372 (5%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
            +  S+  + K ++K M       +++   L +VF  A++ A+PEL +   +V  + +   
Sbjct: 48   LRKSLLEEKKKSSKSM-------ININAQLQEVFGTAIRAAYPELQNAPLAVTPSQQP-- 98

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAK 1197
             KFGD+QCN AM + ++ K   +K +P +IA  I  ++ T+EL         ++K+++A 
Sbjct: 99   -KFGDYQCNSAMGITQMLKAMNQKVSPREIADKIVKNIPTNEL---------VEKVDIAG 148

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            PGF+NV L + +  +Q+  ++VNGVQPP + +K RV+VDFSSPNIAKEMHVGHLRSTIIG
Sbjct: 149  PGFINVHLHKDFTSKQLSKLLVNGVQPPVIEEKKRVVVDFSSPNIAKEMHVGHLRSTIIG 208

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            ++I RL E++GHDV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKK
Sbjct: 209  ESICRLFEFVGHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTISPPIGDLQSFYKESKK 268

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
            RFDEDE FKKRAYQCVV LQ   PD  +AW +IC+VSRR+FQKIYD L++++ +RGESFY
Sbjct: 269  RFDEDEEFKKRAYQCVVQLQNKTPDIIQAWNLICEVSRREFQKIYDNLDISIIDRGESFY 328

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 1437
            Q  M  +V   E+KGL+++D+GRK+++     SIP+TIVKSDGGFTYDTSDLAA++QR++
Sbjct: 329  QDRMIGVVKEFEEKGLVQVDEGRKVVFPPG-CSIPLTIVKSDGGFTYDTSDLAALKQRLQ 387

Query: 1438 EEKADWIVYVTD 1449
            EEKAD ++YV D
Sbjct: 388  EEKADMLIYVID 399


>gi|387916052|gb|AFK11635.1| Arginyl-tRNA synthetase, cytoplasmic [Callorhinchus milii]
          Length = 660

 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/604 (58%), Positives = 457/604 (75%), Gaps = 14/604 (2%)

Query: 465  KKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMA 524
            +KMN P     ++ + L  +F  A+ VAFP+L +    VA   +    KFGD+QCN AMA
Sbjct: 65   EKMN-PGACLTNINETLQTIFRVAINVAFPDLENPPLVVAPNQQP---KFGDYQCNSAMA 120

Query: 525  LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 584
            + ++ K KG+K NP +IAQ+I + +           +VI+K+E+A PGF+NV L + +  
Sbjct: 121  IAQLLKSKGQKVNPREIAQNIVNSIPQN--------EVIEKLEIAGPGFINVHLKKDFVS 172

Query: 585  EQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 644
            + +  ++ +GVQPP++  K +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E++GHDV
Sbjct: 173  KLLTSLLKHGVQPPSIGPKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFVGHDV 232

Query: 645  VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 704
            +RLNHVGDWGTQFGMLIAHLQD+FP+Y   SPPI DLQAFYKESKKRFDE+E FKKRAYQ
Sbjct: 233  LRLNHVGDWGTQFGMLIAHLQDQFPNYQIISPPIGDLQAFYKESKKRFDEEEAFKKRAYQ 292

Query: 705  CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 764
            CVV LQ  DP+  KAW +IC+VSR++FQKIYDRL++TL ERGES+YQ  M+++V   E+ 
Sbjct: 293  CVVQLQAHDPNIIKAWNLICNVSRKEFQKIYDRLDITLIERGESYYQSMMKEVVKLFEEN 352

Query: 765  GLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLG 824
            G++ELD+GRKI++     S+P+TI KSDGG+TYDTSDLAA+RQRI +EKAD I+YV D G
Sbjct: 353  GIVELDEGRKIVFPPG-CSLPLTIEKSDGGYTYDTSDLAALRQRIFDEKADIIIYVVDNG 411

Query: 825  QGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
            Q VHF+ +   A+  G  +  KTR++  GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+
Sbjct: 412  QSVHFQTVFAAARLIGWFDSEKTRVEHAGFGVVLGEDKKKFKTRSGETVRLIDLLNEGLK 471

Query: 885  RSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
            RS+DKL +K R   LTP EL  AQ+AVA+GCIKYADLSHNR  DYVF FDKMLDDRGNTA
Sbjct: 472  RSMDKLVEKKRDKVLTPAELKAAQEAVAFGCIKYADLSHNRTNDYVFCFDKMLDDRGNTA 531

Query: 945  VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
             YLLYA+TRI SI RTA I+   L+ AA  T + L+HEKE+ L K +LR  +VL  +  D
Sbjct: 532  AYLLYAFTRIRSITRTANISPTTLQKAAAETTILLDHEKEWKLGKCILRFPEVLQKILED 591

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            L LH LC+YLYD++T F+EFYDNCYC+EKD + G++  V+  R+LL EATA VM+K F I
Sbjct: 592  LYLHSLCDYLYDLATTFTEFYDNCYCVEKDRQTGEVVKVNMWRMLLCEATAAVMEKSFHI 651

Query: 1064 LNIR 1067
            L +R
Sbjct: 652  LGLR 655



 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/437 (52%), Positives = 307/437 (70%), Gaps = 45/437 (10%)

Query: 7   KLKEFISKVNEL---STKGFISE--SATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQG 61
           ++K  ++++  L   ST GF S+    TE       +N KLK+R+ IL+R++ EE     
Sbjct: 18  EIKSLVAEIEGLKKPSTLGFTSQLGELTE-------ENAKLKYRINILKRSLQEE----- 65

Query: 62  ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 121
                         KMN P     ++ + L  +F  A+ VAFP+L +    VA   +   
Sbjct: 66  --------------KMN-PGACLTNINETLQTIFRVAINVAFPDLENPPLVVAPNQQP-- 108

Query: 122 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
            KFGD+QCN AMA+ ++ K KG+K NP +IAQ+I + +           +VI+K+E+A P
Sbjct: 109 -KFGDYQCNSAMAIAQLLKSKGQKVNPREIAQNIVNSIPQN--------EVIEKLEIAGP 159

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           GF+NV L + +  + +  ++ +GVQPP++  K +V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 160 GFINVHLKKDFVSKLLTSLLKHGVQPPSIGPKKKVVVDFSSPNIAKEMHVGHLRSTIIGD 219

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           ++ RL E++GHDV+RLNHVGDWGTQFGMLIAHLQD+FP+Y   SPPI DLQAFYKESKKR
Sbjct: 220 SMCRLFEFVGHDVLRLNHVGDWGTQFGMLIAHLQDQFPNYQIISPPIGDLQAFYKESKKR 279

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 361
           FDE+E FKKRAYQCVV LQ  DP+  KAW +IC+VSR++FQKIYDRL++TL ERGES+YQ
Sbjct: 280 FDEEEAFKKRAYQCVVQLQAHDPNIIKAWNLICNVSRKEFQKIYDRLDITLIERGESYYQ 339

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 421
             M+++V   E+ G++ELD+GRKI++     S+P+TI KSDGG+TYDTSDLAA+RQRI +
Sbjct: 340 SMMKEVVKLFEENGIVELDEGRKIVFPPG-CSLPLTIEKSDGGYTYDTSDLAALRQRIFD 398

Query: 422 EKADWIVYVTDH-RSYH 437
           EKAD I+YV D+ +S H
Sbjct: 399 EKADIIIYVVDNGQSVH 415



 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/425 (52%), Positives = 300/425 (70%), Gaps = 31/425 (7%)

Query: 1048 LLAEATAKVMKKCFDILNIRTAIAEEEKKQ--GISSSISSQTKGAAK------------- 1092
            L+AE TA++ ++  +I ++   I   +K    G +S +   T+  AK             
Sbjct: 4    LVAEYTARLKEQDKEIKSLVAEIEGLKKPSTLGFTSQLGELTEENAKLKYRINILKRSLQ 63

Query: 1093 --KMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAM 1150
              KMN P     ++ + L  +F  A+ VAFP+L +    VA   +    KFGD+QCN AM
Sbjct: 64   EEKMN-PGACLTNINETLQTIFRVAINVAFPDLENPPLVVAPNQQP---KFGDYQCNSAM 119

Query: 1151 ALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYA 1210
            A+ ++ K KG+K NP +IAQ+I + +           +VI+K+E+A PGF+NV L + + 
Sbjct: 120  AIAQLLKSKGQKVNPREIAQNIVNSIPQN--------EVIEKLEIAGPGFINVHLKKDFV 171

Query: 1211 GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 1270
             + +  ++ +GVQPP++  K +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E++GHD
Sbjct: 172  SKLLTSLLKHGVQPPSIGPKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFVGHD 231

Query: 1271 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 1330
            V+RLNHVGDWGTQFGMLIAHLQD+FP+Y   SPPI DLQAFYKESKKRFDE+E FKKRAY
Sbjct: 232  VLRLNHVGDWGTQFGMLIAHLQDQFPNYQIISPPIGDLQAFYKESKKRFDEEEAFKKRAY 291

Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 1390
            QCVV LQ  DP+  KAW +IC+VSR++FQKIYDRL++TL ERGES+YQ  M+++V   E+
Sbjct: 292  QCVVQLQAHDPNIIKAWNLICNVSRKEFQKIYDRLDITLIERGESYYQSMMKEVVKLFEE 351

Query: 1391 KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             G++ELD+GRKI++     S+P+TI KSDGG+TYDTSDLAA+RQRI +EKAD I+YV D+
Sbjct: 352  NGIVELDEGRKIVFPPG-CSLPLTIEKSDGGYTYDTSDLAALRQRIFDEKADIIIYVVDN 410

Query: 1451 -RSYH 1454
             +S H
Sbjct: 411  GQSVH 415


>gi|194894171|ref|XP_001978023.1| GG19367 [Drosophila erecta]
 gi|190649672|gb|EDV46950.1| GG19367 [Drosophila erecta]
          Length = 664

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/616 (57%), Positives = 460/616 (74%), Gaps = 15/616 (2%)

Query: 453  SSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH 512
            S +  S   G A K+    ++  S+ ++L  VF  A+  AFPE  D    +A  N     
Sbjct: 58   SIAEESNAAGGAPKL----KESSSITEHLESVFGQAIASAFPEFRDTPVIIAPVNSTSA- 112

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+QCN+AM L K  K+KG  K P DIA        +EL  +   + +I+K+E+A  G
Sbjct: 113  KFGDYQCNNAMGLSKKLKEKGISKAPRDIA--------TELKGHCPPSPLIEKLEIAGAG 164

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            FVNVFLS+ YA   + +++  GV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG++
Sbjct: 165  FVNVFLSKDYAASALSNLLRYGVEPPEV-KKRRVLVDFSSPNIAKQMHVGHLRSTIIGES 223

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + RLLE+L HDV+R NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRF
Sbjct: 224  LCRLLEFLQHDVIRTNHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRF 283

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 752
            DEDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ 
Sbjct: 284  DEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISIKERGESFYQS 343

Query: 753  HMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 811
             M  +V YL  KGLLE D+GRKIMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+EE
Sbjct: 344  RMLSVVEYLRGKGLLEEDEGRKIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRYRLEE 403

Query: 812  EKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGD 871
            E  DWI+YV D GQ  HF  + + A+++ ILNP   R+D V FGVVLGED KKFKTRSGD
Sbjct: 404  ELCDWIIYVVDAGQSTHFNTIFKAAERSTILNPLTHRVDHVQFGVVLGEDGKKFKTRSGD 463

Query: 872  TVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVF 931
            TVKL++LLDEGL+RSL +L+ + R   LTP EL +AQ+++AYGCIKY+DL HNR  DY+F
Sbjct: 464  TVKLADLLDEGLKRSLLQLESRGRDKVLTPQELKDAQESLAYGCIKYSDLCHNRISDYIF 523

Query: 932  SFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTL 991
            SFDKML+DRGNTAVYLLY YTRI SIAR  G +  +L    + T + L HEKE+ LAKTL
Sbjct: 524  SFDKMLEDRGNTAVYLLYTYTRICSIARNCGEDFSNLPEILKKTNIVLAHEKEWKLAKTL 583

Query: 992  LRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAE 1051
            L+++D+L+  +++L LH LCE+ +++ T F+EFYD+CYCIEK+ +G I  V+  R+LL E
Sbjct: 584  LKLHDILIKCSKELFLHFLCEFCFEVCTVFTEFYDSCYCIEKNKQGDIIAVNHSRILLCE 643

Query: 1052 ATAKVMKKCFDILNIR 1067
            ATA V+++CF IL ++
Sbjct: 644  ATAAVLRQCFYILGLK 659



 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/430 (54%), Positives = 304/430 (70%), Gaps = 29/430 (6%)

Query: 7   KLKEFISKVNELSTKGFISESATE---DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           KL+E   K   L+ +   +E   +   D++  Q++N KLK+RL IL+++IAEE       
Sbjct: 10  KLRELELKTQGLAARIQTAEHCEQLDVDLVQLQIENKKLKNRLFILKKSIAEE------- 62

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
               S   G A K+    ++  S+ ++L  VF  A+  AFPE  D    +A  N     K
Sbjct: 63  ----SNAAGGAPKL----KESSSITEHLESVFGQAIASAFPEFRDTPVIIAPVNSTSA-K 113

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN+AM L K  K+KG  K P DIA        +EL  +   + +I+K+E+A  GF
Sbjct: 114 FGDYQCNNAMGLSKKLKEKGISKAPRDIA--------TELKGHCPPSPLIEKLEIAGAGF 165

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           VNVFLS+ YA   + +++  GV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+++
Sbjct: 166 VNVFLSKDYAASALSNLLRYGVEPPEV-KKRRVLVDFSSPNIAKQMHVGHLRSTIIGESL 224

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RLLE+L HDV+R NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRFD
Sbjct: 225 CRLLEFLQHDVIRTNHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFD 284

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
           EDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ  
Sbjct: 285 EDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISIKERGESFYQSR 344

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
           M  +V YL  KGLLE D+GRKIMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+EEE
Sbjct: 345 MLSVVEYLRGKGLLEEDEGRKIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRYRLEEE 404

Query: 423 KADWIVYVTD 432
             DWI+YV D
Sbjct: 405 LCDWIIYVVD 414



 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/385 (56%), Positives = 278/385 (72%), Gaps = 26/385 (6%)

Query: 1066 IRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGD 1125
            ++ +IAEE           S   G A K+    ++  S+ ++L  VF  A+  AFPE  D
Sbjct: 55   LKKSIAEE-----------SNAAGGAPKL----KESSSITEHLESVFGQAIASAFPEFRD 99

Query: 1126 KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 1185
                +A  N     KFGD+QCN+AM L K  K+KG  K P DIA        +EL  +  
Sbjct: 100  TPVIIAPVNSTSA-KFGDYQCNNAMGLSKKLKEKGISKAPRDIA--------TELKGHCP 150

Query: 1186 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 1245
             + +I+K+E+A  GFVNVFLS+ YA   + +++  GV+PP + KK RVLVDFSSPNIAK+
Sbjct: 151  PSPLIEKLEIAGAGFVNVFLSKDYAASALSNLLRYGVEPPEV-KKRRVLVDFSSPNIAKQ 209

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRSTIIG+++ RLLE+L HDV+R NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI
Sbjct: 210  MHVGHLRSTIIGESLCRLLEFLQHDVIRTNHLGDWGTQFGMLIAHLEDRFPNYLNESPPI 269

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
            +DLQ FYKESKKRFDEDE FKKRAY  VV+LQ+  P+  KAWE+IC+VSR++FQ IY+RL
Sbjct: 270  SDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERL 329

Query: 1366 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTY 1424
            ++++ ERGESFYQ  M  +V YL  KGLLE D+GRKIMW +D +  IP+TIVKSDGGFTY
Sbjct: 330  DISIKERGESFYQSRMLSVVEYLRGKGLLEEDEGRKIMWPDDTKTGIPLTIVKSDGGFTY 389

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTD 1449
            DTSD+AAIR R+EEE  DWI+YV D
Sbjct: 390  DTSDMAAIRYRLEEELCDWIIYVVD 414


>gi|410914836|ref|XP_003970893.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Takifugu
            rubripes]
          Length = 660

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/593 (59%), Positives = 451/593 (76%), Gaps = 13/593 (2%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +++   L ++F  A++ ++PEL +   ++A   +    KFGD+QCN AMA+ ++ K KG 
Sbjct: 74   LNISQRLQEIFGLAIRTSYPELENPPLALAPNQQP---KFGDYQCNSAMAMAQMLKAKGM 130

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K NP +IA+ I       L  N    ++I K E+A PGF+N+ L R +  + +  +++ G
Sbjct: 131  KANPREIAERI----IRNLPDN----ELIQKTEIAGPGFINIHLKRAFVSKLLSKLLIKG 182

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            V PP L  + RV+VDFSSPNIAKEMHVGHLRSTIIGD++SRL E+LGHDV+RLNHVGDWG
Sbjct: 183  VTPPPLTSRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVGDWG 242

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHLQDKFPDYLT SPPI+DLQ FYKESKKRFDED+ FKKRAYQCVV LQ  +P
Sbjct: 243  TQFGMLIAHLQDKFPDYLTVSPPISDLQGFYKESKKRFDEDDGFKKRAYQCVVKLQSKEP 302

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            D+ KAW +ICDVSR++FQKIYD L++ L ERGES+YQ  M Q+V   E +G  +LD+GRK
Sbjct: 303  DFIKAWNLICDVSRQEFQKIYDCLDIKLIERGESYYQDLMTQVVKEAEDRGFAQLDEGRK 362

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            I++   + S+P+TIVKSDGG+TYDTSDLAAI QR+ EEKAD I+YVTD GQ  HF+++  
Sbjct: 363  IIFAPGQ-SLPLTIVKSDGGYTYDTSDLAAIHQRLFEEKADIIIYVTDSGQSSHFQVVFA 421

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A+  G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LL EGL+RS+DKLK+K 
Sbjct: 422  AAQMLGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLGEGLKRSMDKLKEKE 481

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            R   L+P EL +AQ+AVA+GCIKYADLSHNR  DYVFSFDKMLDDRGNTA YLLYA+TRI
Sbjct: 482  RDKVLSPDELVKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTRI 541

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
             SIAR A IN   LR  A+ST + L+HEKE+ L K +LR  +VL  +  DL LH LC+Y+
Sbjct: 542  RSIARLANINEATLRKEAESTEILLDHEKEWKLGKCILRFPEVLQKIQDDLLLHSLCDYV 601

Query: 1015 YDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            Y+++T F+EFYD+CYC+EKD + G++  V+  R+LL +ATA +M +CF IL +
Sbjct: 602  YELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCDATAAIMAQCFHILGL 654



 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/444 (52%), Positives = 304/444 (68%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +EL+++    ++  L        SA  + L  +  N++LK+R  IL RA+ EE  + G S
Sbjct: 15  QELQIQALSGEIESLKNSQNPGSSARLEELMEE--NSRLKYRFNILNRALQEERTRCGHS 72

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                        +N+  R        L ++F  A++ ++PEL +   ++A   +    K
Sbjct: 73  M------------LNISQR--------LQEIFGLAIRTSYPELENPPLALAPNQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AMA+ ++ K KG K NP +IA+ I       L  N    ++I K E+A PGF
Sbjct: 110 FGDYQCNSAMAMAQMLKAKGMKANPREIAERI----IRNLPDN----ELIQKTEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L R +  + +  +++ GV PP L  + RV+VDFSSPNIAKEMHVGHLRSTIIGD++
Sbjct: 162 INIHLKRAFVSKLLSKLLIKGVTPPPLTSRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+LGHDV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI+DLQ FYKESKKRFD
Sbjct: 222 SRLFEFLGHDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPISDLQGFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
           ED+ FKKRAYQCVV LQ  +PD+ KAW +ICDVSR++FQKIYD L++ L ERGES+YQ  
Sbjct: 282 EDDGFKKRAYQCVVKLQSKEPDFIKAWNLICDVSRQEFQKIYDCLDIKLIERGESYYQDL 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M Q+V   E +G  +LD+GRKI++   + S+P+TIVKSDGG+TYDTSDLAAI QR+ EEK
Sbjct: 342 MTQVVKEAEDRGFAQLDEGRKIIFAPGQ-SLPLTIVKSDGGYTYDTSDLAAIHQRLFEEK 400

Query: 424 ADWIVYVTD--HRSYHQVLQAIAE 445
           AD I+YVTD    S+ QV+ A A+
Sbjct: 401 ADIIIYVTDSGQSSHFQVVFAAAQ 424



 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/358 (58%), Positives = 269/358 (75%), Gaps = 14/358 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +++   L ++F  A++ ++PEL +   ++A   +    KFGD+QCN AMA+ ++ K KG 
Sbjct: 74   LNISQRLQEIFGLAIRTSYPELENPPLALAPNQQP---KFGDYQCNSAMAMAQMLKAKGM 130

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K NP +IA+ I       L  N    ++I K E+A PGF+N+ L R +  + +  +++ G
Sbjct: 131  KANPREIAERI----IRNLPDN----ELIQKTEIAGPGFINIHLKRAFVSKLLSKLLIKG 182

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            V PP L  + RV+VDFSSPNIAKEMHVGHLRSTIIGD++SRL E+LGHDV+RLNHVGDWG
Sbjct: 183  VTPPPLTSRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVGDWG 242

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQDKFPDYLT SPPI+DLQ FYKESKKRFDED+ FKKRAYQCVV LQ  +P
Sbjct: 243  TQFGMLIAHLQDKFPDYLTVSPPISDLQGFYKESKKRFDEDDGFKKRAYQCVVKLQSKEP 302

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D+ KAW +ICDVSR++FQKIYD L++ L ERGES+YQ  M Q+V   E +G  +LD+GRK
Sbjct: 303  DFIKAWNLICDVSRQEFQKIYDCLDIKLIERGESYYQDLMTQVVKEAEDRGFAQLDEGRK 362

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVL 1457
            I++   + S+P+TIVKSDGG+TYDTSDLAAI QR+ EEKAD I+YVTD    S+ QV+
Sbjct: 363  IIFAPGQ-SLPLTIVKSDGGYTYDTSDLAAIHQRLFEEKADIIIYVTDSGQSSHFQVV 419


>gi|395505046|ref|XP_003756857.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Sarcophilus harrisii]
          Length = 661

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/609 (58%), Positives = 460/609 (75%), Gaps = 14/609 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P +  +++   L ++F +A++VA+P+L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNRPTKSMININSRLQELFAYAIKVAYPDLENPPLIVTPSQQP---KFGDYQCN 116

Query: 521  DAMALCK-IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLS 579
             AM L K + K K EK NP DIA++IA      L  N    + I+K E+A PGF+NV L 
Sbjct: 117  SAMGLTKMLLKIKEEKINPRDIAENIAR----HLPDN----EYIEKYEIAGPGFINVHLR 168

Query: 580  RVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 639
            + +  +Q+  +++NGVQPP L ++ +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+
Sbjct: 169  KDFVSKQLTKLLINGVQPPALGERKKVVVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEF 228

Query: 640  LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFK 699
            +G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FK
Sbjct: 229  VGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFK 288

Query: 700  KRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVP 759
            KRAYQCVV LQ   PD  KAW +ICDVSR++F+KIYD L+++L ERGESFYQ  M  +V 
Sbjct: 289  KRAYQCVVQLQSKTPDITKAWNLICDVSRQEFKKIYDALDISLIERGESFYQDRMTDIVR 348

Query: 760  YLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
              E+KG +++DDGRKI++  +  SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+Y
Sbjct: 349  EFEEKGFVQVDDGRKIVFVPE-CSIPLTIVKSDGGYTYDTSDLAAIKQRLMEEKADMIIY 407

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
            V D GQ +HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSGDTV+L +LL
Sbjct: 408  VVDSGQALHFQTIFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGDTVRLIDLL 467

Query: 880  DEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDD 939
            +EGL+RS+DKLK+K R   LT  EL  AQ +VA+GCI+YADLSHNR  DY+FSFDKMLDD
Sbjct: 468  EEGLKRSMDKLKEKERDKVLTLEELKAAQTSVAFGCIRYADLSHNRMNDYIFSFDKMLDD 527

Query: 940  RGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLM 999
            RGNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L 
Sbjct: 528  RGNTAAYLLYAFTRIRSIARLANIDEEMLQKAAKETKIILDHEKEWKLGRCILRFPEILQ 587

Query: 1000 LVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMK 1058
             +  DL LH LC+YLY+++T F+EFYD+CYC+EKD + G+I  V+  R+LL EATA VM 
Sbjct: 588  KILDDLFLHTLCDYLYELATTFTEFYDSCYCVEKDRQTGEIVKVNMWRMLLCEATAAVMA 647

Query: 1059 KCFDILNIR 1067
            K FDIL I+
Sbjct: 648  KGFDILGIK 656



 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/430 (52%), Positives = 303/430 (70%), Gaps = 35/430 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G    S + + L  +  N+KLK+RL +LQ+++  E       
Sbjct: 15  QEKEIKFLTAEIDRLKNFGCTEISPSLEQLREE--NSKLKYRLNVLQKSLQAER------ 66

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                         N P +  +++   L ++F +A++VA+P+L +    V  + +    K
Sbjct: 67  --------------NRPTKSMININSRLQELFAYAIKVAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCK-IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           FGD+QCN AM L K + K K EK NP DIA++IA      L  N    + I+K E+A PG
Sbjct: 110 FGDYQCNSAMGLTKMLLKIKEEKINPRDIAENIAR----HLPDN----EYIEKYEIAGPG 161

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+NV L + +  +Q+  +++NGVQPP L ++ +V+VDFSSPNIAKEMHVGHLRSTIIG++
Sbjct: 162 FINVHLRKDFVSKQLTKLLINGVQPPALGERKKVVVDFSSPNIAKEMHVGHLRSTIIGES 221

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           +SRL E++G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRF
Sbjct: 222 MSRLFEFVGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRF 281

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
           D +E FKKRAYQCVV LQ   PD  KAW +ICDVSR++F+KIYD L+++L ERGESFYQ 
Sbjct: 282 DTEEEFKKRAYQCVVQLQSKTPDITKAWNLICDVSRQEFKKIYDALDISLIERGESFYQD 341

Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
            M  +V   E+KG +++DDGRKI++  +  SIP+TIVKSDGG+TYDTSDLAAI+QR+ EE
Sbjct: 342 RMTDIVREFEEKGFVQVDDGRKIVFVPE-CSIPLTIVKSDGGYTYDTSDLAAIKQRLMEE 400

Query: 423 KADWIVYVTD 432
           KAD I+YV D
Sbjct: 401 KADMIIYVVD 410



 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 211/356 (59%), Positives = 272/356 (76%), Gaps = 13/356 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P +  +++   L ++F +A++VA+P+L +    V  + +    KFGD+QCN AM L K
Sbjct: 67   NRPTKSMININSRLQELFAYAIKVAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGLTK 123

Query: 1155 -IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ 1213
             + K K EK NP DIA++IA      L  N    + I+K E+A PGF+NV L + +  +Q
Sbjct: 124  MLLKIKEEKINPRDIAENIAR----HLPDN----EYIEKYEIAGPGFINVHLRKDFVSKQ 175

Query: 1214 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
            +  +++NGVQPP L ++ +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E++G+DV+R
Sbjct: 176  LTKLLINGVQPPALGERKKVVVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFVGYDVLR 235

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            LNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCV
Sbjct: 236  LNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCV 295

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ   PD  KAW +ICDVSR++F+KIYD L+++L ERGESFYQ  M  +V   E+KG 
Sbjct: 296  VQLQSKTPDITKAWNLICDVSRQEFKKIYDALDISLIERGESFYQDRMTDIVREFEEKGF 355

Query: 1394 LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +++DDGRKI++  +  SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 356  VQVDDGRKIVFVPE-CSIPLTIVKSDGGYTYDTSDLAAIKQRLMEEKADMIIYVVD 410


>gi|387542956|gb|AFJ72105.1| arginyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 660

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/601 (58%), Positives = 455/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +   HKFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQ---HKFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTR+G+TV+L +L+ EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/429 (52%), Positives = 301/429 (70%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +   HK
Sbjct: 69  ----------------PTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQ---HK 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESV 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVQEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/355 (58%), Positives = 270/355 (76%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +   HKFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQ---HKFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 409


>gi|345307895|ref|XP_001509403.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Ornithorhynchus
            anatinus]
          Length = 696

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/609 (57%), Positives = 459/609 (75%), Gaps = 14/609 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K   ++ N P +  +++   L ++F +A++ A+P+L +   +V  + +    KFGD+QCN
Sbjct: 95   KSLQEERNKPTKSMININSRLQEIFGYAIKAAYPDLENPPLAVTPSQQS---KFGDYQCN 151

Query: 521  DAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLS 579
             AM++ ++  K K +K +P +IA+ I    T  L  N      IDK+E+A PGF+NV LS
Sbjct: 152  SAMSITQMLQKTKEQKVSPREIAEKI----TKNLPDN----DYIDKVEIAGPGFINVHLS 203

Query: 580  RVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 639
            + +  +Q+ +++VNGVQPP L +  +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+
Sbjct: 204  KSFVSKQLTNLLVNGVQPPALGEIKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEF 263

Query: 640  LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFK 699
            +G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FK
Sbjct: 264  VGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFK 323

Query: 700  KRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVP 759
            KRAYQCVV LQ   P+  KAW+MICDVSR++F KIYD L++++ ERGESFYQ  M  +V 
Sbjct: 324  KRAYQCVVLLQSKTPEITKAWKMICDVSRQEFNKIYDALDISIIERGESFYQDRMNDVVK 383

Query: 760  YLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
              E +G +E+DDGRKI++      +P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+Y
Sbjct: 384  EFEDRGFVEVDDGRKIVFVPG-CPVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANIIIY 442

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
            V D GQ VH + +   AK  G  +P +TR+   GFGVVLGED+KKFKTRSGDTV+L +LL
Sbjct: 443  VVDSGQSVHLQTVFAAAKMIGWYDPQETRVVHAGFGVVLGEDKKKFKTRSGDTVRLIDLL 502

Query: 880  DEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDD 939
            +EGL+RS+DKLK+K R   LTP EL  AQ +VA+GCIKYADLSHNR  DY+FSFDKMLDD
Sbjct: 503  EEGLKRSMDKLKEKERDKVLTPEELRTAQTSVAFGCIKYADLSHNRMNDYIFSFDKMLDD 562

Query: 940  RGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLM 999
            RGNTA YLLYA+TRI SIAR A I+ E LR AAQ T + L+HEKE+ L + +LR  ++L 
Sbjct: 563  RGNTAAYLLYAFTRIRSIARLANIDEEMLRKAAQETEILLDHEKEWKLGRCILRFPEILQ 622

Query: 1000 LVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMK 1058
             +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EATA +M 
Sbjct: 623  KILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKIVKVNMWRMLLCEATAAIMA 682

Query: 1059 KCFDILNIR 1067
            K FDIL I+
Sbjct: 683  KGFDILGIK 691



 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/452 (50%), Positives = 311/452 (68%), Gaps = 38/452 (8%)

Query: 2   SIKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQG 61
           + +E ++K   ++++ L  K F S   +  V   + +NTKLK+RL +L++++ EE  K  
Sbjct: 48  NCQEKEIKFLTAEIDRL--KNFGSLGVSPGVEQLRDENTKLKYRLNVLRKSLQEERNK-- 103

Query: 62  ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 121
                             P +  +++   L ++F +A++ A+P+L +   +V  + +   
Sbjct: 104 ------------------PTKSMININSRLQEIFGYAIKAAYPDLENPPLAVTPSQQS-- 143

Query: 122 HKFGDFQCNDAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 180
            KFGD+QCN AM++ ++  K K +K +P +IA+ I    T  L  N      IDK+E+A 
Sbjct: 144 -KFGDYQCNSAMSITQMLQKTKEQKVSPREIAEKI----TKNLPDN----DYIDKVEIAG 194

Query: 181 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           PGF+NV LS+ +  +Q+ +++VNGVQPP L +  +V+VDFSSPNIAKEMHVGHLRSTIIG
Sbjct: 195 PGFINVHLSKSFVSKQLTNLLVNGVQPPALGEIKKVVVDFSSPNIAKEMHVGHLRSTIIG 254

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 300
           D++ RL E++G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKK
Sbjct: 255 DSMCRLFEFVGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKK 314

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 360
           RFD +E FKKRAYQCVV LQ   P+  KAW+MICDVSR++F KIYD L++++ ERGESFY
Sbjct: 315 RFDTEEEFKKRAYQCVVLLQSKTPEITKAWKMICDVSRQEFNKIYDALDISIIERGESFY 374

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 420
           Q  M  +V   E +G +E+DDGRKI++      +P+TIVKSDGG+TYDTSDLAAI+QR+ 
Sbjct: 375 QDRMNDVVKEFEDRGFVEVDDGRKIVFVPG-CPVPLTIVKSDGGYTYDTSDLAAIKQRLF 433

Query: 421 EEKADWIVYVTDH-RSYHQVLQAIAEEEKKQG 451
           EEKA+ I+YV D  +S H  LQ +    K  G
Sbjct: 434 EEKANIIIYVVDSGQSVH--LQTVFAAAKMIG 463



 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/363 (56%), Positives = 272/363 (74%), Gaps = 13/363 (3%)

Query: 1088 KGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 1147
            K   ++ N P +  +++   L ++F +A++ A+P+L +   +V  + +    KFGD+QCN
Sbjct: 95   KSLQEERNKPTKSMININSRLQEIFGYAIKAAYPDLENPPLAVTPSQQS---KFGDYQCN 151

Query: 1148 DAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLS 1206
             AM++ ++  K K +K +P +IA+ I    T  L  N      IDK+E+A PGF+NV LS
Sbjct: 152  SAMSITQMLQKTKEQKVSPREIAEKI----TKNLPDN----DYIDKVEIAGPGFINVHLS 203

Query: 1207 RVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 1266
            + +  +Q+ +++VNGVQPP L +  +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+
Sbjct: 204  KSFVSKQLTNLLVNGVQPPALGEIKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEF 263

Query: 1267 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFK 1326
            +G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FK
Sbjct: 264  VGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFK 323

Query: 1327 KRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVP 1386
            KRAYQCVV LQ   P+  KAW+MICDVSR++F KIYD L++++ ERGESFYQ  M  +V 
Sbjct: 324  KRAYQCVVLLQSKTPEITKAWKMICDVSRQEFNKIYDALDISIIERGESFYQDRMNDVVK 383

Query: 1387 YLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 1446
              E +G +E+DDGRKI++      +P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+Y
Sbjct: 384  EFEDRGFVEVDDGRKIVFVPG-CPVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANIIIY 442

Query: 1447 VTD 1449
            V D
Sbjct: 443  VVD 445


>gi|45361659|ref|NP_989403.1| arginine--tRNA ligase, cytoplasmic [Xenopus (Silurana) tropicalis]
 gi|82186176|sp|Q6P1S4.1|SYRC_XENTR RecName: Full=Arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|40787810|gb|AAH64888.1| arginyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 660

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/598 (58%), Positives = 457/598 (76%), Gaps = 15/598 (2%)

Query: 472  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            +  +++   + ++F  A+  A+PEL +   +V  + +    KFGD+QCN AMA+ ++ K 
Sbjct: 71   KSMININAQIQEIFGTAIGAAYPELQNAPLAVTPSQQP---KFGDYQCNSAMAITQMLKA 127

Query: 532  KGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 590
              +K +P +IA  I  ++ T+EL         ++K+++A PGF+NV L + +  +QI  +
Sbjct: 128  MNQKVSPREIADKIVKNIPTNEL---------VEKVDIAGPGFINVHLHKDFTSKQISKL 178

Query: 591  IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
            +VNGVQPP + ++ +V+VDFSSPNIAKEMHVGHLRST+IGD+I RL E++GHDV+RLNH+
Sbjct: 179  LVNGVQPPVIWERKKVVVDFSSPNIAKEMHVGHLRSTVIGDSICRLFEFVGHDVLRLNHL 238

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKKRFDEDE FKKRAYQCVV LQ
Sbjct: 239  GDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKKRFDEDEEFKKRAYQCVVQLQ 298

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
               P++ +AW +ICDVSR++FQKIYD L++++ +RGESFYQ  M  +V   E+KGL+++D
Sbjct: 299  NKTPNFIQAWNLICDVSRKEFQKIYDCLDISIIDRGESFYQDRMIGVVKEFEEKGLVQVD 358

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            +GRK+++     S+P+TIVKSDGGFTYDTSDLAA++QR++EEKAD I+YV D GQ +H +
Sbjct: 359  EGRKVVFPPG-CSVPLTIVKSDGGFTYDTSDLAALKQRLQEEKADMIIYVIDSGQAIHMQ 417

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
             +    +  G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LLDEGL+RS++KL
Sbjct: 418  NVFSAGRMIGWYDPKVTRIEHAGFGVVLGEDKKKFKTRSGDTVRLIDLLDEGLKRSMEKL 477

Query: 891  KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            KDK R   LT  EL  AQ +VA+GCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLYA
Sbjct: 478  KDKGRDKVLTAEELLAAQTSVAFGCIKYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYA 537

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            YTRI SIAR A I+ EDL  AA+ T + LEHEKE+ L+K +LR  ++L  +  DL LH L
Sbjct: 538  YTRIRSIARLANISDEDLHKAAKETEIILEHEKEWKLSKCILRFPEILQKILDDLLLHTL 597

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            C+YLY+++T F+EFYDNCYC+EKD + G+I  V+  RLLL +ATA VM K FDIL I+
Sbjct: 598  CDYLYELATTFTEFYDNCYCVEKDRQTGQIVKVNMSRLLLCDATAAVMAKGFDILGIK 655



 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/430 (51%), Positives = 311/430 (72%), Gaps = 36/430 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   +++  L   GF+SE+ + + L  +  N KLK+RL IL++++ EE+KK    
Sbjct: 15  QETEIKSLAAEIERLKNCGFVSETPSLEGLREE--NAKLKYRLNILRKSLLEEKKK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                    ++K M       +++   + ++F  A+  A+PEL +   +V  + +    K
Sbjct: 69  ---------SSKSM-------ININAQIQEIFGTAIGAAYPELQNAPLAVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPG 182
           FGD+QCN AMA+ ++ K   +K +P +IA  I  ++ T+EL         ++K+++A PG
Sbjct: 110 FGDYQCNSAMAITQMLKAMNQKVSPREIADKIVKNIPTNEL---------VEKVDIAGPG 160

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+NV L + +  +QI  ++VNGVQPP + ++ +V+VDFSSPNIAKEMHVGHLRST+IGD+
Sbjct: 161 FINVHLHKDFTSKQISKLLVNGVQPPVIWERKKVVVDFSSPNIAKEMHVGHLRSTVIGDS 220

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           I RL E++GHDV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKKRF
Sbjct: 221 ICRLFEFVGHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKKRF 280

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
           DEDE FKKRAYQCVV LQ   P++ +AW +ICDVSR++FQKIYD L++++ +RGESFYQ 
Sbjct: 281 DEDEEFKKRAYQCVVQLQNKTPNFIQAWNLICDVSRKEFQKIYDCLDISIIDRGESFYQD 340

Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
            M  +V   E+KGL+++D+GRK+++     S+P+TIVKSDGGFTYDTSDLAA++QR++EE
Sbjct: 341 RMIGVVKEFEEKGLVQVDEGRKVVFPPG-CSVPLTIVKSDGGFTYDTSDLAALKQRLQEE 399

Query: 423 KADWIVYVTD 432
           KAD I+YV D
Sbjct: 400 KADMIIYVID 409



 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/372 (54%), Positives = 279/372 (75%), Gaps = 21/372 (5%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
            +  S+  + K ++K M       +++   + ++F  A+  A+PEL +   +V  + +   
Sbjct: 58   LRKSLLEEKKKSSKSM-------ININAQIQEIFGTAIGAAYPELQNAPLAVTPSQQP-- 108

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAK 1197
             KFGD+QCN AMA+ ++ K   +K +P +IA  I  ++ T+EL         ++K+++A 
Sbjct: 109  -KFGDYQCNSAMAITQMLKAMNQKVSPREIADKIVKNIPTNEL---------VEKVDIAG 158

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            PGF+NV L + +  +QI  ++VNGVQPP + ++ +V+VDFSSPNIAKEMHVGHLRST+IG
Sbjct: 159  PGFINVHLHKDFTSKQISKLLVNGVQPPVIWERKKVVVDFSSPNIAKEMHVGHLRSTVIG 218

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+I RL E++GHDV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKK
Sbjct: 219  DSICRLFEFVGHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKK 278

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
            RFDEDE FKKRAYQCVV LQ   P++ +AW +ICDVSR++FQKIYD L++++ +RGESFY
Sbjct: 279  RFDEDEEFKKRAYQCVVQLQNKTPNFIQAWNLICDVSRKEFQKIYDCLDISIIDRGESFY 338

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 1437
            Q  M  +V   E+KGL+++D+GRK+++     S+P+TIVKSDGGFTYDTSDLAA++QR++
Sbjct: 339  QDRMIGVVKEFEEKGLVQVDEGRKVVFPPG-CSVPLTIVKSDGGFTYDTSDLAALKQRLQ 397

Query: 1438 EEKADWIVYVTD 1449
            EEKAD I+YV D
Sbjct: 398  EEKADMIIYVID 409


>gi|213514264|ref|NP_001133937.1| Arginyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|209155884|gb|ACI34174.1| Arginyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 660

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/593 (58%), Positives = 455/593 (76%), Gaps = 13/593 (2%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++   L ++F  A++ A+P+L +   +V    +    KFGD+QCN AMA+ ++ K KG 
Sbjct: 74   MNINQRLQEIFGEAIREAWPDLENPPLAVTPNQQA---KFGDYQCNSAMAMAQMMKSKGL 130

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K NP +IA+ I   +           ++I+K E+A PGF+NV L R +  + + ++++NG
Sbjct: 131  KVNPREIAEKIQQNIPDN--------ELIEKTEIAGPGFINVHLKRSFVSKLLTNLLLNG 182

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            VQPP L +K +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG+DV+RLNHVGDWG
Sbjct: 183  VQPPPLERKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGDWG 242

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHLQDKFP+YLT SPPI DLQAFYKESKKRFDE+E FKKRAYQCVV LQ  DP
Sbjct: 243  TQFGMLIAHLQDKFPNYLTVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQCVVKLQSKDP 302

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
             + K W +ICDVSR++FQK+Y+ L++ + ERGESFYQ+ M  +V   E KGL+E+D+GRK
Sbjct: 303  AFIKGWNLICDVSRKEFQKVYNCLDIQIIERGESFYQEKMIAVVKEFEAKGLVEMDEGRK 362

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            I++   +  IP+T+VKSDGG+TYDTSDLAA+RQR+ +EKAD I+YVTD GQ  HF+++  
Sbjct: 363  IVFAPGQ-QIPLTVVKSDGGYTYDTSDLAALRQRLFDEKADIIIYVTDSGQATHFQVVFA 421

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A+  G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LLDEGL+RS+DKLK+K+
Sbjct: 422  AAQMIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLDEGLKRSMDKLKEKD 481

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            R   L+  EL++AQ +VA+GCIKYADLSHNR  DYVFSFDKMLDDRGNTA YLLYA+TRI
Sbjct: 482  RDKVLSTEELTKAQHSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTRI 541

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
             SIAR A I+   LR AA++T V L+H+KE+ L K L+R  ++L  +  DL LH LC+YL
Sbjct: 542  RSIARLANIDEVALRKAAETTDVLLQHDKEWKLGKCLMRFPEILQKILDDLLLHTLCDYL 601

Query: 1015 YDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            Y+++T F+EFYD+CYCIEKD + G++  V+  R+LL +ATA +M K FDIL I
Sbjct: 602  YELATTFTEFYDSCYCIEKDRQTGEVVKVNMWRMLLCDATAAIMAKGFDILGI 654



 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/410 (53%), Positives = 294/410 (71%), Gaps = 34/410 (8%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N KLK+RL IL+R++ EE  +              +K M       M++   L ++F  
Sbjct: 47  ENAKLKYRLNILKRSLQEERSQ-------------CSKTM-------MNINQRLQEIFGE 86

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A++ A+P+L +   +V    +    KFGD+QCN AMA+ ++ K KG K NP +IA+ I  
Sbjct: 87  AIREAWPDLENPPLAVTPNQQA---KFGDYQCNSAMAMAQMMKSKGLKVNPREIAEKIQQ 143

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVL 217
            +           ++I+K E+A PGF+NV L R +  + + ++++NGVQPP L +K +V+
Sbjct: 144 NIPDN--------ELIEKTEIAGPGFINVHLKRSFVSKLLTNLLLNGVQPPPLERKKKVV 195

Query: 218 VDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDK 277
           VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG+DV+RLNHVGDWGTQFGMLIAHLQDK
Sbjct: 196 VDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGDWGTQFGMLIAHLQDK 255

Query: 278 FPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           FP+YLT SPPI DLQAFYKESKKRFDE+E FKKRAYQCVV LQ  DP + K W +ICDVS
Sbjct: 256 FPNYLTVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQCVVKLQSKDPAFIKGWNLICDVS 315

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 397
           R++FQK+Y+ L++ + ERGESFYQ+ M  +V   E KGL+E+D+GRKI++   +  IP+T
Sbjct: 316 RKEFQKVYNCLDIQIIERGESFYQEKMIAVVKEFEAKGLVEMDEGRKIVFAPGQ-QIPLT 374

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIAE 445
           +VKSDGG+TYDTSDLAA+RQR+ +EKAD I+YVTD    ++ QV+ A A+
Sbjct: 375 VVKSDGGYTYDTSDLAALRQRLFDEKADIIIYVTDSGQATHFQVVFAAAQ 424



 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/417 (51%), Positives = 295/417 (70%), Gaps = 28/417 (6%)

Query: 1049 LAEATAKVMKKCFDILNIRTAIAEEEKKQ--GISSSISSQTKGAAK---KMNVPVRD--- 1100
            +AE ++++ ++  DI ++   I   +  Q  G+SS +    +  AK   ++N+  R    
Sbjct: 5    VAEYSSRLQQQEQDIHSLTAEIESLKNPQSLGLSSHLDGLREENAKLKYRLNILKRSLQE 64

Query: 1101 --------RMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL 1152
                     M++   L ++F  A++ A+P+L +   +V    +    KFGD+QCN AMA+
Sbjct: 65   ERSQCSKTMMNINQRLQEIFGEAIREAWPDLENPPLAVTPNQQA---KFGDYQCNSAMAM 121

Query: 1153 CKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGE 1212
             ++ K KG K NP +IA+ I   +           ++I+K E+A PGF+NV L R +  +
Sbjct: 122  AQMMKSKGLKVNPREIAEKIQQNIPDN--------ELIEKTEIAGPGFINVHLKRSFVSK 173

Query: 1213 QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 1272
             + ++++NGVQPP L +K +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG+DV+
Sbjct: 174  LLTNLLLNGVQPPPLERKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVL 233

Query: 1273 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 1332
            RLNHVGDWGTQFGMLIAHLQDKFP+YLT SPPI DLQAFYKESKKRFDE+E FKKRAYQC
Sbjct: 234  RLNHVGDWGTQFGMLIAHLQDKFPNYLTVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQC 293

Query: 1333 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 1392
            VV LQ  DP + K W +ICDVSR++FQK+Y+ L++ + ERGESFYQ+ M  +V   E KG
Sbjct: 294  VVKLQSKDPAFIKGWNLICDVSRKEFQKVYNCLDIQIIERGESFYQEKMIAVVKEFEAKG 353

Query: 1393 LLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            L+E+D+GRKI++   +  IP+T+VKSDGG+TYDTSDLAA+RQR+ +EKAD I+YVTD
Sbjct: 354  LVEMDEGRKIVFAPGQ-QIPLTVVKSDGGYTYDTSDLAALRQRLFDEKADIIIYVTD 409


>gi|334311444|ref|XP_003339619.1| PREDICTED: LOW QUALITY PROTEIN: arginyl-tRNA synthetase,
            cytoplasmic-like [Monodelphis domestica]
          Length = 662

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/589 (59%), Positives = 451/589 (76%), Gaps = 14/589 (2%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK-IFKDKGEKKNPF 539
            L ++F  A++ A+PELG     V  + +    KFGD+QCN AM L K + K + +K NP 
Sbjct: 81   LQELFACAIRGAYPELGSPPLIVTPSQQP---KFGDYQCNSAMGLSKMLLKTQEQKVNPR 137

Query: 540  DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 599
            +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  +Q+  +++NGVQPP 
Sbjct: 138  EIAENI----TRHLPDN----EYIEKVEIAGPGFINVHLRKDFVSKQLTKLLLNGVQPPA 189

Query: 600  LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
            L ++ +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E++G+DV+RLNHVGDWGTQFGM
Sbjct: 190  LGERKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFVGYDVLRLNHVGDWGTQFGM 249

Query: 660  LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 719
            LIAHLQDKFPDY+T SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ   PD  KA
Sbjct: 250  LIAHLQDKFPDYITVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVQLQSKMPDITKA 309

Query: 720  WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 779
            W +ICDVSRR+FQKIYD L+++L ERGESFYQ  M  +V   E+KG +++DDGRKI++  
Sbjct: 310  WNLICDVSRREFQKIYDALDISLIERGESFYQDRMTDIVKEFEEKGFVQVDDGRKIVFVP 369

Query: 780  DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKA 839
            +  S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ VHF+ +   A+  
Sbjct: 370  E-SSVPLTIVKSDGGYTYDTSDLAAIKQRLMEEKADIIIYVVDSGQAVHFQAIFAAAQMI 428

Query: 840  GILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTEL 899
            G  +P  TR+   GFGVVLGED+KKFKTRSGDTV+L +LL+EGL+RS+DKLK+K R   L
Sbjct: 429  GWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVL 488

Query: 900  TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR 959
            TP EL  AQ +VA+GCI+YADLSHNR  DY+FSFDKMLDDRGNTA YLLYA+TRI SIAR
Sbjct: 489  TPEELKAAQTSVAFGCIRYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIAR 548

Query: 960  TAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIST 1019
             A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH LC+Y+Y+++T
Sbjct: 549  LANIDEEMLQKAAKETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELAT 608

Query: 1020 AFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
             F+EFYD+CYC+EKD + GKI  V+  R+LL EATA +M K FDIL I+
Sbjct: 609  TFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEATAAIMAKGFDILGIK 657



 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/430 (52%), Positives = 301/430 (70%), Gaps = 34/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K    +++ L   G I  S + + L  +  N+KLK+RL +LQ+++ + E+ +   
Sbjct: 15  QEKEIKFLTEEIDRLKNFGCIGVSPSLEQLREE--NSKLKYRLKVLQKSL-QAERNRPTK 71

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
           S I  Q                     L ++F  A++ A+PELG     V  + +    K
Sbjct: 72  SMIXHQXAA------------------LQELFACAIRGAYPELGSPPLIVTPSQQP---K 110

Query: 124 FGDFQCNDAMALCK-IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           FGD+QCN AM L K + K + +K NP +IA++I    T  L  N    + I+K+E+A PG
Sbjct: 111 FGDYQCNSAMGLSKMLLKTQEQKVNPREIAENI----TRHLPDN----EYIEKVEIAGPG 162

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+NV L + +  +Q+  +++NGVQPP L ++ +V+VDFSSPNIAKEMHVGHLRSTIIG++
Sbjct: 163 FINVHLRKDFVSKQLTKLLLNGVQPPALGERKKVVVDFSSPNIAKEMHVGHLRSTIIGES 222

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + RL E++G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDY+T SPPI DLQAFYKESKKRF
Sbjct: 223 MCRLFEFVGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYITVSPPIGDLQAFYKESKKRF 282

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
           D +E FKKRAYQCVV LQ   PD  KAW +ICDVSRR+FQKIYD L+++L ERGESFYQ 
Sbjct: 283 DTEEEFKKRAYQCVVQLQSKMPDITKAWNLICDVSRREFQKIYDALDISLIERGESFYQD 342

Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
            M  +V   E+KG +++DDGRKI++  +  S+P+TIVKSDGG+TYDTSDLAAI+QR+ EE
Sbjct: 343 RMTDIVKEFEEKGFVQVDDGRKIVFVPE-SSVPLTIVKSDGGYTYDTSDLAAIKQRLMEE 401

Query: 423 KADWIVYVTD 432
           KAD I+YV D
Sbjct: 402 KADIIIYVVD 411



 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/343 (60%), Positives = 264/343 (76%), Gaps = 13/343 (3%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK-IFKDKGEKKNPF 1166
            L ++F  A++ A+PELG     V  + +    KFGD+QCN AM L K + K + +K NP 
Sbjct: 81   LQELFACAIRGAYPELGSPPLIVTPSQQP---KFGDYQCNSAMGLSKMLLKTQEQKVNPR 137

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 1226
            +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  +Q+  +++NGVQPP 
Sbjct: 138  EIAENI----TRHLPDN----EYIEKVEIAGPGFINVHLRKDFVSKQLTKLLLNGVQPPA 189

Query: 1227 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
            L ++ +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E++G+DV+RLNHVGDWGTQFGM
Sbjct: 190  LGERKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFVGYDVLRLNHVGDWGTQFGM 249

Query: 1287 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 1346
            LIAHLQDKFPDY+T SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ   PD  KA
Sbjct: 250  LIAHLQDKFPDYITVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVQLQSKMPDITKA 309

Query: 1347 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 1406
            W +ICDVSRR+FQKIYD L+++L ERGESFYQ  M  +V   E+KG +++DDGRKI++  
Sbjct: 310  WNLICDVSRREFQKIYDALDISLIERGESFYQDRMTDIVKEFEEKGFVQVDDGRKIVFVP 369

Query: 1407 DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +  S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 370  E-SSVPLTIVKSDGGYTYDTSDLAAIKQRLMEEKADIIIYVVD 411


>gi|357624515|gb|EHJ75259.1| putative arginyl-tRNA synthetase [Danaus plexippus]
          Length = 681

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/656 (55%), Positives = 473/656 (72%), Gaps = 20/656 (3%)

Query: 419  IEEEKADWIVYVTDHRSYHQ---VLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRM 475
            I +E+ D ++  +D+  Y     +LQ   E E+  G S  +S +       +N  +   +
Sbjct: 38   IGDERLDKLM--SDNEKYKHRLAILQNAIEVERSVGSSKKTSKKRPNLLNDIN-SIEGTI 94

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
             + D L ++F  A+  A+PEL D    +  +      KFGD+QCN AM + ++ K K  K
Sbjct: 95   CILDELKNIFEIAITSAYPELEDPPVVLTLSGNN--PKFGDYQCNSAMPISQLLKSKNIK 152

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
             NP ++A +I     +++  +P    +I+K EVA  GF+N++L+R +A   +  I+  GV
Sbjct: 153  TNPREVANNI----LNKMPASP----LIEKTEVAGAGFLNIYLNRAFAEHVLSCILRLGV 204

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            +PP + K+ R++VDFSSPNIAKEMHVGHLRSTIIGD+I R LE+L HDV+RLNH+GDWGT
Sbjct: 205  KPPPV-KRERIIVDFSSPNIAKEMHVGHLRSTIIGDSICRALEFLDHDVLRLNHLGDWGT 263

Query: 656  QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
            QFGMLIAHLQDK+P++ T SPPI+DLQAFYKESKKRFDEDE FKKRAY CVV LQ  DPD
Sbjct: 264  QFGMLIAHLQDKYPNFKTHSPPISDLQAFYKESKKRFDEDEEFKKRAYSCVVKLQSGDPD 323

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
            Y  AW++IC+VSR++FQKIYDRL++ + +RGESFYQ  ME++V  L+  G LE D+GR I
Sbjct: 324  YISAWKLICEVSRQEFQKIYDRLDIKIEDRGESFYQSRMEKIVKELKDGGYLEEDEGRLI 383

Query: 776  MWGE--DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLE 833
            MW +  +   IP+TIVKSDGG+TYDTSD+A IR R+EEEK D  +YVTD+GQ  HF L+E
Sbjct: 384  MWSDPNNHDGIPLTIVKSDGGYTYDTSDMATIRNRVEEEKGDRFIYVTDVGQYTHFVLIE 443

Query: 834  ECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK 893
             CA++ GIL   K +++ VGFGVVLGED+KKFKTRSGDT+KL +LLDEGL+R+LDKL +K
Sbjct: 444  ACARRFGILKDGK-KIEHVGFGVVLGEDKKKFKTRSGDTIKLIQLLDEGLKRALDKLVEK 502

Query: 894  NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTR 953
             R   LTP EL +AQ+AVAYGCIKYADLSHNR  DY+FSFDKMLDD+GNTAVYLLYA TR
Sbjct: 503  GRDKVLTPEELKQAQEAVAYGCIKYADLSHNRINDYIFSFDKMLDDKGNTAVYLLYALTR 562

Query: 954  IASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEY 1013
            I SIARTA I+++ L      +   L H+ E+ L K LLR  +V++ V  DL LH LCEY
Sbjct: 563  IRSIARTAQISTDKLLEEVHKSGFKLVHDAEWKLGKVLLRFPEVILKVANDLYLHSLCEY 622

Query: 1014 LYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTA 1069
            LY+IS+AF++FYD CYC+EKD  G +  +   RL+L E TA+VM++C DIL I+T 
Sbjct: 623  LYEISSAFTDFYDKCYCVEKDKSGNVVKILYERLMLCEVTARVMERCLDILGIKTV 678



 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/424 (53%), Positives = 292/424 (68%), Gaps = 16/424 (3%)

Query: 20  TKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNV 79
            KG +S    E +      N K KHRLAILQ AI E E+  G S   S +       +N 
Sbjct: 31  AKGDLSYIGDERLDKLMSDNEKYKHRLAILQNAI-EVERSVGSSKKTSKKRPNLLNDIN- 88

Query: 80  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 139
            +   + + D L ++F  A+  A+PEL D    +  +      KFGD+QCN AM + ++ 
Sbjct: 89  SIEGTICILDELKNIFEIAITSAYPELEDPPVVLTLSGNN--PKFGDYQCNSAMPISQLL 146

Query: 140 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 199
           K K  K NP ++A +I     +++  +P    +I+K EVA  GF+N++L+R +A   +  
Sbjct: 147 KSKNIKTNPREVANNI----LNKMPASP----LIEKTEVAGAGFLNIYLNRAFAEHVLSC 198

Query: 200 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
           I+  GV+PP + K+ R++VDFSSPNIAKEMHVGHLRSTIIGD+I R LE+L HDV+RLNH
Sbjct: 199 ILRLGVKPPPV-KRERIIVDFSSPNIAKEMHVGHLRSTIIGDSICRALEFLDHDVLRLNH 257

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           +GDWGTQFGMLIAHLQDK+P++ T SPPI+DLQAFYKESKKRFDEDE FKKRAY CVV L
Sbjct: 258 LGDWGTQFGMLIAHLQDKYPNFKTHSPPISDLQAFYKESKKRFDEDEEFKKRAYSCVVKL 317

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 379
           Q  DPDY  AW++IC+VSR++FQKIYDRL++ + +RGESFYQ  ME++V  L+  G LE 
Sbjct: 318 QSGDPDYISAWKLICEVSRQEFQKIYDRLDIKIEDRGESFYQSRMEKIVKELKDGGYLEE 377

Query: 380 DDGRKIMWGE--DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY- 436
           D+GR IMW +  +   IP+TIVKSDGG+TYDTSD+A IR R+EEEK D  +YVTD   Y 
Sbjct: 378 DEGRLIMWSDPNNHDGIPLTIVKSDGGYTYDTSDMATIRNRVEEEKGDRFIYVTDVGQYT 437

Query: 437 HQVL 440
           H VL
Sbjct: 438 HFVL 441



 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/387 (53%), Positives = 275/387 (71%), Gaps = 19/387 (4%)

Query: 1079 ISSSISSQTKGAAKKMNV-----PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVAST 1133
            +  S+ S  K + K+ N+      +   + + D L ++F  A+  A+PEL D    +  +
Sbjct: 66   VERSVGSSKKTSKKRPNLLNDINSIEGTICILDELKNIFEIAITSAYPELEDPPVVLTLS 125

Query: 1134 NEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKI 1193
                  KFGD+QCN AM + ++ K K  K NP ++A +I     +++  +P    +I+K 
Sbjct: 126  GNN--PKFGDYQCNSAMPISQLLKSKNIKTNPREVANNI----LNKMPASP----LIEKT 175

Query: 1194 EVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            EVA  GF+N++L+R +A   +  I+  GV+PP + K+ R++VDFSSPNIAKEMHVGHLRS
Sbjct: 176  EVAGAGFLNIYLNRAFAEHVLSCILRLGVKPPPV-KRERIIVDFSSPNIAKEMHVGHLRS 234

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD+I R LE+L HDV+RLNH+GDWGTQFGMLIAHLQDK+P++ T SPPI+DLQAFYK
Sbjct: 235  TIIGDSICRALEFLDHDVLRLNHLGDWGTQFGMLIAHLQDKYPNFKTHSPPISDLQAFYK 294

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
            ESKKRFDEDE FKKRAY CVV LQ  DPDY  AW++IC+VSR++FQKIYDRL++ + +RG
Sbjct: 295  ESKKRFDEDEEFKKRAYSCVVKLQSGDPDYISAWKLICEVSRQEFQKIYDRLDIKIEDRG 354

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            ESFYQ  ME++V  L+  G LE D+GR IMW +  +   IP+TIVKSDGG+TYDTSD+A 
Sbjct: 355  ESFYQSRMEKIVKELKDGGYLEEDEGRLIMWSDPNNHDGIPLTIVKSDGGYTYDTSDMAT 414

Query: 1432 IRQRIEEEKADWIVYVTDHRSY-HQVL 1457
            IR R+EEEK D  +YVTD   Y H VL
Sbjct: 415  IRNRVEEEKGDRFIYVTDVGQYTHFVL 441


>gi|90076908|dbj|BAE88134.1| unnamed protein product [Macaca fascicularis]
          Length = 660

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/601 (58%), Positives = 454/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTR+G+TV+L +L+ EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/429 (52%), Positives = 300/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVQEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  434 bits (1117), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/355 (58%), Positives = 269/355 (75%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 409


>gi|432952270|ref|XP_004085032.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Oryzias latipes]
          Length = 660

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/592 (59%), Positives = 454/592 (76%), Gaps = 13/592 (2%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            ++   L  VF  A++ +FPEL +   +V    +    KFGD+QCN AMA+ ++ K K +K
Sbjct: 75   NINQRLQQVFGRAIRTSFPELDNPPLAVTPNQQA---KFGDYQCNSAMAIAQMLKAKEQK 131

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
             NP +IA+ I       L  N    ++I + E+A PGF+N+ L + +  + + +++VNGV
Sbjct: 132  VNPREIAERI----LQNLPDN----ELIQRTEIAGPGFINIHLKKSFVSKLLSNLLVNGV 183

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            QPP L  + +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG+DV+RLNHVGDWGT
Sbjct: 184  QPPPLPSRKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGDWGT 243

Query: 656  QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
            QFGMLIAHLQDKFPDYL+ SPPI+DLQAFYKESKKRFDEDE FKKRAY+CVV LQ  +PD
Sbjct: 244  QFGMLIAHLQDKFPDYLSVSPPISDLQAFYKESKKRFDEDEDFKKRAYRCVVRLQSKEPD 303

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
            + +AW++ICDVSR++FQK+YD L+V L ERGESFYQ+ M Q+V   E KGL+ELD+GRK+
Sbjct: 304  FLRAWKLICDVSRKEFQKVYDCLDVKLIERGESFYQELMTQVVKEFEDKGLVELDEGRKL 363

Query: 776  MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
            ++   + SIP+TIVKSDGG+TYDTSDLAA+ QRI +EKAD I+YVTD GQ VHF+++   
Sbjct: 364  VFCPGQ-SIPLTIVKSDGGYTYDTSDLAALHQRIFQEKADIIIYVTDSGQAVHFQVVFAV 422

Query: 836  AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
            A+  G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LL+EGL+R  DKL +K R
Sbjct: 423  ARMIGWYDPQVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRCKDKLLEKER 482

Query: 896  HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIA 955
               LTP EL++AQ+AVA+GCIKYADLSHNR  DYVFSFDKMLDDRGNTA YLLYA+TRI 
Sbjct: 483  DKVLTPQELAKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTRIR 542

Query: 956  SIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLY 1015
            SIAR A I+   LR AA++T + L+HEKE+ L K +LR  ++L  +  DL LH LC++LY
Sbjct: 543  SIARLANIDEAALRRAAETTEILLDHEKEWKLGKCILRFPEILQKILDDLLLHALCDFLY 602

Query: 1016 DISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +++T F+EFYD+CYC+EKD   G++  ++  R+LL EATA +M + F IL I
Sbjct: 603  ELATTFTEFYDSCYCVEKDRRTGEVMKINMWRMLLCEATAAIMAQGFAILGI 654



 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/409 (54%), Positives = 294/409 (71%), Gaps = 34/409 (8%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N KLK+RL IL+R++ E+                 +K M        ++   L  VF  
Sbjct: 47  ENAKLKYRLNILKRSLQED-------------APPCSKSMT-------NINQRLQQVFGR 86

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A++ +FPEL +   +V    +    KFGD+QCN AMA+ ++ K K +K NP +IA+ I  
Sbjct: 87  AIRTSFPELDNPPLAVTPNQQA---KFGDYQCNSAMAIAQMLKAKEQKVNPREIAERI-- 141

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVL 217
                L  N    ++I + E+A PGF+N+ L + +  + + +++VNGVQPP L  + +V+
Sbjct: 142 --LQNLPDN----ELIQRTEIAGPGFINIHLKKSFVSKLLSNLLVNGVQPPPLPSRKKVV 195

Query: 218 VDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDK 277
           VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG+DV+RLNHVGDWGTQFGMLIAHLQDK
Sbjct: 196 VDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGDWGTQFGMLIAHLQDK 255

Query: 278 FPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           FPDYL+ SPPI+DLQAFYKESKKRFDEDE FKKRAY+CVV LQ  +PD+ +AW++ICDVS
Sbjct: 256 FPDYLSVSPPISDLQAFYKESKKRFDEDEDFKKRAYRCVVRLQSKEPDFLRAWKLICDVS 315

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 397
           R++FQK+YD L+V L ERGESFYQ+ M Q+V   E KGL+ELD+GRK+++   + SIP+T
Sbjct: 316 RKEFQKVYDCLDVKLIERGESFYQELMTQVVKEFEDKGLVELDEGRKLVFCPGQ-SIPLT 374

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIA 444
           IVKSDGG+TYDTSDLAA+ QRI +EKAD I+YVTD     + QV+ A+A
Sbjct: 375 IVKSDGGYTYDTSDLAALHQRIFQEKADIIIYVTDSGQAVHFQVVFAVA 423



 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/417 (52%), Positives = 296/417 (70%), Gaps = 28/417 (6%)

Query: 1049 LAEATAKVMKKCFDILNIRTAIAEEEKKQGISSS-----ISSQTKGAAKKMNV------- 1096
            ++E TA++ ++  +IL++   I   +  Q ++ S     +  +      ++N+       
Sbjct: 5    VSEHTARLQQQEREILSLSAEIQSLKNPQNLNLSPRLDELWEENAKLKYRLNILKRSLQE 64

Query: 1097 ---PVRDRMS-VRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL 1152
               P    M+ +   L  VF  A++ +FPEL +   +V    +    KFGD+QCN AMA+
Sbjct: 65   DAPPCSKSMTNINQRLQQVFGRAIRTSFPELDNPPLAVTPNQQA---KFGDYQCNSAMAI 121

Query: 1153 CKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGE 1212
             ++ K K +K NP +IA+ I       L  N    ++I + E+A PGF+N+ L + +  +
Sbjct: 122  AQMLKAKEQKVNPREIAERI----LQNLPDN----ELIQRTEIAGPGFINIHLKKSFVSK 173

Query: 1213 QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 1272
             + +++VNGVQPP L  + +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG+DV+
Sbjct: 174  LLSNLLVNGVQPPPLPSRKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVL 233

Query: 1273 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 1332
            RLNHVGDWGTQFGMLIAHLQDKFPDYL+ SPPI+DLQAFYKESKKRFDEDE FKKRAY+C
Sbjct: 234  RLNHVGDWGTQFGMLIAHLQDKFPDYLSVSPPISDLQAFYKESKKRFDEDEDFKKRAYRC 293

Query: 1333 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 1392
            VV LQ  +PD+ +AW++ICDVSR++FQK+YD L+V L ERGESFYQ+ M Q+V   E KG
Sbjct: 294  VVRLQSKEPDFLRAWKLICDVSRKEFQKVYDCLDVKLIERGESFYQELMTQVVKEFEDKG 353

Query: 1393 LLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            L+ELD+GRK+++   + SIP+TIVKSDGG+TYDTSDLAA+ QRI +EKAD I+YVTD
Sbjct: 354  LVELDEGRKLVFCPGQ-SIPLTIVKSDGGYTYDTSDLAALHQRIFQEKADIIIYVTD 409


>gi|386781525|ref|NP_001248147.1| arginine--tRNA ligase, cytoplasmic [Macaca mulatta]
 gi|355750404|gb|EHH54742.1| hypothetical protein EGM_15636 [Macaca fascicularis]
 gi|380815268|gb|AFE79508.1| arginyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
 gi|383414153|gb|AFH30290.1| arginyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 660

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/601 (58%), Positives = 454/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTR+G+TV+L +L+ EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 300/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESV 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVQEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/355 (58%), Positives = 269/355 (75%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 409


>gi|241121693|ref|XP_002403306.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215493415|gb|EEC03056.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 662

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/596 (60%), Positives = 443/596 (74%), Gaps = 20/596 (3%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASV-ASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            S RD L  +F  AV+ AFP++ D    V  S+NEK    FGD+QCN AM L +  K  G+
Sbjct: 80   SPRDVLLKLFRQAVRAAFPDVEDPLVPVLPSSNEK----FGDYQCNAAMPLSQALKKAGK 135

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              +P ++A+ I + V +          V+ ++ +A PGF+NV LS  Y     + I+ +G
Sbjct: 136  PMSPVEVAKRIVAEVPAN--------DVVAEMSLAGPGFINVTLSGSYVAASARRILTDG 187

Query: 595  V-QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
            V  PP    + RV+VD SSPNIAKEMHVGHLRSTIIG+++SRLLE++GHDV+RLNHVGDW
Sbjct: 188  VLPPPQAGPRKRVIVDLSSPNIAKEMHVGHLRSTIIGESLSRLLEFVGHDVLRLNHVGDW 247

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGMLIAHL+D+FPDYL  SPPI DLQAFYKESK RFD DE FKKRAY CVV LQ  D
Sbjct: 248  GTQFGMLIAHLKDRFPDYLVHSPPIGDLQAFYKESKVRFDSDEEFKKRAYACVVKLQSHD 307

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
            PD   AW++ICDVSR++FQKIY+RL+V+L ERGESFYQ  M ++V  L+++G LE DDGR
Sbjct: 308  PDMMSAWKLICDVSRQEFQKIYERLDVSLIERGESFYQDMMTEVVKDLDERGFLEEDDGR 367

Query: 774  KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLE 833
            K+M+G  +  +P+T+VKSDGGFTYDTSD+A IR R+++E+ADWIVYVTD GQ  HF  + 
Sbjct: 368  KVMFGPGQ-PVPLTVVKSDGGFTYDTSDMATIRHRVQQERADWIVYVTDAGQAQHFNTIF 426

Query: 834  ECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK 893
             CAKKAG ++ +K R+D   FGVVLGED+KKFKTRSGDTVKL++LLDEGLRRSL KL +K
Sbjct: 427  ACAKKAGYVDTSKVRLDHCVFGVVLGEDKKKFKTRSGDTVKLTDLLDEGLRRSLQKLHEK 486

Query: 894  NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTR 953
             R   LTP EL  AQ+AVAYGCIKYADLSHNR  +YVFSFD+MLDDRGNTA YLLYA TR
Sbjct: 487  EREKVLTPEELKRAQEAVAYGCIKYADLSHNRVHEYVFSFDRMLDDRGNTAAYLLYALTR 546

Query: 954  IASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEY 1013
            I SIAR  G++ + L+       V +EH KE  LAKTLLR  +V+  +  +L +H LC+Y
Sbjct: 547  IRSIARNVGMSVDALK----DEEVPVEHPKERKLAKTLLRFPEVISTMLEELHVHPLCDY 602

Query: 1014 LYDISTAFSEFYDNCYCIEKD-AEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            L+++S  FSEFYDNCYCIEKD A G++  V+ GRLLL EATA VM K F IL I+T
Sbjct: 603  LFELSQTFSEFYDNCYCIEKDKATGQVVKVNKGRLLLCEATAAVMTKGFHILGIKT 658



 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/404 (54%), Positives = 285/404 (70%), Gaps = 35/404 (8%)

Query: 31  DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDY 90
           +++A Q +N KLK+RL IL+R++ EEE K             + + M  P       RD 
Sbjct: 45  ELVALQTENAKLKYRLEILKRSVEEEESK-------------SKRFMESP-------RDV 84

Query: 91  LSDVFTHAVQVAFPELGDKTASV-ASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 149
           L  +F  AV+ AFP++ D    V  S+NEK    FGD+QCN AM L +  K  G+  +P 
Sbjct: 85  LLKLFRQAVRAAFPDVEDPLVPVLPSSNEK----FGDYQCNAAMPLSQALKKAGKPMSPV 140

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV-QPP 208
           ++A+ I + V +          V+ ++ +A PGF+NV LS  Y     + I+ +GV  PP
Sbjct: 141 EVAKRIVAEVPAN--------DVVAEMSLAGPGFINVTLSGSYVAASARRILTDGVLPPP 192

Query: 209 TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFG 268
               + RV+VD SSPNIAKEMHVGHLRSTIIG+++SRLLE++GHDV+RLNHVGDWGTQFG
Sbjct: 193 QAGPRKRVIVDLSSPNIAKEMHVGHLRSTIIGESLSRLLEFVGHDVLRLNHVGDWGTQFG 252

Query: 269 MLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 328
           MLIAHL+D+FPDYL  SPPI DLQAFYKESK RFD DE FKKRAY CVV LQ  DPD   
Sbjct: 253 MLIAHLKDRFPDYLVHSPPIGDLQAFYKESKVRFDSDEEFKKRAYACVVKLQSHDPDMMS 312

Query: 329 AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWG 388
           AW++ICDVSR++FQKIY+RL+V+L ERGESFYQ  M ++V  L+++G LE DDGRK+M+G
Sbjct: 313 AWKLICDVSRQEFQKIYERLDVSLIERGESFYQDMMTEVVKDLDERGFLEEDDGRKVMFG 372

Query: 389 EDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             +  +P+T+VKSDGGFTYDTSD+A IR R+++E+ADWIVYVTD
Sbjct: 373 PGQ-PVPLTVVKSDGGFTYDTSDMATIRHRVQQERADWIVYVTD 415



 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/349 (58%), Positives = 259/349 (74%), Gaps = 15/349 (4%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASV-ASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            S RD L  +F  AV+ AFP++ D    V  S+NEK    FGD+QCN AM L +  K  G+
Sbjct: 80   SPRDVLLKLFRQAVRAAFPDVEDPLVPVLPSSNEK----FGDYQCNAAMPLSQALKKAGK 135

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              +P ++A+ I + V +          V+ ++ +A PGF+NV LS  Y     + I+ +G
Sbjct: 136  PMSPVEVAKRIVAEVPAN--------DVVAEMSLAGPGFINVTLSGSYVAASARRILTDG 187

Query: 1222 V-QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
            V  PP    + RV+VD SSPNIAKEMHVGHLRSTIIG+++SRLLE++GHDV+RLNHVGDW
Sbjct: 188  VLPPPQAGPRKRVIVDLSSPNIAKEMHVGHLRSTIIGESLSRLLEFVGHDVLRLNHVGDW 247

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            GTQFGMLIAHL+D+FPDYL  SPPI DLQAFYKESK RFD DE FKKRAY CVV LQ  D
Sbjct: 248  GTQFGMLIAHLKDRFPDYLVHSPPIGDLQAFYKESKVRFDSDEEFKKRAYACVVKLQSHD 307

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
            PD   AW++ICDVSR++FQKIY+RL+V+L ERGESFYQ  M ++V  L+++G LE DDGR
Sbjct: 308  PDMMSAWKLICDVSRQEFQKIYERLDVSLIERGESFYQDMMTEVVKDLDERGFLEEDDGR 367

Query: 1401 KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            K+M+G  +  +P+T+VKSDGGFTYDTSD+A IR R+++E+ADWIVYVTD
Sbjct: 368  KVMFGPGQ-PVPLTVVKSDGGFTYDTSDMATIRHRVQQERADWIVYVTD 415


>gi|355691828|gb|EHH27013.1| hypothetical protein EGK_17110 [Macaca mulatta]
          Length = 660

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/601 (58%), Positives = 454/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFIPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTR+G+TV+L +L+ EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 300/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESV 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVQEFEDRGFVQVDDGRKIVFIPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/355 (58%), Positives = 269/355 (75%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFIPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 409


>gi|403290213|ref|XP_003936222.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Saimiri boliviensis
            boliviensis]
          Length = 660

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/601 (59%), Positives = 453/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K N  +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNTREIAENI----TKHLPDN----EYIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
             +++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I RL E+ G+DV+RL
Sbjct: 176  TNLLVNGVKLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESICRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW +ICDVSR++F KIYD L+VTL ERGESFYQ  M  +V  LE +G +
Sbjct: 296  LLQGKNPDIIKAWNLICDVSRQEFNKIYDALDVTLIERGESFYQDRMNDVVKELEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDSGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+
Sbjct: 415  HFQTVFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKQRDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 300/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L T    S  A+ ++   Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEKEIKSLTAEIDRLKTCA--SLGASPNLEQLQEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGHAIKAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K N  +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNTREIAENI----TKHLPDN----EYIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+ +++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTNLLVNGVKLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 CRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW +ICDVSR++F KIYD L+VTL ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDIIKAWNLICDVSRQEFNKIYDALDVTLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V  LE +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDVVKELEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/355 (58%), Positives = 268/355 (75%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K N  +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNTREIAENI----TKHLPDN----EYIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
             +++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I RL E+ G+DV+RL
Sbjct: 176  TNLLVNGVKLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESICRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW +ICDVSR++F KIYD L+VTL ERGESFYQ  M  +V  LE +G +
Sbjct: 296  LLQGKNPDIIKAWNLICDVSRQEFNKIYDALDVTLIERGESFYQDRMNDVVKELEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVD 409


>gi|586063|sp|P37880.1|SYRC_CRIGR RecName: Full=Arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|478315|pir||JN0870 arginine-tRNA ligase (EC 6.1.1.19) - Chinese hamster
 gi|433544|emb|CAA45012.1| arginine--tRNA ligase [Cricetulus longicaudatus]
          Length = 661

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/605 (58%), Positives = 457/605 (75%), Gaps = 13/605 (2%)

Query: 464  AKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAM 523
            A+K   P ++ +++   L DVF  A++ A+P+L +    V  + +    KFGD+QCN AM
Sbjct: 64   AEKRRRPTKNMININSRLQDVFGCAIKAAYPDLDNPPLVVTPSQQP---KFGDYQCNSAM 120

Query: 524  ALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYA 583
             + ++ K K +K NP  IA++I    T  L  N    + ID++E+A PGF+NV L + + 
Sbjct: 121  GISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFV 172

Query: 584  GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 643
             EQ+ +++VNG+Q P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+D
Sbjct: 173  SEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYD 232

Query: 644  VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 703
            V+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY
Sbjct: 233  VLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAY 292

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 763
            QCVV+LQ  DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E 
Sbjct: 293  QCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFED 352

Query: 764  KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
            KG +++DDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA+ I+YV D 
Sbjct: 353  KGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVDN 411

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ VHF+ +   A+  G  +P  T++  VGFGVVLGED+KKFKTRSG+TV+L +LL EGL
Sbjct: 412  GQAVHFQTIFAAAQMIGWYDPKVTQVTHVGFGVVLGEDKKKFKTRSGETVRLVDLLGEGL 471

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
            +RS+DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGNT
Sbjct: 472  KRSMDKLKEKERDKVLTEEELTAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNT 531

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A YLLYA+TRI SIAR A ++ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  
Sbjct: 532  AAYLLYAFTRIRSIARLANVDEEMLQKAARETKIVLDHEKEWKLGRCILRFPEILQKMLD 591

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFD 1062
            DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FD
Sbjct: 592  DLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFD 651

Query: 1063 ILNIR 1067
            IL I+
Sbjct: 652  ILGIK 656



 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/430 (52%), Positives = 305/430 (70%), Gaps = 33/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G + +S + D L  +  N KLK+RL ILQR++  E++++   
Sbjct: 15  QEKEIKSLTAEIDRLKNCGHLEDSPSLDQLREE--NLKLKYRLNILQRSLQAEKRRR--- 69

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L DVF  A++ A+P+L +    V  + +    K
Sbjct: 70  ----------------PTKNMININSRLQDVFGCAIKAAYPDLDNPPLVVTPSQQP---K 110

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP  IA++I    T  L  N    + ID++E+A PGF
Sbjct: 111 FGDYQCNSAMGISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGF 162

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+ +++VNG+Q P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 163 INVHLRKDFVSEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESM 222

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 223 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFD 282

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV+LQ  DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ  
Sbjct: 283 TEEEFKKRAYQCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDR 342

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M+ +V   E KG +++DDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEK
Sbjct: 343 MKDIVKEFEDKGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEK 401

Query: 424 ADWIVYVTDH 433
           A+ I+YV D+
Sbjct: 402 ANKIIYVVDN 411



 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/360 (58%), Positives = 272/360 (75%), Gaps = 12/360 (3%)

Query: 1091 AKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAM 1150
            A+K   P ++ +++   L DVF  A++ A+P+L +    V  + +    KFGD+QCN AM
Sbjct: 64   AEKRRRPTKNMININSRLQDVFGCAIKAAYPDLDNPPLVVTPSQQP---KFGDYQCNSAM 120

Query: 1151 ALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYA 1210
             + ++ K K +K NP  IA++I    T  L  N    + ID++E+A PGF+NV L + + 
Sbjct: 121  GISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFV 172

Query: 1211 GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 1270
             EQ+ +++VNG+Q P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+D
Sbjct: 173  SEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYD 232

Query: 1271 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 1330
            V+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY
Sbjct: 233  VLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAY 292

Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 1390
            QCVV+LQ  DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E 
Sbjct: 293  QCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFED 352

Query: 1391 KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            KG +++DDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 353  KGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVDN 411


>gi|354468259|ref|XP_003496584.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Cricetulus
            griseus]
          Length = 648

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/605 (58%), Positives = 457/605 (75%), Gaps = 13/605 (2%)

Query: 464  AKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAM 523
            A+K   P ++ +++   L DVF  A++ A+P+L +    V  + +    KFGD+QCN AM
Sbjct: 51   AEKRRRPTKNLININSRLQDVFGCAIKAAYPDLDNPPLVVTPSQQP---KFGDYQCNSAM 107

Query: 524  ALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYA 583
             + ++ K K +K NP  IA++I    T  L  N    + ID++E+A PGF+NV L + + 
Sbjct: 108  GISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFV 159

Query: 584  GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 643
             EQ+ +++VNG+Q P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+D
Sbjct: 160  SEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYD 219

Query: 644  VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 703
            V+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY
Sbjct: 220  VLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAY 279

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 763
            QCVV+LQ  DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E 
Sbjct: 280  QCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFED 339

Query: 764  KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
            KG +++DDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA+ I+YV D 
Sbjct: 340  KGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVDN 398

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ VHF+ +   A+  G  +P  T++  VGFGVVLGED+KKFKTRSG+TV+L +LL EGL
Sbjct: 399  GQAVHFQTIFAAAQMIGWYDPKVTQVTHVGFGVVLGEDKKKFKTRSGETVRLVDLLGEGL 458

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
            +RS+DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGNT
Sbjct: 459  KRSMDKLKEKERDKVLTEEELTAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNT 518

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A YLLYA+TRI SIAR A ++ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  
Sbjct: 519  AAYLLYAFTRIRSIARLANVDEEMLQKAARETKIVLDHEKEWKLGRCILRFPEILQKMLD 578

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFD 1062
            DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FD
Sbjct: 579  DLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFD 638

Query: 1063 ILNIR 1067
            IL I+
Sbjct: 639  ILGIK 643



 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/429 (52%), Positives = 304/429 (70%), Gaps = 33/429 (7%)

Query: 5   ELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISS 64
           E ++K   ++++ L   G + +S + D L  +  N KLK+RL ILQR++  E++++    
Sbjct: 3   EKEIKSLTAEIDRLKNCGHLEDSPSLDQLREE--NLKLKYRLNILQRSLQAEKRRR---- 56

Query: 65  SISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKF 124
                          P ++ +++   L DVF  A++ A+P+L +    V  + +    KF
Sbjct: 57  ---------------PTKNLININSRLQDVFGCAIKAAYPDLDNPPLVVTPSQQP---KF 98

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD+QCN AM + ++ K K +K NP  IA++I    T  L  N    + ID++E+A PGF+
Sbjct: 99  GDYQCNSAMGISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFI 150

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           NV L + +  EQ+ +++VNG+Q P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++S
Sbjct: 151 NVHLRKDFVSEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMS 210

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           RL E+ G+DV+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD 
Sbjct: 211 RLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDT 270

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 364
           +E FKKRAYQCVV+LQ  DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M
Sbjct: 271 EEEFKKRAYQCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRM 330

Query: 365 EQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKA 424
           + +V   E KG +++DDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA
Sbjct: 331 KDIVKEFEDKGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKA 389

Query: 425 DWIVYVTDH 433
           + I+YV D+
Sbjct: 390 NKIIYVVDN 398



 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/360 (58%), Positives = 272/360 (75%), Gaps = 12/360 (3%)

Query: 1091 AKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAM 1150
            A+K   P ++ +++   L DVF  A++ A+P+L +    V  + +    KFGD+QCN AM
Sbjct: 51   AEKRRRPTKNLININSRLQDVFGCAIKAAYPDLDNPPLVVTPSQQP---KFGDYQCNSAM 107

Query: 1151 ALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYA 1210
             + ++ K K +K NP  IA++I    T  L  N    + ID++E+A PGF+NV L + + 
Sbjct: 108  GISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFV 159

Query: 1211 GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 1270
             EQ+ +++VNG+Q P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+D
Sbjct: 160  SEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYD 219

Query: 1271 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 1330
            V+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY
Sbjct: 220  VLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAY 279

Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 1390
            QCVV+LQ  DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E 
Sbjct: 280  QCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFED 339

Query: 1391 KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            KG +++DDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 340  KGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVDN 398


>gi|119581911|gb|EAW61507.1| arginyl-tRNA synthetase [Homo sapiens]
          Length = 660

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/608 (58%), Positives = 455/608 (74%), Gaps = 13/608 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L +
Sbjct: 117  SAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ 
Sbjct: 169  DFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKK
Sbjct: 229  GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ VHF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL 
Sbjct: 408  VDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLG 467

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LT  EL+ AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDR
Sbjct: 468  EGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR 527

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  
Sbjct: 528  GNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQK 587

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++TAF+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K
Sbjct: 588  ILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAK 647

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 648  GFDILGIK 655



 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/444 (51%), Positives = 307/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/361 (58%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|15149476|ref|NP_002878.2| arginine--tRNA ligase, cytoplasmic [Homo sapiens]
 gi|20178331|sp|P54136.2|SYRC_HUMAN RecName: Full=Arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|12653513|gb|AAH00528.1| Arginyl-tRNA synthetase [Homo sapiens]
 gi|15779108|gb|AAH14619.1| Arginyl-tRNA synthetase [Homo sapiens]
 gi|30583627|gb|AAP36058.1| arginyl-tRNA synthetase [Homo sapiens]
 gi|61359156|gb|AAX41676.1| arginyl-tRNA synthetase [synthetic construct]
          Length = 660

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/608 (58%), Positives = 455/608 (74%), Gaps = 13/608 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L +
Sbjct: 117  SAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ 
Sbjct: 169  DFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKK
Sbjct: 229  GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ VHF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL 
Sbjct: 408  VDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLG 467

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LT  EL+ AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDR
Sbjct: 468  EGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR 527

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  
Sbjct: 528  GNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQK 587

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++TAF+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K
Sbjct: 588  ILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAK 647

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 648  GFDILGIK 655



 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/444 (51%), Positives = 307/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/361 (58%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|402873343|ref|XP_003900538.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Papio anubis]
          Length = 660

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/601 (58%), Positives = 453/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+++E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEQVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A   G  +P  TR+   GFGVVLGED+KKFKTR+G+TV+L +L+ EGL+RS+
Sbjct: 415  HFQTIFAAAHMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 300/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+++E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEQVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/355 (58%), Positives = 269/355 (75%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+++E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEQVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 409


>gi|47208421|emb|CAF89939.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 696

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/629 (56%), Positives = 456/629 (72%), Gaps = 49/629 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +++   L +VF  A++ +FPEL +   ++A   +    KFGD+QCN AMA+ ++ K KG 
Sbjct: 74   VNINQRLQEVFGLAIRTSFPELENPPLALAPNQQP---KFGDYQCNSAMAMAQMLKAKGV 130

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K NP +IA+ I    T  L  N    ++I K E+A PGF+N+ L R +  + +  +++NG
Sbjct: 131  KVNPREIAERI----TRNLPDN----ELIQKTEIAGPGFINIHLKRSFVSKLLSKLLING 182

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            V+PP L  + RV+VDFSSPNIAKEMHVGHLRSTIIGD++SRL E+LGHDV+RLNHVGDWG
Sbjct: 183  VKPPPLASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVGDWG 242

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFDEDE FKKRAYQCVV LQ  +P
Sbjct: 243  TQFGMLIAHLQDKFPDYLTASPPIGDLQAFYKESKKRFDEDEAFKKRAYQCVVKLQSKEP 302

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            D+ KAW +ICDVSR++FQKIYD L++ + ERGES+YQ  M  +V   E +G ++LD+GRK
Sbjct: 303  DFIKAWNLICDVSRQEFQKIYDCLDIKIIERGESYYQDLMTDVVKEAEDRGFVQLDEGRK 362

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            I++   + S+P+T+VKSDGG+TYDTSDLAA+RQR+ EEKAD I+YVTD GQG HF+++  
Sbjct: 363  IIFAPGQ-SLPLTVVKSDGGYTYDTSDLAALRQRLFEEKADTIIYVTDSGQGSHFQVVFA 421

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGED--------------------------------- 861
             A+  G  +P  TR++  GFGVVLGED                                 
Sbjct: 422  AAQMLGWYDPKVTRVEHAGFGVVLGEDKRLQRSRNRIRHRYPAPTSVLGLRAADVSSALP 481

Query: 862  ---RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
               RKKFKTRSG+TV+L +LLDEGL+RS+DKLK+K R   LT  EL +AQ+AVA+GCIKY
Sbjct: 482  NLPRKKFKTRSGETVRLMDLLDEGLKRSMDKLKEKERDQVLTADELVKAQRAVAFGCIKY 541

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLSHNR  DYVFSFDKMLDDRGNTA YLLYA+TRI SIAR A I+   LR  A ST + 
Sbjct: 542  ADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANIDEATLRKEAASTEIL 601

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-G 1037
            LEHEKE+ L K +LR  ++L+ +  DL LH LC+YLY+++T F+EFYD+CYC+EKD + G
Sbjct: 602  LEHEKEWKLGKCILRFPEILVKILDDLLLHSLCDYLYELATTFTEFYDSCYCVEKDRQTG 661

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            ++  V+  R+LL +ATA +M +CF IL +
Sbjct: 662  EVVKVNMWRMLLCDATAAIMAQCFHILGL 690



 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/444 (52%), Positives = 309/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +EL+++   +++  L      S SA  + L  +  N++LK+R  IL RA+ EE  + G +
Sbjct: 15  QELQIQALSAEIESLKNSQNASSSAELEALMEE--NSRLKYRFNILNRALQEERTRCGHA 72

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                                +++   L +VF  A++ +FPEL +   ++A   +    K
Sbjct: 73  M--------------------VNINQRLQEVFGLAIRTSFPELENPPLALAPNQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AMA+ ++ K KG K NP +IA+ I    T  L  N    ++I K E+A PGF
Sbjct: 110 FGDYQCNSAMAMAQMLKAKGVKVNPREIAERI----TRNLPDN----ELIQKTEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L R +  + +  +++NGV+PP L  + RV+VDFSSPNIAKEMHVGHLRSTIIGD++
Sbjct: 162 INIHLKRSFVSKLLSKLLINGVKPPPLASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+LGHDV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFLGHDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTASPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
           EDE FKKRAYQCVV LQ  +PD+ KAW +ICDVSR++FQKIYD L++ + ERGES+YQ  
Sbjct: 282 EDEAFKKRAYQCVVKLQSKEPDFIKAWNLICDVSRQEFQKIYDCLDIKIIERGESYYQDL 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G ++LD+GRKI++   + S+P+T+VKSDGG+TYDTSDLAA+RQR+ EEK
Sbjct: 342 MTDVVKEAEDRGFVQLDEGRKIIFAPGQ-SLPLTVVKSDGGYTYDTSDLAALRQRLFEEK 400

Query: 424 ADWIVYVTD--HRSYHQVLQAIAE 445
           AD I+YVTD    S+ QV+ A A+
Sbjct: 401 ADTIIYVTDSGQGSHFQVVFAAAQ 424



 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/358 (59%), Positives = 273/358 (76%), Gaps = 14/358 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +++   L +VF  A++ +FPEL +   ++A   +    KFGD+QCN AMA+ ++ K KG 
Sbjct: 74   VNINQRLQEVFGLAIRTSFPELENPPLALAPNQQP---KFGDYQCNSAMAMAQMLKAKGV 130

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K NP +IA+ I    T  L  N    ++I K E+A PGF+N+ L R +  + +  +++NG
Sbjct: 131  KVNPREIAERI----TRNLPDN----ELIQKTEIAGPGFINIHLKRSFVSKLLSKLLING 182

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            V+PP L  + RV+VDFSSPNIAKEMHVGHLRSTIIGD++SRL E+LGHDV+RLNHVGDWG
Sbjct: 183  VKPPPLASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVGDWG 242

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFDEDE FKKRAYQCVV LQ  +P
Sbjct: 243  TQFGMLIAHLQDKFPDYLTASPPIGDLQAFYKESKKRFDEDEAFKKRAYQCVVKLQSKEP 302

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D+ KAW +ICDVSR++FQKIYD L++ + ERGES+YQ  M  +V   E +G ++LD+GRK
Sbjct: 303  DFIKAWNLICDVSRQEFQKIYDCLDIKIIERGESYYQDLMTDVVKEAEDRGFVQLDEGRK 362

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVL 1457
            I++   + S+P+T+VKSDGG+TYDTSDLAA+RQR+ EEKAD I+YVTD    S+ QV+
Sbjct: 363  IIFAPGQ-SLPLTVVKSDGGYTYDTSDLAALRQRLFEEKADTIIYVTDSGQGSHFQVV 419


>gi|90077474|dbj|BAE88417.1| unnamed protein product [Macaca fascicularis]
          Length = 660

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/608 (57%), Positives = 455/608 (74%), Gaps = 13/608 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L +
Sbjct: 117  SAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  EQ+  ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ 
Sbjct: 169  DFVSEQLTSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKK
Sbjct: 229  GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSRR+F KIYD L+V+L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQGKNPDITKAWKLICDVSRREFNKIYDALDVSLIERGESFYQDRMNDIVQE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ VHF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTR+G+TV+L +L+ 
Sbjct: 408  VDSGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMG 467

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LT  EL+ AQ ++AY CIKYADLSHNR  DY+FSFDKMLDDR
Sbjct: 468  EGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYDCIKYADLSHNRLNDYIFSFDKMLDDR 527

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  
Sbjct: 528  GNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQK 587

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K
Sbjct: 588  ILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAK 647

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 648  GFDILGIK 655



 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/429 (52%), Positives = 300/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESV 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSRR+F KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRREFNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVQEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/355 (58%), Positives = 269/355 (75%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSRR+F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRREFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 409


>gi|410217174|gb|JAA05806.1| arginyl-tRNA synthetase [Pan troglodytes]
 gi|410264500|gb|JAA20216.1| arginyl-tRNA synthetase [Pan troglodytes]
 gi|410333159|gb|JAA35526.1| arginyl-tRNA synthetase [Pan troglodytes]
          Length = 660

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/608 (58%), Positives = 454/608 (74%), Gaps = 13/608 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L +
Sbjct: 117  SAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ 
Sbjct: 169  DFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKK
Sbjct: 229  GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ VHF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL 
Sbjct: 408  VDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLG 467

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LT  EL+ AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDR
Sbjct: 468  EGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR 527

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  
Sbjct: 528  GNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQK 587

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K
Sbjct: 588  ILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAK 647

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 648  GFDILGIK 655



 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/444 (51%), Positives = 307/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/361 (58%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|431918122|gb|ELK17350.1| Protein WWC1 [Pteropus alecto]
          Length = 1777

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/601 (58%), Positives = 451/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 1184 NRPTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 1240

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA+SI    T  L  N    + I+K+E+A PGF+NV L + +   Q+
Sbjct: 1241 MLKTKEQKVNPREIAESI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSGQL 1292

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
             +++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RL
Sbjct: 1293 TNLLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRL 1352

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 1353 NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 1412

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E KG +
Sbjct: 1413 LLQSKNPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDIVKEFEDKGFV 1472

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKA  I+YV D GQ V
Sbjct: 1473 QVDDGRKIIFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKAHMIIYVVDSGQSV 1531

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+
Sbjct: 1532 HFQTIFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSM 1591

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 1592 DKLKEKERDKVLTAEELKTAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 1651

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A ++ E L+ AAQ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 1652 LYAFTRIRSIARLANVDEEMLQKAAQETKIILDHEKEWKLGRCILRFPEILQKILDDLFL 1711

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I
Sbjct: 1712 HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGI 1771

Query: 1067 R 1067
            +
Sbjct: 1772 K 1772



 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/430 (51%), Positives = 298/430 (69%), Gaps = 34/430 (7%)

Query: 3    IKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGI 62
            +KE ++K   ++++ L   G +  S   + L  Q +N KLK+RL IL++++  E      
Sbjct: 1131 LKEKEIKSLTAEIDRLKNCGCLEASPNLEQL--QEENLKLKYRLNILRKSLQAER----- 1183

Query: 63   SSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH 122
                           N P ++ +++   L +VF  A++ A+P+L +    V  + +    
Sbjct: 1184 ---------------NRPTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP--- 1225

Query: 123  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
            KFGD+QCN AM + ++ K K +K NP +IA+SI    T  L  N    + I+K+E+A PG
Sbjct: 1226 KFGDYQCNSAMGISQMLKTKEQKVNPREIAESI----TKHLPDN----ECIEKVEIAGPG 1277

Query: 183  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
            F+NV L + +   Q+ +++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++
Sbjct: 1278 FINVHLRKDFVSGQLTNLLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGES 1337

Query: 243  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
            + RL E+ G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRF
Sbjct: 1338 MCRLFEFAGYDVLRLNHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRF 1397

Query: 303  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
            D +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ 
Sbjct: 1398 DTEEEFKKRAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQD 1457

Query: 363  HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
             M  +V   E KG +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EE
Sbjct: 1458 RMNDIVKEFEDKGFVQVDDGRKIIFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEE 1516

Query: 423  KADWIVYVTD 432
            KA  I+YV D
Sbjct: 1517 KAHMIIYVVD 1526



 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/355 (57%), Positives = 266/355 (74%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 1184 NRPTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 1240

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA+SI    T  L  N    + I+K+E+A PGF+NV L + +   Q+
Sbjct: 1241 MLKTKEQKVNPREIAESI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSGQL 1292

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
             +++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RL
Sbjct: 1293 TNLLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRL 1352

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 1353 NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 1412

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E KG +
Sbjct: 1413 LLQSKNPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDIVKEFEDKGFV 1472

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKA  I+YV D
Sbjct: 1473 QVDDGRKIIFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKAHMIIYVVD 1526


>gi|195041309|ref|XP_001991229.1| GH12545 [Drosophila grimshawi]
 gi|193900987|gb|EDV99853.1| GH12545 [Drosophila grimshawi]
          Length = 668

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/597 (58%), Positives = 448/597 (75%), Gaps = 12/597 (2%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            D +S+ ++L  VFT A+  A+P   +    VA+ N     KFGD+QCN+AM L K  K+ 
Sbjct: 79   DELSITEHLEKVFTKAIATAYPSFSNVPVVVAAVNGP--SKFGDYQCNNAMGLVKKLKEA 136

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
            G  K+P +IA  I              + +I KIEVA  GF+NVFLS+ YA   I +++ 
Sbjct: 137  GINKSPREIAAEIQKCCPD--------SPIIKKIEVAGAGFINVFLSKEYAVNSIINMLR 188

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            +GV+PP + +K RVLVDFSSPNIAK+MHVGHLRSTIIG++ISRLLE++ HDV+R+NH+GD
Sbjct: 189  DGVKPPRVPRK-RVLVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFMQHDVIRINHLGD 247

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGTQFGMLIAHL+D FP+++ +SPPI DLQ FYKESKKRFD D+ FKKRAY  VV+LQ  
Sbjct: 248  WGTQFGMLIAHLEDCFPNFVNESPPIGDLQEFYKESKKRFDADDNFKKRAYNRVVSLQSG 307

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            DP   KAW++ICDVSR++FQKIYDRL+VT+TERGESFYQ  M  +V  L  K LLELD+G
Sbjct: 308  DPKSTKAWQLICDVSRKEFQKIYDRLDVTITERGESFYQSRMLAIVELLRSKNLLELDEG 367

Query: 773  RKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            R+IMW +D +  IP+T+VKSDGGFTYDTSD+AAIR RIEE+ A WI+YV D GQ  HF  
Sbjct: 368  REIMWTDDSKSGIPLTVVKSDGGFTYDTSDMAAIRHRIEEDLAIWIIYVVDSGQSTHFNT 427

Query: 832  LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
            + + A++ GILNPN  R+D V FGVVLGED KKFKTRSGDTVKLS+LLDEG++ SL +L+
Sbjct: 428  IFKAAERCGILNPNVHRVDHVQFGVVLGEDGKKFKTRSGDTVKLSDLLDEGMKYSLKQLQ 487

Query: 892  DKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
            ++ R   LT TEL EAQ+AVAYGCIKY DL HNR  DYVFSF+KMLDDRGNTAVYLLY Y
Sbjct: 488  ERGRDQILTHTELVEAQEAVAYGCIKYTDLCHNRISDYVFSFEKMLDDRGNTAVYLLYTY 547

Query: 952  TRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
            TRI SIAR +G +  ++        + L+HEKE+ LAKTLL+ +DVL+     L LH LC
Sbjct: 548  TRICSIARNSGEDFSNVAAILDKYNLELDHEKEWKLAKTLLKFHDVLIKCANGLFLHFLC 607

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            E+ Y++ +AF+EFYD+CYCIEK+ +GKI  ++  R+L+ EATA +++ CF IL ++T
Sbjct: 608  EFCYEVCSAFTEFYDSCYCIEKNKDGKIIKINHSRILICEATAALLRTCFKILGLKT 664



 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/403 (55%), Positives = 287/403 (71%), Gaps = 28/403 (6%)

Query: 31  DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDY 90
           D++  QL NTKLK RLAI++++I EE K                    + + D +S+ ++
Sbjct: 43  DLIKLQLVNTKLKQRLAIIKQSIVEENKTNP----------------EMHLDDELSITEH 86

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L  VFT A+  A+P   +    VA+ N     KFGD+QCN+AM L K  K+ G  K+P +
Sbjct: 87  LEKVFTKAIATAYPSFSNVPVVVAAVNGP--SKFGDYQCNNAMGLVKKLKEAGINKSPRE 144

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 210
           IA  I              + +I KIEVA  GF+NVFLS+ YA   I +++ +GV+PP +
Sbjct: 145 IAAEIQKCCPD--------SPIIKKIEVAGAGFINVFLSKEYAVNSIINMLRDGVKPPRV 196

Query: 211 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 270
            +K RVLVDFSSPNIAK+MHVGHLRSTIIG++ISRLLE++ HDV+R+NH+GDWGTQFGML
Sbjct: 197 PRK-RVLVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFMQHDVIRINHLGDWGTQFGML 255

Query: 271 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 330
           IAHL+D FP+++ +SPPI DLQ FYKESKKRFD D+ FKKRAY  VV+LQ  DP   KAW
Sbjct: 256 IAHLEDCFPNFVNESPPIGDLQEFYKESKKRFDADDNFKKRAYNRVVSLQSGDPKSTKAW 315

Query: 331 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 390
           ++ICDVSR++FQKIYDRL+VT+TERGESFYQ  M  +V  L  K LLELD+GR+IMW +D
Sbjct: 316 QLICDVSRKEFQKIYDRLDVTITERGESFYQSRMLAIVELLRSKNLLELDEGREIMWTDD 375

Query: 391 -RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            +  IP+T+VKSDGGFTYDTSD+AAIR RIEE+ A WI+YV D
Sbjct: 376 SKSGIPLTVVKSDGGFTYDTSDMAAIRHRIEEDLAIWIIYVVD 418



 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/351 (59%), Positives = 263/351 (74%), Gaps = 12/351 (3%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            D +S+ ++L  VFT A+  A+P   +    VA+ N     KFGD+QCN+AM L K  K+ 
Sbjct: 79   DELSITEHLEKVFTKAIATAYPSFSNVPVVVAAVNGP--SKFGDYQCNNAMGLVKKLKEA 136

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
            G  K+P +IA  I              + +I KIEVA  GF+NVFLS+ YA   I +++ 
Sbjct: 137  GINKSPREIAAEIQKCCPD--------SPIIKKIEVAGAGFINVFLSKEYAVNSIINMLR 188

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            +GV+PP + +K RVLVDFSSPNIAK+MHVGHLRSTIIG++ISRLLE++ HDV+R+NH+GD
Sbjct: 189  DGVKPPRVPRK-RVLVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFMQHDVIRINHLGD 247

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGTQFGMLIAHL+D FP+++ +SPPI DLQ FYKESKKRFD D+ FKKRAY  VV+LQ  
Sbjct: 248  WGTQFGMLIAHLEDCFPNFVNESPPIGDLQEFYKESKKRFDADDNFKKRAYNRVVSLQSG 307

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            DP   KAW++ICDVSR++FQKIYDRL+VT+TERGESFYQ  M  +V  L  K LLELD+G
Sbjct: 308  DPKSTKAWQLICDVSRKEFQKIYDRLDVTITERGESFYQSRMLAIVELLRSKNLLELDEG 367

Query: 1400 RKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            R+IMW +D +  IP+T+VKSDGGFTYDTSD+AAIR RIEE+ A WI+YV D
Sbjct: 368  REIMWTDDSKSGIPLTVVKSDGGFTYDTSDMAAIRHRIEEDLAIWIIYVVD 418


>gi|350537957|ref|NP_001233498.1| arginyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
 gi|397479297|ref|XP_003810961.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Pan paniscus]
 gi|343960971|dbj|BAK62075.1| arginyl-tRNA synthetase [Pan troglodytes]
 gi|410307502|gb|JAA32351.1| arginyl-tRNA synthetase [Pan troglodytes]
          Length = 660

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/608 (58%), Positives = 454/608 (74%), Gaps = 13/608 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L +
Sbjct: 117  SAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ 
Sbjct: 169  DFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKK
Sbjct: 229  GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ VHF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL 
Sbjct: 408  VDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLG 467

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LT  EL+ AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDR
Sbjct: 468  EGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR 527

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  
Sbjct: 528  GNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQK 587

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K
Sbjct: 588  ILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAK 647

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 648  GFDILGIK 655



 Score =  441 bits (1135), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/444 (51%), Positives = 307/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/361 (58%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|327260697|ref|XP_003215170.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Anolis
            carolinensis]
          Length = 663

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/630 (55%), Positives = 467/630 (74%), Gaps = 14/630 (2%)

Query: 440  LQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDK 499
            L+ + EE  K     +   ++    +    P +  +++   L D+F  A++ A+P+L + 
Sbjct: 41   LEGLREENAKLKYRLNVLKKSLQEERNRGQPSKGMININSRLQDIFGAAIKAAYPDLENP 100

Query: 500  TASVASTNEKYVHKFGDFQCNDAMALCK-IFKDKGEKKNPFDIAQSIASVVTSELATNPS 558
              +V  + +    KFGD+QCN AM++ + + K K +K +P +IA  IA  +         
Sbjct: 101  PLAVTPSQQP---KFGDYQCNSAMSITQMLLKTKEQKISPREIADKIARNIPDN------ 151

Query: 559  LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 618
              + I+K+E+A PGF+NV L + +   Q+  ++VNGVQPP + ++ RV+VDFSSPNIAKE
Sbjct: 152  --ECIEKVEIAGPGFINVHLKKDFVSRQLSSLLVNGVQPPAIGERKRVVVDFSSPNIAKE 209

Query: 619  MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 678
            MHVGHLRSTIIGD++ RL E++G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI
Sbjct: 210  MHVGHLRSTIIGDSMCRLFEFVGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPI 269

Query: 679  ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 738
             DLQAFYKESK+RFD +E FKKRAYQCVV LQ  +P++ KAW++ICDVSR++FQKIYD L
Sbjct: 270  GDLQAFYKESKRRFDTEEEFKKRAYQCVVLLQSKNPEFIKAWKLICDVSRQEFQKIYDCL 329

Query: 739  NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 798
            +++L ERGES+YQ  M  +V  LE+KG+++LDDGRKI++     SIP+TIVKSDGGFTYD
Sbjct: 330  DISLVERGESYYQDMMPDIVKELEEKGVVQLDDGRKIVFVPG-CSIPLTIVKSDGGFTYD 388

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            TSDLAAI+QR+ EEKAD I+YV D GQ VH + +   A+  G  +P  TR+    FGVVL
Sbjct: 389  TSDLAAIKQRLLEEKADSIIYVVDSGQSVHLQTIFAAAQMVGWYDPQVTRVVHAPFGVVL 448

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            GED+KKFKTRSGDTV+L +LL+EGL+RS+DKLK+K R   LTP EL  AQ +VA+GCIKY
Sbjct: 449  GEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVLTPEELKAAQTSVAFGCIKY 508

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            +DLSHNR  DY+FSFDKMLDDRGNTA YLLYA+TRI SIAR A I+ + L+ AA++T + 
Sbjct: 509  SDLSHNRINDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIARLASIDEKTLQTAARTTEII 568

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-G 1037
            L+HEKE+ L + +LR  +++  +  DL LH LC+YLY+++T F+EFYD+CYC+EKD + G
Sbjct: 569  LDHEKEWKLGRCILRFPEIIQKILDDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQTG 628

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            KI  V+  R+LL EATA VM K FDIL I+
Sbjct: 629  KIVKVNMWRMLLCEATAAVMAKGFDILGIK 658



 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/442 (50%), Positives = 311/442 (70%), Gaps = 36/442 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  SA+ + L  +  N KLK+RL +L++++ EE  +    
Sbjct: 15  QEKEIKFLTAEIDRLKNFGCLGVSASLEGLREE--NAKLKYRLNVLKKSLQEERNR---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P +  +++   L D+F  A++ A+P+L +   +V  + +    K
Sbjct: 69  --------------GQPSKGMININSRLQDIFGAAIKAAYPDLENPPLAVTPSQQP---K 111

Query: 124 FGDFQCNDAMALCK-IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           FGD+QCN AM++ + + K K +K +P +IA  IA  +           + I+K+E+A PG
Sbjct: 112 FGDYQCNSAMSITQMLLKTKEQKISPREIADKIARNIPDN--------ECIEKVEIAGPG 163

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+NV L + +   Q+  ++VNGVQPP + ++ RV+VDFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 164 FINVHLKKDFVSRQLSSLLVNGVQPPAIGERKRVVVDFSSPNIAKEMHVGHLRSTIIGDS 223

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + RL E++G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESK+RF
Sbjct: 224 MCRLFEFVGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRF 283

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
           D +E FKKRAYQCVV LQ  +P++ KAW++ICDVSR++FQKIYD L+++L ERGES+YQ 
Sbjct: 284 DTEEEFKKRAYQCVVLLQSKNPEFIKAWKLICDVSRQEFQKIYDCLDISLVERGESYYQD 343

Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
            M  +V  LE+KG+++LDDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EE
Sbjct: 344 MMPDIVKELEEKGVVQLDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLLEE 402

Query: 423 KADWIVYVTDH-RSYHQVLQAI 443
           KAD I+YV D  +S H  LQ I
Sbjct: 403 KADSIIYVVDSGQSVH--LQTI 422



 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/391 (53%), Positives = 282/391 (72%), Gaps = 13/391 (3%)

Query: 1060 CFDILNIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVA 1119
            C  +      + EE  K     ++  ++    +    P +  +++   L D+F  A++ A
Sbjct: 34   CLGVSASLEGLREENAKLKYRLNVLKKSLQEERNRGQPSKGMININSRLQDIFGAAIKAA 93

Query: 1120 FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK-IFKDKGEKKNPFDIAQSIASVVTS 1178
            +P+L +   +V  + +    KFGD+QCN AM++ + + K K +K +P +IA  IA  +  
Sbjct: 94   YPDLENPPLAVTPSQQP---KFGDYQCNSAMSITQMLLKTKEQKISPREIADKIARNIPD 150

Query: 1179 ELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFS 1238
                     + I+K+E+A PGF+NV L + +   Q+  ++VNGVQPP + ++ RV+VDFS
Sbjct: 151  N--------ECIEKVEIAGPGFINVHLKKDFVSRQLSSLLVNGVQPPAIGERKRVVVDFS 202

Query: 1239 SPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY 1298
            SPNIAKEMHVGHLRSTIIGD++ RL E++G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDY
Sbjct: 203  SPNIAKEMHVGHLRSTIIGDSMCRLFEFVGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDY 262

Query: 1299 LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDF 1358
            LT SPPI DLQAFYKESK+RFD +E FKKRAYQCVV LQ  +P++ KAW++ICDVSR++F
Sbjct: 263  LTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLLQSKNPEFIKAWKLICDVSRQEF 322

Query: 1359 QKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKS 1418
            QKIYD L+++L ERGES+YQ  M  +V  LE+KG+++LDDGRKI++     SIP+TIVKS
Sbjct: 323  QKIYDCLDISLVERGESYYQDMMPDIVKELEEKGVVQLDDGRKIVFVPG-CSIPLTIVKS 381

Query: 1419 DGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DGGFTYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 382  DGGFTYDTSDLAAIKQRLLEEKADSIIYVVD 412


>gi|426350931|ref|XP_004043016.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Gorilla gorilla
            gorilla]
          Length = 624

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/601 (58%), Positives = 452/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 31   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 87

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 88   MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 139

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 140  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 199

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 200  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 259

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 260  LLQGKNPDITKAWKLICDVSRQELNKIYDVLDVSLIERGESFYQDRMNDIVKEFEDRGFV 319

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 320  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADTIIYVVDNGQSV 378

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL EGL+RS+
Sbjct: 379  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSM 438

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 439  DKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 498

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 499  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 558

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 559  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 618

Query: 1067 R 1067
            +
Sbjct: 619  K 619



 Score =  431 bits (1109), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/397 (54%), Positives = 288/397 (72%), Gaps = 21/397 (5%)

Query: 51  RAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKT 110
           R + +E++ QG   S+ ++        N P ++ +++   L +VF HA++ A+P+L +  
Sbjct: 11  RLLQQEDQIQGPLQSLQAER-------NKPTKNMINIISRLQEVFGHAIKAAYPDLENPP 63

Query: 111 ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 170
             V  + +    KFGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    
Sbjct: 64  LLVTPSQQA---KFGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN---- 112

Query: 171 KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 230
           + I+K+E+A PGF+NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMH
Sbjct: 113 ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMH 172

Query: 231 VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 290
           VGHLRSTIIG++ISRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI D
Sbjct: 173 VGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGD 232

Query: 291 LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 350
           LQ FYKESKKRFD +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V
Sbjct: 233 LQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDVLDV 292

Query: 351 TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTS 410
           +L ERGESFYQ  M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTS
Sbjct: 293 SLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTS 351

Query: 411 DLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQAIAE 445
           DLAAI+QR+ EEKAD I+YV D+ +S H Q + A A+
Sbjct: 352 DLAAIKQRLFEEKADTIIYVVDNGQSVHFQTIFAAAQ 388



 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/386 (55%), Positives = 282/386 (73%), Gaps = 20/386 (5%)

Query: 1070 IAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTAS 1129
            + +E++ QG   S+ ++        N P ++ +++   L +VF HA++ A+P+L +    
Sbjct: 13   LQQEDQIQGPLQSLQAER-------NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLL 65

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            V  + +    KFGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + 
Sbjct: 66   VTPSQQA---KFGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----EC 114

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVG 1249
            I+K+E+A PGF+NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVG
Sbjct: 115  IEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVG 174

Query: 1250 HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 1309
            HLRSTIIG++ISRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ
Sbjct: 175  HLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQ 234

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FYKESKKRFD +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L
Sbjct: 235  VFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDVLDVSL 294

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDL 1429
             ERGESFYQ  M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDL
Sbjct: 295  IERGESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDL 353

Query: 1430 AAIRQRIEEEKADWIVYVTDH-RSYH 1454
            AAI+QR+ EEKAD I+YV D+ +S H
Sbjct: 354  AAIKQRLFEEKADTIIYVVDNGQSVH 379


>gi|62897153|dbj|BAD96517.1| arginyl-tRNA synthetase variant [Homo sapiens]
          Length = 660

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/601 (58%), Positives = 452/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDGMNDIVKEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   L   EL+ AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLAAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++TAF+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/444 (51%), Positives = 307/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDG 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/361 (58%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDGMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|346472213|gb|AEO35951.1| hypothetical protein [Amblyomma maculatum]
          Length = 664

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/596 (60%), Positives = 440/596 (73%), Gaps = 18/596 (3%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASV-ASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            S RD L  +F HAV+ AFPE+ D    V  S+NEK    FGD+QCN AM L +  K  G+
Sbjct: 80   SPRDTLLKLFVHAVRTAFPEIEDPFVPVLPSSNEK----FGDYQCNAAMPLSQALKKAGK 135

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              +P ++A+ I       LA  P+ ++VI +  +A PGF+NV L+  Y    +  I+  G
Sbjct: 136  PMSPIEVAKRI-------LAELPA-SEVIGETSLAGPGFINVTLNPTYVASSVHRILTEG 187

Query: 595  V-QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
            V  PP    K RV+VDFSSPNIAK+MHVGHLRSTIIG++I RLLE++GHDV+RLNHVGDW
Sbjct: 188  VLPPPQAGPKKRVIVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFVGHDVLRLNHVGDW 247

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGMLIAHLQD+FPDYL  SPPI DLQAFYKESK RFD DE FKKRAY CVV LQ  D
Sbjct: 248  GTQFGMLIAHLQDRFPDYLVHSPPIGDLQAFYKESKVRFDSDEEFKKRAYACVVKLQSHD 307

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
             D   AW++ICDVSR++FQ IY+RL+ TL ERGESFYQ+ M ++V  L ++G LE D+GR
Sbjct: 308  QDMISAWKLICDVSRKEFQTIYERLDTTLIERGESFYQEMMGEVVKDLTERGFLEEDEGR 367

Query: 774  KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLE 833
            K+M+  D  S+P+TIVKSDGG+TYDTSD+AA+R R+++EKADWIVYV D GQ  HF  + 
Sbjct: 368  KVMFA-DGMSVPLTIVKSDGGYTYDTSDMAALRHRVQQEKADWIVYVVDAGQAQHFNTVF 426

Query: 834  ECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK 893
             C  KAG ++ +K R+D   FGVVLGED+KKFKTRSGDTVKL++LLDEGL+RSL KL +K
Sbjct: 427  ACGHKAGYVDTSKVRLDHCCFGVVLGEDKKKFKTRSGDTVKLADLLDEGLQRSLQKLHEK 486

Query: 894  NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTR 953
             R   L+P EL  AQ+AVAYGCIKYADLSHNR  +YVFSFD+MLDDRGNTA YLLYA TR
Sbjct: 487  EREKVLSPEELKRAQEAVAYGCIKYADLSHNRIHEYVFSFDRMLDDRGNTAAYLLYALTR 546

Query: 954  IASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEY 1013
            I SIAR  G++   L   +++  V +EH KE  LAK LLR  +VL  +  +L LH LCEY
Sbjct: 547  IRSIARNVGLSLNSL--MSENVTVPVEHPKERKLAKALLRFPEVLATMLEELYLHPLCEY 604

Query: 1014 LYDISTAFSEFYDNCYCIEKD-AEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            L+++S  FSEFYDNCYCIEKD   G++ +++ GRLLL EATA +M K F IL IRT
Sbjct: 605  LFELSQTFSEFYDNCYCIEKDRTTGEVVSINKGRLLLCEATAAIMTKGFFILGIRT 660



 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/416 (54%), Positives = 289/416 (69%), Gaps = 36/416 (8%)

Query: 20  TKGFISE-SATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMN 78
           T G + + SA+ ++ A + +N KLK+RL IL+R++ EEE K               K M 
Sbjct: 33  TDGLVDDISASPELAALRAENAKLKYRLQILKRSVEEEEAK-------------GRKFME 79

Query: 79  VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASV-ASTNEKYVHKFGDFQCNDAMALCK 137
            P       RD L  +F HAV+ AFPE+ D    V  S+NEK    FGD+QCN AM L +
Sbjct: 80  SP-------RDTLLKLFVHAVRTAFPEIEDPFVPVLPSSNEK----FGDYQCNAAMPLSQ 128

Query: 138 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 197
             K  G+  +P ++A+ I       LA  P+ ++VI +  +A PGF+NV L+  Y    +
Sbjct: 129 ALKKAGKPMSPIEVAKRI-------LAELPA-SEVIGETSLAGPGFINVTLNPTYVASSV 180

Query: 198 KDIIVNGV-QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
             I+  GV  PP    K RV+VDFSSPNIAK+MHVGHLRSTIIG++I RLLE++GHDV+R
Sbjct: 181 HRILTEGVLPPPQAGPKKRVIVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFVGHDVLR 240

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           LNHVGDWGTQFGMLIAHLQD+FPDYL  SPPI DLQAFYKESK RFD DE FKKRAY CV
Sbjct: 241 LNHVGDWGTQFGMLIAHLQDRFPDYLVHSPPIGDLQAFYKESKVRFDSDEEFKKRAYACV 300

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ  D D   AW++ICDVSR++FQ IY+RL+ TL ERGESFYQ+ M ++V  L ++G 
Sbjct: 301 VKLQSHDQDMISAWKLICDVSRKEFQTIYERLDTTLIERGESFYQEMMGEVVKDLTERGF 360

Query: 377 LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           LE D+GRK+M+  D  S+P+TIVKSDGG+TYDTSD+AA+R R+++EKADWIVYV D
Sbjct: 361 LEEDEGRKVMFA-DGMSVPLTIVKSDGGYTYDTSDMAALRHRVQQEKADWIVYVVD 415



 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/349 (59%), Positives = 258/349 (73%), Gaps = 15/349 (4%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASV-ASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            S RD L  +F HAV+ AFPE+ D    V  S+NEK    FGD+QCN AM L +  K  G+
Sbjct: 80   SPRDTLLKLFVHAVRTAFPEIEDPFVPVLPSSNEK----FGDYQCNAAMPLSQALKKAGK 135

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              +P ++A+ I       LA  P+ ++VI +  +A PGF+NV L+  Y    +  I+  G
Sbjct: 136  PMSPIEVAKRI-------LAELPA-SEVIGETSLAGPGFINVTLNPTYVASSVHRILTEG 187

Query: 1222 V-QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
            V  PP    K RV+VDFSSPNIAK+MHVGHLRSTIIG++I RLLE++GHDV+RLNHVGDW
Sbjct: 188  VLPPPQAGPKKRVIVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFVGHDVLRLNHVGDW 247

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            GTQFGMLIAHLQD+FPDYL  SPPI DLQAFYKESK RFD DE FKKRAY CVV LQ  D
Sbjct: 248  GTQFGMLIAHLQDRFPDYLVHSPPIGDLQAFYKESKVRFDSDEEFKKRAYACVVKLQSHD 307

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
             D   AW++ICDVSR++FQ IY+RL+ TL ERGESFYQ+ M ++V  L ++G LE D+GR
Sbjct: 308  QDMISAWKLICDVSRKEFQTIYERLDTTLIERGESFYQEMMGEVVKDLTERGFLEEDEGR 367

Query: 1401 KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            K+M+  D  S+P+TIVKSDGG+TYDTSD+AA+R R+++EKADWIVYV D
Sbjct: 368  KVMFA-DGMSVPLTIVKSDGGYTYDTSDMAALRHRVQQEKADWIVYVVD 415


>gi|355715394|gb|AES05313.1| arginyl-tRNA synthetase [Mustela putorius furo]
          Length = 659

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/599 (58%), Positives = 452/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +I 
Sbjct: 69   PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQIL 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  +Q+ +
Sbjct: 126  KTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSQQLTN 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 178  LLVNGVKLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  K W++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E KG +++
Sbjct: 298  QSKNPDITKGWKLICDVSRQEFNKIYDALDISLVERGESFYQDRMNDIVKEFEDKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKAD ++YV D GQ VHF
Sbjct: 358  DDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMVIYVVDSGQSVHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+ AG  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417  QTVFGAAQMAGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTVEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+ + L+ AAQ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANIDEDMLKKAAQETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYDNCYC+EKD + G++  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDNCYCVEKDRQTGQVLKVNMWRMLLCEAVAAVMAKAFDILGIK 655



 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/429 (50%), Positives = 297/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  +  N KLK+RL IL++++  E  +    
Sbjct: 15  QEKEIKSLTAEIDRLKNCGCLEASPNLEQLREE--NLKLKYRLNILRKSLQAERTR---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + +I K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQILKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  +Q+ +++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSQQLTNLLVNGVKLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 CRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  K W++ICDVSR++F KIYD L+++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQSKNPDITKGWKLICDVSRQEFNKIYDALDISLVERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E KG +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEK
Sbjct: 342 MNDIVKEFEDKGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEK 400

Query: 424 ADWIVYVTD 432
           AD ++YV D
Sbjct: 401 ADMVIYVVD 409



 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/353 (57%), Positives = 266/353 (75%), Gaps = 12/353 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +I 
Sbjct: 69   PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQIL 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  +Q+ +
Sbjct: 126  KTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSQQLTN 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 178  LLVNGVKLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  K W++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E KG +++
Sbjct: 298  QSKNPDITKGWKLICDVSRQEFNKIYDALDISLVERGESFYQDRMNDIVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKAD ++YV D
Sbjct: 358  DDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMVIYVVD 409


>gi|328698469|ref|XP_001949420.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
            pisum]
          Length = 592

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/604 (57%), Positives = 448/604 (74%), Gaps = 19/604 (3%)

Query: 467  MNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC 526
            +NV     +++   L  +F+ A++ A+P L D      S   K    F D+QCN +M +C
Sbjct: 4    INVEEHAFINLHSILISLFSKAIKTAYPALEDFGKPAVSAGSK----FADYQCNASMQIC 59

Query: 527  KIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ 586
            K+ K KGE  +P        +VV  +L        +I+K++V+  GF+NV+LSR    + 
Sbjct: 60   KLLKAKGENVSP--------NVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDI 111

Query: 587  IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
            ++ ++ N ++P  L    +++VDFS+PN+AKEMHVGHLRSTIIG+++SR+ E++GHDV+R
Sbjct: 112  LQYVLENKLKPKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVLR 171

Query: 647  LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            +NH+GDWGTQFGMLIA LQDKFP+Y T+SPPI DLQ FYK+SK  FD D  FKKRAY CV
Sbjct: 172  INHIGDWGTQFGMLIALLQDKFPNYKTESPPIKDLQQFYKQSKVLFDSDLEFKKRAYDCV 231

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ   PD+ +AW++ICDVSR++FQKIY+RLN+++ ERGESFYQ  ME +V  LE+KG 
Sbjct: 232  VKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIERGESFYQSRMETVVKDLEEKGF 291

Query: 767  LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            LE DDGRKIMW  +  SIP+T+VKSDGGFTYDTSD+A ++QRIEEEKADWI+YV D GQ 
Sbjct: 292  LENDDGRKIMWSPE-SSIPLTVVKSDGGFTYDTSDIATLKQRIEEEKADWIIYVVDAGQS 350

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
            +HF  L++CA  +G L+P+K RMDFVGFGVVLGED+KKFKTRSGDTV+L+ LLDEG++R+
Sbjct: 351  LHFETLKKCAIHSGFLDPSKVRMDFVGFGVVLGEDKKKFKTRSGDTVRLASLLDEGIKRT 410

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
             DKL +K R   LT  EL  A+ A+AYGCIKYADL HNRN DYVFSFDKMLDD+GNTAVY
Sbjct: 411  RDKLVEKGRDKVLTDEELKLAETALAYGCIKYADLCHNRNHDYVFSFDKMLDDKGNTAVY 470

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            LLYA TRI SI    G  ++DL     + P+SL+H+KE+ LAKTLLR  +V+  +T D C
Sbjct: 471  LLYALTRIRSIINNLGTYTQDL-----NEPISLDHDKEWKLAKTLLRFPEVISKITDDFC 525

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILN 1065
            LHHLCEYLYD++T FSEFYDNCYCIEK+ + G+I  V TGR+LL + TA+ M+   ++L 
Sbjct: 526  LHHLCEYLYDVATTFSEFYDNCYCIEKNPQTGEIVKVFTGRILLCKVTAEYMETGLNLLG 585

Query: 1066 IRTA 1069
            I T 
Sbjct: 586  ISTV 589



 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/356 (53%), Positives = 258/356 (72%), Gaps = 13/356 (3%)

Query: 77  MNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC 136
           +NV     +++   L  +F+ A++ A+P L D      S   K    F D+QCN +M +C
Sbjct: 4   INVEEHAFINLHSILISLFSKAIKTAYPALEDFGKPAVSAGSK----FADYQCNASMQIC 59

Query: 137 KIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ 196
           K+ K KGE  +P        +VV  +L        +I+K++V+  GF+NV+LSR    + 
Sbjct: 60  KLLKAKGENVSP--------NVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDI 111

Query: 197 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
           ++ ++ N ++P  L    +++VDFS+PN+AKEMHVGHLRSTIIG+++SR+ E++GHDV+R
Sbjct: 112 LQYVLENKLKPKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVLR 171

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           +NH+GDWGTQFGMLIA LQDKFP+Y T+SPPI DLQ FYK+SK  FD D  FKKRAY CV
Sbjct: 172 INHIGDWGTQFGMLIALLQDKFPNYKTESPPIKDLQQFYKQSKVLFDSDLEFKKRAYDCV 231

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ   PD+ +AW++ICDVSR++FQKIY+RLN+++ ERGESFYQ  ME +V  LE+KG 
Sbjct: 232 VKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIERGESFYQSRMETVVKDLEEKGF 291

Query: 377 LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           LE DDGRKIMW  +  SIP+T+VKSDGGFTYDTSD+A ++QRIEEEKADWI+YV D
Sbjct: 292 LENDDGRKIMWSPE-SSIPLTVVKSDGGFTYDTSDIATLKQRIEEEKADWIIYVVD 346



 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/356 (53%), Positives = 258/356 (72%), Gaps = 13/356 (3%)

Query: 1094 MNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC 1153
            +NV     +++   L  +F+ A++ A+P L D      S   K    F D+QCN +M +C
Sbjct: 4    INVEEHAFINLHSILISLFSKAIKTAYPALEDFGKPAVSAGSK----FADYQCNASMQIC 59

Query: 1154 KIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ 1213
            K+ K KGE  +P        +VV  +L        +I+K++V+  GF+NV+LSR    + 
Sbjct: 60   KLLKAKGENVSP--------NVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDI 111

Query: 1214 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
            ++ ++ N ++P  L    +++VDFS+PN+AKEMHVGHLRSTIIG+++SR+ E++GHDV+R
Sbjct: 112  LQYVLENKLKPKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVLR 171

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            +NH+GDWGTQFGMLIA LQDKFP+Y T+SPPI DLQ FYK+SK  FD D  FKKRAY CV
Sbjct: 172  INHIGDWGTQFGMLIALLQDKFPNYKTESPPIKDLQQFYKQSKVLFDSDLEFKKRAYDCV 231

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ   PD+ +AW++ICDVSR++FQKIY+RLN+++ ERGESFYQ  ME +V  LE+KG 
Sbjct: 232  VKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIERGESFYQSRMETVVKDLEEKGF 291

Query: 1394 LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            LE DDGRKIMW  +  SIP+T+VKSDGGFTYDTSD+A ++QRIEEEKADWI+YV D
Sbjct: 292  LENDDGRKIMWSPE-SSIPLTVVKSDGGFTYDTSDIATLKQRIEEEKADWIIYVVD 346


>gi|74212414|dbj|BAE30955.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/599 (58%), Positives = 451/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ +HF
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  T +  VGFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417  QTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+   L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 655



 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/430 (52%), Positives = 302/430 (70%), Gaps = 34/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S + + L  +  N KLK+RL IL+R++ EE +K    
Sbjct: 15  QEREIKALTAEIDRLKNCGCLEASPSLEQLREE--NLKLKYRLNILRRSLQEERRK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K +P +IA++I    T  L  N    K IDK+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            DE FKKRAYQCVV LQ  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  
Sbjct: 282 ADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH 433
           A+ I+YV D+
Sbjct: 401 ANKIIYVVDN 410



 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/354 (59%), Positives = 268/354 (75%), Gaps = 12/354 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410


>gi|262118273|ref|NP_080212.2| arginine--tRNA ligase, cytoplasmic [Mus musculus]
 gi|20178137|sp|Q9D0I9.2|SYRC_MOUSE RecName: Full=Arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|18043638|gb|AAH20132.1| Arginyl-tRNA synthetase [Mus musculus]
 gi|26345154|dbj|BAC36226.1| unnamed protein product [Mus musculus]
 gi|74208028|dbj|BAE29127.1| unnamed protein product [Mus musculus]
 gi|148684328|gb|EDL16275.1| arginyl-tRNA synthetase [Mus musculus]
          Length = 660

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/599 (58%), Positives = 451/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ +HF
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  T +  VGFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417  QTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+   L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 655



 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/430 (52%), Positives = 302/430 (70%), Gaps = 34/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S + + L  +  N KLK+RL IL+R++ EE +K    
Sbjct: 15  QEREIKALTAEIDRLKNCGCLEASPSLEQLREE--NLKLKYRLNILRRSLQEERRK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K +P +IA++I    T  L  N    K IDK+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            DE FKKRAYQCVV LQ  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  
Sbjct: 282 ADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH 433
           A+ I+YV D+
Sbjct: 401 ANKIIYVVDN 410



 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/354 (59%), Positives = 268/354 (75%), Gaps = 12/354 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410


>gi|296192722|ref|XP_002744196.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Callithrix jacchus]
          Length = 660

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/601 (58%), Positives = 452/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L  VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQQVFGRAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K N  +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNTREIAENI----TKHLPDN----EYIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
             +++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RL
Sbjct: 176  TNLLVNGVKLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI+DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPISDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW +ICDVSR++F KIY+ L+VTL ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDIIKAWNLICDVSRQEFNKIYEALDVTLVERGESFYQDRMNDVVKEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDSGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKQRDKVLTAEELDAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 299/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G  S  A+ ++   Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEKEIKSLTAEIDRLKNCG--SLGASPNLEQLQEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L  VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQQVFGRAIKAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K N  +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNTREIAENI----TKHLPDN----EYIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+ +++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTNLLVNGVKLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESV 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI+DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPISDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW +ICDVSR++F KIY+ L+VTL ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDIIKAWNLICDVSRQEFNKIYEALDVTLVERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDVVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/355 (58%), Positives = 267/355 (75%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L  VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQQVFGRAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K N  +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNTREIAENI----TKHLPDN----EYIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
             +++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RL
Sbjct: 176  TNLLVNGVKLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI+DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPISDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW +ICDVSR++F KIY+ L+VTL ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDIIKAWNLICDVSRQEFNKIYEALDVTLVERGESFYQDRMNDVVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVD 409


>gi|189054553|dbj|BAG37326.1| unnamed protein product [Homo sapiens]
          Length = 660

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/601 (58%), Positives = 451/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESK RFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKNRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++ DGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVGDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++TAF+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/444 (51%), Positives = 305/444 (68%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESK RFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKNRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++ DGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVGDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/361 (57%), Positives = 269/361 (74%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESK RFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKNRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++ DGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVGDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|332238981|ref|XP_003268683.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Nomascus leucogenys]
          Length = 660

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/608 (58%), Positives = 454/608 (74%), Gaps = 13/608 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L +
Sbjct: 117  SAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  EQ+  ++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ 
Sbjct: 169  DFVSEQLTSLLVNGVRLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKK
Sbjct: 229  GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQLFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDTLDISLIERGESFYQDRMYDIVKE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G ++LDDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQLDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ VHF+ +   A+  G  +P  T +   GFGVVLGED+KKFKTRSG+TV+L +LL 
Sbjct: 408  VDNGQSVHFQTIFAAAQMIGWYDPKVTPVFLAGFGVVLGEDKKKFKTRSGETVRLVDLLG 467

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DYVFSFDKMLDD+
Sbjct: 468  EGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYVFSFDKMLDDK 527

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  
Sbjct: 528  GNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQK 587

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K
Sbjct: 588  ILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAK 647

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 648  GFDILGIK 655



 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/444 (51%), Positives = 308/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVRLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQLFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDTLDISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G ++LDDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MYDIVKEFEDRGFVQLDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/361 (58%), Positives = 272/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVRLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQLFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQEFNKIYDTLDISLIERGESFYQDRMYDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            +LDDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QLDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|261858632|dbj|BAI45838.1| arginyl-tRNA synthetase [synthetic construct]
          Length = 660

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/608 (58%), Positives = 454/608 (74%), Gaps = 13/608 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L +
Sbjct: 117  SAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ 
Sbjct: 169  DFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKK
Sbjct: 229  GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ VHF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL 
Sbjct: 408  VDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLG 467

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LT  EL+ AQ +VAYG IKYADLSHNR  DY+FSFDKMLDDR
Sbjct: 468  EGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGYIKYADLSHNRLNDYIFSFDKMLDDR 527

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  
Sbjct: 528  GNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQK 587

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++TAF+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K
Sbjct: 588  ILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAK 647

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 648  GFDILGIK 655



 Score =  441 bits (1135), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/444 (51%), Positives = 307/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/361 (58%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|291387790|ref|XP_002710413.1| PREDICTED: arginyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 660

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/599 (58%), Positives = 451/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM +C++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGICQML 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K NP +IA++I    T  +  N    + I+K E+A PGF+N+ L + +  EQ+ +
Sbjct: 126  KAKEQKVNPREIAENI----TKHIPNN----EYIEKTEIAGPGFINIHLRKDFVSEQLSN 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGV  P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+R+NH
Sbjct: 178  LLVNGVHLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRINH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q   PD  KAW++ICDVSR++F KIYD L ++L ERGESFYQ  M  +V   E+KG +++
Sbjct: 298  QSKSPDIIKAWKLICDVSRQEFNKIYDALEISLIERGESFYQDRMNDVVNEFEEKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ +HF
Sbjct: 358  DDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDSGQALHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417  QAIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLVDLLEEGLKRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTAEELQAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMSKGFDILGIK 655



 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/429 (50%), Positives = 298/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   +++++L  +  +  S   + L  +  N KLK+RL IL++++  E  +    
Sbjct: 15  QEKEIKSLNAEIDQLKNRVCLETSPNLEHLREE--NLKLKYRLNILRKSLQAERSR---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIKAAYPDLENPPLLVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM +C++ K K +K NP +IA++I    T  +  N    + I+K E+A PGF
Sbjct: 110 FGDYQCNSAMGICQMLKAKEQKVNPREIAENI----TKHIPNN----EYIEKTEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L + +  EQ+ +++VNGV  P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INIHLRKDFVSEQLSNLLVNGVHLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+R+NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRINHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ   PD  KAW++ICDVSR++F KIYD L ++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQSKSPDIIKAWKLICDVSRQEFNKIYDALEISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E+KG +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDVVNEFEEKGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/353 (57%), Positives = 266/353 (75%), Gaps = 12/353 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM +C++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGICQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K NP +IA++I    T  +  N    + I+K E+A PGF+N+ L + +  EQ+ +
Sbjct: 126  KAKEQKVNPREIAENI----TKHIPNN----EYIEKTEIAGPGFINIHLRKDFVSEQLSN 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGV  P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+R+NH
Sbjct: 178  LLVNGVHLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRINH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q   PD  KAW++ICDVSR++F KIYD L ++L ERGESFYQ  M  +V   E+KG +++
Sbjct: 298  QSKSPDIIKAWKLICDVSRQEFNKIYDALEISLIERGESFYQDRMNDVVNEFEEKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 358  DDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVD 409


>gi|71895355|ref|NP_001025778.1| arginine--tRNA ligase, cytoplasmic [Gallus gallus]
 gi|82082785|sp|Q5ZM11.1|SYRC_CHICK RecName: Full=Arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|53127806|emb|CAG31232.1| hypothetical protein RCJMB04_3h11 [Gallus gallus]
          Length = 661

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/599 (58%), Positives = 451/599 (75%), Gaps = 14/599 (2%)

Query: 471  VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF- 529
            V+  +++   L ++F  A+Q A+PEL +    V  + +    KFGD+QCN AM + +I  
Sbjct: 70   VKSMININSRLQEIFGAAIQAAYPELENPPLVVTPSQQP---KFGDYQCNSAMGITQILL 126

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K +P +IA+ I    T  +  N    + I+K+E+A PGF+NV L + +  +Q+  
Sbjct: 127  KTKEQKVSPREIAEKI----TKHIPAN----ECIEKVEIAGPGFINVHLRKDFVSKQLSS 178

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQPP + K+ +V++DFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 179  LLVNGVQPPAIGKRKKVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 238

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            +GDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESK+RFD +E FKKRAYQCVV L
Sbjct: 239  LGDWGTQFGMLIAHLQDRFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLL 298

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  DPD+ KAWE+ICDVSR++FQKIY+ L+VTLTERGESFYQ  M+ +V   E KG +++
Sbjct: 299  QSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQDMMKDIVKEFEDKGFVQV 358

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TI+KSDGG+TYDTSDLAA+R R+ EEK D ++YV D GQ VH 
Sbjct: 359  DDGRKIVFVPGF-SVPLTIMKSDGGYTYDTSDLAALRHRLLEEKGDILIYVVDSGQSVHL 417

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +    +  G  +P  TR+    FGVVLGED+KKFKTRSGDTV+L +LL+EGL+R++DK
Sbjct: 418  QTVFAAGQMIGWYDPKVTRITHAAFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRAMDK 477

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LKDK R   LTP EL  AQ +VA+GCIKYADLSHNR  DYVFSFDKMLDDRGNTA YLLY
Sbjct: 478  LKDKERDKVLTPEELKAAQMSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLY 537

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI +IAR A I+   LR AA+   + L+HEKE+ L K +LR  ++L  +  DL LH 
Sbjct: 538  AFTRIRAIARLANIDEGMLRKAAREEVIVLDHEKEWKLGKCILRFPEILQKILDDLLLHT 597

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+YLY+++T F+EFYDNCYC+EKD + G+I  V+T RLLL EATA +M K FDIL I+
Sbjct: 598  LCDYLYELATTFTEFYDNCYCVEKDRQSGQIMKVNTWRLLLCEATATIMAKGFDILGIK 656



 Score =  434 bits (1117), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/430 (50%), Positives = 300/430 (69%), Gaps = 35/430 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   +++  L   G +  S + + L  +  N KLK+RL  LQ+++ EE+ K    
Sbjct: 15  QENEIKSLTAEIEHLKNFGCLGISPSLEGLRDE--NAKLKYRLNFLQKSLQEEQSKT--- 69

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                            V+  +++   L ++F  A+Q A+PEL +    V  + +    K
Sbjct: 70  -----------------VKSMININSRLQEIFGAAIQAAYPELENPPLVVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           FGD+QCN AM + +I  K K +K +P +IA+ I    T  +  N    + I+K+E+A PG
Sbjct: 110 FGDYQCNSAMGITQILLKTKEQKVSPREIAEKI----TKHIPAN----ECIEKVEIAGPG 161

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+NV L + +  +Q+  ++VNGVQPP + K+ +V++DFSSPNIAKEMHVGHLRSTIIG++
Sbjct: 162 FINVHLRKDFVSKQLSSLLVNGVQPPAIGKRKKVILDFSSPNIAKEMHVGHLRSTIIGES 221

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + RL E+ G+DV+RLNH+GDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESK+RF
Sbjct: 222 MCRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDRFPDYLTVSPPIGDLQAFYKESKRRF 281

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
           D +E FKKRAYQCVV LQ  DPD+ KAWE+ICDVSR++FQKIY+ L+VTLTERGESFYQ 
Sbjct: 282 DTEEEFKKRAYQCVVLLQSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQD 341

Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
            M+ +V   E KG +++DDGRKI++     S+P+TI+KSDGG+TYDTSDLAA+R R+ EE
Sbjct: 342 MMKDIVKEFEDKGFVQVDDGRKIVFVPGF-SVPLTIMKSDGGYTYDTSDLAALRHRLLEE 400

Query: 423 KADWIVYVTD 432
           K D ++YV D
Sbjct: 401 KGDILIYVVD 410



 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/353 (57%), Positives = 268/353 (75%), Gaps = 13/353 (3%)

Query: 1098 VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF- 1156
            V+  +++   L ++F  A+Q A+PEL +    V  + +    KFGD+QCN AM + +I  
Sbjct: 70   VKSMININSRLQEIFGAAIQAAYPELENPPLVVTPSQQP---KFGDYQCNSAMGITQILL 126

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA+ I    T  +  N    + I+K+E+A PGF+NV L + +  +Q+  
Sbjct: 127  KTKEQKVSPREIAEKI----TKHIPAN----ECIEKVEIAGPGFINVHLRKDFVSKQLSS 178

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQPP + K+ +V++DFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 179  LLVNGVQPPAIGKRKKVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 238

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            +GDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESK+RFD +E FKKRAYQCVV L
Sbjct: 239  LGDWGTQFGMLIAHLQDRFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLL 298

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  DPD+ KAWE+ICDVSR++FQKIY+ L+VTLTERGESFYQ  M+ +V   E KG +++
Sbjct: 299  QSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQDMMKDIVKEFEDKGFVQV 358

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DDGRKI++     S+P+TI+KSDGG+TYDTSDLAA+R R+ EEK D ++YV D
Sbjct: 359  DDGRKIVFVPGF-SVPLTIMKSDGGYTYDTSDLAALRHRLLEEKGDILIYVVD 410


>gi|326928305|ref|XP_003210321.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Meleagris
            gallopavo]
          Length = 648

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/599 (58%), Positives = 450/599 (75%), Gaps = 14/599 (2%)

Query: 471  VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF- 529
            V+  +++   L ++F  A+Q A+PEL +    V  + +    KFGD+QCN AM + +I  
Sbjct: 57   VKSMININSRLQEIFGAAIQAAYPELENPPLVVTPSQQP---KFGDYQCNSAMGITQILL 113

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K + +K +P +IA+ I    T  +  N    + I+K+E+A PGF+NV L + +  +Q+  
Sbjct: 114  KTREQKVSPREIAEKI----TKHIPAN----ECIEKVEIAGPGFINVHLRKDFVSKQLSS 165

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQPP + K+ RV++DFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 166  LLVNGVQPPAIGKRKRVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 225

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            +GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESK+RFD +E FKKRAYQCVV L
Sbjct: 226  LGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLL 285

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  DPD+ KAWE+ICDVSR++FQKIY+ L+VTLTERGESFYQ  M+ +V   E KG +++
Sbjct: 286  QSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQDMMKDIVKEFEDKGFVQV 345

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRK+++     S+P+TIVKSDGG+TYDTSDLAA+R R+ EEK D ++YV D GQ VH 
Sbjct: 346  DDGRKVVFVPG-FSVPLTIVKSDGGYTYDTSDLAALRHRLLEEKGDILIYVVDSGQSVHL 404

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +    +  G  +P  TR+    FGVVLGED+KKFKTRSGD V+L +LL+EGL+R++DK
Sbjct: 405  QTVFAAGQMIGWYDPTVTRITHAAFGVVLGEDKKKFKTRSGDAVRLMDLLEEGLKRAMDK 464

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LKDK R   LTP EL  AQ +VA+GCIKYADLSHNR  DYVFSFDKMLDDRGNTA YLLY
Sbjct: 465  LKDKERDKVLTPEELKAAQVSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLY 524

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI +IAR A I+ E LR AA+   + L+HEKE+ L K +LR  ++L  +  DL LH 
Sbjct: 525  AFTRIRAIARLANIDEEMLRKAAREEALVLDHEKEWKLGKCILRFPEILQKILDDLLLHT 584

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+YLY+++T F+EFYDNCYC+EKD + G+I  V+  RLLL EATA +M K FDIL I+
Sbjct: 585  LCDYLYELATTFTEFYDNCYCVEKDRQSGQIVKVNMWRLLLCEATATIMAKGFDILGIK 643



 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/431 (51%), Positives = 299/431 (69%), Gaps = 35/431 (8%)

Query: 3   IKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGI 62
           + E ++K   +++  L   G +  S + + L  +  N KLK+RL  LQ+++ EE  K   
Sbjct: 1   MPENEIKSLTAEIEHLKNFGCLGVSPSLEGLRDE--NAKLKYRLNFLQKSLQEERSKT-- 56

Query: 63  SSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH 122
                             V+  +++   L ++F  A+Q A+PEL +    V  + +    
Sbjct: 57  ------------------VKSMININSRLQEIFGAAIQAAYPELENPPLVVTPSQQP--- 95

Query: 123 KFGDFQCNDAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
           KFGD+QCN AM + +I  K + +K +P +IA+ I    T  +  N    + I+K+E+A P
Sbjct: 96  KFGDYQCNSAMGITQILLKTREQKVSPREIAEKI----TKHIPAN----ECIEKVEIAGP 147

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           GF+NV L + +  +Q+  ++VNGVQPP + K+ RV++DFSSPNIAKEMHVGHLRSTIIG+
Sbjct: 148 GFINVHLRKDFVSKQLSSLLVNGVQPPAIGKRKRVILDFSSPNIAKEMHVGHLRSTIIGE 207

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           ++ RL E+ G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESK+R
Sbjct: 208 SMCRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRR 267

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 361
           FD +E FKKRAYQCVV LQ  DPD+ KAWE+ICDVSR++FQKIY+ L+VTLTERGESFYQ
Sbjct: 268 FDTEEEFKKRAYQCVVLLQSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQ 327

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 421
             M+ +V   E KG +++DDGRK+++     S+P+TIVKSDGG+TYDTSDLAA+R R+ E
Sbjct: 328 DMMKDIVKEFEDKGFVQVDDGRKVVFVPG-FSVPLTIVKSDGGYTYDTSDLAALRHRLLE 386

Query: 422 EKADWIVYVTD 432
           EK D ++YV D
Sbjct: 387 EKGDILIYVVD 397



 Score =  425 bits (1092), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/353 (57%), Positives = 268/353 (75%), Gaps = 13/353 (3%)

Query: 1098 VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF- 1156
            V+  +++   L ++F  A+Q A+PEL +    V  + +    KFGD+QCN AM + +I  
Sbjct: 57   VKSMININSRLQEIFGAAIQAAYPELENPPLVVTPSQQP---KFGDYQCNSAMGITQILL 113

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K + +K +P +IA+ I    T  +  N    + I+K+E+A PGF+NV L + +  +Q+  
Sbjct: 114  KTREQKVSPREIAEKI----TKHIPAN----ECIEKVEIAGPGFINVHLRKDFVSKQLSS 165

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQPP + K+ RV++DFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 166  LLVNGVQPPAIGKRKRVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 225

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            +GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESK+RFD +E FKKRAYQCVV L
Sbjct: 226  LGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLL 285

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  DPD+ KAWE+ICDVSR++FQKIY+ L+VTLTERGESFYQ  M+ +V   E KG +++
Sbjct: 286  QSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQDMMKDIVKEFEDKGFVQV 345

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DDGRK+++     S+P+TIVKSDGG+TYDTSDLAA+R R+ EEK D ++YV D
Sbjct: 346  DDGRKVVFVPG-FSVPLTIVKSDGGYTYDTSDLAALRHRLLEEKGDILIYVVD 397


>gi|410949334|ref|XP_003981378.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Felis catus]
          Length = 660

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/599 (58%), Positives = 453/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K NP +IA++I    T  L  N    + ++K+E+A PGF+NV L + Y  +Q+ +
Sbjct: 126  KTKEQKVNPREIAENI----TKHLPDN----ECVEKVEIAGPGFINVHLRKDYVSQQLTN 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G++V+RLNH
Sbjct: 178  LLVNGVQLPPLGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYEVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTISPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E +G +++
Sbjct: 298  QSKNPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDIVKEFEDRGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ VHF
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDSGQSVHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417  QTIFGAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+ E L+ AAQ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANIDEEMLQKAAQETKIILDHEKEWKLGRCILRFPEILQKILDDLLLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + G++  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGQVLKVNMWRMLLCEAVAAVMAKAFDILGIK 655



 Score =  435 bits (1118), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/429 (51%), Positives = 299/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S   + L  +  N KLK+RL IL+R++  E  +    
Sbjct: 15  QEKEIKSLTAEIDRLKNCGGLEVSPNLEQLREE--NLKLKYRLNILRRSLQAERTR---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + ++K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECVEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + Y  +Q+ +++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDYVSQQLTNLLVNGVQLPPLGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYEVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTISPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  425 bits (1092), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/353 (57%), Positives = 268/353 (75%), Gaps = 12/353 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K NP +IA++I    T  L  N    + ++K+E+A PGF+NV L + Y  +Q+ +
Sbjct: 126  KTKEQKVNPREIAENI----TKHLPDN----ECVEKVEIAGPGFINVHLRKDYVSQQLTN 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G++V+RLNH
Sbjct: 178  LLVNGVQLPPLGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYEVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTISPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E +G +++
Sbjct: 298  QSKNPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDIVKEFEDRGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVD 409


>gi|74207302|dbj|BAE30837.1| unnamed protein product [Mus musculus]
          Length = 608

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/599 (58%), Positives = 451/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 17   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 73

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 74   KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 125

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 126  LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 185

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 186  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 245

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 246  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 305

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ +HF
Sbjct: 306  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHF 364

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  T +  VGFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 365  QTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDK 424

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 425  LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 484

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+   L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 485  AFTRIRSIARLANIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 544

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 545  LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 603



 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/390 (55%), Positives = 281/390 (72%), Gaps = 32/390 (8%)

Query: 44  HRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAF 103
           +RL IL+R++ EE +K                    P ++ +++   L +VF  A++ A+
Sbjct: 1   YRLNILRRSLQEERRK--------------------PTKNMININSRLQEVFGCAIRAAY 40

Query: 104 PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSEL 163
           P+L +    V  + +    KFGD+QCN AM + ++ K K +K +P +IA++I    T  L
Sbjct: 41  PDLENPPLIVTPSQQP---KFGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHL 93

Query: 164 ATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSP 223
             N    K IDK+E+A PGF+NV L + +  EQ+  ++VNGVQ P L  K +V+VDFSSP
Sbjct: 94  PNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPVLGDKEKVIVDFSSP 149

Query: 224 NIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLT 283
           NIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT
Sbjct: 150 NIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLT 209

Query: 284 KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQK 343
            SPPI DLQAFYKESKKRFD DE FKKRAYQCVV LQ  +PD  KAW +ICDVSR +F+K
Sbjct: 210 VSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKK 269

Query: 344 IYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDG 403
           IYD L++TL ERGESFYQ  M+ +V   E KG +++DDGRKI++     S+P+TIVKSDG
Sbjct: 270 IYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDG 328

Query: 404 GFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           G+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 329 GYTYDTSDLAAIKQRLFEEKANKIIYVVDN 358



 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/354 (59%), Positives = 268/354 (75%), Gaps = 12/354 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 17   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 73

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 74   KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 125

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 126  LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 185

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 186  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 245

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 246  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 305

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 306  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 358


>gi|73953488|ref|XP_853102.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic isoform 1 [Canis
            lupus familiaris]
          Length = 660

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/599 (57%), Positives = 452/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K NP +IA++I    T  L  N    + ++++E+A PGF+NV L + +  +Q+ +
Sbjct: 126  KTKEQKVNPREIAENI----TKHLPDN----ECVERVEIAGPGFINVHLRKDFVSQQLTN 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 178  LLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E KG +++
Sbjct: 298  QSKNPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDVVKEFEDKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAA++QR+ EEKAD I+YV D GQ VHF
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYVVDNGQSVHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417  QTIFGAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A IN E L+ AAQ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANINEEMLQKAAQETKIVLDHEKEWKLGRCILRFPEILQKILDDLLLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + G++  V+  R+LL EA A +M K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGQVLKVNMWRMLLCEAVAAIMAKAFDILGIK 655



 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/435 (50%), Positives = 304/435 (69%), Gaps = 35/435 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G + +S   D+   + +N KLK+RL IL++++  E  +    
Sbjct: 15  QEKEIKSLTAEIDRLKNCGCLEDSP--DLEQLREENLKLKYRLKILRKSLQAERTR---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + ++++E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECVERVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  +Q+ +++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSQQLTNLLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 CRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAA++QR+ EEK
Sbjct: 342 MNDVVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAALKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH 437
           AD I+YV D+ +S H
Sbjct: 401 ADMIIYVVDNGQSVH 415



 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/359 (56%), Positives = 271/359 (75%), Gaps = 13/359 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K NP +IA++I    T  L  N    + ++++E+A PGF+NV L + +  +Q+ +
Sbjct: 126  KTKEQKVNPREIAENI----TKHLPDN----ECVERVEIAGPGFINVHLRKDFVSQQLTN 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 178  LLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E KG +++
Sbjct: 298  QSKNPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDVVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH 1454
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAA++QR+ EEKAD I+YV D+ +S H
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYVVDNGQSVH 415


>gi|198282039|ref|NP_001127107.1| arginine--tRNA ligase, cytoplasmic [Pongo abelii]
 gi|75041818|sp|Q5RA20.1|SYRC_PONAB RecName: Full=Arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|55729309|emb|CAH91390.1| hypothetical protein [Pongo abelii]
          Length = 660

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/601 (58%), Positives = 452/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ ++V   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINVISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+N+ L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINIHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDMMNDIVKEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TI+KSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ ++AYGC+KYADLSHNR  DY+FSFDKMLDD+GNTA YL
Sbjct: 475  DKLKEKERDKVLTAEELNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKMLDDKGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/444 (51%), Positives = 308/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  SA  + L  Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASANLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ ++V   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINVISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INIHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDM 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TI+KSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTILKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/361 (57%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ ++V   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINVISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+N+ L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINIHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDMMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TI+KSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|90077298|dbj|BAE88329.1| unnamed protein product [Macaca fascicularis]
          Length = 588

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/594 (58%), Positives = 450/594 (75%), Gaps = 13/594 (2%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 2    ININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQMLKTKEQ 58

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 59   KVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 110

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            VQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RLNHVGDWG
Sbjct: 111  VQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWG 170

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 171  TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNP 230

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            D  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 231  DITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFVQVDDGRK 290

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ VHF+ +  
Sbjct: 291  IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFA 349

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A+  G  +P  TR+   GFGVVLGED+KKFKTR+G+TV+L +L+ EGL+RS+DKLK+K 
Sbjct: 350  AAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKE 409

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLYA+TRI
Sbjct: 410  RDKVLTAEELNVAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRI 469

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
             SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH LC+Y+
Sbjct: 470  RSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYI 529

Query: 1015 YDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I+
Sbjct: 530  YELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGIK 583



 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/348 (59%), Positives = 265/348 (76%), Gaps = 12/348 (3%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 2   ININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQMLKTKEQ 58

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
           K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 59  KVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 110

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           VQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RLNHVGDWG
Sbjct: 111 VQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWG 170

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 171 TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNP 230

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
           D  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 231 DITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFVQVDDGRK 290

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 291 IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 337



 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/348 (59%), Positives = 265/348 (76%), Gaps = 12/348 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 2    ININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQMLKTKEQ 58

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 59   KVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 110

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            VQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RLNHVGDWG
Sbjct: 111  VQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWG 170

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 171  TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNP 230

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 231  DITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFVQVDDGRK 290

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 291  IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 337


>gi|348574911|ref|XP_003473233.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Cavia
            porcellus]
          Length = 660

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/601 (57%), Positives = 455/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L ++F  A++ A+P L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSCLQEIFGCAIKAAYPGLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K +P +IA++I   + +         + I+K+E+A PGF+NV L + +  +Q+
Sbjct: 124  MLKAKDQKVSPREIAENITKHLPN--------TEYIEKVEIAGPGFINVHLRKDFVSQQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              +++NGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+R+
Sbjct: 176  TSLLLNGVQLPAIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRI 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  DPD+ +AW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V  LE++G +
Sbjct: 296  RLQSKDPDFLQAWKLICDVSRQEFNKIYEALDISLIERGESFYQDRMPDVVKELEERGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSD+AAI+QR+ EEKAD I+YV D GQ +
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDMAAIKQRLFEEKADMIIYVVDSGQAM 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RSL
Sbjct: 415  HFQTVFAAAQMMGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSL 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LTP EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTPEELKAAQTSVAYGCIKYADLSHNRMNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E LR AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLRKAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYDNCYC+EKD + G+I  V+  R+LL EA A VM K F+IL I
Sbjct: 595  HTLCDYIYELATTFTEFYDNCYCVEKDRQTGEILKVNMWRMLLCEAVAAVMAKGFEILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/429 (48%), Positives = 301/429 (70%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L  K +    A+  +   + +N KLK+RL IL++++  E+ K    
Sbjct: 15  QEKEIKSLTAEIDRL--KNYTCLEASPSLEQLKEENLKLKYRLNILRKSLQAEKNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L ++F  A++ A+P L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSCLQEIFGCAIKAAYPGLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K +P +IA++I   + +         + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKDQKVSPREIAENITKHLPN--------TEYIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  +Q+  +++NGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSQQLTSLLLNGVQLPAIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESV 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+R+NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRINHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  DPD+ +AW++ICDVSR++F KIY+ L+++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVRLQSKDPDFLQAWKLICDVSRQEFNKIYEALDISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V  LE++G +++DDGRKI++     SIP+TIVKSDGG+TYDTSD+AAI+QR+ EEK
Sbjct: 342 MPDVVKELEERGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDMAAIKQRLFEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/355 (55%), Positives = 269/355 (75%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L ++F  A++ A+P L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSCLQEIFGCAIKAAYPGLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K +P +IA++I   + +         + I+K+E+A PGF+NV L + +  +Q+
Sbjct: 124  MLKAKDQKVSPREIAENITKHLPN--------TEYIEKVEIAGPGFINVHLRKDFVSQQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              +++NGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+R+
Sbjct: 176  TSLLLNGVQLPAIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRI 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  DPD+ +AW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V  LE++G +
Sbjct: 296  RLQSKDPDFLQAWKLICDVSRQEFNKIYEALDISLIERGESFYQDRMPDVVKELEERGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSD+AAI+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDMAAIKQRLFEEKADMIIYVVD 409


>gi|74141610|dbj|BAE38569.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/599 (58%), Positives = 451/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAH+QDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHMQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ +HF
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  T +  VGFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417  QTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+   L+ AA+ T + L+HEKE+ L + +LR  ++L  +  +L LH 
Sbjct: 537  AFTRIRSIARLANIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDNLFLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 655



 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/430 (52%), Positives = 302/430 (70%), Gaps = 34/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S + + L  +  N KLK+RL IL+R++ EE +K    
Sbjct: 15  QEREIKALTAEIDRLKNCGCLEASPSLEQLREE--NLKLKYRLNILRRSLQEERRK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K +P +IA++I    T  L  N    K IDK+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAH+QDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHMQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            DE FKKRAYQCVV LQ  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  
Sbjct: 282 ADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH 433
           A+ I+YV D+
Sbjct: 401 ANKIIYVVDN 410



 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/354 (58%), Positives = 268/354 (75%), Gaps = 12/354 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAH+QDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHMQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410


>gi|351708139|gb|EHB11058.1| Arginyl-tRNA synthetase, cytoplasmic [Heterocephalus glaber]
          Length = 660

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/601 (57%), Positives = 452/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L ++F  A++ A+P+L     +V  + +    +FGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEIFGCAIKAAYPDLESPPLTVTPSQQP---RFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N      I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKAKDQKVNPREIAENI----TKHLPNN----DCIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
             +++VNG+Q P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+R+
Sbjct: 176  TNLLVNGIQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRI 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SP I DLQ FYKESKKRFD +E FK+RAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPTIGDLQGFYKESKKRFDTEEEFKRRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  DPD  +AW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V   E KG +
Sbjct: 296  RLQGKDPDITQAWKLICDVSRQEFNKIYEALDISLIERGESFYQDGMPLVVKEFEDKGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSD+AAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDMAAIKQRLFEEKADMIIYVVDNGQAV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+
Sbjct: 415  HFQTVFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LTP EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTPEELKAAQTSVAYGCIKYADLSHNRMNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLASIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYDNCYC+EKD + GK+  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDNCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/430 (49%), Positives = 301/430 (70%), Gaps = 34/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   +++++L  K +    A+ ++   Q +N KLK+RL IL++++  E+ K    
Sbjct: 15  QEKEIKSLTAEIDQL--KNYSCLEASPNLQQLQEENLKLKYRLNILRKSLQAEKNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L ++F  A++ A+P+L     +V  + +    +
Sbjct: 69  ----------------PTKNMININSRLQEIFGCAIKAAYPDLESPPLTVTPSQQP---R 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N      I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKDQKVNPREIAENI----TKHLPNN----DCIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+ +++VNG+Q P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTNLLVNGIQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+R+NHVGDWGTQFGMLIAHLQDKFPDYLT SP I DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRINHVGDWGTQFGMLIAHLQDKFPDYLTVSPTIGDLQGFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FK+RAYQCVV LQ  DPD  +AW++ICDVSR++F KIY+ L+++L ERGESFYQ  
Sbjct: 282 TEEEFKRRAYQCVVRLQGKDPDITQAWKLICDVSRQEFNKIYEALDISLIERGESFYQDG 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E KG +++DDGRKI++     SIP+TIVKSDGG+TYDTSD+AAI+QR+ EEK
Sbjct: 342 MPLVVKEFEDKGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDMAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH 433
           AD I+YV D+
Sbjct: 401 ADMIIYVVDN 410



 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/356 (55%), Positives = 267/356 (75%), Gaps = 12/356 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L ++F  A++ A+P+L     +V  + +    +FGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEIFGCAIKAAYPDLESPPLTVTPSQQP---RFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N      I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKAKDQKVNPREIAENI----TKHLPNN----DCIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
             +++VNG+Q P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+R+
Sbjct: 176  TNLLVNGIQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRI 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SP I DLQ FYKESKKRFD +E FK+RAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPTIGDLQGFYKESKKRFDTEEEFKRRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  DPD  +AW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V   E KG +
Sbjct: 296  RLQGKDPDITQAWKLICDVSRQEFNKIYEALDISLIERGESFYQDGMPLVVKEFEDKGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSD+AAI+QR+ EEKAD I+YV D+
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDMAAIKQRLFEEKADMIIYVVDN 410


>gi|158631214|ref|NP_001099247.2| arginine--tRNA ligase, cytoplasmic [Rattus norvegicus]
 gi|300669674|sp|P40329.2|SYRC_RAT RecName: Full=Arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|171846737|gb|AAI61929.1| Arginyl-tRNA synthetase [Rattus norvegicus]
          Length = 660

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/599 (58%), Positives = 452/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L ++F  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K +P +IA++I    T  L  N    + ID++E+A PGF+NV L + +  EQ+ +
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFVSEQLTN 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G++V+RLNH
Sbjct: 178  LLVNGVQLPVLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY+CVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYECVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ  HF
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQATHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  TR+  VGFGVVLGED+KKFKTRSG+TV+L +LL+EGLRRS+DK
Sbjct: 417  QTVFAAAQMIGWYDPKVTRVAHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLRRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DYVFSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANIDEEMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 655



 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/430 (50%), Positives = 301/430 (70%), Gaps = 34/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L    ++  S + + L  +  N KLK+RL IL+R++  E K+    
Sbjct: 15  QEKEIKSLTAEIDRLKNCSYLEASPSLEQLREE--NLKLKYRLNILRRSLQAERKR---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L ++F  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K +P +IA++I    T  L  N    + ID++E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----EYIDRVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+ +++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTNLLVNGVQLPVLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAY+CVV LQ  +PD  KAW +ICDVSR +F KIYD L++TL ERGESFYQ  
Sbjct: 282 TEEEFKKRAYECVVLLQSKNPDIMKAWNLICDVSREEFNKIYDALDITLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH 433
           A+ I+YV D+
Sbjct: 401 ANKIIYVVDN 410



 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/354 (57%), Positives = 268/354 (75%), Gaps = 12/354 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L ++F  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA++I    T  L  N    + ID++E+A PGF+NV L + +  EQ+ +
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFVSEQLTN 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G++V+RLNH
Sbjct: 178  LLVNGVQLPVLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY+CVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYECVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410


>gi|395817094|ref|XP_003782010.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Otolemur garnettii]
          Length = 660

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/597 (58%), Positives = 450/597 (75%), Gaps = 13/597 (2%)

Query: 472  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ K 
Sbjct: 71   KNMININSRLQEVFGRAIKAAYPDLENAPLIVTPSQQP---KFGDYQCNSAMGISQMLKS 127

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  +Q+ +++
Sbjct: 128  KEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSQQLSNLL 179

Query: 592  VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
            VNGVQ P L +  +V++DFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNHVG
Sbjct: 180  VNGVQLPALGENKKVVIDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVG 239

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ 
Sbjct: 240  DWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQG 299

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E KG +++DD
Sbjct: 300  RNPDIIKAWKLICDVSRQEFDKIYDALDISLIERGESFYQDRMNDIVEEFESKGFVQVDD 359

Query: 772  GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            GRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKAD I+YV D GQ VHF+ 
Sbjct: 360  GRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLYEEKADIIIYVVDSGQSVHFQT 418

Query: 832  LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
            +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DKLK
Sbjct: 419  VFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLRDLLEEGLKRSMDKLK 478

Query: 892  DKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
            +K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLYA+
Sbjct: 479  EKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYAF 538

Query: 952  TRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
            TRI SIAR A I+   L+ AAQ T + L+HEKE+ L + +LR  ++L  +  DL LH LC
Sbjct: 539  TRIRSIARLANIDEGMLQKAAQDTRIVLDHEKEWKLGRCILRFPEILQKILDDLFLHTLC 598

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            +Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 599  DYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 655



 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/429 (50%), Positives = 300/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G  S  A+ ++   + +N KLK+R+ IL++++  E  KQ   
Sbjct: 15  QEKEIKSLTAEIDRLKNCG--SLEASPNLEQLREENLKLKYRINILRKSLQAERSKQ--- 69

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                             ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 70  -----------------TKNMININSRLQEVFGRAIKAAYPDLENAPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKSKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  +Q+ +++VNGVQ P L +  +V++DFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSQQLSNLLVNGVQLPALGENKKVVIDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 CRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGRNPDIIKAWKLICDVSRQEFDKIYDALDISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E KG +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEK
Sbjct: 342 MNDIVEEFESKGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLYEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADIIIYVVD 409



 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/351 (57%), Positives = 266/351 (75%), Gaps = 12/351 (3%)

Query: 1099 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ K 
Sbjct: 71   KNMININSRLQEVFGRAIKAAYPDLENAPLIVTPSQQP---KFGDYQCNSAMGISQMLKS 127

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  +Q+ +++
Sbjct: 128  KEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSQQLSNLL 179

Query: 1219 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
            VNGVQ P L +  +V++DFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNHVG
Sbjct: 180  VNGVQLPALGENKKVVIDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVG 239

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ 
Sbjct: 240  DWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQG 299

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E KG +++DD
Sbjct: 300  RNPDIIKAWKLICDVSRQEFDKIYDALDISLIERGESFYQDRMNDIVEEFESKGFVQVDD 359

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            GRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKAD I+YV D
Sbjct: 360  GRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLYEEKADIIIYVVD 409


>gi|328698412|ref|XP_001947348.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
            pisum]
          Length = 592

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/604 (56%), Positives = 447/604 (74%), Gaps = 19/604 (3%)

Query: 467  MNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC 526
            +NV     +++   L  +F++A++ A+P L D      S   K    F D+QCN +M +C
Sbjct: 4    VNVEEHAFINLHSILISLFSNAIKTAYPALEDFGKPAVSAGSK----FADYQCNASMQIC 59

Query: 527  KIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ 586
            K+ K KGE  +P        +VV  +L        +I+K++V+  GF+NV+LSR    + 
Sbjct: 60   KLLKAKGENVSP--------NVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDI 111

Query: 587  IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
            ++ ++ N ++P  L    +++VDFS+PN+AKEMHVGHLRSTIIG+++SR+ E++GHDV+R
Sbjct: 112  LQYVLENKLKPKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVLR 171

Query: 647  LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            +NH+GDWGTQFGMLIA LQDKFP+Y T+SPPI DLQ FYK+SK  FD D  FKKRAY CV
Sbjct: 172  INHIGDWGTQFGMLIALLQDKFPNYKTESPPIKDLQQFYKQSKVLFDSDLEFKKRAYDCV 231

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ   PD+ +AW++ICDVSR++FQKIY+RLN+++ ERGESFYQ  ME +V  LE KG 
Sbjct: 232  VKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIERGESFYQSRMETVVKDLEDKGF 291

Query: 767  LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            LE DDGRKIMW  +  SIP+T+VKSDGGFTYDTSD+A ++QRIEEEKADWI+YV D GQ 
Sbjct: 292  LENDDGRKIMWSPE-SSIPLTVVKSDGGFTYDTSDIATLKQRIEEEKADWIIYVVDAGQS 350

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
            +HF  L++CA  +G L+P+K RMDFVGFGVVLGED+KKFKTRSGDTV+L+ LLDEG++R+
Sbjct: 351  LHFETLKKCAIHSGFLDPSKVRMDFVGFGVVLGEDKKKFKTRSGDTVRLASLLDEGIKRT 410

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
             DKL +K R   LT  EL  A+ A+AYGCIKYADL HNRN DYVFSFDKMLDD+GNTAVY
Sbjct: 411  RDKLVEKGRDKVLTDEELKLAETALAYGCIKYADLCHNRNHDYVFSFDKMLDDKGNTAVY 470

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            LLYA TRI SI    G  ++DL     +  +SL+H+KE+ LAKTLLR  +V+  +T D C
Sbjct: 471  LLYALTRIRSIINNLGTYTQDL-----NESISLDHDKEWKLAKTLLRFPEVISKITDDFC 525

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILN 1065
            LHHLCEYLYD++T FSEFYDNCYCIEK+ + G+I  V TGR+LL + TA+ M+   ++L 
Sbjct: 526  LHHLCEYLYDVATTFSEFYDNCYCIEKNPQTGEIVKVFTGRILLCKVTAEYMETGLNLLG 585

Query: 1066 IRTA 1069
            I T 
Sbjct: 586  ISTV 589



 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/356 (53%), Positives = 258/356 (72%), Gaps = 13/356 (3%)

Query: 77  MNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC 136
           +NV     +++   L  +F++A++ A+P L D      S   K    F D+QCN +M +C
Sbjct: 4   VNVEEHAFINLHSILISLFSNAIKTAYPALEDFGKPAVSAGSK----FADYQCNASMQIC 59

Query: 137 KIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ 196
           K+ K KGE  +P        +VV  +L        +I+K++V+  GF+NV+LSR    + 
Sbjct: 60  KLLKAKGENVSP--------NVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDI 111

Query: 197 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
           ++ ++ N ++P  L    +++VDFS+PN+AKEMHVGHLRSTIIG+++SR+ E++GHDV+R
Sbjct: 112 LQYVLENKLKPKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVLR 171

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           +NH+GDWGTQFGMLIA LQDKFP+Y T+SPPI DLQ FYK+SK  FD D  FKKRAY CV
Sbjct: 172 INHIGDWGTQFGMLIALLQDKFPNYKTESPPIKDLQQFYKQSKVLFDSDLEFKKRAYDCV 231

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ   PD+ +AW++ICDVSR++FQKIY+RLN+++ ERGESFYQ  ME +V  LE KG 
Sbjct: 232 VKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIERGESFYQSRMETVVKDLEDKGF 291

Query: 377 LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           LE DDGRKIMW  +  SIP+T+VKSDGGFTYDTSD+A ++QRIEEEKADWI+YV D
Sbjct: 292 LENDDGRKIMWSPE-SSIPLTVVKSDGGFTYDTSDIATLKQRIEEEKADWIIYVVD 346



 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/356 (53%), Positives = 258/356 (72%), Gaps = 13/356 (3%)

Query: 1094 MNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC 1153
            +NV     +++   L  +F++A++ A+P L D      S   K    F D+QCN +M +C
Sbjct: 4    VNVEEHAFINLHSILISLFSNAIKTAYPALEDFGKPAVSAGSK----FADYQCNASMQIC 59

Query: 1154 KIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ 1213
            K+ K KGE  +P        +VV  +L        +I+K++V+  GF+NV+LSR    + 
Sbjct: 60   KLLKAKGENVSP--------NVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDI 111

Query: 1214 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
            ++ ++ N ++P  L    +++VDFS+PN+AKEMHVGHLRSTIIG+++SR+ E++GHDV+R
Sbjct: 112  LQYVLENKLKPKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVLR 171

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            +NH+GDWGTQFGMLIA LQDKFP+Y T+SPPI DLQ FYK+SK  FD D  FKKRAY CV
Sbjct: 172  INHIGDWGTQFGMLIALLQDKFPNYKTESPPIKDLQQFYKQSKVLFDSDLEFKKRAYDCV 231

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ   PD+ +AW++ICDVSR++FQKIY+RLN+++ ERGESFYQ  ME +V  LE KG 
Sbjct: 232  VKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIERGESFYQSRMETVVKDLEDKGF 291

Query: 1394 LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            LE DDGRKIMW  +  SIP+T+VKSDGGFTYDTSD+A ++QRIEEEKADWI+YV D
Sbjct: 292  LENDDGRKIMWSPE-SSIPLTVVKSDGGFTYDTSDIATLKQRIEEEKADWIIYVVD 346


>gi|291230340|ref|XP_002735133.1| PREDICTED: Arginyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 666

 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/590 (59%), Positives = 449/590 (76%), Gaps = 19/590 (3%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVA-STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 539
            L+ VF  A++ A PEL D   +++ ST EK    FG++QCN AM + +  K  G KK+P 
Sbjct: 86   LNSVFEGAIKAAAPELADPPIAISLSTAEK----FGEYQCNSAMGISQQLKGLGIKKSPR 141

Query: 540  DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 599
            +IA++I           PS  ++I+K+E+A PGF+N+ L++ +   ++ +++V GV+PP 
Sbjct: 142  EIAETIVK------GLPPS--EMIEKVEIAGPGFINIHLTKSFVSHKLNELLVIGVRPPP 193

Query: 600  LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
            + +K RV+VD SSPNIAKEMHVGHLRSTIIGD+ISRL E+LGHDV+RLNH+GDWGTQFGM
Sbjct: 194  IGRKKRVVVDMSSPNIAKEMHVGHLRSTIIGDSISRLYEFLGHDVLRLNHIGDWGTQFGM 253

Query: 660  LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 719
            LIAHL DKFP+Y+ +SPPI DLQ FYKESK RFD +E FKKRAY  VV LQ  +PD  KA
Sbjct: 254  LIAHLMDKFPNYVAESPPIGDLQDFYKESKIRFDNEEEFKKRAYSLVVKLQAKEPDITKA 313

Query: 720  WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-- 777
            W +ICDVSRR+FQKIYDRL++ + ERGESFYQ  M   V  LE KG++E+DDGRK+++  
Sbjct: 314  WNLICDVSRREFQKIYDRLDIKIVERGESFYQDMMGDTVRALEAKGVVEVDDGRKVVFVP 373

Query: 778  GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAK 837
            G D   +P+T+VKSDGG TYDTSD+AA+  R+ +E AD I+YV D GQG+HF L+    K
Sbjct: 374  GHD---VPLTVVKSDGGNTYDTSDMAALHHRLFDEHADVILYVVDAGQGLHFNLIFAAGK 430

Query: 838  KAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT 897
              G  +P+ TR++ +GFGVVLGED+KKFKTRSG+T++L++LL+EGL+RSL KLKDKNRH 
Sbjct: 431  LVGWYDPSSTRVEHIGFGVVLGEDKKKFKTRSGETIRLADLLEEGLKRSLQKLKDKNRHE 490

Query: 898  ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI 957
             LT  EL  AQ++VAYGCIKY+DLSHNR  DYVFSFDKMLDD+GNTA YLLYA+TRI SI
Sbjct: 491  ILTAEELKAAQESVAYGCIKYSDLSHNRVNDYVFSFDKMLDDKGNTAAYLLYAFTRIRSI 550

Query: 958  ARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017
            AR A I+ + L+ AA++T V L+H KE+ L K LLR+ D+L+ V  DLC+H LC+YLY+I
Sbjct: 551  ARLANIDRDTLKKAAETTAVDLDHPKEWKLGKCLLRLPDILLRVLDDLCMHTLCDYLYEI 610

Query: 1018 STAFSEFYDNCYCIEKDAEGK-IKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            ST F+EFYD+CYC+EKD + K I  V+  RLLL EATA VM+  F IL I
Sbjct: 611  STTFTEFYDHCYCVEKDRQTKEIIKVNMSRLLLCEATANVMECGFSILGI 660



 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/398 (53%), Positives = 279/398 (70%), Gaps = 38/398 (9%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N KLK+RL  L+R++AEEE +               K M   + D       L+ VF  
Sbjct: 53  ENEKLKYRLNTLKRSLAEEESRY-------------EKVMPSLLVD-------LNSVFEG 92

Query: 98  AVQVAFPELGDKTASVA-STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 156
           A++ A PEL D   +++ ST EK    FG++QCN AM + +  K  G KK+P +IA++I 
Sbjct: 93  AIKAAAPELADPPIAISLSTAEK----FGEYQCNSAMGISQQLKGLGIKKSPREIAETIV 148

Query: 157 SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRV 216
                     PS  ++I+K+E+A PGF+N+ L++ +   ++ +++V GV+PP + +K RV
Sbjct: 149 K------GLPPS--EMIEKVEIAGPGFINIHLTKSFVSHKLNELLVIGVRPPPIGRKKRV 200

Query: 217 LVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD 276
           +VD SSPNIAKEMHVGHLRSTIIGD+ISRL E+LGHDV+RLNH+GDWGTQFGMLIAHL D
Sbjct: 201 VVDMSSPNIAKEMHVGHLRSTIIGDSISRLYEFLGHDVLRLNHIGDWGTQFGMLIAHLMD 260

Query: 277 KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDV 336
           KFP+Y+ +SPPI DLQ FYKESK RFD +E FKKRAY  VV LQ  +PD  KAW +ICDV
Sbjct: 261 KFPNYVAESPPIGDLQDFYKESKIRFDNEEEFKKRAYSLVVKLQAKEPDITKAWNLICDV 320

Query: 337 SRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--GEDRGSI 394
           SRR+FQKIYDRL++ + ERGESFYQ  M   V  LE KG++E+DDGRK+++  G D   +
Sbjct: 321 SRREFQKIYDRLDIKIVERGESFYQDMMGDTVRALEAKGVVEVDDGRKVVFVPGHD---V 377

Query: 395 PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           P+T+VKSDGG TYDTSD+AA+  R+ +E AD I+YV D
Sbjct: 378 PLTVVKSDGGNTYDTSDMAALHHRLFDEHADVILYVVD 415



 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/345 (56%), Positives = 257/345 (74%), Gaps = 18/345 (5%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVA-STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 1166
            L+ VF  A++ A PEL D   +++ ST EK    FG++QCN AM + +  K  G KK+P 
Sbjct: 86   LNSVFEGAIKAAAPELADPPIAISLSTAEK----FGEYQCNSAMGISQQLKGLGIKKSPR 141

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 1226
            +IA++I           PS  ++I+K+E+A PGF+N+ L++ +   ++ +++V GV+PP 
Sbjct: 142  EIAETIVK------GLPPS--EMIEKVEIAGPGFINIHLTKSFVSHKLNELLVIGVRPPP 193

Query: 1227 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
            + +K RV+VD SSPNIAKEMHVGHLRSTIIGD+ISRL E+LGHDV+RLNH+GDWGTQFGM
Sbjct: 194  IGRKKRVVVDMSSPNIAKEMHVGHLRSTIIGDSISRLYEFLGHDVLRLNHIGDWGTQFGM 253

Query: 1287 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 1346
            LIAHL DKFP+Y+ +SPPI DLQ FYKESK RFD +E FKKRAY  VV LQ  +PD  KA
Sbjct: 254  LIAHLMDKFPNYVAESPPIGDLQDFYKESKIRFDNEEEFKKRAYSLVVKLQAKEPDITKA 313

Query: 1347 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-- 1404
            W +ICDVSRR+FQKIYDRL++ + ERGESFYQ  M   V  LE KG++E+DDGRK+++  
Sbjct: 314  WNLICDVSRREFQKIYDRLDIKIVERGESFYQDMMGDTVRALEAKGVVEVDDGRKVVFVP 373

Query: 1405 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G D   +P+T+VKSDGG TYDTSD+AA+  R+ +E AD I+YV D
Sbjct: 374  GHD---VPLTVVKSDGGNTYDTSDMAALHHRLFDEHADVILYVVD 415


>gi|74211969|dbj|BAE40154.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/599 (58%), Positives = 451/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGV+ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  LLVNGVELPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRF  DE FK+RAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFGADEEFKERAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ +HF
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            +++   A+  G  +P  T +  VGFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417  QIIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+   L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 655



 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/444 (51%), Positives = 308/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S + + L  +  N KLK+RL IL+R++ EE +K    
Sbjct: 15  QEREIKALTAEIDRLKNCGCLEASPSLEQLREE--NLKLKYRLNILRRSLQEERRK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K +P +IA++I    T  L  N    K IDK+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGV+ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVELPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRF 
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFG 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            DE FK+RAYQCVV LQ  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  
Sbjct: 282 ADEEFKERAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDHRS--YHQVLQAIAE 445
           A+ I+YV D+    + Q++ A A+
Sbjct: 401 ANKIIYVVDNGQAIHFQIIFAAAQ 424



 Score =  425 bits (1092), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/354 (58%), Positives = 267/354 (75%), Gaps = 12/354 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGV+ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  LLVNGVELPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRF  DE FK+RAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFGADEEFKERAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410


>gi|12847471|dbj|BAB27583.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/599 (58%), Positives = 449/599 (74%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
             +VNGVQ P L  K +V+VDFSSPNIAKEMHV HLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  HLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVVHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ +HF
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  T +  VGFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RSLDK
Sbjct: 417  QTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSLDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+   L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 655



 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/430 (52%), Positives = 300/430 (69%), Gaps = 34/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S + + L  +  N KLK+RL IL+R++ EE +K    
Sbjct: 15  QEREIKALTAEIDRLKNCGCLEASPSLEQLREE--NLKLKYRLNILRRSLQEERRK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K +P +IA++I    T  L  N    K IDK+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+   +VNGVQ P L  K +V+VDFSSPNIAKEMHV HLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSHLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVVHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            DE FKKRAYQCVV LQ  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  
Sbjct: 282 ADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH 433
           A+ I+YV D+
Sbjct: 401 ANKIIYVVDN 410



 Score =  424 bits (1091), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/354 (58%), Positives = 266/354 (75%), Gaps = 12/354 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
             +VNGVQ P L  K +V+VDFSSPNIAKEMHV HLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  HLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVVHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410


>gi|301766472|ref|XP_002918656.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
            melanoleuca]
          Length = 660

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/599 (57%), Positives = 451/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +I 
Sbjct: 69   PTKNMININSQLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQIL 125

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K NP +IA++I    T  L  N    + ++K+E+A PGF+NV L + +  +Q+ +
Sbjct: 126  KTKEQKVNPREIAENI----TRHLPDN----ECVEKVEIAGPGFINVHLRKDFVSQQLTN 177

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 178  LLVNGVKLPALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 237

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEDFKKRAYQCVVLL 297

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW++ICDVSR++F +IY  L+++L ERGESFYQ  M  +V   E KG +++
Sbjct: 298  QSKNPDIIKAWKLICDVSRQEFNRIYGALDISLIERGESFYQDRMNDIVEEFEDKGFVQV 357

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKAD I+YV D GQ VHF
Sbjct: 358  DDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYVVDSGQSVHF 416

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+ AG  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417  QTIFGAAQMAGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDK 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477  LKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+   L+ AAQ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 537  AFTRIRSIARLANIDEGMLQKAAQETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + G++  V+  R+LL EA A VM K FDIL I+
Sbjct: 597  LCDYIYELATTFTEFYDSCYCVEKDRQTGQVLKVNMWRMLLCEAVAAVMAKAFDILGIK 655



 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/429 (50%), Positives = 300/429 (69%), Gaps = 34/429 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   +++++L   G +   A+ ++   + +N KLK+RL IL++++  E  +    
Sbjct: 15  QEKEIKSLTAEIDQLKNSGCLE--ASPNLQQLREENLKLKYRLNILRKSLQAERTR---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSQLQEVFGCAIKAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + +I K K +K NP +IA++I    T  L  N    + ++K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQILKTKEQKVNPREIAENI----TRHLPDN----ECVEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  +Q+ +++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSQQLTNLLVNGVKLPALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 CRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F +IY  L+++L ERGESFYQ  
Sbjct: 282 TEEDFKKRAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNRIYGALDISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E KG +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEK
Sbjct: 342 MNDIVEEFEDKGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEK 400

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 401 ADMIIYVVD 409



 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/353 (56%), Positives = 266/353 (75%), Gaps = 12/353 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +I 
Sbjct: 69   PTKNMININSQLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQIL 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K NP +IA++I    T  L  N    + ++K+E+A PGF+NV L + +  +Q+ +
Sbjct: 126  KTKEQKVNPREIAENI----TRHLPDN----ECVEKVEIAGPGFINVHLRKDFVSQQLTN 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 178  LLVNGVKLPALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEDFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW++ICDVSR++F +IY  L+++L ERGESFYQ  M  +V   E KG +++
Sbjct: 298  QSKNPDIIKAWKLICDVSRQEFNRIYGALDISLIERGESFYQDRMNDIVEEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKAD I+YV D
Sbjct: 358  DDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYVVD 409


>gi|56403814|emb|CAI29693.1| hypothetical protein [Pongo abelii]
          Length = 659

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/601 (58%), Positives = 452/601 (75%), Gaps = 14/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ ++V   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINVISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDMMNDIVKEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TI+KSDGG+TYDTSDLAAI+QR+ EEKA  I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKA-MIIYVVDNGQSV 413

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL EGL+RS+
Sbjct: 414  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSM 473

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ ++AYGC+KYADLSHNR  DY+FSFDKMLDD+GNTA YL
Sbjct: 474  DKLKEKERDKVLTAEELNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKMLDDKGNTAAYL 533

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 534  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 593

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 594  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 653

Query: 1067 R 1067
            +
Sbjct: 654  K 654



 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/444 (51%), Positives = 308/444 (69%), Gaps = 37/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  SA  + L  Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASANLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ ++V   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINVISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDM 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TI+KSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTILKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           A  I+YV D+ +S H Q + A A+
Sbjct: 401 A-MIIYVVDNGQSVHFQTIFAAAQ 423



 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/361 (57%), Positives = 271/361 (75%), Gaps = 14/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ ++V   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINVISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDMMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TI+KSDGG+TYDTSDLAAI+QR+ EEKA  I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKA-MIIYVVDNGQSV 413

Query: 1454 H 1454
            H
Sbjct: 414  H 414


>gi|195457058|ref|XP_002075407.1| GK15297 [Drosophila willistoni]
 gi|194171492|gb|EDW86393.1| GK15297 [Drosophila willistoni]
          Length = 649

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/600 (58%), Positives = 442/600 (73%), Gaps = 26/600 (4%)

Query: 441  QAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKT 500
            QAI++E  K G ++ S S              D +S+ ++L  V   A+  AFP+L    
Sbjct: 65   QAISDESGKGGSTARSFSLND-----------DSLSIIEHLRSVLAIAITTAFPQLSHTP 113

Query: 501  ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 560
              +  +      KFGD+QCN+AMAL K  KD G  K+P D+A        +EL  +  ++
Sbjct: 114  VLLTPSI-----KFGDYQCNNAMALAKKLKDIGIGKSPRDVA--------TELINSCPVS 160

Query: 561  KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
              I K+EVA PGF+N+FL++ Y    I D++ NGV+PP + KK RVLVDFSSPNIAK+MH
Sbjct: 161  PRIGKLEVAGPGFINIFLNKDYGVRAITDLLRNGVKPPKVPKK-RVLVDFSSPNIAKQMH 219

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
            VGHLRSTIIG++I RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP++L +SPPI D
Sbjct: 220  VGHLRSTIIGESICRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNFLNESPPIGD 279

Query: 681  LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 740
            LQAFYKESKKRFDEDE+FKKRAY  VVALQ  DP+  KAW++ICDVSR++F+ IYDRL +
Sbjct: 280  LQAFYKESKKRFDEDEVFKKRAYNAVVALQGGDPNSIKAWQLICDVSRKEFKTIYDRLEI 339

Query: 741  TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-GEDRGSIPMTIVKSDGGFTYDT 799
             + ERGESFYQ  M  +V +L K+ +LE+DDGR+IMW  E +  IP+TIVKSDGGFTYDT
Sbjct: 340  NVKERGESFYQSRMLTVVDFLRKQNMLEVDDGREIMWPDESKTGIPLTIVKSDGGFTYDT 399

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            SD+AAIR RIEEE  DW+VYV D GQ  HF  + + AK+ GI  P   R D V FGVVLG
Sbjct: 400  SDMAAIRHRIEEELCDWLVYVVDSGQSTHFATIFKAAKRCGIFQPKVHRADHVQFGVVLG 459

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            ED KKFKTRSGDTVKL++LLDEG++RSL++L+ + R   LTP EL +AQ+AVAYGCIKY 
Sbjct: 460  EDGKKFKTRSGDTVKLADLLDEGMKRSLEQLRSRGRDQVLTPQELLDAQEAVAYGCIKYT 519

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DL HNR  DYVFSFDKMLDDRGNTAVYLLY YTRI SIAR +G +  +L    ++  ++L
Sbjct: 520  DLCHNRISDYVFSFDKMLDDRGNTAVYLLYTYTRICSIARNSGEDFSNLSKILETIDITL 579

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
             H+KE+ L  TLL+++DVL+  +RDL LH LCE+ Y++ TAF+EFYD+CYCIEK+  G+I
Sbjct: 580  THDKEWKLVSTLLKLHDVLVKCSRDLFLHFLCEFCYEVCTAFAEFYDSCYCIEKNKAGQI 639



 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/425 (54%), Positives = 302/425 (71%), Gaps = 29/425 (6%)

Query: 30  EDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRD 89
           ++++  Q +NTKLKHRLAIL +AI++E  K G ++   S              D +S+ +
Sbjct: 44  DELIKLQTENTKLKHRLAILNQAISDESGKGGSTARSFSLND-----------DSLSIIE 92

Query: 90  YLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 149
           +L  V   A+  AFP+L      +  +      KFGD+QCN+AMAL K  KD G  K+P 
Sbjct: 93  HLRSVLAIAITTAFPQLSHTPVLLTPSI-----KFGDYQCNNAMALAKKLKDIGIGKSPR 147

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 209
           D+A        +EL  +  ++  I K+EVA PGF+N+FL++ Y    I D++ NGV+PP 
Sbjct: 148 DVA--------TELINSCPVSPRIGKLEVAGPGFINIFLNKDYGVRAITDLLRNGVKPPK 199

Query: 210 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
           + KK RVLVDFSSPNIAK+MHVGHLRSTIIG++I RLLE+L HDV+R+NH+GDWGTQFGM
Sbjct: 200 VPKK-RVLVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFLQHDVIRINHLGDWGTQFGM 258

Query: 270 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 329
           LIAHL+D+FP++L +SPPI DLQAFYKESKKRFDEDE+FKKRAY  VVALQ  DP+  KA
Sbjct: 259 LIAHLEDRFPNFLNESPPIGDLQAFYKESKKRFDEDEVFKKRAYNAVVALQGGDPNSIKA 318

Query: 330 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-G 388
           W++ICDVSR++F+ IYDRL + + ERGESFYQ  M  +V +L K+ +LE+DDGR+IMW  
Sbjct: 319 WQLICDVSRKEFKTIYDRLEINVKERGESFYQSRMLTVVDFLRKQNMLEVDDGREIMWPD 378

Query: 389 EDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYHQVLQAIAEEE 447
           E +  IP+TIVKSDGGFTYDTSD+AAIR RIEEE  DW+VYV D  +S H     I +  
Sbjct: 379 ESKTGIPLTIVKSDGGFTYDTSDMAAIRHRIEEELCDWLVYVVDSGQSTH--FATIFKAA 436

Query: 448 KKQGI 452
           K+ GI
Sbjct: 437 KRCGI 441



 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/351 (59%), Positives = 265/351 (75%), Gaps = 15/351 (4%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            D +S+ ++L  V   A+  AFP+L      +  +      KFGD+QCN+AMAL K  KD 
Sbjct: 86   DSLSIIEHLRSVLAIAITTAFPQLSHTPVLLTPSI-----KFGDYQCNNAMALAKKLKDI 140

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
            G  K+P D+A        +EL  +  ++  I K+EVA PGF+N+FL++ Y    I D++ 
Sbjct: 141  GIGKSPRDVA--------TELINSCPVSPRIGKLEVAGPGFINIFLNKDYGVRAITDLLR 192

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            NGV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG++I RLLE+L HDV+R+NH+GD
Sbjct: 193  NGVKPPKVPKK-RVLVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFLQHDVIRINHLGD 251

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGTQFGMLIAHL+D+FP++L +SPPI DLQAFYKESKKRFDEDE+FKKRAY  VVALQ  
Sbjct: 252  WGTQFGMLIAHLEDRFPNFLNESPPIGDLQAFYKESKKRFDEDEVFKKRAYNAVVALQGG 311

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            DP+  KAW++ICDVSR++F+ IYDRL + + ERGESFYQ  M  +V +L K+ +LE+DDG
Sbjct: 312  DPNSIKAWQLICDVSRKEFKTIYDRLEINVKERGESFYQSRMLTVVDFLRKQNMLEVDDG 371

Query: 1400 RKIMW-GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            R+IMW  E +  IP+TIVKSDGGFTYDTSD+AAIR RIEEE  DW+VYV D
Sbjct: 372  REIMWPDESKTGIPLTIVKSDGGFTYDTSDMAAIRHRIEEELCDWLVYVVD 422


>gi|344265245|ref|XP_003404695.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Loxodonta africana]
          Length = 660

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/601 (57%), Positives = 451/601 (75%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + + K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLRTKEQKVNPREIAENI----TKHLPPN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+ V+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYSVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFY+ESKKRFD +E FK+RAYQCVV
Sbjct: 236  NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYRESKKRFDTEEEFKRRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  + D  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V   E KG +
Sbjct: 296  LLQSKNLDIIKAWKLICDVSRQEFNKIYNALDISLIERGESFYQDRMNDVVKEFEDKGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ +
Sbjct: 356  QVDDGRKIVFVPGY-SVPLTIVKSDGGYTYDTSDLAAIKQRLLEEKADMIIYVVDNGQSM 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LTP EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTPEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AAQ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLASIDDEMLQKAAQETKIILDHEKEWKLGRCILRFPEILQKILDDLLL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  428 bits (1100), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/444 (49%), Positives = 306/444 (68%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +   A+ D+   + +N KLK+RL IL+R++  E  K    
Sbjct: 15  QEKEIKFLTAEIDRLKNCGCLE--ASPDLEQLRAENLKLKYRLNILRRSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ + K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLRTKEQKVNPREIAENI----TKHLPPN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G+ V+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFY+ESKKRFD
Sbjct: 222 CRLFEFAGYSVLRLNHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYRESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FK+RAYQCVV LQ  + D  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  
Sbjct: 282 TEEEFKRRAYQCVVLLQSKNLDIIKAWKLICDVSRQEFNKIYNALDISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDVVKEFEDKGFVQVDDGRKIVFVPGY-SVPLTIVKSDGGYTYDTSDLAAIKQRLLEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSMHFQTIFAAAQ 424



 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/361 (55%), Positives = 269/361 (74%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + + K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLRTKEQKVNPREIAENI----TKHLPPN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+ V+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYSVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFY+ESKKRFD +E FK+RAYQCVV
Sbjct: 236  NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYRESKKRFDTEEEFKRRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  + D  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V   E KG +
Sbjct: 296  LLQSKNLDIIKAWKLICDVSRQEFNKIYNALDISLIERGESFYQDRMNDVVKEFEDKGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPGY-SVPLTIVKSDGGYTYDTSDLAAIKQRLLEEKADMIIYVVDNGQSM 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|281338995|gb|EFB14579.1| hypothetical protein PANDA_007149 [Ailuropoda melanoleuca]
          Length = 645

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/599 (57%), Positives = 451/599 (75%), Gaps = 13/599 (2%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +I 
Sbjct: 54   PTKNMININSQLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQIL 110

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K +K NP +IA++I    T  L  N    + ++K+E+A PGF+NV L + +  +Q+ +
Sbjct: 111  KTKEQKVNPREIAENI----TRHLPDN----ECVEKVEIAGPGFINVHLRKDFVSQQLTN 162

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 163  LLVNGVKLPALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 222

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 223  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEDFKKRAYQCVVLL 282

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  +PD  KAW++ICDVSR++F +IY  L+++L ERGESFYQ  M  +V   E KG +++
Sbjct: 283  QSKNPDIIKAWKLICDVSRQEFNRIYGALDISLIERGESFYQDRMNDIVEEFEDKGFVQV 342

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKAD I+YV D GQ VHF
Sbjct: 343  DDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYVVDSGQSVHF 401

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+ AG  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 402  QTIFGAAQMAGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDK 461

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 462  LKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 521

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+   L+ AAQ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 522  AFTRIRSIARLANIDEGMLQKAAQETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 581

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LC+Y+Y+++T F+EFYD+CYC+EKD + G++  V+  R+LL EA A VM K FDIL I+
Sbjct: 582  LCDYIYELATTFTEFYDSCYCVEKDRQTGQVLKVNMWRMLLCEAVAAVMAKAFDILGIK 640



 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/428 (50%), Positives = 299/428 (69%), Gaps = 34/428 (7%)

Query: 5   ELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISS 64
           E ++K   +++++L   G +   A+ ++   + +N KLK+RL IL++++  E  +     
Sbjct: 1   EKEIKSLTAEIDQLKNSGCLE--ASPNLQQLREENLKLKYRLNILRKSLQAERTR----- 53

Query: 65  SISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKF 124
                          P ++ +++   L +VF  A++ A+P+L +    V  + +    KF
Sbjct: 54  ---------------PTKNMININSQLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KF 95

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD+QCN AM + +I K K +K NP +IA++I    T  L  N    + ++K+E+A PGF+
Sbjct: 96  GDYQCNSAMGISQILKTKEQKVNPREIAENI----TRHLPDN----ECVEKVEIAGPGFI 147

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           NV L + +  +Q+ +++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ 
Sbjct: 148 NVHLRKDFVSQQLTNLLVNGVKLPALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESMC 207

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           RL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD 
Sbjct: 208 RLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDT 267

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 364
           +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F +IY  L+++L ERGESFYQ  M
Sbjct: 268 EEDFKKRAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNRIYGALDISLIERGESFYQDRM 327

Query: 365 EQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKA 424
             +V   E KG +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKA
Sbjct: 328 NDIVEEFEDKGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKA 386

Query: 425 DWIVYVTD 432
           D I+YV D
Sbjct: 387 DMIIYVVD 394



 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/353 (56%), Positives = 266/353 (75%), Gaps = 12/353 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +I 
Sbjct: 54   PTKNMININSQLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQIL 110

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K NP +IA++I    T  L  N    + ++K+E+A PGF+NV L + +  +Q+ +
Sbjct: 111  KTKEQKVNPREIAENI----TRHLPDN----ECVEKVEIAGPGFINVHLRKDFVSQQLTN 162

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGV+ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 163  LLVNGVKLPALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 222

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 223  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEDFKKRAYQCVVLL 282

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW++ICDVSR++F +IY  L+++L ERGESFYQ  M  +V   E KG +++
Sbjct: 283  QSKNPDIIKAWKLICDVSRQEFNRIYGALDISLIERGESFYQDRMNDIVEEFEDKGFVQV 342

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DDGRKI++     SIP+TIVKSDGG+TYDTSDLAA++QR+ EEKAD I+YV D
Sbjct: 343  DDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYVVD 394


>gi|417412168|gb|JAA52495.1| Putative arginyl-trna synthetase, partial [Desmodus rotundus]
          Length = 659

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/601 (57%), Positives = 449/601 (74%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P  + +++   L ++F  A++ A P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 66   NKPTENMININSRLQEIFGWAIRAAHPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQ 122

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K ++ NP +IA++I    T  L  N      I+K+E+A PGF+NV L + +  +Q+
Sbjct: 123  MLKTKEQRVNPREIAENI----TKHLPDN----DCIEKVEIAGPGFINVHLRKDFVSKQL 174

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
             +++VNG + P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RL
Sbjct: 175  TNLLVNGARLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRL 234

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 235  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 294

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  DPD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E +G +
Sbjct: 295  LLQSKDPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDVVKEFEDRGFV 354

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 355  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLHEEKADMIIYVVDNGQSV 413

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+
Sbjct: 414  HFQTIFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSM 473

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 474  DKLKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 533

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 534  LYAFTRIRSIARLASIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFL 593

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I
Sbjct: 594  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMCRMLLCEAVATVMAKGFDILGI 653

Query: 1067 R 1067
            +
Sbjct: 654  K 654



 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/444 (50%), Positives = 305/444 (68%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K    ++++L + G +  S   D+   + ++ KLK+RL IL+R++  E  K    
Sbjct: 14  QEKEIKSLTLEIDQLKSGGCLVTSP--DLEQLREESLKLKYRLNILRRSLQAERNK---- 67

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P  + +++   L ++F  A++ A P+L +    V  + +    K
Sbjct: 68  ----------------PTENMININSRLQEIFGWAIRAAHPDLENPPLVVTPSQQP---K 108

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K ++ NP +IA++I    T  L  N      I+K+E+A PGF
Sbjct: 109 FGDYQCNSAMGISQMLKTKEQRVNPREIAENI----TKHLPDN----DCIEKVEIAGPGF 160

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  +Q+ +++VNG + P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 161 INVHLRKDFVSKQLTNLLVNGARLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESM 220

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 221 CRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 280

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  DPD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  
Sbjct: 281 TEEEFKKRAYQCVVLLQSKDPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDR 340

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 341 MNDVVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLHEEK 399

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 400 ADMIIYVVDNGQSVHFQTIFAAAQ 423



 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/361 (56%), Positives = 268/361 (74%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P  + +++   L ++F  A++ A P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 66   NKPTENMININSRLQEIFGWAIRAAHPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQ 122

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K ++ NP +IA++I    T  L  N      I+K+E+A PGF+NV L + +  +Q+
Sbjct: 123  MLKTKEQRVNPREIAENI----TKHLPDN----DCIEKVEIAGPGFINVHLRKDFVSKQL 174

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
             +++VNG + P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RL
Sbjct: 175  TNLLVNGARLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRL 234

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 235  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 294

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  DPD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E +G +
Sbjct: 295  LLQSKDPDIIKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDVVKEFEDRGFV 354

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 355  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLHEEKADMIIYVVDNGQSV 413

Query: 1454 H 1454
            H
Sbjct: 414  H 414


>gi|242009305|ref|XP_002425430.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212509247|gb|EEB12692.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 575

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/519 (65%), Positives = 411/519 (79%), Gaps = 12/519 (2%)

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
           R   S+++ L  +F  A+Q AFPEL +    +A++N     KFGD+QCN AM + ++ K 
Sbjct: 55  RSFYSIQNTLVSIFKEAIQRAFPELKNAPVVIAASNNS---KFGDYQCNSAMPIVQLLKS 111

Query: 532 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
           +G+K NP ++A+ I S V+           +I+K+EVA  GF+NV LSR      ++ I+
Sbjct: 112 EGKKSNPREVAEKIKSCVSPH--------NLIEKLEVAGAGFINVTLSRTEGQNCLQFIL 163

Query: 592 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
            NGV PP +N K RV+VDFSSPNIAKEMHVGHLRSTIIGD+IS LLE+LGHDVVR+NHVG
Sbjct: 164 KNGVLPPKVNAKCRVIVDFSSPNIAKEMHVGHLRSTIIGDSISNLLEFLGHDVVRVNHVG 223

Query: 652 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
           DWGTQFGMLIAHL+DKFPDYLTKSPPI DLQAFYKESKKRFDEDE FKKRAY CVV LQ 
Sbjct: 224 DWGTQFGMLIAHLEDKFPDYLTKSPPIQDLQAFYKESKKRFDEDEAFKKRAYNCVVQLQS 283

Query: 712 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             PDY KAW +ICDVSR++FQKIY RL++ +TE+GESFYQ  ME+LV  LE K  L  D+
Sbjct: 284 HHPDYLKAWNLICDVSRKEFQKIYQRLDIRITEKGESFYQTRMEKLVKELEAKNFLVEDE 343

Query: 772 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
           GRKIMWG D  SIP TIVKSDGGFTYDTSDLA I+ RIEEEKADWI+YVTD GQ  HF +
Sbjct: 344 GRKIMWG-DSSSIPFTIVKSDGGFTYDTSDLACIKYRIEEEKADWIIYVTDSGQSTHFDV 402

Query: 832 LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
           L++CA K GILNP K R+DFVGFGVVLGED+KKFKTRSG+TV+L +L+DEGL+RSL+KLK
Sbjct: 403 LQKCAIKCGILNPEKVRIDFVGFGVVLGEDKKKFKTRSGETVRLVDLMDEGLKRSLEKLK 462

Query: 892 DKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
           +K R   LTP EL +AQ++VAYGCIKYADLSHNRN +YVFSF+KMLDDRGNTAVYLLYA 
Sbjct: 463 EKKRDEVLTPEELKKAQESVAYGCIKYADLSHNRNHEYVFSFEKMLDDRGNTAVYLLYAL 522

Query: 952 TRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKT 990
           TRI SIAR+AG+ S+ L  A+++T +SL+H+KE+ L K 
Sbjct: 523 TRIKSIARSAGVTSQQLLEASKTTQISLDHDKEWNLGKV 561



 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/417 (58%), Positives = 298/417 (71%), Gaps = 33/417 (7%)

Query: 31  DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSS-ISSQTKGAAKKMNVPVRDRMSVRD 89
           +++A   +N KLK+RL IL        K  GI+ + +S + +          R   S+++
Sbjct: 21  EIIALLNENKKLKYRLTIL--------KNSGINPNDVSCKEE----------RSFYSIQN 62

Query: 90  YLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 149
            L  +F  A+Q AFPEL +    +A++N     KFGD+QCN AM + ++ K +G+K NP 
Sbjct: 63  TLVSIFKEAIQRAFPELKNAPVVIAASNNS---KFGDYQCNSAMPIVQLLKSEGKKSNPR 119

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 209
           ++A+ I S V+           +I+K+EVA  GF+NV LSR      ++ I+ NGV PP 
Sbjct: 120 EVAEKIKSCVSPH--------NLIEKLEVAGAGFINVTLSRTEGQNCLQFILKNGVLPPK 171

Query: 210 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
           +N K RV+VDFSSPNIAKEMHVGHLRSTIIGD+IS LLE+LGHDVVR+NHVGDWGTQFGM
Sbjct: 172 VNAKCRVIVDFSSPNIAKEMHVGHLRSTIIGDSISNLLEFLGHDVVRVNHVGDWGTQFGM 231

Query: 270 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 329
           LIAHL+DKFPDYLTKSPPI DLQAFYKESKKRFDEDE FKKRAY CVV LQ   PDY KA
Sbjct: 232 LIAHLEDKFPDYLTKSPPIQDLQAFYKESKKRFDEDEAFKKRAYNCVVQLQSHHPDYLKA 291

Query: 330 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 389
           W +ICDVSR++FQKIY RL++ +TE+GESFYQ  ME+LV  LE K  L  D+GRKIMWG 
Sbjct: 292 WNLICDVSRKEFQKIYQRLDIRITEKGESFYQTRMEKLVKELEAKNFLVEDEGRKIMWG- 350

Query: 390 DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIA 444
           D  SIP TIVKSDGGFTYDTSDLA I+ RIEEEKADWI+YVTD    ++  VLQ  A
Sbjct: 351 DSSSIPFTIVKSDGGFTYDTSDLACIKYRIEEEKADWIIYVTDSGQSTHFDVLQKCA 407



 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/362 (63%), Positives = 274/362 (75%), Gaps = 14/362 (3%)

Query: 1099 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            R   S+++ L  +F  A+Q AFPEL +    +A++N     KFGD+QCN AM + ++ K 
Sbjct: 55   RSFYSIQNTLVSIFKEAIQRAFPELKNAPVVIAASNNS---KFGDYQCNSAMPIVQLLKS 111

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            +G+K NP ++A+ I S V+           +I+K+EVA  GF+NV LSR      ++ I+
Sbjct: 112  EGKKSNPREVAEKIKSCVSPH--------NLIEKLEVAGAGFINVTLSRTEGQNCLQFIL 163

Query: 1219 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
             NGV PP +N K RV+VDFSSPNIAKEMHVGHLRSTIIGD+IS LLE+LGHDVVR+NHVG
Sbjct: 164  KNGVLPPKVNAKCRVIVDFSSPNIAKEMHVGHLRSTIIGDSISNLLEFLGHDVVRVNHVG 223

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIAHL+DKFPDYLTKSPPI DLQAFYKESKKRFDEDE FKKRAY CVV LQ 
Sbjct: 224  DWGTQFGMLIAHLEDKFPDYLTKSPPIQDLQAFYKESKKRFDEDEAFKKRAYNCVVQLQS 283

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
              PDY KAW +ICDVSR++FQKIY RL++ +TE+GESFYQ  ME+LV  LE K  L  D+
Sbjct: 284  HHPDYLKAWNLICDVSRKEFQKIYQRLDIRITEKGESFYQTRMEKLVKELEAKNFLVEDE 343

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQV 1456
            GRKIMWG D  SIP TIVKSDGGFTYDTSDLA I+ RIEEEKADWI+YVTD    ++  V
Sbjct: 344  GRKIMWG-DSSSIPFTIVKSDGGFTYDTSDLACIKYRIEEEKADWIIYVTDSGQSTHFDV 402

Query: 1457 LQ 1458
            LQ
Sbjct: 403  LQ 404


>gi|440898441|gb|ELR49939.1| Arginyl-tRNA synthetase, cytoplasmic [Bos grunniens mutus]
          Length = 660

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/608 (56%), Positives = 453/608 (74%), Gaps = 13/608 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P +  +++   L +VF  A++ A+P L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKTMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM +C++ K K +K NP +IA++I       L  N    + I+K+E+A PGF+N+ L +
Sbjct: 117  SAMGICQMLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGFINIHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  +Q+ +++VNGV+ P++ +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ 
Sbjct: 169  GFVSQQLTNLLVNGVKIPSIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKK
Sbjct: 229  GYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDRMHDIVKE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ +HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+
Sbjct: 408  VDNGQSLHFQTVFGAAQMIGWYDPAVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLE 467

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDR
Sbjct: 468  EGLKRSMDKLKEKERDKVLTTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR 527

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E LR AA  T + L+HEKE+ L + +LR  +VL  
Sbjct: 528  GNTAAYLLYAFTRIRSIARLANIDEEMLRKAAHETEIILDHEKEWKLGRCILRFPEVLQK 587

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + G++  V+  R+LL EA A VM K
Sbjct: 588  ILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQSGEVLKVNMWRMLLCEAVAAVMAK 647

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 648  GFDILGIK 655



 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/435 (49%), Positives = 303/435 (69%), Gaps = 35/435 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L  K +    A+ D+   + +N KLK+RL IL++++  E  K    
Sbjct: 15  QEKEVKFLTAEIDRL--KNYSCSEASADLEKLREENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P +  +++   L +VF  A++ A+P L +    V  + +    K
Sbjct: 69  ----------------PTKTMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM +C++ K K +K NP +IA++I       L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGICQMLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L + +  +Q+ +++VNGV+ P++ +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INIHLRKGFVSQQLTNLLVNGVKIPSIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 CRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MHDIVKEFEDRGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH 437
           AD I+YV D+ +S H
Sbjct: 401 ADMIIYVVDNGQSLH 415



 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/361 (55%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P +  +++   L +VF  A++ A+P L +    V  + +    KFGD+QCN AM +C+
Sbjct: 67   NKPTKTMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---KFGDYQCNSAMGICQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I       L  N    + I+K+E+A PGF+N+ L + +  +Q+
Sbjct: 124  MLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGFINIHLRKGFVSQQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
             +++VNGV+ P++ +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G++V+RL
Sbjct: 176  TNLLVNGVKIPSIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYNVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDRMHDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSL 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|157427804|ref|NP_001098808.1| arginine--tRNA ligase, cytoplasmic [Bos taurus]
 gi|300681170|sp|A7YW98.1|SYRC_BOVIN RecName: Full=Arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|157278917|gb|AAI34469.1| RARS protein [Bos taurus]
 gi|296485074|tpg|DAA27189.1| TPA: arginyl-tRNA synthetase [Bos taurus]
          Length = 660

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/608 (56%), Positives = 453/608 (74%), Gaps = 13/608 (2%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P +  +++   L +VF  A++ A+P L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKTMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM +C++ K K +K NP +IA++I       L  N    + I+K+E+A PGF+N+ L +
Sbjct: 117  SAMGICQMLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGFINIHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  +Q+ +++VNGV+ P++ +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ 
Sbjct: 169  GFVSQQLTNLLVNGVKIPSIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKK
Sbjct: 229  GYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDRMHDIVKE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ +HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+
Sbjct: 408  VDNGQSLHFQTVFGAAQMIGWYDPAVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLE 467

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EGL+RS+DKLK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDR
Sbjct: 468  EGLKRSMDKLKEKERDKVLTTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR 527

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E LR AA  T + L+HEKE+ L + +LR  +VL  
Sbjct: 528  GNTAAYLLYAFTRIRSIARLANIDEEMLRKAAHETEIILDHEKEWKLGRCILRFPEVLQK 587

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + G++  V+  R+LL EA A VM K
Sbjct: 588  ILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQSGEVLKVNMWRMLLCEAVAAVMAK 647

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 648  GFDILGIK 655



 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/435 (49%), Positives = 303/435 (69%), Gaps = 35/435 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++V+ L  K +    A+ D+   + +N KLK+RL IL++++  E  K    
Sbjct: 15  QEKEIKFLTAEVDRL--KNYSCSEASADLEKLREENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P +  +++   L +VF  A++ A+P L +    V  + +    K
Sbjct: 69  ----------------PTKTMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM +C++ K K +K NP +IA++I       L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGICQMLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L + +  +Q+ +++VNGV+ P++ +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INIHLRKGFVSQQLTNLLVNGVKIPSIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 CRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MHDIVKEFEDRGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH 437
           AD I+YV D+ +S H
Sbjct: 401 ADMIIYVVDNGQSLH 415



 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/361 (55%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P +  +++   L +VF  A++ A+P L +    V  + +    KFGD+QCN AM +C+
Sbjct: 67   NKPTKTMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---KFGDYQCNSAMGICQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I       L  N    + I+K+E+A PGF+N+ L + +  +Q+
Sbjct: 124  MLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGFINIHLRKGFVSQQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
             +++VNGV+ P++ +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G++V+RL
Sbjct: 176  TNLLVNGVKIPSIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYNVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDRMHDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSL 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|149726104|ref|XP_001503321.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Equus caballus]
          Length = 658

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/594 (58%), Positives = 447/594 (75%), Gaps = 13/594 (2%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 72   ININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQMLKSKEQ 128

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 129  KVNPREIAENI----TKHLPGN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 180

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            VQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH+GDWG
Sbjct: 181  VQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWG 240

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 241  TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNP 300

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            D  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 301  DITKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRK 360

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ VH + +  
Sbjct: 361  IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHLQTIFA 419

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DKL++K 
Sbjct: 420  AAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLREKE 479

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLYA+TRI
Sbjct: 480  RDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRI 539

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
             SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH LC+Y+
Sbjct: 540  RSIARLANIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYI 599

Query: 1015 YDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 600  YELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 653



 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/441 (50%), Positives = 303/441 (68%), Gaps = 39/441 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   +++++L   G +  S   + L  +  N KLK+RL IL++++  E  +  + 
Sbjct: 15  QEKEIKSLTAEIDQLKNCGCLEASPNLEQLREE--NLKLKYRLNILRKSLQAERNRPTM- 71

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                                +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 72  ---------------------ININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---K 107

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 108 FGDYQCNSAMGISQMLKSKEQKVNPREIAENI----TKHLPGN----ECIEKVEIAGPGF 159

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 160 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESM 219

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 220 CRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 279

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  
Sbjct: 280 TEEEFKKRAYQCVVLLQSKNPDITKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDR 339

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 340 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 398

Query: 424 ADWIVYVTDH-RSYHQVLQAI 443
           AD I+YV D+ +S H  LQ I
Sbjct: 399 ADMIIYVVDNGQSVH--LQTI 417



 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/354 (57%), Positives = 267/354 (75%), Gaps = 13/354 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 72   ININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQMLKSKEQ 128

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 129  KVNPREIAENI----TKHLPGN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 180

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            VQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH+GDWG
Sbjct: 181  VQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWG 240

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 241  TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNP 300

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 301  DITKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRK 360

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH 1454
            I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S H
Sbjct: 361  IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVH 413


>gi|321455642|gb|EFX66770.1| hypothetical protein DAPPUDRAFT_302451 [Daphnia pulex]
          Length = 632

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/588 (57%), Positives = 440/588 (74%), Gaps = 15/588 (2%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L ++F  A++ AFP++ D    V ST       FGD+Q N AM+L K+ K  G+  NP +
Sbjct: 54   LEELFDSAIKKAFPDIKDFQVVVVSTTPN----FGDYQFNGAMSLSKLLKTLGKSLNPRE 109

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
            +A ++   V           +VI+ +++A PGF+N+ L   +  EQ+  ++  G++PP  
Sbjct: 110  VAAAVQKCVPPN--------EVIETLDLAGPGFINIKLKASFVQEQLSLLVTRGIRPPCG 161

Query: 601  NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 660
             +K RV+VDFSSPNIAKEMHVGHLRSTIIGD+I RLLE+LGHDV+R+NHVGDWGTQFGML
Sbjct: 162  VEKKRVMVDFSSPNIAKEMHVGHLRSTIIGDSICRLLEFLGHDVLRINHVGDWGTQFGML 221

Query: 661  IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
            +AHL+D+FP++  ++PPI DLQ+FYKESK RFD D  FKKRAY CVV LQ  DP Y K W
Sbjct: 222  LAHLEDRFPNFAEETPPIGDLQSFYKESKIRFDSDADFKKRAYACVVKLQSHDPVYIKGW 281

Query: 721  EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 780
            + ICDVSRR+FQKIYDRL++ + ERGESFYQ  M++ V  LE+ G+L+ D+GRK+M+   
Sbjct: 282  QAICDVSRREFQKIYDRLDIKIKERGESFYQDLMKKTVMLLEEAGVLKEDEGRKVMFAPG 341

Query: 781  RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAG 840
              ++P+TIVKSDGG+TYDTSD+AAIRQR+ +E ADW+VYV DLGQ  HF  +  CA+ AG
Sbjct: 342  I-AVPLTIVKSDGGYTYDTSDMAAIRQRVHDEAADWVVYVVDLGQSGHFETIFACAEFAG 400

Query: 841  ILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELT 900
             L+  KTR++ VGFGVVLGEDRKKFK+RS +TV+L +LLDEGLRR+ +KL +K R   LT
Sbjct: 401  WLDRKKTRVEHVGFGVVLGEDRKKFKSRSSETVRLVDLLDEGLRRAKEKLIEKERDKVLT 460

Query: 901  PTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIART 960
            P EL  AQQAVAYGCIKY+DL+HNRN DYVFSFDKML+D+GNTAVYLLYAYTRI SIART
Sbjct: 461  PEELESAQQAVAYGCIKYSDLAHNRNGDYVFSFDKMLEDKGNTAVYLLYAYTRIRSIART 520

Query: 961  AGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTA 1020
            A +  E ++ AA +  + L HEKE  LAK LLR  + ++ +T DLCLH LCE+LY++ST 
Sbjct: 521  ANVTDEQIKKAA-ADGIPLSHEKEMKLAKLLLRFPETIVRLTFDLCLHPLCEFLYEVSTT 579

Query: 1021 FSEFYDNCYCIEKD-AEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            F+EFYD CYC+EKD   G+I  ++  R+ L EATA VM +CF +L ++
Sbjct: 580  FTEFYDVCYCVEKDRTTGQIVHINMDRMALCEATANVMAQCFSLLGLK 627



 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/357 (54%), Positives = 258/357 (72%), Gaps = 15/357 (4%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L ++F  A++ AFP++ D    V ST       FGD+Q N AM+L K+ K  G+  NP +
Sbjct: 54  LEELFDSAIKKAFPDIKDFQVVVVSTTPN----FGDYQFNGAMSLSKLLKTLGKSLNPRE 109

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 210
           +A ++   V           +VI+ +++A PGF+N+ L   +  EQ+  ++  G++PP  
Sbjct: 110 VAAAVQKCVPPN--------EVIETLDLAGPGFINIKLKASFVQEQLSLLVTRGIRPPCG 161

Query: 211 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 270
            +K RV+VDFSSPNIAKEMHVGHLRSTIIGD+I RLLE+LGHDV+R+NHVGDWGTQFGML
Sbjct: 162 VEKKRVMVDFSSPNIAKEMHVGHLRSTIIGDSICRLLEFLGHDVLRINHVGDWGTQFGML 221

Query: 271 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 330
           +AHL+D+FP++  ++PPI DLQ+FYKESK RFD D  FKKRAY CVV LQ  DP Y K W
Sbjct: 222 LAHLEDRFPNFAEETPPIGDLQSFYKESKIRFDSDADFKKRAYACVVKLQSHDPVYIKGW 281

Query: 331 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 390
           + ICDVSRR+FQKIYDRL++ + ERGESFYQ  M++ V  LE+ G+L+ D+GRK+M+   
Sbjct: 282 QAICDVSRREFQKIYDRLDIKIKERGESFYQDLMKKTVMLLEEAGVLKEDEGRKVMFAPG 341

Query: 391 RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIAE 445
             ++P+TIVKSDGG+TYDTSD+AAIRQR+ +E ADW+VYV D     + + + A AE
Sbjct: 342 I-AVPLTIVKSDGGYTYDTSDMAAIRQRVHDEAADWVVYVVDLGQSGHFETIFACAE 397



 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/342 (55%), Positives = 252/342 (73%), Gaps = 13/342 (3%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L ++F  A++ AFP++ D    V ST       FGD+Q N AM+L K+ K  G+  NP +
Sbjct: 54   LEELFDSAIKKAFPDIKDFQVVVVSTTPN----FGDYQFNGAMSLSKLLKTLGKSLNPRE 109

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
            +A ++   V           +VI+ +++A PGF+N+ L   +  EQ+  ++  G++PP  
Sbjct: 110  VAAAVQKCVPPN--------EVIETLDLAGPGFINIKLKASFVQEQLSLLVTRGIRPPCG 161

Query: 1228 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 1287
             +K RV+VDFSSPNIAKEMHVGHLRSTIIGD+I RLLE+LGHDV+R+NHVGDWGTQFGML
Sbjct: 162  VEKKRVMVDFSSPNIAKEMHVGHLRSTIIGDSICRLLEFLGHDVLRINHVGDWGTQFGML 221

Query: 1288 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            +AHL+D+FP++  ++PPI DLQ+FYKESK RFD D  FKKRAY CVV LQ  DP Y K W
Sbjct: 222  LAHLEDRFPNFAEETPPIGDLQSFYKESKIRFDSDADFKKRAYACVVKLQSHDPVYIKGW 281

Query: 1348 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 1407
            + ICDVSRR+FQKIYDRL++ + ERGESFYQ  M++ V  LE+ G+L+ D+GRK+M+   
Sbjct: 282  QAICDVSRREFQKIYDRLDIKIKERGESFYQDLMKKTVMLLEEAGVLKEDEGRKVMFAPG 341

Query: 1408 RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              ++P+TIVKSDGG+TYDTSD+AAIRQR+ +E ADW+VYV D
Sbjct: 342  I-AVPLTIVKSDGGYTYDTSDMAAIRQRVHDEAADWVVYVVD 382


>gi|346716348|ref|NP_001231189.1| arginine--tRNA ligase, cytoplasmic [Sus scrofa]
          Length = 660

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/601 (56%), Positives = 450/601 (74%), Gaps = 13/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPSKNMINIISGLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+N+ L + +  +Q+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKNLPDN----EYIEKVEIAGPGFINIHLKKSFVSQQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
             +++VNGVQ P +    +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+R+
Sbjct: 176  TNLLVNGVQLPAIGANKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRI 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYL  SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLRVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQSKNPDILKAWKLICDVSRQEFSKIYEALDISLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++      +P+TIVKSDGG+TYDTSDLA I+QR+ EEKAD I+YV D GQ +
Sbjct: 356  QVDDGRKIVFVPG-CPVPLTIVKSDGGYTYDTSDLATIKQRLFEEKADMIIYVVDSGQSL 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+
Sbjct: 415  HFQAVFGAAQMMGWYDPEVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  +VL  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEVLQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + G++  V+  RLLL +A A VM K FDIL I
Sbjct: 595  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGEVLKVNMWRLLLCKAVAAVMAKGFDILGI 654

Query: 1067 R 1067
            +
Sbjct: 655  K 655



 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/395 (52%), Positives = 280/395 (70%), Gaps = 32/395 (8%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N KLK+RL ILQ+++  E  K                    P ++ +++   L +VF  
Sbjct: 47  ENLKLKYRLNILQKSLQAERNK--------------------PSKNMINIISGLQEVFGC 86

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +K NP +IA++I  
Sbjct: 87  AIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQMLKTKEQKVNPREIAENI-- 141

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVL 217
             T  L  N    + I+K+E+A PGF+N+ L + +  +Q+ +++VNGVQ P +    +V+
Sbjct: 142 --TKNLPDN----EYIEKVEIAGPGFINIHLKKSFVSQQLTNLLVNGVQLPAIGANKKVI 195

Query: 218 VDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDK 277
           VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+R+NHVGDWGTQFGMLIAHLQDK
Sbjct: 196 VDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRINHVGDWGTQFGMLIAHLQDK 255

Query: 278 FPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           FPDYL  SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +PD  KAW++ICDVS
Sbjct: 256 FPDYLRVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDILKAWKLICDVS 315

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 397
           R++F KIY+ L+++L ERGESFYQ  M  +V   E +G +++DDGRKI++      +P+T
Sbjct: 316 RQEFSKIYEALDISLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVPG-CPVPLT 374

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           IVKSDGG+TYDTSDLA I+QR+ EEKAD I+YV D
Sbjct: 375 IVKSDGGYTYDTSDLATIKQRLFEEKADMIIYVVD 409



 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/355 (55%), Positives = 265/355 (74%), Gaps = 12/355 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPSKNMINIISGLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+N+ L + +  +Q+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKNLPDN----EYIEKVEIAGPGFINIHLKKSFVSQQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
             +++VNGVQ P +    +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+R+
Sbjct: 176  TNLLVNGVQLPAIGANKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRI 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYL  SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLRVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQSKNPDILKAWKLICDVSRQEFSKIYEALDISLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++      +P+TIVKSDGG+TYDTSDLA I+QR+ EEKAD I+YV D
Sbjct: 356  QVDDGRKIVFVPG-CPVPLTIVKSDGGYTYDTSDLATIKQRLFEEKADMIIYVVD 409


>gi|387014662|gb|AFJ49450.1| Arginyl-tRNA synthetase, cytoplasmic-like [Crotalus adamanteus]
          Length = 663

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/589 (57%), Positives = 441/589 (74%), Gaps = 14/589 (2%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF-KDKGEKKNPF 539
            + ++F  A++ A+P+L     +V  + +    +FGD+QCN AM++ ++  K K +K +P 
Sbjct: 82   IQELFKAAIKAAYPDLESPPLAVTPSQQS---RFGDYQCNSAMSISQLLLKTKEQKVSPR 138

Query: 540  DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 599
            DIA  IA  +           + I+K E+A PGF+NV L + +   Q+  +++NGVQPP 
Sbjct: 139  DIADKIARNIPDN--------ECIEKTEIAGPGFINVHLKKDFVSGQLSSMLMNGVQPPA 190

Query: 600  LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
              ++ +V++DFSSPNIAKEMHVGHLRSTIIGD++ RL E++GHDV+RLNH+GDWGTQFGM
Sbjct: 191  AGERKKVVIDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFMGHDVLRLNHLGDWGTQFGM 250

Query: 660  LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 719
            LIAHLQDKFPDYLT SPPI DLQAFYKESK+RFD +E FKK AY CVV LQ   PD  KA
Sbjct: 251  LIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKHAYHCVVLLQSKSPDIIKA 310

Query: 720  WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 779
            W +ICDVSR++FQKIYD L+V++ +RGES+YQ  M  +V  LE+KG++++DDGRKI++  
Sbjct: 311  WNLICDVSRKEFQKIYDCLDVSIIDRGESYYQDRMHGIVKELEEKGVVQVDDGRKIVFVP 370

Query: 780  DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKA 839
               S+P+TIVKSDGGFTYDTSDLAAI+QRI EEKA +++YV D GQ  H + +   A+  
Sbjct: 371  G-CSVPLTIVKSDGGFTYDTSDLAAIKQRIFEEKAHYVIYVVDSGQSTHLQTIFAAAQMI 429

Query: 840  GILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTEL 899
            G  +P  T++    FGVVLGED+KKFKTRSGDTV+L +LL+EGL+RS+DKLK+K R   L
Sbjct: 430  GWYDPKVTKVIHAPFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVL 489

Query: 900  TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR 959
            T  EL  AQ +VA+GCIKYADLSH+R  DY+FSFDKMLDDRGNTA YLLYA+TRI SIAR
Sbjct: 490  TAEELKAAQTSVAFGCIKYADLSHHRINDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIAR 549

Query: 960  TAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIST 1019
             A IN + L+ AA++T + L+HEKE+ L K +LR  +++     DL LH LC+YLY+++T
Sbjct: 550  LANINEDKLQKAARTTKIILDHEKEWKLGKCILRFPEIIQKCLDDLLLHTLCDYLYELAT 609

Query: 1020 AFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
             F+EFYDNCYC+EKD + G+I  V+  R+LL EATA VM K FDIL I+
Sbjct: 610  TFTEFYDNCYCVEKDRQTGEIVNVNMWRMLLCEATAAVMAKGFDILGIK 658



 Score =  425 bits (1092), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/430 (50%), Positives = 298/430 (69%), Gaps = 33/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S T + L  + +N KLK+RL ILQ+++ EE  ++   
Sbjct: 15  QEREIKFLTAEIDHLKNYGCLGASPTLEEL--REENAKLKYRLNILQKSLHEERHRE--- 69

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                  K     +N+  R        + ++F  A++ A+P+L     +V  + +    +
Sbjct: 70  -------KSFKGMININYR--------IQELFKAAIKAAYPDLESPPLAVTPSQQS---R 111

Query: 124 FGDFQCNDAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           FGD+QCN AM++ ++  K K +K +P DIA  IA  +           + I+K E+A PG
Sbjct: 112 FGDYQCNSAMSISQLLLKTKEQKVSPRDIADKIARNIPDN--------ECIEKTEIAGPG 163

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+NV L + +   Q+  +++NGVQPP   ++ +V++DFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 164 FINVHLKKDFVSGQLSSMLMNGVQPPAAGERKKVVIDFSSPNIAKEMHVGHLRSTIIGDS 223

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + RL E++GHDV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESK+RF
Sbjct: 224 MCRLFEFMGHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRF 283

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
           D +E FKK AY CVV LQ   PD  KAW +ICDVSR++FQKIYD L+V++ +RGES+YQ 
Sbjct: 284 DTEEEFKKHAYHCVVLLQSKSPDIIKAWNLICDVSRKEFQKIYDCLDVSIIDRGESYYQD 343

Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
            M  +V  LE+KG++++DDGRKI++     S+P+TIVKSDGGFTYDTSDLAAI+QRI EE
Sbjct: 344 RMHGIVKELEEKGVVQVDDGRKIVFVPG-CSVPLTIVKSDGGFTYDTSDLAAIKQRIFEE 402

Query: 423 KADWIVYVTD 432
           KA +++YV D
Sbjct: 403 KAHYVIYVVD 412



 Score =  408 bits (1049), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 194/343 (56%), Positives = 258/343 (75%), Gaps = 13/343 (3%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF-KDKGEKKNPF 1166
            + ++F  A++ A+P+L     +V  + +    +FGD+QCN AM++ ++  K K +K +P 
Sbjct: 82   IQELFKAAIKAAYPDLESPPLAVTPSQQS---RFGDYQCNSAMSISQLLLKTKEQKVSPR 138

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 1226
            DIA  IA  +           + I+K E+A PGF+NV L + +   Q+  +++NGVQPP 
Sbjct: 139  DIADKIARNIPDN--------ECIEKTEIAGPGFINVHLKKDFVSGQLSSMLMNGVQPPA 190

Query: 1227 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
              ++ +V++DFSSPNIAKEMHVGHLRSTIIGD++ RL E++GHDV+RLNH+GDWGTQFGM
Sbjct: 191  AGERKKVVIDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFMGHDVLRLNHLGDWGTQFGM 250

Query: 1287 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 1346
            LIAHLQDKFPDYLT SPPI DLQAFYKESK+RFD +E FKK AY CVV LQ   PD  KA
Sbjct: 251  LIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKHAYHCVVLLQSKSPDIIKA 310

Query: 1347 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 1406
            W +ICDVSR++FQKIYD L+V++ +RGES+YQ  M  +V  LE+KG++++DDGRKI++  
Sbjct: 311  WNLICDVSRKEFQKIYDCLDVSIIDRGESYYQDRMHGIVKELEEKGVVQVDDGRKIVFVP 370

Query: 1407 DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
               S+P+TIVKSDGGFTYDTSDLAAI+QRI EEKA +++YV D
Sbjct: 371  G-CSVPLTIVKSDGGFTYDTSDLAAIKQRIFEEKAHYVIYVVD 412


>gi|1217668|gb|AAB35627.1| arginyl-tRNA synthetase [Homo sapiens]
          Length = 659

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/601 (57%), Positives = 444/601 (73%), Gaps = 14/601 (2%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K  + NP + A++I    T  L   P++  V+ ++E A PGF+N  L + +  EQ+
Sbjct: 124  MLKTKEPEVNPGEFAENI----TKHL---PAM-DVLKRVEFAGPGFINGHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KA+ ++ DVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAYLLMSDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL EGL+RS+
Sbjct: 415  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSM 474

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 475  DKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 534

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L HEKE+ L + +LR  ++L  +  DL L
Sbjct: 535  LYAFTRIRSIARLANIDEEMLQKAARETKILLVHEKEWKLGRCILRFPEILQKILDDLFL 594

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++TAF+EFYD+CYC+EKD + GKI  V+  R +L E  A VM K FD L I
Sbjct: 595  HTLCDYIYELATAFTEFYDSCYCVEKDRQTGKILKVNMWR-ILCETVAAVMAKGFDTLGI 653

Query: 1067 R 1067
            +
Sbjct: 654  K 654



 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/444 (50%), Positives = 303/444 (68%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S+  + L  Q +N KLK+RL IL++++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLGASSNLEQL--QEENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K  + NP + A++I    T  L   P++  V+ ++E A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEPEVNPGEFAENI----TKHL---PAM-DVLKRVEFAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N  L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INGHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KA+ ++ DVSR++  KIYD L+V+L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAYLLMSDVSRQELNKIYDALDVSLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
           AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424



 Score =  408 bits (1049), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/361 (56%), Positives = 266/361 (73%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K  + NP + A++I    T  L   P++  V+ ++E A PGF+N  L + +  EQ+
Sbjct: 124  MLKTKEPEVNPGEFAENI----TKHL---PAM-DVLKRVEFAGPGFINGHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176  TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KA+ ++ DVSR++  KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQGKNPDITKAYLLMSDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|196006025|ref|XP_002112879.1| hypothetical protein TRIADDRAFT_56467 [Trichoplax adhaerens]
 gi|190584920|gb|EDV24989.1| hypothetical protein TRIADDRAFT_56467 [Trichoplax adhaerens]
          Length = 668

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/635 (53%), Positives = 451/635 (71%), Gaps = 31/635 (4%)

Query: 433  HRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVA 492
            +R YH  L    EEE  Q             +K+  +P     +++  +  +F  A+  A
Sbjct: 58   YRIYHLNLSIKKEEEALQA------------SKRKAMP-----NIQKVVQGIFEQAIVKA 100

Query: 493  FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSE 552
            FP++       +ST E+    FGD+QCN+AM L K+ K+ G+  +P    +S+A  +   
Sbjct: 101  FPDVSISAIVHSSTQER----FGDYQCNNAMILSKVLKENGKSLSP----RSVAEQIIQH 152

Query: 553  LATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSS 612
            L  N     V++K E+A PGF+N+ + + +    + DII+ GV+PP +N+K+RVLVDFSS
Sbjct: 153  LPAN----DVLEKTEIAGPGFINITIKKHFILSLLSDIIMYGVRPPVMNRKMRVLVDFSS 208

Query: 613  PNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL 672
            PN+AKEMHVGHLRSTIIGD+ISRLLE++GHDVVR++H+GDWGTQFGMLIAHL+D FP YL
Sbjct: 209  PNVAKEMHVGHLRSTIIGDSISRLLEFVGHDVVRISHLGDWGTQFGMLIAHLRDTFPKYL 268

Query: 673  TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 732
             +SPPIADLQAFYK +K RFDED +FKKRAY+ VV LQ  + DY KAWEMICDVS+ +F+
Sbjct: 269  NQSPPIADLQAFYKAAKVRFDEDAVFKKRAYEAVVKLQARESDYFKAWEMICDVSKNEFE 328

Query: 733  KIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSD 792
            KIY RL V +  RGESFYQ  M  +V  L+ +GLLELD+GRKI+   +   +P+TIVKSD
Sbjct: 329  KIYQRLGVKVVNRGESFYQDMMIDVVKDLDTRGLLELDEGRKILKVPNI-KVPLTIVKSD 387

Query: 793  GGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFV 852
            GGFTYDTSD+AA+RQR+ +EKADW++Y+TD GQG+HF ++   ++  G +N    R+  V
Sbjct: 388  GGFTYDTSDMAAMRQRVMDEKADWLIYITDGGQGLHFEIIFSASEAVGYVNRKHVRVVHV 447

Query: 853  GFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVA 912
             FGVVLGED+KKFKTRS DTV+L +LLDEG+RR+  KL DK R   L+  EL  A +AVA
Sbjct: 448  PFGVVLGEDKKKFKTRSTDTVRLVDLLDEGIRRAKAKLIDKGRDKVLSKEELEVAAKAVA 507

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
            YGCIKYADLS NR  DY+FSFDKMLDD+GNTAVYLLYA TRI SIAR A ++S +L   A
Sbjct: 508  YGCIKYADLSRNRTGDYIFSFDKMLDDKGNTAVYLLYALTRIRSIARLANVSSSELTKVA 567

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
            +S  +  +H KE+ LAK +LR  ++L  +  DL LH LC+++Y++S  F+EFYD CYCIE
Sbjct: 568  ESASIEFDHPKEWKLAKLILRFPEILEKILDDLLLHPLCDFMYELSCTFTEFYDTCYCIE 627

Query: 1033 KDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            KD + G+I  ++  RL+L EATA +M+K F +L I
Sbjct: 628  KDRKTGEILKINMNRLILCEATAMIMEKSFHLLGI 662



 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/431 (50%), Positives = 301/431 (69%), Gaps = 33/431 (7%)

Query: 3   IKELK-LKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQG 61
           I+ELK L + + K  + S++G  ++    D+   + QN +L++R+  L  +I +EE    
Sbjct: 19  IEELKKLIQQLEKDADPSSQGKATDMIVNDL---KSQNDRLRYRIYHLNLSIKKEE---- 71

Query: 62  ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 121
                  +   A+K+  +P     +++  +  +F  A+  AFP++       +ST E+  
Sbjct: 72  -------EALQASKRKAMP-----NIQKVVQGIFEQAIVKAFPDVSISAIVHSSTQER-- 117

Query: 122 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
             FGD+QCN+AM L K+ K+ G+  +P    +S+A  +   L  N     V++K E+A P
Sbjct: 118 --FGDYQCNNAMILSKVLKENGKSLSP----RSVAEQIIQHLPAN----DVLEKTEIAGP 167

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           GF+N+ + + +    + DII+ GV+PP +N+K+RVLVDFSSPN+AKEMHVGHLRSTIIGD
Sbjct: 168 GFINITIKKHFILSLLSDIIMYGVRPPVMNRKMRVLVDFSSPNVAKEMHVGHLRSTIIGD 227

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISRLLE++GHDVVR++H+GDWGTQFGMLIAHL+D FP YL +SPPIADLQAFYK +K R
Sbjct: 228 SISRLLEFVGHDVVRISHLGDWGTQFGMLIAHLRDTFPKYLNQSPPIADLQAFYKAAKVR 287

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 361
           FDED +FKKRAY+ VV LQ  + DY KAWEMICDVS+ +F+KIY RL V +  RGESFYQ
Sbjct: 288 FDEDAVFKKRAYEAVVKLQARESDYFKAWEMICDVSKNEFEKIYQRLGVKVVNRGESFYQ 347

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 421
             M  +V  L+ +GLLELD+GRKI+   +   +P+TIVKSDGGFTYDTSD+AA+RQR+ +
Sbjct: 348 DMMIDVVKDLDTRGLLELDEGRKILKVPNI-KVPLTIVKSDGGFTYDTSDMAAMRQRVMD 406

Query: 422 EKADWIVYVTD 432
           EKADW++Y+TD
Sbjct: 407 EKADWLIYITD 417



 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/360 (55%), Positives = 267/360 (74%), Gaps = 18/360 (5%)

Query: 1090 AAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDA 1149
            A+K+  +P     +++  +  +F  A+  AFP++       +ST E+    FGD+QCN+A
Sbjct: 76   ASKRKAMP-----NIQKVVQGIFEQAIVKAFPDVSISAIVHSSTQER----FGDYQCNNA 126

Query: 1150 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 1209
            M L K+ K+ G+  +P    +S+A  +   L  N     V++K E+A PGF+N+ + + +
Sbjct: 127  MILSKVLKENGKSLSP----RSVAEQIIQHLPAN----DVLEKTEIAGPGFINITIKKHF 178

Query: 1210 AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 1269
                + DII+ GV+PP +N+K+RVLVDFSSPN+AKEMHVGHLRSTIIGD+ISRLLE++GH
Sbjct: 179  ILSLLSDIIMYGVRPPVMNRKMRVLVDFSSPNVAKEMHVGHLRSTIIGDSISRLLEFVGH 238

Query: 1270 DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 1329
            DVVR++H+GDWGTQFGMLIAHL+D FP YL +SPPIADLQAFYK +K RFDED +FKKRA
Sbjct: 239  DVVRISHLGDWGTQFGMLIAHLRDTFPKYLNQSPPIADLQAFYKAAKVRFDEDAVFKKRA 298

Query: 1330 YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE 1389
            Y+ VV LQ  + DY KAWEMICDVS+ +F+KIY RL V +  RGESFYQ  M  +V  L+
Sbjct: 299  YEAVVKLQARESDYFKAWEMICDVSKNEFEKIYQRLGVKVVNRGESFYQDMMIDVVKDLD 358

Query: 1390 KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             +GLLELD+GRKI+   +   +P+TIVKSDGGFTYDTSD+AA+RQR+ +EKADW++Y+TD
Sbjct: 359  TRGLLELDEGRKILKVPNI-KVPLTIVKSDGGFTYDTSDMAAMRQRVMDEKADWLIYITD 417


>gi|344240202|gb|EGV96305.1| Arginyl-tRNA synthetase, cytoplasmic [Cricetulus griseus]
          Length = 542

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/546 (60%), Positives = 423/546 (77%), Gaps = 10/546 (1%)

Query: 523  MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 582
            M + ++ K K +K NP  IA++I    T  L  N    + ID++E+A PGF+NV L + +
Sbjct: 1    MGISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDF 52

Query: 583  AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 642
              EQ+ +++VNG+Q P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+
Sbjct: 53   VSEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGY 112

Query: 643  DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 702
            DV+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD +E FKKRA
Sbjct: 113  DVLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRA 172

Query: 703  YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE 762
            YQCVV+LQ  DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E
Sbjct: 173  YQCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFE 232

Query: 763  KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
             KG +++DDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA+ I+YV D
Sbjct: 233  DKGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVD 291

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQ VHF+ +   A+  G  +P  T++  VGFGVVLGED+KKFKTRSG+TV+L +LL EG
Sbjct: 292  NGQAVHFQTIFAAAQMIGWYDPKVTQVTHVGFGVVLGEDKKKFKTRSGETVRLVDLLGEG 351

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            L+RS+DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGN
Sbjct: 352  LKRSMDKLKEKERDKVLTEEELTAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGN 411

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA YLLYA+TRI SIAR A ++ E L+ AA+ T + L+HEKE+ L + +LR  ++L  + 
Sbjct: 412  TAAYLLYAFTRIRSIARLANVDEEMLQKAARETKIVLDHEKEWKLGRCILRFPEILQKML 471

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCF 1061
             DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K F
Sbjct: 472  DDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGF 531

Query: 1062 DILNIR 1067
            DIL I+
Sbjct: 532  DILGIK 537



 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/301 (63%), Positives = 238/301 (79%), Gaps = 9/301 (2%)

Query: 133 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 192
           M + ++ K K +K NP  IA++I    T  L  N    + ID++E+A PGF+NV L + +
Sbjct: 1   MGISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDF 52

Query: 193 AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 252
             EQ+ +++VNG+Q P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+
Sbjct: 53  VSEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGY 112

Query: 253 DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 312
           DV+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD +E FKKRA
Sbjct: 113 DVLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRA 172

Query: 313 YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE 372
           YQCVV+LQ  DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E
Sbjct: 173 YQCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFE 232

Query: 373 KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            KG +++DDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA+ I+YV D
Sbjct: 233 DKGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVD 291

Query: 433 H 433
           +
Sbjct: 292 N 292



 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/301 (63%), Positives = 238/301 (79%), Gaps = 9/301 (2%)

Query: 1150 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 1209
            M + ++ K K +K NP  IA++I    T  L  N    + ID++E+A PGF+NV L + +
Sbjct: 1    MGISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDF 52

Query: 1210 AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 1269
              EQ+ +++VNG+Q P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+
Sbjct: 53   VSEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGY 112

Query: 1270 DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 1329
            DV+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD +E FKKRA
Sbjct: 113  DVLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRA 172

Query: 1330 YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE 1389
            YQCVV+LQ  DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E
Sbjct: 173  YQCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFE 232

Query: 1390 KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             KG +++DDGRKI++     SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA+ I+YV D
Sbjct: 233  DKGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVD 291

Query: 1450 H 1450
            +
Sbjct: 292  N 292


>gi|391337504|ref|XP_003743107.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Metaseiulus
            occidentalis]
          Length = 668

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/591 (56%), Positives = 432/591 (73%), Gaps = 18/591 (3%)

Query: 481  LSDVFTHAVQVAFPELGDKT--ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 538
            LS++F+ A   AFPE   +       STNEK    FGD+QCN AM   K FK  G+  + 
Sbjct: 89   LSEIFSKAFNAAFPEASGQVQVGVTPSTNEK----FGDYQCNVAMPATKYFKKVGKNISS 144

Query: 539  FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPP 598
             +IA+ +   +            +I    +A PGF+N+ L+  +  +    I+ NGV PP
Sbjct: 145  VEIAERVVEKLVP--------GSLIGSTSIAGPGFINIKLNLDFVRDATLCILKNGVSPP 196

Query: 599  TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFG 658
             +++KLRV+VDFSSPNIAK+MHVGHLRSTIIG++ISRLLE++GHDV+RLNH+GDWGTQFG
Sbjct: 197  RVDRKLRVVVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFVGHDVLRLNHIGDWGTQFG 256

Query: 659  MLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 718
            MLIAHL DKFPDY    PP+ADLQ FYKESK RFD D  FK RAY+ VV LQ  + D  K
Sbjct: 257  MLIAHLMDKFPDYKENVPPVADLQEFYKESKMRFDSDPAFKSRAYEAVVRLQSKEKDIVK 316

Query: 719  AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWG 778
            AW++ICDVSR++ Q +YDRL++TL ERGESFY + M  +V  L+++GLL L+DGRK+M+ 
Sbjct: 317  AWQLICDVSRKEMQSVYDRLDITLLERGESFYNELMIDVVKDLDRRGLLSLEDGRKVMYP 376

Query: 779  EDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKK 838
            ++   +PMTIVKSDGGFTYDTSD+A+IR R+  EK DW++YV D GQ  HF+ L +CA+ 
Sbjct: 377  QEENLVPMTIVKSDGGFTYDTSDMASIRHRVGVEKGDWLIYVVDSGQSSHFKQLFKCAQI 436

Query: 839  AGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTE 898
            AG ++  KTR+ FVGFG+VLGEDRKK KTRSG+TVKL++LLDEGL+R  +KL  K R  E
Sbjct: 437  AGYVD-EKTRLSFVGFGLVLGEDRKKLKTRSGETVKLNDLLDEGLQRCREKLLAKGRDKE 495

Query: 899  LTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIA 958
            LTP EL  AQ+AVAYGCIK+ADL ++R  DY+ SFD+MLDDRG TA YLLY+ TRI SIA
Sbjct: 496  LTPEELKRAQEAVAYGCIKFADLVNSRTNDYICSFDRMLDDRGKTAAYLLYSLTRIRSIA 555

Query: 959  RTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIS 1018
            R AG+++ +LR +   T + L+H KE  LAK LL+  ++L+ +  DL +H LC+YLYD+S
Sbjct: 556  RQAGVDTAELRKSI--TKLDLDHPKEIKLAKQLLKYPEILLTILEDLYIHPLCDYLYDLS 613

Query: 1019 TAFSEFYDNCYCIEKD-AEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            + FSEFYDNCYCI K+   G+I++V+  RL L EATA+VM+ CF IL IRT
Sbjct: 614  STFSEFYDNCYCIVKNRTTGEIESVNMSRLALCEATAQVMEMCFKILGIRT 664



 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 208/429 (48%), Positives = 281/429 (65%), Gaps = 30/429 (6%)

Query: 7   KLKEFISKVNELSTKGFISES-ATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSS 65
           +L E I++V  L  +G I ES   E++   + +N +L++ +  L+++IA E         
Sbjct: 19  ELDELIAEVASLR-RGEIPESHVPEELTELRSKNAELRYHINFLKKSIAREG-----GEC 72

Query: 66  ISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKT--ASVASTNEKYVHK 123
              Q  G   K  + +         LS++F+ A   AFPE   +       STNEK    
Sbjct: 73  APMQENGNTSKCALTL---------LSEIFSKAFNAAFPEASGQVQVGVTPSTNEK---- 119

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM   K FK  G+  +  +IA+ +   +            +I    +A PGF
Sbjct: 120 FGDYQCNVAMPATKYFKKVGKNISSVEIAERVVEKLVP--------GSLIGSTSIAGPGF 171

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L+  +  +    I+ NGV PP +++KLRV+VDFSSPNIAK+MHVGHLRSTIIG++I
Sbjct: 172 INIKLNLDFVRDATLCILKNGVSPPRVDRKLRVVVDFSSPNIAKQMHVGHLRSTIIGESI 231

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRLLE++GHDV+RLNH+GDWGTQFGMLIAHL DKFPDY    PP+ADLQ FYKESK RFD
Sbjct: 232 SRLLEFVGHDVLRLNHIGDWGTQFGMLIAHLMDKFPDYKENVPPVADLQEFYKESKMRFD 291

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            D  FK RAY+ VV LQ  + D  KAW++ICDVSR++ Q +YDRL++TL ERGESFY + 
Sbjct: 292 SDPAFKSRAYEAVVRLQSKEKDIVKAWQLICDVSRKEMQSVYDRLDITLLERGESFYNEL 351

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V  L+++GLL L+DGRK+M+ ++   +PMTIVKSDGGFTYDTSD+A+IR R+  EK
Sbjct: 352 MIDVVKDLDRRGLLSLEDGRKVMYPQEENLVPMTIVKSDGGFTYDTSDMASIRHRVGVEK 411

Query: 424 ADWIVYVTD 432
            DW++YV D
Sbjct: 412 GDWLIYVVD 420



 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/344 (54%), Positives = 245/344 (71%), Gaps = 14/344 (4%)

Query: 1108 LSDVFTHAVQVAFPELGDKT--ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 1165
            LS++F+ A   AFPE   +       STNEK    FGD+QCN AM   K FK  G+  + 
Sbjct: 89   LSEIFSKAFNAAFPEASGQVQVGVTPSTNEK----FGDYQCNVAMPATKYFKKVGKNISS 144

Query: 1166 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPP 1225
             +IA+ +   +            +I    +A PGF+N+ L+  +  +    I+ NGV PP
Sbjct: 145  VEIAERVVEKLVP--------GSLIGSTSIAGPGFINIKLNLDFVRDATLCILKNGVSPP 196

Query: 1226 TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFG 1285
             +++KLRV+VDFSSPNIAK+MHVGHLRSTIIG++ISRLLE++GHDV+RLNH+GDWGTQFG
Sbjct: 197  RVDRKLRVVVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFVGHDVLRLNHIGDWGTQFG 256

Query: 1286 MLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 1345
            MLIAHL DKFPDY    PP+ADLQ FYKESK RFD D  FK RAY+ VV LQ  + D  K
Sbjct: 257  MLIAHLMDKFPDYKENVPPVADLQEFYKESKMRFDSDPAFKSRAYEAVVRLQSKEKDIVK 316

Query: 1346 AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWG 1405
            AW++ICDVSR++ Q +YDRL++TL ERGESFY + M  +V  L+++GLL L+DGRK+M+ 
Sbjct: 317  AWQLICDVSRKEMQSVYDRLDITLLERGESFYNELMIDVVKDLDRRGLLSLEDGRKVMYP 376

Query: 1406 EDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++   +PMTIVKSDGGFTYDTSD+A+IR R+  EK DW++YV D
Sbjct: 377  QEENLVPMTIVKSDGGFTYDTSDMASIRHRVGVEKGDWLIYVVD 420


>gi|47221361|emb|CAF97279.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 697

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/630 (54%), Positives = 445/630 (70%), Gaps = 50/630 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +++   L +VF  A++ +FPEL +   ++A   +    KFGD+QCN AMA+ ++ K KG 
Sbjct: 74   VNINQRLQEVFGLAIRTSFPELENPPLALAPNQQP---KFGDYQCNSAMAMAQMLKAKGV 130

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K NP +IA+ I    T  L  N    ++I K E+A PGF+N+ L R +  + +  +++NG
Sbjct: 131  KVNPREIAERI----TRNLPDN----ELIQKTEIAGPGFINIHLKRSFVSKLLSKLLING 182

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            V+PP L  + RV+VDFSSPNIAKEMHVGHLRSTIIGD++SRL E+LGHDV+RLNHVGDWG
Sbjct: 183  VKPPPLASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVGDWG 242

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFDEDE FKKRAYQCVV LQ  +P
Sbjct: 243  TQFGMLIAHLQDKFPDYLTASPPIGDLQAFYKESKKRFDEDEAFKKRAYQCVVKLQSKEP 302

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            D+ KAW +ICDVSR++FQKIYD L++ + ERGES+YQ  M  +V   E +G ++LD+GRK
Sbjct: 303  DFIKAWNLICDVSRQEFQKIYDCLDIKIIERGESYYQDLMTDVVKEAEDRGFVQLDEGRK 362

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            I++   + S+P+T+VKSDGG+TYDTSDLAA+RQR+ EEKAD I+YVTD GQG HF+++  
Sbjct: 363  IIFAPGQ-SLPLTVVKSDGGYTYDTSDLAALRQRLFEEKADTIIYVTDSGQGSHFQVVFA 421

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGED--------------------------------- 861
             A+  G  +P  TR++  GFGVVLGED                                 
Sbjct: 422  AAQMLGWYDPKVTRVEHAGFGVVLGEDKRLQRSRNRIRHRYPAPTSVLGLRAADVSSALP 481

Query: 862  ---RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
               RKKFKTRSG+TV+L +LLDEGL+RS+DKLK+K R   LT  EL +AQ+AVA    + 
Sbjct: 482  NLPRKKFKTRSGETVRLMDLLDEGLKRSMDKLKEKERDQVLTADELVKAQRAVALRLHQV 541

Query: 919  ADLSHNRNL-DYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
                   +L  YVFSFDKMLDDRGNTA YLLYA+TRI SIAR A I+   LR  A ST +
Sbjct: 542  RRPFPQPHLTTYVFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANIDEATLRKEAASTEI 601

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE- 1036
             LEHEKE+ L K +LR  ++L+ +  DL LH LC+YLY+++T F+EFYD+CYC+EKD + 
Sbjct: 602  LLEHEKEWKLGKCILRFPEILVKILDDLLLHSLCDYLYELATTFTEFYDSCYCVEKDRQT 661

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            G++  V+  R+LL +ATA +M +CF IL +
Sbjct: 662  GEVVKVNMWRMLLCDATAAIMAQCFHILGL 691



 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/444 (52%), Positives = 309/444 (69%), Gaps = 36/444 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +EL+++   +++  L      S SA  + L  +  N++LK+R  IL RA+ EE  + G +
Sbjct: 15  QELQIQALSAEIESLKNSQNASSSAELEALMEE--NSRLKYRFNILNRALQEERTRCGHA 72

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                                +++   L +VF  A++ +FPEL +   ++A   +    K
Sbjct: 73  M--------------------VNINQRLQEVFGLAIRTSFPELENPPLALAPNQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AMA+ ++ K KG K NP +IA+ I    T  L  N    ++I K E+A PGF
Sbjct: 110 FGDYQCNSAMAMAQMLKAKGVKVNPREIAERI----TRNLPDN----ELIQKTEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L R +  + +  +++NGV+PP L  + RV+VDFSSPNIAKEMHVGHLRSTIIGD++
Sbjct: 162 INIHLKRSFVSKLLSKLLINGVKPPPLASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+LGHDV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFLGHDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTASPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
           EDE FKKRAYQCVV LQ  +PD+ KAW +ICDVSR++FQKIYD L++ + ERGES+YQ  
Sbjct: 282 EDEAFKKRAYQCVVKLQSKEPDFIKAWNLICDVSRQEFQKIYDCLDIKIIERGESYYQDL 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G ++LD+GRKI++   + S+P+T+VKSDGG+TYDTSDLAA+RQR+ EEK
Sbjct: 342 MTDVVKEAEDRGFVQLDEGRKIIFAPGQ-SLPLTVVKSDGGYTYDTSDLAALRQRLFEEK 400

Query: 424 ADWIVYVTD--HRSYHQVLQAIAE 445
           AD I+YVTD    S+ QV+ A A+
Sbjct: 401 ADTIIYVTDSGQGSHFQVVFAAAQ 424



 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/358 (59%), Positives = 273/358 (76%), Gaps = 14/358 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +++   L +VF  A++ +FPEL +   ++A   +    KFGD+QCN AMA+ ++ K KG 
Sbjct: 74   VNINQRLQEVFGLAIRTSFPELENPPLALAPNQQP---KFGDYQCNSAMAMAQMLKAKGV 130

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K NP +IA+ I    T  L  N    ++I K E+A PGF+N+ L R +  + +  +++NG
Sbjct: 131  KVNPREIAERI----TRNLPDN----ELIQKTEIAGPGFINIHLKRSFVSKLLSKLLING 182

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            V+PP L  + RV+VDFSSPNIAKEMHVGHLRSTIIGD++SRL E+LGHDV+RLNHVGDWG
Sbjct: 183  VKPPPLASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVGDWG 242

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFDEDE FKKRAYQCVV LQ  +P
Sbjct: 243  TQFGMLIAHLQDKFPDYLTASPPIGDLQAFYKESKKRFDEDEAFKKRAYQCVVKLQSKEP 302

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D+ KAW +ICDVSR++FQKIYD L++ + ERGES+YQ  M  +V   E +G ++LD+GRK
Sbjct: 303  DFIKAWNLICDVSRQEFQKIYDCLDIKIIERGESYYQDLMTDVVKEAEDRGFVQLDEGRK 362

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVL 1457
            I++   + S+P+T+VKSDGG+TYDTSDLAA+RQR+ EEKAD I+YVTD    S+ QV+
Sbjct: 363  IIFAPGQ-SLPLTVVKSDGGYTYDTSDLAALRQRLFEEKADTIIYVTDSGQGSHFQVV 419


>gi|449267240|gb|EMC78206.1| Arginyl-tRNA synthetase, cytoplasmic, partial [Columba livia]
          Length = 613

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/564 (56%), Positives = 426/564 (75%), Gaps = 13/564 (2%)

Query: 472  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF-K 530
            +  +++   L ++F  A+Q A+P+L +    V  + +    KFGD+QCN AM + +I  K
Sbjct: 57   KSMININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQP---KFGDYQCNSAMGITQILLK 113

Query: 531  DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 590
             K +K +P +IA+ IA  + +         + I ++++A PGF+NV L + +  +Q++ +
Sbjct: 114  TKEQKVSPREIAEKIAKNIPAN--------EYIAQVDIAGPGFINVHLRKDFVSKQLRSL 165

Query: 591  IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
            ++NGVQPP L K+ +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH+
Sbjct: 166  LINGVQPPALGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMGRLFEFAGYDVLRLNHL 225

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ
Sbjct: 226  GDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQ 285

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              +PD+ KAW++ICDVSR++FQKIY+ L++TL ERGESFY + M+ +V   E KG +++D
Sbjct: 286  SKNPDFIKAWQLICDVSRKEFQKIYNCLDITLIERGESFYHEMMKDIVKEFEDKGFVQVD 345

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
             GRKI++     S+P+TI KSDGG+TYDTSDLAA+R R+ EEKAD ++YV D GQ VH +
Sbjct: 346  GGRKIVFVPGF-SVPLTITKSDGGYTYDTSDLAALRHRLCEEKADILIYVVDSGQSVHLQ 404

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
             +    +  G  +P  TR+    FGVVLGED+KKFKTRSGDTV+L +LL+EGL+R++DKL
Sbjct: 405  TVFAAGQMIGWYDPKVTRVAHAAFGVVLGEDKKKFKTRSGDTVRLLDLLEEGLKRAMDKL 464

Query: 891  KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            KDK R   LTP EL  AQ ++A+GCIKYADLSHNR  DYVFSFDKMLDDRGNTA YLLYA
Sbjct: 465  KDKERDKVLTPEELKAAQTSIAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLYA 524

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            +TRI +IAR A ++ + LR AA+   ++L+HEKE+ L K +LR  ++L  +  DL LH L
Sbjct: 525  FTRIRAIARLASVDEQMLRKAAREEVLTLDHEKEWKLGKCILRFPEILQKILEDLLLHTL 584

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKD 1034
            C+YLY+++T F+EFYDNCYC+EKD
Sbjct: 585  CDYLYELATTFTEFYDNCYCVEKD 608



 Score =  425 bits (1092), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/430 (50%), Positives = 298/430 (69%), Gaps = 35/430 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   +++  L   G +  S + + L  +  N KLK+RL  LQ+++ EE  K    
Sbjct: 1   QEDEIKLLTAEIEHLKNFGCLGVSPSLEGLREE--NAKLKYRLNFLQKSLQEERSKM--- 55

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                     AK M       +++   L ++F  A+Q A+P+L +    V  + +    K
Sbjct: 56  ----------AKSM-------ININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQP---K 95

Query: 124 FGDFQCNDAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           FGD+QCN AM + +I  K K +K +P +IA+ IA  + +         + I ++++A PG
Sbjct: 96  FGDYQCNSAMGITQILLKTKEQKVSPREIAEKIAKNIPAN--------EYIAQVDIAGPG 147

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+NV L + +  +Q++ +++NGVQPP L K+ +V+VDFSSPNIAKEMHVGHLRSTIIG++
Sbjct: 148 FINVHLRKDFVSKQLRSLLINGVQPPALGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGES 207

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + RL E+ G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRF
Sbjct: 208 MGRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRF 267

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
           D +E FKKRAYQCVV LQ  +PD+ KAW++ICDVSR++FQKIY+ L++TL ERGESFY +
Sbjct: 268 DTEEEFKKRAYQCVVLLQSKNPDFIKAWQLICDVSRKEFQKIYNCLDITLIERGESFYHE 327

Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
            M+ +V   E KG +++D GRKI++     S+P+TI KSDGG+TYDTSDLAA+R R+ EE
Sbjct: 328 MMKDIVKEFEDKGFVQVDGGRKIVFVPGF-SVPLTITKSDGGYTYDTSDLAALRHRLCEE 386

Query: 423 KADWIVYVTD 432
           KAD ++YV D
Sbjct: 387 KADILIYVVD 396



 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/372 (53%), Positives = 271/372 (72%), Gaps = 20/372 (5%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
            +  S+  +    AK M       +++   L ++F  A+Q A+P+L +    V  + +   
Sbjct: 44   LQKSLQEERSKMAKSM-------ININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQP-- 94

Query: 1139 HKFGDFQCNDAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 1197
             KFGD+QCN AM + +I  K K +K +P +IA+ IA  + +         + I ++++A 
Sbjct: 95   -KFGDYQCNSAMGITQILLKTKEQKVSPREIAEKIAKNIPAN--------EYIAQVDIAG 145

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            PGF+NV L + +  +Q++ +++NGVQPP L K+ +V+VDFSSPNIAKEMHVGHLRSTIIG
Sbjct: 146  PGFINVHLRKDFVSKQLRSLLINGVQPPALGKRKKVVVDFSSPNIAKEMHVGHLRSTIIG 205

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            +++ RL E+ G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKK
Sbjct: 206  ESMGRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKK 265

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
            RFD +E FKKRAYQCVV LQ  +PD+ KAW++ICDVSR++FQKIY+ L++TL ERGESFY
Sbjct: 266  RFDTEEEFKKRAYQCVVLLQSKNPDFIKAWQLICDVSRKEFQKIYNCLDITLIERGESFY 325

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 1437
             + M+ +V   E KG +++D GRKI++     S+P+TI KSDGG+TYDTSDLAA+R R+ 
Sbjct: 326  HEMMKDIVKEFEDKGFVQVDGGRKIVFVPGF-SVPLTITKSDGGYTYDTSDLAALRHRLC 384

Query: 1438 EEKADWIVYVTD 1449
            EEKAD ++YV D
Sbjct: 385  EEKADILIYVVD 396


>gi|170584080|ref|XP_001896849.1| arginyl aa-tRNA synthetase protein 1, isoform b [Brugia malayi]
 gi|158595812|gb|EDP34311.1| arginyl aa-tRNA synthetase protein 1, isoform b, putative [Brugia
            malayi]
          Length = 732

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/632 (52%), Positives = 445/632 (70%), Gaps = 20/632 (3%)

Query: 448  KKQGISSSSSSQTKGTAKKMN-VPVRD-RMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 505
            K  G  S+   +    +KK N V V+D   S+   L  +F  +V   +PE+ D    +  
Sbjct: 108  KNDGDKSAGDKRPSKESKKYNYVIVKDFGSSLLCMLRAIFLESVSKLYPEMSDIPILITE 167

Query: 506  TNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDK 565
            T +    KFGD+Q N +M++ +     G+K +P    Q +A  +   L     + K I  
Sbjct: 168  TQQ---IKFGDYQFNSSMSIAQKLLRNGQKISP----QEVARKILDNLPECDRIEKAIKL 220

Query: 566  I-EVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHL 624
            I EV+ PG++N+FL+R +    I +I + G++ P + K+ RVLVDFSSPNIAK+MHVGHL
Sbjct: 221  IMEVSGPGYINIFLNRSWIATSITNIALKGIEVPVIEKR-RVLVDFSSPNIAKQMHVGHL 279

Query: 625  RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAF 684
            RSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGMLIAHLQD FP+++ + PPI+DLQAF
Sbjct: 280  RSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHLQDCFPNFINEVPPISDLQAF 339

Query: 685  YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 744
            YKESKKRFDEDE FK RAYQCV  LQ FDPD+ KAW+MICDVSR+DF +IYDRL++ + E
Sbjct: 340  YKESKKRFDEDEAFKARAYQCVTKLQSFDPDFLKAWQMICDVSRKDFSQIYDRLDINIVE 399

Query: 745  RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            RGESFYQKHM +LV  L+K G+LELD+GRKI+   +   +P+T+VKSDGGFTYDTSDLAA
Sbjct: 400  RGESFYQKHMVELVEELDKLGVLELDEGRKILKLSE--GVPLTVVKSDGGFTYDTSDLAA 457

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            ++ R+  +KADWI+YV D GQ +HF LL    +K G  +P++ R++ V FG+VLGED+KK
Sbjct: 458  LKYRLFVDKADWIIYVVDAGQSLHFELLYAAGQKLGWYSPSEKRVELVSFGLVLGEDKKK 517

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGD+V+L++LLDEG++R+  KL++K R   + P EL+ A+ AVAYGC+KYADLS  
Sbjct: 518  FKTRSGDSVRLTDLLDEGVKRAEAKLQEKERDKVMIPEELALARDAVAYGCVKYADLSQT 577

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP---VSLEH 981
            R  DYVFSFD+MLDDRGNTAVYLLYA+ RI SI R +G++ ED+    QS P   + LEH
Sbjct: 578  RTQDYVFSFDRMLDDRGNTAVYLLYAFARIQSICRNSGVSEEDIHNYLQSLPNGLLPLEH 637

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK--- 1038
            + EF LAKT+L+  D ++    +  LH LC+Y+Y ++T F +FY+ CY I+KD +G    
Sbjct: 638  KSEFRLAKTILKFTDCILNTLDNFLLHQLCDYVYSLATTFHDFYNECYVIQKDTDGMYFA 697

Query: 1039 -IKTVHTGRLLLAEATAKVMKKCFDILNIRTA 1069
             I      RL+L + TA +M  CF IL ++T 
Sbjct: 698  LISLAINTRLVLCKVTAAIMADCFKILGLKTV 729



 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/428 (51%), Positives = 292/428 (68%), Gaps = 40/428 (9%)

Query: 35  AQLQNTKLKHRLAILQRAIAEEEK---KQGISSS-------------ISSQTKG------ 72
           A ++N KLK+R+ ILQ +I ++E+   + GI +S             IS +  G      
Sbjct: 58  AIMENAKLKYRMKILQASIRKQEQLNEENGIKNSSAEVPVEKKSKTKISLKNDGDKSAGD 117

Query: 73  -----AAKKMN-VPVRD-RMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFG 125
                 +KK N V V+D   S+   L  +F  +V   +PE+ D    +  T +    KFG
Sbjct: 118 KRPSKESKKYNYVIVKDFGSSLLCMLRAIFLESVSKLYPEMSDIPILITETQQ---IKFG 174

Query: 126 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKI-EVAKPGFV 184
           D+Q N +M++ +     G+K +P    Q +A  +   L     + K I  I EV+ PG++
Sbjct: 175 DYQFNSSMSIAQKLLRNGQKISP----QEVARKILDNLPECDRIEKAIKLIMEVSGPGYI 230

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N+FL+R +    I +I + G++ P + K+ RVLVDFSSPNIAK+MHVGHLRSTIIGD+IS
Sbjct: 231 NIFLNRSWIATSITNIALKGIEVPVIEKR-RVLVDFSSPNIAKQMHVGHLRSTIIGDSIS 289

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           RLL Y+G DV+RLNH+GDWGTQFGMLIAHLQD FP+++ + PPI+DLQAFYKESKKRFDE
Sbjct: 290 RLLTYVGFDVLRLNHIGDWGTQFGMLIAHLQDCFPNFINEVPPISDLQAFYKESKKRFDE 349

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 364
           DE FK RAYQCV  LQ FDPD+ KAW+MICDVSR+DF +IYDRL++ + ERGESFYQKHM
Sbjct: 350 DEAFKARAYQCVTKLQSFDPDFLKAWQMICDVSRKDFSQIYDRLDINIVERGESFYQKHM 409

Query: 365 EQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKA 424
            +LV  L+K G+LELD+GRKI+   +   +P+T+VKSDGGFTYDTSDLAA++ R+  +KA
Sbjct: 410 VELVEELDKLGVLELDEGRKILKLSE--GVPLTVVKSDGGFTYDTSDLAALKYRLFVDKA 467

Query: 425 DWIVYVTD 432
           DWI+YV D
Sbjct: 468 DWIIYVVD 475



 Score =  408 bits (1049), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/378 (54%), Positives = 269/378 (71%), Gaps = 13/378 (3%)

Query: 1075 KKQGISSSISSQTKGAAKKMN-VPVRD-RMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 1132
            K  G  S+   +    +KK N V V+D   S+   L  +F  +V   +PE+ D    +  
Sbjct: 108  KNDGDKSAGDKRPSKESKKYNYVIVKDFGSSLLCMLRAIFLESVSKLYPEMSDIPILITE 167

Query: 1133 TNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDK 1192
            T +    KFGD+Q N +M++ +     G+K +P    Q +A  +   L     + K I  
Sbjct: 168  TQQ---IKFGDYQFNSSMSIAQKLLRNGQKISP----QEVARKILDNLPECDRIEKAIKL 220

Query: 1193 I-EVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHL 1251
            I EV+ PG++N+FL+R +    I +I + G++ P + K+ RVLVDFSSPNIAK+MHVGHL
Sbjct: 221  IMEVSGPGYINIFLNRSWIATSITNIALKGIEVPVIEKR-RVLVDFSSPNIAKQMHVGHL 279

Query: 1252 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAF 1311
            RSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGMLIAHLQD FP+++ + PPI+DLQAF
Sbjct: 280  RSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHLQDCFPNFINEVPPISDLQAF 339

Query: 1312 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 1371
            YKESKKRFDEDE FK RAYQCV  LQ FDPD+ KAW+MICDVSR+DF +IYDRL++ + E
Sbjct: 340  YKESKKRFDEDEAFKARAYQCVTKLQSFDPDFLKAWQMICDVSRKDFSQIYDRLDINIVE 399

Query: 1372 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            RGESFYQKHM +LV  L+K G+LELD+GRKI+   +   +P+T+VKSDGGFTYDTSDLAA
Sbjct: 400  RGESFYQKHMVELVEELDKLGVLELDEGRKILKLSE--GVPLTVVKSDGGFTYDTSDLAA 457

Query: 1432 IRQRIEEEKADWIVYVTD 1449
            ++ R+  +KADWI+YV D
Sbjct: 458  LKYRLFVDKADWIIYVVD 475


>gi|307168598|gb|EFN61656.1| Arginyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 642

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/631 (55%), Positives = 442/631 (70%), Gaps = 61/631 (9%)

Query: 439  VLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGD 498
            +L    E E+ +  + S++SQ+            + +S+ D L ++F  A+  A+P++ +
Sbjct: 66   ILTRTIEAERNKASAMSNTSQS------------NIISINDTLCEIFRKAITAAYPDVLN 113

Query: 499  KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 558
                V ++N     KFGD+QCN AM L +     G K  P +IA +I     S+L  +P 
Sbjct: 114  PPVIVTTSNNP---KFGDYQCNSAMPLAQQLSSSGNKVIPRNIANNI----MSKLEESP- 165

Query: 559  LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAK 617
               ++DK E+A  GF+N++L R +    + + +  G V PP + KK RV+VDFSSPNIAK
Sbjct: 166  ---LVDKYEIAGAGFINIYLKRDFGQLVLSNWLKIGEVLPPYVKKK-RVIVDFSSPNIAK 221

Query: 618  EMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP 677
            EMHVGHLRSTIIGD+ISRLLEYLGHDV+RLNH+GDWGTQFGMLIAHLQDKFP+Y T +P 
Sbjct: 222  EMHVGHLRSTIIGDSISRLLEYLGHDVLRLNHIGDWGTQFGMLIAHLQDKFPNYSTVTPA 281

Query: 678  IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDR 737
            I DLQAFYKESK RFD DE FKKRAY+CVV LQ F+P+  K W+MICDVSR++F+K+Y R
Sbjct: 282  IQDLQAFYKESKIRFDSDEEFKKRAYECVVKLQAFEPNITKGWKMICDVSRKEFEKLYTR 341

Query: 738  LNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG-SIPMTIVKSDGGFT 796
            L++ L ERGESFYQK ME +V  LE K LLE D+GRK+MWGE  G  IP+ IVKSDGGFT
Sbjct: 342  LDIKLIERGESFYQKRMELIVKELESKNLLEEDNGRKVMWGEKHGVGIPLIIVKSDGGFT 401

Query: 797  YDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGV 856
            YDTSD+AAI+QRIEEE+ADW     + GQ +HF++LE CAKKAGIL  +  R+  VGFGV
Sbjct: 402  YDTSDMAAIKQRIEEERADW----ANAGQSLHFQMLESCAKKAGILK-SFHRVHHVGFGV 456

Query: 857  VLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCI 916
            VLGED+KKFKTRSG+TVKL ELLDEGL+R+L KLK+K R   L+  EL  AQ++VAYGCI
Sbjct: 457  VLGEDKKKFKTRSGETVKLIELLDEGLKRTLQKLKEKERDKVLSEEELKAAQESVAYGCI 516

Query: 917  KYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP 976
            KYADL HNRN +YVFSFDKML+D+GNTAVY+LYA TRI SIAR A I  ++LR  A+  P
Sbjct: 517  KYADLLHNRNHEYVFSFDKMLEDKGNTAVYILYALTRIRSIARMAKITQDELRKHARDIP 576

Query: 977  VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE 1036
            +SLEHEKE+ LAK LL+  D+L+                               I+K+  
Sbjct: 577  ISLEHEKEWKLAKVLLKFPDLLL------------------------------DIKKNQA 606

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            G+I  VH GRLLL EATA V++KCF +L ++
Sbjct: 607  GEIVKVHIGRLLLTEATAMVLEKCFTLLGLK 637



 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/423 (55%), Positives = 296/423 (69%), Gaps = 34/423 (8%)

Query: 36  QLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVF 95
           Q +N KLKHR+AIL R I E E+ +  + S +SQ+            + +S+ D L ++F
Sbjct: 54  QQENIKLKHRIAILTRTI-EAERNKASAMSNTSQS------------NIISINDTLCEIF 100

Query: 96  THAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI 155
             A+  A+P++ +    V ++N     KFGD+QCN AM L +     G K  P +IA +I
Sbjct: 101 RKAITAAYPDVLNPPVIVTTSNNP---KFGDYQCNSAMPLAQQLSSSGNKVIPRNIANNI 157

Query: 156 ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKL 214
                S+L  +P    ++DK E+A  GF+N++L R +    + + +  G V PP + KK 
Sbjct: 158 ----MSKLEESP----LVDKYEIAGAGFINIYLKRDFGQLVLSNWLKIGEVLPPYVKKK- 208

Query: 215 RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL 274
           RV+VDFSSPNIAKEMHVGHLRSTIIGD+ISRLLEYLGHDV+RLNH+GDWGTQFGMLIAHL
Sbjct: 209 RVIVDFSSPNIAKEMHVGHLRSTIIGDSISRLLEYLGHDVLRLNHIGDWGTQFGMLIAHL 268

Query: 275 QDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 334
           QDKFP+Y T +P I DLQAFYKESK RFD DE FKKRAY+CVV LQ F+P+  K W+MIC
Sbjct: 269 QDKFPNYSTVTPAIQDLQAFYKESKIRFDSDEEFKKRAYECVVKLQAFEPNITKGWKMIC 328

Query: 335 DVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG-S 393
           DVSR++F+K+Y RL++ L ERGESFYQK ME +V  LE K LLE D+GRK+MWGE  G  
Sbjct: 329 DVSRKEFEKLYTRLDIKLIERGESFYQKRMELIVKELESKNLLEEDNGRKVMWGEKHGVG 388

Query: 394 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYH-QVLQAIAEEEKKQGI 452
           IP+ IVKSDGGFTYDTSD+AAI+QRIEEE+ADW       +S H Q+L++ A   KK GI
Sbjct: 389 IPLIIVKSDGGFTYDTSDMAAIKQRIEEERADW---ANAGQSLHFQMLESCA---KKAGI 442

Query: 453 SSS 455
             S
Sbjct: 443 LKS 445



 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/367 (56%), Positives = 267/367 (72%), Gaps = 14/367 (3%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
            ++ +I ++   A+   N    + +S+ D L ++F  A+  A+P++ +    V ++N    
Sbjct: 67   LTRTIEAERNKASAMSNTSQSNIISINDTLCEIFRKAITAAYPDVLNPPVIVTTSNNP-- 124

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             KFGD+QCN AM L +     G K  P +IA +I     S+L  +P    ++DK E+A  
Sbjct: 125  -KFGDYQCNSAMPLAQQLSSSGNKVIPRNIANNI----MSKLEESP----LVDKYEIAGA 175

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            GF+N++L R +    + + +  G V PP + KK RV+VDFSSPNIAKEMHVGHLRSTIIG
Sbjct: 176  GFINIYLKRDFGQLVLSNWLKIGEVLPPYVKKK-RVIVDFSSPNIAKEMHVGHLRSTIIG 234

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+ISRLLEYLGHDV+RLNH+GDWGTQFGMLIAHLQDKFP+Y T +P I DLQAFYKESK 
Sbjct: 235  DSISRLLEYLGHDVLRLNHIGDWGTQFGMLIAHLQDKFPNYSTVTPAIQDLQAFYKESKI 294

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
            RFD DE FKKRAY+CVV LQ F+P+  K W+MICDVSR++F+K+Y RL++ L ERGESFY
Sbjct: 295  RFDSDEEFKKRAYECVVKLQAFEPNITKGWKMICDVSRKEFEKLYTRLDIKLIERGESFY 354

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG-SIPMTIVKSDGGFTYDTSDLAAIRQRI 1436
            QK ME +V  LE K LLE D+GRK+MWGE  G  IP+ IVKSDGGFTYDTSD+AAI+QRI
Sbjct: 355  QKRMELIVKELESKNLLEEDNGRKVMWGEKHGVGIPLIIVKSDGGFTYDTSDMAAIKQRI 414

Query: 1437 EEEKADW 1443
            EEE+ADW
Sbjct: 415  EEERADW 421


>gi|72091995|ref|XP_781259.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like
            [Strongylocentrotus purpuratus]
          Length = 665

 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/588 (55%), Positives = 429/588 (72%), Gaps = 14/588 (2%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L+++F  A++VA+P L +   +V  +    V KFGD+QCN AM + +  K +G   +P  
Sbjct: 84   LTEIFRTALRVAYPALTNAPVAVQPSQ---VEKFGDYQCNSAMIIAQQLKAQGSPVSPRV 140

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
            +AQ I + + S          VI+K+++A PGF+N+ L + +    +  I+  GV PP L
Sbjct: 141  VAQQIQANIPSN--------DVIEKVDIAGPGFINIHLKKSFITPLVTGILTQGVLPPPL 192

Query: 601  NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 660
            +KK +V++D SSPNIAKEMH+GHLRSTIIG++ISRL+E++GHDV+++NH+GDWGTQFGML
Sbjct: 193  SKKRKVVIDMSSPNIAKEMHIGHLRSTIIGESISRLMEFVGHDVLKVNHLGDWGTQFGML 252

Query: 661  IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
            I HL D+FP+YL +SPPI DLQ FYKESK RFD DE FKKRAY+ VV LQ  +P   KAW
Sbjct: 253  ITHLADQFPNYLNESPPIQDLQKFYKESKVRFDGDEEFKKRAYKMVVRLQGGEPSIIKAW 312

Query: 721  EMICDVSRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 779
            E+ICD+S+ +F KIY RL+V  L  RGESFYQ+ M  +V  LE  G LE DDGRKIM+  
Sbjct: 313  ELICDISKTEFNKIYARLDVKNLIPRGESFYQERMNVVVQKLEAGGHLEFDDGRKIMFTP 372

Query: 780  DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKA 839
            D  ++P+TIVKSDGG+TYDTSD+A + QR+ E+K + ++YV D GQ  HF  +    +K 
Sbjct: 373  D-SAVPLTIVKSDGGYTYDTSDMATLYQRVHEDKGERLIYVVDAGQATHFDAIFSGCRKL 431

Query: 840  GILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTEL 899
            G  +PN  R++ V FGVVLGED+KKFKTRSGD VKL  LLDEGLRRSL+ LK+K R   L
Sbjct: 432  GWYDPNNVRIEHVSFGVVLGEDKKKFKTRSGDVVKLVSLLDEGLRRSLETLKEKGRDKVL 491

Query: 900  TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR 959
            T  EL  AQ++VAYGCIKYADLSH R  DY+FSFDKML+D+GNTAVYLLYAYTRI SI+R
Sbjct: 492  TAEELKAAQESVAYGCIKYADLSHRRTNDYIFSFDKMLEDKGNTAVYLLYAYTRIRSISR 551

Query: 960  TAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIST 1019
             A + +E L+ AA++T + +EH KE+ LAK L R  +V+     DL +H +C+YLY+++ 
Sbjct: 552  KAEVLAETLKEAAKTTSIPVEHPKEWKLAKCLARFPEVISRTLDDLFIHGICDYLYEVAN 611

Query: 1020 AFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             F+EFY+ CYCI K+ + G+I++V TGRLLL EATA +M KCFDIL +
Sbjct: 612  TFTEFYEVCYCIVKNKQTGEIESVDTGRLLLCEATAAIMAKCFDILGL 659



 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/433 (46%), Positives = 285/433 (65%), Gaps = 33/433 (7%)

Query: 2   SIKELKLKEFISKVNELSTKGFIS-ESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQ 60
           S +E ++ E   ++ EL   G    E    ++   Q +N KLK+R++ L+R+I EEE + 
Sbjct: 13  SQQESQIAELKQQIQELQNGGVEDWEQVPPELEKLQTENQKLKYRISHLKRSIVEEESQG 72

Query: 61  GISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKY 120
           G ++                     +V   L+++F  A++VA+P L +   +V  +    
Sbjct: 73  GDAAG-------------------NNVCGKLTEIFRTALRVAYPALTNAPVAVQPSQ--- 110

Query: 121 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 180
           V KFGD+QCN AM + +  K +G   +P  +AQ I + + S          VI+K+++A 
Sbjct: 111 VEKFGDYQCNSAMIIAQQLKAQGSPVSPRVVAQQIQANIPSN--------DVIEKVDIAG 162

Query: 181 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           PGF+N+ L + +    +  I+  GV PP L+KK +V++D SSPNIAKEMH+GHLRSTIIG
Sbjct: 163 PGFINIHLKKSFITPLVTGILTQGVLPPPLSKKRKVVIDMSSPNIAKEMHIGHLRSTIIG 222

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 300
           ++ISRL+E++GHDV+++NH+GDWGTQFGMLI HL D+FP+YL +SPPI DLQ FYKESK 
Sbjct: 223 ESISRLMEFVGHDVLKVNHLGDWGTQFGMLITHLADQFPNYLNESPPIQDLQKFYKESKV 282

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTERGESF 359
           RFD DE FKKRAY+ VV LQ  +P   KAWE+ICD+S+ +F KIY RL+V  L  RGESF
Sbjct: 283 RFDGDEEFKKRAYKMVVRLQGGEPSIIKAWELICDISKTEFNKIYARLDVKNLIPRGESF 342

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 419
           YQ+ M  +V  LE  G LE DDGRKIM+  D  ++P+TIVKSDGG+TYDTSD+A + QR+
Sbjct: 343 YQERMNVVVQKLEAGGHLEFDDGRKIMFTPD-SAVPLTIVKSDGGYTYDTSDMATLYQRV 401

Query: 420 EEEKADWIVYVTD 432
            E+K + ++YV D
Sbjct: 402 HEDKGERLIYVVD 414



 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 247/343 (72%), Gaps = 13/343 (3%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L+++F  A++VA+P L +   +V  +    V KFGD+QCN AM + +  K +G   +P  
Sbjct: 84   LTEIFRTALRVAYPALTNAPVAVQPSQ---VEKFGDYQCNSAMIIAQQLKAQGSPVSPRV 140

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
            +AQ I + + S          VI+K+++A PGF+N+ L + +    +  I+  GV PP L
Sbjct: 141  VAQQIQANIPSN--------DVIEKVDIAGPGFINIHLKKSFITPLVTGILTQGVLPPPL 192

Query: 1228 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 1287
            +KK +V++D SSPNIAKEMH+GHLRSTIIG++ISRL+E++GHDV+++NH+GDWGTQFGML
Sbjct: 193  SKKRKVVIDMSSPNIAKEMHIGHLRSTIIGESISRLMEFVGHDVLKVNHLGDWGTQFGML 252

Query: 1288 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            I HL D+FP+YL +SPPI DLQ FYKESK RFD DE FKKRAY+ VV LQ  +P   KAW
Sbjct: 253  ITHLADQFPNYLNESPPIQDLQKFYKESKVRFDGDEEFKKRAYKMVVRLQGGEPSIIKAW 312

Query: 1348 EMICDVSRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 1406
            E+ICD+S+ +F KIY RL+V  L  RGESFYQ+ M  +V  LE  G LE DDGRKIM+  
Sbjct: 313  ELICDISKTEFNKIYARLDVKNLIPRGESFYQERMNVVVQKLEAGGHLEFDDGRKIMFTP 372

Query: 1407 DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            D  ++P+TIVKSDGG+TYDTSD+A + QR+ E+K + ++YV D
Sbjct: 373  D-SAVPLTIVKSDGGYTYDTSDMATLYQRVHEDKGERLIYVVD 414


>gi|358340022|dbj|GAA47972.1| arginyl-tRNA synthetase, partial [Clonorchis sinensis]
          Length = 600

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/586 (56%), Positives = 413/586 (70%), Gaps = 15/586 (2%)

Query: 485  FTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQS 544
            F  AV+ AFP+       V   N     +FGD QCN A+ L K F       NP  IA+S
Sbjct: 24   FDFAVKTAFPDHKGHKVQVTVPNND---RFGDLQCNSALRLSKEFGSCDATANPSLIAKS 80

Query: 545  IASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL 604
            I   +            +I+K+EVA PGF+N+ +S+ +   ++K I+ +GVQPP L    
Sbjct: 81   IIDALPQN--------DLIEKVEVAGPGFINIRISKAFVMSELKKILTSGVQPPRLTAHY 132

Query: 605  RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL 664
             V++D SSPNIAKEMHVGHLRSTIIGD I+RLL +LGH V++LNH+GDWGTQFGMLIAHL
Sbjct: 133  SVIIDMSSPNIAKEMHVGHLRSTIIGDGIARLLTFLGHKVLKLNHIGDWGTQFGMLIAHL 192

Query: 665  QDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 724
            Q+ FPD  T  PPI DLQAFYK +K +FDEDE F+ RAY+ VV LQ  DP + + W+ IC
Sbjct: 193  QETFPDVRT-VPPIGDLQAFYKLAKAKFDEDEDFRSRAYKAVVQLQCHDPTHIRMWQQIC 251

Query: 725  DVSRRDFQKIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 783
            ++SRR+FQK+YDRL++  L ERGESFYQ  M  +V  LE   +L+LD+GRKI+W  +   
Sbjct: 252  EISRREFQKVYDRLDIRDLVERGESFYQSRMHDMVRDLETLNMLQLDEGRKILWAPN-CD 310

Query: 784  IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILN 843
            +P+TIVKSDGGFTYDTSDL A+  RI EEKADW++YV D GQG+HF  L   A+  G   
Sbjct: 311  VPLTIVKSDGGFTYDTSDLTALLHRIHEEKADWVIYVVDSGQGLHFNTLWSAAEAVGFYK 370

Query: 844  PNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE 903
            P   R++ V FGVVLGED+KKFKTRSG+TV+L +LLDEGL RS  +L +K R  ELT  E
Sbjct: 371  PKVHRVEHVSFGVVLGEDKKKFKTRSGETVRLVDLLDEGLERSKKRLIEKGRDKELTEDE 430

Query: 904  LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGI 963
               AQ+A+AYGCIKYADLSHNR  DY+FSFDKMLDD+GNTAVYLLYAYTRI SIAR AG 
Sbjct: 431  FKAAQEAIAYGCIKYADLSHNRINDYIFSFDKMLDDKGNTAVYLLYAYTRIRSIARNAGY 490

Query: 964  NSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSE 1023
             SE L   +    +SL+H  E+ LAKT+ R  D+L+ +  D  LH LC+YLYD+S  F+ 
Sbjct: 491  TSEQLANFSDQQALSLDHPAEWKLAKTICRFPDILLRIQNDFLLHTLCDYLYDLSCTFTS 550

Query: 1024 FYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            FYD CYCIE+D E G I  V+TGRL+L EATAKVMK  FDIL +RT
Sbjct: 551  FYDVCYCIERDRETGAILRVNTGRLMLCEATAKVMKCGFDILGLRT 596



 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/339 (54%), Positives = 234/339 (69%), Gaps = 14/339 (4%)

Query: 95  FTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQS 154
           F  AV+ AFP+       V   N     +FGD QCN A+ L K F       NP  IA+S
Sbjct: 24  FDFAVKTAFPDHKGHKVQVTVPNND---RFGDLQCNSALRLSKEFGSCDATANPSLIAKS 80

Query: 155 IASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL 214
           I   +            +I+K+EVA PGF+N+ +S+ +   ++K I+ +GVQPP L    
Sbjct: 81  IIDALPQN--------DLIEKVEVAGPGFINIRISKAFVMSELKKILTSGVQPPRLTAHY 132

Query: 215 RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL 274
            V++D SSPNIAKEMHVGHLRSTIIGD I+RLL +LGH V++LNH+GDWGTQFGMLIAHL
Sbjct: 133 SVIIDMSSPNIAKEMHVGHLRSTIIGDGIARLLTFLGHKVLKLNHIGDWGTQFGMLIAHL 192

Query: 275 QDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 334
           Q+ FPD  T  PPI DLQAFYK +K +FDEDE F+ RAY+ VV LQ  DP + + W+ IC
Sbjct: 193 QETFPDVRT-VPPIGDLQAFYKLAKAKFDEDEDFRSRAYKAVVQLQCHDPTHIRMWQQIC 251

Query: 335 DVSRRDFQKIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 393
           ++SRR+FQK+YDRL++  L ERGESFYQ  M  +V  LE   +L+LD+GRKI+W  +   
Sbjct: 252 EISRREFQKVYDRLDIRDLVERGESFYQSRMHDMVRDLETLNMLQLDEGRKILWAPN-CD 310

Query: 394 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +P+TIVKSDGGFTYDTSDL A+  RI EEKADW++YV D
Sbjct: 311 VPLTIVKSDGGFTYDTSDLTALLHRIHEEKADWVIYVVD 349



 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/339 (54%), Positives = 234/339 (69%), Gaps = 14/339 (4%)

Query: 1112 FTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQS 1171
            F  AV+ AFP+       V   N     +FGD QCN A+ L K F       NP  IA+S
Sbjct: 24   FDFAVKTAFPDHKGHKVQVTVPNND---RFGDLQCNSALRLSKEFGSCDATANPSLIAKS 80

Query: 1172 IASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL 1231
            I   +            +I+K+EVA PGF+N+ +S+ +   ++K I+ +GVQPP L    
Sbjct: 81   IIDALPQN--------DLIEKVEVAGPGFINIRISKAFVMSELKKILTSGVQPPRLTAHY 132

Query: 1232 RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL 1291
             V++D SSPNIAKEMHVGHLRSTIIGD I+RLL +LGH V++LNH+GDWGTQFGMLIAHL
Sbjct: 133  SVIIDMSSPNIAKEMHVGHLRSTIIGDGIARLLTFLGHKVLKLNHIGDWGTQFGMLIAHL 192

Query: 1292 QDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 1351
            Q+ FPD  T  PPI DLQAFYK +K +FDEDE F+ RAY+ VV LQ  DP + + W+ IC
Sbjct: 193  QETFPDVRT-VPPIGDLQAFYKLAKAKFDEDEDFRSRAYKAVVQLQCHDPTHIRMWQQIC 251

Query: 1352 DVSRRDFQKIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 1410
            ++SRR+FQK+YDRL++  L ERGESFYQ  M  +V  LE   +L+LD+GRKI+W  +   
Sbjct: 252  EISRREFQKVYDRLDIRDLVERGESFYQSRMHDMVRDLETLNMLQLDEGRKILWAPN-CD 310

Query: 1411 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +P+TIVKSDGGFTYDTSDL A+  RI EEKADW++YV D
Sbjct: 311  VPLTIVKSDGGFTYDTSDLTALLHRIHEEKADWVIYVVD 349


>gi|449475219|ref|XP_002189938.2| PREDICTED: arginine--tRNA ligase, cytoplasmic [Taeniopygia guttata]
          Length = 617

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/564 (56%), Positives = 424/564 (75%), Gaps = 13/564 (2%)

Query: 472  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF-K 530
            +  +++   L ++F  A+Q A+P+L +    V  + +    KFGD+QCN AM + ++  K
Sbjct: 61   KSMININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQVLLK 117

Query: 531  DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 590
             + +K +P +IA+ I   + +         + I+K+E+A PGF+NV L + +  +Q+  +
Sbjct: 118  TREQKVSPREIAEKIVKSIPAN--------ECIEKVEIAGPGFINVHLRKDFVSKQLSSL 169

Query: 591  IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
            ++NGVQPP + K+ +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E++G+DV+RLNH+
Sbjct: 170  LINGVQPPAIGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFVGYDVLRLNHL 229

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIAHLQDKFPDYL+ SPPI DLQAFYKESK+RFD +E FKKRAYQCVV LQ
Sbjct: 230  GDWGTQFGMLIAHLQDKFPDYLSVSPPIGDLQAFYKESKQRFDTEEEFKKRAYQCVVLLQ 289

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              +PD+ KAW +ICDVSRR+FQKIY+ L++TL ERGESFY + M+ +V   E KG +++D
Sbjct: 290  SKNPDFIKAWNLICDVSRREFQKIYNCLDITLIERGESFYHEMMKDIVKEFEDKGFVQVD 349

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            DGRK+++      +P+TI+KSDGGFTYDTSDLAA++ R+ EEK D ++YV D GQ VH +
Sbjct: 350  DGRKVVFVPGF-PVPLTIMKSDGGFTYDTSDLAALKHRLCEEKGDILIYVVDSGQSVHLQ 408

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
             +    +  G  +P  TR+    FGVVLGED+KKFKTRSGDTV+L +LL+EGL+R++DKL
Sbjct: 409  TVFAAGQMIGWYDPKVTRVAHAAFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRAMDKL 468

Query: 891  KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            KDK R   LTP EL  AQ +VA+GCIKYADLSHNR  DYVFSFDKMLDDRGNTA YLLYA
Sbjct: 469  KDKERDKVLTPEELKAAQTSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLYA 528

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            +TRI +IAR A I+ + L+ AA+   + L+HEKE+ L K +LR  ++L  +  DL LH L
Sbjct: 529  FTRIRAIARLANIDEQMLQKAAREEVLVLDHEKEWKLGKCILRFPEILQKILEDLLLHTL 588

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKD 1034
            C+YLY+++T F+EFYD+CYC+EKD
Sbjct: 589  CDYLYELATTFTEFYDSCYCVEKD 612



 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/431 (48%), Positives = 297/431 (68%), Gaps = 35/431 (8%)

Query: 3   IKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGI 62
            +E ++K   +++  L   G +  S + + L  +  N KLK+RL  L++++ EE  K   
Sbjct: 4   FEENEIKLLTAEIERLKNFGCLGVSPSLEGLRDE--NAKLKYRLNFLKKSLQEERSK--- 58

Query: 63  SSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH 122
                     + K M       +++   L ++F  A+Q A+P+L +    V  + +    
Sbjct: 59  ----------STKSM-------ININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQP--- 98

Query: 123 KFGDFQCNDAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
           KFGD+QCN AM + ++  K + +K +P +IA+ I   + +         + I+K+E+A P
Sbjct: 99  KFGDYQCNSAMGISQVLLKTREQKVSPREIAEKIVKSIPAN--------ECIEKVEIAGP 150

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           GF+NV L + +  +Q+  +++NGVQPP + K+ +V+VDFSSPNIAKEMHVGHLRSTIIG+
Sbjct: 151 GFINVHLRKDFVSKQLSSLLINGVQPPAIGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGE 210

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           ++ RL E++G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYL+ SPPI DLQAFYKESK+R
Sbjct: 211 SMCRLFEFVGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLSVSPPIGDLQAFYKESKQR 270

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 361
           FD +E FKKRAYQCVV LQ  +PD+ KAW +ICDVSRR+FQKIY+ L++TL ERGESFY 
Sbjct: 271 FDTEEEFKKRAYQCVVLLQSKNPDFIKAWNLICDVSRREFQKIYNCLDITLIERGESFYH 330

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 421
           + M+ +V   E KG +++DDGRK+++      +P+TI+KSDGGFTYDTSDLAA++ R+ E
Sbjct: 331 EMMKDIVKEFEDKGFVQVDDGRKVVFVPGF-PVPLTIMKSDGGFTYDTSDLAALKHRLCE 389

Query: 422 EKADWIVYVTD 432
           EK D ++YV D
Sbjct: 390 EKGDILIYVVD 400



 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 190/352 (53%), Positives = 264/352 (75%), Gaps = 13/352 (3%)

Query: 1099 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF-K 1157
            +  +++   L ++F  A+Q A+P+L +    V  + +    KFGD+QCN AM + ++  K
Sbjct: 61   KSMININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQVLLK 117

Query: 1158 DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 1217
             + +K +P +IA+ I   + +         + I+K+E+A PGF+NV L + +  +Q+  +
Sbjct: 118  TREQKVSPREIAEKIVKSIPAN--------ECIEKVEIAGPGFINVHLRKDFVSKQLSSL 169

Query: 1218 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
            ++NGVQPP + K+ +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E++G+DV+RLNH+
Sbjct: 170  LINGVQPPAIGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFVGYDVLRLNHL 229

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLIAHLQDKFPDYL+ SPPI DLQAFYKESK+RFD +E FKKRAYQCVV LQ
Sbjct: 230  GDWGTQFGMLIAHLQDKFPDYLSVSPPIGDLQAFYKESKQRFDTEEEFKKRAYQCVVLLQ 289

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              +PD+ KAW +ICDVSRR+FQKIY+ L++TL ERGESFY + M+ +V   E KG +++D
Sbjct: 290  SKNPDFIKAWNLICDVSRREFQKIYNCLDITLIERGESFYHEMMKDIVKEFEDKGFVQVD 349

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DGRK+++      +P+TI+KSDGGFTYDTSDLAA++ R+ EEK D ++YV D
Sbjct: 350  DGRKVVFVPGF-PVPLTIMKSDGGFTYDTSDLAALKHRLCEEKGDILIYVVD 400


>gi|324507191|gb|ADY43051.1| Arginyl-tRNA synthetase, partial [Ascaris suum]
          Length = 756

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/596 (55%), Positives = 431/596 (72%), Gaps = 17/596 (2%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+   L  +FT AV  A+P+L D   ++  T+   + KFGD+Q N +M + +    +G K
Sbjct: 171  SIVGILKQLFTEAVHKAYPDLLDIPITITETS---IAKFGDYQFNSSMVISQKLGQRGIK 227

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
              P D+A+ I       L   P   K I+K+EVA PG+VNVFL++      I    + GV
Sbjct: 228  TPPRDVAKVI-------LDNIPPCEK-IEKVEVAGPGYVNVFLNKKAIAAIIARTAIKGV 279

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
              P ++K+ RV+VDFSSPNIAKEMHVGHLRSTIIGD+I RL E +G DV+RLNH+GDWGT
Sbjct: 280  SMPRISKR-RVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFELVGFDVIRLNHIGDWGT 338

Query: 656  QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
            QFGMLIAHLQ++FP++LT++PPIADLQAFYKESKKRFDEDE FK RA+ CVV LQ +D D
Sbjct: 339  QFGMLIAHLQNRFPNFLTETPPIADLQAFYKESKKRFDEDEKFKARAHDCVVKLQSYDAD 398

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
            + KAW+MICDVSR+DF +IYDRL++ + ERGESFY+  M  +V  L++KG+L+LDDGRK+
Sbjct: 399  FVKAWQMICDVSRKDFTRIYDRLDIRIIERGESFYRNMMADVVRELDEKGVLKLDDGRKL 458

Query: 776  MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
            M+      IP+T+VKSDGG TYDTSDLAAI+ R+E EKADWI+YV D GQ +H   +   
Sbjct: 459  MFPSG-CEIPLTVVKSDGGNTYDTSDLAAIKHRLEVEKADWIIYVVDSGQSLHLETIFAA 517

Query: 836  AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
            A+  G     + R++ V FG+VLGEDRKKFKTRSGDT++L++LLDEG+RR+  KL++K R
Sbjct: 518  ARDLGWYKCEEKRVEHVSFGLVLGEDRKKFKTRSGDTIRLTDLLDEGIRRAAAKLQEKER 577

Query: 896  HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIA 955
               ++P EL EA+ AVAYGC+KYADLS  R  DYVFSFDKMLDDRGNTAVYLLYAY RI 
Sbjct: 578  DKVMSPQELEEARDAVAYGCVKYADLSQTRTQDYVFSFDKMLDDRGNTAVYLLYAYARIR 637

Query: 956  SIARTAGINSEDLRVAAQSTP---VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            SI R AGI+ E +   AQ+ P   + LEHE E+ LAKT+L+ +D ++ V   L LH +C+
Sbjct: 638  SICRNAGISREQIIDYAQNLPEGALPLEHEAEYKLAKTILKFSDCILTVLDTLFLHQVCD 697

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            Y+Y ++T F +FY++CY I KD EG   T++  RL+L + TA VM  CF IL IR 
Sbjct: 698  YVYSLATTFHDFYNDCYVIHKDREGNT-TIYYHRLVLCQVTADVMANCFQILGIRN 752



 Score =  408 bits (1049), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/438 (50%), Positives = 291/438 (66%), Gaps = 49/438 (11%)

Query: 31  DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMN--VPVR------ 82
           ++  A+ +N KLK+R+ IL+++IAE EK         S+ + A +K+N   PV       
Sbjct: 80  EIAKAKAENDKLKYRICILKQSIAEREKINLAKGIGMSKKQPATEKLNGDAPVEKKAKKE 139

Query: 83  ---------------------DRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVA 114
                                + + V D+       L  +FT AV  A+P+L D   ++ 
Sbjct: 140 GEKGDKKRPVGGGIPKQTKKYNYVRVEDFGDSIVGILKQLFTEAVHKAYPDLLDIPITIT 199

Query: 115 STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVID 174
            T+   + KFGD+Q N +M + +    +G K  P D+A+ I       L   P   K I+
Sbjct: 200 ETS---IAKFGDYQFNSSMVISQKLGQRGIKTPPRDVAKVI-------LDNIPPCEK-IE 248

Query: 175 KIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHL 234
           K+EVA PG+VNVFL++      I    + GV  P ++K+ RV+VDFSSPNIAKEMHVGHL
Sbjct: 249 KVEVAGPGYVNVFLNKKAIAAIIARTAIKGVSMPRISKR-RVVVDFSSPNIAKEMHVGHL 307

Query: 235 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAF 294
           RSTIIGD+I RL E +G DV+RLNH+GDWGTQFGMLIAHLQ++FP++LT++PPIADLQAF
Sbjct: 308 RSTIIGDSICRLFELVGFDVIRLNHIGDWGTQFGMLIAHLQNRFPNFLTETPPIADLQAF 367

Query: 295 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 354
           YKESKKRFDEDE FK RA+ CVV LQ +D D+ KAW+MICDVSR+DF +IYDRL++ + E
Sbjct: 368 YKESKKRFDEDEKFKARAHDCVVKLQSYDADFVKAWQMICDVSRKDFTRIYDRLDIRIIE 427

Query: 355 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           RGESFY+  M  +V  L++KG+L+LDDGRK+M+      IP+T+VKSDGG TYDTSDLAA
Sbjct: 428 RGESFYRNMMADVVRELDEKGVLKLDDGRKLMFPSG-CEIPLTVVKSDGGNTYDTSDLAA 486

Query: 415 IRQRIEEEKADWIVYVTD 432
           I+ R+E EKADWI+YV D
Sbjct: 487 IKHRLEVEKADWIIYVVD 504



 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/347 (57%), Positives = 256/347 (73%), Gaps = 13/347 (3%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+   L  +FT AV  A+P+L D   ++  T+   + KFGD+Q N +M + +    +G K
Sbjct: 171  SIVGILKQLFTEAVHKAYPDLLDIPITITETS---IAKFGDYQFNSSMVISQKLGQRGIK 227

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
              P D+A+ I       L   P   K I+K+EVA PG+VNVFL++      I    + GV
Sbjct: 228  TPPRDVAKVI-------LDNIPPCEK-IEKVEVAGPGYVNVFLNKKAIAAIIARTAIKGV 279

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
              P ++K+ RV+VDFSSPNIAKEMHVGHLRSTIIGD+I RL E +G DV+RLNH+GDWGT
Sbjct: 280  SMPRISKR-RVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFELVGFDVIRLNHIGDWGT 338

Query: 1283 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
            QFGMLIAHLQ++FP++LT++PPIADLQAFYKESKKRFDEDE FK RA+ CVV LQ +D D
Sbjct: 339  QFGMLIAHLQNRFPNFLTETPPIADLQAFYKESKKRFDEDEKFKARAHDCVVKLQSYDAD 398

Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
            + KAW+MICDVSR+DF +IYDRL++ + ERGESFY+  M  +V  L++KG+L+LDDGRK+
Sbjct: 399  FVKAWQMICDVSRKDFTRIYDRLDIRIIERGESFYRNMMADVVRELDEKGVLKLDDGRKL 458

Query: 1403 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            M+      IP+T+VKSDGG TYDTSDLAAI+ R+E EKADWI+YV D
Sbjct: 459  MFPSG-CEIPLTVVKSDGGNTYDTSDLAAIKHRLEVEKADWIIYVVD 504


>gi|444725689|gb|ELW66249.1| Protein KIBRA [Tupaia chinensis]
          Length = 1978

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/616 (53%), Positives = 436/616 (70%), Gaps = 48/616 (7%)

Query: 470  PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
            P ++ +++   L + F +A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 1175 PTKNMININSRLQEAFGYAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 1231

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K K  K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+ +
Sbjct: 1232 KTKELKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQLTN 1283

Query: 590  IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I RL E+ G+DV+RLNH
Sbjct: 1284 LLVNGVQLPAIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESICRLFEFAGYDVLRLNH 1343

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 1344 VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDAEEEFKKRAYQCVVLL 1403

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q   PD+ KAW++ICDVSR                                   +G +++
Sbjct: 1404 QSKSPDFIKAWKLICDVSR-----------------------------------QGFVQV 1428

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ VHF
Sbjct: 1429 DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLLEEKANMIIYVVDSGQSVHF 1487

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +   A+  G  +P  T++   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 1488 QTIFAAAQMIGWYDPKVTQVSHAGFGVVLGEDKKKFKTRSGETVRLLDLLEEGLKRSMDK 1547

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLY
Sbjct: 1548 LKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 1607

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+TRI SIAR A I+ E LR AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH 
Sbjct: 1608 AFTRIRSIARLANIDEEMLRKAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 1667

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            LC+Y+Y+++T F+EFYD+CYC+EKD + GK+  V+  R+LL EA A VM K FDIL I+ 
Sbjct: 1668 LCDYIYELATVFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIKP 1727

Query: 1069 AIAEEEKKQGISSSIS 1084
                + +++  +S++S
Sbjct: 1728 VQRIKSRRKKGASAVS 1743



 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/429 (46%), Positives = 274/429 (63%), Gaps = 69/429 (16%)

Query: 4    KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
            +E ++K   ++++ L   G +  S   + L  + +N KLK+RL IL+R++  E  +    
Sbjct: 1121 QEKEIKSLTAEIDRLKNCGCLEASPNLEQL--REENLKLKYRLNILRRSLQAERSR---- 1174

Query: 64   SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                            P ++ +++   L + F +A++ A+P+L +    V  + +    K
Sbjct: 1175 ----------------PTKNMININSRLQEAFGYAIKAAYPDLENPPLIVTPSQQP---K 1215

Query: 124  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
            FGD+QCN AM + ++ K K  K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 1216 FGDYQCNSAMGISQMLKTKELKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 1267

Query: 184  VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
            +NV L + +  EQ+ +++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 1268 INVHLRKDFVSEQLTNLLVNGVQLPAIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 1327

Query: 244  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
             RL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 1328 CRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 1387

Query: 304  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
             +E FKKRAYQCVV LQ   PD+ KAW++ICDVSR                         
Sbjct: 1388 AEEEFKKRAYQCVVLLQSKSPDFIKAWKLICDVSR------------------------- 1422

Query: 364  MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
                      +G +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 1423 ----------QGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLLEEK 1471

Query: 424  ADWIVYVTD 432
            A+ I+YV D
Sbjct: 1472 ANMIIYVVD 1480



 Score =  371 bits (953), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 184/353 (52%), Positives = 242/353 (68%), Gaps = 47/353 (13%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L + F +A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 1175 PTKNMININSRLQEAFGYAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 1231

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K  K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+ +
Sbjct: 1232 KTKELKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQLTN 1283

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG++I RL E+ G+DV+RLNH
Sbjct: 1284 LLVNGVQLPAIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESICRLFEFAGYDVLRLNH 1343

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV L
Sbjct: 1344 VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDAEEEFKKRAYQCVVLL 1403

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q   PD+ KAW++ICDVSR                                   +G +++
Sbjct: 1404 QSKSPDFIKAWKLICDVSR-----------------------------------QGFVQV 1428

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D
Sbjct: 1429 DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLLEEKANMIIYVVD 1480


>gi|449663743|ref|XP_002169247.2| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Hydra
            magnipapillata]
          Length = 589

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/595 (54%), Positives = 427/595 (71%), Gaps = 14/595 (2%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++++  L+ +F  A+  AFPE  +   S+          FGD+QCN AMA+ K+ K  G+
Sbjct: 2    INIQTALNLLFETAICNAFPEFINPPVSLTVAQNS---NFGDYQCNSAMAIAKVEKKHGK 58

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K +P  IA+ I       L +NP    V+ ++ +A PGF+N+ L + +  + +  ++   
Sbjct: 59   KLSPVVIAEKI----LENLPSNP----VVKEVSIAGPGFINITLEKRFVCDILNKVLHEK 110

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            V PP + KK +V++DFSSPNIAKEMHVGHLRS+IIG++++RLLE+L HDV+RLNHVGDWG
Sbjct: 111  VHPPGVGKKKKVIIDFSSPNIAKEMHVGHLRSSIIGESLARLLEFLNHDVLRLNHVGDWG 170

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHL+DKFP++   SPPI DLQ+FYK SKKRFDED  FKKRAYQ VV LQ  +P
Sbjct: 171  TQFGMLIAHLEDKFPNFKEVSPPIEDLQSFYKASKKRFDEDGEFKKRAYQRVVDLQGGNP 230

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE-LDDGR 773
            D K AW++ICDVSR++FQ+IYDRL++TL ERGES+Y   M ++V  L+K  + E  DDGR
Sbjct: 231  DVKNAWKLICDVSRKEFQRIYDRLDITLIERGESYYNDLMPKIVEDLKKGNICEKADDGR 290

Query: 774  KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLE 833
             I W  +   IP+ +VKSDGGFTYDTSDLAA+ QR+++E  +W++YV D GQG HF+ + 
Sbjct: 291  WIAWAPNM-KIPLILVKSDGGFTYDTSDLAALHQRLKDEHGEWVIYVVDAGQGDHFKQVF 349

Query: 834  ECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK 893
              A+KAG  NP+ TR+D V FGVVLGED+KKFKTRSGDTV+LSELLDEGL+RS+DKL +K
Sbjct: 350  GLAQKAGWYNPSITRVDHVAFGVVLGEDKKKFKTRSGDTVRLSELLDEGLKRSMDKLLEK 409

Query: 894  NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTR 953
             R  EL+P EL  AQ + AYGCIKYADL HNR +DYVFSFDKMLDD+GNTAVYLLYAYTR
Sbjct: 410  ERDKELSPDELKAAQSSTAYGCIKYADLCHNRLMDYVFSFDKMLDDKGNTAVYLLYAYTR 469

Query: 954  IASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEY 1013
            I SI R A ++ + L +      ++L HEKE+ L K L R  +V+     DL LH LCEY
Sbjct: 470  IRSIQRKAKVDEQVLNLYISQNSINLSHEKEWKLGKLLCRFPEVITRCANDLMLHPLCEY 529

Query: 1014 LYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            LY++++  +EFYD CYCIE + E G+I +V   R+ + E  AK  +  F IL ++
Sbjct: 530  LYELASTLTEFYDACYCIEINRETGEILSVDLNRIAILETVAKFFETGFYILGLK 584



 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 250/349 (71%), Gaps = 13/349 (3%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++++  L+ +F  A+  AFPE  +   S+          FGD+QCN AMA+ K+ K  G+
Sbjct: 2   INIQTALNLLFETAICNAFPEFINPPVSLTVAQNS---NFGDYQCNSAMAIAKVEKKHGK 58

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
           K +P  IA+ I       L +NP    V+ ++ +A PGF+N+ L + +  + +  ++   
Sbjct: 59  KLSPVVIAEKI----LENLPSNP----VVKEVSIAGPGFINITLEKRFVCDILNKVLHEK 110

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           V PP + KK +V++DFSSPNIAKEMHVGHLRS+IIG++++RLLE+L HDV+RLNHVGDWG
Sbjct: 111 VHPPGVGKKKKVIIDFSSPNIAKEMHVGHLRSSIIGESLARLLEFLNHDVLRLNHVGDWG 170

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIAHL+DKFP++   SPPI DLQ+FYK SKKRFDED  FKKRAYQ VV LQ  +P
Sbjct: 171 TQFGMLIAHLEDKFPNFKEVSPPIEDLQSFYKASKKRFDEDGEFKKRAYQRVVDLQGGNP 230

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE-LDDGR 383
           D K AW++ICDVSR++FQ+IYDRL++TL ERGES+Y   M ++V  L+K  + E  DDGR
Sbjct: 231 DVKNAWKLICDVSRKEFQRIYDRLDITLIERGESYYNDLMPKIVEDLKKGNICEKADDGR 290

Query: 384 KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            I W  +   IP+ +VKSDGGFTYDTSDLAA+ QR+++E  +W++YV D
Sbjct: 291 WIAWAPNM-KIPLILVKSDGGFTYDTSDLAALHQRLKDEHGEWVIYVVD 338



 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 250/349 (71%), Gaps = 13/349 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++++  L+ +F  A+  AFPE  +   S+          FGD+QCN AMA+ K+ K  G+
Sbjct: 2    INIQTALNLLFETAICNAFPEFINPPVSLTVAQNS---NFGDYQCNSAMAIAKVEKKHGK 58

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K +P  IA+ I       L +NP    V+ ++ +A PGF+N+ L + +  + +  ++   
Sbjct: 59   KLSPVVIAEKI----LENLPSNP----VVKEVSIAGPGFINITLEKRFVCDILNKVLHEK 110

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            V PP + KK +V++DFSSPNIAKEMHVGHLRS+IIG++++RLLE+L HDV+RLNHVGDWG
Sbjct: 111  VHPPGVGKKKKVIIDFSSPNIAKEMHVGHLRSSIIGESLARLLEFLNHDVLRLNHVGDWG 170

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHL+DKFP++   SPPI DLQ+FYK SKKRFDED  FKKRAYQ VV LQ  +P
Sbjct: 171  TQFGMLIAHLEDKFPNFKEVSPPIEDLQSFYKASKKRFDEDGEFKKRAYQRVVDLQGGNP 230

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE-LDDGR 1400
            D K AW++ICDVSR++FQ+IYDRL++TL ERGES+Y   M ++V  L+K  + E  DDGR
Sbjct: 231  DVKNAWKLICDVSRKEFQRIYDRLDITLIERGESYYNDLMPKIVEDLKKGNICEKADDGR 290

Query: 1401 KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             I W  +   IP+ +VKSDGGFTYDTSDLAA+ QR+++E  +W++YV D
Sbjct: 291  WIAWAPNM-KIPLILVKSDGGFTYDTSDLAALHQRLKDEHGEWVIYVVD 338


>gi|90075828|dbj|BAE87594.1| unnamed protein product [Macaca fascicularis]
          Length = 631

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/601 (54%), Positives = 427/601 (71%), Gaps = 42/601 (6%)

Query: 468  NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHV                          
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHV-------------------------- 209

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
               GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 210  ---GDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 266

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 267  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 326

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 327  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSV 385

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF+ +   A+  G  +P  TR+   GFGVVLGED+KKFKTR+G+TV+L +L+ EGL+RS+
Sbjct: 386  HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSM 445

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            DKLK+K R   LT  EL+ AQ ++AYGCIKYADLSHNR  DY+FSFDKMLDDRGNTA YL
Sbjct: 446  DKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYL 505

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL L
Sbjct: 506  LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 565

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI  V+  R+LL EA A VM K FDIL I
Sbjct: 566  HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 625

Query: 1067 R 1067
            +
Sbjct: 626  K 626



 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/429 (47%), Positives = 273/429 (63%), Gaps = 63/429 (14%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +   A  ++   Q +N KLK+RL ILQ+++  E  K    
Sbjct: 15  QEEEIKSLTAEIDRLKNCGCLG--AFPNLEQLQEENLKLKYRLNILQKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF HA++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P + +  +V+VDFSSPNIAKEMHV            
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHV------------ 209

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
                            GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 210 -----------------GDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 252

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  
Sbjct: 253 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDR 312

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 313 MNDIVQEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEK 371

Query: 424 ADWIVYVTD 432
           AD I+YV D
Sbjct: 372 ADMIIYVVD 380



 Score =  370 bits (949), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 187/355 (52%), Positives = 242/355 (68%), Gaps = 41/355 (11%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + +
Sbjct: 67   NKPTKNMININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+
Sbjct: 124  MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              ++VNGVQ P + +  +V+VDFSSPNIAKEMHV                          
Sbjct: 176  TSLLVNGVQLPAVGENKKVIVDFSSPNIAKEMHV-------------------------- 209

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
               GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 210  ---GDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 266

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +
Sbjct: 267  LLQGKNPDITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFV 326

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 327  QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 380


>gi|198426883|ref|XP_002129614.1| PREDICTED: similar to arginyl-tRNA synthetase [Ciona intestinalis]
          Length = 690

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/600 (54%), Positives = 424/600 (70%), Gaps = 18/600 (3%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +++   L+++F H++  +FP L  K     + N+    KFGD+QCN AM +  + K +G 
Sbjct: 97   VNINQRLTEIFLHSISASFPGLKGKLPVSITLNQN--EKFGDYQCNSAMPISGVLKAQGT 154

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K  P  IA+ I       L   PS + +ID   +A PGF+N+ L+  +    + D++V+G
Sbjct: 155  KMAPRQIAELI-------LKNLPS-SDLIDSCNIAGPGFINIRLNVSFLKRALSDVLVHG 206

Query: 595  VQPPTLNKKL-RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
            V+      +  +V++D+SSPNIAKEMHVGHLRSTIIGD I+ L EY GH+V+R+NHVGDW
Sbjct: 207  VRTHHSKGECGKVVIDYSSPNIAKEMHVGHLRSTIIGDCIANLFEYFGHEVLRVNHVGDW 266

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGMLIAHL D FP+Y  +SPPI DLQAFYK+SKKRFD+D  FKKRAY CVV LQ  D
Sbjct: 267  GTQFGMLIAHLTDMFPNYKEESPPIGDLQAFYKQSKKRFDDDPEFKKRAYSCVVKLQSGD 326

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLN-VTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            PD+  AW++ICDVSR++FQ IYDRL  V L ERGESFY   M  ++  +EK+G + ++DG
Sbjct: 327  PDFINAWKLICDVSRKEFQVIYDRLGIVNLIERGESFYHNLMPPVIAEIEKQGYVVVEDG 386

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
            RK+++ E     P+TIVKSDGGFTYDTSDLA I+QRI +E    ++YVTD GQ  HF+ +
Sbjct: 387  RKLVFPEG-SQFPLTIVKSDGGFTYDTSDLACIKQRIFDESGANLIYVTDAGQAAHFKAI 445

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
               A+K G  +P  TR++ V FGVVLGEDRKKFKTRSG+TV+L+ LLDEG +R  +KLK+
Sbjct: 446  YSVARKMGWYDPQVTRVEHVAFGVVLGEDRKKFKTRSGETVRLAALLDEGRKRCEEKLKE 505

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
            K R  ELTP E   AQ+AVAYGCIKYADLSHNR  DYVFSFDKML+DRGNTA YLLYAYT
Sbjct: 506  KGRDKELTPEEFKAAQEAVAYGCIKYADLSHNRINDYVFSFDKMLEDRGNTAAYLLYAYT 565

Query: 953  RIASIARTAGINSEDLRVAAQS----TPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            RI SIAR A ++ E+L+ AA S      + LEH KE  LA+ + R  +VL  V  DL  H
Sbjct: 566  RIKSIARVAKVSREELKEAASSFYDDDGLPLEHAKELKLARFITRFPEVLQRVCDDLAPH 625

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
             LC+YLY+++T ++EFYD CYC+EKD + G +  +H  RLLL +AT  VM +CF IL I+
Sbjct: 626  TLCDYLYELATVYTEFYDVCYCVEKDRKTGDVVKIHKHRLLLCDATVAVMDQCFKILGIK 685



 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/409 (48%), Positives = 264/409 (64%), Gaps = 21/409 (5%)

Query: 26  ESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRM 85
           E  +E  L     N KL ++   LQRA+  E  +Q +       T      +N+  R   
Sbjct: 46  EEMSEKSLKLMASNAKLAYQATHLQRALDAEVSQQRVPEFTQQTTNFNDGMVNINQR--- 102

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
                L+++F H++  +FP L  K     + N+    KFGD+QCN AM +  + K +G K
Sbjct: 103 -----LTEIFLHSISASFPGLKGKLPVSITLNQN--EKFGDYQCNSAMPISGVLKAQGTK 155

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
             P  IA+ I       L   PS + +ID   +A PGF+N+ L+  +    + D++V+GV
Sbjct: 156 MAPRQIAELI-------LKNLPS-SDLIDSCNIAGPGFINIRLNVSFLKRALSDVLVHGV 207

Query: 206 QPPTLNKKL-RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           +      +  +V++D+SSPNIAKEMHVGHLRSTIIGD I+ L EY GH+V+R+NHVGDWG
Sbjct: 208 RTHHSKGECGKVVIDYSSPNIAKEMHVGHLRSTIIGDCIANLFEYFGHEVLRVNHVGDWG 267

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIAHL D FP+Y  +SPPI DLQAFYK+SKKRFD+D  FKKRAY CVV LQ  DP
Sbjct: 268 TQFGMLIAHLTDMFPNYKEESPPIGDLQAFYKQSKKRFDDDPEFKKRAYSCVVKLQSGDP 327

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLN-VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
           D+  AW++ICDVSR++FQ IYDRL  V L ERGESFY   M  ++  +EK+G + ++DGR
Sbjct: 328 DFINAWKLICDVSRKEFQVIYDRLGIVNLIERGESFYHNLMPPVIAEIEKQGYVVVEDGR 387

Query: 384 KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           K+++ E     P+TIVKSDGGFTYDTSDLA I+QRI +E    ++YVTD
Sbjct: 388 KLVFPEG-SQFPLTIVKSDGGFTYDTSDLACIKQRIFDESGANLIYVTD 435



 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/404 (47%), Positives = 263/404 (65%), Gaps = 19/404 (4%)

Query: 1049 LAEATAKVMKKCFDILNIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRM-SVRDY 1107
            ++E + K+M       N + A      ++ + + +S Q      +      D M ++   
Sbjct: 48   MSEKSLKLMAS-----NAKLAYQATHLQRALDAEVSQQRVPEFTQQTTNFNDGMVNINQR 102

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L+++F H++  +FP L  K     + N+    KFGD+QCN AM +  + K +G K  P  
Sbjct: 103  LTEIFLHSISASFPGLKGKLPVSITLNQN--EKFGDYQCNSAMPISGVLKAQGTKMAPRQ 160

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
            IA+ I       L   PS + +ID   +A PGF+N+ L+  +    + D++V+GV+    
Sbjct: 161  IAELI-------LKNLPS-SDLIDSCNIAGPGFINIRLNVSFLKRALSDVLVHGVRTHHS 212

Query: 1228 NKKL-RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
              +  +V++D+SSPNIAKEMHVGHLRSTIIGD I+ L EY GH+V+R+NHVGDWGTQFGM
Sbjct: 213  KGECGKVVIDYSSPNIAKEMHVGHLRSTIIGDCIANLFEYFGHEVLRVNHVGDWGTQFGM 272

Query: 1287 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 1346
            LIAHL D FP+Y  +SPPI DLQAFYK+SKKRFD+D  FKKRAY CVV LQ  DPD+  A
Sbjct: 273  LIAHLTDMFPNYKEESPPIGDLQAFYKQSKKRFDDDPEFKKRAYSCVVKLQSGDPDFINA 332

Query: 1347 WEMICDVSRRDFQKIYDRLN-VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWG 1405
            W++ICDVSR++FQ IYDRL  V L ERGESFY   M  ++  +EK+G + ++DGRK+++ 
Sbjct: 333  WKLICDVSRKEFQVIYDRLGIVNLIERGESFYHNLMPPVIAEIEKQGYVVVEDGRKLVFP 392

Query: 1406 EDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            E     P+TIVKSDGGFTYDTSDLA I+QRI +E    ++YVTD
Sbjct: 393  EG-SQFPLTIVKSDGGFTYDTSDLACIKQRIFDESGANLIYVTD 435


>gi|443718168|gb|ELU08913.1| hypothetical protein CAPTEDRAFT_159812 [Capitella teleta]
          Length = 543

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/548 (58%), Positives = 406/548 (74%), Gaps = 11/548 (2%)

Query: 523  MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 582
            M L K+ KDKG K NP +IAQ+IA+ V      NP    +I+K++VA PGF+NV+L++ Y
Sbjct: 1    MGLVKMLKDKGVKANPREIAQNIANNVPE----NP----LIEKVDVAGPGFINVYLTKAY 52

Query: 583  AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 642
              ++I +++  GV+PP +  + RVLVD SSPNIAKEMHVGHLRSTIIGD I RL E++GH
Sbjct: 53   VIDEINNLLSMGVRPPHVGARKRVLVDMSSPNIAKEMHVGHLRSTIIGDAICRLCEFVGH 112

Query: 643  DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 702
            DV+RLNH+GDWGTQFGMLIAHLQDKFP+YL+ SPPI DL AFY+ESK+RFD +E FK RA
Sbjct: 113  DVLRLNHLGDWGTQFGMLIAHLQDKFPNYLSVSPPIQDLMAFYRESKQRFDNEEEFKVRA 172

Query: 703  YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYL 761
            Y  VV LQ +DPD  KAW +ICDVSR +F KIY RL++  L +RGES+YQ  M ++V  L
Sbjct: 173  YASVVKLQSYDPDCVKAWTLICDVSRNEFSKIYKRLDIKNLVDRGESYYQPIMPKVVEIL 232

Query: 762  EKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
            +K GL +++DGRKI W     S+P+TIVKSDGGFTYDTSD+AA+ QR+ EEKADW++YV 
Sbjct: 233  DKLGLTKVEDGRKICWVPGH-SVPLTIVKSDGGFTYDTSDMAALHQRLFEEKADWLLYVV 291

Query: 822  DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
            DLGQ VH     + A  AG  +   TR++ VGFGVVLGED+KKFKTRSGDTV+L ELLDE
Sbjct: 292  DLGQNVHLETCYDAAAAAGWCDRKTTRIEHVGFGVVLGEDKKKFKTRSGDTVRLVELLDE 351

Query: 882  GLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
            G+RRS  +L+++ R   L   E + A++AVAYGCIKYADLSHNR  DYVFSFDKMLD +G
Sbjct: 352  GIRRSEARLREEGRDKVLNEEEFNAAKEAVAYGCIKYADLSHNRVHDYVFSFDKMLDSKG 411

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
            NTAVYL YAY RI SIAR A +  ED+  A     +SL+H KE+ LAK LLR  D+++  
Sbjct: 412  NTAVYLQYAYMRIQSIARAANVKPEDIEAAIGKVQLSLDHPKEWKLAKCLLRFPDIVLRN 471

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKD-AEGKIKTVHTGRLLLAEATAKVMKKC 1060
              D  +H LCEYLY++   F+EF+D CY +EKD   G +  V+  RLLL  ATA++M+  
Sbjct: 472  MDDFLMHILCEYLYELCGCFTEFWDACYVVEKDKTTGNVVKVNMDRLLLCTATARIMEAG 531

Query: 1061 FDILNIRT 1068
            F IL IRT
Sbjct: 532  FRILGIRT 539



 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/301 (61%), Positives = 234/301 (77%), Gaps = 10/301 (3%)

Query: 133 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 192
           M L K+ KDKG K NP +IAQ+IA+ V      NP    +I+K++VA PGF+NV+L++ Y
Sbjct: 1   MGLVKMLKDKGVKANPREIAQNIANNVPE----NP----LIEKVDVAGPGFINVYLTKAY 52

Query: 193 AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 252
             ++I +++  GV+PP +  + RVLVD SSPNIAKEMHVGHLRSTIIGD I RL E++GH
Sbjct: 53  VIDEINNLLSMGVRPPHVGARKRVLVDMSSPNIAKEMHVGHLRSTIIGDAICRLCEFVGH 112

Query: 253 DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 312
           DV+RLNH+GDWGTQFGMLIAHLQDKFP+YL+ SPPI DL AFY+ESK+RFD +E FK RA
Sbjct: 113 DVLRLNHLGDWGTQFGMLIAHLQDKFPNYLSVSPPIQDLMAFYRESKQRFDNEEEFKVRA 172

Query: 313 YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYL 371
           Y  VV LQ +DPD  KAW +ICDVSR +F KIY RL++  L +RGES+YQ  M ++V  L
Sbjct: 173 YASVVKLQSYDPDCVKAWTLICDVSRNEFSKIYKRLDIKNLVDRGESYYQPIMPKVVEIL 232

Query: 372 EKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
           +K GL +++DGRKI W     S+P+TIVKSDGGFTYDTSD+AA+ QR+ EEKADW++YV 
Sbjct: 233 DKLGLTKVEDGRKICWVPGH-SVPLTIVKSDGGFTYDTSDMAALHQRLFEEKADWLLYVV 291

Query: 432 D 432
           D
Sbjct: 292 D 292



 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/301 (61%), Positives = 234/301 (77%), Gaps = 10/301 (3%)

Query: 1150 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 1209
            M L K+ KDKG K NP +IAQ+IA+ V      NP    +I+K++VA PGF+NV+L++ Y
Sbjct: 1    MGLVKMLKDKGVKANPREIAQNIANNVPE----NP----LIEKVDVAGPGFINVYLTKAY 52

Query: 1210 AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 1269
              ++I +++  GV+PP +  + RVLVD SSPNIAKEMHVGHLRSTIIGD I RL E++GH
Sbjct: 53   VIDEINNLLSMGVRPPHVGARKRVLVDMSSPNIAKEMHVGHLRSTIIGDAICRLCEFVGH 112

Query: 1270 DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 1329
            DV+RLNH+GDWGTQFGMLIAHLQDKFP+YL+ SPPI DL AFY+ESK+RFD +E FK RA
Sbjct: 113  DVLRLNHLGDWGTQFGMLIAHLQDKFPNYLSVSPPIQDLMAFYRESKQRFDNEEEFKVRA 172

Query: 1330 YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYL 1388
            Y  VV LQ +DPD  KAW +ICDVSR +F KIY RL++  L +RGES+YQ  M ++V  L
Sbjct: 173  YASVVKLQSYDPDCVKAWTLICDVSRNEFSKIYKRLDIKNLVDRGESYYQPIMPKVVEIL 232

Query: 1389 EKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
            +K GL +++DGRKI W     S+P+TIVKSDGGFTYDTSD+AA+ QR+ EEKADW++YV 
Sbjct: 233  DKLGLTKVEDGRKICWVPGH-SVPLTIVKSDGGFTYDTSDMAALHQRLFEEKADWLLYVV 291

Query: 1449 D 1449
            D
Sbjct: 292  D 292


>gi|256074367|ref|XP_002573497.1| arginyl-tRNA synthetase [Schistosoma mansoni]
          Length = 629

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/630 (50%), Positives = 442/630 (70%), Gaps = 19/630 (3%)

Query: 442  AIAEEEKKQGISSSSSSQTKGTAKKMNVPVR-DRMSVRDYLSDVFTHAVQVAFPELGDKT 500
            AI       G++  +S   K   K++N  V+ + +S++  L+ +F +A++  F  +  K 
Sbjct: 14   AIYNYIHSMGLTGYASICFKEYLKQLNDHVQYNSISIQAALAALFDYAIKTVF--INTKH 71

Query: 501  ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 560
            +   S   K    FGD+QCN A++   I K+    +NPFDIA+SI + +         + 
Sbjct: 72   SVQLSVPTK--RSFGDYQCNSALS---IRKESNNDQNPFDIAKSIVAAL--------PVN 118

Query: 561  KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
             +I+K++V  PGF+N+++ + +   +++ I+++GV PP +  K  V+VD SSPNIAKEMH
Sbjct: 119  DLIEKVDVVPPGFINIWIKQRFISNEVRKILLHGVTPPFIPHKYSVIVDMSSPNIAKEMH 178

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
            VGHLRSTIIG++ISRLL +LGH V++LNH+GDWGTQFGMLIAHL++ +PD+ T +PPI+D
Sbjct: 179  VGHLRSTIIGESISRLLSFLGHKVLKLNHLGDWGTQFGMLIAHLKEIYPDHKT-APPISD 237

Query: 681  LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 740
            LQAFYK SK R+DE++ F +RA+  VV LQ+ DP+Y  AW+ ICD+SR++F  +Y RL +
Sbjct: 238  LQAFYKTSKTRYDEEKDFNQRAHMAVVKLQQNDPEYVHAWKQICDISRKEFDDVYHRLGI 297

Query: 741  -TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 799
              L ERGESFYQ  ME+ V  L+ + +L+ D+GR I+W   +  +P+T+VKSDGGFTYDT
Sbjct: 298  ENLIERGESFYQSRMEEFVNDLKSQNVLQEDEGRLILW-PPKCEVPLTVVKSDGGFTYDT 356

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            SDL A+ QR+ EEKADW++YV D+GQ VH   +   A+  G  NPN  ++  +GFGVVLG
Sbjct: 357  SDLTALLQRLHEEKADWVLYVVDMGQSVHLNTVFAGAEMLGYYNPNVHKVQHIGFGVVLG 416

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            ED+KKFKTRSGDTV+L +LLDEGL R+ ++L +K R+ ELT  E   AQ+AVAYGCIKYA
Sbjct: 417  EDKKKFKTRSGDTVRLVDLLDEGLERAKNRLLEKERNKELTEAEFERAQKAVAYGCIKYA 476

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLSH+R +DYVFSFD+MLDD+GNTAVYLLYAYTRI SI R AG + + +   +++ P+  
Sbjct: 477  DLSHSRTIDYVFSFDRMLDDKGNTAVYLLYAYTRIRSIIRNAGYSEKTINEISKTVPLIF 536

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
            EH  E  LAK L R+ D+L+ +  D  LH LC+YLYD+S  F+ FYD CYCIE++ E   
Sbjct: 537  EHPMELTLAKALCRLPDILLKIQNDFLLHSLCDYLYDLSCDFTNFYDACYCIERNQETGD 596

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRTA 1069
              ++  R++L EATA+VMK  FDIL I T 
Sbjct: 597  VQINKERIVLCEATARVMKCGFDILGIETV 626



 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 182/387 (47%), Positives = 266/387 (68%), Gaps = 19/387 (4%)

Query: 1065 NIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVR-DRMSVRDYLSDVFTHAVQVAFPEL 1123
            N  +AI       G++   S   K   K++N  V+ + +S++  L+ +F +A++  F  +
Sbjct: 10   NRESAIYNYIHSMGLTGYASICFKEYLKQLNDHVQYNSISIQAALAALFDYAIKTVF--I 67

Query: 1124 GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATN 1183
              K +   S   K    FGD+QCN A++   I K+    +NPFDIA+SI + +       
Sbjct: 68   NTKHSVQLSVPTK--RSFGDYQCNSALS---IRKESNNDQNPFDIAKSIVAAL------- 115

Query: 1184 PSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIA 1243
              +  +I+K++V  PGF+N+++ + +   +++ I+++GV PP +  K  V+VD SSPNIA
Sbjct: 116  -PVNDLIEKVDVVPPGFINIWIKQRFISNEVRKILLHGVTPPFIPHKYSVIVDMSSPNIA 174

Query: 1244 KEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP 1303
            KEMHVGHLRSTIIG++ISRLL +LGH V++LNH+GDWGTQFGMLIAHL++ +PD+ T +P
Sbjct: 175  KEMHVGHLRSTIIGESISRLLSFLGHKVLKLNHLGDWGTQFGMLIAHLKEIYPDHKT-AP 233

Query: 1304 PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYD 1363
            PI+DLQAFYK SK R+DE++ F +RA+  VV LQ+ DP+Y  AW+ ICD+SR++F  +Y 
Sbjct: 234  PISDLQAFYKTSKTRYDEEKDFNQRAHMAVVKLQQNDPEYVHAWKQICDISRKEFDDVYH 293

Query: 1364 RLNV-TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 1422
            RL +  L ERGESFYQ  ME+ V  L+ + +L+ D+GR I+W   +  +P+T+VKSDGGF
Sbjct: 294  RLGIENLIERGESFYQSRMEEFVNDLKSQNVLQEDEGRLILW-PPKCEVPLTVVKSDGGF 352

Query: 1423 TYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            TYDTSDL A+ QR+ EEKADW++YV D
Sbjct: 353  TYDTSDLTALLQRLHEEKADWVLYVVD 379



 Score =  363 bits (931), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 181/385 (47%), Positives = 265/385 (68%), Gaps = 19/385 (4%)

Query: 50  QRAIAEEEKKQGISSSISSQTKGAAKKMNVPVR-DRMSVRDYLSDVFTHAVQVAFPELGD 108
           + AI       G++   S   K   K++N  V+ + +S++  L+ +F +A++  F  +  
Sbjct: 12  ESAIYNYIHSMGLTGYASICFKEYLKQLNDHVQYNSISIQAALAALFDYAIKTVF--INT 69

Query: 109 KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 168
           K +   S   K    FGD+QCN A++   I K+    +NPFDIA+SI + +         
Sbjct: 70  KHSVQLSVPTK--RSFGDYQCNSALS---IRKESNNDQNPFDIAKSIVAAL--------P 116

Query: 169 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 228
           +  +I+K++V  PGF+N+++ + +   +++ I+++GV PP +  K  V+VD SSPNIAKE
Sbjct: 117 VNDLIEKVDVVPPGFINIWIKQRFISNEVRKILLHGVTPPFIPHKYSVIVDMSSPNIAKE 176

Query: 229 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 288
           MHVGHLRSTIIG++ISRLL +LGH V++LNH+GDWGTQFGMLIAHL++ +PD+ T +PPI
Sbjct: 177 MHVGHLRSTIIGESISRLLSFLGHKVLKLNHLGDWGTQFGMLIAHLKEIYPDHKT-APPI 235

Query: 289 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 348
           +DLQAFYK SK R+DE++ F +RA+  VV LQ+ DP+Y  AW+ ICD+SR++F  +Y RL
Sbjct: 236 SDLQAFYKTSKTRYDEEKDFNQRAHMAVVKLQQNDPEYVHAWKQICDISRKEFDDVYHRL 295

Query: 349 NV-TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTY 407
            +  L ERGESFYQ  ME+ V  L+ + +L+ D+GR I+W   +  +P+T+VKSDGGFTY
Sbjct: 296 GIENLIERGESFYQSRMEEFVNDLKSQNVLQEDEGRLILW-PPKCEVPLTVVKSDGGFTY 354

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTD 432
           DTSDL A+ QR+ EEKADW++YV D
Sbjct: 355 DTSDLTALLQRLHEEKADWVLYVVD 379


>gi|426231133|ref|XP_004009597.1| PREDICTED: arginine--tRNA ligase, cytoplasmic [Ovis aries]
          Length = 626

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/608 (52%), Positives = 423/608 (69%), Gaps = 47/608 (7%)

Query: 461  KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
            K    + N P ++ +++   L +VF  A++ A+P L +    V  + +    KFGD+QCN
Sbjct: 60   KSLQAERNKPTKNMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---KFGDYQCN 116

Query: 521  DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
             AM +C++ K K +K NP +IA++I       L  N    + I+K+E+A PGF+N+ L +
Sbjct: 117  SAMGICQMLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGFINIHLRK 168

Query: 581  VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
             +  +Q+ +++VNGV+ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ 
Sbjct: 169  GFVSQQLTNLLVNGVKIPAIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVCRLFEFA 228

Query: 641  GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
            G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKK
Sbjct: 229  GYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288

Query: 701  RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
            RAYQCVV LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V  
Sbjct: 289  RAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLVERGESFYQDKMHDIVKE 348

Query: 761  LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
             E +G +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349  FEDRGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ +HF+ +   A+  G  +P  TR+   GFGVVLGED+                  
Sbjct: 408  VDNGQSLHFQTIFGAAQMIGWYDPEVTRVSHAGFGVVLGEDK------------------ 449

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
                              LT  EL  AQ +VAYGCIKYADLSHNR  DY+FSFDKMLDDR
Sbjct: 450  ----------------LVLTTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR 493

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYA+TRI SIAR A I+ E LR AA+ T + L+HEKE+ L + +LR  +VL  
Sbjct: 494  GNTAAYLLYAFTRIRSIARLANIDEEMLRKAARETKIILDHEKEWKLGRCILRFPEVLQK 553

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + G++  V+  R+LL EA A VM K
Sbjct: 554  ILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQSGEVLKVNMWRMLLCEAVAAVMAK 613

Query: 1060 CFDILNIR 1067
             FDIL I+
Sbjct: 614  GFDILGIK 621



 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/435 (49%), Positives = 303/435 (69%), Gaps = 35/435 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L  K +    A+ D+   + +N KLK+RL IL++++  E  K    
Sbjct: 15  QEREIKFLTAEIDRL--KNYSCSEASADLEKLREENLKLKYRLNILRKSLQAERNK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM +C++ K K +K NP +IA++I       L  N    + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGICQMLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L + +  +Q+ +++VNGV+ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INIHLRKGFVSQQLTNLLVNGVKIPAIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESV 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 CRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  
Sbjct: 282 TEEEFKKRAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLVERGESFYQDK 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MHDIVKEFEDRGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH-RSYH 437
           AD I+YV D+ +S H
Sbjct: 401 ADMIIYVVDNGQSLH 415



 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/361 (55%), Positives = 271/361 (75%), Gaps = 13/361 (3%)

Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
            N P ++ +++   L +VF  A++ A+P L +    V  + +    KFGD+QCN AM +C+
Sbjct: 67   NKPTKNMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---KFGDYQCNSAMGICQ 123

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            + K K +K NP +IA++I       L  N    + I+K+E+A PGF+N+ L + +  +Q+
Sbjct: 124  MLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGFINIHLRKGFVSQQL 175

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
             +++VNGV+ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G++V+RL
Sbjct: 176  TNLLVNGVKIPAIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVCRLFEFAGYNVLRL 235

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236  NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +PD  KAW++ICDVSR++F KIY+ L+++L ERGESFYQ  M  +V   E +G +
Sbjct: 296  LLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLVERGESFYQDKMHDIVKEFEDRGFV 355

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
            ++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S 
Sbjct: 356  QVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSL 414

Query: 1454 H 1454
            H
Sbjct: 415  H 415


>gi|443718167|gb|ELU08912.1| hypothetical protein CAPTEDRAFT_225710 [Capitella teleta]
          Length = 656

 Score =  637 bits (1642), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 318/619 (51%), Positives = 429/619 (69%), Gaps = 17/619 (2%)

Query: 454  SSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 513
            S ++ ++KG+        ++ +S+   LS +F  A+Q A+P+L D   +V  + ++    
Sbjct: 47   SLAAEESKGSKVAFVSDKKNMVSIMTGLSQLFGQAIQSAYPDLVDPPTTVVPSTQR---- 102

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+QCN AM L K+ KDKG K NP +IAQ+IA+ V+     NP    +I+K++VA PGF
Sbjct: 103  FGDYQCNSAMGLVKMLKDKGVKANPREIAQNIANNVSE----NP----LIEKVDVAGPGF 154

Query: 574  VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGH--LRSTIIGD 631
            +NV+L++ Y  ++I +++  GV+PP +  + RVLVD SSPNIAK MHVGH  LRSTIIGD
Sbjct: 155  INVYLTKAYVIDEINNLLSMGVRPPYVGARKRVLVDMSSPNIAKVMHVGHYVLRSTIIGD 214

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
             I RL E++GHDV++LNH+GDWG + GMLI + QD+FP+YL+ SP I DL  F +ESK+R
Sbjct: 215  AICRLCEFVGHDVLKLNHLGDWGIEIGMLITNFQDEFPNYLSISPLIQDLTTFIQESKQR 274

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTERGESFY 750
            FD +E FK RAY  VV LQ +DPD  KAW +ICDVSR + + IY RL++  L +RGES+Y
Sbjct: 275  FDNEEEFKARAYASVVKLQSYDPDCVKAWTLICDVSRNELRNIYKRLDIKNLVDRGESYY 334

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 810
            Q  M ++V  L+K GL +++DGRKI W     S+P+TIVKSDGGFTYDTSD+AA+ QR+ 
Sbjct: 335  QPIMPKVVEILDKSGLTKVEDGRKICWVPGH-SVPLTIVKSDGGFTYDTSDMAALHQRLF 393

Query: 811  EEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSG 870
            +EKADW++YV +  Q  H     + A  AG  +   TR++ VGFGVVLGED+K+FKT  G
Sbjct: 394  KEKADWLLYVVNQSQNEHLETCYDAAAAAGWCDRKTTRIEHVGFGVVLGEDKKRFKTVYG 453

Query: 871  DTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYV 930
            D V + + LDEG+RRS  +L+++ R   L   E + A++AVAYGCIKYADLSHNR  DYV
Sbjct: 454  DPVLVVDFLDEGIRRSEARLREEGRDKVLNEEEFNAAKEAVAYGCIKYADLSHNRVHDYV 513

Query: 931  FSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKT 990
            FSFDKMLD +GNTAVYL YAY RI SIAR A +  ED+  A     +SL+H KE+ LAK 
Sbjct: 514  FSFDKMLDSKGNTAVYLQYAYMRIQSIARAANVKPEDIEAAIGKVQLSLDHPKEWKLAKC 573

Query: 991  LLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKD-AEGKIKTVHTGRLLL 1049
            LLR  D+++    D  +H LCEYLY++   F+EF+D CY +EKD   G +  V+  RLLL
Sbjct: 574  LLRFPDIVLRNMDDFLMHILCEYLYELCGCFTEFWDACYVVEKDKTTGNVVKVNMDRLLL 633

Query: 1050 AEATAKVMKKCFDILNIRT 1068
              ATA++M+  F IL IRT
Sbjct: 634  CTATARIMEAGFRILGIRT 652



 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/415 (48%), Positives = 287/415 (69%), Gaps = 33/415 (7%)

Query: 27  SATEDVLAAQLQ-----NTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPV 81
           +++ DV + +L+      +KLK+++A LQR++A EE K    + +S +            
Sbjct: 17  TSSADVCSPELEILRSEKSKLKYQMAHLQRSLAAEESKGSKVAFVSDK------------ 64

Query: 82  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           ++ +S+   LS +F  A+Q A+P+L D   +V  + ++    FGD+QCN AM L K+ KD
Sbjct: 65  KNMVSIMTGLSQLFGQAIQSAYPDLVDPPTTVVPSTQR----FGDYQCNSAMGLVKMLKD 120

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
           KG K NP +IAQ+IA+ V+     NP    +I+K++VA PGF+NV+L++ Y  ++I +++
Sbjct: 121 KGVKANPREIAQNIANNVSE----NP----LIEKVDVAGPGFINVYLTKAYVIDEINNLL 172

Query: 202 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGH--LRSTIIGDTISRLLEYLGHDVVRLNH 259
             GV+PP +  + RVLVD SSPNIAK MHVGH  LRSTIIGD I RL E++GHDV++LNH
Sbjct: 173 SMGVRPPYVGARKRVLVDMSSPNIAKVMHVGHYVLRSTIIGDAICRLCEFVGHDVLKLNH 232

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           +GDWG + GMLI + QD+FP+YL+ SP I DL  F +ESK+RFD +E FK RAY  VV L
Sbjct: 233 LGDWGIEIGMLITNFQDEFPNYLSISPLIQDLTTFIQESKQRFDNEEEFKARAYASVVKL 292

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYLEKKGLLE 378
           Q +DPD  KAW +ICDVSR + + IY RL++  L +RGES+YQ  M ++V  L+K GL +
Sbjct: 293 QSYDPDCVKAWTLICDVSRNELRNIYKRLDIKNLVDRGESYYQPIMPKVVEILDKSGLTK 352

Query: 379 LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           ++DGRKI W     S+P+TIVKSDGGFTYDTSD+AA+ QR+ +EKADW++YV + 
Sbjct: 353 VEDGRKICWVPGH-SVPLTIVKSDGGFTYDTSDMAALHQRLFKEKADWLLYVVNQ 406



 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/417 (47%), Positives = 280/417 (67%), Gaps = 19/417 (4%)

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIAEEEKKQGISSSISSQTKGAAKKMNV 1096
             +I  +  G+L    ++A V     +IL    +  + +      S  + ++KG+      
Sbjct: 6    AEISAIQEGKL---TSSADVCSPELEILRSEKSKLKYQMAHLQRSLAAEESKGSKVAFVS 62

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
              ++ +S+   LS +F  A+Q A+P+L D   +V  + ++    FGD+QCN AM L K+ 
Sbjct: 63   DKKNMVSIMTGLSQLFGQAIQSAYPDLVDPPTTVVPSTQR----FGDYQCNSAMGLVKML 118

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            KDKG K NP +IAQ+IA+ V+     NP    +I+K++VA PGF+NV+L++ Y  ++I +
Sbjct: 119  KDKGVKANPREIAQNIANNVSE----NP----LIEKVDVAGPGFINVYLTKAYVIDEINN 170

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGH--LRSTIIGDTISRLLEYLGHDVVRL 1274
            ++  GV+PP +  + RVLVD SSPNIAK MHVGH  LRSTIIGD I RL E++GHDV++L
Sbjct: 171  LLSMGVRPPYVGARKRVLVDMSSPNIAKVMHVGHYVLRSTIIGDAICRLCEFVGHDVLKL 230

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            NH+GDWG + GMLI + QD+FP+YL+ SP I DL  F +ESK+RFD +E FK RAY  VV
Sbjct: 231  NHLGDWGIEIGMLITNFQDEFPNYLSISPLIQDLTTFIQESKQRFDNEEEFKARAYASVV 290

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYLEKKGL 1393
             LQ +DPD  KAW +ICDVSR + + IY RL++  L +RGES+YQ  M ++V  L+K GL
Sbjct: 291  KLQSYDPDCVKAWTLICDVSRNELRNIYKRLDIKNLVDRGESYYQPIMPKVVEILDKSGL 350

Query: 1394 LELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +++DGRKI W     S+P+TIVKSDGGFTYDTSD+AA+ QR+ +EKADW++YV + 
Sbjct: 351  TKVEDGRKICWVPGH-SVPLTIVKSDGGFTYDTSDMAALHQRLFKEKADWLLYVVNQ 406


>gi|313224957|emb|CBY20749.1| unnamed protein product [Oikopleura dioica]
          Length = 653

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/597 (53%), Positives = 411/597 (68%), Gaps = 16/597 (2%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+ D L  +FT A+  AFP +    A+V  T+ K   KFGD+QCN +M +  + KD GEK
Sbjct: 65   SILDSLVSLFTVAIAGAFPNVPFIKAAVNPTSPKQ-EKFGDYQCNSSMQIAGMLKDAGEK 123

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
              P D+A+ I   + S          +I +  +A PGF+NVF+ + Y   +I ++   GV
Sbjct: 124  IAPRDVAKKILDNIPSN--------NLIKETTIAGPGFINVFMCQKYMVNRIGELNNLGV 175

Query: 596  Q-PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            Q   + ++  +V+VD+SSPNIAKEMHVGHLRSTIIGD+I+ L E  G++V+R+NHVGDWG
Sbjct: 176  QYDKSKSRGRKVVVDYSSPNIAKEMHVGHLRSTIIGDSIANLFEAYGYEVLRINHVGDWG 235

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAHL D FPDY    P I+DLQ FYKESKKRFD++E FKKRAY+ VV LQ  DP
Sbjct: 236  TQFGMLIAHLIDLFPDYDKNVPRISDLQKFYKESKKRFDDEEDFKKRAYENVVKLQSHDP 295

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
               KAW+ IC+VSR +FQK+YDRL +T L E GESFYQ  M  +V  L+K+ LLE DDGR
Sbjct: 296  AIHKAWQAICEVSRIEFQKVYDRLQITGLKEVGESFYQDKMNAVVDQLKKRDLLEFDDGR 355

Query: 774  KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLE 833
             IMW      IP+T+VK+ GG+TYDTSDL A+  R+ E K D ++YV D GQ +HFR + 
Sbjct: 356  YIMWAPGI-EIPLTVVKTGGGYTYDTSDLTALNYRVNEIKGDILIYVVDCGQELHFRQVF 414

Query: 834  ECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK 893
              A KAG  +  +TR++  GFGVVLGED+KKFKTRSG+TV+L +LLDEG++R+ D+L ++
Sbjct: 415  AAASKAGFYDAAQTRVEHAGFGVVLGEDKKKFKTRSGETVRLVDLLDEGIKRANDQLLER 474

Query: 894  NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTR 953
             R  ELT  E+ +A  AVAYGCIKYADL  NR  DYVFSFD+MLD RGNTA YLLY  TR
Sbjct: 475  GREKELTAQEMKDAADAVAYGCIKYADLKSNRKNDYVFSFDQMLDIRGNTAAYLLYQLTR 534

Query: 954  IASIART--AGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
            I S+ R     I  E++   A S    L   +EF LAKT+LR +++L    RDL +H +C
Sbjct: 535  IRSVNRKVEGKITDEEISKIATSGQFDLADPREFKLAKTILRFHEILSQAQRDLLIHPIC 594

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            E++YD+S AFS+FYD CY IEK  +GK + +  GRL+LA ATA VM+  F IL IRT
Sbjct: 595  EWMYDLSNAFSQFYDKCYIIEK-KDGK-EEIKVGRLILASATASVMEAAFKILGIRT 649



 Score =  365 bits (938), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 261/397 (65%), Gaps = 28/397 (7%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N+KLK++++ LQ+AIAEE              +   K + V +    S+ D L  +FT 
Sbjct: 33  ENSKLKYQISQLQKAIAEE--------------RTNLKPLEVEMS--ASILDSLVSLFTV 76

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A+  AFP +    A+V  T+ K   KFGD+QCN +M +  + KD GEK  P D+A+ I  
Sbjct: 77  AIAGAFPNVPFIKAAVNPTSPKQ-EKFGDYQCNSSMQIAGMLKDAGEKIAPRDVAKKILD 135

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-PPTLNKKLRV 216
            + S          +I +  +A PGF+NVF+ + Y   +I ++   GVQ   + ++  +V
Sbjct: 136 NIPSN--------NLIKETTIAGPGFINVFMCQKYMVNRIGELNNLGVQYDKSKSRGRKV 187

Query: 217 LVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD 276
           +VD+SSPNIAKEMHVGHLRSTIIGD+I+ L E  G++V+R+NHVGDWGTQFGMLIAHL D
Sbjct: 188 VVDYSSPNIAKEMHVGHLRSTIIGDSIANLFEAYGYEVLRINHVGDWGTQFGMLIAHLID 247

Query: 277 KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDV 336
            FPDY    P I+DLQ FYKESKKRFD++E FKKRAY+ VV LQ  DP   KAW+ IC+V
Sbjct: 248 LFPDYDKNVPRISDLQKFYKESKKRFDDEEDFKKRAYENVVKLQSHDPAIHKAWQAICEV 307

Query: 337 SRRDFQKIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIP 395
           SR +FQK+YDRL +T L E GESFYQ  M  +V  L+K+ LLE DDGR IMW      IP
Sbjct: 308 SRIEFQKVYDRLQITGLKEVGESFYQDKMNAVVDQLKKRDLLEFDDGRYIMWAPGI-EIP 366

Query: 396 MTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +T+VK+ GG+TYDTSDL A+  R+ E K D ++YV D
Sbjct: 367 LTVVKTGGGYTYDTSDLTALNYRVNEIKGDILIYVVD 403



 Score =  355 bits (912), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 238/349 (68%), Gaps = 12/349 (3%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+ D L  +FT A+  AFP +    A+V  T+ K   KFGD+QCN +M +  + KD GEK
Sbjct: 65   SILDSLVSLFTVAIAGAFPNVPFIKAAVNPTSPKQ-EKFGDYQCNSSMQIAGMLKDAGEK 123

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
              P D+A+ I   + S          +I +  +A PGF+NVF+ + Y   +I ++   GV
Sbjct: 124  IAPRDVAKKILDNIPSN--------NLIKETTIAGPGFINVFMCQKYMVNRIGELNNLGV 175

Query: 1223 Q-PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            Q   + ++  +V+VD+SSPNIAKEMHVGHLRSTIIGD+I+ L E  G++V+R+NHVGDWG
Sbjct: 176  QYDKSKSRGRKVVVDYSSPNIAKEMHVGHLRSTIIGDSIANLFEAYGYEVLRINHVGDWG 235

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHL D FPDY    P I+DLQ FYKESKKRFD++E FKKRAY+ VV LQ  DP
Sbjct: 236  TQFGMLIAHLIDLFPDYDKNVPRISDLQKFYKESKKRFDDEEDFKKRAYENVVKLQSHDP 295

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
               KAW+ IC+VSR +FQK+YDRL +T L E GESFYQ  M  +V  L+K+ LLE DDGR
Sbjct: 296  AIHKAWQAICEVSRIEFQKVYDRLQITGLKEVGESFYQDKMNAVVDQLKKRDLLEFDDGR 355

Query: 1401 KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             IMW      IP+T+VK+ GG+TYDTSDL A+  R+ E K D ++YV D
Sbjct: 356  YIMWAPGI-EIPLTVVKTGGGYTYDTSDLTALNYRVNEIKGDILIYVVD 403


>gi|149052278|gb|EDM04095.1| arginyl-tRNA synthetase (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 591

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 303/507 (59%), Positives = 386/507 (76%), Gaps = 13/507 (2%)

Query: 470 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
           P ++ +++   L ++F  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69  PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
           K K +K +P +IA++I    T  L  N    + ID++E+A PGF+NV L + +  EQ+ +
Sbjct: 126 KAKEQKVSPREIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFVSEQLTN 177

Query: 590 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
           ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G++V+RLNH
Sbjct: 178 LLVNGVQLPVLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNH 237

Query: 650 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
           VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY+CVV L
Sbjct: 238 VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYECVVLL 297

Query: 710 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
           Q  +PD  KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298 QSKNPDIMKAWNLICDVSREEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 770 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
           DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ  HF
Sbjct: 358 DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQATHF 416

Query: 830 RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
           + +   A+  G  +P  TR+  VGFGVVLGED+KKFKTRSG+TV+L +LL+EGLRRS+DK
Sbjct: 417 QTVFAAAQMIGWYDPKVTRVAHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLRRSMDK 476

Query: 890 LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
           LK+K R   LT  EL  AQ +VAYGCIKYADLSHNR  DYVFSFDKMLDDRGNTA YLLY
Sbjct: 477 LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLY 536

Query: 950 AYTRIA-SIARTAGINSEDLRVAAQST 975
           A+TRI+ SIAR A I+ E L+ AA+ T
Sbjct: 537 AFTRISTSIARLANIDEEMLQRAARET 563



 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/430 (50%), Positives = 302/430 (70%), Gaps = 34/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L    ++  S + + L  + +N KLK+RL IL+R++  E K+    
Sbjct: 15  QEKEIKSLTAEIDRLKNCSYLEASPSLEQL--REENLKLKYRLNILRRSLQAERKR---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L ++F  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K +P +IA++I    T  L  N    + ID++E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----EYIDRVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+ +++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTNLLVNGVQLPVLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAY+CVV LQ  +PD  KAW +ICDVSR +F KIYD L++TL ERGESFYQ  
Sbjct: 282 TEEEFKKRAYECVVLLQSKNPDIMKAWNLICDVSREEFNKIYDALDITLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH 433
           A+ I+YV D+
Sbjct: 401 ANKIIYVVDN 410



 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/354 (57%), Positives = 268/354 (75%), Gaps = 12/354 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L ++F  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA++I    T  L  N    + ID++E+A PGF+NV L + +  EQ+ +
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFVSEQLTN 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G++V+RLNH
Sbjct: 178  LLVNGVQLPVLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY+CVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYECVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW +ICDVSR +F KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410


>gi|402593822|gb|EJW87749.1| hypothetical protein WUBG_01338 [Wuchereria bancrofti]
          Length = 964

 Score =  614 bits (1584), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 298/533 (55%), Positives = 394/533 (73%), Gaps = 19/533 (3%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L  +F+ +V   +PE+   T  +  T  + V KFGD+Q N +M++ +     G+K +P +
Sbjct: 143  LRALFSESVSKLYPEMS--TIPILITEAQQV-KFGDYQFNSSMSIAQKLLRNGQKISPQE 199

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
            +A+ I       L   P   + I+K+EV+ PG++N+FL+R +    I +I + G++ P +
Sbjct: 200  VARKI-------LDNLPKCDR-IEKMEVSGPGYINIFLNRSWIATSITNIALKGIEVPVI 251

Query: 601  NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 660
             K+ R LVDFSSPNIAK+MHVGHLRSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGML
Sbjct: 252  EKR-RALVDFSSPNIAKQMHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGML 310

Query: 661  IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
            IAHLQD FP+++ + PPI+DLQAFYKESKKRFDEDE FK RAYQCV  LQ FDPD+ KAW
Sbjct: 311  IAHLQDCFPNFINEVPPISDLQAFYKESKKRFDEDEAFKARAYQCVTKLQSFDPDFVKAW 370

Query: 721  EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIM-WGE 779
            +MICDVSR+DF +IYDRL++T+ ERGESFYQKHM +LV   +K G+LELD+GRKI+  GE
Sbjct: 371  QMICDVSRKDFSQIYDRLDITIVERGESFYQKHMVELVDEFDKLGVLELDEGRKILKLGE 430

Query: 780  DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKA 839
                +P+T+VKSDGGFTYDTSDLAA++ R+  +KADWI+YV D GQ +HF LL    +K 
Sbjct: 431  ---GVPLTVVKSDGGFTYDTSDLAALKYRLFVDKADWIIYVVDAGQSLHFELLYAAGQKL 487

Query: 840  GILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTEL 899
            G  +P++ R++ V FG+VLGED+KKFKTRSGD+V+L++LLDEG++R+  KL++K R   +
Sbjct: 488  GWYSPSEKRVELVTFGLVLGEDKKKFKTRSGDSVRLTDLLDEGVKRAEAKLQEKERDKVM 547

Query: 900  TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR 959
             P EL  A+ AVAYGC+KYADLS  R  DYVFSFD+MLDDRGNTAVYLLYA+ RI SI R
Sbjct: 548  IPEELVLARDAVAYGCVKYADLSQTRTQDYVFSFDRMLDDRGNTAVYLLYAFARIQSICR 607

Query: 960  TAGINSEDLRVAAQSTP---VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
             +G++ ED+     S P   + LEH+ EF LAKT+L+  D ++    +  LH 
Sbjct: 608  NSGVSEEDIHNYLHSLPNGLLPLEHKSEFRLAKTILKFTDCILNTLDNFLLHQ 660



 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/445 (51%), Positives = 307/445 (68%), Gaps = 48/445 (10%)

Query: 21  KGFISESATE---DVLAAQLQNTKLKHRLAILQRAIAEEEK---KQGISSSI-------- 66
           KG ++++  E   D+  A ++NTKLK+R+ ILQ +I E+E+   K GI +S         
Sbjct: 41  KGDMNDTVLEHCPDLSKAIMENTKLKYRIKILQASIREQEQLNEKNGIKNSNAEAPMEKK 100

Query: 67  ----------SSQTKG------AAKKMN-VPVRD-RMSVRDYLSDVFTHAVQVAFPELGD 108
                     S ++ G       +KK N V V+D   S+   L  +F+ +V   +PE+  
Sbjct: 101 SKTKTSSKNDSDKSAGNKKPSKESKKYNYVIVKDFGSSLLCMLRALFSESVSKLYPEMS- 159

Query: 109 KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 168
            T  +  T  + V KFGD+Q N +M++ +     G+K +P ++A+ I       L   P 
Sbjct: 160 -TIPILITEAQQV-KFGDYQFNSSMSIAQKLLRNGQKISPQEVARKI-------LDNLPK 210

Query: 169 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 228
             + I+K+EV+ PG++N+FL+R +    I +I + G++ P + K+ R LVDFSSPNIAK+
Sbjct: 211 CDR-IEKMEVSGPGYINIFLNRSWIATSITNIALKGIEVPVIEKR-RALVDFSSPNIAKQ 268

Query: 229 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 288
           MHVGHLRSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGMLIAHLQD FP+++ + PPI
Sbjct: 269 MHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHLQDCFPNFINEVPPI 328

Query: 289 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 348
           +DLQAFYKESKKRFDEDE FK RAYQCV  LQ FDPD+ KAW+MICDVSR+DF +IYDRL
Sbjct: 329 SDLQAFYKESKKRFDEDEAFKARAYQCVTKLQSFDPDFVKAWQMICDVSRKDFSQIYDRL 388

Query: 349 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIM-WGEDRGSIPMTIVKSDGGFTY 407
           ++T+ ERGESFYQKHM +LV   +K G+LELD+GRKI+  GE    +P+T+VKSDGGFTY
Sbjct: 389 DITIVERGESFYQKHMVELVDEFDKLGVLELDEGRKILKLGE---GVPLTVVKSDGGFTY 445

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTD 432
           DTSDLAA++ R+  +KADWI+YV D
Sbjct: 446 DTSDLAALKYRLFVDKADWIIYVVD 470



 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/343 (57%), Positives = 259/343 (75%), Gaps = 16/343 (4%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L  +F+ +V   +PE+   T  +  T  + V KFGD+Q N +M++ +     G+K +P +
Sbjct: 143  LRALFSESVSKLYPEMS--TIPILITEAQQV-KFGDYQFNSSMSIAQKLLRNGQKISPQE 199

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
            +A+ I       L   P   + I+K+EV+ PG++N+FL+R +    I +I + G++ P +
Sbjct: 200  VARKI-------LDNLPKCDR-IEKMEVSGPGYINIFLNRSWIATSITNIALKGIEVPVI 251

Query: 1228 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 1287
             K+ R LVDFSSPNIAK+MHVGHLRSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGML
Sbjct: 252  EKR-RALVDFSSPNIAKQMHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGML 310

Query: 1288 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            IAHLQD FP+++ + PPI+DLQAFYKESKKRFDEDE FK RAYQCV  LQ FDPD+ KAW
Sbjct: 311  IAHLQDCFPNFINEVPPISDLQAFYKESKKRFDEDEAFKARAYQCVTKLQSFDPDFVKAW 370

Query: 1348 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIM-WGE 1406
            +MICDVSR+DF +IYDRL++T+ ERGESFYQKHM +LV   +K G+LELD+GRKI+  GE
Sbjct: 371  QMICDVSRKDFSQIYDRLDITIVERGESFYQKHMVELVDEFDKLGVLELDEGRKILKLGE 430

Query: 1407 DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
                +P+T+VKSDGGFTYDTSDLAA++ R+  +KADWI+YV D
Sbjct: 431  ---GVPLTVVKSDGGFTYDTSDLAALKYRLFVDKADWIIYVVD 470


>gi|349805633|gb|AEQ18289.1| putative arginyl-trna cytoplasmic [Hymenochirus curtipes]
          Length = 560

 Score =  613 bits (1581), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 311/597 (52%), Positives = 407/597 (68%), Gaps = 66/597 (11%)

Query: 472  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            +  +++   L ++F  A++ A+PEL +   +V  + +    KFGD+QCN AMA+ ++ K 
Sbjct: 26   KSMININSQLQEIFGTAIRAAYPELQNAPLAVTPSQQP---KFGDYQCNSAMAMTQMLKT 82

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
              +K +P  IA   A                          F+NV L + +  +Q+  ++
Sbjct: 83   MDKKVSPRGIALVQA--------------------------FINVHLHKDFISKQLSKLL 116

Query: 592  VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
            VNGVQP    +K +V+VDFSSPNIAKEMHVGHLRSTIIGD+I RL E++GHDV+RLNH+G
Sbjct: 117  VNGVQPIVEERK-KVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFVGHDVLRLNHLG 175

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIAHLQDKFPDY                               YQCVV LQ 
Sbjct: 176  DWGTQFGMLIAHLQDKFPDY-------------------------------YQCVVQLQN 204

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             +PD   AW +IC+VSR++FQKIYD L++++ +RGESFYQ  M Q+V   E KGL+E+D+
Sbjct: 205  KNPDIITAWNLICEVSRKEFQKIYDCLDISIIDRGESFYQDRMVQVVKEFESKGLVEVDE 264

Query: 772  GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            GRKI++     ++P+TI KSDGGFTYDTSDLAA++QR++EEKAD I+YV D GQ +H + 
Sbjct: 265  GRKIVFAPG-CTVPLTIQKSDGGFTYDTSDLAALKQRLQEEKADMIIYVIDSGQSIHMQT 323

Query: 832  LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
            +       G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LL+EGL+RS++KL 
Sbjct: 324  IFAAGHMIGWYDPKVTRIEHAGFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMEKLN 383

Query: 892  DKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
            +K R   LTP EL+ AQ +VA+GCIKYADLSHNR  DY+FSFDKMLDDRGNTA YLLYAY
Sbjct: 384  EKGRDKVLTPEELTAAQTSVAFGCIKYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYAY 443

Query: 952  TRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
            TRI SIAR A I+ E+L  AA+     L+HEKE+ LA+ +LR  ++L     DL LH LC
Sbjct: 444  TRIRSIARLANISDEELHKAAKEI---LDHEKEWKLARCILRFPEILQKNLEDLLLHTLC 500

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            +YLY+++T F+EFYDNCYC+EKD + G+I  V+  RLLL +ATA VM K FDIL I+
Sbjct: 501  DYLYELATIFTEFYDNCYCVEKDRQTGQIVKVNMSRLLLCDATAAVMAKGFDILGIK 557



 Score =  337 bits (865), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 180/395 (45%), Positives = 246/395 (62%), Gaps = 82/395 (20%)

Query: 38  QNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTH 97
           +N KLK+RL IL++++ EE+KK             ++K M       +++   L ++F  
Sbjct: 2   ENAKLKYRLNILRKSLLEEKKK-------------SSKSM-------ININSQLQEIFGT 41

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           A++ A+PEL +   +V  + +    KFGD+QCN AMA+ ++ K   +K +P  IA   A 
Sbjct: 42  AIRAAYPELQNAPLAVTPSQQP---KFGDYQCNSAMAMTQMLKTMDKKVSPRGIALVQA- 97

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVL 217
                                    F+NV L + +  +Q+  ++VNGVQP    +K +V+
Sbjct: 98  -------------------------FINVHLHKDFISKQLSKLLVNGVQPIVEERK-KVV 131

Query: 218 VDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDK 277
           VDFSSPNIAKEMHVGHLRSTIIGD+I RL E++GHDV+RLNH+GDWGTQFGMLIAHLQDK
Sbjct: 132 VDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFVGHDVLRLNHLGDWGTQFGMLIAHLQDK 191

Query: 278 FPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           FPDY                               YQCVV LQ  +PD   AW +IC+VS
Sbjct: 192 FPDY-------------------------------YQCVVQLQNKNPDIITAWNLICEVS 220

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 397
           R++FQKIYD L++++ +RGESFYQ  M Q+V   E KGL+E+D+GRKI++     ++P+T
Sbjct: 221 RKEFQKIYDCLDISIIDRGESFYQDRMVQVVKEFESKGLVEVDEGRKIVFAPG-CTVPLT 279

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           I KSDGGFTYDTSDLAA++QR++EEKAD I+YV D
Sbjct: 280 IQKSDGGFTYDTSDLAALKQRLQEEKADMIIYVID 314



 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 170/371 (45%), Positives = 232/371 (62%), Gaps = 69/371 (18%)

Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
            +  S+  + K ++K M       +++   L ++F  A++ A+PEL +   +V  + +   
Sbjct: 13   LRKSLLEEKKKSSKSM-------ININSQLQEIFGTAIRAAYPELQNAPLAVTPSQQP-- 63

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             KFGD+QCN AMA+ ++ K   +K +P  IA   A                         
Sbjct: 64   -KFGDYQCNSAMAMTQMLKTMDKKVSPRGIALVQA------------------------- 97

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
             F+NV L + +  +Q+  ++VNGVQP    +K +V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 98   -FINVHLHKDFISKQLSKLLVNGVQPIVEERK-KVVVDFSSPNIAKEMHVGHLRSTIIGD 155

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +I RL E++GHDV+RLNH+GDWGTQFGMLIAHLQDKFPDY                    
Sbjct: 156  SICRLFEFVGHDVLRLNHLGDWGTQFGMLIAHLQDKFPDY-------------------- 195

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 1378
                       YQCVV LQ  +PD   AW +IC+VSR++FQKIYD L++++ +RGESFYQ
Sbjct: 196  -----------YQCVVQLQNKNPDIITAWNLICEVSRKEFQKIYDCLDISIIDRGESFYQ 244

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 1438
              M Q+V   E KGL+E+D+GRKI++     ++P+TI KSDGGFTYDTSDLAA++QR++E
Sbjct: 245  DRMVQVVKEFESKGLVEVDEGRKIVFAPG-CTVPLTIQKSDGGFTYDTSDLAALKQRLQE 303

Query: 1439 EKADWIVYVTD 1449
            EKAD I+YV D
Sbjct: 304  EKADMIIYVID 314


>gi|353228888|emb|CCD75059.1| putative arginyl-tRNA synthetase [Schistosoma mansoni]
          Length = 622

 Score =  604 bits (1557), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 306/631 (48%), Positives = 429/631 (67%), Gaps = 28/631 (4%)

Query: 442  AIAEEEKKQGISSSSSSQTKGTAKKMNVPVR-DRMSVRDYLSDVFTHAVQVAFPELGDKT 500
            AI       G++  +S   K   K++N  V+ + +S++  L+ +F +A++  F  +  K 
Sbjct: 14   AIYNYIHSMGLTGYASICFKEYLKQLNDHVQYNSISIQAALAALFDYAIKTVF--INTKH 71

Query: 501  ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 560
            +   S   K    FGD+QCN A++   I K+    +NPFDIA+SI + +         + 
Sbjct: 72   SVQLSVPTK--RSFGDYQCNSALS---IRKESNNDQNPFDIAKSIVAAL--------PVN 118

Query: 561  KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
             +I+K++V  PGF+N+++ + +   +++ I+++GV PP +  K  V+VD SSPNIAKEMH
Sbjct: 119  DLIEKVDVVPPGFINIWIKQRFISNEVRKILLHGVTPPFIPHKYSVIVDMSSPNIAKEMH 178

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
            VGHLRSTIIG++ISRLL +LGH V++LNH+GDWGTQFGMLIAHL++ +PD+ T +PPI+D
Sbjct: 179  VGHLRSTIIGESISRLLSFLGHKVLKLNHLGDWGTQFGMLIAHLKEIYPDHKT-APPISD 237

Query: 681  LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 740
            LQAFYK SK R+DE++ F +RA+  VV LQ+ DP+Y  AW+ ICD+SR++F  +Y RL +
Sbjct: 238  LQAFYKTSKTRYDEEKDFNQRAHMAVVKLQQNDPEYVHAWKQICDISRKEFDDVYHRLGI 297

Query: 741  -TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 799
              L ERGESFYQ  ME+ V  L+ + +L+ D+GR I+W   +  +P+T+VKSDGGFTYDT
Sbjct: 298  ENLIERGESFYQSRMEEFVNDLKSQNVLQEDEGRLILW-PPKCEVPLTVVKSDGGFTYDT 356

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            SDL A+ QR+ EEKADW++YV D+GQ VH   +   A+  G  NPN  ++  +GFGVVLG
Sbjct: 357  SDLTALLQRLHEEKADWVLYVVDMGQSVHLNTVFAGAEMLGYYNPNVHKVQHIGFGVVLG 416

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            ED+KKFKTRSGDTV+L +LLDEGL R+ ++L +K R+ ELT  E   AQ+AVAYGCIKYA
Sbjct: 417  EDKKKFKTRSGDTVRLVDLLDEGLERAKNRLLEKERNKELTEAEFERAQKAVAYGCIKYA 476

Query: 920  DLSHNRNLDYVFSFDK-MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            DLSH+R +DYVFSFD+  L     TAVYL        SI R AG + + +   +++ P+ 
Sbjct: 477  DLSHSRTIDYVFSFDRETLLFTCYTAVYL--------SIIRNAGYSEKTINEISKTVPLI 528

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
             EH  E  LAK L R+ D+L+ +  D  LH LC+YLYD+S  F+ FYD CYCIE++ E  
Sbjct: 529  FEHPMELTLAKALCRLPDILLKIQNDFLLHSLCDYLYDLSCDFTNFYDACYCIERNQETG 588

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRTA 1069
               ++  R++L EATA+VMK  FDIL I T 
Sbjct: 589  DVQINKERIVLCEATARVMKCGFDILGIETV 619



 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 182/387 (47%), Positives = 266/387 (68%), Gaps = 19/387 (4%)

Query: 1065 NIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVR-DRMSVRDYLSDVFTHAVQVAFPEL 1123
            N  +AI       G++   S   K   K++N  V+ + +S++  L+ +F +A++  F  +
Sbjct: 10   NRESAIYNYIHSMGLTGYASICFKEYLKQLNDHVQYNSISIQAALAALFDYAIKTVF--I 67

Query: 1124 GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATN 1183
              K +   S   K    FGD+QCN A++   I K+    +NPFDIA+SI + +       
Sbjct: 68   NTKHSVQLSVPTK--RSFGDYQCNSALS---IRKESNNDQNPFDIAKSIVAAL------- 115

Query: 1184 PSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIA 1243
              +  +I+K++V  PGF+N+++ + +   +++ I+++GV PP +  K  V+VD SSPNIA
Sbjct: 116  -PVNDLIEKVDVVPPGFINIWIKQRFISNEVRKILLHGVTPPFIPHKYSVIVDMSSPNIA 174

Query: 1244 KEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP 1303
            KEMHVGHLRSTIIG++ISRLL +LGH V++LNH+GDWGTQFGMLIAHL++ +PD+ T +P
Sbjct: 175  KEMHVGHLRSTIIGESISRLLSFLGHKVLKLNHLGDWGTQFGMLIAHLKEIYPDHKT-AP 233

Query: 1304 PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYD 1363
            PI+DLQAFYK SK R+DE++ F +RA+  VV LQ+ DP+Y  AW+ ICD+SR++F  +Y 
Sbjct: 234  PISDLQAFYKTSKTRYDEEKDFNQRAHMAVVKLQQNDPEYVHAWKQICDISRKEFDDVYH 293

Query: 1364 RLNV-TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 1422
            RL +  L ERGESFYQ  ME+ V  L+ + +L+ D+GR I+W   +  +P+T+VKSDGGF
Sbjct: 294  RLGIENLIERGESFYQSRMEEFVNDLKSQNVLQEDEGRLILW-PPKCEVPLTVVKSDGGF 352

Query: 1423 TYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            TYDTSDL A+ QR+ EEKADW++YV D
Sbjct: 353  TYDTSDLTALLQRLHEEKADWVLYVVD 379



 Score =  363 bits (931), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 181/385 (47%), Positives = 265/385 (68%), Gaps = 19/385 (4%)

Query: 50  QRAIAEEEKKQGISSSISSQTKGAAKKMNVPVR-DRMSVRDYLSDVFTHAVQVAFPELGD 108
           + AI       G++   S   K   K++N  V+ + +S++  L+ +F +A++  F  +  
Sbjct: 12  ESAIYNYIHSMGLTGYASICFKEYLKQLNDHVQYNSISIQAALAALFDYAIKTVF--INT 69

Query: 109 KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 168
           K +   S   K    FGD+QCN A++   I K+    +NPFDIA+SI + +         
Sbjct: 70  KHSVQLSVPTK--RSFGDYQCNSALS---IRKESNNDQNPFDIAKSIVAAL--------P 116

Query: 169 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 228
           +  +I+K++V  PGF+N+++ + +   +++ I+++GV PP +  K  V+VD SSPNIAKE
Sbjct: 117 VNDLIEKVDVVPPGFINIWIKQRFISNEVRKILLHGVTPPFIPHKYSVIVDMSSPNIAKE 176

Query: 229 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 288
           MHVGHLRSTIIG++ISRLL +LGH V++LNH+GDWGTQFGMLIAHL++ +PD+ T +PPI
Sbjct: 177 MHVGHLRSTIIGESISRLLSFLGHKVLKLNHLGDWGTQFGMLIAHLKEIYPDHKT-APPI 235

Query: 289 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 348
           +DLQAFYK SK R+DE++ F +RA+  VV LQ+ DP+Y  AW+ ICD+SR++F  +Y RL
Sbjct: 236 SDLQAFYKTSKTRYDEEKDFNQRAHMAVVKLQQNDPEYVHAWKQICDISRKEFDDVYHRL 295

Query: 349 NV-TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTY 407
            +  L ERGESFYQ  ME+ V  L+ + +L+ D+GR I+W   +  +P+T+VKSDGGFTY
Sbjct: 296 GIENLIERGESFYQSRMEEFVNDLKSQNVLQEDEGRLILW-PPKCEVPLTVVKSDGGFTY 354

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTD 432
           DTSDL A+ QR+ EEKADW++YV D
Sbjct: 355 DTSDLTALLQRLHEEKADWVLYVVD 379


>gi|268574474|ref|XP_002642214.1| C. briggsae CBR-RRT-1 protein [Caenorhabditis briggsae]
          Length = 710

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 323/633 (51%), Positives = 423/633 (66%), Gaps = 33/633 (5%)

Query: 447  EKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDK 499
            EKK      +       AKK+     D ++V DY       L  +F  A++ AFP L D 
Sbjct: 94   EKKAKKDGKNGGAAPKQAKKV-----DYVTVNDYGSSIFGRLQSLFKKAIEDAFPGL-DV 147

Query: 500  TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 559
               +A T      +FGD+QCN AM +  I K  G  K P D+ + I        A  P  
Sbjct: 148  PLLLAETPNP---QFGDYQCNSAMPIAAILKATGINKKPGDVGKEIH-------AKLPEN 197

Query: 560  AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEM 619
               ++KI V   GF+NVFL+  Y  +QI  + +NG+  P + KK RVLVDFSSPNIAKEM
Sbjct: 198  IDFVEKIAVMPAGFINVFLNADYLRKQISSLALNGISLPKVAKK-RVLVDFSSPNIAKEM 256

Query: 620  HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 679
            HVGHLRSTIIGD+I RL E +G+DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+
Sbjct: 257  HVGHLRSTIIGDSICRLFEAVGYDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDIS 316

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DLQAFYKESKKRFDEDE FKKRAY+CVV LQ  D +  +AW  ICDVS++  Q +YD L+
Sbjct: 317  DLQAFYKESKKRFDEDEQFKKRAYECVVKLQSRDGEIVQAWNTICDVSKKYNQIVYDHLD 376

Query: 740  VTLTERGESFYQKHMEQLVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGF 795
            + + + GESFYQ  M +LV +++  K  +L  ++GR+IM+  G D   +P+T+VKSDGGF
Sbjct: 377  IKIKDVGESFYQDKMVELVKWIKENKPDMLRKEEGRQIMFPTGCD---VPLTVVKSDGGF 433

Query: 796  TYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFG 855
            TYDTSDLAA++ R+ EEK DW +YV D GQ +H   +    +  G  + N  R++ VGFG
Sbjct: 434  TYDTSDLAALKYRMLEEKCDWNIYVVDAGQNLHLETVYAAGRDFGWYDENTQRVEHVGFG 493

Query: 856  VVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGC 915
            +VLG+D+KKFKTRSG+TV+L +LL EG++R+ +KLK+K R   +T  EL+ A+ AVA+GC
Sbjct: 494  LVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLKEKGRDAVMTEEELAAARDAVAFGC 553

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
            +KYADLSH R  DY+FSFD+MLDDRGNTAVYLLYAY RI SI RT+G+    L      T
Sbjct: 554  VKYADLSHTRTQDYIFSFDRMLDDRGNTAVYLLYAYARIRSIVRTSGVTDSQLADYLAKT 613

Query: 976  PV-SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKD 1034
            P+  L H  E  LAK LL+++D ++LV   L LH +C+Y+Y+++T F +FY+ CY IE+ 
Sbjct: 614  PILPLNHPAELKLAKQLLKLSDCVLLVLDSLMLHQMCDYVYNLATLFHDFYNECYVIER- 672

Query: 1035 AEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
             EG+   VH  RL L E TA V+  CF IL IR
Sbjct: 673  KEGEPVVVHFHRLALCEVTANVISTCFKILGIR 705



 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/427 (49%), Positives = 275/427 (64%), Gaps = 45/427 (10%)

Query: 35  AQLQNTKLKHRLAILQRAIAEE---EKKQGISSSIS---------------SQTKGAAKK 76
           A+  N KLK+R  IL+R+IAE+    KK G+ +S                  +  GAA K
Sbjct: 50  AKKLNDKLKYRKTILERSIAEQFAKNKKNGVKASEPSASSSAPVEKKAKKDGKNGGAAPK 109

Query: 77  MNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQC 129
               V D ++V DY       L  +F  A++ AFP L D    +A T      +FGD+QC
Sbjct: 110 QAKKV-DYVTVNDYGSSIFGRLQSLFKKAIEDAFPGL-DVPLLLAETPNP---QFGDYQC 164

Query: 130 NDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLS 189
           N AM +  I K  G  K P D+ + I        A  P     ++KI V   GF+NVFL+
Sbjct: 165 NSAMPIAAILKATGINKKPGDVGKEIH-------AKLPENIDFVEKIAVMPAGFINVFLN 217

Query: 190 RVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 249
             Y  +QI  + +NG+  P + KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL E 
Sbjct: 218 ADYLRKQISSLALNGISLPKVAKK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEA 276

Query: 250 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFK 309
           +G+DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKKRFDEDE FK
Sbjct: 277 VGYDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDISDLQAFYKESKKRFDEDEQFK 336

Query: 310 KRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVP 369
           KRAY+CVV LQ  D +  +AW  ICDVS++  Q +YD L++ + + GESFYQ  M +LV 
Sbjct: 337 KRAYECVVKLQSRDGEIVQAWNTICDVSKKYNQIVYDHLDIKIKDVGESFYQDKMVELVK 396

Query: 370 YLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 425
           +++  K  +L  ++GR+IM+  G D   +P+T+VKSDGGFTYDTSDLAA++ R+ EEK D
Sbjct: 397 WIKENKPDMLRKEEGRQIMFPTGCD---VPLTVVKSDGGFTYDTSDLAALKYRMLEEKCD 453

Query: 426 WIVYVTD 432
           W +YV D
Sbjct: 454 WNIYVVD 460



 Score =  362 bits (928), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 196/372 (52%), Positives = 251/372 (67%), Gaps = 27/372 (7%)

Query: 1089 GAAKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKF 1141
            GAA K    V D ++V DY       L  +F  A++ AFP L D    +A T      +F
Sbjct: 105  GAAPKQAKKV-DYVTVNDYGSSIFGRLQSLFKKAIEDAFPGL-DVPLLLAETPNP---QF 159

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD+QCN AM +  I K  G  K P D+ + I        A  P     ++KI V   GF+
Sbjct: 160  GDYQCNSAMPIAAILKATGINKKPGDVGKEIH-------AKLPENIDFVEKIAVMPAGFI 212

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            NVFL+  Y  +QI  + +NG+  P + KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I 
Sbjct: 213  NVFLNADYLRKQISSLALNGISLPKVAKK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSIC 271

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            RL E +G+DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKKRFDE
Sbjct: 272  RLFEAVGYDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDISDLQAFYKESKKRFDE 331

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 1381
            DE FKKRAY+CVV LQ  D +  +AW  ICDVS++  Q +YD L++ + + GESFYQ  M
Sbjct: 332  DEQFKKRAYECVVKLQSRDGEIVQAWNTICDVSKKYNQIVYDHLDIKIKDVGESFYQDKM 391

Query: 1382 EQLVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 1437
             +LV +++  K  +L  ++GR+IM+  G D   +P+T+VKSDGGFTYDTSDLAA++ R+ 
Sbjct: 392  VELVKWIKENKPDMLRKEEGRQIMFPTGCD---VPLTVVKSDGGFTYDTSDLAALKYRML 448

Query: 1438 EEKADWIVYVTD 1449
            EEK DW +YV D
Sbjct: 449  EEKCDWNIYVVD 460


>gi|194378726|dbj|BAG63528.1| unnamed protein product [Homo sapiens]
          Length = 454

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 293/450 (65%), Positives = 357/450 (79%), Gaps = 2/450 (0%)

Query: 619  MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 678
            MHVGHLRSTIIG++ISRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI
Sbjct: 1    MHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 679  ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 738
             DLQ FYKESKKRFD +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L
Sbjct: 61   GDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDAL 120

Query: 739  NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 798
            +V+L ERGESFYQ  M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYD
Sbjct: 121  DVSLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYD 179

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            TSDLAAI+QR+ EEKAD I+YV D GQ VHF+ +   A+  G  +P  TR+   GFGVVL
Sbjct: 180  TSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVL 239

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            GED+KKFKTRSG+TV+L +LL EGL+RS+DKLK+K R   LT  EL+ AQ +VAYGCIKY
Sbjct: 240  GEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKY 299

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLSHNR  DY+FSFDKMLDDRGNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + 
Sbjct: 300  ADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKIL 359

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-G 1037
            L+HEKE+ L + +LR  ++L  +  DL LH LC+Y+Y+++TAF+EFYD+CYC+EKD + G
Sbjct: 360  LDHEKEWNLGRCILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQTG 419

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            KI  V+  R+LL EA A VM K FDIL I+
Sbjct: 420  KILKVNMWRMLLCEAVAAVMAKGFDILGIK 449



 Score =  309 bits (792), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 151/219 (68%), Positives = 180/219 (82%), Gaps = 3/219 (1%)

Query: 229 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 288
           MHVGHLRSTIIG++ISRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI
Sbjct: 1   MHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 289 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 348
            DLQ FYKESKKRFD +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L
Sbjct: 61  GDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDAL 120

Query: 349 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 408
           +V+L ERGESFYQ  M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYD
Sbjct: 121 DVSLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYD 179

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQAIAE 445
           TSDLAAI+QR+ EEKAD I+YV D+ +S H Q + A A+
Sbjct: 180 TSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQ 218



 Score =  309 bits (791), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 146/205 (71%), Positives = 172/205 (83%), Gaps = 1/205 (0%)

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRSTIIG++ISRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI
Sbjct: 1    MHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
             DLQ FYKESKKRFD +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++  KIYD L
Sbjct: 61   GDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDAL 120

Query: 1366 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 1425
            +V+L ERGESFYQ  M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYD
Sbjct: 121  DVSLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYD 179

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDH 1450
            TSDLAAI+QR+ EEKAD I+YV D+
Sbjct: 180  TSDLAAIKQRLFEEKADMIIYVVDN 204


>gi|67970581|dbj|BAE01633.1| unnamed protein product [Macaca fascicularis]
          Length = 454

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 289/450 (64%), Positives = 357/450 (79%), Gaps = 2/450 (0%)

Query: 619  MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 678
            MHVGHLRSTIIG+++SRL E+ G+DV+RLN VGDWGTQFGMLIAHLQDKFPDYLT SPPI
Sbjct: 1    MHVGHLRSTIIGESVSRLFEFAGYDVLRLNRVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 679  ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 738
             DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L
Sbjct: 61   GDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDAL 120

Query: 739  NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 798
            +V+L ERGESFYQ  M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYD
Sbjct: 121  DVSLIERGESFYQDRMNDIVQEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYD 179

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            TSDLAAI+QR+ EEKAD I+YV D GQ VHF+ +   A+  G  +P  TR+   GFGVVL
Sbjct: 180  TSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVL 239

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            GED+KKFKTR+G+TV+L +L+ EGL+RS+DKLK+K R   LT  EL+ AQ ++AYGCIKY
Sbjct: 240  GEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCIKY 299

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLSHNR  DY+FSFDKMLDDRGNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + 
Sbjct: 300  ADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKIL 359

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-G 1037
            L+HEKE+ L + +LR  ++L  +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + G
Sbjct: 360  LDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTG 419

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            KI  V+  R+LL EA A VM K FDIL I+
Sbjct: 420  KILKVNMWRMLLCEAVAAVMAKGFDILGIK 449



 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/204 (71%), Positives = 172/204 (84%), Gaps = 1/204 (0%)

Query: 229 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 288
           MHVGHLRSTIIG+++SRL E+ G+DV+RLN VGDWGTQFGMLIAHLQDKFPDYLT SPPI
Sbjct: 1   MHVGHLRSTIIGESVSRLFEFAGYDVLRLNRVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 289 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 348
            DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L
Sbjct: 61  GDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDAL 120

Query: 349 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 408
           +V+L ERGESFYQ  M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYD
Sbjct: 121 DVSLIERGESFYQDRMNDIVQEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYD 179

Query: 409 TSDLAAIRQRIEEEKADWIVYVTD 432
           TSDLAAI+QR+ EEKAD I+YV D
Sbjct: 180 TSDLAAIKQRLSEEKADMIIYVVD 203



 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/204 (71%), Positives = 172/204 (84%), Gaps = 1/204 (0%)

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRSTIIG+++SRL E+ G+DV+RLN VGDWGTQFGMLIAHLQDKFPDYLT SPPI
Sbjct: 1    MHVGHLRSTIIGESVSRLFEFAGYDVLRLNRVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
             DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L
Sbjct: 61   GDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQEFNKIYDAL 120

Query: 1366 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 1425
            +V+L ERGESFYQ  M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYD
Sbjct: 121  DVSLIERGESFYQDRMNDIVQEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYD 179

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTD 1449
            TSDLAAI+QR+ EEKAD I+YV D
Sbjct: 180  TSDLAAIKQRLSEEKADMIIYVVD 203


>gi|393909968|gb|EFO27684.2| arginyl-tRNA synthetase [Loa loa]
          Length = 583

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 288/519 (55%), Positives = 379/519 (73%), Gaps = 17/519 (3%)

Query: 484 VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 543
           +F  +V   +PE+      +  T +    KFGD+Q N +M++ +     G+K +P ++A+
Sbjct: 49  LFLESVSKLYPEMSTIPILITETQQA---KFGDYQFNSSMSIAQKLGRNGQKISPQEVAR 105

Query: 544 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKK 603
            I          N      I+K+EVA PG++N+FL++ +    I +I + G++ P + K+
Sbjct: 106 RIMD--------NLPKCDRIEKMEVAGPGYINIFLNKNWIAASIANIALKGIEIPVIEKR 157

Query: 604 LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAH 663
            RV+VDFSSPNIAK+MHVGHLRSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGMLIAH
Sbjct: 158 -RVVVDFSSPNIAKQMHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAH 216

Query: 664 LQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMI 723
           LQD FP+++ + PPI+DLQ FYKESKKRFDEDE FK RAYQCV  LQ FDPDY KAW+MI
Sbjct: 217 LQDCFPNFINEVPPISDLQTFYKESKKRFDEDEAFKARAYQCVTKLQSFDPDYVKAWQMI 276

Query: 724 CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 783
           CDVSR+DF +IYDRL +T+ ERGESFYQKHM +LV  L+K G+LELD+GRKI+     G 
Sbjct: 277 CDVSRKDFNQIYDRLGITIVERGESFYQKHMIELVEELDKLGVLELDEGRKIL--RVGGR 334

Query: 784 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILN 843
           +P+T+VKSDG FTYDTSDLA ++ R+  +KADWI+YV D GQ +HF L+    +K G  +
Sbjct: 335 VPLTVVKSDGAFTYDTSDLATLKYRLFVDKADWIIYVVDAGQSLHFELVYAAGQKLGWYS 394

Query: 844 PNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE 903
             + R++FV  G+VLGED+KKFKTRSGDTV+L++LLDEG++R+  KL++K R   +   E
Sbjct: 395 QTEKRVEFVSLGLVLGEDKKKFKTRSGDTVRLTDLLDEGVKRAEIKLQEKERDKVMISEE 454

Query: 904 LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGI 963
           L+ A+ AVAYGC+KYADLS  R  DYVFSFD+MLDDRGNTAVYLLYA+ RI SI R  G+
Sbjct: 455 LTLARDAVAYGCVKYADLSQTRTQDYVFSFDRMLDDRGNTAVYLLYAFARIKSICRNTGV 514

Query: 964 NSEDLRVAAQSTP---VSLEHEKEFALAKTLLRMNDVLM 999
           + ED+     S P   + LEH+ EF LAKT+L+  D ++
Sbjct: 515 SDEDIHNYLCSLPNGVLPLEHKSEFRLAKTILKFTDSIL 553



 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/339 (56%), Positives = 250/339 (73%), Gaps = 14/339 (4%)

Query: 94  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 153
           +F  +V   +PE+      +  T +    KFGD+Q N +M++ +     G+K +P ++A+
Sbjct: 49  LFLESVSKLYPEMSTIPILITETQQA---KFGDYQFNSSMSIAQKLGRNGQKISPQEVAR 105

Query: 154 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKK 213
            I          N      I+K+EVA PG++N+FL++ +    I +I + G++ P + K+
Sbjct: 106 RIMD--------NLPKCDRIEKMEVAGPGYINIFLNKNWIAASIANIALKGIEIPVIEKR 157

Query: 214 LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAH 273
            RV+VDFSSPNIAK+MHVGHLRSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGMLIAH
Sbjct: 158 -RVVVDFSSPNIAKQMHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAH 216

Query: 274 LQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMI 333
           LQD FP+++ + PPI+DLQ FYKESKKRFDEDE FK RAYQCV  LQ FDPDY KAW+MI
Sbjct: 217 LQDCFPNFINEVPPISDLQTFYKESKKRFDEDEAFKARAYQCVTKLQSFDPDYVKAWQMI 276

Query: 334 CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 393
           CDVSR+DF +IYDRL +T+ ERGESFYQKHM +LV  L+K G+LELD+GRKI+     G 
Sbjct: 277 CDVSRKDFNQIYDRLGITIVERGESFYQKHMIELVEELDKLGVLELDEGRKIL--RVGGR 334

Query: 394 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +P+T+VKSDG FTYDTSDLA ++ R+  +KADWI+YV D
Sbjct: 335 VPLTVVKSDGAFTYDTSDLATLKYRLFVDKADWIIYVVD 373



 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/339 (56%), Positives = 250/339 (73%), Gaps = 14/339 (4%)

Query: 1111 VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 1170
            +F  +V   +PE+      +  T +    KFGD+Q N +M++ +     G+K +P ++A+
Sbjct: 49   LFLESVSKLYPEMSTIPILITETQQA---KFGDYQFNSSMSIAQKLGRNGQKISPQEVAR 105

Query: 1171 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKK 1230
             I          N      I+K+EVA PG++N+FL++ +    I +I + G++ P + K+
Sbjct: 106  RIMD--------NLPKCDRIEKMEVAGPGYINIFLNKNWIAASIANIALKGIEIPVIEKR 157

Query: 1231 LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAH 1290
             RV+VDFSSPNIAK+MHVGHLRSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGMLIAH
Sbjct: 158  -RVVVDFSSPNIAKQMHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAH 216

Query: 1291 LQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMI 1350
            LQD FP+++ + PPI+DLQ FYKESKKRFDEDE FK RAYQCV  LQ FDPDY KAW+MI
Sbjct: 217  LQDCFPNFINEVPPISDLQTFYKESKKRFDEDEAFKARAYQCVTKLQSFDPDYVKAWQMI 276

Query: 1351 CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 1410
            CDVSR+DF +IYDRL +T+ ERGESFYQKHM +LV  L+K G+LELD+GRKI+     G 
Sbjct: 277  CDVSRKDFNQIYDRLGITIVERGESFYQKHMIELVEELDKLGVLELDEGRKIL--RVGGR 334

Query: 1411 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +P+T+VKSDG FTYDTSDLA ++ R+  +KADWI+YV D
Sbjct: 335  VPLTVVKSDGAFTYDTSDLATLKYRLFVDKADWIIYVVD 373


>gi|341896084|gb|EGT52019.1| CBN-RARS-1 protein [Caenorhabditis brenneri]
          Length = 711

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 322/649 (49%), Positives = 426/649 (65%), Gaps = 39/649 (6%)

Query: 444  AEEEKKQGISSSSSSQTKGTA----KKMN-------VPVR----DRMSVRDY-------L 481
            A + KK G+ +S+ + +K TA    K  N        P +    D ++V D+       L
Sbjct: 72   AAKNKKNGVKASAPTDSKSTAPADKKAKNDGKTGGAAPKQSKKVDYVTVEDFGSSILGRL 131

Query: 482  SDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDI 541
              +F  A+  AFP L D    +A T      +FGD+QC  AM +    K  G  K P D+
Sbjct: 132  QKLFKTAIADAFPGL-DLPLLLAETPNP---QFGDYQCTSAMPIAAKLKSTGVNKKPGDV 187

Query: 542  AQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN 601
            A+ I        A  P+    I+K+ V   GF+N+FL++ Y  +QI  +   G+  P + 
Sbjct: 188  AKEIE-------AKLPTNVDFIEKVNVLPAGFMNIFLNKDYICKQISQLASKGITLPKVA 240

Query: 602  KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 661
            KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL E +G DV+R+NH+GDWGTQFGMLI
Sbjct: 241  KK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVGFDVLRVNHIGDWGTQFGMLI 299

Query: 662  AHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWE 721
            AHL D+FPD+L K P IADLQAFYKESKKRFDEDE+FKKRAY+CVV LQ  + +  KAW 
Sbjct: 300  AHLYDRFPDFLKKLPDIADLQAFYKESKKRFDEDEVFKKRAYECVVKLQSHEEEIVKAWN 359

Query: 722  MICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE--KKGLLELDDGRKIMWGE 779
             ICDVS++  Q +YD L++ + + GESFYQ  M +L+ +++  K  ++  ++GR IM+  
Sbjct: 360  TICDVSKKYNQIVYDHLDIKIKDVGESFYQDKMVELIKWIKENKPDMIREEEGRLIMFPS 419

Query: 780  DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKA 839
            +  ++P+T+VKSDGGFTYDTSDLAA++ R+ EEK DW +YV D GQ +H   +    +  
Sbjct: 420  E-CTVPLTVVKSDGGFTYDTSDLAALKYRMLEEKVDWNIYVVDAGQNLHLESIYAAGRDL 478

Query: 840  GILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTEL 899
               + N  R++ VGFG+VLGEDRKKFKTRSG+TV+L +LL EG++R+ +KLK+K R   +
Sbjct: 479  EWYDINIHRVEHVGFGLVLGEDRKKFKTRSGETVRLLDLLSEGVKRATEKLKEKGREAVM 538

Query: 900  TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR 959
            T  EL+ A+ AVA+GC+KYADLSH R  DYVFSFD+MLDDRGNTAVYLLYAY RI SI R
Sbjct: 539  TEEELAAARDAVAFGCVKYADLSHTRTQDYVFSFDRMLDDRGNTAVYLLYAYARIRSIVR 598

Query: 960  TAGINSEDLRVAAQSTPV-SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIS 1018
            T+GI    L       P+  L H  E  LAK LL+++D ++ V   L LH +C+Y+Y ++
Sbjct: 599  TSGITDAQLAEYVSKNPILPLNHPAELKLAKQLLKLSDCILQVLDSLMLHQMCDYVYQLA 658

Query: 1019 TAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            T F +FY+ CY IEK  +G+   VH  RL L E TA V+  CF IL IR
Sbjct: 659  TLFHDFYNECYVIEK-KDGEPPVVHFHRLALCEVTANVISTCFKILGIR 706



 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/422 (48%), Positives = 274/422 (64%), Gaps = 42/422 (9%)

Query: 39  NTKLKHRLAILQRAIAEE---EKKQGISSSISSQTK----------------GAAKKMNV 79
           N KLK+R +IL+++IAE+    KK G+ +S  + +K                GAA K + 
Sbjct: 54  NDKLKYRKSILEKSIAEQAAKNKKNGVKASAPTDSKSTAPADKKAKNDGKTGGAAPKQSK 113

Query: 80  PVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDA 132
            V D ++V D+       L  +F  A+  AFP L D    +A T      +FGD+QC  A
Sbjct: 114 KV-DYVTVEDFGSSILGRLQKLFKTAIADAFPGL-DLPLLLAETPNP---QFGDYQCTSA 168

Query: 133 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 192
           M +    K  G  K P D+A+ I        A  P+    I+K+ V   GF+N+FL++ Y
Sbjct: 169 MPIAAKLKSTGVNKKPGDVAKEIE-------AKLPTNVDFIEKVNVLPAGFMNIFLNKDY 221

Query: 193 AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 252
             +QI  +   G+  P + KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL E +G 
Sbjct: 222 ICKQISQLASKGITLPKVAKK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVGF 280

Query: 253 DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 312
           DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P IADLQAFYKESKKRFDEDE+FKKRA
Sbjct: 281 DVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDIADLQAFYKESKKRFDEDEVFKKRA 340

Query: 313 YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE 372
           Y+CVV LQ  + +  KAW  ICDVS++  Q +YD L++ + + GESFYQ  M +L+ +++
Sbjct: 341 YECVVKLQSHEEEIVKAWNTICDVSKKYNQIVYDHLDIKIKDVGESFYQDKMVELIKWIK 400

Query: 373 --KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             K  ++  ++GR IM+  +  ++P+T+VKSDGGFTYDTSDLAA++ R+ EEK DW +YV
Sbjct: 401 ENKPDMIREEEGRLIMFPSE-CTVPLTVVKSDGGFTYDTSDLAALKYRMLEEKVDWNIYV 459

Query: 431 TD 432
            D
Sbjct: 460 VD 461



 Score =  359 bits (922), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 201/426 (47%), Positives = 268/426 (62%), Gaps = 47/426 (11%)

Query: 1057 MKKCFDILNIRTAIAEE--------EKKQGISSSISSQTK----------------GAAK 1092
            +KK  D L  R +I E+         KK G+ +S  + +K                GAA 
Sbjct: 50   VKKLNDKLKYRKSILEKSIAEQAAKNKKNGVKASAPTDSKSTAPADKKAKNDGKTGGAAP 109

Query: 1093 KMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQ 1145
            K +  V D ++V D+       L  +F  A+  AFP L D    +A T      +FGD+Q
Sbjct: 110  KQSKKV-DYVTVEDFGSSILGRLQKLFKTAIADAFPGL-DLPLLLAETPNP---QFGDYQ 164

Query: 1146 CNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL 1205
            C  AM +    K  G  K P D+A+ I        A  P+    I+K+ V   GF+N+FL
Sbjct: 165  CTSAMPIAAKLKSTGVNKKPGDVAKEIE-------AKLPTNVDFIEKVNVLPAGFMNIFL 217

Query: 1206 SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLE 1265
            ++ Y  +QI  +   G+  P + KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL E
Sbjct: 218  NKDYICKQISQLASKGITLPKVAKK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFE 276

Query: 1266 YLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIF 1325
             +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P IADLQAFYKESKKRFDEDE+F
Sbjct: 277  AVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDIADLQAFYKESKKRFDEDEVF 336

Query: 1326 KKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLV 1385
            KKRAY+CVV LQ  + +  KAW  ICDVS++  Q +YD L++ + + GESFYQ  M +L+
Sbjct: 337  KKRAYECVVKLQSHEEEIVKAWNTICDVSKKYNQIVYDHLDIKIKDVGESFYQDKMVELI 396

Query: 1386 PYLE--KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 1443
             +++  K  ++  ++GR IM+  +  ++P+T+VKSDGGFTYDTSDLAA++ R+ EEK DW
Sbjct: 397  KWIKENKPDMIREEEGRLIMFPSE-CTVPLTVVKSDGGFTYDTSDLAALKYRMLEEKVDW 455

Query: 1444 IVYVTD 1449
             +YV D
Sbjct: 456  NIYVVD 461


>gi|308487658|ref|XP_003106024.1| CRE-RARS-1 protein [Caenorhabditis remanei]
 gi|308254598|gb|EFO98550.1| CRE-RARS-1 protein [Caenorhabditis remanei]
          Length = 711

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 316/605 (52%), Positives = 405/605 (66%), Gaps = 24/605 (3%)

Query: 473  DRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL 525
            D ++V DY       L  +F  A+  AFP L D    +A T      +FGD+QC  AM +
Sbjct: 116  DYVTVEDYGSSILGRLQSLFKRAISEAFPGL-DAPLLLAETPNP---QFGDYQCTSAMPI 171

Query: 526  CKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGE 585
                K  G  K P D+ + I        A  P     I+KI V   GF+N+FL   Y   
Sbjct: 172  AAKLKINGINKKPADVGKEIN-------AKLPKNIDFIEKIIVMPAGFINIFLKTDYIRS 224

Query: 586  QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 645
            Q+  +   G+  P + KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL E +G DV+
Sbjct: 225  QVSLLASKGISLPKVAKK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFESVGFDVL 283

Query: 646  RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 705
            R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKKRFDEDE FKKRAY+C
Sbjct: 284  RVNHIGDWGTQFGMLIAHLYDRFPDFLNKLPDISDLQAFYKESKKRFDEDESFKKRAYEC 343

Query: 706  VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE--K 763
            VV LQ  D D  KAW  ICDVS++  Q +YD L++ + + GESFYQ  M  LV +++  K
Sbjct: 344  VVKLQSHDGDIVKAWNTICDVSKKYNQIVYDYLDIKIKDVGESFYQDKMVDLVKWIKQNK 403

Query: 764  KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +L  +DGR+IM+      +P+T+VKSDGGFTYDTSDLAA++ R+ EEK DW +YV D 
Sbjct: 404  PDMLREEDGRQIMFPSG-CDVPLTVVKSDGGFTYDTSDLAALKYRMLEEKVDWNIYVVDA 462

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ +H   +    +  G  + +K R++ VGFG+VLG+D+KKFKTRSG+TV+L +LL EG+
Sbjct: 463  GQSLHLETVYAAGRDFGWYDESKQRVEHVGFGLVLGDDKKKFKTRSGETVRLLDLLSEGV 522

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
            +R+ +KLK+K R   +T  EL+ A+ AVA+GC+KYADLSH R  DYVFSFD+MLDDRGNT
Sbjct: 523  KRATEKLKEKKREAVMTEEELTTARDAVAFGCVKYADLSHTRTQDYVFSFDRMLDDRGNT 582

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV-SLEHEKEFALAKTLLRMNDVLMLVT 1002
            AVYLLYAY RI SI RT+G+N   L     +TPV  L H  E  LAK LL+++D ++LV 
Sbjct: 583  AVYLLYAYARIRSIVRTSGVNDTQLAEYVSNTPVLPLNHPAELKLAKHLLKLSDCILLVL 642

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
              L LH +C+Y+Y ++T F +FY+ CY IEK  + +   VH  RL L E TA V+  CF 
Sbjct: 643  DSLMLHQVCDYVYQLATLFHDFYNECYVIEKKGD-EPPVVHFHRLALCEVTANVISTCFK 701

Query: 1063 ILNIR 1067
            IL IR
Sbjct: 702  ILGIR 706



 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 227/509 (44%), Positives = 298/509 (58%), Gaps = 50/509 (9%)

Query: 35  AQLQNTKLKHRLAILQRAIAEE---EKKQGISSSISSQTKGAA----------KKMNVPV 81
           A+  N KLK+R++IL+++IA++    KK G+ + I S    AA          K    P 
Sbjct: 50  AKKLNDKLKYRMSILEKSIADQTLQNKKNGVKTVIPSSGPNAAPVEKKGKKDGKTGGAPP 109

Query: 82  R-----DRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQC 129
           +     D ++V DY       L  +F  A+  AFP L D    +A T      +FGD+QC
Sbjct: 110 KQAKKIDYVTVEDYGSSILGRLQSLFKRAISEAFPGL-DAPLLLAETPNP---QFGDYQC 165

Query: 130 NDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLS 189
             AM +    K  G  K P D+ + I        A  P     I+KI V   GF+N+FL 
Sbjct: 166 TSAMPIAAKLKINGINKKPADVGKEIN-------AKLPKNIDFIEKIIVMPAGFINIFLK 218

Query: 190 RVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 249
             Y   Q+  +   G+  P + KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL E 
Sbjct: 219 TDYIRSQVSLLASKGISLPKVAKK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFES 277

Query: 250 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFK 309
           +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKKRFDEDE FK
Sbjct: 278 VGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLNKLPDISDLQAFYKESKKRFDEDESFK 337

Query: 310 KRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVP 369
           KRAY+CVV LQ  D D  KAW  ICDVS++  Q +YD L++ + + GESFYQ  M  LV 
Sbjct: 338 KRAYECVVKLQSHDGDIVKAWNTICDVSKKYNQIVYDYLDIKIKDVGESFYQDKMVDLVK 397

Query: 370 YLE--KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           +++  K  +L  +DGR+IM+      +P+T+VKSDGGFTYDTSDLAA++ R+ EEK DW 
Sbjct: 398 WIKQNKPDMLREEDGRQIMFPSG-CDVPLTVVKSDGGFTYDTSDLAALKYRMLEEKVDWN 456

Query: 428 VYVTDH-RSYH-QVLQAIAE-----EEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDY 480
           +YV D  +S H + + A        +E KQ +         G  KK     R   +VR  
Sbjct: 457 IYVVDAGQSLHLETVYAAGRDFGWYDESKQRVEHVGFGLVLGDDKK-KFKTRSGETVR-- 513

Query: 481 LSDVFTHAVQVAFPELGDKTASVASTNEK 509
           L D+ +  V+ A  +L +K      T E+
Sbjct: 514 LLDLLSEGVKRATEKLKEKKREAVMTEEE 542



 Score =  354 bits (908), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 204/424 (48%), Positives = 256/424 (60%), Gaps = 45/424 (10%)

Query: 1058 KKCFDILNIRTAIAE--------EEKKQGISSSISSQTKGAA----------KKMNVPVR 1099
            KK  D L  R +I E        + KK G+ + I S    AA          K    P +
Sbjct: 51   KKLNDKLKYRMSILEKSIADQTLQNKKNGVKTVIPSSGPNAAPVEKKGKKDGKTGGAPPK 110

Query: 1100 -----DRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 1147
                 D ++V DY       L  +F  A+  AFP L D    +A T      +FGD+QC 
Sbjct: 111  QAKKIDYVTVEDYGSSILGRLQSLFKRAISEAFPGL-DAPLLLAETPNP---QFGDYQCT 166

Query: 1148 DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 1207
             AM +    K  G  K P D+ + I        A  P     I+KI V   GF+N+FL  
Sbjct: 167  SAMPIAAKLKINGINKKPADVGKEIN-------AKLPKNIDFIEKIIVMPAGFINIFLKT 219

Query: 1208 VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 1267
             Y   Q+  +   G+  P + KK RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL E +
Sbjct: 220  DYIRSQVSLLASKGISLPKVAKK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFESV 278

Query: 1268 GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 1327
            G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKKRFDEDE FKK
Sbjct: 279  GFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLNKLPDISDLQAFYKESKKRFDEDESFKK 338

Query: 1328 RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 1387
            RAY+CVV LQ  D D  KAW  ICDVS++  Q +YD L++ + + GESFYQ  M  LV +
Sbjct: 339  RAYECVVKLQSHDGDIVKAWNTICDVSKKYNQIVYDYLDIKIKDVGESFYQDKMVDLVKW 398

Query: 1388 LE--KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 1445
            ++  K  +L  +DGR+IM+      +P+T+VKSDGGFTYDTSDLAA++ R+ EEK DW +
Sbjct: 399  IKQNKPDMLREEDGRQIMFPSG-CDVPLTVVKSDGGFTYDTSDLAALKYRMLEEKVDWNI 457

Query: 1446 YVTD 1449
            YV D
Sbjct: 458  YVVD 461


>gi|71985061|ref|NP_001022551.1| Protein RARS-1, isoform a [Caenorhabditis elegans]
 gi|21431831|sp|Q19825.2|SYRC_CAEEL RecName: Full=Probable arginine--tRNA ligase, cytoplasmic; AltName:
            Full=Arginyl-tRNA synthetase; Short=ArgRS
 gi|351058314|emb|CCD65757.1| Protein RARS-1, isoform a [Caenorhabditis elegans]
          Length = 713

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 319/633 (50%), Positives = 419/633 (66%), Gaps = 33/633 (5%)

Query: 447  EKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDK 499
            EKK      +       AKK+     D ++V DY       L  +F  A++ AFP L D 
Sbjct: 97   EKKAKKDGKTGGAPPKQAKKV-----DYVTVEDYGSSIFGRLQSLFKKAIEDAFPGL-DV 150

Query: 500  TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 559
               +A T      +FGD+QCN AM +    K     K P D+A+ I        A  P+ 
Sbjct: 151  PLLLAETPNP---QFGDYQCNSAMPIAAKLKANKINKRPGDVAKEIQ-------AKLPTK 200

Query: 560  AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEM 619
               ++KI+V   GF+N+FL+  Y   QI  +   GV+ P L +K RVLVDFSSPNIAKEM
Sbjct: 201  IDFVEKIDVMPAGFINIFLNTDYLRRQISLLASEGVKLPKLTRK-RVLVDFSSPNIAKEM 259

Query: 620  HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 679
            HVGHLRSTIIGD+I RL E +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+
Sbjct: 260  HVGHLRSTIIGDSICRLFEAVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDIS 319

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DLQAFYKESKKRFDEDE FKKRAY+ VV LQ  D D  KAW  ICDVS++  Q +Y+ L+
Sbjct: 320  DLQAFYKESKKRFDEDEQFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLD 379

Query: 740  VTLTERGESFYQKHMEQLVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGF 795
            + + + GESFYQ  M +LV +++  K  +L  +DGR+IM+  G D   IP+T+VKSDGGF
Sbjct: 380  IKIKDVGESFYQDKMIELVKWVKTNKPDMLREEDGRQIMFPTGCD---IPLTVVKSDGGF 436

Query: 796  TYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFG 855
            TYDTSDLAA++ R+ EEK DW +YV D GQ +H   +    +  G  + +  R++ V FG
Sbjct: 437  TYDTSDLAALKYRMLEEKCDWNIYVVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFG 496

Query: 856  VVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGC 915
            +VLG+D+KKFKTRSG+TV+L +LL EG++R+ +KL +K R T ++  +L  A+ AVA+GC
Sbjct: 497  LVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGC 556

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
            +KYADLSH R  DYVFSFD+ML+DRGNTAVYLLYAYTRI SI     + + DL     ST
Sbjct: 557  VKYADLSHTRTQDYVFSFDRMLEDRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIAST 616

Query: 976  P-VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKD 1034
            P + L+H  EF LAK LL+++D ++LV   L LH +C+Y+Y ++T F +FY+ CY IE +
Sbjct: 617  PTLPLDHPGEFKLAKQLLKLSDCVLLVLDSLMLHQMCDYVYQLATLFHDFYNECYVIE-N 675

Query: 1035 AEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
             EG+   VH  RL L + T KVM  CF IL +R
Sbjct: 676  KEGEKPFVHMHRLALCDVTRKVMSTCFKILGLR 708



 Score =  363 bits (933), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 229/517 (44%), Positives = 307/517 (59%), Gaps = 60/517 (11%)

Query: 35  AQLQNTKLKHRLAILQRAIAEE---EKKQGISSSIS------------------SQTKGA 73
           A+  N KLK+R +IL+++IAE+    KK G+ ++ +                   +T GA
Sbjct: 50  AKKLNDKLKYRKSILEKSIAEQAAKNKKNGVKATSTSSPSSSTSAPAEKKAKKDGKTGGA 109

Query: 74  AKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGD 126
             K    V D ++V DY       L  +F  A++ AFP L D    +A T      +FGD
Sbjct: 110 PPKQAKKV-DYVTVEDYGSSIFGRLQSLFKKAIEDAFPGL-DVPLLLAETPNP---QFGD 164

Query: 127 FQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV 186
           +QCN AM +    K     K P D+A+ I        A  P+    ++KI+V   GF+N+
Sbjct: 165 YQCNSAMPIAAKLKANKINKRPGDVAKEIQ-------AKLPTKIDFVEKIDVMPAGFINI 217

Query: 187 FLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 246
           FL+  Y   QI  +   GV+ P L +K RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL
Sbjct: 218 FLNTDYLRRQISLLASEGVKLPKLTRK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRL 276

Query: 247 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDE 306
            E +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKKRFDEDE
Sbjct: 277 FEAVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDISDLQAFYKESKKRFDEDE 336

Query: 307 IFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQ 366
            FKKRAY+ VV LQ  D D  KAW  ICDVS++  Q +Y+ L++ + + GESFYQ  M +
Sbjct: 337 QFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFYQDKMIE 396

Query: 367 LVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
           LV +++  K  +L  +DGR+IM+  G D   IP+T+VKSDGGFTYDTSDLAA++ R+ EE
Sbjct: 397 LVKWVKTNKPDMLREEDGRQIMFPTGCD---IPLTVVKSDGGFTYDTSDLAALKYRMLEE 453

Query: 423 KADWIVYVTDH-RSYHQVLQAIAEEEKKQGISSSSSSQTKGTA-------KKMNVPVRDR 474
           K DW +YV D  +S H  L+ +    +  G    S  + +  A        K     R  
Sbjct: 454 KCDWNIYVVDSGQSLH--LETVYAAGRDFGWYDESIQRVEHVAFGLVLGDDKKKFKTRSG 511

Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 511
            +VR  L D+ +  V+ A  +L +K    A + E+ V
Sbjct: 512 ETVR--LLDLLSEGVKRATEKLIEKGRETAMSEEQLV 546



 Score =  353 bits (905), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 249/376 (66%), Gaps = 27/376 (7%)

Query: 1085 SQTKGAAKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKY 1137
             +T GA  K    V D ++V DY       L  +F  A++ AFP L D    +A T    
Sbjct: 104  GKTGGAPPKQAKKV-DYVTVEDYGSSIFGRLQSLFKKAIEDAFPGL-DVPLLLAETPNP- 160

Query: 1138 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 1197
              +FGD+QCN AM +    K     K P D+A+ I        A  P+    ++KI+V  
Sbjct: 161  --QFGDYQCNSAMPIAAKLKANKINKRPGDVAKEIQ-------AKLPTKIDFVEKIDVMP 211

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
             GF+N+FL+  Y   QI  +   GV+ P L +K RVLVDFSSPNIAKEMHVGHLRSTIIG
Sbjct: 212  AGFINIFLNTDYLRRQISLLASEGVKLPKLTRK-RVLVDFSSPNIAKEMHVGHLRSTIIG 270

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+I RL E +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKK
Sbjct: 271  DSICRLFEAVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDISDLQAFYKESKK 330

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
            RFDEDE FKKRAY+ VV LQ  D D  KAW  ICDVS++  Q +Y+ L++ + + GESFY
Sbjct: 331  RFDEDEQFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFY 390

Query: 1378 QKHMEQLVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 1433
            Q  M +LV +++  K  +L  +DGR+IM+  G D   IP+T+VKSDGGFTYDTSDLAA++
Sbjct: 391  QDKMIELVKWVKTNKPDMLREEDGRQIMFPTGCD---IPLTVVKSDGGFTYDTSDLAALK 447

Query: 1434 QRIEEEKADWIVYVTD 1449
             R+ EEK DW +YV D
Sbjct: 448  YRMLEEKCDWNIYVVD 463


>gi|339240855|ref|XP_003376353.1| arginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
 gi|316974934|gb|EFV58402.1| arginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 1083

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 314/663 (47%), Positives = 417/663 (62%), Gaps = 62/663 (9%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            SV   L  +F  AV  AFP   +    +  T+ +   K GD+Q N  MA+ K   +    
Sbjct: 29   SVLQSLKLIFAKAVNDAFPNATECPIIITETSSE---KHGDYQFNSCMAIAKFLSNSHST 85

Query: 536  K-NPFDIAQSIASVV--TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
            K +P  +A+ I +V+  T +L    SL   I+KIE+A PGF+N+FL+     ++I DI V
Sbjct: 86   KISPRKVAEEIVNVLMTTVQLEKEKSL---IEKIEIAGPGFLNIFLNFNAVHQRIFDIFV 142

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            NGV+PP L  K RV+VDFSSPNIAKEMHVGHLRSTIIGD I RLLE+ G DV+RLNHVGD
Sbjct: 143  NGVKPPVLPAK-RVVVDFSSPNIAKEMHVGHLRSTIIGDCICRLLEFCGFDVLRLNHVGD 201

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGTQFGMLIAHL+D+FP+Y  + P +ADLQ+FYKESK RFD DE FK RA + VV LQ  
Sbjct: 202  WGTQFGMLIAHLKDRFPNYQNEPPHLADLQSFYKESKVRFDADEEFKSRALKEVVKLQAH 261

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            +P+  KAW +IC +SR                                    GLLE+D+G
Sbjct: 262  EPEQIKAWTLICQLSRH-----------------------------------GLLEIDEG 286

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
            RKI++ E   S P+TIVKSDGG+TYDTSDLAA++ R+ EEKADW++YV D GQG+HF+ +
Sbjct: 287  RKIVFPEG-CSTPLTIVKSDGGYTYDTSDLAALKHRLFEEKADWVLYVVDAGQGLHFQQI 345

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
                K+ G  N N  R+  + FG+VLGED++KF+TRSG+TVKLS+LL+EG+RRS   LK+
Sbjct: 346  FTVGKQLGWWNENSHRVQHIAFGLVLGEDKRKFRTRSGETVKLSDLLEEGMRRSAATLKE 405

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
            K R   L+P EL  AQ++VAYGCIKYADLSHNR  DYVFSFDKML+D+GNTAVYLLYAY+
Sbjct: 406  KQRDQVLSPKELDIAQRSVAYGCIKYADLSHNRKNDYVFSFDKMLEDKGNTAVYLLYAYS 465

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            R+ SI+R A ++ E+L+       +S +H KE  L K +++  D++  V  +   + +C+
Sbjct: 466  RMRSISRNANVSRENLQEKIHCGEISFDHPKELKLMKMIIKFPDIMSHVVENFLPNLICD 525

Query: 1013 YLYDISTAFSEFYDNCYCIEKD-AEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIA 1071
            Y+Y+++T F+EFYD CYCIEKD A G +  ++  RL+L E TA       D+L       
Sbjct: 526  YIYNLATVFTEFYDECYCIEKDPATGALVKINYNRLILCEVTA-------DLLWFSNGKM 578

Query: 1072 EEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRD--YLSDVFTHAVQVAFPELGDKTAS 1129
            +   K+ + S +            +P  D    +   Y   +FT  V V F  LG     
Sbjct: 579  QTAGKRNVGSELDRHLSEW-----IPAEDMTPFKTAFYTVALFTFLV-VVFSLLGSVCCL 632

Query: 1130 VAS 1132
            +AS
Sbjct: 633  LAS 635



 Score =  321 bits (823), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 177/350 (50%), Positives = 224/350 (64%), Gaps = 46/350 (13%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           SV   L  +F  AV  AFP   +    +  T+ +   K GD+Q N  MA+ K   +    
Sbjct: 29  SVLQSLKLIFAKAVNDAFPNATECPIIITETSSE---KHGDYQFNSCMAIAKFLSNSHST 85

Query: 146 K-NPFDIAQSIASVV--TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
           K +P  +A+ I +V+  T +L    SL   I+KIE+A PGF+N+FL+     ++I DI V
Sbjct: 86  KISPRKVAEEIVNVLMTTVQLEKEKSL---IEKIEIAGPGFLNIFLNFNAVHQRIFDIFV 142

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           NGV+PP L  K RV+VDFSSPNIAKEMHVGHLRSTIIGD I RLLE+ G DV+RLNHVGD
Sbjct: 143 NGVKPPVLPAK-RVVVDFSSPNIAKEMHVGHLRSTIIGDCICRLLEFCGFDVLRLNHVGD 201

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGTQFGMLIAHL+D+FP+Y  + P +ADLQ+FYKESK RFD DE FK RA + VV LQ  
Sbjct: 202 WGTQFGMLIAHLKDRFPNYQNEPPHLADLQSFYKESKVRFDADEEFKSRALKEVVKLQAH 261

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           +P+  KAW +IC +SR                                    GLLE+D+G
Sbjct: 262 EPEQIKAWTLICQLSRH-----------------------------------GLLEIDEG 286

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           RKI++ E   S P+TIVKSDGG+TYDTSDLAA++ R+ EEKADW++YV D
Sbjct: 287 RKIVFPEG-CSTPLTIVKSDGGYTYDTSDLAALKHRLFEEKADWVLYVVD 335



 Score =  321 bits (823), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 177/350 (50%), Positives = 224/350 (64%), Gaps = 46/350 (13%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            SV   L  +F  AV  AFP   +    +  T+ +   K GD+Q N  MA+ K   +    
Sbjct: 29   SVLQSLKLIFAKAVNDAFPNATECPIIITETSSE---KHGDYQFNSCMAIAKFLSNSHST 85

Query: 1163 K-NPFDIAQSIASVV--TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
            K +P  +A+ I +V+  T +L    SL   I+KIE+A PGF+N+FL+     ++I DI V
Sbjct: 86   KISPRKVAEEIVNVLMTTVQLEKEKSL---IEKIEIAGPGFLNIFLNFNAVHQRIFDIFV 142

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            NGV+PP L  K RV+VDFSSPNIAKEMHVGHLRSTIIGD I RLLE+ G DV+RLNHVGD
Sbjct: 143  NGVKPPVLPAK-RVVVDFSSPNIAKEMHVGHLRSTIIGDCICRLLEFCGFDVLRLNHVGD 201

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGTQFGMLIAHL+D+FP+Y  + P +ADLQ+FYKESK RFD DE FK RA + VV LQ  
Sbjct: 202  WGTQFGMLIAHLKDRFPNYQNEPPHLADLQSFYKESKVRFDADEEFKSRALKEVVKLQAH 261

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            +P+  KAW +IC +SR                                    GLLE+D+G
Sbjct: 262  EPEQIKAWTLICQLSRH-----------------------------------GLLEIDEG 286

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            RKI++ E   S P+TIVKSDGG+TYDTSDLAA++ R+ EEKADW++YV D
Sbjct: 287  RKIVFPEG-CSTPLTIVKSDGGYTYDTSDLAALKHRLFEEKADWVLYVVD 335


>gi|312066682|ref|XP_003136386.1| arginyl aa-tRNA synthetase 1 [Loa loa]
          Length = 513

 Score =  574 bits (1479), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 280/514 (54%), Positives = 363/514 (70%), Gaps = 47/514 (9%)

Query: 489 VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASV 548
           +Q  +PE+      +  T +    KFGD+Q N +M+                        
Sbjct: 34  LQTLYPEMSTIPILITETQQA---KFGDYQFNSSMS------------------------ 66

Query: 549 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLV 608
                         I ++EVA PG++N+FL++ +    I +I + G++ P + K+ RV+V
Sbjct: 67  --------------IAQMEVAGPGYINIFLNKNWIAASIANIALKGIEIPVIEKR-RVVV 111

Query: 609 DFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKF 668
           DFSSPNIAK+MHVGHLRSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGMLIAHLQD F
Sbjct: 112 DFSSPNIAKQMHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHLQDCF 171

Query: 669 PDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSR 728
           P+++ + PPI+DLQ FYKESKKRFDEDE FK RAYQCV  LQ FDPDY KAW+MICDVSR
Sbjct: 172 PNFINEVPPISDLQTFYKESKKRFDEDEAFKARAYQCVTKLQSFDPDYVKAWQMICDVSR 231

Query: 729 RDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTI 788
           +DF +IYDRL +T+ ERGESFYQKHM +LV  L+K G+LELD+GRKI+     G +P+T+
Sbjct: 232 KDFNQIYDRLGITIVERGESFYQKHMIELVEELDKLGVLELDEGRKIL--RVGGRVPLTV 289

Query: 789 VKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTR 848
           VKSDG FTYDTSDLA ++ R+  +KADWI+YV D GQ +HF L+    +K G  +  + R
Sbjct: 290 VKSDGAFTYDTSDLATLKYRLFVDKADWIIYVVDAGQSLHFELVYAAGQKLGWYSQTEKR 349

Query: 849 MDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQ 908
           ++FV  G+VLGED+KKFKTRSGDTV+L++LLDEG++R+  KL++K R   +   EL+ A+
Sbjct: 350 VEFVSLGLVLGEDKKKFKTRSGDTVRLTDLLDEGVKRAEIKLQEKERDKVMISEELTLAR 409

Query: 909 QAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDL 968
            AVAYGC+KYADLS  R  DYVFSFD+MLDDRGNTAVYLLYA+ RI SI R  G++ ED+
Sbjct: 410 DAVAYGCVKYADLSQTRTQDYVFSFDRMLDDRGNTAVYLLYAFARIKSICRNTGVSDEDI 469

Query: 969 RVAAQSTP---VSLEHEKEFALAKTLLRMNDVLM 999
                S P   + LEH+ EF LAKT+L+  D ++
Sbjct: 470 HNYLCSLPNGVLPLEHKSEFRLAKTILKFTDSIL 503



 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/334 (54%), Positives = 234/334 (70%), Gaps = 44/334 (13%)

Query: 99  VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASV 158
           +Q  +PE+      +  T +    KFGD+Q N +M+                        
Sbjct: 34  LQTLYPEMSTIPILITETQQA---KFGDYQFNSSMS------------------------ 66

Query: 159 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLV 218
                         I ++EVA PG++N+FL++ +    I +I + G++ P + K+ RV+V
Sbjct: 67  --------------IAQMEVAGPGYINIFLNKNWIAASIANIALKGIEIPVIEKR-RVVV 111

Query: 219 DFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKF 278
           DFSSPNIAK+MHVGHLRSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGMLIAHLQD F
Sbjct: 112 DFSSPNIAKQMHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHLQDCF 171

Query: 279 PDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSR 338
           P+++ + PPI+DLQ FYKESKKRFDEDE FK RAYQCV  LQ FDPDY KAW+MICDVSR
Sbjct: 172 PNFINEVPPISDLQTFYKESKKRFDEDEAFKARAYQCVTKLQSFDPDYVKAWQMICDVSR 231

Query: 339 RDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTI 398
           +DF +IYDRL +T+ ERGESFYQKHM +LV  L+K G+LELD+GRKI+     G +P+T+
Sbjct: 232 KDFNQIYDRLGITIVERGESFYQKHMIELVEELDKLGVLELDEGRKIL--RVGGRVPLTV 289

Query: 399 VKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           VKSDG FTYDTSDLA ++ R+  +KADWI+YV D
Sbjct: 290 VKSDGAFTYDTSDLATLKYRLFVDKADWIIYVVD 323



 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/334 (54%), Positives = 234/334 (70%), Gaps = 44/334 (13%)

Query: 1116 VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASV 1175
            +Q  +PE+      +  T +    KFGD+Q N +M+                        
Sbjct: 34   LQTLYPEMSTIPILITETQQA---KFGDYQFNSSMS------------------------ 66

Query: 1176 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLV 1235
                          I ++EVA PG++N+FL++ +    I +I + G++ P + K+ RV+V
Sbjct: 67   --------------IAQMEVAGPGYINIFLNKNWIAASIANIALKGIEIPVIEKR-RVVV 111

Query: 1236 DFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKF 1295
            DFSSPNIAK+MHVGHLRSTIIGD+ISRLL Y+G DV+RLNH+GDWGTQFGMLIAHLQD F
Sbjct: 112  DFSSPNIAKQMHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHLQDCF 171

Query: 1296 PDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSR 1355
            P+++ + PPI+DLQ FYKESKKRFDEDE FK RAYQCV  LQ FDPDY KAW+MICDVSR
Sbjct: 172  PNFINEVPPISDLQTFYKESKKRFDEDEAFKARAYQCVTKLQSFDPDYVKAWQMICDVSR 231

Query: 1356 RDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTI 1415
            +DF +IYDRL +T+ ERGESFYQKHM +LV  L+K G+LELD+GRKI+     G +P+T+
Sbjct: 232  KDFNQIYDRLGITIVERGESFYQKHMIELVEELDKLGVLELDEGRKIL--RVGGRVPLTV 289

Query: 1416 VKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            VKSDG FTYDTSDLA ++ R+  +KADWI+YV D
Sbjct: 290  VKSDGAFTYDTSDLATLKYRLFVDKADWIIYVVD 323


>gi|71985068|ref|NP_001022552.1| Protein RARS-1, isoform b [Caenorhabditis elegans]
 gi|351058315|emb|CCD65758.1| Protein RARS-1, isoform b [Caenorhabditis elegans]
          Length = 692

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 308/608 (50%), Positives = 406/608 (66%), Gaps = 33/608 (5%)

Query: 447  EKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDK 499
            EKK      +       AKK+     D ++V DY       L  +F  A++ AFP L D 
Sbjct: 97   EKKAKKDGKTGGAPPKQAKKV-----DYVTVEDYGSSIFGRLQSLFKKAIEDAFPGL-DV 150

Query: 500  TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 559
               +A T      +FGD+QCN AM +    K     K P D+A+ I        A  P+ 
Sbjct: 151  PLLLAETPNP---QFGDYQCNSAMPIAAKLKANKINKRPGDVAKEIQ-------AKLPTK 200

Query: 560  AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEM 619
               ++KI+V   GF+N+FL+  Y   QI  +   GV+ P L +K RVLVDFSSPNIAKEM
Sbjct: 201  IDFVEKIDVMPAGFINIFLNTDYLRRQISLLASEGVKLPKLTRK-RVLVDFSSPNIAKEM 259

Query: 620  HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 679
            HVGHLRSTIIGD+I RL E +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+
Sbjct: 260  HVGHLRSTIIGDSICRLFEAVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDIS 319

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DLQAFYKESKKRFDEDE FKKRAY+ VV LQ  D D  KAW  ICDVS++  Q +Y+ L+
Sbjct: 320  DLQAFYKESKKRFDEDEQFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLD 379

Query: 740  VTLTERGESFYQKHMEQLVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGF 795
            + + + GESFYQ  M +LV +++  K  +L  +DGR+IM+  G D   IP+T+VKSDGGF
Sbjct: 380  IKIKDVGESFYQDKMIELVKWVKTNKPDMLREEDGRQIMFPTGCD---IPLTVVKSDGGF 436

Query: 796  TYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFG 855
            TYDTSDLAA++ R+ EEK DW +YV D GQ +H   +    +  G  + +  R++ V FG
Sbjct: 437  TYDTSDLAALKYRMLEEKCDWNIYVVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFG 496

Query: 856  VVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGC 915
            +VLG+D+KKFKTRSG+TV+L +LL EG++R+ +KL +K R T ++  +L  A+ AVA+GC
Sbjct: 497  LVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGC 556

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
            +KYADLSH R  DYVFSFD+ML+DRGNTAVYLLYAYTRI SI     + + DL     ST
Sbjct: 557  VKYADLSHTRTQDYVFSFDRMLEDRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIAST 616

Query: 976  P-VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKD 1034
            P + L+H  EF LAK LL+++D ++LV   L LH +C+Y+Y ++T F +FY+ CY IE +
Sbjct: 617  PTLPLDHPGEFKLAKQLLKLSDCVLLVLDSLMLHQMCDYVYQLATLFHDFYNECYVIE-N 675

Query: 1035 AEGKIKTV 1042
             EG IKT+
Sbjct: 676  KEGGIKTI 683



 Score =  363 bits (931), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 229/517 (44%), Positives = 307/517 (59%), Gaps = 60/517 (11%)

Query: 35  AQLQNTKLKHRLAILQRAIAEE---EKKQGISSSIS------------------SQTKGA 73
           A+  N KLK+R +IL+++IAE+    KK G+ ++ +                   +T GA
Sbjct: 50  AKKLNDKLKYRKSILEKSIAEQAAKNKKNGVKATSTSSPSSSTSAPAEKKAKKDGKTGGA 109

Query: 74  AKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGD 126
             K    V D ++V DY       L  +F  A++ AFP L D    +A T      +FGD
Sbjct: 110 PPKQAKKV-DYVTVEDYGSSIFGRLQSLFKKAIEDAFPGL-DVPLLLAETPNP---QFGD 164

Query: 127 FQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV 186
           +QCN AM +    K     K P D+A+ I        A  P+    ++KI+V   GF+N+
Sbjct: 165 YQCNSAMPIAAKLKANKINKRPGDVAKEIQ-------AKLPTKIDFVEKIDVMPAGFINI 217

Query: 187 FLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 246
           FL+  Y   QI  +   GV+ P L +K RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL
Sbjct: 218 FLNTDYLRRQISLLASEGVKLPKLTRK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRL 276

Query: 247 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDE 306
            E +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKKRFDEDE
Sbjct: 277 FEAVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDISDLQAFYKESKKRFDEDE 336

Query: 307 IFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQ 366
            FKKRAY+ VV LQ  D D  KAW  ICDVS++  Q +Y+ L++ + + GESFYQ  M +
Sbjct: 337 QFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFYQDKMIE 396

Query: 367 LVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
           LV +++  K  +L  +DGR+IM+  G D   IP+T+VKSDGGFTYDTSDLAA++ R+ EE
Sbjct: 397 LVKWVKTNKPDMLREEDGRQIMFPTGCD---IPLTVVKSDGGFTYDTSDLAALKYRMLEE 453

Query: 423 KADWIVYVTDH-RSYHQVLQAIAEEEKKQGISSSSSSQTKGTA-------KKMNVPVRDR 474
           K DW +YV D  +S H  L+ +    +  G    S  + +  A        K     R  
Sbjct: 454 KCDWNIYVVDSGQSLH--LETVYAAGRDFGWYDESIQRVEHVAFGLVLGDDKKKFKTRSG 511

Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 511
            +VR  L D+ +  V+ A  +L +K    A + E+ V
Sbjct: 512 ETVR--LLDLLSEGVKRATEKLIEKGRETAMSEEQLV 546



 Score =  352 bits (904), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 249/376 (66%), Gaps = 27/376 (7%)

Query: 1085 SQTKGAAKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKY 1137
             +T GA  K    V D ++V DY       L  +F  A++ AFP L D    +A T    
Sbjct: 104  GKTGGAPPKQAKKV-DYVTVEDYGSSIFGRLQSLFKKAIEDAFPGL-DVPLLLAETPNP- 160

Query: 1138 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 1197
              +FGD+QCN AM +    K     K P D+A+ I        A  P+    ++KI+V  
Sbjct: 161  --QFGDYQCNSAMPIAAKLKANKINKRPGDVAKEIQ-------AKLPTKIDFVEKIDVMP 211

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
             GF+N+FL+  Y   QI  +   GV+ P L +K RVLVDFSSPNIAKEMHVGHLRSTIIG
Sbjct: 212  AGFINIFLNTDYLRRQISLLASEGVKLPKLTRK-RVLVDFSSPNIAKEMHVGHLRSTIIG 270

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+I RL E +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKK
Sbjct: 271  DSICRLFEAVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDISDLQAFYKESKK 330

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
            RFDEDE FKKRAY+ VV LQ  D D  KAW  ICDVS++  Q +Y+ L++ + + GESFY
Sbjct: 331  RFDEDEQFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFY 390

Query: 1378 QKHMEQLVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 1433
            Q  M +LV +++  K  +L  +DGR+IM+  G D   IP+T+VKSDGGFTYDTSDLAA++
Sbjct: 391  QDKMIELVKWVKTNKPDMLREEDGRQIMFPTGCD---IPLTVVKSDGGFTYDTSDLAALK 447

Query: 1434 QRIEEEKADWIVYVTD 1449
             R+ EEK DW +YV D
Sbjct: 448  YRMLEEKCDWNIYVVD 463


>gi|320165286|gb|EFW42185.1| rars protein [Capsaspora owczarzaki ATCC 30864]
          Length = 742

 Score =  554 bits (1427), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 296/598 (49%), Positives = 389/598 (65%), Gaps = 23/598 (3%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +++ D++ ++    ++  FP  G   A +  +N  Y       +   A+ L K     G 
Sbjct: 156  VALFDHVRNMLEMGIEATFPGKGFANAMLVGSNVSY-------KSAAALTLLKRIDGLG- 207

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P+  A  IAS +   L  +  L       EV + GF+ V +        + +I+V+G
Sbjct: 208  --FPYKTAHDIASAIHKNLPKSTLLES--SHFEVDERGFITVVVPAKLLATILTNIVVHG 263

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            V PP   KK RV++DFSSPNIAKEMHVGHLRSTIIG+++ RLLEY G +V+R+NHVGDWG
Sbjct: 264  VLPPKQEKKKRVIIDFSSPNIAKEMHVGHLRSTIIGESLCRLLEYRGFEVLRVNHVGDWG 323

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR-FD 713
            TQFGMLIAHL+D+FP++  +SPPI DLQAFYK SKKRFD DE FKKRAY  VV LQ   D
Sbjct: 324  TQFGMLIAHLKDEFPNFRNESPPIGDLQAFYKASKKRFDADEEFKKRAYTEVVKLQAGTD 383

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
             D + AW++ICD SRR+F+ IY RL+VT+ E+GESFYQ  M  +V  LEK+G ++++DGR
Sbjct: 384  ADVRHAWKLICDESRREFELIYKRLHVTIKEKGESFYQPMMPSVVADLEKRGFVQVEDGR 443

Query: 774  KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLE 833
            KIM+  D+ ++P+T+ KSDGG+TYDTSDLAAI+ RIEEE ADWI+YV D+GQ +H   + 
Sbjct: 444  KIMFVPDQ-AVPLTVEKSDGGYTYDTSDLAAIKYRIEEEHADWIIYVVDVGQSLHLETVF 502

Query: 834  ECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK 893
              AK  G L+P K R+D V FG+VLGED KKFKTRSGDTV+L +LLDE + R+   L D 
Sbjct: 503  SAAKHVGWLDPAKVRVDHVAFGLVLGEDGKKFKTRSGDTVRLVDLLDEAVERAKVVL-DS 561

Query: 894  NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTR 953
             R  +L P E + A  AV+YG +KYADLS +R  DY FSFD+ML   GNTA YLLYAYTR
Sbjct: 562  KRGGDLQPEEYAAALDAVSYGAVKYADLSTSRTSDYTFSFDRMLKLVGNTAPYLLYAYTR 621

Query: 954  IASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEY 1013
            ++SIAR AGI   D+       P       E ALA+ L+R  ++L  +T DL  H L  +
Sbjct: 622  MSSIARNAGI---DVSKEIAKHPCEFTEGPELALARALIRFPEILNRITDDLMPHTLGSF 678

Query: 1014 LYDISTAFSEFYDNCYCIEKD---AEG--KIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            LY+I   +S FY+    IE D   A G   IK++H  RL L EA + V+K+   IL +
Sbjct: 679  LYEICQLYSTFYEKLRIIEHDVDKATGTKTIKSIHYPRLALCEAASLVLKQGLSILGM 736



 Score =  350 bits (898), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 199/451 (44%), Positives = 273/451 (60%), Gaps = 60/451 (13%)

Query: 26  ESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQ---------------- 69
           +SA E ++A   +N +LK++LAIL R+IAEE+     +++ +                  
Sbjct: 57  DSAMEKLVA---ENERLKYQLAILNRSIAEEKASGAGAAAATGAAAAPAAAAKGAKGKEP 113

Query: 70  -------------------TKGAAKKMNVPV-------RDRM-SVRDYLSDVFTHAVQVA 102
                              ++ A +   VP          RM ++ D++ ++    ++  
Sbjct: 114 AAKDAAAAAPAAKKKADKPSQPAFQPAPVPTYQPVDLSEGRMVALFDHVRNMLEMGIEAT 173

Query: 103 FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSE 162
           FP  G   A +  +N  Y       +   A+ L K     G    P+  A  IAS +   
Sbjct: 174 FPGKGFANAMLVGSNVSY-------KSAAALTLLKRIDGLG---FPYKTAHDIASAIHKN 223

Query: 163 LATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSS 222
           L  +  L       EV + GF+ V +        + +I+V+GV PP   KK RV++DFSS
Sbjct: 224 LPKSTLLES--SHFEVDERGFITVVVPAKLLATILTNIVVHGVLPPKQEKKKRVIIDFSS 281

Query: 223 PNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL 282
           PNIAKEMHVGHLRSTIIG+++ RLLEY G +V+R+NHVGDWGTQFGMLIAHL+D+FP++ 
Sbjct: 282 PNIAKEMHVGHLRSTIIGESLCRLLEYRGFEVLRVNHVGDWGTQFGMLIAHLKDEFPNFR 341

Query: 283 TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR-FDPDYKKAWEMICDVSRRDF 341
            +SPPI DLQAFYK SKKRFD DE FKKRAY  VV LQ   D D + AW++ICD SRR+F
Sbjct: 342 NESPPIGDLQAFYKASKKRFDADEEFKKRAYTEVVKLQAGTDADVRHAWKLICDESRREF 401

Query: 342 QKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKS 401
           + IY RL+VT+ E+GESFYQ  M  +V  LEK+G ++++DGRKIM+  D+ ++P+T+ KS
Sbjct: 402 ELIYKRLHVTIKEKGESFYQPMMPSVVADLEKRGFVQVEDGRKIMFVPDQ-AVPLTVEKS 460

Query: 402 DGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           DGG+TYDTSDLAAI+ RIEEE ADWI+YV D
Sbjct: 461 DGGYTYDTSDLAAIKYRIEEEHADWIIYVVD 491



 Score =  349 bits (896), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 178/349 (51%), Positives = 237/349 (67%), Gaps = 14/349 (4%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +++ D++ ++    ++  FP  G   A +  +N  Y       +   A+ L K     G 
Sbjct: 156  VALFDHVRNMLEMGIEATFPGKGFANAMLVGSNVSY-------KSAAALTLLKRIDGLG- 207

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P+  A  IAS +   L  +  L       EV + GF+ V +        + +I+V+G
Sbjct: 208  --FPYKTAHDIASAIHKNLPKSTLLES--SHFEVDERGFITVVVPAKLLATILTNIVVHG 263

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            V PP   KK RV++DFSSPNIAKEMHVGHLRSTIIG+++ RLLEY G +V+R+NHVGDWG
Sbjct: 264  VLPPKQEKKKRVIIDFSSPNIAKEMHVGHLRSTIIGESLCRLLEYRGFEVLRVNHVGDWG 323

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR-FD 1340
            TQFGMLIAHL+D+FP++  +SPPI DLQAFYK SKKRFD DE FKKRAY  VV LQ   D
Sbjct: 324  TQFGMLIAHLKDEFPNFRNESPPIGDLQAFYKASKKRFDADEEFKKRAYTEVVKLQAGTD 383

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
             D + AW++ICD SRR+F+ IY RL+VT+ E+GESFYQ  M  +V  LEK+G ++++DGR
Sbjct: 384  ADVRHAWKLICDESRREFELIYKRLHVTIKEKGESFYQPMMPSVVADLEKRGFVQVEDGR 443

Query: 1401 KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            KIM+  D+ ++P+T+ KSDGG+TYDTSDLAAI+ RIEEE ADWI+YV D
Sbjct: 444  KIMFVPDQ-AVPLTVEKSDGGYTYDTSDLAAIKYRIEEEHADWIIYVVD 491


>gi|167538705|ref|XP_001751014.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770493|gb|EDQ84184.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1019

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 294/609 (48%), Positives = 396/609 (65%), Gaps = 34/609 (5%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTA-SVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            D MSV   + ++ T  ++ AFP+LG++   ++ S     V     +Q N AM L    K 
Sbjct: 87   DLMSV---IVELVTAGIRAAFPQLGEEPVDALVSVPSGKVSTDAMYQSNAAMRLAAQLKA 143

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            KG K  P    + +A+  T+ +  N     +I   E+A PGFVN+ ++  +       ++
Sbjct: 144  KGTKMPP----REVAAAFTAAIPKN----DIISGYEIAGPGFVNIDINTSFLEGVTTKLL 195

Query: 592  VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV PP   K+  V+VDFSSPNIAKEMHVGHLRSTIIG++I+R+LEY+GHDV R+NHVG
Sbjct: 196  NKGVLPPEHTKQ-PVIVDFSSPNIAKEMHVGHLRSTIIGESIARMLEYIGHDVQRVNHVG 254

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGT FGMLI HL+DKFP++ ++ P I+DLQ FYK +KKRFDE+  FK R Y+ VV LQ 
Sbjct: 255  DWGTPFGMLICHLRDKFPNFQSEPPSISDLQGFYKAAKKRFDEEPEFKPRVYEAVVKLQA 314

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             DP+   AW ++CDVSRR+FQ+IYDRL++ + E+GESFYQ  M ++V  LE  G LE DD
Sbjct: 315  HDPETILAWNLVCDVSRREFQRIYDRLDIDVKEKGESFYQDMMVEVVKQLESAGKLEEDD 374

Query: 772  ---GRKIMWG--EDRGSIPMTIVKSDG------GFTYDTSDLAAIRQRIEEEKADWIVYV 820
               GRKI W   +    +P+ +VKSDG      G+TYDTSDLAA+R R  +  A W+VYV
Sbjct: 375  TAPGRKIAWSSVKKETKVPLIVVKSDGARCGMTGYTYDTSDLAALRYRASQ--ATWLVYV 432

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D GQ  HF+ +    +    ++P K R+D VGFGVVLGED K+FKTRSGDTV+L +LLD
Sbjct: 433  VDNGQSTHFQNVFALGRDMEWVSP-KHRVDHVGFGVVLGEDGKRFKTRSGDTVRLKDLLD 491

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            EG+ R+        R TE+TP + +   +A+AYGCIKYADLSHNR  DYVFS+DKML D+
Sbjct: 492  EGVERA----GAAARTTEMTPEQRARMVEAIAYGCIKYADLSHNRTNDYVFSYDKMLQDK 547

Query: 941  GNTAVYLLYAYTRIASIARTAGINSE--DLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
            GNTAVYLLYA TR+ SI R   I  +  D+   A S  V+L H KE  +AK L R  +VL
Sbjct: 548  GNTAVYLLYANTRVHSILRNPEIAKQNIDIDALAPSHTVTLTHPKEIKIAKYLARFPEVL 607

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
                  L  H LC+Y+Y+++  F+EFY  CY ++K ++G +K V   RL+L ++   V++
Sbjct: 608  NRTIDTLMPHRLCDYIYELTNVFTEFYQECYAVQKQSDGSVK-VDVNRLMLYKSVGMVLE 666

Query: 1059 KCFDILNIR 1067
            + F +L IR
Sbjct: 667  QAFHLLGIR 675



 Score =  343 bits (880), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 197/444 (44%), Positives = 272/444 (61%), Gaps = 36/444 (8%)

Query: 3   IKELKLKEFISKVNELSTKGFISESATEDVLA-AQLQNTKLKHRLAILQRAIAEEEKKQG 61
           + E  +KE   ++ +++T G + E+A    L  A  QN KLK++L  L RA+        
Sbjct: 15  LAERTIKELEKEITDVTT-GRVDENAANPALQNAIAQNRKLKYQLEQLTRAME------- 66

Query: 62  ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTA-SVASTNEKY 120
            ++S     K A K       D MSV   + ++ T  ++ AFP+LG++   ++ S     
Sbjct: 67  -AASAPKAAKFALKDSPNHSLDLMSV---IVELVTAGIRAAFPQLGEEPVDALVSVPSGK 122

Query: 121 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 180
           V     +Q N AM L    K KG K  P    + +A+  T+ +  N     +I   E+A 
Sbjct: 123 VSTDAMYQSNAAMRLAAQLKAKGTKMPP----REVAAAFTAAIPKN----DIISGYEIAG 174

Query: 181 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           PGFVN+ ++  +       ++  GV PP   K+  V+VDFSSPNIAKEMHVGHLRSTIIG
Sbjct: 175 PGFVNIDINTSFLEGVTTKLLNKGVLPPEHTKQ-PVIVDFSSPNIAKEMHVGHLRSTIIG 233

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 300
           ++I+R+LEY+GHDV R+NHVGDWGT FGMLI HL+DKFP++ ++ P I+DLQ FYK +KK
Sbjct: 234 ESIARMLEYIGHDVQRVNHVGDWGTPFGMLICHLRDKFPNFQSEPPSISDLQGFYKAAKK 293

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 360
           RFDE+  FK R Y+ VV LQ  DP+   AW ++CDVSRR+FQ+IYDRL++ + E+GESFY
Sbjct: 294 RFDEEPEFKPRVYEAVVKLQAHDPETILAWNLVCDVSRREFQRIYDRLDIDVKEKGESFY 353

Query: 361 QKHMEQLVPYLEKKGLLELDD---GRKIMWG--EDRGSIPMTIVKSDG------GFTYDT 409
           Q  M ++V  LE  G LE DD   GRKI W   +    +P+ +VKSDG      G+TYDT
Sbjct: 354 QDMMVEVVKQLESAGKLEEDDTAPGRKIAWSSVKKETKVPLIVVKSDGARCGMTGYTYDT 413

Query: 410 SDLAAIRQRIEEEKADWIVYVTDH 433
           SDLAA+R R  +  A W+VYV D+
Sbjct: 414 SDLAALRYRASQ--ATWLVYVVDN 435



 Score =  330 bits (847), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 175/363 (48%), Positives = 236/363 (65%), Gaps = 26/363 (7%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTA-SVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            D MSV   + ++ T  ++ AFP+LG++   ++ S     V     +Q N AM L    K 
Sbjct: 87   DLMSV---IVELVTAGIRAAFPQLGEEPVDALVSVPSGKVSTDAMYQSNAAMRLAAQLKA 143

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            KG K  P    + +A+  T+ +  N     +I   E+A PGFVN+ ++  +       ++
Sbjct: 144  KGTKMPP----REVAAAFTAAIPKN----DIISGYEIAGPGFVNIDINTSFLEGVTTKLL 195

Query: 1219 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV PP   K+  V+VDFSSPNIAKEMHVGHLRSTIIG++I+R+LEY+GHDV R+NHVG
Sbjct: 196  NKGVLPPEHTKQ-PVIVDFSSPNIAKEMHVGHLRSTIIGESIARMLEYIGHDVQRVNHVG 254

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGT FGMLI HL+DKFP++ ++ P I+DLQ FYK +KKRFDE+  FK R Y+ VV LQ 
Sbjct: 255  DWGTPFGMLICHLRDKFPNFQSEPPSISDLQGFYKAAKKRFDEEPEFKPRVYEAVVKLQA 314

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             DP+   AW ++CDVSRR+FQ+IYDRL++ + E+GESFYQ  M ++V  LE  G LE DD
Sbjct: 315  HDPETILAWNLVCDVSRREFQRIYDRLDIDVKEKGESFYQDMMVEVVKQLESAGKLEEDD 374

Query: 1399 ---GRKIMWG--EDRGSIPMTIVKSDG------GFTYDTSDLAAIRQRIEEEKADWIVYV 1447
               GRKI W   +    +P+ +VKSDG      G+TYDTSDLAA+R R  +  A W+VYV
Sbjct: 375  TAPGRKIAWSSVKKETKVPLIVVKSDGARCGMTGYTYDTSDLAALRYRASQ--ATWLVYV 432

Query: 1448 TDH 1450
             D+
Sbjct: 433  VDN 435


>gi|297799374|ref|XP_002867571.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
 gi|297313407|gb|EFH43830.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 286/594 (48%), Positives = 391/594 (65%), Gaps = 32/594 (5%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPF 539
            L+ +F  ++++  P+       VA++    + KFGD+QCN+AM L  I K KG + K P 
Sbjct: 15   LAKLFDVSLKLTVPDEPSVEPLVAASA---LGKFGDYQCNNAMGLWSIIKGKGTQFKGPP 71

Query: 540  DIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-- 596
             + Q++  S+ TSE+         ++   VA PGF+NV LS  +  + I+++++NGV   
Sbjct: 72   AVGQALVKSLPTSEM---------VESCSVAGPGFINVVLSAKWMAKSIENMLINGVDTW 122

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
             PTL+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LEY   +V+R NHVGDWGTQ
Sbjct: 123  APTLSVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSNVEVLRRNHVGDWGTQ 181

Query: 657  FGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
            FGMLI +L +KFPD        I DLQ FYK SK +FD DE FK+RA Q VV LQ  DP 
Sbjct: 182  FGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEDFKERAQQAVVRLQGGDPV 241

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
            Y+KAW  ICD+SR +F K+Y RL V L E+GESFY  ++ +++  L  KGL+E  +G ++
Sbjct: 242  YRKAWAKICDISRTEFAKVYQRLRVELEEKGESFYNPYIAKVIEELNSKGLVEESEGARV 301

Query: 776  MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
            ++ E    IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD+GQ  HF +  + 
Sbjct: 302  IFLEGF-DIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQQHFNMFFKA 360

Query: 836  AKKAGILNPN-KT--RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
            A+KAG L  N KT  R++ VGFG+VLGED K+F+TR+ D V+L +LLDE   RS   L +
Sbjct: 361  ARKAGWLPDNDKTYPRVNHVGFGLVLGEDGKRFRTRATDVVRLVDLLDEAKTRSKLALIE 420

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
            + +  E TP EL +  +AV YG +KYADL +NR  +Y FSFD+ML+D+GNTAVYLLYA+ 
Sbjct: 421  RGKDKEWTPEELDQTAEAVGYGAVKYADLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHA 480

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RI SI R +G + ++LR   ++  ++L+H  E AL   LLR  + +     +L    LCE
Sbjct: 481  RICSIIRKSGKDIDELR---KTGKLALDHADERALGLHLLRFAETVEEACTNLLPSVLCE 537

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            YLY++S  ++ FY NC       E       T RLLL EATA VM+KCF +L I
Sbjct: 538  YLYNLSEHYTRFYSNCQVNGSPEE-------TSRLLLCEATAIVMRKCFHLLGI 584



 Score =  323 bits (829), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 171/347 (49%), Positives = 234/347 (67%), Gaps = 19/347 (5%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPF 149
           L+ +F  ++++  P+       VA++    + KFGD+QCN+AM L  I K KG + K P 
Sbjct: 15  LAKLFDVSLKLTVPDEPSVEPLVAASA---LGKFGDYQCNNAMGLWSIIKGKGTQFKGPP 71

Query: 150 DIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-- 206
            + Q++  S+ TSE+         ++   VA PGF+NV LS  +  + I+++++NGV   
Sbjct: 72  AVGQALVKSLPTSEM---------VESCSVAGPGFINVVLSAKWMAKSIENMLINGVDTW 122

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
            PTL+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LEY   +V+R NHVGDWGTQ
Sbjct: 123 APTLSVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSNVEVLRRNHVGDWGTQ 181

Query: 267 FGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 325
           FGMLI +L +KFPD        I DLQ FYK SK +FD DE FK+RA Q VV LQ  DP 
Sbjct: 182 FGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEDFKERAQQAVVRLQGGDPV 241

Query: 326 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
           Y+KAW  ICD+SR +F K+Y RL V L E+GESFY  ++ +++  L  KGL+E  +G ++
Sbjct: 242 YRKAWAKICDISRTEFAKVYQRLRVELEEKGESFYNPYIAKVIEELNSKGLVEESEGARV 301

Query: 386 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           ++ E    IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD
Sbjct: 302 IFLEGF-DIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTD 347



 Score =  323 bits (829), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 171/347 (49%), Positives = 234/347 (67%), Gaps = 19/347 (5%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPF 1166
            L+ +F  ++++  P+       VA++    + KFGD+QCN+AM L  I K KG + K P 
Sbjct: 15   LAKLFDVSLKLTVPDEPSVEPLVAASA---LGKFGDYQCNNAMGLWSIIKGKGTQFKGPP 71

Query: 1167 DIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-- 1223
             + Q++  S+ TSE+         ++   VA PGF+NV LS  +  + I+++++NGV   
Sbjct: 72   AVGQALVKSLPTSEM---------VESCSVAGPGFINVVLSAKWMAKSIENMLINGVDTW 122

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
             PTL+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LEY   +V+R NHVGDWGTQ
Sbjct: 123  APTLSVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSNVEVLRRNHVGDWGTQ 181

Query: 1284 FGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
            FGMLI +L +KFPD        I DLQ FYK SK +FD DE FK+RA Q VV LQ  DP 
Sbjct: 182  FGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEDFKERAQQAVVRLQGGDPV 241

Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
            Y+KAW  ICD+SR +F K+Y RL V L E+GESFY  ++ +++  L  KGL+E  +G ++
Sbjct: 242  YRKAWAKICDISRTEFAKVYQRLRVELEEKGESFYNPYIAKVIEELNSKGLVEESEGARV 301

Query: 1403 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++ E    IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD
Sbjct: 302  IFLEGF-DIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTD 347


>gi|15236164|ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
 gi|2632105|emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|4539426|emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|7269482|emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332659782|gb|AEE85182.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
          Length = 642

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/646 (45%), Positives = 409/646 (63%), Gaps = 37/646 (5%)

Query: 429  YVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHA 488
            +  DH ++  V + +     +   SS + S     A +         +++  L+ +F  +
Sbjct: 20   FSADHLTFTTVTEKLRATAWRFAFSSRAKSVVAMAANEEFTG-----NLKRQLAKLFDVS 74

Query: 489  VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIA- 546
            +++  P+       VA++    + KFGD+QCN+AM L  I K KG + K P  + Q++  
Sbjct: 75   LKLTVPDEPSVEPLVAASA---LGKFGDYQCNNAMGLWSIIKGKGTQFKGPPAVGQALVK 131

Query: 547  SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKL 604
            S+ TSE+         ++   VA PGF+NV LS  +  + I++++++GV    PTL+ K 
Sbjct: 132  SLPTSEM---------VESCSVAGPGFINVVLSAKWMAKSIENMLIDGVDTWAPTLSVK- 181

Query: 605  RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL 664
            R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LEY   +V+R NHVGDWGTQFGMLI +L
Sbjct: 182  RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDWGTQFGMLIEYL 241

Query: 665  QDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMI 723
             +KFPD        I DLQ FYK SK +FD DE FK++A Q VV LQ  DP Y+KAW  I
Sbjct: 242  FEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQGGDPVYRKAWAKI 301

Query: 724  CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 783
            CD+SR +F K+Y RL V L E+GESFY  H+ +++  L  KGL+E  +G ++++ E    
Sbjct: 302  CDISRTEFAKVYQRLRVELEEKGESFYNPHIAKVIEELNSKGLVEESEGARVIFLEGF-D 360

Query: 784  IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILN 843
            IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD+GQ  HF +  + A+KAG L 
Sbjct: 361  IPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQQHFNMFFKAARKAGWLP 420

Query: 844  PN-KT--RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELT 900
             N KT  R++ VGFG+VLGED K+F+TR+ D V+L +LLDE   RS   L ++ +  E T
Sbjct: 421  DNDKTYPRVNHVGFGLVLGEDGKRFRTRATDVVRLVDLLDEAKTRSKLALIERGKDKEWT 480

Query: 901  PTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIART 960
            P EL +  +AV YG +KYADL +NR  +Y FSFD+ML+D+GNTAVYLLYA+ RI SI R 
Sbjct: 481  PEELDQTAEAVGYGAVKYADLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRK 540

Query: 961  AGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTA 1020
            +G + ++L+   ++  ++L+H  E AL   LLR  + +     +L    LCEYLY++S  
Sbjct: 541  SGKDIDELK---KTGKLALDHADERALGLHLLRFAETVEEACTNLLPSVLCEYLYNLSEH 597

Query: 1021 FSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            F+ FY NC       E       T RLLL EATA VM+KCF +L I
Sbjct: 598  FTRFYSNCQVNGSPEE-------TSRLLLCEATAIVMRKCFHLLGI 636



 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 170/347 (48%), Positives = 234/347 (67%), Gaps = 19/347 (5%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPF 149
           L+ +F  ++++  P+       VA++    + KFGD+QCN+AM L  I K KG + K P 
Sbjct: 67  LAKLFDVSLKLTVPDEPSVEPLVAASA---LGKFGDYQCNNAMGLWSIIKGKGTQFKGPP 123

Query: 150 DIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-- 206
            + Q++  S+ TSE+         ++   VA PGF+NV LS  +  + I++++++GV   
Sbjct: 124 AVGQALVKSLPTSEM---------VESCSVAGPGFINVVLSAKWMAKSIENMLIDGVDTW 174

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
            PTL+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LEY   +V+R NHVGDWGTQ
Sbjct: 175 APTLSVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDWGTQ 233

Query: 267 FGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 325
           FGMLI +L +KFPD        I DLQ FYK SK +FD DE FK++A Q VV LQ  DP 
Sbjct: 234 FGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQGGDPV 293

Query: 326 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
           Y+KAW  ICD+SR +F K+Y RL V L E+GESFY  H+ +++  L  KGL+E  +G ++
Sbjct: 294 YRKAWAKICDISRTEFAKVYQRLRVELEEKGESFYNPHIAKVIEELNSKGLVEESEGARV 353

Query: 386 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           ++ E    IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD
Sbjct: 354 IFLEGF-DIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTD 399



 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 170/347 (48%), Positives = 234/347 (67%), Gaps = 19/347 (5%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPF 1166
            L+ +F  ++++  P+       VA++    + KFGD+QCN+AM L  I K KG + K P 
Sbjct: 67   LAKLFDVSLKLTVPDEPSVEPLVAASA---LGKFGDYQCNNAMGLWSIIKGKGTQFKGPP 123

Query: 1167 DIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-- 1223
             + Q++  S+ TSE+         ++   VA PGF+NV LS  +  + I++++++GV   
Sbjct: 124  AVGQALVKSLPTSEM---------VESCSVAGPGFINVVLSAKWMAKSIENMLIDGVDTW 174

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
             PTL+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LEY   +V+R NHVGDWGTQ
Sbjct: 175  APTLSVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDWGTQ 233

Query: 1284 FGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
            FGMLI +L +KFPD        I DLQ FYK SK +FD DE FK++A Q VV LQ  DP 
Sbjct: 234  FGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQGGDPV 293

Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
            Y+KAW  ICD+SR +F K+Y RL V L E+GESFY  H+ +++  L  KGL+E  +G ++
Sbjct: 294  YRKAWAKICDISRTEFAKVYQRLRVELEEKGESFYNPHIAKVIEELNSKGLVEESEGARV 353

Query: 1403 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++ E    IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD
Sbjct: 354  IFLEGF-DIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTD 399


>gi|2632106|emb|CAB11469.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 590

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/599 (47%), Positives = 394/599 (65%), Gaps = 32/599 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            +++  L+ +F  ++++  P+       VA++    + KFGD+QCN+AM L  I K KG +
Sbjct: 10   NLKRQLAKLFDVSLKLTVPDEPSVEPLVAASA---LGKFGDYQCNNAMGLWSIIKGKGTQ 66

Query: 536  -KNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
             K P  + Q++  S+ TSE+         ++   VA PGF+NV LS  +  + I++++++
Sbjct: 67   FKGPPAVGQALVKSLPTSEM---------VESCSVAGPGFINVVLSAKWMAKSIENMLID 117

Query: 594  GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
            GV    PTL+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LEY   +V+R NHVG
Sbjct: 118  GVDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVG 176

Query: 652  DWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            DWGTQFGMLI +L +KFPD        I DLQ FYK SK +FD DE FK++A Q VV LQ
Sbjct: 177  DWGTQFGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQ 236

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              DP Y+KAW  ICD+SR +F K+Y RL V L E+GESFY  H+ +++  L  KGL+E  
Sbjct: 237  GGDPVYRKAWAKICDISRTEFAKVYQRLRVELEEKGESFYNPHIAKVIEELNSKGLVEES 296

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            +G ++++ E    IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD+GQ  HF 
Sbjct: 297  EGARVIFLEGF-DIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQQHFN 355

Query: 831  LLEECAKKAGILNPN-KT--RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            +  + A+KAG L  N KT  R++ VGFG+VLGED K+F+TR+ D V+L +LLDE   RS 
Sbjct: 356  MFFKAARKAGWLPDNDKTYPRVNHVGFGLVLGEDGKRFRTRATDVVRLVDLLDEAKTRSK 415

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
              L ++ +  E TP EL +  +AV YG +KYADL +NR  +Y FSFD+ML+D+GNTAVYL
Sbjct: 416  LALIERGKDKEWTPEELDQTAEAVGYGAVKYADLKNNRLTNYTFSFDQMLNDKGNTAVYL 475

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+ RI SI R +G + ++L+   ++  ++L+H  E AL   LLR  + +     +L  
Sbjct: 476  LYAHARICSIIRKSGKDIDELK---KTGKLALDHADERALGLHLLRFAETVEEACTNLLP 532

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
              LCEYLY++S  F+ FY NC       E       T RLLL EATA VM+KCF +L I
Sbjct: 533  SVLCEYLYNLSEHFTRFYSNCQVNGSPEE-------TSRLLLCEATAIVMRKCFHLLGI 584



 Score =  323 bits (827), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 170/352 (48%), Positives = 237/352 (67%), Gaps = 19/352 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           +++  L+ +F  ++++  P+       VA++    + KFGD+QCN+AM L  I K KG +
Sbjct: 10  NLKRQLAKLFDVSLKLTVPDEPSVEPLVAASA---LGKFGDYQCNNAMGLWSIIKGKGTQ 66

Query: 146 -KNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
            K P  + Q++  S+ TSE+         ++   VA PGF+NV LS  +  + I++++++
Sbjct: 67  FKGPPAVGQALVKSLPTSEM---------VESCSVAGPGFINVVLSAKWMAKSIENMLID 117

Query: 204 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
           GV    PTL+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LEY   +V+R NHVG
Sbjct: 118 GVDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVG 176

Query: 262 DWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           DWGTQFGMLI +L +KFPD        I DLQ FYK SK +FD DE FK++A Q VV LQ
Sbjct: 177 DWGTQFGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQ 236

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             DP Y+KAW  ICD+SR +F K+Y RL V L E+GESFY  H+ +++  L  KGL+E  
Sbjct: 237 GGDPVYRKAWAKICDISRTEFAKVYQRLRVELEEKGESFYNPHIAKVIEELNSKGLVEES 296

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +G ++++ E    IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD
Sbjct: 297 EGARVIFLEGF-DIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTD 347



 Score =  323 bits (827), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 170/352 (48%), Positives = 237/352 (67%), Gaps = 19/352 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            +++  L+ +F  ++++  P+       VA++    + KFGD+QCN+AM L  I K KG +
Sbjct: 10   NLKRQLAKLFDVSLKLTVPDEPSVEPLVAASA---LGKFGDYQCNNAMGLWSIIKGKGTQ 66

Query: 1163 -KNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
             K P  + Q++  S+ TSE+         ++   VA PGF+NV LS  +  + I++++++
Sbjct: 67   FKGPPAVGQALVKSLPTSEM---------VESCSVAGPGFINVVLSAKWMAKSIENMLID 117

Query: 1221 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
            GV    PTL+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LEY   +V+R NHVG
Sbjct: 118  GVDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVG 176

Query: 1279 DWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            DWGTQFGMLI +L +KFPD        I DLQ FYK SK +FD DE FK++A Q VV LQ
Sbjct: 177  DWGTQFGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQ 236

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              DP Y+KAW  ICD+SR +F K+Y RL V L E+GESFY  H+ +++  L  KGL+E  
Sbjct: 237  GGDPVYRKAWAKICDISRTEFAKVYQRLRVELEEKGESFYNPHIAKVIEELNSKGLVEES 296

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +G ++++ E    IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD
Sbjct: 297  EGARVIFLEGF-DIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTD 347


>gi|225445067|ref|XP_002280299.1| PREDICTED: arginyl-tRNA synthetase-like [Vitis vinifera]
          Length = 649

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 273/597 (45%), Positives = 383/597 (64%), Gaps = 28/597 (4%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            +V+  LS +F  ++++  P   D    +A+       KFGD+QCN+AM L    K+K  K
Sbjct: 69   TVKKQLSKLFEQSLRITVPSESDVEPLIAAC----APKFGDYQCNNAMGLWSRIKNK--K 122

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
             N F    +I  V+   L       ++I+K  +A PGFVN+ LS  +  + I+ +++ G+
Sbjct: 123  DNGFKGPPTIGKVIMENLPP----TEMIEKCTLAGPGFVNIKLSTSWIAKNIQKMLIIGI 178

Query: 596  Q--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
            +   P L  K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVGDW
Sbjct: 179  ETWAPRLPIK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDW 237

Query: 654  GTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            GTQFGMLI  L DKFP++   S   I DLQ FYK SKKRFDED  FK RA Q VV LQ  
Sbjct: 238  GTQFGMLIEFLFDKFPNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRLQGG 297

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            +  Y++AW  IC++SR +F K+Y RL V L E+GESFY  ++  ++  L  +GL+E   G
Sbjct: 298  ETSYRRAWAQICEISRNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEESQG 357

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             +++  E   +IP+ +VKSDGG+ Y ++D+AA+  R+ EEKA+WI+YVTD+GQ  HF ++
Sbjct: 358  ARVIHIEGV-NIPLIVVKSDGGYNYASTDMAALWYRLNEEKAEWIIYVTDVGQQQHFEMV 416

Query: 833  EECAKKAGILNPNKT---RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
               AK AG L  N     +   VGFG+VLGED K+F+TR+ + V+L +LLDE   RS   
Sbjct: 417  FSAAKLAGWLPANDNMYPKASHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKNRSKSV 476

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            L ++ +  E T  EL    +AV YG +KYADL +NR  +Y F+FD+ML+D+GNTAVYLLY
Sbjct: 477  LIERGKAAEWTEQELEHTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLNDKGNTAVYLLY 536

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+ RI SI R +G + ++L+   ++  ++L+H+ E  L   LL+ ++V+     +L  + 
Sbjct: 537  AHARICSIIRKSGKDIDELK---KTGVLTLDHDDERGLGLHLLQFSEVVEEACTNLLPNV 593

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            LCEYLY++S  F++FY NC  +    E       T RLLL EATA VM+KCF +L I
Sbjct: 594  LCEYLYNLSENFTKFYSNCQVVGSAEE-------TSRLLLCEATAVVMRKCFHLLGI 643



 Score =  316 bits (809), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 165/350 (47%), Positives = 228/350 (65%), Gaps = 15/350 (4%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           +V+  LS +F  ++++  P   D    +A+       KFGD+QCN+AM L    K+K  K
Sbjct: 69  TVKKQLSKLFEQSLRITVPSESDVEPLIAAC----APKFGDYQCNNAMGLWSRIKNK--K 122

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
            N F    +I  V+   L       ++I+K  +A PGFVN+ LS  +  + I+ +++ G+
Sbjct: 123 DNGFKGPPTIGKVIMENLPP----TEMIEKCTLAGPGFVNIKLSTSWIAKNIQKMLIIGI 178

Query: 206 Q--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
           +   P L  K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVGDW
Sbjct: 179 ETWAPRLPIK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDW 237

Query: 264 GTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           GTQFGMLI  L DKFP++   S   I DLQ FYK SKKRFDED  FK RA Q VV LQ  
Sbjct: 238 GTQFGMLIEFLFDKFPNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRLQGG 297

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           +  Y++AW  IC++SR +F K+Y RL V L E+GESFY  ++  ++  L  +GL+E   G
Sbjct: 298 ETSYRRAWAQICEISRNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEESQG 357

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            +++  E   +IP+ +VKSDGG+ Y ++D+AA+  R+ EEKA+WI+YVTD
Sbjct: 358 ARVIHIEGV-NIPLIVVKSDGGYNYASTDMAALWYRLNEEKAEWIIYVTD 406



 Score =  316 bits (809), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 165/350 (47%), Positives = 228/350 (65%), Gaps = 15/350 (4%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            +V+  LS +F  ++++  P   D    +A+       KFGD+QCN+AM L    K+K  K
Sbjct: 69   TVKKQLSKLFEQSLRITVPSESDVEPLIAAC----APKFGDYQCNNAMGLWSRIKNK--K 122

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
             N F    +I  V+   L       ++I+K  +A PGFVN+ LS  +  + I+ +++ G+
Sbjct: 123  DNGFKGPPTIGKVIMENLPP----TEMIEKCTLAGPGFVNIKLSTSWIAKNIQKMLIIGI 178

Query: 1223 Q--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
            +   P L  K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVGDW
Sbjct: 179  ETWAPRLPIK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDW 237

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            GTQFGMLI  L DKFP++   S   I DLQ FYK SKKRFDED  FK RA Q VV LQ  
Sbjct: 238  GTQFGMLIEFLFDKFPNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRLQGG 297

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            +  Y++AW  IC++SR +F K+Y RL V L E+GESFY  ++  ++  L  +GL+E   G
Sbjct: 298  ETSYRRAWAQICEISRNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEESQG 357

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             +++  E   +IP+ +VKSDGG+ Y ++D+AA+  R+ EEKA+WI+YVTD
Sbjct: 358  ARVIHIEGV-NIPLIVVKSDGGYNYASTDMAALWYRLNEEKAEWIIYVTD 406


>gi|449435790|ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cucumis sativus]
 gi|449489808|ref|XP_004158422.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cucumis sativus]
          Length = 590

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 275/600 (45%), Positives = 390/600 (65%), Gaps = 34/600 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            +++  L+ +F  +++   P+  D    VA+       KFGD+QCN+AM L    K KG +
Sbjct: 10   NIKRQLAKIFDVSLRATVPDETDVEPLVAAC----AGKFGDYQCNNAMGLWSKIKGKGTQ 65

Query: 536  -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             + P  + Q+I          N   +++I+   VA PGFVNV +S+ +  + I++++++G
Sbjct: 66   FRGPPSVGQTIMK--------NLPPSEIIESSSVAGPGFVNVVISKNWIAKTIQNMLIDG 117

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            +    P L  K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVGD
Sbjct: 118  IDTWSPRLPFK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGD 176

Query: 653  WGTQFGMLIAHLQDKFPDY--LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            WGTQFGMLI  L +KFP++  +T++  I DLQ FYK SK+RFD D  FK++A Q VV LQ
Sbjct: 177  WGTQFGMLIEFLFEKFPNWEEVTETA-IGDLQTFYKASKQRFDSDPAFKEKAQQAVVLLQ 235

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              +P Y+KAW  IC++SR +F ++Y+RL V L E+GESFY  ++  ++  L  KGL+E  
Sbjct: 236  GGEPKYRKAWAQICEISRNEFNRVYERLGVQLEEKGESFYNPYIPNVIKELTDKGLVEES 295

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
             G ++++  D  +IP+ +VKSDGGF Y ++DLAAI  R+ EEKA+WI+YVTD+GQ  HF 
Sbjct: 296  QGARVIF-IDGINIPLIVVKSDGGFNYASTDLAAIWYRLNEEKAEWIIYVTDVGQQQHFD 354

Query: 831  LLEECAKKAGIL--NPNK-TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            ++    K+AG L    NK  +   VGFG+VLGED K+F+TR+ + V+L +LLDE   RS 
Sbjct: 355  MVFRAGKRAGWLPLEDNKYPKTTHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKNRSK 414

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
              L ++ +  E T  EL +  +AV YG +KYADL +NR  +Y F+FD+ML+D+GNTAVYL
Sbjct: 415  AALIEREKAAEWTEAELEQIAEAVGYGAVKYADLKNNRLTNYTFNFDQMLNDKGNTAVYL 474

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+ RI SI R +G N E+L+   ++  + LEHE E  L   LL+  +V+     +L  
Sbjct: 475  LYAHARICSIIRKSGKNIEELK---KTGTIVLEHEDERVLGLHLLQFAEVVEEACTNLLP 531

Query: 1008 HHLCEYLYDISTAFS-EFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            + LCEYLY++S  F+ +FY NC  +    E       T RLLL EAT  VM+KCF +L I
Sbjct: 532  NVLCEYLYNLSEIFTKKFYSNCQVVGSAQE-------TSRLLLCEATGTVMRKCFHLLGI 584



 Score =  316 bits (810), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 164/352 (46%), Positives = 236/352 (67%), Gaps = 20/352 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           +++  L+ +F  +++   P+  D    VA+       KFGD+QCN+AM L    K KG +
Sbjct: 10  NIKRQLAKIFDVSLRATVPDETDVEPLVAAC----AGKFGDYQCNNAMGLWSKIKGKGTQ 65

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            + P  + Q+I          N   +++I+   VA PGFVNV +S+ +  + I++++++G
Sbjct: 66  FRGPPSVGQTIMK--------NLPPSEIIESSSVAGPGFVNVVISKNWIAKTIQNMLIDG 117

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           +    P L  K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVGD
Sbjct: 118 IDTWSPRLPFK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGD 176

Query: 263 WGTQFGMLIAHLQDKFPDY--LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           WGTQFGMLI  L +KFP++  +T++  I DLQ FYK SK+RFD D  FK++A Q VV LQ
Sbjct: 177 WGTQFGMLIEFLFEKFPNWEEVTET-AIGDLQTFYKASKQRFDSDPAFKEKAQQAVVLLQ 235

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             +P Y+KAW  IC++SR +F ++Y+RL V L E+GESFY  ++  ++  L  KGL+E  
Sbjct: 236 GGEPKYRKAWAQICEISRNEFNRVYERLGVQLEEKGESFYNPYIPNVIKELTDKGLVEES 295

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            G ++++  D  +IP+ +VKSDGGF Y ++DLAAI  R+ EEKA+WI+YVTD
Sbjct: 296 QGARVIF-IDGINIPLIVVKSDGGFNYASTDLAAIWYRLNEEKAEWIIYVTD 346



 Score =  316 bits (810), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 164/352 (46%), Positives = 236/352 (67%), Gaps = 20/352 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            +++  L+ +F  +++   P+  D    VA+       KFGD+QCN+AM L    K KG +
Sbjct: 10   NIKRQLAKIFDVSLRATVPDETDVEPLVAAC----AGKFGDYQCNNAMGLWSKIKGKGTQ 65

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             + P  + Q+I          N   +++I+   VA PGFVNV +S+ +  + I++++++G
Sbjct: 66   FRGPPSVGQTIMK--------NLPPSEIIESSSVAGPGFVNVVISKNWIAKTIQNMLIDG 117

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            +    P L  K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVGD
Sbjct: 118  IDTWSPRLPFK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGD 176

Query: 1280 WGTQFGMLIAHLQDKFPDY--LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            WGTQFGMLI  L +KFP++  +T++  I DLQ FYK SK+RFD D  FK++A Q VV LQ
Sbjct: 177  WGTQFGMLIEFLFEKFPNWEEVTET-AIGDLQTFYKASKQRFDSDPAFKEKAQQAVVLLQ 235

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              +P Y+KAW  IC++SR +F ++Y+RL V L E+GESFY  ++  ++  L  KGL+E  
Sbjct: 236  GGEPKYRKAWAQICEISRNEFNRVYERLGVQLEEKGESFYNPYIPNVIKELTDKGLVEES 295

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             G ++++  D  +IP+ +VKSDGGF Y ++DLAAI  R+ EEKA+WI+YVTD
Sbjct: 296  QGARVIF-IDGINIPLIVVKSDGGFNYASTDLAAIWYRLNEEKAEWIIYVTD 346


>gi|298710528|emb|CBJ25592.1| Arginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 906

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 275/621 (44%), Positives = 390/621 (62%), Gaps = 33/621 (5%)

Query: 457  SSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV--HKF 514
            ++ T  T  K +  V  +  ++  L  +F  A+  A+P    K+A + S++ +    +K 
Sbjct: 304  AASTIDTFTKASKGVSLKAGLQASLLAMFDAAMFKAWPLA--KSAGITSSSVRKCADYKN 361

Query: 515  GDFQCNDAMALCKIFKDK-GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            GDFQCN AMAL K  K   G   +P    Q+ AS + + L  NP    ++D   V+  G+
Sbjct: 362  GDFQCNAAMALFKALKGGDGAPSSP----QAAASAIVASLPVNP----LVDTTSVSPQGY 413

Query: 574  VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            +N+ L   +  + I  +I NG  PP + KK+RV+VDFSSPNIAKEMHVGHLRSTIIG+ I
Sbjct: 414  INIRLRPAFINQSIAKVIKNGPAPPEV-KKMRVVVDFSSPNIAKEMHVGHLRSTIIGEAI 472

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
             R+LE+ GH V R NHVGDWGTQFGMLI ++++ +P++LT  P I DL  FYK +K RFD
Sbjct: 473  CRVLEFCGHTVFRHNHVGDWGTQFGMLINYMKEAYPNFLTDPPNITDLTTFYKAAKLRFD 532

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 753
            E E FK+ +   VV LQ  DP  K+ W ++CD+SR++FQK+YDRL+VTL E GESFY   
Sbjct: 533  ESEEFKEASRNTVVDLQSGDPACKEVWTLLCDISRKEFQKVYDRLDVTLEEHGESFYNDM 592

Query: 754  MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 813
            +   +  L + GL+  DDG  I+  E   + P+ + K DGGF YD++D+ AIR R++  K
Sbjct: 593  IPSTIDMLAEAGLVSRDDGADIVRLE-HFTYPLIVRKRDGGFGYDSTDMTAIRYRLKTLK 651

Query: 814  ADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTV 873
             DWI+ +TD GQ  HF +  + A+ AG ++   T+++ +GFGVVLG D KKFKTRSGDTV
Sbjct: 652  CDWIIGITDAGQASHFHMCFDAARAAGWVD-EGTKLEHLGFGVVLGPDGKKFKTRSGDTV 710

Query: 874  KLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVF 931
            +L +LLDE +RR    ++++    ++T T+   + A   + YG +KY DL  + +  YVF
Sbjct: 711  RLVDLLDEAVRRMAASIQERMDEGKMTTTKEAAAAAAAEIGYGAVKYYDLRQHPSTSYVF 770

Query: 932  SFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRV---AAQSTP--VSLEHEKEFA 986
            S+D+MLD RGNTAVYL +A+ R+ASI   A    ++L V   A +++P  VS+EHE E A
Sbjct: 771  SYDRMLDTRGNTAVYLQFAHARLASILLKA---QDELHVDVTALKASPEKVSVEHESERA 827

Query: 987  LAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGR 1046
            LA  LL  +DV+     DL  + LCEYLY ++T F++F  NC  +  D +       T R
Sbjct: 828  LAFELLMFSDVIEACLADLGPNRLCEYLYTLATKFTDFVTNCRVLGSDEQ-------TSR 880

Query: 1047 LLLAEATAKVMKKCFDILNIR 1067
            LLL EAT   M+KCF +L ++
Sbjct: 881  LLLCEATGVTMRKCFSLLGMK 901



 Score =  318 bits (816), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 178/414 (42%), Positives = 257/414 (62%), Gaps = 22/414 (5%)

Query: 22  GFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPV 81
           G  +++A   +  A+  +T L   LA  QR + E    +  +S+I + TK A+K +++  
Sbjct: 266 GVTAQAAITALGEAEATST-LAKVLAYAQR-VGEMPACKQAASTIDTFTK-ASKGVSL-- 320

Query: 82  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV--HKFGDFQCNDAMALCKIF 139
             +  ++  L  +F  A+  A+P    K+A + S++ +    +K GDFQCN AMAL K  
Sbjct: 321 --KAGLQASLLAMFDAAMFKAWPLA--KSAGITSSSVRKCADYKNGDFQCNAAMALFKAL 376

Query: 140 KDK-GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 198
           K   G   +P    Q+ AS + + L  NP    ++D   V+  G++N+ L   +  + I 
Sbjct: 377 KGGDGAPSSP----QAAASAIVASLPVNP----LVDTTSVSPQGYINIRLRPAFINQSIA 428

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +I NG  PP + KK+RV+VDFSSPNIAKEMHVGHLRSTIIG+ I R+LE+ GH V R N
Sbjct: 429 KVIKNGPAPPEV-KKMRVVVDFSSPNIAKEMHVGHLRSTIIGEAICRVLEFCGHTVFRHN 487

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLI ++++ +P++LT  P I DL  FYK +K RFDE E FK+ +   VV 
Sbjct: 488 HVGDWGTQFGMLINYMKEAYPNFLTDPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVD 547

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ  DP  K+ W ++CD+SR++FQK+YDRL+VTL E GESFY   +   +  L + GL+ 
Sbjct: 548 LQSGDPACKEVWTLLCDISRKEFQKVYDRLDVTLEEHGESFYNDMIPSTIDMLAEAGLVS 607

Query: 379 LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            DDG  I+  E   + P+ + K DGGF YD++D+ AIR R++  K DWI+ +TD
Sbjct: 608 RDDGADIVRLE-HFTYPLIVRKRDGGFGYDSTDMTAIRYRLKTLKCDWIIGITD 660



 Score =  318 bits (814), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 175/403 (43%), Positives = 251/403 (62%), Gaps = 24/403 (5%)

Query: 1050 AEATAKVMKKCFDILNIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLS 1109
            AEAT+ + K    +L     + E    +  +S+I + TK A+K +++    +  ++  L 
Sbjct: 279  AEATSTLAK----VLAYAQRVGEMPACKQAASTIDTFTK-ASKGVSL----KAGLQASLL 329

Query: 1110 DVFTHAVQVAFPELGDKTASVASTNEKYV--HKFGDFQCNDAMALCKIFKDK-GEKKNPF 1166
             +F  A+  A+P    K+A + S++ +    +K GDFQCN AMAL K  K   G   +P 
Sbjct: 330  AMFDAAMFKAWPLA--KSAGITSSSVRKCADYKNGDFQCNAAMALFKALKGGDGAPSSP- 386

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 1226
               Q+ AS + + L  NP    ++D   V+  G++N+ L   +  + I  +I NG  PP 
Sbjct: 387  ---QAAASAIVASLPVNP----LVDTTSVSPQGYINIRLRPAFINQSIAKVIKNGPAPPE 439

Query: 1227 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
            + KK+RV+VDFSSPNIAKEMHVGHLRSTIIG+ I R+LE+ GH V R NHVGDWGTQFGM
Sbjct: 440  V-KKMRVVVDFSSPNIAKEMHVGHLRSTIIGEAICRVLEFCGHTVFRHNHVGDWGTQFGM 498

Query: 1287 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 1346
            LI ++++ +P++LT  P I DL  FYK +K RFDE E FK+ +   VV LQ  DP  K+ 
Sbjct: 499  LINYMKEAYPNFLTDPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPACKEV 558

Query: 1347 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 1406
            W ++CD+SR++FQK+YDRL+VTL E GESFY   +   +  L + GL+  DDG  I+  E
Sbjct: 559  WTLLCDISRKEFQKVYDRLDVTLEEHGESFYNDMIPSTIDMLAEAGLVSRDDGADIVRLE 618

Query: 1407 DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
               + P+ + K DGGF YD++D+ AIR R++  K DWI+ +TD
Sbjct: 619  -HFTYPLIVRKRDGGFGYDSTDMTAIRYRLKTLKCDWIIGITD 660


>gi|349603011|gb|AEP98973.1| Arginyl-tRNA synthetase, cytoplasmic-like protein, partial [Equus
           caballus]
          Length = 476

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/421 (57%), Positives = 318/421 (75%), Gaps = 12/421 (2%)

Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
           +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 67  ININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQMLKSKEQ 123

Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
           K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 124 KVNPREIAENI----TKHLPGN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 175

Query: 595 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
           VQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH+GDWG
Sbjct: 176 VQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWG 235

Query: 655 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
           TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 236 TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNP 295

Query: 715 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
           D  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 296 DITKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRK 355

Query: 775 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
           I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ VH + +  
Sbjct: 356 IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHLQTIFA 414

Query: 835 CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
            A+  G  +P  TR+   GFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DKL++K 
Sbjct: 415 AAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLREKE 474

Query: 895 R 895
           R
Sbjct: 475 R 475



 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/441 (50%), Positives = 303/441 (68%), Gaps = 39/441 (8%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   +++++L   G +  S   + L  +  N KLK+RL IL++++  E  +  + 
Sbjct: 10  QEKEIKSLTAEIDQLKNCGCLEASPNLEQLREE--NLKLKYRLNILRKSLQAERNRPTM- 66

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                                +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 67  ---------------------ININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---K 102

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K NP +IA++I    T  L  N    + I+K+E+A PGF
Sbjct: 103 FGDYQCNSAMGISQMLKSKEQKVNPREIAENI----TKHLPGN----ECIEKVEIAGPGF 154

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 155 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESM 214

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            RL E+ G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 215 CRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 274

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            +E FKKRAYQCVV LQ  +PD  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  
Sbjct: 275 TEEEFKKRAYQCVVLLQSKNPDITKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDR 334

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M  +V   E +G +++DDGRKI++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 335 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 393

Query: 424 ADWIVYVTDH-RSYHQVLQAI 443
           AD I+YV D+ +S H  LQ I
Sbjct: 394 ADMIIYVVDNGQSVH--LQTI 412



 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/354 (57%), Positives = 267/354 (75%), Gaps = 13/354 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 67   ININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQMLKSKEQ 123

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 124  KVNPREIAENI----TKHLPGN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 175

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            VQ P L +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH+GDWG
Sbjct: 176  VQLPALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWG 235

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 236  TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNP 295

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D  KAW++ICDVSR++F KIYD L+++L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 296  DITKAWKLICDVSRQEFNKIYDALDISLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRK 355

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH 1454
            I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S H
Sbjct: 356  IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVH 408


>gi|226509531|ref|NP_001141350.1| uncharacterized protein LOC100273441 [Zea mays]
 gi|194704118|gb|ACF86143.1| unknown [Zea mays]
 gi|413944550|gb|AFW77199.1| arginyl-tRNA synthetase isoform 1 [Zea mays]
 gi|413944551|gb|AFW77200.1| arginyl-tRNA synthetase isoform 2 [Zea mays]
          Length = 604

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/566 (46%), Positives = 366/566 (64%), Gaps = 32/566 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
            KF D+QCN+AM L    K  G   KNP  I Q+IA  + S        + +I+   VA P
Sbjct: 53   KFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPS--------SDIIESTSVAGP 104

Query: 572  GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            GFVN+ LS  +  ++I+D++VNG++   P L  K R ++DFSSPNIAKEMHVGHLRSTII
Sbjct: 105  GFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPVK-RAVIDFSSPNIAKEMHVGHLRSTII 163

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 688
            GDT++R+ E+   DV+R NHVGDWGTQFGMLI +L +KFP++    S  I DLQ FYK S
Sbjct: 164  GDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKAS 223

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 748
            K RFD D  FK RA Q VV LQ  +  Y++AW+ ICD+SR +F  +Y RLNV L E+GES
Sbjct: 224  KHRFDNDPEFKARAQQGVVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGES 283

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 808
            FY  ++ Q++  L  KGL++  +G ++++ +    IP+ +VKSDGGF Y ++DLAA+  R
Sbjct: 284  FYNPYIPQVLEELSSKGLIKESEGARVIFIQGH-QIPLIVVKSDGGFNYASTDLAALWYR 342

Query: 809  IEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL-NPNKTRM---DFVGFGVVLGEDRKK 864
            +  E+A+WI+YVTD+GQ  HF +    AK AG L  PN+ +      VGFG+VLG D K+
Sbjct: 343  LNVEQAEWIIYVTDVGQQQHFDMFFSAAKMAGWLPGPNEKKFPKTSHVGFGLVLGSDGKR 402

Query: 865  FKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            F+TRS + V+L ELLDE   RS    L +L +  +  + T  EL +  +AV YG +KYAD
Sbjct: 403  FRTRSTEVVRLVELLDEAKSRSKSELLQRLTENGKIVDWTDEELEQTSEAVGYGAVKYAD 462

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            L +NR  +Y FSF++ML D+GNTAVYL YA+ RI SI R +  + EDL++      +SL+
Sbjct: 463  LKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEDLKMTG---AISLD 519

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
            H  E  L   L+R  +V+     +L  + +CEYLY++S  F++FY NC  +    E    
Sbjct: 520  HPDERVLGLYLIRFAEVVEEACTNLLPNVVCEYLYNLSEMFTKFYTNCQVVGSPEE---- 575

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNI 1066
               T RLLL +ATA VM++CF++L I
Sbjct: 576  ---TSRLLLCQATAVVMRQCFNLLGI 598



 Score =  312 bits (799), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 158/314 (50%), Positives = 214/314 (68%), Gaps = 14/314 (4%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
           KF D+QCN+AM L    K  G   KNP  I Q+IA  + S        + +I+   VA P
Sbjct: 53  KFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPS--------SDIIESTSVAGP 104

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           GFVN+ LS  +  ++I+D++VNG++   P L  K R ++DFSSPNIAKEMHVGHLRSTII
Sbjct: 105 GFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPVK-RAVIDFSSPNIAKEMHVGHLRSTII 163

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 298
           GDT++R+ E+   DV+R NHVGDWGTQFGMLI +L +KFP++    S  I DLQ FYK S
Sbjct: 164 GDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKAS 223

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 358
           K RFD D  FK RA Q VV LQ  +  Y++AW+ ICD+SR +F  +Y RLNV L E+GES
Sbjct: 224 KHRFDNDPEFKARAQQGVVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGES 283

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 418
           FY  ++ Q++  L  KGL++  +G ++++ +    IP+ +VKSDGGF Y ++DLAA+  R
Sbjct: 284 FYNPYIPQVLEELSSKGLIKESEGARVIFIQGH-QIPLIVVKSDGGFNYASTDLAALWYR 342

Query: 419 IEEEKADWIVYVTD 432
           +  E+A+WI+YVTD
Sbjct: 343 LNVEQAEWIIYVTD 356



 Score =  312 bits (799), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 158/314 (50%), Positives = 214/314 (68%), Gaps = 14/314 (4%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
            KF D+QCN+AM L    K  G   KNP  I Q+IA  + S        + +I+   VA P
Sbjct: 53   KFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPS--------SDIIESTSVAGP 104

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            GFVN+ LS  +  ++I+D++VNG++   P L  K R ++DFSSPNIAKEMHVGHLRSTII
Sbjct: 105  GFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPVK-RAVIDFSSPNIAKEMHVGHLRSTII 163

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 1315
            GDT++R+ E+   DV+R NHVGDWGTQFGMLI +L +KFP++    S  I DLQ FYK S
Sbjct: 164  GDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKAS 223

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 1375
            K RFD D  FK RA Q VV LQ  +  Y++AW+ ICD+SR +F  +Y RLNV L E+GES
Sbjct: 224  KHRFDNDPEFKARAQQGVVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGES 283

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 1435
            FY  ++ Q++  L  KGL++  +G ++++ +    IP+ +VKSDGGF Y ++DLAA+  R
Sbjct: 284  FYNPYIPQVLEELSSKGLIKESEGARVIFIQGH-QIPLIVVKSDGGFNYASTDLAALWYR 342

Query: 1436 IEEEKADWIVYVTD 1449
            +  E+A+WI+YVTD
Sbjct: 343  LNVEQAEWIIYVTD 356


>gi|413944553|gb|AFW77202.1| arginyl-tRNA synthetase [Zea mays]
          Length = 654

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/566 (46%), Positives = 366/566 (64%), Gaps = 32/566 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
            KF D+QCN+AM L    K  G   KNP  I Q+IA  + S        + +I+   VA P
Sbjct: 103  KFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPS--------SDIIESTSVAGP 154

Query: 572  GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            GFVN+ LS  +  ++I+D++VNG++   P L  K R ++DFSSPNIAKEMHVGHLRSTII
Sbjct: 155  GFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPVK-RAVIDFSSPNIAKEMHVGHLRSTII 213

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 688
            GDT++R+ E+   DV+R NHVGDWGTQFGMLI +L +KFP++    S  I DLQ FYK S
Sbjct: 214  GDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKAS 273

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 748
            K RFD D  FK RA Q VV LQ  +  Y++AW+ ICD+SR +F  +Y RLNV L E+GES
Sbjct: 274  KHRFDNDPEFKARAQQGVVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGES 333

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 808
            FY  ++ Q++  L  KGL++  +G ++++ +    IP+ +VKSDGGF Y ++DLAA+  R
Sbjct: 334  FYNPYIPQVLEELSSKGLIKESEGARVIFIQGH-QIPLIVVKSDGGFNYASTDLAALWYR 392

Query: 809  IEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL-NPNKTRM---DFVGFGVVLGEDRKK 864
            +  E+A+WI+YVTD+GQ  HF +    AK AG L  PN+ +      VGFG+VLG D K+
Sbjct: 393  LNVEQAEWIIYVTDVGQQQHFDMFFSAAKMAGWLPGPNEKKFPKTSHVGFGLVLGSDGKR 452

Query: 865  FKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            F+TRS + V+L ELLDE   RS    L +L +  +  + T  EL +  +AV YG +KYAD
Sbjct: 453  FRTRSTEVVRLVELLDEAKSRSKSELLQRLTENGKIVDWTDEELEQTSEAVGYGAVKYAD 512

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            L +NR  +Y FSF++ML D+GNTAVYL YA+ RI SI R +  + EDL++      +SL+
Sbjct: 513  LKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEDLKMTG---AISLD 569

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
            H  E  L   L+R  +V+     +L  + +CEYLY++S  F++FY NC  +    E    
Sbjct: 570  HPDERVLGLYLIRFAEVVEEACTNLLPNVVCEYLYNLSEMFTKFYTNCQVVGSPEE---- 625

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNI 1066
               T RLLL +ATA VM++CF++L I
Sbjct: 626  ---TSRLLLCQATAVVMRQCFNLLGI 648



 Score =  312 bits (800), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 158/314 (50%), Positives = 214/314 (68%), Gaps = 14/314 (4%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
           KF D+QCN+AM L    K  G   KNP  I Q+IA  + S        + +I+   VA P
Sbjct: 103 KFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPS--------SDIIESTSVAGP 154

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           GFVN+ LS  +  ++I+D++VNG++   P L  K R ++DFSSPNIAKEMHVGHLRSTII
Sbjct: 155 GFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPVK-RAVIDFSSPNIAKEMHVGHLRSTII 213

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 298
           GDT++R+ E+   DV+R NHVGDWGTQFGMLI +L +KFP++    S  I DLQ FYK S
Sbjct: 214 GDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKAS 273

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 358
           K RFD D  FK RA Q VV LQ  +  Y++AW+ ICD+SR +F  +Y RLNV L E+GES
Sbjct: 274 KHRFDNDPEFKARAQQGVVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGES 333

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 418
           FY  ++ Q++  L  KGL++  +G ++++ +    IP+ +VKSDGGF Y ++DLAA+  R
Sbjct: 334 FYNPYIPQVLEELSSKGLIKESEGARVIFIQGH-QIPLIVVKSDGGFNYASTDLAALWYR 392

Query: 419 IEEEKADWIVYVTD 432
           +  E+A+WI+YVTD
Sbjct: 393 LNVEQAEWIIYVTD 406



 Score =  312 bits (800), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 158/314 (50%), Positives = 214/314 (68%), Gaps = 14/314 (4%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
            KF D+QCN+AM L    K  G   KNP  I Q+IA  + S        + +I+   VA P
Sbjct: 103  KFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPS--------SDIIESTSVAGP 154

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            GFVN+ LS  +  ++I+D++VNG++   P L  K R ++DFSSPNIAKEMHVGHLRSTII
Sbjct: 155  GFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPVK-RAVIDFSSPNIAKEMHVGHLRSTII 213

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 1315
            GDT++R+ E+   DV+R NHVGDWGTQFGMLI +L +KFP++    S  I DLQ FYK S
Sbjct: 214  GDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKAS 273

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 1375
            K RFD D  FK RA Q VV LQ  +  Y++AW+ ICD+SR +F  +Y RLNV L E+GES
Sbjct: 274  KHRFDNDPEFKARAQQGVVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGES 333

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 1435
            FY  ++ Q++  L  KGL++  +G ++++ +    IP+ +VKSDGGF Y ++DLAA+  R
Sbjct: 334  FYNPYIPQVLEELSSKGLIKESEGARVIFIQGH-QIPLIVVKSDGGFNYASTDLAALWYR 392

Query: 1436 IEEEKADWIVYVTD 1449
            +  E+A+WI+YVTD
Sbjct: 393  LNVEQAEWIIYVTD 406


>gi|413944552|gb|AFW77201.1| hypothetical protein ZEAMMB73_220224 [Zea mays]
          Length = 653

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/566 (46%), Positives = 366/566 (64%), Gaps = 32/566 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
            KF D+QCN+AM L    K  G   KNP  I Q+IA  + S        + +I+   VA P
Sbjct: 102  KFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPS--------SDIIESTSVAGP 153

Query: 572  GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            GFVN+ LS  +  ++I+D++VNG++   P L  K R ++DFSSPNIAKEMHVGHLRSTII
Sbjct: 154  GFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPVK-RAVIDFSSPNIAKEMHVGHLRSTII 212

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 688
            GDT++R+ E+   DV+R NHVGDWGTQFGMLI +L +KFP++    S  I DLQ FYK S
Sbjct: 213  GDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKAS 272

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 748
            K RFD D  FK RA Q VV LQ  +  Y++AW+ ICD+SR +F  +Y RLNV L E+GES
Sbjct: 273  KHRFDNDPEFKARAQQGVVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGES 332

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 808
            FY  ++ Q++  L  KGL++  +G ++++ +    IP+ +VKSDGGF Y ++DLAA+  R
Sbjct: 333  FYNPYIPQVLEELSSKGLIKESEGARVIFIQGH-QIPLIVVKSDGGFNYASTDLAALWYR 391

Query: 809  IEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL-NPNKTRM---DFVGFGVVLGEDRKK 864
            +  E+A+WI+YVTD+GQ  HF +    AK AG L  PN+ +      VGFG+VLG D K+
Sbjct: 392  LNVEQAEWIIYVTDVGQQQHFDMFFSAAKMAGWLPGPNEKKFPKTSHVGFGLVLGSDGKR 451

Query: 865  FKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            F+TRS + V+L ELLDE   RS    L +L +  +  + T  EL +  +AV YG +KYAD
Sbjct: 452  FRTRSTEVVRLVELLDEAKSRSKSELLQRLTENGKIVDWTDEELEQTSEAVGYGAVKYAD 511

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            L +NR  +Y FSF++ML D+GNTAVYL YA+ RI SI R +  + EDL++      +SL+
Sbjct: 512  LKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEDLKMTG---AISLD 568

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
            H  E  L   L+R  +V+     +L  + +CEYLY++S  F++FY NC  +    E    
Sbjct: 569  HPDERVLGLYLIRFAEVVEEACTNLLPNVVCEYLYNLSEMFTKFYTNCQVVGSPEE---- 624

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNI 1066
               T RLLL +ATA VM++CF++L I
Sbjct: 625  ---TSRLLLCQATAVVMRQCFNLLGI 647



 Score =  312 bits (800), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 158/314 (50%), Positives = 214/314 (68%), Gaps = 14/314 (4%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
           KF D+QCN+AM L    K  G   KNP  I Q+IA  + S        + +I+   VA P
Sbjct: 102 KFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPS--------SDIIESTSVAGP 153

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           GFVN+ LS  +  ++I+D++VNG++   P L  K R ++DFSSPNIAKEMHVGHLRSTII
Sbjct: 154 GFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPVK-RAVIDFSSPNIAKEMHVGHLRSTII 212

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 298
           GDT++R+ E+   DV+R NHVGDWGTQFGMLI +L +KFP++    S  I DLQ FYK S
Sbjct: 213 GDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKAS 272

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 358
           K RFD D  FK RA Q VV LQ  +  Y++AW+ ICD+SR +F  +Y RLNV L E+GES
Sbjct: 273 KHRFDNDPEFKARAQQGVVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGES 332

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 418
           FY  ++ Q++  L  KGL++  +G ++++ +    IP+ +VKSDGGF Y ++DLAA+  R
Sbjct: 333 FYNPYIPQVLEELSSKGLIKESEGARVIFIQGH-QIPLIVVKSDGGFNYASTDLAALWYR 391

Query: 419 IEEEKADWIVYVTD 432
           +  E+A+WI+YVTD
Sbjct: 392 LNVEQAEWIIYVTD 405



 Score =  312 bits (800), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 158/314 (50%), Positives = 214/314 (68%), Gaps = 14/314 (4%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
            KF D+QCN+AM L    K  G   KNP  I Q+IA  + S        + +I+   VA P
Sbjct: 102  KFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPS--------SDIIESTSVAGP 153

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            GFVN+ LS  +  ++I+D++VNG++   P L  K R ++DFSSPNIAKEMHVGHLRSTII
Sbjct: 154  GFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPVK-RAVIDFSSPNIAKEMHVGHLRSTII 212

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 1315
            GDT++R+ E+   DV+R NHVGDWGTQFGMLI +L +KFP++    S  I DLQ FYK S
Sbjct: 213  GDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKAS 272

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 1375
            K RFD D  FK RA Q VV LQ  +  Y++AW+ ICD+SR +F  +Y RLNV L E+GES
Sbjct: 273  KHRFDNDPEFKARAQQGVVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGES 332

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 1435
            FY  ++ Q++  L  KGL++  +G ++++ +    IP+ +VKSDGGF Y ++DLAA+  R
Sbjct: 333  FYNPYIPQVLEELSSKGLIKESEGARVIFIQGH-QIPLIVVKSDGGFNYASTDLAALWYR 391

Query: 1436 IEEEKADWIVYVTD 1449
            +  E+A+WI+YVTD
Sbjct: 392  LNVEQAEWIIYVTD 405


>gi|255546293|ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus communis]
 gi|223546662|gb|EEF48160.1| arginyl-tRNA synthetase, putative [Ricinus communis]
          Length = 592

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 268/599 (44%), Positives = 387/599 (64%), Gaps = 33/599 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG-E 534
            +++  ++ +F  +++   P   D    VA+       KFGD+QCN+AM+L    K K  E
Sbjct: 13   NLKKQIAKLFEASLRETVPSEPDVEPLVAAC----TAKFGDYQCNNAMSLWSKIKGKNTE 68

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             K P  + Q+I          N   ++VI+   VA PGFVNV LS+ +  ++I+ ++++G
Sbjct: 69   FKGPPAVGQAIMK--------NLPPSEVIESCSVAGPGFVNVVLSKKWMSKKIQKMLIDG 120

Query: 595  V---QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
            +    P  L K  R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVG
Sbjct: 121  IDSWAPKLLVK--RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSKVDVLRRNHVG 178

Query: 652  DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            DWGTQFGMLI  L +KFP++       I DLQAFYK SK+RFD D  FK+RA + VV LQ
Sbjct: 179  DWGTQFGMLIEFLFEKFPNFEDVNERAIGDLQAFYKASKQRFDADSEFKERAQKAVVRLQ 238

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              +P Y++AW  ICD+SR++F K+Y RL V L E+GESFY  ++  ++  L  +GL+E  
Sbjct: 239  GGEPKYRQAWAQICDISRKEFDKVYQRLGVQLEEKGESFYNPYIPGIIDALSNQGLVEES 298

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            +G ++++ E   +IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD+GQ  HF 
Sbjct: 299  EGARVIFIEGV-NIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQQHFD 357

Query: 831  LLEECAKKAGILNPNKT---RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            ++ + AK+A  L  + +   +   VGFG+VLG+D K+F+TR+ + V+L +LLDE   RS 
Sbjct: 358  MVFKAAKRASWLPADDSMFPKASHVGFGLVLGDDGKRFRTRATEVVRLVDLLDEAKTRSK 417

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
              L ++ +  E T  EL +  +A+ YG +KYADL +NR  +Y F++D+ML+D+GNTAVYL
Sbjct: 418  AVLVERGKAEEWTEQELEQIAEAIGYGAVKYADLKNNRLTNYTFNYDQMLNDKGNTAVYL 477

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+ RI SI R +G + E+L+   +   + L+H  E +L   LL+  + +     +L  
Sbjct: 478  LYAHARICSIIRKSGRDMEELK---KMGSLVLDHPDERSLGLHLLQFAETVEEACTNLLP 534

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            + LCEYLY++S  F++FY NC  +E   E       T RLLL EATA VM+KCF +L I
Sbjct: 535  NVLCEYLYNLSEYFTKFYSNCKVVESPEE-------TSRLLLCEATAVVMRKCFFLLGI 586



 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 164/352 (46%), Positives = 232/352 (65%), Gaps = 20/352 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG-E 144
           +++  ++ +F  +++   P   D    VA+       KFGD+QCN+AM+L    K K  E
Sbjct: 13  NLKKQIAKLFEASLRETVPSEPDVEPLVAAC----TAKFGDYQCNNAMSLWSKIKGKNTE 68

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            K P  + Q+I          N   ++VI+   VA PGFVNV LS+ +  ++I+ ++++G
Sbjct: 69  FKGPPAVGQAIMK--------NLPPSEVIESCSVAGPGFVNVVLSKKWMSKKIQKMLIDG 120

Query: 205 V---QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
           +    P  L K  R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVG
Sbjct: 121 IDSWAPKLLVK--RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSKVDVLRRNHVG 178

Query: 262 DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           DWGTQFGMLI  L +KFP++       I DLQAFYK SK+RFD D  FK+RA + VV LQ
Sbjct: 179 DWGTQFGMLIEFLFEKFPNFEDVNERAIGDLQAFYKASKQRFDADSEFKERAQKAVVRLQ 238

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             +P Y++AW  ICD+SR++F K+Y RL V L E+GESFY  ++  ++  L  +GL+E  
Sbjct: 239 GGEPKYRQAWAQICDISRKEFDKVYQRLGVQLEEKGESFYNPYIPGIIDALSNQGLVEES 298

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +G ++++ E   +IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD
Sbjct: 299 EGARVIFIEGV-NIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTD 349



 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 164/352 (46%), Positives = 232/352 (65%), Gaps = 20/352 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG-E 1161
            +++  ++ +F  +++   P   D    VA+       KFGD+QCN+AM+L    K K  E
Sbjct: 13   NLKKQIAKLFEASLRETVPSEPDVEPLVAAC----TAKFGDYQCNNAMSLWSKIKGKNTE 68

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             K P  + Q+I          N   ++VI+   VA PGFVNV LS+ +  ++I+ ++++G
Sbjct: 69   FKGPPAVGQAIMK--------NLPPSEVIESCSVAGPGFVNVVLSKKWMSKKIQKMLIDG 120

Query: 1222 V---QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
            +    P  L K  R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVG
Sbjct: 121  IDSWAPKLLVK--RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSKVDVLRRNHVG 178

Query: 1279 DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            DWGTQFGMLI  L +KFP++       I DLQAFYK SK+RFD D  FK+RA + VV LQ
Sbjct: 179  DWGTQFGMLIEFLFEKFPNFEDVNERAIGDLQAFYKASKQRFDADSEFKERAQKAVVRLQ 238

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              +P Y++AW  ICD+SR++F K+Y RL V L E+GESFY  ++  ++  L  +GL+E  
Sbjct: 239  GGEPKYRQAWAQICDISRKEFDKVYQRLGVQLEEKGESFYNPYIPGIIDALSNQGLVEES 298

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +G ++++ E   +IP+ +VKSDGGF Y ++DL A+  R+ EEKA+WI+YVTD
Sbjct: 299  EGARVIFIEGV-NIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTD 349


>gi|15219682|ref|NP_176826.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|12322268|gb|AAG51163.1|AC074025_13 arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|14030685|gb|AAK53017.1|AF375433_1 At1g66530/F28G11_14 [Arabidopsis thaliana]
 gi|20334712|gb|AAM16217.1| At1g66530/F28G11_14 [Arabidopsis thaliana]
 gi|332196400|gb|AEE34521.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 590

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/562 (47%), Positives = 376/562 (66%), Gaps = 29/562 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQS-IASVVTSELATNPSLAKVIDKIEVAK 570
            KFGD+QCN+AM L  + K KG + + P  + Q+ I S+ TSE+         ++   +A 
Sbjct: 44   KFGDYQCNNAMGLWSLIKGKGTQFRGPPAVGQALIQSLPTSEM---------VESCSIAG 94

Query: 571  PGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            PGFVNV LS  +  + I++++V+G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 95   PGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTI 153

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS-PPIADLQAFYKE 687
            IGDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD  + +   I DLQ FY+E
Sbjct: 154  IGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTESVTETAIGDLQVFYRE 213

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            SK +FD +  FK++A Q VV LQ  DP Y++AW  IC++SR +F K+Y RL + L E+GE
Sbjct: 214  SKLKFDLNPEFKEKAQQAVVRLQGGDPVYRQAWAKICEISRNEFAKVYKRLRIELEEKGE 273

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 807
            SFY  ++  ++  L  KGL+E   G ++++ E    IP+ +VKSDGGF Y ++DL A+  
Sbjct: 274  SFYNPYIANVIEELSSKGLVEESKGARVIFIEGF-KIPLIVVKSDGGFNYASTDLTALWY 332

Query: 808  RIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL-NPNKT--RMDFVGFGVVLGEDRKK 864
            R+ EEKA+WI+YVTD+GQ  HF +  + A+KAG L + +KT  R+  VGFG+VLG+D K+
Sbjct: 333  RLNEEKAEWIIYVTDVGQQQHFDMFFKAARKAGWLPDDDKTYPRVSHVGFGLVLGDDNKR 392

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            F+TR+ + V+L++LLDE   RS   L ++ +  E +P EL +  +AV YG +KYADL  N
Sbjct: 393  FRTRAAEVVRLADLLDEAKDRSKAALIERGKDKEWSPEELDQIAEAVGYGALKYADLKTN 452

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R   Y FSFD+ML+D+G+TAVYLLYA+ RI SI R +G + ++L+   ++  ++L+H  E
Sbjct: 453  RITGYTFSFDQMLNDKGDTAVYLLYAHARICSIIRKSGKDIDELK---KTGKIALDHAAE 509

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +      L  + LC+YLY +S  F++FY NC  +   AE       T
Sbjct: 510  RALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSNCQ-VNGSAE------ET 562

Query: 1045 GRLLLAEATAKVMKKCFDILNI 1066
             RLLL EATA VM+KCF +L I
Sbjct: 563  SRLLLCEATAIVMRKCFHLLGI 584



 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/315 (50%), Positives = 218/315 (69%), Gaps = 16/315 (5%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQS-IASVVTSELATNPSLAKVIDKIEVAK 180
           KFGD+QCN+AM L  + K KG + + P  + Q+ I S+ TSE+         ++   +A 
Sbjct: 44  KFGDYQCNNAMGLWSLIKGKGTQFRGPPAVGQALIQSLPTSEM---------VESCSIAG 94

Query: 181 PGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           PGFVNV LS  +  + I++++V+G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 95  PGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTI 153

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS-PPIADLQAFYKE 297
           IGDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD  + +   I DLQ FY+E
Sbjct: 154 IGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTESVTETAIGDLQVFYRE 213

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           SK +FD +  FK++A Q VV LQ  DP Y++AW  IC++SR +F K+Y RL + L E+GE
Sbjct: 214 SKLKFDLNPEFKEKAQQAVVRLQGGDPVYRQAWAKICEISRNEFAKVYKRLRIELEEKGE 273

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 417
           SFY  ++  ++  L  KGL+E   G ++++ E    IP+ +VKSDGGF Y ++DL A+  
Sbjct: 274 SFYNPYIANVIEELSSKGLVEESKGARVIFIEGF-KIPLIVVKSDGGFNYASTDLTALWY 332

Query: 418 RIEEEKADWIVYVTD 432
           R+ EEKA+WI+YVTD
Sbjct: 333 RLNEEKAEWIIYVTD 347



 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/315 (50%), Positives = 218/315 (69%), Gaps = 16/315 (5%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQS-IASVVTSELATNPSLAKVIDKIEVAK 1197
            KFGD+QCN+AM L  + K KG + + P  + Q+ I S+ TSE+         ++   +A 
Sbjct: 44   KFGDYQCNNAMGLWSLIKGKGTQFRGPPAVGQALIQSLPTSEM---------VESCSIAG 94

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            PGFVNV LS  +  + I++++V+G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 95   PGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTI 153

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS-PPIADLQAFYKE 1314
            IGDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD  + +   I DLQ FY+E
Sbjct: 154  IGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTESVTETAIGDLQVFYRE 213

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            SK +FD +  FK++A Q VV LQ  DP Y++AW  IC++SR +F K+Y RL + L E+GE
Sbjct: 214  SKLKFDLNPEFKEKAQQAVVRLQGGDPVYRQAWAKICEISRNEFAKVYKRLRIELEEKGE 273

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 1434
            SFY  ++  ++  L  KGL+E   G ++++ E    IP+ +VKSDGGF Y ++DL A+  
Sbjct: 274  SFYNPYIANVIEELSSKGLVEESKGARVIFIEGF-KIPLIVVKSDGGFNYASTDLTALWY 332

Query: 1435 RIEEEKADWIVYVTD 1449
            R+ EEKA+WI+YVTD
Sbjct: 333  RLNEEKAEWIIYVTD 347


>gi|297841275|ref|XP_002888519.1| hypothetical protein ARALYDRAFT_475759 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297334360|gb|EFH64778.1| hypothetical protein ARALYDRAFT_475759 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 590

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/561 (47%), Positives = 373/561 (66%), Gaps = 27/561 (4%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
            KFGD+QCN+AM L    K KG + + P  + Q+        L  N   +++++   +A P
Sbjct: 44   KFGDYQCNNAMGLWSFIKGKGTQFRGPPAVGQA--------LIKNLPSSEMVESCSIAGP 95

Query: 572  GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            GFVNV LS  +  + I++++V+G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 96   GFVNVVLSAKWIAKSIENMLVDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTII 154

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKES 688
            GDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD        I DLQ FYK+S
Sbjct: 155  GDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTDSVTETAIGDLQMFYKKS 214

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 748
            K RFD D  FK++A Q VV LQ  DP Y+KAW  IC++SR +F K+Y RL V L E+GES
Sbjct: 215  KLRFDLDPEFKEKAQQAVVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGES 274

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 808
            FY  ++  ++  L  KGL+E ++G ++++ E   +IP+ +VKS+GGF Y ++DL A+  R
Sbjct: 275  FYNPYIANVIEELSSKGLVEENEGARVIFVEGF-NIPLMVVKSNGGFNYASTDLTALWYR 333

Query: 809  IEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL-NPNKT--RMDFVGFGVVLGEDRKKF 865
            + EEKA+WI+Y+TDLGQ  HF +  + A+KAG L + +KT  R++ VGFG+VLG D K+F
Sbjct: 334  LNEEKAEWIIYLTDLGQQQHFHMFFKAARKAGWLPDDDKTYPRVNHVGFGLVLGADNKRF 393

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            +TR+ + V+L +LLDE   RS   L ++ +  E TP EL +  +AV YG +K+ADL  NR
Sbjct: 394  RTRANEVVRLVDLLDEAKDRSKAALIERGKDKEWTPEELDQTAEAVGYGALKFADLKTNR 453

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
               Y FSFD+ML+D+G+TAVYLLYA+ RI SI R +G + ++L+   ++  ++L+H  E 
Sbjct: 454  LTGYTFSFDQMLNDKGDTAVYLLYAHARICSIIRKSGKDIDELK---RTGKIALDHAAER 510

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
            AL   LL+  + +      L  + LC+YLY +S  F++FY NC  +   AE       T 
Sbjct: 511  ALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSNCQ-VNGSAE------ETS 563

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RLLL EATA VM+KCF +L I
Sbjct: 564  RLLLCEATAIVMRKCFYLLGI 584



 Score =  309 bits (792), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 159/327 (48%), Positives = 221/327 (67%), Gaps = 17/327 (5%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
           KFGD+QCN+AM L    K KG + + P  + Q+        L  N   +++++   +A P
Sbjct: 44  KFGDYQCNNAMGLWSFIKGKGTQFRGPPAVGQA--------LIKNLPSSEMVESCSIAGP 95

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           GFVNV LS  +  + I++++V+G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 96  GFVNVVLSAKWIAKSIENMLVDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTII 154

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKES 298
           GDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD        I DLQ FYK+S
Sbjct: 155 GDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTDSVTETAIGDLQMFYKKS 214

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 358
           K RFD D  FK++A Q VV LQ  DP Y+KAW  IC++SR +F K+Y RL V L E+GES
Sbjct: 215 KLRFDLDPEFKEKAQQAVVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGES 274

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 418
           FY  ++  ++  L  KGL+E ++G ++++ E   +IP+ +VKS+GGF Y ++DL A+  R
Sbjct: 275 FYNPYIANVIEELSSKGLVEENEGARVIFVEGF-NIPLMVVKSNGGFNYASTDLTALWYR 333

Query: 419 IEEEKADWIVYVTD---HRSYHQVLQA 442
           + EEKA+WI+Y+TD    + +H   +A
Sbjct: 334 LNEEKAEWIIYLTDLGQQQHFHMFFKA 360



 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/314 (50%), Positives = 216/314 (68%), Gaps = 14/314 (4%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
            KFGD+QCN+AM L    K KG + + P  + Q+        L  N   +++++   +A P
Sbjct: 44   KFGDYQCNNAMGLWSFIKGKGTQFRGPPAVGQA--------LIKNLPSSEMVESCSIAGP 95

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            GFVNV LS  +  + I++++V+G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 96   GFVNVVLSAKWIAKSIENMLVDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTII 154

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKES 1315
            GDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD        I DLQ FYK+S
Sbjct: 155  GDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTDSVTETAIGDLQMFYKKS 214

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 1375
            K RFD D  FK++A Q VV LQ  DP Y+KAW  IC++SR +F K+Y RL V L E+GES
Sbjct: 215  KLRFDLDPEFKEKAQQAVVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGES 274

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 1435
            FY  ++  ++  L  KGL+E ++G ++++ E   +IP+ +VKS+GGF Y ++DL A+  R
Sbjct: 275  FYNPYIANVIEELSSKGLVEENEGARVIFVEGF-NIPLMVVKSNGGFNYASTDLTALWYR 333

Query: 1436 IEEEKADWIVYVTD 1449
            + EEKA+WI+Y+TD
Sbjct: 334  LNEEKAEWIIYLTD 347


>gi|115462265|ref|NP_001054732.1| Os05g0163000 [Oryza sativa Japonica Group]
 gi|46981337|gb|AAT07655.1| putative Arginyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113578283|dbj|BAF16646.1| Os05g0163000 [Oryza sativa Japonica Group]
 gi|222630303|gb|EEE62435.1| hypothetical protein OsJ_17227 [Oryza sativa Japonica Group]
          Length = 606

 Score =  498 bits (1282), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 273/603 (45%), Positives = 374/603 (62%), Gaps = 37/603 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            SV+  LS +   +++   PE+      V    E    KFGD+QCN+AM L    K  G  
Sbjct: 23   SVKQQLSKLVIASLRTTVPEV-----EVDPMVEVCTAKFGDYQCNNAMGLWSRIKGSGTS 77

Query: 536  -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             KNP  I Q+IA         N   + +I+   VA PGFVN+ LS  +  ++I+D++VNG
Sbjct: 78   FKNPNAIGQAIAK--------NLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQDMLVNG 129

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            ++   P L  K R ++DFSSPNIAKEMHVGHLRSTIIGDT++R+ E+   +V+R NHVGD
Sbjct: 130  IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGD 188

Query: 653  WGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            WGTQFGMLI +L +KFP++    S  I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 189  WGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQG 248

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             +  Y+ AW  IC++SR +F  +Y  LNV L E+GESFY   + Q++  L  KGL++  +
Sbjct: 249  GEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESE 308

Query: 772  GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            G K+++ E    IP+ +VK DGGF Y ++DLAA+  R+  EKA+WI+YVTD+GQ  HF +
Sbjct: 309  GAKVIFIEGH-QIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQQHFDM 367

Query: 832  LEECAKKAGILNPNK----TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS- 886
                A+ AG L   K     + + VGFG+VLG D K+F+TRS + V+L ELLDE   RS 
Sbjct: 368  FFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVRLIELLDEAKSRSK 427

Query: 887  ---LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
               L +L +  +  + T  EL +  +AV YG +KYADL +NR  +Y FSF++ML D+GNT
Sbjct: 428  SELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNT 487

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            AVYL YA+ RI SI R +  + E+L++   S  +SL+H  E  L   L+R  +V+     
Sbjct: 488  AVYLQYAHARICSIIRKSNKDVEELKM---SGAISLDHPDERVLGLYLIRFAEVVEEACT 544

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +L  + LCEYLY++S  F+ FY NC  +    E       T RLLL +ATA VM++CF++
Sbjct: 545  NLLPNVLCEYLYNLSEMFTRFYTNCQVVGSPEE-------TSRLLLCQATAVVMRQCFEL 597

Query: 1064 LNI 1066
            L I
Sbjct: 598  LGI 600



 Score =  310 bits (795), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 166/351 (47%), Positives = 223/351 (63%), Gaps = 19/351 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           SV+  LS +   +++   PE+      V    E    KFGD+QCN+AM L    K  G  
Sbjct: 23  SVKQQLSKLVIASLRTTVPEV-----EVDPMVEVCTAKFGDYQCNNAMGLWSRIKGSGTS 77

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            KNP  I Q+IA         N   + +I+   VA PGFVN+ LS  +  ++I+D++VNG
Sbjct: 78  FKNPNAIGQAIAK--------NLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQDMLVNG 129

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           ++   P L  K R ++DFSSPNIAKEMHVGHLRSTIIGDT++R+ E+   +V+R NHVGD
Sbjct: 130 IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGD 188

Query: 263 WGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           WGTQFGMLI +L +KFP++    S  I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 189 WGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQG 248

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            +  Y+ AW  IC++SR +F  +Y  LNV L E+GESFY   + Q++  L  KGL++  +
Sbjct: 249 GEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESE 308

Query: 382 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           G K+++ E    IP+ +VK DGGF Y ++DLAA+  R+  EKA+WI+YVTD
Sbjct: 309 GAKVIFIEGH-QIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTD 358



 Score =  310 bits (795), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 166/351 (47%), Positives = 223/351 (63%), Gaps = 19/351 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            SV+  LS +   +++   PE+      V    E    KFGD+QCN+AM L    K  G  
Sbjct: 23   SVKQQLSKLVIASLRTTVPEV-----EVDPMVEVCTAKFGDYQCNNAMGLWSRIKGSGTS 77

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             KNP  I Q+IA         N   + +I+   VA PGFVN+ LS  +  ++I+D++VNG
Sbjct: 78   FKNPNAIGQAIAK--------NLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQDMLVNG 129

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            ++   P L  K R ++DFSSPNIAKEMHVGHLRSTIIGDT++R+ E+   +V+R NHVGD
Sbjct: 130  IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGD 188

Query: 1280 WGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            WGTQFGMLI +L +KFP++    S  I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 189  WGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQG 248

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +  Y+ AW  IC++SR +F  +Y  LNV L E+GESFY   + Q++  L  KGL++  +
Sbjct: 249  GEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESE 308

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G K+++ E    IP+ +VK DGGF Y ++DLAA+  R+  EKA+WI+YVTD
Sbjct: 309  GAKVIFIEGH-QIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTD 358


>gi|297831814|ref|XP_002883789.1| hypothetical protein ARALYDRAFT_480296 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297329629|gb|EFH60048.1| hypothetical protein ARALYDRAFT_480296 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 590

 Score =  498 bits (1281), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/562 (47%), Positives = 373/562 (66%), Gaps = 29/562 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQS-IASVVTSELATNPSLAKVIDKIEVAK 570
            KFGD+QCN+AM L  I K KG + K P  + Q+ I S+ TSE+         ++   +A 
Sbjct: 44   KFGDYQCNNAMGLWSIIKGKGTQFKGPPAVGQALIKSLPTSEM---------VESCSIAG 94

Query: 571  PGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            PGFVNV LS  +  + I++++++G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 95   PGFVNVVLSAKWMAKSIENMLIDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTI 153

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKE 687
            IGDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD        I DLQ FYK+
Sbjct: 154  IGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTDSVTETAIGDLQMFYKK 213

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            SK +FD D  FK++A Q VV LQ  DP Y+KAW  IC++SR +F K+Y RL V L E+GE
Sbjct: 214  SKLKFDLDPEFKEKAQQAVVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGE 273

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 807
            SFY  ++  ++  L  KGL+E   G ++++ E   + P+ +VKSDGGF Y ++DL A+  
Sbjct: 274  SFYNPYIANVIEELSSKGLVEESKGARVIFIEGFKA-PLIVVKSDGGFNYASTDLTALWY 332

Query: 808  RIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL-NPNKT--RMDFVGFGVVLGEDRKK 864
            R+ EEKA+WI+Y+TD GQ  HF +  + A+KAG L + +KT  R++ VGFG+VLG+D K+
Sbjct: 333  RLNEEKAEWIIYLTDFGQQQHFHMFFKAARKAGWLPDDDKTYPRVNHVGFGLVLGDDNKR 392

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            F+TRS + V+L +LLDE   RS   L ++ +  E TP EL +  ++V YG +KYADL  N
Sbjct: 393  FRTRSTEVVRLVDLLDEAKDRSKAALIERGKDKEWTPEELDQTAESVGYGALKYADLKTN 452

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R   Y FSFD+ML+D+G+TAVYLLYA+ RI SI R +G + ++L+   ++  ++L+H  E
Sbjct: 453  RLTGYTFSFDQMLNDKGDTAVYLLYAHARICSIIRKSGKDIDELK---KTGKIALDHAAE 509

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +      L  + LC+YLY +S  F++FY +C  +   AE       T
Sbjct: 510  RALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSSCQ-VNGSAE------ET 562

Query: 1045 GRLLLAEATAKVMKKCFDILNI 1066
             RLLL EATA VM+KCF +L I
Sbjct: 563  SRLLLCEATAIVMRKCFHLLGI 584



 Score =  309 bits (792), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 162/328 (49%), Positives = 221/328 (67%), Gaps = 19/328 (5%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQS-IASVVTSELATNPSLAKVIDKIEVAK 180
           KFGD+QCN+AM L  I K KG + K P  + Q+ I S+ TSE+         ++   +A 
Sbjct: 44  KFGDYQCNNAMGLWSIIKGKGTQFKGPPAVGQALIKSLPTSEM---------VESCSIAG 94

Query: 181 PGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           PGFVNV LS  +  + I++++++G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 95  PGFVNVVLSAKWMAKSIENMLIDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTI 153

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKE 297
           IGDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD        I DLQ FYK+
Sbjct: 154 IGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTDSVTETAIGDLQMFYKK 213

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           SK +FD D  FK++A Q VV LQ  DP Y+KAW  IC++SR +F K+Y RL V L E+GE
Sbjct: 214 SKLKFDLDPEFKEKAQQAVVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGE 273

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 417
           SFY  ++  ++  L  KGL+E   G ++++ E   + P+ +VKSDGGF Y ++DL A+  
Sbjct: 274 SFYNPYIANVIEELSSKGLVEESKGARVIFIEGFKA-PLIVVKSDGGFNYASTDLTALWY 332

Query: 418 RIEEEKADWIVYVTD---HRSYHQVLQA 442
           R+ EEKA+WI+Y+TD    + +H   +A
Sbjct: 333 RLNEEKAEWIIYLTDFGQQQHFHMFFKA 360



 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 160/315 (50%), Positives = 216/315 (68%), Gaps = 16/315 (5%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQS-IASVVTSELATNPSLAKVIDKIEVAK 1197
            KFGD+QCN+AM L  I K KG + K P  + Q+ I S+ TSE+         ++   +A 
Sbjct: 44   KFGDYQCNNAMGLWSIIKGKGTQFKGPPAVGQALIKSLPTSEM---------VESCSIAG 94

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            PGFVNV LS  +  + I++++++G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 95   PGFVNVVLSAKWMAKSIENMLIDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTI 153

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKE 1314
            IGDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD        I DLQ FYK+
Sbjct: 154  IGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTDSVTETAIGDLQMFYKK 213

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            SK +FD D  FK++A Q VV LQ  DP Y+KAW  IC++SR +F K+Y RL V L E+GE
Sbjct: 214  SKLKFDLDPEFKEKAQQAVVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGE 273

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 1434
            SFY  ++  ++  L  KGL+E   G ++++ E   + P+ +VKSDGGF Y ++DL A+  
Sbjct: 274  SFYNPYIANVIEELSSKGLVEESKGARVIFIEGFKA-PLIVVKSDGGFNYASTDLTALWY 332

Query: 1435 RIEEEKADWIVYVTD 1449
            R+ EEKA+WI+Y+TD
Sbjct: 333  RLNEEKAEWIIYLTD 347


>gi|428179188|gb|EKX48060.1| hypothetical protein GUITHDRAFT_159514 [Guillardia theta CCMP2712]
          Length = 615

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 270/603 (44%), Positives = 371/603 (61%), Gaps = 46/603 (7%)

Query: 484  VFTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDK------ 532
            +F  A+  AFP + +         V +T++    K GD+QCN AMA+ KI KDK      
Sbjct: 33   LFEKAIAQAFPIVPESLEKSRWLVVQATSDA---KHGDYQCNSAMAIHKILKDKVVSHAL 89

Query: 533  ----GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 588
                   K P D++  I   +           KV+ K E+A PGF+N+FL   +  E   
Sbjct: 90   AGVADAPKAPRDVSARIVECIPKN--------KVLLKTEIAGPGFINIFLDPAFIAESFA 141

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I+ NG QPP  ++   V+VDFSSPNIAKEMHVGHLRSTIIG++I R+LE+ GH V R+N
Sbjct: 142  KILKNGPQPPA-SQPQEVVVDFSSPNIAKEMHVGHLRSTIIGESICRVLEFCGHRVHRIN 200

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLI HL+  +P++  + P I+DL  FYKE+KKRFDED  FK+ +   VV 
Sbjct: 201  HVGDWGTQFGMLINHLRTAYPNFHEQPPNISDLTTFYKEAKKRFDEDAEFKEASRTSVVT 260

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLL 767
            LQ  DP   + W+ +CDVSR  FQ +YDRL    L E+GESFY   +  +V  L  KG++
Sbjct: 261  LQAGDPYSLQCWKALCDVSRIQFQMVYDRLECAGLVEQGESFYNSRIPDVVKELTAKGMV 320

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            E  DG KI+  +     P+  VKSDGG+ YD++DL A++ R++E KAD ++YVTD GQ  
Sbjct: 321  EESDGAKII--QCGKQFPLMAVKSDGGYGYDSTDLTAVKYRLQEMKADRVIYVTDAGQSE 378

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF ++   AK+AG       R+D V FG+VLG+D+KKFKTRSG+  KL +LLDE + RSL
Sbjct: 379  HFEMIFHAAKRAGWCE-GGARLDHVPFGLVLGDDKKKFKTRSGEVTKLVDLLDEAVTRSL 437

Query: 888  DKLKDK----NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
              L+++       T++   +L EA + + YGC+KYADL  +R  DY FS+DKMLD +GNT
Sbjct: 438  THLRERMNTEGSTTQMAEGDLEEASRRIGYGCVKYADLRQHRISDYQFSYDKMLDLKGNT 497

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            AVYL+Y+Y RI SI   AG+  +DL   A   P S++H KE+ L   +L+  +V+  V  
Sbjct: 498  AVYLMYSYARITSIKARAGVKLQDL---ANVLP-SVQHPKEYQLVLHILKFPEVVERVAD 553

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
             L  H +CE+LYD +  F++FY +C+ I    + +       RL++ E  A VMKK   +
Sbjct: 554  TLLPHLICEFLYDTAEKFNDFYRDCHVIGDPLQSQ-------RLVICEVVAAVMKKGMSL 606

Query: 1064 LNI 1066
            L I
Sbjct: 607  LGI 609



 Score =  308 bits (788), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 164/355 (46%), Positives = 220/355 (61%), Gaps = 30/355 (8%)

Query: 94  VFTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDK------ 142
           +F  A+  AFP + +         V +T++    K GD+QCN AMA+ KI KDK      
Sbjct: 33  LFEKAIAQAFPIVPESLEKSRWLVVQATSDA---KHGDYQCNSAMAIHKILKDKVVSHAL 89

Query: 143 ----GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 198
                  K P D++  I   +           KV+ K E+A PGF+N+FL   +  E   
Sbjct: 90  AGVADAPKAPRDVSARIVECIPKN--------KVLLKTEIAGPGFINIFLDPAFIAESFA 141

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I+ NG QPP  ++   V+VDFSSPNIAKEMHVGHLRSTIIG++I R+LE+ GH V R+N
Sbjct: 142 KILKNGPQPPA-SQPQEVVVDFSSPNIAKEMHVGHLRSTIIGESICRVLEFCGHRVHRIN 200

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLI HL+  +P++  + P I+DL  FYKE+KKRFDED  FK+ +   VV 
Sbjct: 201 HVGDWGTQFGMLINHLRTAYPNFHEQPPNISDLTTFYKEAKKRFDEDAEFKEASRTSVVT 260

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLL 377
           LQ  DP   + W+ +CDVSR  FQ +YDRL    L E+GESFY   +  +V  L  KG++
Sbjct: 261 LQAGDPYSLQCWKALCDVSRIQFQMVYDRLECAGLVEQGESFYNSRIPDVVKELTAKGMV 320

Query: 378 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           E  DG KI+  +     P+  VKSDGG+ YD++DL A++ R++E KAD ++YVTD
Sbjct: 321 EESDGAKII--QCGKQFPLMAVKSDGGYGYDSTDLTAVKYRLQEMKADRVIYVTD 373



 Score =  308 bits (788), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 164/355 (46%), Positives = 220/355 (61%), Gaps = 30/355 (8%)

Query: 1111 VFTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDK------ 1159
            +F  A+  AFP + +         V +T++    K GD+QCN AMA+ KI KDK      
Sbjct: 33   LFEKAIAQAFPIVPESLEKSRWLVVQATSDA---KHGDYQCNSAMAIHKILKDKVVSHAL 89

Query: 1160 ----GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 1215
                   K P D++  I   +           KV+ K E+A PGF+N+FL   +  E   
Sbjct: 90   AGVADAPKAPRDVSARIVECIPKN--------KVLLKTEIAGPGFINIFLDPAFIAESFA 141

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I+ NG QPP  ++   V+VDFSSPNIAKEMHVGHLRSTIIG++I R+LE+ GH V R+N
Sbjct: 142  KILKNGPQPPA-SQPQEVVVDFSSPNIAKEMHVGHLRSTIIGESICRVLEFCGHRVHRIN 200

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLI HL+  +P++  + P I+DL  FYKE+KKRFDED  FK+ +   VV 
Sbjct: 201  HVGDWGTQFGMLINHLRTAYPNFHEQPPNISDLTTFYKEAKKRFDEDAEFKEASRTSVVT 260

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLL 1394
            LQ  DP   + W+ +CDVSR  FQ +YDRL    L E+GESFY   +  +V  L  KG++
Sbjct: 261  LQAGDPYSLQCWKALCDVSRIQFQMVYDRLECAGLVEQGESFYNSRIPDVVKELTAKGMV 320

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            E  DG KI+  +     P+  VKSDGG+ YD++DL A++ R++E KAD ++YVTD
Sbjct: 321  EESDGAKII--QCGKQFPLMAVKSDGGYGYDSTDLTAVKYRLQEMKADRVIYVTD 373


>gi|357134510|ref|XP_003568860.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Brachypodium
            distachyon]
          Length = 661

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 277/660 (41%), Positives = 400/660 (60%), Gaps = 46/660 (6%)

Query: 427  IVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDR-------MSVRD 479
            +  V+ HR+  +     A    +   S+  +S T G     +V  + +        SV+ 
Sbjct: 22   LFLVSAHRAAPRFGHCRASSSARLPRSACYASTTMGDETSTSVSAQPQEPAALGAGSVKQ 81

Query: 480  YLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNP 538
             +S++   +++   PE+      V    E    KFGD+QCN+AM L    K  G   KNP
Sbjct: 82   QISNLVVLSLRATVPEV-----DVEPMVEVCTAKFGDYQCNNAMGLWSRVKGSGTSFKNP 136

Query: 539  FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-- 596
              I Q+I+         N     VI+   VA PGFVN+ LS  +  ++I+D++VNG++  
Sbjct: 137  NAIGQAISK--------NLPACDVIESTSVAGPGFVNIVLSNNWVAKRIQDMLVNGIKTW 188

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
             P L  K ++++DFSSPNIAKEMHVGHLRSTIIGDT++R+ E+   +V+R NHVGDWGTQ
Sbjct: 189  APILPVK-KLVIDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGDWGTQ 247

Query: 657  FGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
            FGMLI +L +KFP++    +  I DLQ FYK SK RFD+D  FK RA Q VV LQ  +  
Sbjct: 248  FGMLIEYLFEKFPNWEEVGNQAIGDLQLFYKASKARFDDDAEFKDRAQQAVVRLQGGEEK 307

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
            Y+ AW+ IC++SR +F ++Y  LNV + E+GESFY  ++ Q++  L  +GL+   +G ++
Sbjct: 308  YRAAWKKICEISRNEFDQVYKILNVQIEEKGESFYNPYIPQVLEKLSNQGLITESEGARV 367

Query: 776  MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
            ++ E    IP+ +VK DGGF Y ++DLAA+  R+ EEKA+WI+YVTD+GQ  HF ++ + 
Sbjct: 368  IFIEGH-QIPLIVVKRDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQQHFDMVFKA 426

Query: 836  AKKAGILNPNKTRMDF-----VGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS---- 886
            A+ AG L P+     F     VGFG+VLG D K+F+TRS D V+L++LLDE + RS    
Sbjct: 427  ARMAGWL-PDPKEKKFPKTSHVGFGLVLGADGKRFRTRSTDVVRLADLLDEAISRSKSEL 485

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
            L +L +  +  + T  EL++  +AV +G +KYADL +NR  +Y FSF++ML D+GNTAVY
Sbjct: 486  LQRLTENGKIVDWTDEELAKTSEAVGHGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVY 545

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            L YA+ RI SI R + ++ E+L+   +S  +SL H  E  L   L+R  +V+     +L 
Sbjct: 546  LQYAHARICSIIRKSNMDVEELK---KSGSISLGHPDERVLGLYLIRFAEVVEEACTNLL 602

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
               LCEYLY++S  F+ FY NC  +    E         RLLL EATA VM++CF +L I
Sbjct: 603  PSVLCEYLYNLSEMFTRFYTNCQVVGSPEE-------PSRLLLCEATAIVMRQCFQLLGI 655



 Score =  309 bits (792), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 166/374 (44%), Positives = 237/374 (63%), Gaps = 25/374 (6%)

Query: 63  SSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH 122
           S+S+S+Q +  A           SV+  +S++   +++   PE+      V    E    
Sbjct: 61  STSVSAQPQEPA------ALGAGSVKQQISNLVVLSLRATVPEV-----DVEPMVEVCTA 109

Query: 123 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
           KFGD+QCN+AM L    K  G   KNP  I Q+I+         N     VI+   VA P
Sbjct: 110 KFGDYQCNNAMGLWSRVKGSGTSFKNPNAIGQAISK--------NLPACDVIESTSVAGP 161

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           GFVN+ LS  +  ++I+D++VNG++   P L  K ++++DFSSPNIAKEMHVGHLRSTII
Sbjct: 162 GFVNIVLSNNWVAKRIQDMLVNGIKTWAPILPVK-KLVIDFSSPNIAKEMHVGHLRSTII 220

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKES 298
           GDT++R+ E+   +V+R NHVGDWGTQFGMLI +L +KFP++    +  I DLQ FYK S
Sbjct: 221 GDTLARMFEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNWEEVGNQAIGDLQLFYKAS 280

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 358
           K RFD+D  FK RA Q VV LQ  +  Y+ AW+ IC++SR +F ++Y  LNV + E+GES
Sbjct: 281 KARFDDDAEFKDRAQQAVVRLQGGEEKYRAAWKKICEISRNEFDQVYKILNVQIEEKGES 340

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 418
           FY  ++ Q++  L  +GL+   +G ++++ E    IP+ +VK DGGF Y ++DLAA+  R
Sbjct: 341 FYNPYIPQVLEKLSNQGLITESEGARVIFIEGH-QIPLIVVKRDGGFNYASTDLAALWYR 399

Query: 419 IEEEKADWIVYVTD 432
           + EEKA+WI+YVTD
Sbjct: 400 LNEEKAEWIIYVTD 413



 Score =  309 bits (792), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 166/374 (44%), Positives = 237/374 (63%), Gaps = 25/374 (6%)

Query: 1080 SSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH 1139
            S+S+S+Q +  A           SV+  +S++   +++   PE+      V    E    
Sbjct: 61   STSVSAQPQEPA------ALGAGSVKQQISNLVVLSLRATVPEV-----DVEPMVEVCTA 109

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
            KFGD+QCN+AM L    K  G   KNP  I Q+I+         N     VI+   VA P
Sbjct: 110  KFGDYQCNNAMGLWSRVKGSGTSFKNPNAIGQAISK--------NLPACDVIESTSVAGP 161

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            GFVN+ LS  +  ++I+D++VNG++   P L  K ++++DFSSPNIAKEMHVGHLRSTII
Sbjct: 162  GFVNIVLSNNWVAKRIQDMLVNGIKTWAPILPVK-KLVIDFSSPNIAKEMHVGHLRSTII 220

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKES 1315
            GDT++R+ E+   +V+R NHVGDWGTQFGMLI +L +KFP++    +  I DLQ FYK S
Sbjct: 221  GDTLARMFEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNWEEVGNQAIGDLQLFYKAS 280

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 1375
            K RFD+D  FK RA Q VV LQ  +  Y+ AW+ IC++SR +F ++Y  LNV + E+GES
Sbjct: 281  KARFDDDAEFKDRAQQAVVRLQGGEEKYRAAWKKICEISRNEFDQVYKILNVQIEEKGES 340

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 1435
            FY  ++ Q++  L  +GL+   +G ++++ E    IP+ +VK DGGF Y ++DLAA+  R
Sbjct: 341  FYNPYIPQVLEKLSNQGLITESEGARVIFIEGH-QIPLIVVKRDGGFNYASTDLAALWYR 399

Query: 1436 IEEEKADWIVYVTD 1449
            + EEKA+WI+YVTD
Sbjct: 400  LNEEKAEWIIYVTD 413


>gi|224064484|ref|XP_002301499.1| predicted protein [Populus trichocarpa]
 gi|222843225|gb|EEE80772.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/600 (44%), Positives = 384/600 (64%), Gaps = 32/600 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG-- 533
            +++  L+ +F  +++   P   D    VA+   K    FGD+QCN+AM L    K +   
Sbjct: 10   NLKQKLAKLFQLSLEATVPGEPDIEPLVAACTAK----FGDYQCNNAMGLWSKIKGRPGI 65

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
            E + P  + Q+I          N   +++I+   VA PGFVNV LS+ +  + I+ ++V+
Sbjct: 66   EFRGPPAVGQAIMK--------NLPQSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD 117

Query: 594  GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
            G++   P L+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++ +LE+   +V+R NHVG
Sbjct: 118  GIETWAPKLSIK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLASMLEFSNVEVLRRNHVG 176

Query: 652  DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            DWGTQFGMLI  L +KFP++       I DLQAFYKESK+RFD D  FK RA + VV LQ
Sbjct: 177  DWGTQFGMLIEFLFEKFPNFEDVNETAIGDLQAFYKESKQRFDVDAEFKDRAQKAVVRLQ 236

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              +  Y+KAW  IC++SRR+F ++Y RL V L E+GESFY  ++  ++  L  +GL+E  
Sbjct: 237  SGEQMYRKAWAQICEISRREFDQVYQRLGVHLEEKGESFYNPYIPGVIEALTNQGLVEES 296

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
             G ++++ E   +IP+ +VKSDGG+ Y ++D+ A+  R+ EEKA+WI+YVTD+GQ  HF 
Sbjct: 297  KGARVIFIEGI-NIPLIVVKSDGGYNYASTDMTALWYRLTEEKAEWIIYVTDVGQQQHFD 355

Query: 831  LLEECAKKAGILNPNK---TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            +  + AK+AG L  +     +   VGFG+VLGED K+F+TRS + V+L++LLDE   RS 
Sbjct: 356  MFFKAAKRAGWLPADDRQYPKASHVGFGLVLGEDGKRFRTRSTEVVRLADLLDEAKTRSK 415

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
              L ++ +  E T  EL +  +AV YG +KYADL +NR  +Y F FD+ML+D+GNTAVYL
Sbjct: 416  AALIERGKAAEWTEEELEQTAEAVGYGAVKYADLKNNRLTNYTFDFDQMLNDKGNTAVYL 475

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+ RI SI R +G ++ +L+   ++  + L+H  E AL   LL+  +V+     +L  
Sbjct: 476  LYAHARICSIIRKSGKDTGELK---KTGKIVLDHADERALGLHLLQFAEVVEEACTNLLP 532

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            + LCEYLY++S  ++ FY NC  +    E       T RLLL EATA VM+KCF +L I+
Sbjct: 533  NVLCEYLYNLSENYTRFYSNCQVVGSAEE-------TSRLLLCEATAVVMRKCFFLLGIK 585



 Score =  301 bits (771), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 159/352 (45%), Positives = 229/352 (65%), Gaps = 19/352 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG-- 143
           +++  L+ +F  +++   P   D    VA+   K    FGD+QCN+AM L    K +   
Sbjct: 10  NLKQKLAKLFQLSLEATVPGEPDIEPLVAACTAK----FGDYQCNNAMGLWSKIKGRPGI 65

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
           E + P  + Q+I          N   +++I+   VA PGFVNV LS+ +  + I+ ++V+
Sbjct: 66  EFRGPPAVGQAIMK--------NLPQSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD 117

Query: 204 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
           G++   P L+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++ +LE+   +V+R NHVG
Sbjct: 118 GIETWAPKLSIK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLASMLEFSNVEVLRRNHVG 176

Query: 262 DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           DWGTQFGMLI  L +KFP++       I DLQAFYKESK+RFD D  FK RA + VV LQ
Sbjct: 177 DWGTQFGMLIEFLFEKFPNFEDVNETAIGDLQAFYKESKQRFDVDAEFKDRAQKAVVRLQ 236

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             +  Y+KAW  IC++SRR+F ++Y RL V L E+GESFY  ++  ++  L  +GL+E  
Sbjct: 237 SGEQMYRKAWAQICEISRREFDQVYQRLGVHLEEKGESFYNPYIPGVIEALTNQGLVEES 296

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            G ++++ E   +IP+ +VKSDGG+ Y ++D+ A+  R+ EEKA+WI+YVTD
Sbjct: 297 KGARVIFIEGI-NIPLIVVKSDGGYNYASTDMTALWYRLTEEKAEWIIYVTD 347



 Score =  301 bits (771), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 159/352 (45%), Positives = 229/352 (65%), Gaps = 19/352 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG-- 1160
            +++  L+ +F  +++   P   D    VA+   K    FGD+QCN+AM L    K +   
Sbjct: 10   NLKQKLAKLFQLSLEATVPGEPDIEPLVAACTAK----FGDYQCNNAMGLWSKIKGRPGI 65

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
            E + P  + Q+I          N   +++I+   VA PGFVNV LS+ +  + I+ ++V+
Sbjct: 66   EFRGPPAVGQAIMK--------NLPQSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD 117

Query: 1221 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
            G++   P L+ K R +VDFSSPNIAKEMHVGHLRSTIIGDT++ +LE+   +V+R NHVG
Sbjct: 118  GIETWAPKLSIK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLASMLEFSNVEVLRRNHVG 176

Query: 1279 DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            DWGTQFGMLI  L +KFP++       I DLQAFYKESK+RFD D  FK RA + VV LQ
Sbjct: 177  DWGTQFGMLIEFLFEKFPNFEDVNETAIGDLQAFYKESKQRFDVDAEFKDRAQKAVVRLQ 236

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              +  Y+KAW  IC++SRR+F ++Y RL V L E+GESFY  ++  ++  L  +GL+E  
Sbjct: 237  SGEQMYRKAWAQICEISRREFDQVYQRLGVHLEEKGESFYNPYIPGVIEALTNQGLVEES 296

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             G ++++ E   +IP+ +VKSDGG+ Y ++D+ A+  R+ EEKA+WI+YVTD
Sbjct: 297  KGARVIFIEGI-NIPLIVVKSDGGYNYASTDMTALWYRLTEEKAEWIIYVTD 347


>gi|226491618|ref|NP_001148134.1| arginyl-tRNA synthetase [Zea mays]
 gi|194698640|gb|ACF83404.1| unknown [Zea mays]
 gi|195616022|gb|ACG29841.1| arginyl-tRNA synthetase [Zea mays]
          Length = 604

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 271/604 (44%), Positives = 378/604 (62%), Gaps = 40/604 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            SV+  LS +   ++Q   P++  +     S       KF D+QCN+AM L    K  G  
Sbjct: 22   SVKQQLSRLVLSSLQTTLPDVEVEPMVEVSA------KFADYQCNNAMGLWSKVKGSGTI 75

Query: 536  -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             KNP  I Q+IA  + S        + +I+   VA PGFVN+ LS  +  ++I+D++VNG
Sbjct: 76   FKNPNSIGQAIAKNLPS--------SDIIESASVAGPGFVNITLSNRWVAQRIQDMLVNG 127

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            ++   P L    R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+    V+R NHVGD
Sbjct: 128  IKTWAPVLPVN-RTVVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVVVLRRNHVGD 186

Query: 653  WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            WGTQFGMLI +L +KFP++       I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 187  WGTQFGMLIEYLFEKFPNWQEIGCQAIGDLQIFYKASKHRFDSDPDFKARAQQGVVRLQG 246

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             +  Y++AW+ ICD+SR +F  +Y RLNV L E+GESFY  ++ Q++  L  KGL++  +
Sbjct: 247  GEDKYREAWKKICDISRSEFDLVYKRLNVVLEEKGESFYNPYIPQVLEELSNKGLIKESE 306

Query: 772  GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            G ++++ +    IP+ +VKSDGGF Y ++DL A+  R+  E+A+WI+YVTD+GQ  HF +
Sbjct: 307  GARVIFIQGH-QIPLIVVKSDGGFNYASTDLTALWYRLNVEQAEWIIYVTDVGQQQHFDM 365

Query: 832  LEECAKKAGILNPNKTRMDF-----VGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
            +   AK AG L P+ +   F     VGFG+VLG D K+F+TRS + V+L ELLDE   RS
Sbjct: 366  VFSAAKMAGWL-PDPSEKKFPKTSHVGFGLVLGSDGKRFRTRSTEVVRLVELLDEAKSRS 424

Query: 887  ----LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
                L +L +  +  + T  EL +  +AV YG +KYADL +NR  +Y FSF++ML D+GN
Sbjct: 425  KSELLQRLTENGKIVDWTDEELEQTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGN 484

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TAVYL YA+ RI SI R +  N E+L++   S  +SL+H  E  L   L+R  +V+    
Sbjct: 485  TAVYLQYAHARICSIIRKSNKNVEELKM---SGAISLDHPDERVLGLYLIRFAEVVEEAC 541

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
             +L  + +CEYLY++S  F++FY NC  +    E       T RLLL +ATA VM++CF+
Sbjct: 542  TNLLPNVVCEYLYNLSEMFTKFYTNCQVVGSPEE-------TSRLLLCQATAVVMRQCFN 594

Query: 1063 ILNI 1066
            +L I
Sbjct: 595  LLGI 598



 Score =  305 bits (781), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 162/351 (46%), Positives = 224/351 (63%), Gaps = 20/351 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           SV+  LS +   ++Q   P++  +     S       KF D+QCN+AM L    K  G  
Sbjct: 22  SVKQQLSRLVLSSLQTTLPDVEVEPMVEVSA------KFADYQCNNAMGLWSKVKGSGTI 75

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            KNP  I Q+IA  + S        + +I+   VA PGFVN+ LS  +  ++I+D++VNG
Sbjct: 76  FKNPNSIGQAIAKNLPS--------SDIIESASVAGPGFVNITLSNRWVAQRIQDMLVNG 127

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           ++   P L    R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+    V+R NHVGD
Sbjct: 128 IKTWAPVLPVN-RTVVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVVVLRRNHVGD 186

Query: 263 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           WGTQFGMLI +L +KFP++       I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 187 WGTQFGMLIEYLFEKFPNWQEIGCQAIGDLQIFYKASKHRFDSDPDFKARAQQGVVRLQG 246

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            +  Y++AW+ ICD+SR +F  +Y RLNV L E+GESFY  ++ Q++  L  KGL++  +
Sbjct: 247 GEDKYREAWKKICDISRSEFDLVYKRLNVVLEEKGESFYNPYIPQVLEELSNKGLIKESE 306

Query: 382 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           G ++++ +    IP+ +VKSDGGF Y ++DL A+  R+  E+A+WI+YVTD
Sbjct: 307 GARVIFIQGH-QIPLIVVKSDGGFNYASTDLTALWYRLNVEQAEWIIYVTD 356



 Score =  305 bits (781), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 162/351 (46%), Positives = 224/351 (63%), Gaps = 20/351 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            SV+  LS +   ++Q   P++  +     S       KF D+QCN+AM L    K  G  
Sbjct: 22   SVKQQLSRLVLSSLQTTLPDVEVEPMVEVSA------KFADYQCNNAMGLWSKVKGSGTI 75

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             KNP  I Q+IA  + S        + +I+   VA PGFVN+ LS  +  ++I+D++VNG
Sbjct: 76   FKNPNSIGQAIAKNLPS--------SDIIESASVAGPGFVNITLSNRWVAQRIQDMLVNG 127

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            ++   P L    R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+    V+R NHVGD
Sbjct: 128  IKTWAPVLPVN-RTVVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVVVLRRNHVGD 186

Query: 1280 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            WGTQFGMLI +L +KFP++       I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 187  WGTQFGMLIEYLFEKFPNWQEIGCQAIGDLQIFYKASKHRFDSDPDFKARAQQGVVRLQG 246

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +  Y++AW+ ICD+SR +F  +Y RLNV L E+GESFY  ++ Q++  L  KGL++  +
Sbjct: 247  GEDKYREAWKKICDISRSEFDLVYKRLNVVLEEKGESFYNPYIPQVLEELSNKGLIKESE 306

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G ++++ +    IP+ +VKSDGGF Y ++DL A+  R+  E+A+WI+YVTD
Sbjct: 307  GARVIFIQGH-QIPLIVVKSDGGFNYASTDLTALWYRLNVEQAEWIIYVTD 356


>gi|294885225|ref|XP_002771232.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239874712|gb|EER03048.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 602

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/571 (45%), Positives = 365/571 (63%), Gaps = 30/571 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+QCN+AM L K FK   E  +   I + I   + S L       +  + + VA  G
Sbjct: 39   KFGDYQCNNAMGLAKKFK--SELPDGMKIPKQIGEKIKSNLMEES--PEEFESVTVAPAG 94

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQP-------PTLNKKLRVLVDFSSPNIAKEMHVGHLR 625
            FV V LS  +  +Q+   ++   +        P      +V+VD SSPNIAKEMHVGHLR
Sbjct: 95   FVTVKLSSGWIAKQLTSSVLGECKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEMHVGHLR 154

Query: 626  STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 685
            STI+G+T+SR+LEY G+DV R+NHVGDWGTQFGMLI H++D +PD+L  +P ++DLQ FY
Sbjct: 155  STILGETVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHTPEVSDLQTFY 214

Query: 686  KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT-LTE 744
            K +KKRFDE+  FKKR+ + VVALQ  D   +KAW++ CD+SR+ F+++Y+RL +  L E
Sbjct: 215  KAAKKRFDEEPDFKKRSQEEVVALQSGDEYARKAWQICCDISRKSFEEVYNRLGIEGLKE 274

Query: 745  RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            +GESFY + +   V  LEK+GL+   +G K ++  D   +PM +VKSDGG+ YD++D+ A
Sbjct: 275  QGESFYNEMIGPTVETLEKEGLVVESNGAKCIF-TDVDDVPMMVVKSDGGYGYDSTDVTA 333

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +  R+ +  AD +VY+TDLGQ VHF+ L E AK AG  +P +T+++++GFGVV G+D KK
Sbjct: 334  VWYRLTQLHADEVVYITDLGQEVHFKKLFEVAKMAGWHHPPQTKLEYLGFGVVCGDDGKK 393

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDK---------NRHTELTPTELSEAQQAVAYGC 915
            FKTRSG TVKL++LLDE   R+  +L+ +          R T LT  E   A + +    
Sbjct: 394  FKTRSGATVKLTDLLDEAEDRAKKELESRLNAGEGEAAGRSTGLTEEEFDRASKIIGVAS 453

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
            ++Y DL  NR  +Y+F+FDKMLD +GNTAV+LLYAY RI SI R A  +     +   S 
Sbjct: 454  VRYFDLRQNRTTNYIFNFDKMLDPKGNTAVFLLYAYARICSILRKANFDYHS-GLDYSSE 512

Query: 976  PVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDA 1035
             V++  EKE ALA  +LR  +V+  V  DL  H LCEY++D++  F+ FY  C  +  D 
Sbjct: 513  EVTITEEKERALALEILRFAEVMQSVLADLQCHRLCEYMWDLTNRFTAFYTECKVVGSDQ 572

Query: 1036 EGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            E         RLLL EAT +V+ +CFDIL+I
Sbjct: 573  E-------RSRLLLCEATRRVLAQCFDILDI 596



 Score =  290 bits (742), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 210/318 (66%), Gaps = 13/318 (4%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+QCN+AM L K FK   E  +   I + I   + S L       +  + + VA  G
Sbjct: 39  KFGDYQCNNAMGLAKKFK--SELPDGMKIPKQIGEKIKSNLMEES--PEEFESVTVAPAG 94

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQP-------PTLNKKLRVLVDFSSPNIAKEMHVGHLR 235
           FV V LS  +  +Q+   ++   +        P      +V+VD SSPNIAKEMHVGHLR
Sbjct: 95  FVTVKLSSGWIAKQLTSSVLGECKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEMHVGHLR 154

Query: 236 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 295
           STI+G+T+SR+LEY G+DV R+NHVGDWGTQFGMLI H++D +PD+L  +P ++DLQ FY
Sbjct: 155 STILGETVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHTPEVSDLQTFY 214

Query: 296 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT-LTE 354
           K +KKRFDE+  FKKR+ + VVALQ  D   +KAW++ CD+SR+ F+++Y+RL +  L E
Sbjct: 215 KAAKKRFDEEPDFKKRSQEEVVALQSGDEYARKAWQICCDISRKSFEEVYNRLGIEGLKE 274

Query: 355 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           +GESFY + +   V  LEK+GL+   +G K ++  D   +PM +VKSDGG+ YD++D+ A
Sbjct: 275 QGESFYNEMIGPTVETLEKEGLVVESNGAKCIF-TDVDDVPMMVVKSDGGYGYDSTDVTA 333

Query: 415 IRQRIEEEKADWIVYVTD 432
           +  R+ +  AD +VY+TD
Sbjct: 334 VWYRLTQLHADEVVYITD 351



 Score =  290 bits (742), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 210/318 (66%), Gaps = 13/318 (4%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+QCN+AM L K FK   E  +   I + I   + S L       +  + + VA  G
Sbjct: 39   KFGDYQCNNAMGLAKKFK--SELPDGMKIPKQIGEKIKSNLMEES--PEEFESVTVAPAG 94

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQP-------PTLNKKLRVLVDFSSPNIAKEMHVGHLR 1252
            FV V LS  +  +Q+   ++   +        P      +V+VD SSPNIAKEMHVGHLR
Sbjct: 95   FVTVKLSSGWIAKQLTSSVLGECKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEMHVGHLR 154

Query: 1253 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 1312
            STI+G+T+SR+LEY G+DV R+NHVGDWGTQFGMLI H++D +PD+L  +P ++DLQ FY
Sbjct: 155  STILGETVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHTPEVSDLQTFY 214

Query: 1313 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT-LTE 1371
            K +KKRFDE+  FKKR+ + VVALQ  D   +KAW++ CD+SR+ F+++Y+RL +  L E
Sbjct: 215  KAAKKRFDEEPDFKKRSQEEVVALQSGDEYARKAWQICCDISRKSFEEVYNRLGIEGLKE 274

Query: 1372 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            +GESFY + +   V  LEK+GL+   +G K ++  D   +PM +VKSDGG+ YD++D+ A
Sbjct: 275  QGESFYNEMIGPTVETLEKEGLVVESNGAKCIF-TDVDDVPMMVVKSDGGYGYDSTDVTA 333

Query: 1432 IRQRIEEEKADWIVYVTD 1449
            +  R+ +  AD +VY+TD
Sbjct: 334  VWYRLTQLHADEVVYITD 351


>gi|170077224|ref|YP_001733862.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692817|sp|B1XPX8.1|SYR_SYNP2 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|169884893|gb|ACA98606.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 585

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/567 (47%), Positives = 371/567 (65%), Gaps = 38/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 571
            KFGD+Q N A++L KI K     KNP +IAQSI   +  ++   NP+         +A P
Sbjct: 38   KFGDYQSNVALSLTKILK-----KNPREIAQSIIEALDIADTCENPT---------IAGP 83

Query: 572  GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            GF+N  L   Y    +K++  +    ++P    +K  V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINFSLKPSYLATLLKEVQQSDRLAIEPAENPQK--VIVDFSSPNIAKEMHVGHLRSTI 141

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 686
            IGD+I+R+LE+ G DV+RLNHVGDWGTQFGMLI +L++ +PD LTK+    I DL AFYK
Sbjct: 142  IGDSIARILEFRGQDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADALDIGDLVAFYK 201

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 746
            ++K RFDEDE FK+ +   VV LQ  D + +KAW+++C+ SRR+FQKIYD L++ LTERG
Sbjct: 202  KAKVRFDEDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIYDILDIKLTERG 261

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
            ESFY  ++  ++  L++ GLLE D G + ++ E     D   +P+ + KSDGGF Y T+D
Sbjct: 262  ESFYNPYLADVLTALDEVGLLEEDAGAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTD 321

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAAIR RI+E++A  I+YVTD GQ  HF  + + A++AG L P+   +  V FG+V GED
Sbjct: 322  LAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQVAERAGFL-PDDVEVVHVPFGLVQGED 380

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYA 919
             KK KTR+GDT+KL +LLDE + RS   L+ +    E   T   + +  Q V  G +KYA
Sbjct: 381  GKKLKTRAGDTIKLKDLLDEAVNRSRADLEKRLAEDERQETADFIEKVSQVVGIGAVKYA 440

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  +Y+FSFDKML  +GNTA Y+LYAY R+  ++R  GI   DL      TP+ L
Sbjct: 441  DLSQNRTSNYIFSFDKMLALQGNTAPYMLYAYVRVQGVSRQGGI---DLSTLPTDTPIIL 497

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
            E   E  LAK LL++++VLM V +DL  + LCEYLYD+S  F++FY+ C  ++ + + +I
Sbjct: 498  EEAAELTLAKHLLQLSEVLMSVEQDLMPNRLCEYLYDLSRKFNQFYEACPILKAEGDRRI 557

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
                  RL+LA+ TA+ +K    +L I
Sbjct: 558  -----SRLILADTTARTLKLGLSLLGI 579



 Score =  305 bits (780), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 165/333 (49%), Positives = 224/333 (67%), Gaps = 30/333 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 181
           KFGD+Q N A++L KI K     KNP +IAQSI   +  ++   NP+         +A P
Sbjct: 38  KFGDYQSNVALSLTKILK-----KNPREIAQSIIEALDIADTCENPT---------IAGP 83

Query: 182 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           GF+N  L   Y    +K++  +    ++P    +K  V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84  GFINFSLKPSYLATLLKEVQQSDRLAIEPAENPQK--VIVDFSSPNIAKEMHVGHLRSTI 141

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 296
           IGD+I+R+LE+ G DV+RLNHVGDWGTQFGMLI +L++ +PD LTK+    I DL AFYK
Sbjct: 142 IGDSIARILEFRGQDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADALDIGDLVAFYK 201

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 356
           ++K RFDEDE FK+ +   VV LQ  D + +KAW+++C+ SRR+FQKIYD L++ LTERG
Sbjct: 202 KAKVRFDEDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIYDILDIKLTERG 261

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
           ESFY  ++  ++  L++ GLLE D G + ++ E     D   +P+ + KSDGGF Y T+D
Sbjct: 262 ESFYNPYLADVLTALDEVGLLEEDAGAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTD 321

Query: 412 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           LAAIR RI+E++A  I+YVTD      + QV Q
Sbjct: 322 LAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQ 354



 Score =  305 bits (780), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 165/333 (49%), Positives = 224/333 (67%), Gaps = 30/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 1198
            KFGD+Q N A++L KI K     KNP +IAQSI   +  ++   NP+         +A P
Sbjct: 38   KFGDYQSNVALSLTKILK-----KNPREIAQSIIEALDIADTCENPT---------IAGP 83

Query: 1199 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            GF+N  L   Y    +K++  +    ++P    +K  V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINFSLKPSYLATLLKEVQQSDRLAIEPAENPQK--VIVDFSSPNIAKEMHVGHLRSTI 141

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 1313
            IGD+I+R+LE+ G DV+RLNHVGDWGTQFGMLI +L++ +PD LTK+    I DL AFYK
Sbjct: 142  IGDSIARILEFRGQDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADALDIGDLVAFYK 201

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
            ++K RFDEDE FK+ +   VV LQ  D + +KAW+++C+ SRR+FQKIYD L++ LTERG
Sbjct: 202  KAKVRFDEDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIYDILDIKLTERG 261

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
            ESFY  ++  ++  L++ GLLE D G + ++ E     D   +P+ + KSDGGF Y T+D
Sbjct: 262  ESFYNPYLADVLTALDEVGLLEEDAGAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTD 321

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            LAAIR RI+E++A  I+YVTD      + QV Q
Sbjct: 322  LAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQ 354


>gi|125550952|gb|EAY96661.1| hypothetical protein OsI_18575 [Oryza sativa Indica Group]
          Length = 606

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/603 (45%), Positives = 373/603 (61%), Gaps = 37/603 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            SV+  LS +   +++   PE+      V    E    KFGD+QCN+AM L    K  G  
Sbjct: 23   SVKQQLSKLVIASLRTTVPEV-----EVDPMVEVCTAKFGDYQCNNAMGLWSRIKGSGTS 77

Query: 536  -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             KNP  I Q+IA         N   + +I+   VA PGFVN+ LS  +  ++I+ ++VNG
Sbjct: 78   FKNPNAIGQAIAK--------NLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQGMLVNG 129

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            ++   P L  K R ++DFSSPNIAKEMHVGHLRSTIIGDT++R+ E+   +V+R NHVGD
Sbjct: 130  IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGD 188

Query: 653  WGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            WGTQFGMLI +L +KFP++    S  I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 189  WGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQG 248

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             +  Y+ AW  IC++SR +F  +Y  LNV L E+GESFY   + Q++  L  KGL++  +
Sbjct: 249  GEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESE 308

Query: 772  GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            G K+++ E    IP+ +VK DGGF Y ++DLAA+  R+  EKA+WI+YVTD+GQ  HF +
Sbjct: 309  GAKVIFIEGH-QIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQQHFDM 367

Query: 832  LEECAKKAGILNPNK----TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS- 886
                A+ AG L   K     + + VGFG+VLG D K+F+TRS + V+L ELLDE   RS 
Sbjct: 368  FFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVRLIELLDEAKSRSK 427

Query: 887  ---LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
               L +L +  +  + T  EL +  +AV YG +KYADL +NR  +Y FSF++ML D+GNT
Sbjct: 428  SELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNT 487

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            AVYL YA+ RI SI R +  + E+L++   S  +SL+H  E  L   L+R  +V+     
Sbjct: 488  AVYLQYAHARICSIIRKSNKDVEELKM---SGAISLDHPDERVLGLYLIRFAEVVEEACT 544

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +L  + LCEYLY++S  F+ FY NC  +    E       T RLLL +ATA VM++CF++
Sbjct: 545  NLLPNVLCEYLYNLSEMFTRFYTNCQVVGSPEE-------TSRLLLCQATAVVMRQCFEL 597

Query: 1064 LNI 1066
            L I
Sbjct: 598  LGI 600



 Score =  308 bits (788), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/351 (47%), Positives = 222/351 (63%), Gaps = 19/351 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           SV+  LS +   +++   PE+      V    E    KFGD+QCN+AM L    K  G  
Sbjct: 23  SVKQQLSKLVIASLRTTVPEV-----EVDPMVEVCTAKFGDYQCNNAMGLWSRIKGSGTS 77

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            KNP  I Q+IA         N   + +I+   VA PGFVN+ LS  +  ++I+ ++VNG
Sbjct: 78  FKNPNAIGQAIAK--------NLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQGMLVNG 129

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           ++   P L  K R ++DFSSPNIAKEMHVGHLRSTIIGDT++R+ E+   +V+R NHVGD
Sbjct: 130 IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGD 188

Query: 263 WGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           WGTQFGMLI +L +KFP++    S  I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 189 WGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQG 248

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            +  Y+ AW  IC++SR +F  +Y  LNV L E+GESFY   + Q++  L  KGL++  +
Sbjct: 249 GEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESE 308

Query: 382 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           G K+++ E    IP+ +VK DGGF Y ++DLAA+  R+  EKA+WI+YVTD
Sbjct: 309 GAKVIFIEGH-QIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTD 358



 Score =  308 bits (788), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/351 (47%), Positives = 222/351 (63%), Gaps = 19/351 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            SV+  LS +   +++   PE+      V    E    KFGD+QCN+AM L    K  G  
Sbjct: 23   SVKQQLSKLVIASLRTTVPEV-----EVDPMVEVCTAKFGDYQCNNAMGLWSRIKGSGTS 77

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             KNP  I Q+IA         N   + +I+   VA PGFVN+ LS  +  ++I+ ++VNG
Sbjct: 78   FKNPNAIGQAIAK--------NLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQGMLVNG 129

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            ++   P L  K R ++DFSSPNIAKEMHVGHLRSTIIGDT++R+ E+   +V+R NHVGD
Sbjct: 130  IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGD 188

Query: 1280 WGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            WGTQFGMLI +L +KFP++    S  I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 189  WGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQG 248

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +  Y+ AW  IC++SR +F  +Y  LNV L E+GESFY   + Q++  L  KGL++  +
Sbjct: 249  GEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESE 308

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G K+++ E    IP+ +VK DGGF Y ++DLAA+  R+  EKA+WI+YVTD
Sbjct: 309  GAKVIFIEGH-QIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTD 358


>gi|425461476|ref|ZP_18840954.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
 gi|389825672|emb|CCI24400.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
          Length = 585

 Score =  494 bits (1272), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/574 (46%), Positives = 378/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I+ N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPGYLETQLKDLIIDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ E+KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIAYSLADLEKRLASEEREETGDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLSLLGI 579



 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 225/340 (66%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I+ N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQPPEIAGPGFINLTLKPGYLETQLKDLIIDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354



 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 225/340 (66%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I+ N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPGYLETQLKDLIIDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354


>gi|255580290|ref|XP_002530974.1| arginyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529450|gb|EEF31409.1| arginyl-tRNA synthetase, putative [Ricinus communis]
          Length = 615

 Score =  494 bits (1272), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/639 (43%), Positives = 389/639 (60%), Gaps = 46/639 (7%)

Query: 435  SYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFP 494
            S HQ    +A  E  Q  S+ +  +  G  KK              L+ +   +++   P
Sbjct: 10   STHQ--HGLASPEPNQLCSAPAEEENMGNLKKQ-------------LAKLIAVSLRTTLP 54

Query: 495  ELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGEKKNPFDIAQSIASVVTSEL 553
               D    VAS   K    FGD+QCN+AM L  K+       +NP  + Q+I        
Sbjct: 55   TQFDIDPLVASCRTK----FGDYQCNNAMGLFSKLRGTNSNYQNPVAVGQAIMR------ 104

Query: 554  ATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFS 611
              N   +K+I+   VA PGFVN+ LS  +  E I+ ++VNG++   P L+ K R +VDFS
Sbjct: 105  --NLPFSKMIESSSVAGPGFVNIVLSNKWMAENIQKMLVNGIETWAPKLSIK-RAVVDFS 161

Query: 612  SPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY 671
            SPNIAKE+HVGHLRSTIIGD+++R+LE+   +V+R NHVGDWGTQFGMLI  L +++P++
Sbjct: 162  SPNIAKELHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEFLFERYPNF 221

Query: 672  L-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRD 730
                   I +LQAFYK SK+RFD D  FK+RA + VV LQ  +P Y++AW  ICD+SRR+
Sbjct: 222  EDVNECAIDNLQAFYKASKQRFDIDFEFKERAQKAVVRLQGGEPKYRQAWAQICDISRRE 281

Query: 731  FQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVK 790
            F  +Y RL V L E+GESFY  ++  ++  L ++GL+E  +G ++++ E    IP+  VK
Sbjct: 282  FDMVYQRLRVQLEEKGESFYNPYIPGVIEALTQQGLVEESEGARVIFIEGY-DIPLIAVK 340

Query: 791  SDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKT--- 847
            SDGG+ Y ++DLAA+  R+ EEKA+WI+YVTD GQ  HF ++ + AK+AG L        
Sbjct: 341  SDGGYNYASTDLAALWYRLNEEKAEWIIYVTDAGQNQHFEMVFKAAKRAGWLLSADNLYP 400

Query: 848  RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEA 907
            ++  VGFGV+ GED K+F+TRS + V+L +LLDE   RS   L ++ +  E T  EL + 
Sbjct: 401  KVTHVGFGVLKGEDGKRFRTRSTEVVRLVDLLDEAKMRSKTALIERGKAEEWTDDELEQT 460

Query: 908  QQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSED 967
             +AV YG +KYADL +NR  DY F+FD+ML+D+GNTAVYLLYA+ RI SI R +G + E+
Sbjct: 461  AEAVGYGAVKYADLKNNRMTDYKFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGRDIEE 520

Query: 968  LRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDN 1027
            L+    +T + L+H  E +L   LL   + +     +L    LCEYLY +S  F++FY N
Sbjct: 521  LK---NTTTLVLDHADERSLGLHLLHFAETVEEACINLLPSVLCEYLYSLSEYFTKFYSN 577

Query: 1028 CYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            C  +    E         RLLL EATA VM+KCF +L I
Sbjct: 578  CQVVGSGEE-------RSRLLLCEATALVMRKCFFLLGI 609



 Score =  306 bits (785), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 167/387 (43%), Positives = 237/387 (61%), Gaps = 31/387 (8%)

Query: 50  QRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDK 109
           Q  +A  E  Q  S+    +  G  KK              L+ +   +++   P   D 
Sbjct: 13  QHGLASPEPNQLCSAPAEEENMGNLKKQ-------------LAKLIAVSLRTTLPTQFDI 59

Query: 110 TASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGEKKNPFDIAQSIASVVTSELATNPS 168
              VAS   K    FGD+QCN+AM L  K+       +NP  + Q+I          N  
Sbjct: 60  DPLVASCRTK----FGDYQCNNAMGLFSKLRGTNSNYQNPVAVGQAIMR--------NLP 107

Query: 169 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIA 226
            +K+I+   VA PGFVN+ LS  +  E I+ ++VNG++   P L+ K R +VDFSSPNIA
Sbjct: 108 FSKMIESSSVAGPGFVNIVLSNKWMAENIQKMLVNGIETWAPKLSIK-RAVVDFSSPNIA 166

Query: 227 KEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS 285
           KE+HVGHLRSTIIGD+++R+LE+   +V+R NHVGDWGTQFGMLI  L +++P++     
Sbjct: 167 KELHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEFLFERYPNFEDVNE 226

Query: 286 PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIY 345
             I +LQAFYK SK+RFD D  FK+RA + VV LQ  +P Y++AW  ICD+SRR+F  +Y
Sbjct: 227 CAIDNLQAFYKASKQRFDIDFEFKERAQKAVVRLQGGEPKYRQAWAQICDISRREFDMVY 286

Query: 346 DRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 405
            RL V L E+GESFY  ++  ++  L ++GL+E  +G ++++ E    IP+  VKSDGG+
Sbjct: 287 QRLRVQLEEKGESFYNPYIPGVIEALTQQGLVEESEGARVIFIEGY-DIPLIAVKSDGGY 345

Query: 406 TYDTSDLAAIRQRIEEEKADWIVYVTD 432
            Y ++DLAA+  R+ EEKA+WI+YVTD
Sbjct: 346 NYASTDLAALWYRLNEEKAEWIIYVTD 372



 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 159/351 (45%), Positives = 229/351 (65%), Gaps = 18/351 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 1161
            +++  L+ +   +++   P   D    VAS   K    FGD+QCN+AM L  K+      
Sbjct: 36   NLKKQLAKLIAVSLRTTLPTQFDIDPLVASCRTK----FGDYQCNNAMGLFSKLRGTNSN 91

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             +NP  + Q+I          N   +K+I+   VA PGFVN+ LS  +  E I+ ++VNG
Sbjct: 92   YQNPVAVGQAIMR--------NLPFSKMIESSSVAGPGFVNIVLSNKWMAENIQKMLVNG 143

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            ++   P L+ K R +VDFSSPNIAKE+HVGHLRSTIIGD+++R+LE+   +V+R NHVGD
Sbjct: 144  IETWAPKLSIK-RAVVDFSSPNIAKELHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGD 202

Query: 1280 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            WGTQFGMLI  L +++P++       I +LQAFYK SK+RFD D  FK+RA + VV LQ 
Sbjct: 203  WGTQFGMLIEFLFERYPNFEDVNECAIDNLQAFYKASKQRFDIDFEFKERAQKAVVRLQG 262

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +P Y++AW  ICD+SRR+F  +Y RL V L E+GESFY  ++  ++  L ++GL+E  +
Sbjct: 263  GEPKYRQAWAQICDISRREFDMVYQRLRVQLEEKGESFYNPYIPGVIEALTQQGLVEESE 322

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G ++++ E    IP+  VKSDGG+ Y ++DLAA+  R+ EEKA+WI+YVTD
Sbjct: 323  GARVIFIEGY-DIPLIAVKSDGGYNYASTDLAALWYRLNEEKAEWIIYVTD 372


>gi|159475080|ref|XP_001695651.1| hypothetical protein CHLREDRAFT_119290 [Chlamydomonas reinhardtii]
 gi|158275662|gb|EDP01438.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 589

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 275/607 (45%), Positives = 382/607 (62%), Gaps = 32/607 (5%)

Query: 469  VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CK 527
            V  +D  SVR  ++D+F  A+  A+P  G +    A  N K     GD+QCN+AMAL  K
Sbjct: 2    VHTKDHGSVRAEVADLFRSALNTAYPNAGIEPVVAACNNAKN----GDYQCNNAMALFGK 57

Query: 528  IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
            +   +   K P D+A +I       LA  P+   +I +  +A PGF+N+ L++     ++
Sbjct: 58   LKGTENAPKAPRDVANAI-------LAALPA-NDLISETSLAGPGFINIRLNKDALARRV 109

Query: 588  KDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 645
              ++ +G+    P  +   +V++DFSSPN+AKEMHVGHLRSTIIGDT+ R+ EY G DV+
Sbjct: 110  GSMLTDGLAKFAPEGHAGKKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRVFEYCGSDVL 169

Query: 646  RLNHVGDWGTQFGMLIAHLQD--KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 703
            RLNHVGDWGTQFGMLI H+ D  K  D   K   +ADLQ  Y+ +KKRFDE+E FK RA 
Sbjct: 170  RLNHVGDWGTQFGMLIEHMADTRKARD-ADKDEDVADLQELYRAAKKRFDEEEEFKTRAR 228

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 763
            + V  LQ  D     +W+ IC  SRR+F+ +Y RL VTL ERGESFY   ++ +V  L++
Sbjct: 229  EAVTRLQSGDATSLASWQRICAASRREFEALYTRLGVTLQERGESFYNPMLKGIVDGLKE 288

Query: 764  KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             G+  +DDG   ++ E + S+P+ + KSDGGF Y ++D+AA+  R+ EEKADWI+YVTD+
Sbjct: 289  TGVATIDDGATCVFVEGQ-SVPLIVQKSDGGFGYASTDMAALHHRLNEEKADWIIYVTDV 347

Query: 824  GQGVHFRLLEECAKKAGIL-NPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
            GQ  HF L+   AKKAG L      ++  VGFG+VLGED K+F+TRSGD V+L ELLDE 
Sbjct: 348  GQSQHFELVFGAAKKAGWLKEAAGPKVSHVGFGLVLGEDGKRFRTRSGDLVRLVELLDEA 407

Query: 883  LRRSLDKLKDKNRHT--ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
              R    ++++ +    E+   E+ EA  A+ YG +KYADL ++R  +Y FSFD ML+ +
Sbjct: 408  KSRCAATIRERRQEAGEEIVEAEVEEAACAMGYGAVKYADLKNHRTTNYKFSFDDMLNLK 467

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTAVYLLYA+ RIA I R  G   +D+   A STPV+LEH KE  LA  L ++ + L  
Sbjct: 468  GNTAVYLLYAHARIAGIVRKGG---KDVYALAASTPVTLEHPKELELALHLTKLPEALED 524

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
               +L  + + +YLYD+S  F+ FY +C  +  + E         RLLL EATA VM+KC
Sbjct: 525  AIEELAPNRITDYLYDLSEKFNSFYVDCKVLGSEQEAS-------RLLLVEATAVVMRKC 577

Query: 1061 FDILNIR 1067
            F++L I+
Sbjct: 578  FELLGIK 584



 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 163/359 (45%), Positives = 228/359 (63%), Gaps = 19/359 (5%)

Query: 79  VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CK 137
           V  +D  SVR  ++D+F  A+  A+P  G +    A  N K     GD+QCN+AMAL  K
Sbjct: 2   VHTKDHGSVRAEVADLFRSALNTAYPNAGIEPVVAACNNAKN----GDYQCNNAMALFGK 57

Query: 138 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 197
           +   +   K P D+A +I       LA  P+   +I +  +A PGF+N+ L++     ++
Sbjct: 58  LKGTENAPKAPRDVANAI-------LAALPA-NDLISETSLAGPGFINIRLNKDALARRV 109

Query: 198 KDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 255
             ++ +G+    P  +   +V++DFSSPN+AKEMHVGHLRSTIIGDT+ R+ EY G DV+
Sbjct: 110 GSMLTDGLAKFAPEGHAGKKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRVFEYCGSDVL 169

Query: 256 RLNHVGDWGTQFGMLIAHLQD--KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 313
           RLNHVGDWGTQFGMLI H+ D  K  D   K   +ADLQ  Y+ +KKRFDE+E FK RA 
Sbjct: 170 RLNHVGDWGTQFGMLIEHMADTRKARD-ADKDEDVADLQELYRAAKKRFDEEEEFKTRAR 228

Query: 314 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 373
           + V  LQ  D     +W+ IC  SRR+F+ +Y RL VTL ERGESFY   ++ +V  L++
Sbjct: 229 EAVTRLQSGDATSLASWQRICAASRREFEALYTRLGVTLQERGESFYNPMLKGIVDGLKE 288

Query: 374 KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            G+  +DDG   ++ E + S+P+ + KSDGGF Y ++D+AA+  R+ EEKADWI+YVTD
Sbjct: 289 TGVATIDDGATCVFVEGQ-SVPLIVQKSDGGFGYASTDMAALHHRLNEEKADWIIYVTD 346



 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 163/359 (45%), Positives = 228/359 (63%), Gaps = 19/359 (5%)

Query: 1096 VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CK 1154
            V  +D  SVR  ++D+F  A+  A+P  G +    A  N K     GD+QCN+AMAL  K
Sbjct: 2    VHTKDHGSVRAEVADLFRSALNTAYPNAGIEPVVAACNNAKN----GDYQCNNAMALFGK 57

Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
            +   +   K P D+A +I       LA  P+   +I +  +A PGF+N+ L++     ++
Sbjct: 58   LKGTENAPKAPRDVANAI-------LAALPA-NDLISETSLAGPGFINIRLNKDALARRV 109

Query: 1215 KDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 1272
              ++ +G+    P  +   +V++DFSSPN+AKEMHVGHLRSTIIGDT+ R+ EY G DV+
Sbjct: 110  GSMLTDGLAKFAPEGHAGKKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRVFEYCGSDVL 169

Query: 1273 RLNHVGDWGTQFGMLIAHLQD--KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 1330
            RLNHVGDWGTQFGMLI H+ D  K  D   K   +ADLQ  Y+ +KKRFDE+E FK RA 
Sbjct: 170  RLNHVGDWGTQFGMLIEHMADTRKARD-ADKDEDVADLQELYRAAKKRFDEEEEFKTRAR 228

Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 1390
            + V  LQ  D     +W+ IC  SRR+F+ +Y RL VTL ERGESFY   ++ +V  L++
Sbjct: 229  EAVTRLQSGDATSLASWQRICAASRREFEALYTRLGVTLQERGESFYNPMLKGIVDGLKE 288

Query: 1391 KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             G+  +DDG   ++ E + S+P+ + KSDGGF Y ++D+AA+  R+ EEKADWI+YVTD
Sbjct: 289  TGVATIDDGATCVFVEGQ-SVPLIVQKSDGGFGYASTDMAALHHRLNEEKADWIIYVTD 346


>gi|425434314|ref|ZP_18814783.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
 gi|389676232|emb|CCH94720.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
          Length = 585

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/574 (46%), Positives = 377/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ ++KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIAYSLADLEKRLASEEREETGDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               IKYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAIKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLSLLGI 579



 Score =  301 bits (772), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQ 354



 Score =  301 bits (772), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQ 354


>gi|443655283|ref|ZP_21131449.1| arginyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
 gi|159030666|emb|CAO88336.1| argS [Microcystis aeruginosa PCC 7806]
 gi|443333666|gb|ELS48216.1| arginyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
          Length = 585

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/574 (46%), Positives = 376/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPGYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  LE++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELEQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ E+KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   ++   + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIANTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLSLLGI 579



 Score =  303 bits (775), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 160/340 (47%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQPPEIAGPGFINLTLKPGYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  LE++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLETVIRELEQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354



 Score =  303 bits (775), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 160/340 (47%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPGYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  LE++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELEQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354


>gi|440752664|ref|ZP_20931867.1| arginyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
 gi|440177157|gb|ELP56430.1| arginyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
          Length = 585

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/574 (46%), Positives = 377/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVATT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ E+KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIAYSLADLEKRLASEEREETGDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLSLLGI 579



 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVATT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLETVIRELDQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354



 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVATT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354


>gi|2632103|emb|CAB11467.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 589

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/562 (47%), Positives = 375/562 (66%), Gaps = 30/562 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQS-IASVVTSELATNPSLAKVIDKIEVAK 570
            KFGD+QCN+AM L  + K KG + + P  + Q+ I S+ TSE+         ++   +A 
Sbjct: 44   KFGDYQCNNAMGLWSLIKGKGTQFRGPPAVGQALIQSLPTSEM---------VESCSIAG 94

Query: 571  PGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            PGFVNV LS  +  + I++++V+G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 95   PGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTI 153

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS-PPIADLQAFYKE 687
            IGDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD  + +   I DLQ FY+E
Sbjct: 154  IGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTESVTETAIGDLQVFYRE 213

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            SK +FD +  FK++A Q VV LQ  DP Y++AW  IC++SR +F K+Y RL + L E+GE
Sbjct: 214  SKLKFDLNPEFKEKAQQAVVRLQGGDPVYRQAWAKICEISRNEFAKVYKRLRIELEEKGE 273

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 807
            SFY  ++  ++  L  KGL+E   G ++++ E    IP+ +VKSDGGF Y ++DL A+  
Sbjct: 274  SFYNPYIANVIEELSSKGLVEESKGARVIFIEGF-KIPLIVVKSDGGFNYASTDLTALWY 332

Query: 808  RIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL-NPNKT--RMDFVGFGVVLGEDRKK 864
            R+ EEKA+WI+YVTD+GQ  HF +  + A+KAG L + +KT  R+  VGFG+VLG+D K+
Sbjct: 333  RLNEEKAEWIIYVTDVGQQQHFDMFFKAARKAGWLPDDDKTYPRVSHVGFGLVLGDDNKR 392

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            F+TR+ + V+L++LLDE   RS   L ++ +  E +P EL +  +AV YG +KYADL  N
Sbjct: 393  FRTRAAEVVRLADLLDEAKDRSKAALIERGKDKEWSPEELDQIAEAVGYGALKYADLKTN 452

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R   Y FSFD+ML+D+G+TAVYLLYA+ RI SI R +G + ++L+   ++  ++L+H  E
Sbjct: 453  RITGYTFSFDQMLNDKGDTAVYLLYAHARICSIIRKSGKDIDELK---KTGKIALDHAAE 509

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +      L  + LC+YLY +S  F++FY NC  +   AE       T
Sbjct: 510  RALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSNCQ-VNGSAE------ET 562

Query: 1045 GRLLLAEATAKVMKKCFDILNI 1066
             RLLL E TA VM+KCF +L I
Sbjct: 563  SRLLLCE-TAIVMRKCFHLLGI 583



 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/315 (50%), Positives = 218/315 (69%), Gaps = 16/315 (5%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQS-IASVVTSELATNPSLAKVIDKIEVAK 180
           KFGD+QCN+AM L  + K KG + + P  + Q+ I S+ TSE+         ++   +A 
Sbjct: 44  KFGDYQCNNAMGLWSLIKGKGTQFRGPPAVGQALIQSLPTSEM---------VESCSIAG 94

Query: 181 PGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           PGFVNV LS  +  + I++++V+G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 95  PGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTI 153

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS-PPIADLQAFYKE 297
           IGDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD  + +   I DLQ FY+E
Sbjct: 154 IGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTESVTETAIGDLQVFYRE 213

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           SK +FD +  FK++A Q VV LQ  DP Y++AW  IC++SR +F K+Y RL + L E+GE
Sbjct: 214 SKLKFDLNPEFKEKAQQAVVRLQGGDPVYRQAWAKICEISRNEFAKVYKRLRIELEEKGE 273

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 417
           SFY  ++  ++  L  KGL+E   G ++++ E    IP+ +VKSDGGF Y ++DL A+  
Sbjct: 274 SFYNPYIANVIEELSSKGLVEESKGARVIFIEGF-KIPLIVVKSDGGFNYASTDLTALWY 332

Query: 418 RIEEEKADWIVYVTD 432
           R+ EEKA+WI+YVTD
Sbjct: 333 RLNEEKAEWIIYVTD 347



 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/315 (50%), Positives = 218/315 (69%), Gaps = 16/315 (5%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQS-IASVVTSELATNPSLAKVIDKIEVAK 1197
            KFGD+QCN+AM L  + K KG + + P  + Q+ I S+ TSE+         ++   +A 
Sbjct: 44   KFGDYQCNNAMGLWSLIKGKGTQFRGPPAVGQALIQSLPTSEM---------VESCSIAG 94

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            PGFVNV LS  +  + I++++V+G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 95   PGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTI 153

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS-PPIADLQAFYKE 1314
            IGDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD  + +   I DLQ FY+E
Sbjct: 154  IGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTESVTETAIGDLQVFYRE 213

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            SK +FD +  FK++A Q VV LQ  DP Y++AW  IC++SR +F K+Y RL + L E+GE
Sbjct: 214  SKLKFDLNPEFKEKAQQAVVRLQGGDPVYRQAWAKICEISRNEFAKVYKRLRIELEEKGE 273

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 1434
            SFY  ++  ++  L  KGL+E   G ++++ E    IP+ +VKSDGGF Y ++DL A+  
Sbjct: 274  SFYNPYIANVIEELSSKGLVEESKGARVIFIEGF-KIPLIVVKSDGGFNYASTDLTALWY 332

Query: 1435 RIEEEKADWIVYVTD 1449
            R+ EEKA+WI+YVTD
Sbjct: 333  RLNEEKAEWIIYVTD 347


>gi|390439638|ref|ZP_10228021.1| Arginyl-tRNA synthetase [Microcystis sp. T1-4]
 gi|389836918|emb|CCI32145.1| Arginyl-tRNA synthetase [Microcystis sp. T1-4]
          Length = 585

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/574 (46%), Positives = 376/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVATT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  LE++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELEQQGLLTEDNGALCVFLDGFTNKEGYPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ ++KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLTSEEREETSDFMAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RLLL + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLLLCDLTARTLKLGLYLLGI 579



 Score =  301 bits (770), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 223/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVATT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  LE++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLETVIRELEQQGLLTEDNGALCVFLDGFTNKEGYPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQ 354



 Score =  301 bits (770), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 223/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVATT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  LE++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELEQQGLLTEDNGALCVFLDGFTNKEGYPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQ 354


>gi|74185395|dbj|BAE30171.1| unnamed protein product [Mus musculus]
          Length = 397

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/393 (61%), Positives = 303/393 (77%), Gaps = 2/393 (0%)

Query: 676  PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIY 735
            PPI DLQAFYKESKKRFD DE FKKRAYQCVV LQ  +PD  KAW +ICDVSR +F+KIY
Sbjct: 1    PPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIY 60

Query: 736  DRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 795
            D L++TL ERGESFYQ  M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+
Sbjct: 61   DALDITLIERGESFYQDRMKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGY 119

Query: 796  TYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFG 855
            TYDTSDLAAI+QR+ EEKA+ I+YV D GQ +HF+ +   A+  G  +P  T +  VGFG
Sbjct: 120  TYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFG 179

Query: 856  VVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGC 915
            VVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DKLK+K R   LT  EL  AQ +VAYGC
Sbjct: 180  VVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGC 239

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
            IKYADLSHNR  DY+FSFDKMLDDRGNTA YLLYA+TRI SIAR A I+   L+ AA+ T
Sbjct: 240  IKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANIDEAMLQRAARET 299

Query: 976  PVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDA 1035
             + L+HEKE+ L + +LR  ++L  +  DL LH LC+Y+Y+++T F+EFYD+CYC+EKD 
Sbjct: 300  KIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDR 359

Query: 1036 E-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            + GK+  V+  R+LL EA A VM K FDIL I+
Sbjct: 360  QTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 392



 Score =  205 bits (521), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/148 (66%), Positives = 120/148 (81%), Gaps = 1/148 (0%)

Query: 286 PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIY 345
           PPI DLQAFYKESKKRFD DE FKKRAYQCVV LQ  +PD  KAW +ICDVSR +F+KIY
Sbjct: 1   PPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIY 60

Query: 346 DRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 405
           D L++TL ERGESFYQ  M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+
Sbjct: 61  DALDITLIERGESFYQDRMKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGY 119

Query: 406 TYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 120 TYDTSDLAAIKQRLFEEKANKIIYVVDN 147



 Score =  205 bits (521), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/148 (66%), Positives = 120/148 (81%), Gaps = 1/148 (0%)

Query: 1303 PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIY 1362
            PPI DLQAFYKESKKRFD DE FKKRAYQCVV LQ  +PD  KAW +ICDVSR +F+KIY
Sbjct: 1    PPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIY 60

Query: 1363 DRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 1422
            D L++TL ERGESFYQ  M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+
Sbjct: 61   DALDITLIERGESFYQDRMKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGY 119

Query: 1423 TYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 120  TYDTSDLAAIKQRLFEEKANKIIYVVDN 147


>gi|301114575|ref|XP_002999057.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262111151|gb|EEY69203.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 815

 Score =  491 bits (1264), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/596 (42%), Positives = 371/596 (62%), Gaps = 23/596 (3%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK-GE 534
            ++ + +  +F  A++ A+P L      V  TN K   KFGD+QCN AM++    K     
Sbjct: 232  NILEVVESLFDAAIKAAYPGLDVPPVEVTRTNVKNA-KFGDYQCNSAMSIFTALKGTPNA 290

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             ++P D+A +I       +A  P   +V+D++ VA  GF+N FL++ +   ++++++ NG
Sbjct: 291  ARSPRDVANTI-------IAAMPE-TRVLDRLTVAGAGFINAFLTKEFVAARLQNVLANG 342

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            VQP    KK  ++VDFSSPNIAK+MHVGHLRSTIIGDT+SR+LE+ G+DV R+NHVGDWG
Sbjct: 343  VQPAP-QKKQTIVVDFSSPNIAKDMHVGHLRSTIIGDTMSRILEFQGYDVKRINHVGDWG 401

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLI HL + +P + T+ P + DL   YK +K+RFD D  F +R+   VV LQ  D 
Sbjct: 402  TQFGMLICHLTETYPTWETEMPNVTDLTKLYKAAKERFDADADFHERSKAQVVLLQSGDE 461

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            + +K WE +C++SRR+FQK+YDRL V+L E GESFY   +  ++  L  KG++E+ +G +
Sbjct: 462  NSRKVWETLCEISRREFQKVYDRLGVSLNEMGESFYNPIIPDVLAKLRAKGIVEMSNGAE 521

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            +++ +     P  +VKSDG + YDT+D+AA+  R+ E KAD I+Y TD  Q  HF LL E
Sbjct: 522  VVFTKAFKQ-PFMLVKSDGSYLYDTTDIAALWYRLHEMKADRIIYYTDYTQKDHFSLLFE 580

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK- 893
              + +GI +P K R D VGFG V  E  K+FKTRSG TV+L ELLDE   R   +L ++ 
Sbjct: 581  VGRMSGIYDPTKQRADHVGFGTVNDESGKRFKTRSGKTVRLVELLDEAKVRMKAQLVERI 640

Query: 894  -NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
                T L   ++  A + + YG +KY DL  +   +Y+FSFD+ML   G+TAVYL++AY 
Sbjct: 641  EAGQTSLPMDQVDAAAEKLGYGAVKYFDLRQSPTSNYIFSFDRMLSTNGDTAVYLMFAYA 700

Query: 953  RIASIARTAGINSEDL--RVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            R++SI R +G++   L  ++  +   +  EH  E ALA  LL++ DV++ + +DL  + L
Sbjct: 701  RLSSIIRKSGVDMSALVAQLQKEGNVLKPEHPTEQALAIELLQLQDVIVFINKDLSSNRL 760

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            C YLY IS     F   C  +  + +         RLLL +AT KVMK CF +L I
Sbjct: 761  CSYLYTISEKVQTFVTACRVLGSEEQ-------NSRLLLCDATLKVMKTCFSLLGI 809



 Score =  318 bits (815), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 231/349 (66%), Gaps = 12/349 (3%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK-GE 144
           ++ + +  +F  A++ A+P L      V  TN K   KFGD+QCN AM++    K     
Sbjct: 232 NILEVVESLFDAAIKAAYPGLDVPPVEVTRTNVKNA-KFGDYQCNSAMSIFTALKGTPNA 290

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            ++P D+A +I       +A  P   +V+D++ VA  GF+N FL++ +   ++++++ NG
Sbjct: 291 ARSPRDVANTI-------IAAMPE-TRVLDRLTVAGAGFINAFLTKEFVAARLQNVLANG 342

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           VQP    KK  ++VDFSSPNIAK+MHVGHLRSTIIGDT+SR+LE+ G+DV R+NHVGDWG
Sbjct: 343 VQPAP-QKKQTIVVDFSSPNIAKDMHVGHLRSTIIGDTMSRILEFQGYDVKRINHVGDWG 401

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLI HL + +P + T+ P + DL   YK +K+RFD D  F +R+   VV LQ  D 
Sbjct: 402 TQFGMLICHLTETYPTWETEMPNVTDLTKLYKAAKERFDADADFHERSKAQVVLLQSGDE 461

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
           + +K WE +C++SRR+FQK+YDRL V+L E GESFY   +  ++  L  KG++E+ +G +
Sbjct: 462 NSRKVWETLCEISRREFQKVYDRLGVSLNEMGESFYNPIIPDVLAKLRAKGIVEMSNGAE 521

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           +++ +     P  +VKSDG + YDT+D+AA+  R+ E KAD I+Y TD+
Sbjct: 522 VVFTKAFKQ-PFMLVKSDGSYLYDTTDIAALWYRLHEMKADRIIYYTDY 569



 Score =  318 bits (815), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 231/349 (66%), Gaps = 12/349 (3%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK-GE 1161
            ++ + +  +F  A++ A+P L      V  TN K   KFGD+QCN AM++    K     
Sbjct: 232  NILEVVESLFDAAIKAAYPGLDVPPVEVTRTNVKNA-KFGDYQCNSAMSIFTALKGTPNA 290

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             ++P D+A +I       +A  P   +V+D++ VA  GF+N FL++ +   ++++++ NG
Sbjct: 291  ARSPRDVANTI-------IAAMPE-TRVLDRLTVAGAGFINAFLTKEFVAARLQNVLANG 342

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            VQP    KK  ++VDFSSPNIAK+MHVGHLRSTIIGDT+SR+LE+ G+DV R+NHVGDWG
Sbjct: 343  VQPAP-QKKQTIVVDFSSPNIAKDMHVGHLRSTIIGDTMSRILEFQGYDVKRINHVGDWG 401

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLI HL + +P + T+ P + DL   YK +K+RFD D  F +R+   VV LQ  D 
Sbjct: 402  TQFGMLICHLTETYPTWETEMPNVTDLTKLYKAAKERFDADADFHERSKAQVVLLQSGDE 461

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            + +K WE +C++SRR+FQK+YDRL V+L E GESFY   +  ++  L  KG++E+ +G +
Sbjct: 462  NSRKVWETLCEISRREFQKVYDRLGVSLNEMGESFYNPIIPDVLAKLRAKGIVEMSNGAE 521

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            +++ +     P  +VKSDG + YDT+D+AA+  R+ E KAD I+Y TD+
Sbjct: 522  VVFTKAFKQ-PFMLVKSDGSYLYDTTDIAALWYRLHEMKADRIIYYTDY 569


>gi|297738741|emb|CBI27986.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/642 (42%), Positives = 383/642 (59%), Gaps = 73/642 (11%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            +V+  LS +F  ++++  P   D    +A+       KFGD+QCN+AM L    K+K  K
Sbjct: 66   TVKKQLSKLFEQSLRITVPSESDVEPLIAAC----APKFGDYQCNNAMGLWSRIKNK--K 119

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVA-------------------------- 569
             N F    +I  V+   L       ++I+K  +A                          
Sbjct: 120  DNGFKGPPTIGKVIMENLPP----TEMIEKCTLAGPGFVNIKLSTSXXXXXXXXXXXXXX 175

Query: 570  -------------------KPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLV 608
                                PGFVN+ LS  +  + I+ +++ G++   P L  K R +V
Sbjct: 176  XXXXXXXXXXXXXXXXXXXXPGFVNIKLSTSWIAKNIQKMLIIGIETWAPRLPIK-RAVV 234

Query: 609  DFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKF 668
            DFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVGDWGTQFGMLI  L DKF
Sbjct: 235  DFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDWGTQFGMLIEFLFDKF 294

Query: 669  PDYLTKSP-PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 727
            P++   S   I DLQ FYK SKKRFDED  FK RA Q VV LQ  +  Y++AW  IC++S
Sbjct: 295  PNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRLQGGETSYRRAWAQICEIS 354

Query: 728  RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 787
            R +F K+Y RL V L E+GESFY  ++  ++  L  +GL+E   G +++  E   +IP+ 
Sbjct: 355  RNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEESQGARVIHIEGV-NIPLI 413

Query: 788  IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKT 847
            +VKSDGG+ Y ++D+AA+  R+ EEKA+WI+YVTD+GQ  HF ++   AK AG L  N  
Sbjct: 414  VVKSDGGYNYASTDMAALWYRLNEEKAEWIIYVTDVGQQQHFEMVFSAAKLAGWLPANDN 473

Query: 848  ---RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTEL 904
               +   VGFG+VLGED K+F+TR+ + V+L +LLDE   RS   L ++ +  E T  EL
Sbjct: 474  MYPKASHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKNRSKSVLIERGKAAEWTEQEL 533

Query: 905  SEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGIN 964
                +AV YG +KYADL +NR  +Y F+FD+ML+D+GNTAVYLLYA+ RI SI R +G +
Sbjct: 534  EHTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKD 593

Query: 965  SEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEF 1024
             ++L+   ++  ++L+H+ E  L   LL+ ++V+     +L  + LCEYLY++S  F++F
Sbjct: 594  IDELK---KTGVLTLDHDDERGLGLHLLQFSEVVEEACTNLLPNVLCEYLYNLSENFTKF 650

Query: 1025 YDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            Y NC  +    E       T RLLL EATA VM+KCF +L I
Sbjct: 651  YSNCQVVGSAEE-------TSRLLLCEATAVVMRKCFHLLGI 685



 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 165/395 (41%), Positives = 228/395 (57%), Gaps = 60/395 (15%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           +V+  LS +F  ++++  P   D    +A+       KFGD+QCN+AM L    K+K  K
Sbjct: 66  TVKKQLSKLFEQSLRITVPSESDVEPLIAAC----APKFGDYQCNNAMGLWSRIKNK--K 119

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVA-------------------------- 179
            N F    +I  V+   L       ++I+K  +A                          
Sbjct: 120 DNGFKGPPTIGKVIMENLPP----TEMIEKCTLAGPGFVNIKLSTSXXXXXXXXXXXXXX 175

Query: 180 -------------------KPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLV 218
                               PGFVN+ LS  +  + I+ +++ G++   P L  K R +V
Sbjct: 176 XXXXXXXXXXXXXXXXXXXXPGFVNIKLSTSWIAKNIQKMLIIGIETWAPRLPIK-RAVV 234

Query: 219 DFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKF 278
           DFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVGDWGTQFGMLI  L DKF
Sbjct: 235 DFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDWGTQFGMLIEFLFDKF 294

Query: 279 PDYLTKSP-PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 337
           P++   S   I DLQ FYK SKKRFDED  FK RA Q VV LQ  +  Y++AW  IC++S
Sbjct: 295 PNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRLQGGETSYRRAWAQICEIS 354

Query: 338 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 397
           R +F K+Y RL V L E+GESFY  ++  ++  L  +GL+E   G +++  E   +IP+ 
Sbjct: 355 RNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEESQGARVIHIEGV-NIPLI 413

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +VKSDGG+ Y ++D+AA+  R+ EEKA+WI+YVTD
Sbjct: 414 VVKSDGGYNYASTDMAALWYRLNEEKAEWIIYVTD 448



 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 165/395 (41%), Positives = 228/395 (57%), Gaps = 60/395 (15%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            +V+  LS +F  ++++  P   D    +A+       KFGD+QCN+AM L    K+K  K
Sbjct: 66   TVKKQLSKLFEQSLRITVPSESDVEPLIAAC----APKFGDYQCNNAMGLWSRIKNK--K 119

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVA-------------------------- 1196
             N F    +I  V+   L       ++I+K  +A                          
Sbjct: 120  DNGFKGPPTIGKVIMENLPP----TEMIEKCTLAGPGFVNIKLSTSXXXXXXXXXXXXXX 175

Query: 1197 -------------------KPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLV 1235
                                PGFVN+ LS  +  + I+ +++ G++   P L  K R +V
Sbjct: 176  XXXXXXXXXXXXXXXXXXXXPGFVNIKLSTSWIAKNIQKMLIIGIETWAPRLPIK-RAVV 234

Query: 1236 DFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKF 1295
            DFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   DV+R NHVGDWGTQFGMLI  L DKF
Sbjct: 235  DFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDWGTQFGMLIEFLFDKF 294

Query: 1296 PDYLTKSP-PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVS 1354
            P++   S   I DLQ FYK SKKRFDED  FK RA Q VV LQ  +  Y++AW  IC++S
Sbjct: 295  PNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRLQGGETSYRRAWAQICEIS 354

Query: 1355 RRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMT 1414
            R +F K+Y RL V L E+GESFY  ++  ++  L  +GL+E   G +++  E   +IP+ 
Sbjct: 355  RNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEESQGARVIHIEGV-NIPLI 413

Query: 1415 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +VKSDGG+ Y ++D+AA+  R+ EEKA+WI+YVTD
Sbjct: 414  VVKSDGGYNYASTDMAALWYRLNEEKAEWIIYVTD 448


>gi|425445589|ref|ZP_18825617.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
 gi|389734404|emb|CCI01945.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
          Length = 585

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/574 (46%), Positives = 377/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEGVIRELDQQGLLIEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ ++KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLSLLGI 579



 Score =  300 bits (768), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLEGVIRELDQQGLLIEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQ 354



 Score =  300 bits (768), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEGVIRELDQQGLLIEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQ 354


>gi|302755802|ref|XP_002961325.1| hypothetical protein SELMODRAFT_140217 [Selaginella moellendorffii]
 gi|300172264|gb|EFJ38864.1| hypothetical protein SELMODRAFT_140217 [Selaginella moellendorffii]
          Length = 595

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 270/597 (45%), Positives = 372/597 (62%), Gaps = 29/597 (4%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK-GE 534
            ++R  LS +   + Q    E G+   +VA+        FGD+Q N+AM +    K K  E
Sbjct: 16   TIRQELSKIARESFQTTLGEWGNVEPAVAACANP---NFGDYQINNAMGIWSTIKGKETE 72

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             +NP +IAQSI          N      ++   VA PGF+NV LS VY  +++ +++++G
Sbjct: 73   FRNPREIAQSITR--------NFPQTGFVETTSVAGPGFINVKLSSVYIAKRLNELLLHG 124

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            +    P L  K R +VDFSSPNIAKEMHVGHLRSTIIGD ++ ++EY   +V+R NHVGD
Sbjct: 125  IDTWAPVLPVK-RAIVDFSSPNIAKEMHVGHLRSTIIGDCLANMIEYCKVEVLRRNHVGD 183

Query: 653  WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            WGTQFGMLI +L + FP++       I DLQAFYKESK RFD DE FK +A Q VV LQ 
Sbjct: 184  WGTQFGMLIEYLFEMFPNWEDIGDQAIGDLQAFYKESKVRFDADEEFKAKAQQAVVKLQS 243

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             D  Y+ AW+++C++SR +FQ++YDRL V+L E+GESFY  ++   +  L  KG+LE  D
Sbjct: 244  GDAKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPYIPDAIQILRDKGILEESD 303

Query: 772  GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            G  +++  D   IP+  +K DGGF Y ++DLAA+  R+  EK +WI+YVTD+GQ  HF +
Sbjct: 304  GATVIF-VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEKVEWIIYVTDVGQHQHFDM 362

Query: 832  LEECAKKAGIL-NPNKTRMDFVGFGVVLGEDRKKFKTRSG-DTVKLSELLDEGLRRSLDK 889
            L + AK+A  L      R   VGFG+VLG D K+F+TR G   V+L +LLDE   RS   
Sbjct: 363  LFKAAKRAEWLPKEGYPRTQHVGFGLVLGADGKRFRTRQGTGLVRLVDLLDEAKSRSKTA 422

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            L ++ R  E +P +L  A ++V YG +KYADL +NR  +Y FSF++MLD RGNTAVYLLY
Sbjct: 423  LIERGRDDEWSPEDLDAAAESVGYGAVKYADLKNNRETNYTFSFEQMLDVRGNTAVYLLY 482

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            AY RI SI R +G + ++L+   ++  + L H  E AL   L++ ++V+      L  + 
Sbjct: 483  AYARIRSIIRKSGKSIDELK---ENGAIVLTHPDERALGLFLIQFSEVVEDAVTRLLPNT 539

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            LCEYLY++S  F+ FY +C       E       T RLLL EATA VMK+CF +L I
Sbjct: 540  LCEYLYNLSENFTRFYTSCKVNGSPEE-------TSRLLLCEATAIVMKQCFKLLGI 589



 Score =  307 bits (786), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 167/375 (44%), Positives = 234/375 (62%), Gaps = 22/375 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK-GE 144
           ++R  LS +   + Q    E G+   +VA+        FGD+Q N+AM +    K K  E
Sbjct: 16  TIRQELSKIARESFQTTLGEWGNVEPAVAACANP---NFGDYQINNAMGIWSTIKGKETE 72

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            +NP +IAQSI          N      ++   VA PGF+NV LS VY  +++ +++++G
Sbjct: 73  FRNPREIAQSITR--------NFPQTGFVETTSVAGPGFINVKLSSVYIAKRLNELLLHG 124

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           +    P L  K R +VDFSSPNIAKEMHVGHLRSTIIGD ++ ++EY   +V+R NHVGD
Sbjct: 125 IDTWAPVLPVK-RAIVDFSSPNIAKEMHVGHLRSTIIGDCLANMIEYCKVEVLRRNHVGD 183

Query: 263 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           WGTQFGMLI +L + FP++       I DLQAFYKESK RFD DE FK +A Q VV LQ 
Sbjct: 184 WGTQFGMLIEYLFEMFPNWEDIGDQAIGDLQAFYKESKVRFDADEEFKAKAQQAVVKLQS 243

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            D  Y+ AW+++C++SR +FQ++YDRL V+L E+GESFY  ++   +  L  KG+LE  D
Sbjct: 244 GDAKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPYIPDAIQILRDKGILEESD 303

Query: 382 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQ 438
           G  +++  D   IP+  +K DGGF Y ++DLAA+  R+  EK +WI+YVTD   H+ +  
Sbjct: 304 GATVIF-VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEKVEWIIYVTDVGQHQHFDM 362

Query: 439 VLQAI--AEEEKKQG 451
           + +A   AE   K+G
Sbjct: 363 LFKAAKRAEWLPKEG 377



 Score =  305 bits (782), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 161/351 (45%), Positives = 223/351 (63%), Gaps = 17/351 (4%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK-GE 1161
            ++R  LS +   + Q    E G+   +VA+        FGD+Q N+AM +    K K  E
Sbjct: 16   TIRQELSKIARESFQTTLGEWGNVEPAVAACANP---NFGDYQINNAMGIWSTIKGKETE 72

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             +NP +IAQSI          N      ++   VA PGF+NV LS VY  +++ +++++G
Sbjct: 73   FRNPREIAQSITR--------NFPQTGFVETTSVAGPGFINVKLSSVYIAKRLNELLLHG 124

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            +    P L  K R +VDFSSPNIAKEMHVGHLRSTIIGD ++ ++EY   +V+R NHVGD
Sbjct: 125  IDTWAPVLPVK-RAIVDFSSPNIAKEMHVGHLRSTIIGDCLANMIEYCKVEVLRRNHVGD 183

Query: 1280 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            WGTQFGMLI +L + FP++       I DLQAFYKESK RFD DE FK +A Q VV LQ 
Sbjct: 184  WGTQFGMLIEYLFEMFPNWEDIGDQAIGDLQAFYKESKVRFDADEEFKAKAQQAVVKLQS 243

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             D  Y+ AW+++C++SR +FQ++YDRL V+L E+GESFY  ++   +  L  KG+LE  D
Sbjct: 244  GDAKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPYIPDAIQILRDKGILEESD 303

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G  +++  D   IP+  +K DGGF Y ++DLAA+  R+  EK +WI+YVTD
Sbjct: 304  GATVIF-VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEKVEWIIYVTD 353


>gi|425455068|ref|ZP_18834793.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
 gi|389804124|emb|CCI17030.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
          Length = 585

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/574 (46%), Positives = 377/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEGVIRELDQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ ++KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVRQDKAEKIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLYLLGI 579



 Score =  300 bits (768), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLEGVIRELDQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVRQDKAEKIIYVTDAGQANHFAQVFQ 354



 Score =  300 bits (768), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEGVIRELDQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVRQDKAEKIIYVTDAGQANHFAQVFQ 354


>gi|425450050|ref|ZP_18829882.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
 gi|389769281|emb|CCI05830.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
          Length = 585

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/574 (46%), Positives = 376/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ E+KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIAYSLADLEKRLASEEREETGDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R   IN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGDINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLSLLGI 579



 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLETVIRELDQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354



 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLIEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354


>gi|425466530|ref|ZP_18845828.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
 gi|389830943|emb|CCI26739.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
          Length = 585

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/574 (45%), Positives = 373/574 (64%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K  +             V + L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQKPRE-------------VATTLLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPGYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ ++KA  I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVRQDKAARIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +    E   T+  +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETDDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLSLLGI 579



 Score =  298 bits (762), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 156/340 (45%), Positives = 220/340 (64%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K  +             V + L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQKPRE-------------VATTLLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQPPEIAGPGFINLTLKPGYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ ++KA  I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVRQDKAARIIYVTDAGQANHFAQVFQ 354



 Score =  298 bits (762), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 156/340 (45%), Positives = 220/340 (64%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K  +             V + L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQKPRE-------------VATTLLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPGYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ ++KA  I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVRQDKAARIIYVTDAGQANHFAQVFQ 354


>gi|422304131|ref|ZP_16391480.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
 gi|389790814|emb|CCI13351.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
          Length = 585

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/574 (45%), Positives = 375/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINITLKPGYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ ++KA  I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVRQDKAARIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETSDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++ + L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSSLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLYLLGI 579



 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 223/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQPPEIAGPGFINITLKPGYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ ++KA  I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVRQDKAARIIYVTDAGQANHFAQVFQ 354



 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 223/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINITLKPGYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ ++KA  I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVRQDKAARIIYVTDAGQANHFAQVFQ 354


>gi|166365931|ref|YP_001658204.1| arginyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083539|sp|B0JLI8.1|SYR_MICAN RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|166088304|dbj|BAG03012.1| arginyl-tRNA-synthetase [Microcystis aeruginosa NIES-843]
          Length = 585

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/574 (45%), Positives = 375/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ E+KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NR+ +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRHSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++ + L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSSLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLFLCDLTARTLKLGLSLLGI 579



 Score =  303 bits (775), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354



 Score =  303 bits (775), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +   T N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ E+KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354


>gi|425468947|ref|ZP_18847922.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
 gi|389884385|emb|CCI35305.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
          Length = 585

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/574 (45%), Positives = 372/574 (64%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K  +             V + L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQKPRE-------------VATTLLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFCHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ ++KA+ I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETSDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRNSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++ + L+ E E  LAK LL+  +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSSLILKDESELILAKQLLQFPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLSLLGI 579



 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 156/340 (45%), Positives = 221/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K  +             V + L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQKPRE-------------VATTLLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFCHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQ 354



 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 156/340 (45%), Positives = 221/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K  +             V + L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQKPRE-------------VATTLLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQPPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFCHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLETVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ ++KA+ I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVRQDKAERIIYVTDAGQANHFAQVFQ 354


>gi|209875223|ref|XP_002139054.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
 gi|209554660|gb|EEA04705.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 603

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/607 (42%), Positives = 384/607 (63%), Gaps = 38/607 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTA-SVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 539
            + +VF  +++  FPE  ++   S+++ N      FGD+QCN  M +          K+P 
Sbjct: 8    IKEVFNKSIKSLFPEYENEAVISISNPN------FGDYQCNSGMLIFSTIGKSMGMKSPR 61

Query: 540  DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 599
            +I + I   + S+    P+   + D I VA  GF+ V +S  +  + +++I+  G    T
Sbjct: 62   EIGEKIKQFIMSD----PNSNFLFDSIIVAPQGFITVKISTDFLRKNLQNILQRGEIQVT 117

Query: 600  L---------NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
            L         +KKL+VLVDFSSPNIAKEMHVGHLRSTIIGDTI R+ EYLG++V R+NHV
Sbjct: 118  LSSSPVKIIEDKKLKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRIFEYLGYEVFRINHV 177

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLI +L++++PDY +  P I+DLQ FY+ +KK+FD+D  FK R+ + VV LQ
Sbjct: 178  GDWGTQFGMLIEYLKEQYPDYTSNIPEISDLQEFYRSAKKKFDQDPEFKLRSQKVVVKLQ 237

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              DP  + AW+ IC++SR +FQK+YDRLN+ + E GESFY   + +++  +++KG+++LD
Sbjct: 238  GGDPTARAAWKKICEISRIEFQKVYDRLNIHIEEYGESFYNDLIPEVILKMKEKGIIQLD 297

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            DG + ++     +IP+  VKSDGG+ YD++DLAAI  R++E +ADW++Y+TD GQ  HF 
Sbjct: 298  DGAQCIF-TSVNNIPLMAVKSDGGYGYDSTDLAAIYYRLKEIRADWVIYITDSGQEEHFL 356

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
             + E AK     NP KTR+DFVGFGV+ GED KKFKTRSGDTVKL ELLDE + R+ ++L
Sbjct: 357  KIFEVAKIMEWHNPPKTRLDFVGFGVIQGEDGKKFKTRSGDTVKLVELLDEAVTRAYNEL 416

Query: 891  KDK-------NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             ++       N + E    +L E  + + Y  +KY D+  NR  +Y FSFD+MLD +GNT
Sbjct: 417  INRRLQNAKINGNIEYEDDDLKEMAKKIGYAAVKYFDMKQNRLTNYKFSFDRMLDPKGNT 476

Query: 944  AVYLLYAYTRIASIARTAGI---NSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            AVYLLYAY R+ +I R +G+   N  D+ + + S  ++++  +E  +A  ++R  +V   
Sbjct: 477  AVYLLYAYARLCAIFRRSGLNLDNKSDIEILS-SYSINIQQSEERLIALKIIRFPEVFDG 535

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE-KDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            +  DL ++ L EY Y++    ++FY +C  ++  D E     +   RL L     KV+  
Sbjct: 536  IIVDLHINRLTEYCYELCELVAQFYASCRILDCNDPE-----IRQSRLALCFIIKKVLLV 590

Query: 1060 CFDILNI 1066
              ++L I
Sbjct: 591  ALNLLGI 597



 Score =  318 bits (815), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 158/352 (44%), Positives = 236/352 (67%), Gaps = 21/352 (5%)

Query: 91  LSDVFTHAVQVAFPELGDKTA-SVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 149
           + +VF  +++  FPE  ++   S+++ N      FGD+QCN  M +          K+P 
Sbjct: 8   IKEVFNKSIKSLFPEYENEAVISISNPN------FGDYQCNSGMLIFSTIGKSMGMKSPR 61

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 209
           +I + I   + S+    P+   + D I VA  GF+ V +S  +  + +++I+  G    T
Sbjct: 62  EIGEKIKQFIMSD----PNSNFLFDSIIVAPQGFITVKISTDFLRKNLQNILQRGEIQVT 117

Query: 210 L---------NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
           L         +KKL+VLVDFSSPNIAKEMHVGHLRSTIIGDTI R+ EYLG++V R+NHV
Sbjct: 118 LSSSPVKIIEDKKLKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRIFEYLGYEVFRINHV 177

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGMLI +L++++PDY +  P I+DLQ FY+ +KK+FD+D  FK R+ + VV LQ
Sbjct: 178 GDWGTQFGMLIEYLKEQYPDYTSNIPEISDLQEFYRSAKKKFDQDPEFKLRSQKVVVKLQ 237

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             DP  + AW+ IC++SR +FQK+YDRLN+ + E GESFY   + +++  +++KG+++LD
Sbjct: 238 GGDPTARAAWKKICEISRIEFQKVYDRLNIHIEEYGESFYNDLIPEVILKMKEKGIIQLD 297

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           DG + ++     +IP+  VKSDGG+ YD++DLAAI  R++E +ADW++Y+TD
Sbjct: 298 DGAQCIF-TSVNNIPLMAVKSDGGYGYDSTDLAAIYYRLKEIRADWVIYITD 348



 Score =  318 bits (815), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 158/352 (44%), Positives = 236/352 (67%), Gaps = 21/352 (5%)

Query: 1108 LSDVFTHAVQVAFPELGDKTA-SVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 1166
            + +VF  +++  FPE  ++   S+++ N      FGD+QCN  M +          K+P 
Sbjct: 8    IKEVFNKSIKSLFPEYENEAVISISNPN------FGDYQCNSGMLIFSTIGKSMGMKSPR 61

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 1226
            +I + I   + S+    P+   + D I VA  GF+ V +S  +  + +++I+  G    T
Sbjct: 62   EIGEKIKQFIMSD----PNSNFLFDSIIVAPQGFITVKISTDFLRKNLQNILQRGEIQVT 117

Query: 1227 L---------NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
            L         +KKL+VLVDFSSPNIAKEMHVGHLRSTIIGDTI R+ EYLG++V R+NHV
Sbjct: 118  LSSSPVKIIEDKKLKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRIFEYLGYEVFRINHV 177

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLI +L++++PDY +  P I+DLQ FY+ +KK+FD+D  FK R+ + VV LQ
Sbjct: 178  GDWGTQFGMLIEYLKEQYPDYTSNIPEISDLQEFYRSAKKKFDQDPEFKLRSQKVVVKLQ 237

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              DP  + AW+ IC++SR +FQK+YDRLN+ + E GESFY   + +++  +++KG+++LD
Sbjct: 238  GGDPTARAAWKKICEISRIEFQKVYDRLNIHIEEYGESFYNDLIPEVILKMKEKGIIQLD 297

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DG + ++     +IP+  VKSDGG+ YD++DLAAI  R++E +ADW++Y+TD
Sbjct: 298  DGAQCIF-TSVNNIPLMAVKSDGGYGYDSTDLAAIYYRLKEIRADWVIYITD 348


>gi|297829930|ref|XP_002882847.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328687|gb|EFH59106.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 579

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/563 (46%), Positives = 365/563 (64%), Gaps = 36/563 (6%)

Query: 511  VHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVA 569
            V KF D+QCN+AM L    K KG +   P  +A++        L TN     +++   VA
Sbjct: 40   VGKFEDYQCNNAMGLWSKVKGKGTQFTRPLAVAEA--------LVTNLPTCDMVESCSVA 91

Query: 570  KPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 627
            +PG+VNV          I+++++NG++   PTL+ K R +VDFSSPNIAK+MHVGHLRST
Sbjct: 92   QPGYVNV---------SIENMLINGIETWAPTLSVK-RAVVDFSSPNIAKKMHVGHLRST 141

Query: 628  IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK-SPPIADLQAFYK 686
            IIGDTI+R+LEY   +V+R NHVGDWGTQFGMLI +L +KFPD  +     I D+Q+ YK
Sbjct: 142  IIGDTIARMLEYSNVEVLRRNHVGDWGTQFGMLIENLFEKFPDSNSAMETAIEDIQSLYK 201

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 746
             SK +FD D  FK++A Q VV LQ  DP Y K W+ +C++SR D+ +IY RL V L E+G
Sbjct: 202  PSKTKFDADLDFKRKAQQAVVRLQGGDPVYHKTWQKLCEISRADYAEIYQRLRVELEEKG 261

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIR 806
            ESFY+ ++  ++  L  KGL+E  DG ++M+ +D  + P  +VKSDGGFTYDT+DLAA+ 
Sbjct: 262  ESFYKPYIANMIEELNSKGLVEESDGARVMFIKDFKN-PCMLVKSDGGFTYDTTDLAALW 320

Query: 807  QRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNK---TRMDFVGFGVVLGEDRK 863
             R+ EEKA+WI+YVTD GQ  HF    + A++ G L  N     R+  V FGVV GED K
Sbjct: 321  YRLNEEKAEWIIYVTDAGQQEHFDRFFKAARQVGWLPDNDETYPRVSHVKFGVVKGEDGK 380

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
            +F+ R  + V L++LLDE   RS   L ++ +  E TP EL +  +A+ YG +KYADL +
Sbjct: 381  RFRNRDREIVPLADLLDEAKTRSKAALIERAKEKEWTPEELDQTAEAIGYGAVKYADLMN 440

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            N + DY FS+DKML+++GNTAVYLLYA+ RI SI + +G + ++L+   ++  ++L+H  
Sbjct: 441  NISTDYKFSYDKMLNEKGNTAVYLLYAHARICSIIKKSGKDIDELK---KTGKLALDHAN 497

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E AL   LL+  + +      L  H LCEYLYD+S  +++FY NC  +   AE       
Sbjct: 498  ERALGLHLLQFAETVEEACTKLLPHILCEYLYDLSEHYTKFYSNCQ-VNGSAE------E 550

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
            T RLLL EATA VM+KCF +L I
Sbjct: 551  TSRLLLCEATAIVMRKCFHLLGI 573



 Score =  303 bits (777), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 158/316 (50%), Positives = 215/316 (68%), Gaps = 23/316 (7%)

Query: 121 VHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVA 179
           V KF D+QCN+AM L    K KG +   P  +A++        L TN     +++   VA
Sbjct: 40  VGKFEDYQCNNAMGLWSKVKGKGTQFTRPLAVAEA--------LVTNLPTCDMVESCSVA 91

Query: 180 KPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 237
           +PG+VNV          I+++++NG++   PTL+ K R +VDFSSPNIAK+MHVGHLRST
Sbjct: 92  QPGYVNV---------SIENMLINGIETWAPTLSVK-RAVVDFSSPNIAKKMHVGHLRST 141

Query: 238 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK-SPPIADLQAFYK 296
           IIGDTI+R+LEY   +V+R NHVGDWGTQFGMLI +L +KFPD  +     I D+Q+ YK
Sbjct: 142 IIGDTIARMLEYSNVEVLRRNHVGDWGTQFGMLIENLFEKFPDSNSAMETAIEDIQSLYK 201

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 356
            SK +FD D  FK++A Q VV LQ  DP Y K W+ +C++SR D+ +IY RL V L E+G
Sbjct: 202 PSKTKFDADLDFKRKAQQAVVRLQGGDPVYHKTWQKLCEISRADYAEIYQRLRVELEEKG 261

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIR 416
           ESFY+ ++  ++  L  KGL+E  DG ++M+ +D  + P  +VKSDGGFTYDT+DLAA+ 
Sbjct: 262 ESFYKPYIANMIEELNSKGLVEESDGARVMFIKDFKN-PCMLVKSDGGFTYDTTDLAALW 320

Query: 417 QRIEEEKADWIVYVTD 432
            R+ EEKA+WI+YVTD
Sbjct: 321 YRLNEEKAEWIIYVTD 336



 Score =  303 bits (777), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 158/316 (50%), Positives = 215/316 (68%), Gaps = 23/316 (7%)

Query: 1138 VHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVA 1196
            V KF D+QCN+AM L    K KG +   P  +A++        L TN     +++   VA
Sbjct: 40   VGKFEDYQCNNAMGLWSKVKGKGTQFTRPLAVAEA--------LVTNLPTCDMVESCSVA 91

Query: 1197 KPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 1254
            +PG+VNV          I+++++NG++   PTL+ K R +VDFSSPNIAK+MHVGHLRST
Sbjct: 92   QPGYVNV---------SIENMLINGIETWAPTLSVK-RAVVDFSSPNIAKKMHVGHLRST 141

Query: 1255 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK-SPPIADLQAFYK 1313
            IIGDTI+R+LEY   +V+R NHVGDWGTQFGMLI +L +KFPD  +     I D+Q+ YK
Sbjct: 142  IIGDTIARMLEYSNVEVLRRNHVGDWGTQFGMLIENLFEKFPDSNSAMETAIEDIQSLYK 201

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
             SK +FD D  FK++A Q VV LQ  DP Y K W+ +C++SR D+ +IY RL V L E+G
Sbjct: 202  PSKTKFDADLDFKRKAQQAVVRLQGGDPVYHKTWQKLCEISRADYAEIYQRLRVELEEKG 261

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIR 1433
            ESFY+ ++  ++  L  KGL+E  DG ++M+ +D  + P  +VKSDGGFTYDT+DLAA+ 
Sbjct: 262  ESFYKPYIANMIEELNSKGLVEESDGARVMFIKDFKN-PCMLVKSDGGFTYDTTDLAALW 320

Query: 1434 QRIEEEKADWIVYVTD 1449
             R+ EEKA+WI+YVTD
Sbjct: 321  YRLNEEKAEWIIYVTD 336


>gi|297838167|ref|XP_002886965.1| hypothetical protein ARALYDRAFT_894178 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297332806|gb|EFH63224.1| hypothetical protein ARALYDRAFT_894178 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 623

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/561 (47%), Positives = 369/561 (65%), Gaps = 30/561 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
            KFGD+QCN+AM L  I K KG + K P  + Q+        L  N   +++++   +A P
Sbjct: 80   KFGDYQCNNAMGLWSIIKGKGTQFKGPPAVGQA--------LIKNLPSSEMVESCSIAGP 131

Query: 572  GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            GFVNV LS  +  + I++++++G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 132  GFVNVVLSAKWIAKSIENMLIDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTII 190

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKES 688
            GDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD        I DLQ FYK+S
Sbjct: 191  GDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTDSVTETAIGDLQMFYKKS 250

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 748
            K RFD D  FK++A Q VV LQ  DP Y+KAW  IC++SR +F K+Y RL V L E+GES
Sbjct: 251  KLRFDLDPEFKEKAQQAVVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGES 310

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 808
            FY  ++  ++  L  KGL+E ++G ++++ E   +IP+ +VKS+GGF Y ++DL A+  R
Sbjct: 311  FYNPYIANVIEELSSKGLVEENEGARVIFVEGF-NIPLMVVKSNGGFNYASTDLTALWYR 369

Query: 809  IEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL-NPNKT--RMDFVGFGVVLGEDRKKF 865
            + EEKA+WI+Y+TDLGQ  HF +  + A+KAG L + +KT  R++ VGFG+VLG D K+F
Sbjct: 370  LNEEKAEWIIYLTDLGQQQHFHMFFKAARKAGWLPDDDKTYPRVNHVGFGLVLGADNKRF 429

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            +TR+ + V+L +LLDE   RS   L ++    E TP EL +  +AV      YADL  NR
Sbjct: 430  RTRANEVVRLVDLLDEAKDRSKAALIERGMDKEWTPEELDQTAEAVD---TVYADLKTNR 486

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
               Y FSFD+ML+D+G+TAVYLLYA+ RI SI R +G + ++L+   ++  ++L+H  E 
Sbjct: 487  LTGYTFSFDQMLNDKGDTAVYLLYAHARICSIIRKSGKDIDELK---KTGKIALDHAAER 543

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
            AL   LL+  + +      L  + LC+YLY +S  F++FY NC  +   AE       T 
Sbjct: 544  ALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSNCQ-VNGSAE------ETS 596

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RLLL EATA VM+KCF +L I
Sbjct: 597  RLLLCEATAIVMRKCFYLLGI 617



 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 160/327 (48%), Positives = 222/327 (67%), Gaps = 17/327 (5%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
           KFGD+QCN+AM L  I K KG + K P  + Q+        L  N   +++++   +A P
Sbjct: 80  KFGDYQCNNAMGLWSIIKGKGTQFKGPPAVGQA--------LIKNLPSSEMVESCSIAGP 131

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           GFVNV LS  +  + I++++++G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 132 GFVNVVLSAKWIAKSIENMLIDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTII 190

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKES 298
           GDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD        I DLQ FYK+S
Sbjct: 191 GDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTDSVTETAIGDLQMFYKKS 250

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 358
           K RFD D  FK++A Q VV LQ  DP Y+KAW  IC++SR +F K+Y RL V L E+GES
Sbjct: 251 KLRFDLDPEFKEKAQQAVVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGES 310

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 418
           FY  ++  ++  L  KGL+E ++G ++++ E   +IP+ +VKS+GGF Y ++DL A+  R
Sbjct: 311 FYNPYIANVIEELSSKGLVEENEGARVIFVEGF-NIPLMVVKSNGGFNYASTDLTALWYR 369

Query: 419 IEEEKADWIVYVTD---HRSYHQVLQA 442
           + EEKA+WI+Y+TD    + +H   +A
Sbjct: 370 LNEEKAEWIIYLTDLGQQQHFHMFFKA 396



 Score =  310 bits (795), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 158/314 (50%), Positives = 217/314 (69%), Gaps = 14/314 (4%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
            KFGD+QCN+AM L  I K KG + K P  + Q+        L  N   +++++   +A P
Sbjct: 80   KFGDYQCNNAMGLWSIIKGKGTQFKGPPAVGQA--------LIKNLPSSEMVESCSIAGP 131

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            GFVNV LS  +  + I++++++G+    PTL+ K R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 132  GFVNVVLSAKWIAKSIENMLIDGIDTWAPTLSVK-RAVVDFSSPNIAKEMHVGHLRSTII 190

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKES 1315
            GDT++R+LEY   +V+R NHVGDWGTQFGMLI  L +KFPD        I DLQ FYK+S
Sbjct: 191  GDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFPDTDSVTETAIGDLQMFYKKS 250

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGES 1375
            K RFD D  FK++A Q VV LQ  DP Y+KAW  IC++SR +F K+Y RL V L E+GES
Sbjct: 251  KLRFDLDPEFKEKAQQAVVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGES 310

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR 1435
            FY  ++  ++  L  KGL+E ++G ++++ E   +IP+ +VKS+GGF Y ++DL A+  R
Sbjct: 311  FYNPYIANVIEELSSKGLVEENEGARVIFVEGF-NIPLMVVKSNGGFNYASTDLTALWYR 369

Query: 1436 IEEEKADWIVYVTD 1449
            + EEKA+WI+Y+TD
Sbjct: 370  LNEEKAEWIIYLTD 383


>gi|384248188|gb|EIE21673.1| arginyl-tRNA synthetase [Coccomyxa subellipsoidea C-169]
          Length = 596

 Score =  485 bits (1248), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 271/631 (42%), Positives = 391/631 (61%), Gaps = 55/631 (8%)

Query: 452  ISSSSSSQTKG--TAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEK 509
            ++S++ +QT G  T+    VP     SVR  L+ VF+ A++ AFP + D   +VA+TN +
Sbjct: 1    MASAAPAQTLGQFTSTAKRVP-----SVRTDLAGVFSTALRTAFPNV-DIQPAVAATNNR 54

Query: 510  YVHKFGDFQCNDAMALCKIFKDK-GEKKNPFDIAQSIASVV--TSELATNPSLAKVIDKI 566
                 GD+QCN+AMAL    K K G  KNP ++A +I + +  T+ +   P+LA      
Sbjct: 55   ---DHGDYQCNNAMALFGRMKGKEGAPKNPREVATAILNALPDTTAIDGTPTLAG----- 106

Query: 567  EVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
                PGF+N+ LS  +  E+I+ ++           K R +VDFSSPN+AKEMHVGHLRS
Sbjct: 107  ----PGFINIKLSSAWLSERIQILV-----------KQRAVVDFSSPNVAKEMHVGHLRS 151

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL--TKSPPIADLQAF 684
            TIIGDTI+R LE+ G D +R+NHVGDWGTQFGMLI H+ +  P  L  T +  ++DLQ  
Sbjct: 152  TIIGDTIARTLEFCGVDTLRINHVGDWGTQFGMLIQHIAETRPGGLQGTTTEEVSDLQTL 211

Query: 685  YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 744
            YK SK RFD +E FK RA + V  LQ  DP++ + W+ IC+ SR +F  IY RL+V +  
Sbjct: 212  YKASKARFDAEEDFKARAREAVTRLQSGDPEFLETWKRICEASRNEFDAIYHRLDVHILW 271

Query: 745  RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            RGES+Y   +  LV  L ++G+ E  +G K++  E   + P+ I KSDGG+ Y T+D+A 
Sbjct: 272  RGESWYNPRLTPLVEELIERGIAEESEGAKVITVEGLKT-PLMIRKSDGGYGYGTTDMAT 330

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNP-NKTRMDFVGFGVVLGEDRK 863
            + QRI +EKA+W++YVTD GQ  HF+L+    K+AGI+   N  R+D VGFG+VLG+D K
Sbjct: 331  LAQRIHDEKAEWLIYVTDEGQSGHFKLVFGAGKRAGIIPAKNPPRIDHVGFGLVLGQDGK 390

Query: 864  KFKTR-SGDTVKLSELLDEGLRRSLDKLKDKNRHT------ELTPTELSEAQQAVAYGCI 916
            + +TR SG  V+L ELLDE   R    +K++   T      EL+  E+      + YG +
Sbjct: 391  RIRTRDSGAAVRLVELLDEAKARCAASIKERQETTIERGGEELSAEEMENISSVMGYGAV 450

Query: 917  KYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP 976
            KYADL +NR  +Y F+FD+MLD +GNTAVY+LYA+ RIA I R +   ++D++  AQ+  
Sbjct: 451  KYADLKNNRATNYKFNFDEMLDLKGNTAVYMLYAHARIAGIIRKS---NKDIKEVAQTAH 507

Query: 977  VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE 1036
            +SL+H  E ALA  ++R  ++L     +L  + + EY+Y++S  F+ FY  C  + +  E
Sbjct: 508  ISLDHASERALALHIVRFTEMLEDTLVELAPNRITEYVYELSNYFNTFYVGCKVLGEKEE 567

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
                     RLLL EATA +M++CF +L I+
Sbjct: 568  DS-------RLLLCEATAMIMRQCFQLLGIK 591



 Score =  302 bits (773), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 167/378 (44%), Positives = 236/378 (62%), Gaps = 37/378 (9%)

Query: 62  ISSSISSQTKG--AAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEK 119
           ++S+  +QT G   +    VP     SVR  L+ VF+ A++ AFP + D   +VA+TN +
Sbjct: 1   MASAAPAQTLGQFTSTAKRVP-----SVRTDLAGVFSTALRTAFPNV-DIQPAVAATNNR 54

Query: 120 YVHKFGDFQCNDAMALCKIFKDK-GEKKNPFDIAQSIASVV--TSELATNPSLAKVIDKI 176
                GD+QCN+AMAL    K K G  KNP ++A +I + +  T+ +   P+LA      
Sbjct: 55  ---DHGDYQCNNAMALFGRMKGKEGAPKNPREVATAILNALPDTTAIDGTPTLAG----- 106

Query: 177 EVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
               PGF+N+ LS  +  E+I+ ++           K R +VDFSSPN+AKEMHVGHLRS
Sbjct: 107 ----PGFINIKLSSAWLSERIQILV-----------KQRAVVDFSSPNVAKEMHVGHLRS 151

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL--TKSPPIADLQAF 294
           TIIGDTI+R LE+ G D +R+NHVGDWGTQFGMLI H+ +  P  L  T +  ++DLQ  
Sbjct: 152 TIIGDTIARTLEFCGVDTLRINHVGDWGTQFGMLIQHIAETRPGGLQGTTTEEVSDLQTL 211

Query: 295 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 354
           YK SK RFD +E FK RA + V  LQ  DP++ + W+ IC+ SR +F  IY RL+V +  
Sbjct: 212 YKASKARFDAEEDFKARAREAVTRLQSGDPEFLETWKRICEASRNEFDAIYHRLDVHILW 271

Query: 355 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           RGES+Y   +  LV  L ++G+ E  +G K++  E   + P+ I KSDGG+ Y T+D+A 
Sbjct: 272 RGESWYNPRLTPLVEELIERGIAEESEGAKVITVEGLKT-PLMIRKSDGGYGYGTTDMAT 330

Query: 415 IRQRIEEEKADWIVYVTD 432
           + QRI +EKA+W++YVTD
Sbjct: 331 LAQRIHDEKAEWLIYVTD 348



 Score =  302 bits (773), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 167/378 (44%), Positives = 236/378 (62%), Gaps = 37/378 (9%)

Query: 1079 ISSSISSQTKG--AAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEK 1136
            ++S+  +QT G   +    VP     SVR  L+ VF+ A++ AFP + D   +VA+TN +
Sbjct: 1    MASAAPAQTLGQFTSTAKRVP-----SVRTDLAGVFSTALRTAFPNV-DIQPAVAATNNR 54

Query: 1137 YVHKFGDFQCNDAMALCKIFKDK-GEKKNPFDIAQSIASVV--TSELATNPSLAKVIDKI 1193
                 GD+QCN+AMAL    K K G  KNP ++A +I + +  T+ +   P+LA      
Sbjct: 55   ---DHGDYQCNNAMALFGRMKGKEGAPKNPREVATAILNALPDTTAIDGTPTLAG----- 106

Query: 1194 EVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
                PGF+N+ LS  +  E+I+ ++           K R +VDFSSPN+AKEMHVGHLRS
Sbjct: 107  ----PGFINIKLSSAWLSERIQILV-----------KQRAVVDFSSPNVAKEMHVGHLRS 151

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL--TKSPPIADLQAF 1311
            TIIGDTI+R LE+ G D +R+NHVGDWGTQFGMLI H+ +  P  L  T +  ++DLQ  
Sbjct: 152  TIIGDTIARTLEFCGVDTLRINHVGDWGTQFGMLIQHIAETRPGGLQGTTTEEVSDLQTL 211

Query: 1312 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 1371
            YK SK RFD +E FK RA + V  LQ  DP++ + W+ IC+ SR +F  IY RL+V +  
Sbjct: 212  YKASKARFDAEEDFKARAREAVTRLQSGDPEFLETWKRICEASRNEFDAIYHRLDVHILW 271

Query: 1372 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            RGES+Y   +  LV  L ++G+ E  +G K++  E   + P+ I KSDGG+ Y T+D+A 
Sbjct: 272  RGESWYNPRLTPLVEELIERGIAEESEGAKVITVEGLKT-PLMIRKSDGGYGYGTTDMAT 330

Query: 1432 IRQRIEEEKADWIVYVTD 1449
            + QRI +EKA+W++YVTD
Sbjct: 331  LAQRIHDEKAEWLIYVTD 348


>gi|425441303|ref|ZP_18821581.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
 gi|389718017|emb|CCH97970.1| Arginyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
          Length = 585

 Score =  484 bits (1246), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/574 (45%), Positives = 375/574 (65%), Gaps = 36/574 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVATT--------LLKNLEIDDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQTPEIAGPGFINLTLKPGYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAAI  R+ ++KA  I+YVTD GQ  HF  + + AKKAG L P+   +  V F
Sbjct: 315  YNYATTDLAAICYRVRQDKAARIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
            G+VLGED KK KTRSG+TVKL ELLD+ +  SL  L+ +  +   E T   +++  + V 
Sbjct: 374  GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIAKTAETVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NR+ +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R  GIN +DL   +
Sbjct: 434  LSAVKYADLSQNRHSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
             ++P+ L+ E E  LAK LL++ +V+  V  DL  + LC+YLY++S  ++ FY+NC  + 
Sbjct: 491  ANSPLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            K AE     + T RL+L + TA+ +K    +L I
Sbjct: 550  KAAE----PIKTSRLVLCDLTARTLKLGLYLLGI 579



 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/340 (46%), Positives = 222/340 (65%), Gaps = 28/340 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32  VAASNPR----FGDYQCNISLSLAKELKQK-----PREVATT--------LLKNLEIDDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75  CQTPEIAGPGFINLTLKPGYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
           GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
           + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           + Y T+DLAAI  R+ ++KA  I+YVTD      + QV Q
Sbjct: 315 YNYATTDLAAICYRVRQDKAARIIYVTDAGQANHFAQVFQ 354



 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/340 (46%), Positives = 222/340 (65%), Gaps = 28/340 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N +    FGD+QCN +++L K  K K     P ++A +        L  N  +  +
Sbjct: 32   VAASNPR----FGDYQCNISLSLAKELKQK-----PREVATT--------LLKNLEIDDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                E+A PGF+N+ L   Y   Q+KD+I  N +     N   +++VDFSSPNIAKEMHV
Sbjct: 75   CQTPEIAGPGFINLTLKPGYLETQLKDLITDNRLGVAAANPSQKIIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
            GHLRSTIIGD I+R+LE+  H V+RLNHVGDWGTQFGMLI +LQ+ +P  LT++    + 
Sbjct: 135  GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FYK++K RFDEDE FK+ A Q VV LQ  DP  ++AW+++C  SRR+FQKIYD L+
Sbjct: 195  DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
            + LTERGESFY  ++E ++  L+++GLL  D+G   ++      ++   +P+ + KSDGG
Sbjct: 255  IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGDPLPLIVKKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            + Y T+DLAAI  R+ ++KA  I+YVTD      + QV Q
Sbjct: 315  YNYATTDLAAICYRVRQDKAARIIYVTDAGQANHFAQVFQ 354


>gi|401400287|ref|XP_003880756.1| arginyl-tRNAsynthetase, related [Neospora caninum Liverpool]
 gi|325115167|emb|CBZ50723.1| arginyl-tRNAsynthetase, related [Neospora caninum Liverpool]
          Length = 594

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/608 (43%), Positives = 373/608 (61%), Gaps = 49/608 (8%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKI-FKDKGEKKNPF 539
            + + F  A+  AFP + D    +A      + KFGDFQCN AMAL K   KD+   ++P 
Sbjct: 8    VKEAFRRALLAAFPSV-DHAPIIA------ISKFGDFQCNSAMALFKQKSKDELGVQSPK 60

Query: 540  DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV--NGVQP 597
            +  + IA  +  E         +   ++ +  GFV V ++  +  + +K ++     +Q 
Sbjct: 61   EAGEKIAEHLKGE--------PLFSNVQASPQGFVTVDVAGDWLSQDLKQVLRQKGPLQL 112

Query: 598  PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
            P  +KKLRV+VDFSSPN+AKEMHVGHLRSTIIG++I R+L + GH+V R+NH+GDWGTQF
Sbjct: 113  PHADKKLRVMVDFSSPNVAKEMHVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQF 172

Query: 658  GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            GMLI +L  +FPDY    P I+DL AFYK++K  FD D+ FK R+ + VV LQ  D    
Sbjct: 173  GMLIEYLHSQFPDYKANMPDISDLNAFYKKAKASFDADDGFKARSREMVVKLQGGDEAAL 232

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 777
            ++W +ICDVSR +F+K+Y RL+VTL ERGES+Y   + ++V  L  KG++ + DG K ++
Sbjct: 233  ESWRLICDVSRHEFEKVYKRLDVTLEERGESYYNPAIPKVVQELTDKGMITVSDGAKCVF 292

Query: 778  GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAK 837
                  +P+  VKSDGGF YD++DLAAIR R+ E + DW++YVTDLGQ  HF  +   A+
Sbjct: 293  TR-VSEVPLMAVKSDGGFGYDSTDLAAIRDRLVERQGDWLIYVTDLGQEEHFAKIFAAAE 351

Query: 838  KAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK---- 893
            +AG   P +TR+D +GFGVV G+D K+FKTRSG+ VKL +LLDE   R+L +L+ +    
Sbjct: 352  QAGWHTPPETRVDHMGFGVVQGQDGKRFKTRSGEVVKLVDLLDEAKMRALKELQRRKEEE 411

Query: 894  ---------------NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
                              T +   E+ +A +A+ Y  +KY DL  NR+ DY FS+D+MLD
Sbjct: 412  KEEEEKRESGDGCSCGTGTAVADEEMDKAAEAIGYSAVKYFDLKQNRHTDYKFSYDRMLD 471

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
             +GNTAVY++YAY RI +I R AG++   L        + +E   E  LA TL +  DVL
Sbjct: 472  PKGNTAVYMMYAYARICAIFRKAGVDISTL----DPEELKIEEPAERKLAVTLAQFPDVL 527

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
              +  DL +H L EY+Y +S AF++FY  C    K   G+ +     RLLL EAT K+++
Sbjct: 528  ATIVEDLHIHRLAEYMYKVSGAFTDFYQAC----KVLGGRQQNT---RLLLCEATRKILQ 580

Query: 1059 KCFDILNI 1066
              F +L I
Sbjct: 581  ASFYLLGI 588



 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 157/345 (45%), Positives = 223/345 (64%), Gaps = 19/345 (5%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKI-FKDKGEKKNPF 149
           + + F  A+  AFP + D    +A      + KFGDFQCN AMAL K   KD+   ++P 
Sbjct: 8   VKEAFRRALLAAFPSV-DHAPIIA------ISKFGDFQCNSAMALFKQKSKDELGVQSPK 60

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV--NGVQP 207
           +  + IA  +  E         +   ++ +  GFV V ++  +  + +K ++     +Q 
Sbjct: 61  EAGEKIAEHLKGE--------PLFSNVQASPQGFVTVDVAGDWLSQDLKQVLRQKGPLQL 112

Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
           P  +KKLRV+VDFSSPN+AKEMHVGHLRSTIIG++I R+L + GH+V R+NH+GDWGTQF
Sbjct: 113 PHADKKLRVMVDFSSPNVAKEMHVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQF 172

Query: 268 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           GMLI +L  +FPDY    P I+DL AFYK++K  FD D+ FK R+ + VV LQ  D    
Sbjct: 173 GMLIEYLHSQFPDYKANMPDISDLNAFYKKAKASFDADDGFKARSREMVVKLQGGDEAAL 232

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 387
           ++W +ICDVSR +F+K+Y RL+VTL ERGES+Y   + ++V  L  KG++ + DG K ++
Sbjct: 233 ESWRLICDVSRHEFEKVYKRLDVTLEERGESYYNPAIPKVVQELTDKGMITVSDGAKCVF 292

Query: 388 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
                 +P+  VKSDGGF YD++DLAAIR R+ E + DW++YVTD
Sbjct: 293 TR-VSEVPLMAVKSDGGFGYDSTDLAAIRDRLVERQGDWLIYVTD 336



 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 157/345 (45%), Positives = 223/345 (64%), Gaps = 19/345 (5%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKI-FKDKGEKKNPF 1166
            + + F  A+  AFP + D    +A      + KFGDFQCN AMAL K   KD+   ++P 
Sbjct: 8    VKEAFRRALLAAFPSV-DHAPIIA------ISKFGDFQCNSAMALFKQKSKDELGVQSPK 60

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV--NGVQP 1224
            +  + IA  +  E         +   ++ +  GFV V ++  +  + +K ++     +Q 
Sbjct: 61   EAGEKIAEHLKGE--------PLFSNVQASPQGFVTVDVAGDWLSQDLKQVLRQKGPLQL 112

Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
            P  +KKLRV+VDFSSPN+AKEMHVGHLRSTIIG++I R+L + GH+V R+NH+GDWGTQF
Sbjct: 113  PHADKKLRVMVDFSSPNVAKEMHVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQF 172

Query: 1285 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            GMLI +L  +FPDY    P I+DL AFYK++K  FD D+ FK R+ + VV LQ  D    
Sbjct: 173  GMLIEYLHSQFPDYKANMPDISDLNAFYKKAKASFDADDGFKARSREMVVKLQGGDEAAL 232

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 1404
            ++W +ICDVSR +F+K+Y RL+VTL ERGES+Y   + ++V  L  KG++ + DG K ++
Sbjct: 233  ESWRLICDVSRHEFEKVYKRLDVTLEERGESYYNPAIPKVVQELTDKGMITVSDGAKCVF 292

Query: 1405 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
                  +P+  VKSDGGF YD++DLAAIR R+ E + DW++YVTD
Sbjct: 293  TR-VSEVPLMAVKSDGGFGYDSTDLAAIRDRLVERQGDWLIYVTD 336


>gi|340369649|ref|XP_003383360.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Amphimedon
           queenslandica]
          Length = 435

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/420 (56%), Positives = 299/420 (71%), Gaps = 12/420 (2%)

Query: 476 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
           +VR  ++ +F  A+   +P      A + ++  +   +FGD++C  AM L    K  GE 
Sbjct: 3   NVRSVITAIFRTALCKCYPSFNTTRAIIQASGAE---RFGDYKCVAAMPLANTLKQSGEV 59

Query: 536 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
            +P D+AQ I       L   PS   VI+K EVA PGF+NV++ R Y  E + DI+V GV
Sbjct: 60  LSPRDVAQKI-------LNNLPSTPFVIEKCEVAGPGFINVYVKRSYISELVSDILVKGV 112

Query: 596 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
           +PP + +KLRV+VDFSSPN+AKEMHVGHLRSTIIG+TI RLLE+ GHDV+RLNHVGDWGT
Sbjct: 113 RPPPVERKLRVIVDFSSPNVAKEMHVGHLRSTIIGETICRLLEFFGHDVLRLNHVGDWGT 172

Query: 656 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
           QFGMLIAHLQD+FPDY T SPPI DLQ FY+ESKKRFD DE FKKRAY CVV LQ  DP+
Sbjct: 173 QFGMLIAHLQDQFPDYSTVSPPIGDLQKFYRESKKRFDNDENFKKRAYNCVVKLQGNDPE 232

Query: 716 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
             +AW++ICDVSR++F  IYDRL V   ERGESFY+  M  +V  L  KGL  ++DG  +
Sbjct: 233 VHQAWKLICDVSRKEFLLIYDRLGVKNQERGESFYEPMMPGIVKDLRGKGLAVIEDGATV 292

Query: 776 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
           M    +  +P+ + KSDG  TYDTSD+AA+R RIEEEK DW++YV D GQG+HF  + E 
Sbjct: 293 MHIPGK-LVPLMLAKSDGAHTYDTSDMAALRHRIEEEKGDWLIYVVDAGQGLHFETVFEG 351

Query: 836 AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
              AG +  +  R+D VGFGVVLGED+KK KTRSGDTV+L +LLDEGL RSL++LK+K R
Sbjct: 352 GCMAGYV-ADGVRIDHVGFGVVLGEDKKKLKTRSGDTVRLKDLLDEGLERSLERLKEKGR 410



 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/347 (55%), Positives = 244/347 (70%), Gaps = 11/347 (3%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           +VR  ++ +F  A+   +P      A + ++  +   +FGD++C  AM L    K  GE 
Sbjct: 3   NVRSVITAIFRTALCKCYPSFNTTRAIIQASGAE---RFGDYKCVAAMPLANTLKQSGEV 59

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
            +P D+AQ I       L   PS   VI+K EVA PGF+NV++ R Y  E + DI+V GV
Sbjct: 60  LSPRDVAQKI-------LNNLPSTPFVIEKCEVAGPGFINVYVKRSYISELVSDILVKGV 112

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
           +PP + +KLRV+VDFSSPN+AKEMHVGHLRSTIIG+TI RLLE+ GHDV+RLNHVGDWGT
Sbjct: 113 RPPPVERKLRVIVDFSSPNVAKEMHVGHLRSTIIGETICRLLEFFGHDVLRLNHVGDWGT 172

Query: 266 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 325
           QFGMLIAHLQD+FPDY T SPPI DLQ FY+ESKKRFD DE FKKRAY CVV LQ  DP+
Sbjct: 173 QFGMLIAHLQDQFPDYSTVSPPIGDLQKFYRESKKRFDNDENFKKRAYNCVVKLQGNDPE 232

Query: 326 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
             +AW++ICDVSR++F  IYDRL V   ERGESFY+  M  +V  L  KGL  ++DG  +
Sbjct: 233 VHQAWKLICDVSRKEFLLIYDRLGVKNQERGESFYEPMMPGIVKDLRGKGLAVIEDGATV 292

Query: 386 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           M    +  +P+ + KSDG  TYDTSD+AA+R RIEEEK DW++YV D
Sbjct: 293 MHIPGK-LVPLMLAKSDGAHTYDTSDMAALRHRIEEEKGDWLIYVVD 338



 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/347 (55%), Positives = 244/347 (70%), Gaps = 11/347 (3%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            +VR  ++ +F  A+   +P      A + ++  +   +FGD++C  AM L    K  GE 
Sbjct: 3    NVRSVITAIFRTALCKCYPSFNTTRAIIQASGAE---RFGDYKCVAAMPLANTLKQSGEV 59

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
             +P D+AQ I       L   PS   VI+K EVA PGF+NV++ R Y  E + DI+V GV
Sbjct: 60   LSPRDVAQKI-------LNNLPSTPFVIEKCEVAGPGFINVYVKRSYISELVSDILVKGV 112

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            +PP + +KLRV+VDFSSPN+AKEMHVGHLRSTIIG+TI RLLE+ GHDV+RLNHVGDWGT
Sbjct: 113  RPPPVERKLRVIVDFSSPNVAKEMHVGHLRSTIIGETICRLLEFFGHDVLRLNHVGDWGT 172

Query: 1283 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
            QFGMLIAHLQD+FPDY T SPPI DLQ FY+ESKKRFD DE FKKRAY CVV LQ  DP+
Sbjct: 173  QFGMLIAHLQDQFPDYSTVSPPIGDLQKFYRESKKRFDNDENFKKRAYNCVVKLQGNDPE 232

Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
              +AW++ICDVSR++F  IYDRL V   ERGESFY+  M  +V  L  KGL  ++DG  +
Sbjct: 233  VHQAWKLICDVSRKEFLLIYDRLGVKNQERGESFYEPMMPGIVKDLRGKGLAVIEDGATV 292

Query: 1403 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            M    +  +P+ + KSDG  TYDTSD+AA+R RIEEEK DW++YV D
Sbjct: 293  MHIPGK-LVPLMLAKSDGAHTYDTSDMAALRHRIEEEKGDWLIYVVD 338


>gi|428223671|ref|YP_007107768.1| arginyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
 gi|427983572|gb|AFY64716.1| arginyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
          Length = 585

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 271/604 (44%), Positives = 372/604 (61%), Gaps = 40/604 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPE-LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            S  D L   F+ A+  AF E  G+    +   +     KFGDFQ N A+AL K  K    
Sbjct: 3    STLDQLKARFSQALVKAFGEQYGEADPMLVPASNP---KFGDFQSNAALALTKQLK---- 55

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
             + P  IAQ I          N  +    +  E+A PGF+N+ L + Y   ++  ++ + 
Sbjct: 56   -QAPQAIAQQIIQ--------NLEIDDYCETPEIAGPGFINLRLKQEYLVSRLHRMLASD 106

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV+P  + +  RV+VDFSSPNIAKEMHVGHLR+TIIGD I+R+LE+ GHDV+RLNHVG
Sbjct: 107  RLGVEP--VKRPQRVIVDFSSPNIAKEMHVGHLRTTIIGDAIARVLEFQGHDVLRLNHVG 164

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            DWGTQFGMLI HL++  P  L  S  I   DL AFY+E+K+RFDEDE FK+R+ + VV L
Sbjct: 165  DWGTQFGMLITHLREACPAALQDSDAIDLGDLVAFYREAKQRFDEDEDFKERSRKAVVEL 224

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  DP+ +KAW+++CD SRR+FQKIYDRL++TLTERGESFY   +  +V  L   GLL  
Sbjct: 225  QSGDPEARKAWQILCDQSRREFQKIYDRLDITLTERGESFYNPLLADVVKDLATTGLLVE 284

Query: 770  DDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLG 824
            D G + ++      +D   +P+ I KSDGG+ Y T+DLAAIR RI+++ A+ I+YV D G
Sbjct: 285  DQGAQCVFLDGFTNKDGDPLPLIIQKSDGGYNYATTDLAAIRYRIQQDGAERIIYVVDAG 344

Query: 825  QGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
            Q  HF  + + A++AG + P       V FGVV GED KKFKTRSG+TV+L +LLDE + 
Sbjct: 345  QSNHFAQVFQVARRAGWV-PETVEPIHVPFGVVRGEDGKKFKTRSGETVRLKDLLDEAVT 403

Query: 885  RSLDKLKDKNRHT--ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            R+   L  + +    + +P  +    + V    +KYADLS NR  DYVFS+DKML  +GN
Sbjct: 404  RARTDLSTRVQEEGRDESPEFIGHVAETVGISAVKYADLSQNRTSDYVFSYDKMLALQGN 463

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA Y+LYAY RI  I+R   I   D    A   P+ L+ E E  LAK LL+++ +L  V+
Sbjct: 464  TAPYMLYAYVRIQGISRKGQI---DFTQIANDVPIDLQDESELTLAKHLLQLDQILAAVS 520

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
             +L  + LC+YL+++S  F++FYD C  ++ D   +     T RL L + TA+ +K    
Sbjct: 521  VELLPNRLCQYLFELSQKFNQFYDRCPVLQADEPQR-----TSRLALCDLTARTLKLGLS 575

Query: 1063 ILNI 1066
            +L I
Sbjct: 576  LLGI 579



 Score =  306 bits (785), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 174/370 (47%), Positives = 233/370 (62%), Gaps = 32/370 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPE-LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           S  D L   F+ A+  AF E  G+    +   +     KFGDFQ N A+AL K  K    
Sbjct: 3   STLDQLKARFSQALVKAFGEQYGEADPMLVPASNP---KFGDFQSNAALALTKQLK---- 55

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
            + P  IAQ I          N  +    +  E+A PGF+N+ L + Y   ++  ++ + 
Sbjct: 56  -QAPQAIAQQIIQ--------NLEIDDYCETPEIAGPGFINLRLKQEYLVSRLHRMLASD 106

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GV+P  + +  RV+VDFSSPNIAKEMHVGHLR+TIIGD I+R+LE+ GHDV+RLNHVG
Sbjct: 107 RLGVEP--VKRPQRVIVDFSSPNIAKEMHVGHLRTTIIGDAIARVLEFQGHDVLRLNHVG 164

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           DWGTQFGMLI HL++  P  L  S  I   DL AFY+E+K+RFDEDE FK+R+ + VV L
Sbjct: 165 DWGTQFGMLITHLREACPAALQDSDAIDLGDLVAFYREAKQRFDEDEDFKERSRKAVVEL 224

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 379
           Q  DP+ +KAW+++CD SRR+FQKIYDRL++TLTERGESFY   +  +V  L   GLL  
Sbjct: 225 QSGDPEARKAWQILCDQSRREFQKIYDRLDITLTERGESFYNPLLADVVKDLATTGLLVE 284

Query: 380 DDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-- 432
           D G + ++      +D   +P+ I KSDGG+ Y T+DLAAIR RI+++ A+ I+YV D  
Sbjct: 285 DQGAQCVFLDGFTNKDGDPLPLIIQKSDGGYNYATTDLAAIRYRIQQDGAERIIYVVDAG 344

Query: 433 -HRSYHQVLQ 441
               + QV Q
Sbjct: 345 QSNHFAQVFQ 354



 Score =  306 bits (785), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 174/370 (47%), Positives = 233/370 (62%), Gaps = 32/370 (8%)

Query: 1103 SVRDYLSDVFTHAVQVAFPE-LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            S  D L   F+ A+  AF E  G+    +   +     KFGDFQ N A+AL K  K    
Sbjct: 3    STLDQLKARFSQALVKAFGEQYGEADPMLVPASNP---KFGDFQSNAALALTKQLK---- 55

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
             + P  IAQ I          N  +    +  E+A PGF+N+ L + Y   ++  ++ + 
Sbjct: 56   -QAPQAIAQQIIQ--------NLEIDDYCETPEIAGPGFINLRLKQEYLVSRLHRMLASD 106

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV+P  + +  RV+VDFSSPNIAKEMHVGHLR+TIIGD I+R+LE+ GHDV+RLNHVG
Sbjct: 107  RLGVEP--VKRPQRVIVDFSSPNIAKEMHVGHLRTTIIGDAIARVLEFQGHDVLRLNHVG 164

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            DWGTQFGMLI HL++  P  L  S  I   DL AFY+E+K+RFDEDE FK+R+ + VV L
Sbjct: 165  DWGTQFGMLITHLREACPAALQDSDAIDLGDLVAFYREAKQRFDEDEDFKERSRKAVVEL 224

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  DP+ +KAW+++CD SRR+FQKIYDRL++TLTERGESFY   +  +V  L   GLL  
Sbjct: 225  QSGDPEARKAWQILCDQSRREFQKIYDRLDITLTERGESFYNPLLADVVKDLATTGLLVE 284

Query: 1397 DDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-- 1449
            D G + ++      +D   +P+ I KSDGG+ Y T+DLAAIR RI+++ A+ I+YV D  
Sbjct: 285  DQGAQCVFLDGFTNKDGDPLPLIIQKSDGGYNYATTDLAAIRYRIQQDGAERIIYVVDAG 344

Query: 1450 -HRSYHQVLQ 1458
                + QV Q
Sbjct: 345  QSNHFAQVFQ 354


>gi|300122665|emb|CBK23232.2| unnamed protein product [Blastocystis hominis]
          Length = 601

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 259/601 (43%), Positives = 372/601 (61%), Gaps = 29/601 (4%)

Query: 476  SVRDYLSDVFTHAVQVAFPEL---GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            S+   ++ +FT A++ +FP+L    +      +TN K  H   D+QCN AM L K  +  
Sbjct: 9    SLISIVTGLFTKAIRDSFPDLEISSNDCLISQNTNAKMKH---DYQCNSAMGLTKKLQAL 65

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
              K+N     +    ++   L      ++ ++K E+A PGF+N++L + +  + I  I+ 
Sbjct: 66   RGKENAPKNPRECGQIIIDHLPE----SEFVEKTELAGPGFINLYLKKSWVAQHILSILN 121

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            +G  PP   +K RV++D+SSPNIAK+MHVGHLRSTIIGD+++R+LE+ GH+V+R+NHVGD
Sbjct: 122  HGFVPPPTERK-RVIIDYSSPNIAKDMHVGHLRSTIIGDSLARILEFCGHEVIRINHVGD 180

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGTQFGMLIAHLQD  PD+ T  P I DL  FYK +K +FDED+ F++RA+Q VV LQ  
Sbjct: 181  WGTQFGMLIAHLQDIAPDFETNPPSIEDLTVFYKAAKCKFDEDKAFQERAHQEVVNLQSG 240

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNV--TLTERGESFYQKHMEQLVPYLEKKGLLELD 770
             P     W+ +C VS + F K+Y  LNV   L   GESFY   +  +V  L+ KGLL+  
Sbjct: 241  VPKNLAMWKTLCSVSEKMFSKVYKMLNVDPRLKMMGESFYNPLLPAMVKELDAKGLLQDS 300

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            DG K+++ +    +P+ I KSDGGF YD++D+ AI+ RI+E KADWI+YV D GQ +HF+
Sbjct: 301  DGAKVLFPQGF-EVPLIIQKSDGGFGYDSTDMTAIKYRIQEMKADWIIYVVDSGQALHFQ 359

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
             + + A+ AG +     R+D VGFGVV GED+KKFKTR+G +V+L +LL+E   ++   +
Sbjct: 360  QVFQAARDAGWV--GSVRLDHVGFGVVQGEDKKKFKTRAGKSVRLVDLLNEAAEKATAIM 417

Query: 891  KDK---NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
            K +          P E+ EA   + YG +KY DL  NR  DYVFSF++ML   G+T VYL
Sbjct: 418  KKRVEDGVSGVSDPKEIEEAAAQLGYGGVKYFDLRQNRLSDYVFSFERMLSPEGDTNVYL 477

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
             Y++ R  SI R A    E+L+   + T ++LEH  E+ LA  +LR +DVL  V  DL  
Sbjct: 478  QYSHARCMSIIRKAPEEVEELK---KHTQITLEHPSEWDLACYILRFSDVLEQVPMDLMP 534

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            + +C+Y+YD+S   + FY +C  I    +         RLLL  A  KVM++ FD+L I 
Sbjct: 535  NRICKYIYDLSIKLNGFYRDCRVIGSPEQ-------NSRLLLVAAAEKVMRQGFDLLGIV 587

Query: 1068 T 1068
            T
Sbjct: 588  T 588



 Score =  311 bits (797), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 162/365 (44%), Positives = 232/365 (63%), Gaps = 17/365 (4%)

Query: 86  SVRDYLSDVFTHAVQVAFPEL---GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           S+   ++ +FT A++ +FP+L    +      +TN K  H   D+QCN AM L K  +  
Sbjct: 9   SLISIVTGLFTKAIRDSFPDLEISSNDCLISQNTNAKMKH---DYQCNSAMGLTKKLQAL 65

Query: 143 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
             K+N     +    ++   L      ++ ++K E+A PGF+N++L + +  + I  I+ 
Sbjct: 66  RGKENAPKNPRECGQIIIDHLPE----SEFVEKTELAGPGFINLYLKKSWVAQHILSILN 121

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           +G  PP   +K RV++D+SSPNIAK+MHVGHLRSTIIGD+++R+LE+ GH+V+R+NHVGD
Sbjct: 122 HGFVPPPTERK-RVIIDYSSPNIAKDMHVGHLRSTIIGDSLARILEFCGHEVIRINHVGD 180

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGTQFGMLIAHLQD  PD+ T  P I DL  FYK +K +FDED+ F++RA+Q VV LQ  
Sbjct: 181 WGTQFGMLIAHLQDIAPDFETNPPSIEDLTVFYKAAKCKFDEDKAFQERAHQEVVNLQSG 240

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNV--TLTERGESFYQKHMEQLVPYLEKKGLLELD 380
            P     W+ +C VS + F K+Y  LNV   L   GESFY   +  +V  L+ KGLL+  
Sbjct: 241 VPKNLAMWKTLCSVSEKMFSKVYKMLNVDPRLKMMGESFYNPLLPAMVKELDAKGLLQDS 300

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRS---YH 437
           DG K+++ +    +P+ I KSDGGF YD++D+ AI+ RI+E KADWI+YV D      + 
Sbjct: 301 DGAKVLFPQGF-EVPLIIQKSDGGFGYDSTDMTAIKYRIQEMKADWIIYVVDSGQALHFQ 359

Query: 438 QVLQA 442
           QV QA
Sbjct: 360 QVFQA 364



 Score =  309 bits (792), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 161/364 (44%), Positives = 231/364 (63%), Gaps = 17/364 (4%)

Query: 1103 SVRDYLSDVFTHAVQVAFPEL---GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            S+   ++ +FT A++ +FP+L    +      +TN K  H   D+QCN AM L K  +  
Sbjct: 9    SLISIVTGLFTKAIRDSFPDLEISSNDCLISQNTNAKMKH---DYQCNSAMGLTKKLQAL 65

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
              K+N     +    ++   L      ++ ++K E+A PGF+N++L + +  + I  I+ 
Sbjct: 66   RGKENAPKNPRECGQIIIDHLPE----SEFVEKTELAGPGFINLYLKKSWVAQHILSILN 121

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            +G  PP   +K RV++D+SSPNIAK+MHVGHLRSTIIGD+++R+LE+ GH+V+R+NHVGD
Sbjct: 122  HGFVPPPTERK-RVIIDYSSPNIAKDMHVGHLRSTIIGDSLARILEFCGHEVIRINHVGD 180

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGTQFGMLIAHLQD  PD+ T  P I DL  FYK +K +FDED+ F++RA+Q VV LQ  
Sbjct: 181  WGTQFGMLIAHLQDIAPDFETNPPSIEDLTVFYKAAKCKFDEDKAFQERAHQEVVNLQSG 240

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNV--TLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
             P     W+ +C VS + F K+Y  LNV   L   GESFY   +  +V  L+ KGLL+  
Sbjct: 241  VPKNLAMWKTLCSVSEKMFSKVYKMLNVDPRLKMMGESFYNPLLPAMVKELDAKGLLQDS 300

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRS---YH 1454
            DG K+++ +    +P+ I KSDGGF YD++D+ AI+ RI+E KADWI+YV D      + 
Sbjct: 301  DGAKVLFPQGF-EVPLIIQKSDGGFGYDSTDMTAIKYRIQEMKADWIIYVVDSGQALHFQ 359

Query: 1455 QVLQ 1458
            QV Q
Sbjct: 360  QVFQ 363


>gi|221504188|gb|EEE29863.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 607

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/587 (44%), Positives = 367/587 (62%), Gaps = 47/587 (8%)

Query: 511  VHKFGDFQCNDAMALCKIFKDKGEK----KNPFDIAQSIASVVTSE-----LATNPSLAK 561
            V KFGDFQCN AMAL   FK K ++    ++P +  + IA+ +  E     +  +P  A 
Sbjct: 31   VSKFGDFQCNSAMAL---FKQKSKEELGVQSPKEAGEKIAAQLKDESLFSNVQASPQ-AS 86

Query: 562  VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV--NGVQPPTLNKKLRVLVDFSSPNIAKEM 619
            ++++ E    GFV V +S  +  + +K+I+     +Q P   KKLRV+VDFSSPN+AKEM
Sbjct: 87   LLNRDEPVLAGFVTVDISGAWLCKDLKEILKQKGHLQVPQAEKKLRVMVDFSSPNVAKEM 146

Query: 620  HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 679
            HVGHLRSTIIG++I R+L + GH+V R+NH+GDWGTQFGMLI +L  +FPDY    P I+
Sbjct: 147  HVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDIS 206

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL AFYK++K  FD DE FK R+ + VV LQ  D    ++W +ICDVSR++F+K+Y RL+
Sbjct: 207  DLNAFYKKAKAAFDADEDFKTRSREMVVKLQGGDEAALESWRLICDVSRKEFEKVYKRLD 266

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 799
            V+L ERGES+Y   + ++V  L  KG++ + DG K ++ +    +P+  VKSDGGF YD+
Sbjct: 267  VSLEERGESYYNAVLPKVVQELTDKGMVTVSDGAKCVFTK-VSEVPLMAVKSDGGFGYDS 325

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLAA+R R+ E + DW++YVTDLGQ  HF  +   A++AG   P KTR+D +GFGVV G
Sbjct: 326  TDLAAVRDRLVERRGDWLIYVTDLGQEEHFTKIFAAAEQAGWHLPPKTRLDHMGFGVVQG 385

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK---------------DKNRHTELTPT-- 902
            +D K+FKTRSG+ VKL +LLDE   R+L +L+               D    +  T T  
Sbjct: 386  QDGKRFKTRSGEVVKLVDLLDEAKARALKELRRRKEEEKEEEKRESGDGCNASPCTGTTV 445

Query: 903  ---ELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR 959
               E+  A +A+ Y  +KY DL  NR+ DY FS+D+MLD +GNTAVY++YAY RI +I R
Sbjct: 446  ADEEMDNAAEAIGYSAVKYFDLKQNRHTDYKFSYDRMLDPKGNTAVYMMYAYARICAIFR 505

Query: 960  TAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIST 1019
             A ++   L        + +E   E  LA TL +  DVL  +  DL +H L EY+Y +S 
Sbjct: 506  KADVDISTL----DPEELKIEEPAERKLAVTLAQFPDVLATILDDLHIHRLAEYMYKVSG 561

Query: 1020 AFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            AF++FY  C  +    +         RLLL EAT KV++  F +L I
Sbjct: 562  AFTDFYQACKVLGSPQQNT-------RLLLCEATRKVLQASFYLLGI 601



 Score =  305 bits (782), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 155/323 (47%), Positives = 220/323 (68%), Gaps = 16/323 (4%)

Query: 121 VHKFGDFQCNDAMALCKIFKDKGEK----KNPFDIAQSIASVVTSE-----LATNPSLAK 171
           V KFGDFQCN AMAL   FK K ++    ++P +  + IA+ +  E     +  +P  A 
Sbjct: 31  VSKFGDFQCNSAMAL---FKQKSKEELGVQSPKEAGEKIAAQLKDESLFSNVQASPQ-AS 86

Query: 172 VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV--NGVQPPTLNKKLRVLVDFSSPNIAKEM 229
           ++++ E    GFV V +S  +  + +K+I+     +Q P   KKLRV+VDFSSPN+AKEM
Sbjct: 87  LLNRDEPVLAGFVTVDISGAWLCKDLKEILKQKGHLQVPQAEKKLRVMVDFSSPNVAKEM 146

Query: 230 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 289
           HVGHLRSTIIG++I R+L + GH+V R+NH+GDWGTQFGMLI +L  +FPDY    P I+
Sbjct: 147 HVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDIS 206

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL AFYK++K  FD DE FK R+ + VV LQ  D    ++W +ICDVSR++F+K+Y RL+
Sbjct: 207 DLNAFYKKAKAAFDADEDFKTRSREMVVKLQGGDEAALESWRLICDVSRKEFEKVYKRLD 266

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 409
           V+L ERGES+Y   + ++V  L  KG++ + DG K ++ +    +P+  VKSDGGF YD+
Sbjct: 267 VSLEERGESYYNAVLPKVVQELTDKGMVTVSDGAKCVFTK-VSEVPLMAVKSDGGFGYDS 325

Query: 410 SDLAAIRQRIEEEKADWIVYVTD 432
           +DLAA+R R+ E + DW++YVTD
Sbjct: 326 TDLAAVRDRLVERRGDWLIYVTD 348



 Score =  305 bits (782), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 155/323 (47%), Positives = 220/323 (68%), Gaps = 16/323 (4%)

Query: 1138 VHKFGDFQCNDAMALCKIFKDKGEK----KNPFDIAQSIASVVTSE-----LATNPSLAK 1188
            V KFGDFQCN AMAL   FK K ++    ++P +  + IA+ +  E     +  +P  A 
Sbjct: 31   VSKFGDFQCNSAMAL---FKQKSKEELGVQSPKEAGEKIAAQLKDESLFSNVQASPQ-AS 86

Query: 1189 VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV--NGVQPPTLNKKLRVLVDFSSPNIAKEM 1246
            ++++ E    GFV V +S  +  + +K+I+     +Q P   KKLRV+VDFSSPN+AKEM
Sbjct: 87   LLNRDEPVLAGFVTVDISGAWLCKDLKEILKQKGHLQVPQAEKKLRVMVDFSSPNVAKEM 146

Query: 1247 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 1306
            HVGHLRSTIIG++I R+L + GH+V R+NH+GDWGTQFGMLI +L  +FPDY    P I+
Sbjct: 147  HVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDIS 206

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL AFYK++K  FD DE FK R+ + VV LQ  D    ++W +ICDVSR++F+K+Y RL+
Sbjct: 207  DLNAFYKKAKAAFDADEDFKTRSREMVVKLQGGDEAALESWRLICDVSRKEFEKVYKRLD 266

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 1426
            V+L ERGES+Y   + ++V  L  KG++ + DG K ++ +    +P+  VKSDGGF YD+
Sbjct: 267  VSLEERGESYYNAVLPKVVQELTDKGMVTVSDGAKCVFTK-VSEVPLMAVKSDGGFGYDS 325

Query: 1427 SDLAAIRQRIEEEKADWIVYVTD 1449
            +DLAA+R R+ E + DW++YVTD
Sbjct: 326  TDLAAVRDRLVERRGDWLIYVTD 348


>gi|237843883|ref|XP_002371239.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211968903|gb|EEB04099.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221483811|gb|EEE22123.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 607

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/587 (44%), Positives = 367/587 (62%), Gaps = 47/587 (8%)

Query: 511  VHKFGDFQCNDAMALCKIFKDKGEK----KNPFDIAQSIASVVTSE-----LATNPSLAK 561
            V KFGDFQCN AMAL   FK K ++    ++P +  + IA+ +  E     +  +P  A 
Sbjct: 31   VSKFGDFQCNSAMAL---FKQKSKEELGVQSPKEAGEKIAAQLKDESLFSNVQASPQ-AS 86

Query: 562  VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV--NGVQPPTLNKKLRVLVDFSSPNIAKEM 619
            ++++ E    GFV V +S  +  + +K+I+     +Q P   KKLRV+VDFSSPN+AKEM
Sbjct: 87   LLNRDEPVLAGFVTVDISGAWLCKDLKEILKQKGHLQVPHAEKKLRVMVDFSSPNVAKEM 146

Query: 620  HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 679
            HVGHLRSTIIG++I R+L + GH+V R+NH+GDWGTQFGMLI +L  +FPDY    P I+
Sbjct: 147  HVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDIS 206

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL AFYK++K  FD DE FK R+ + VV LQ  D    ++W +ICDVSR++F+K+Y RL+
Sbjct: 207  DLNAFYKKAKAAFDADEDFKTRSREMVVKLQGGDEAALESWRLICDVSRKEFEKVYKRLD 266

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 799
            V+L ERGES+Y   + ++V  L  KG++ + DG K ++ +    +P+  VKSDGGF YD+
Sbjct: 267  VSLEERGESYYNAVLPKVVQELTDKGMVTVSDGAKCVFTK-VSEVPLMAVKSDGGFGYDS 325

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLAA+R R+ E + DW++YVTDLGQ  HF  +   A++AG   P KTR+D +GFGVV G
Sbjct: 326  TDLAAVRDRLVERRGDWLIYVTDLGQEEHFTKIFAAAEQAGWHLPPKTRLDHMGFGVVQG 385

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK---------------DKNRHTELTPT-- 902
            +D K+FKTRSG+ VKL +LLDE   R+L +L+               D    +  T T  
Sbjct: 386  QDGKRFKTRSGEVVKLVDLLDEAKARALKELRRRKEEEKEEEKRESGDGCNASPCTGTTV 445

Query: 903  ---ELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR 959
               E+  A +A+ Y  +KY DL  NR+ DY FS+D+MLD +GNTAVY++YAY RI +I R
Sbjct: 446  ADEEMDNAAEAIGYSAVKYFDLKQNRHTDYKFSYDRMLDPKGNTAVYMMYAYARICAIFR 505

Query: 960  TAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIST 1019
             A ++   L        + +E   E  LA TL +  DVL  +  DL +H L EY+Y +S 
Sbjct: 506  KADVDISTL----DPEELKIEEPAERKLAVTLAQFPDVLATILDDLHIHRLAEYMYKVSG 561

Query: 1020 AFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            AF++FY  C  +    +         RLLL EAT KV++  F +L I
Sbjct: 562  AFTDFYQACKVLGSPQQNT-------RLLLCEATRKVLQASFYLLGI 601



 Score =  305 bits (781), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 155/323 (47%), Positives = 220/323 (68%), Gaps = 16/323 (4%)

Query: 121 VHKFGDFQCNDAMALCKIFKDKGEK----KNPFDIAQSIASVVTSE-----LATNPSLAK 171
           V KFGDFQCN AMAL   FK K ++    ++P +  + IA+ +  E     +  +P  A 
Sbjct: 31  VSKFGDFQCNSAMAL---FKQKSKEELGVQSPKEAGEKIAAQLKDESLFSNVQASPQ-AS 86

Query: 172 VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV--NGVQPPTLNKKLRVLVDFSSPNIAKEM 229
           ++++ E    GFV V +S  +  + +K+I+     +Q P   KKLRV+VDFSSPN+AKEM
Sbjct: 87  LLNRDEPVLAGFVTVDISGAWLCKDLKEILKQKGHLQVPHAEKKLRVMVDFSSPNVAKEM 146

Query: 230 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 289
           HVGHLRSTIIG++I R+L + GH+V R+NH+GDWGTQFGMLI +L  +FPDY    P I+
Sbjct: 147 HVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDIS 206

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL AFYK++K  FD DE FK R+ + VV LQ  D    ++W +ICDVSR++F+K+Y RL+
Sbjct: 207 DLNAFYKKAKAAFDADEDFKTRSREMVVKLQGGDEAALESWRLICDVSRKEFEKVYKRLD 266

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 409
           V+L ERGES+Y   + ++V  L  KG++ + DG K ++ +    +P+  VKSDGGF YD+
Sbjct: 267 VSLEERGESYYNAVLPKVVQELTDKGMVTVSDGAKCVFTK-VSEVPLMAVKSDGGFGYDS 325

Query: 410 SDLAAIRQRIEEEKADWIVYVTD 432
           +DLAA+R R+ E + DW++YVTD
Sbjct: 326 TDLAAVRDRLVERRGDWLIYVTD 348



 Score =  305 bits (781), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 155/323 (47%), Positives = 220/323 (68%), Gaps = 16/323 (4%)

Query: 1138 VHKFGDFQCNDAMALCKIFKDKGEK----KNPFDIAQSIASVVTSE-----LATNPSLAK 1188
            V KFGDFQCN AMAL   FK K ++    ++P +  + IA+ +  E     +  +P  A 
Sbjct: 31   VSKFGDFQCNSAMAL---FKQKSKEELGVQSPKEAGEKIAAQLKDESLFSNVQASPQ-AS 86

Query: 1189 VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV--NGVQPPTLNKKLRVLVDFSSPNIAKEM 1246
            ++++ E    GFV V +S  +  + +K+I+     +Q P   KKLRV+VDFSSPN+AKEM
Sbjct: 87   LLNRDEPVLAGFVTVDISGAWLCKDLKEILKQKGHLQVPHAEKKLRVMVDFSSPNVAKEM 146

Query: 1247 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 1306
            HVGHLRSTIIG++I R+L + GH+V R+NH+GDWGTQFGMLI +L  +FPDY    P I+
Sbjct: 147  HVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDIS 206

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL AFYK++K  FD DE FK R+ + VV LQ  D    ++W +ICDVSR++F+K+Y RL+
Sbjct: 207  DLNAFYKKAKAAFDADEDFKTRSREMVVKLQGGDEAALESWRLICDVSRKEFEKVYKRLD 266

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 1426
            V+L ERGES+Y   + ++V  L  KG++ + DG K ++ +    +P+  VKSDGGF YD+
Sbjct: 267  VSLEERGESYYNAVLPKVVQELTDKGMVTVSDGAKCVFTK-VSEVPLMAVKSDGGFGYDS 325

Query: 1427 SDLAAIRQRIEEEKADWIVYVTD 1449
            +DLAA+R R+ E + DW++YVTD
Sbjct: 326  TDLAAVRDRLVERRGDWLIYVTD 348


>gi|307104781|gb|EFN53033.1| hypothetical protein CHLNCDRAFT_26194 [Chlorella variabilis]
          Length = 601

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/599 (43%), Positives = 363/599 (60%), Gaps = 45/599 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+R  L+  F  ++  AFP +  + A V   N     KFGD+QCN+AM L    K + + 
Sbjct: 36   SLRQRLAAAFQQSLDAAFPSMAGEPAIVNPCNNP---KFGDYQCNNAMGLHGKLKGQPDA 92

Query: 536  -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             KNP  +A+++       +A  P    V +   +A PGF+N+ +S  +    +  ++  G
Sbjct: 93   PKNPRAVAEAL-------VAHLPETGMVAE-TSLAGPGFINIRISPDWLASHLTTMLRQG 144

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            +    P      RV+VDFSSPN+AKEMHVGHLRSTIIGDT++  LE+ G DV+RLNH+GD
Sbjct: 145  ISTWAPAGYAGRRVVVDFSSPNVAKEMHVGHLRSTIIGDTLAHTLEFCGADVLRLNHIGD 204

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            WGTQFGMLI ++ +K P+ L  +    + DLQ  Y+ +K+RFDE+E FK+RA + V  LQ
Sbjct: 205  WGTQFGMLIQYIAEKRPEGLNAASDEDVQDLQVLYRAAKQRFDEEEAFKQRAREAVTELQ 264

Query: 711  RFDPDYKK--AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
               P+Y +  AW+ ICD SRR+FQKIYDRL V L ERGESFY   ++ +V  L ++G+ E
Sbjct: 265  GGRPEYLQACAWQRICDASRREFQKIYDRLGVQLQERGESFYNPMLKPVVDDLMQRGIAE 324

Query: 769  LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
              DG K ++ E    IP+ + KSDGGF Y ++D+AA++ RIE EKADWI+YVTD+GQ  H
Sbjct: 325  ESDGAKCVFVEG-AQIPLIVQKSDGGFGYASTDMAAVKHRIETEKADWIIYVTDMGQSSH 383

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            F L+    +  G                      KKF++RSGD V+L ELLDE  +R +D
Sbjct: 384  FDLVGGGGRGHGGGGGGGD--------------GKKFRSRSGDVVRLVELLDEAKQRIVD 429

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             +K+  R  + TP E+ E   A+ YG +KYADL ++R  +Y FS+D ML  +GNTAVY L
Sbjct: 430  TVKE--RRPDATPEEIEEMAAAMGYGAVKYADLKNHRTTNYKFSYDDMLSQQGNTAVYQL 487

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YA+ RIASI R +G +  +L   A++  V L HEKE ALA  + R +D +     +L  H
Sbjct: 488  YAHARIASIVRKSGRDVSEL---AKTARVVLGHEKEVALALQIARFSDAVDECLAELLPH 544

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
             + EYLYD+STAF++FY  C  +    E         RLLL EATA  M+ CF +L I+
Sbjct: 545  RITEYLYDLSTAFNQFYTECQVVGSPEE-------DSRLLLCEATALTMRTCFQLLGIQ 596



 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 162/354 (45%), Positives = 226/354 (63%), Gaps = 19/354 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           S+R  L+  F  ++  AFP +  + A V   N     KFGD+QCN+AM L    K + + 
Sbjct: 36  SLRQRLAAAFQQSLDAAFPSMAGEPAIVNPCNNP---KFGDYQCNNAMGLHGKLKGQPDA 92

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            KNP  +A+++       +A  P    V +   +A PGF+N+ +S  +    +  ++  G
Sbjct: 93  PKNPRAVAEAL-------VAHLPETGMVAE-TSLAGPGFINIRISPDWLASHLTTMLRQG 144

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           +    P      RV+VDFSSPN+AKEMHVGHLRSTIIGDT++  LE+ G DV+RLNH+GD
Sbjct: 145 ISTWAPAGYAGRRVVVDFSSPNVAKEMHVGHLRSTIIGDTLAHTLEFCGADVLRLNHIGD 204

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           WGTQFGMLI ++ +K P+ L  +    + DLQ  Y+ +K+RFDE+E FK+RA + V  LQ
Sbjct: 205 WGTQFGMLIQYIAEKRPEGLNAASDEDVQDLQVLYRAAKQRFDEEEAFKQRAREAVTELQ 264

Query: 321 RFDPDYKK--AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
              P+Y +  AW+ ICD SRR+FQKIYDRL V L ERGESFY   ++ +V  L ++G+ E
Sbjct: 265 GGRPEYLQACAWQRICDASRREFQKIYDRLGVQLQERGESFYNPMLKPVVDDLMQRGIAE 324

Query: 379 LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             DG K ++ E    IP+ + KSDGGF Y ++D+AA++ RIE EKADWI+YVTD
Sbjct: 325 ESDGAKCVFVEG-AQIPLIVQKSDGGFGYASTDMAAVKHRIETEKADWIIYVTD 377



 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 162/354 (45%), Positives = 226/354 (63%), Gaps = 19/354 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+R  L+  F  ++  AFP +  + A V   N     KFGD+QCN+AM L    K + + 
Sbjct: 36   SLRQRLAAAFQQSLDAAFPSMAGEPAIVNPCNNP---KFGDYQCNNAMGLHGKLKGQPDA 92

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             KNP  +A+++       +A  P    V +   +A PGF+N+ +S  +    +  ++  G
Sbjct: 93   PKNPRAVAEAL-------VAHLPETGMVAE-TSLAGPGFINIRISPDWLASHLTTMLRQG 144

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            +    P      RV+VDFSSPN+AKEMHVGHLRSTIIGDT++  LE+ G DV+RLNH+GD
Sbjct: 145  ISTWAPAGYAGRRVVVDFSSPNVAKEMHVGHLRSTIIGDTLAHTLEFCGADVLRLNHIGD 204

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            WGTQFGMLI ++ +K P+ L  +    + DLQ  Y+ +K+RFDE+E FK+RA + V  LQ
Sbjct: 205  WGTQFGMLIQYIAEKRPEGLNAASDEDVQDLQVLYRAAKQRFDEEEAFKQRAREAVTELQ 264

Query: 1338 RFDPDYKK--AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
               P+Y +  AW+ ICD SRR+FQKIYDRL V L ERGESFY   ++ +V  L ++G+ E
Sbjct: 265  GGRPEYLQACAWQRICDASRREFQKIYDRLGVQLQERGESFYNPMLKPVVDDLMQRGIAE 324

Query: 1396 LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              DG K ++ E    IP+ + KSDGGF Y ++D+AA++ RIE EKADWI+YVTD
Sbjct: 325  ESDGAKCVFVEG-AQIPLIVQKSDGGFGYASTDMAAVKHRIETEKADWIIYVTD 377


>gi|428203983|ref|YP_007082572.1| arginyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
 gi|427981415|gb|AFY79015.1| arginyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
          Length = 586

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 264/569 (46%), Positives = 367/569 (64%), Gaps = 41/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N A++L K        + P  IAQ        +L  N  LA + +   +A PG
Sbjct: 38   KFGDYQSNIALSLAKQLG-----QQPRAIAQ--------QLVDNLKLADLCENPTIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   Y   Q+  +  +   GV+    ++  RV+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLTLKPAYLETQLNSLQKDFRLGVEKAKQSQ--RVIVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKE 687
            GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ FPD LT +    I DL AFYK+
Sbjct: 143  GDCIARILEFRGHDVLRLNHVGDWGTQFGMLIAYLREVFPDALTTADVLDIGDLVAFYKQ 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +K RFDEDE F++ A Q VV LQ    D + AW+++CD SRR+FQ IYD L++ LTERGE
Sbjct: 203  AKIRFDEDENFREVARQEVVKLQAGTEDSRHAWQLLCDQSRREFQVIYDLLDIKLTERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   + ++V  L+K+GLL+ D G K ++ E     +   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPEVVEDLDKQGLLKEDAGAKCVFLEGFINKEGQPLPLIVQKSDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AAI+ R++++ A+ I+YVTD GQ  HF  + + AK+AG L P+   +  V FG+VLGED 
Sbjct: 323  AAIKYRVQQDGAERIIYVTDAGQSHHFSQVFQVAKRAGFL-PDNVEVVHVPFGLVLGEDG 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSL----DKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            +K KTRSGDT+KL +LLDE + R+      +L+ +NR    +   +    Q V    +KY
Sbjct: 382  RKLKTRSGDTIKLKDLLDEAVDRARKDLEQRLEQENRKE--SKEFIDRVAQVVGISAVKY 439

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  +Y+FS+DKML  +GNTA Y+LYAY R+ SI R   I+ E +   A  + V 
Sbjct: 440  ADLSQNRTSNYIFSYDKMLSLQGNTAPYMLYAYARVKSIGREGNIDFESI---AGDSKVI 496

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLY-DISTAFSEFYDNCYCIEKDAEG 1037
            LEHE E ALAK +L++ +V+  V RDL  + LCEYLY ++S  F+ FY+NC  ++ +   
Sbjct: 497  LEHETELALAKAILQLTEVIKYVERDLMPNRLCEYLYEEVSKKFNRFYENCPVLKAE--- 553

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
              + + T RL+L + TA+ +K    +L I
Sbjct: 554  --EPIRTSRLILCDLTARTLKLGLSLLGI 580



 Score =  294 bits (752), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 160/329 (48%), Positives = 217/329 (65%), Gaps = 25/329 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N A++L K        + P  IAQ        +L  N  LA + +   +A PG
Sbjct: 38  KFGDYQSNIALSLAKQLG-----QQPRAIAQ--------QLVDNLKLADLCENPTIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   Y   Q+  +  +   GV+    ++  RV+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINLTLKPAYLETQLNSLQKDFRLGVEKAKQSQ--RVIVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKE 297
           GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ FPD LT +    I DL AFYK+
Sbjct: 143 GDCIARILEFRGHDVLRLNHVGDWGTQFGMLIAYLREVFPDALTTADVLDIGDLVAFYKQ 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +K RFDEDE F++ A Q VV LQ    D + AW+++CD SRR+FQ IYD L++ LTERGE
Sbjct: 203 AKIRFDEDENFREVARQEVVKLQAGTEDSRHAWQLLCDQSRREFQVIYDLLDIKLTERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   + ++V  L+K+GLL+ D G K ++ E     +   +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPLLPEVVEDLDKQGLLKEDAGAKCVFLEGFINKEGQPLPLIVQKSDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTDHRSYHQVLQ 441
           AAI+ R++++ A+ I+YVTD    H   Q
Sbjct: 323 AAIKYRVQQDGAERIIYVTDAGQSHHFSQ 351



 Score =  294 bits (752), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 160/329 (48%), Positives = 217/329 (65%), Gaps = 25/329 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N A++L K        + P  IAQ        +L  N  LA + +   +A PG
Sbjct: 38   KFGDYQSNIALSLAKQLG-----QQPRAIAQ--------QLVDNLKLADLCENPTIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   Y   Q+  +  +   GV+    ++  RV+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLTLKPAYLETQLNSLQKDFRLGVEKAKQSQ--RVIVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKE 1314
            GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ FPD LT +    I DL AFYK+
Sbjct: 143  GDCIARILEFRGHDVLRLNHVGDWGTQFGMLIAYLREVFPDALTTADVLDIGDLVAFYKQ 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +K RFDEDE F++ A Q VV LQ    D + AW+++CD SRR+FQ IYD L++ LTERGE
Sbjct: 203  AKIRFDEDENFREVARQEVVKLQAGTEDSRHAWQLLCDQSRREFQVIYDLLDIKLTERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   + ++V  L+K+GLL+ D G K ++ E     +   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPEVVEDLDKQGLLKEDAGAKCVFLEGFINKEGQPLPLIVQKSDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            AAI+ R++++ A+ I+YVTD    H   Q
Sbjct: 323  AAIKYRVQQDGAERIIYVTDAGQSHHFSQ 351


>gi|56750043|ref|YP_170744.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81596947|sp|Q5N643.1|SYR_SYNP6 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|56685002|dbj|BAD78224.1| arginyl-tRNA-synthetase [Synechococcus elongatus PCC 6301]
          Length = 584

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/602 (45%), Positives = 376/602 (62%), Gaps = 47/602 (7%)

Query: 481  LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 538
            L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 8    LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58

Query: 539  FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 595
              IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 59   RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111  QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168

Query: 656  QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 169  QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
               ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 229  ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288

Query: 774  KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD GQ  H
Sbjct: 289  QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            F  + + A++AG L P   +++ V FG+V GED KK KTR+GDTV+L +LLDE + R+  
Sbjct: 349  FAQVFQVAQRAGWL-PAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRART 407

Query: 889  KLKDKNRHTEL--TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
             L  +    E   TP  +    QAV  G +KYADLS NRN +Y+FSFDKML  +GNTA Y
Sbjct: 408  DLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLALQGNTAPY 467

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE--HEKEFALAKTLLRMNDVLMLVTRD 1004
            LLYAY RI  IAR  GI+       AQ  PV+ E     E +LAK +L++ +VL  V RD
Sbjct: 468  LLYAYVRIQGIARKGGIDF------AQLDPVAAELTEPTERSLAKQVLQLGEVLDEVARD 521

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            L  + LC YL+++S  F++FYD C  +  +     +   T RLLL + TA+ +K    +L
Sbjct: 522  LLPNRLCSYLFELSQTFNQFYDRCPILNAE-----EPQRTSRLLLCDLTARTLKLGLSLL 576

Query: 1065 NI 1066
             I
Sbjct: 577  GI 578



 Score =  294 bits (752), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 172/417 (41%), Positives = 250/417 (59%), Gaps = 38/417 (9%)

Query: 91  LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 148
           L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 8   LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58

Query: 149 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 205
             IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 59  RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
           QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168

Query: 266 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 169 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
              ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 229 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288

Query: 384 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
           + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD    + 
Sbjct: 289 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 439 VLQAIAEEEKKQGISSSSSSQ------TKGT-AKKMNVPVRDRMSVRDYLSDVFTHA 488
             Q     ++   + +++  +       +G   KK+     D + +RD L +    A
Sbjct: 349 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRA 405



 Score =  293 bits (750), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 166/366 (45%), Positives = 232/366 (63%), Gaps = 34/366 (9%)

Query: 1108 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 1165
            L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 8    LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58

Query: 1166 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 1222
              IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 59   RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111  QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168

Query: 1283 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 169  QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
               ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 229  ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288

Query: 1401 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH---RS 1452
            + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD      
Sbjct: 289  QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 1453 YHQVLQ 1458
            + QV Q
Sbjct: 349  FAQVFQ 354


>gi|93141321|sp|Q8KPU9.2|SYR_SYNE7 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
          Length = 584

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/602 (45%), Positives = 376/602 (62%), Gaps = 47/602 (7%)

Query: 481  LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 538
            L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 8    LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58

Query: 539  FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 595
              IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 59   RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111  QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168

Query: 656  QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 169  QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
               ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 229  ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288

Query: 774  KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD GQ  H
Sbjct: 289  QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            F  + + A++AG L P   +++ V FG+V GED KK KTR+GDTV+L +LLDE + R+  
Sbjct: 349  FAQVFQVAQRAGWL-PAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRART 407

Query: 889  KLKDKNRHTEL--TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
             L  +    E   TP  +    QAV  G +KYADLS NRN +Y+FSFDKML  +GNTA Y
Sbjct: 408  DLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLALQGNTAPY 467

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVS--LEHEKEFALAKTLLRMNDVLMLVTRD 1004
            LLYAY RI  IAR  GI+       AQ  PV+  L    E +LAK +L++ +VL  V RD
Sbjct: 468  LLYAYVRIQGIARKGGIDF------AQLDPVAAVLTEPTERSLAKQVLQLGEVLDEVARD 521

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            L  + LC YL+++S  F++FYD C  +  +     +   T RLLL + TA+ +K    +L
Sbjct: 522  LLPNRLCSYLFELSQTFNQFYDRCPILNAE-----EPQRTSRLLLCDLTARTLKLGLSLL 576

Query: 1065 NI 1066
             I
Sbjct: 577  GI 578



 Score =  294 bits (752), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 172/417 (41%), Positives = 250/417 (59%), Gaps = 38/417 (9%)

Query: 91  LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 148
           L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 8   LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58

Query: 149 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 205
             IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 59  RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
           QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168

Query: 266 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 169 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
              ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 229 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288

Query: 384 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
           + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD    + 
Sbjct: 289 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 439 VLQAIAEEEKKQGISSSSSSQ------TKGT-AKKMNVPVRDRMSVRDYLSDVFTHA 488
             Q     ++   + +++  +       +G   KK+     D + +RD L +    A
Sbjct: 349 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRA 405



 Score =  293 bits (750), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 166/366 (45%), Positives = 232/366 (63%), Gaps = 34/366 (9%)

Query: 1108 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 1165
            L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 8    LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58

Query: 1166 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 1222
              IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 59   RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111  QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168

Query: 1283 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 169  QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
               ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 229  ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288

Query: 1401 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH---RS 1452
            + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD      
Sbjct: 289  QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 1453 YHQVLQ 1458
            + QV Q
Sbjct: 349  FAQVFQ 354


>gi|113477422|ref|YP_723483.1| arginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|122964531|sp|Q10XL4.1|SYR_TRIEI RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|110168470|gb|ABG53010.1| arginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 585

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/606 (44%), Positives = 383/606 (63%), Gaps = 46/606 (7%)

Query: 477  VRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            + + L   F  A+  AF +  +G     V++TN K    FGD+QCN AM+L K  KDK  
Sbjct: 4    IVEQLKSRFDKALITAFGQDLVGTDPMIVSTTNPK----FGDYQCNVAMSLAKKLKDK-- 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
                    ++IA+ + + L  N          E+A PGF+N+ L   Y    ++ II + 
Sbjct: 58   -------PKAIATQIINNLNINDYFYPP----EIAGPGFINLSLKPEYIENCLETIIKDE 106

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
                 PT N + RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH+V+RLNHVGD
Sbjct: 107  KLNISPTKNPQ-RVVIDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGHNVLRLNHVGD 165

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            WGTQFGMLI++L++ FP+ L  +    I DL AFYK+SKKRFDED+ F++++ Q VV LQ
Sbjct: 166  WGTQFGMLISYLREAFPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQEKSRQEVVNLQ 225

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
                D + AWE++C+ SRR+FQ IYD L++ L ERGESFY   +  +V  L + GLLE  
Sbjct: 226  TGAEDSRHAWELLCNQSRREFQVIYDLLDIKLNERGESFYNSMLPGIVEELNRLGLLEES 285

Query: 771  DGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
            DG + ++        GED   +P+ + KSDGG+ Y T+DLAA+  RIE+E A  ++YVTD
Sbjct: 286  DGAQCVFLSGFTNKEGED---VPLIVKKSDGGYNYATTDLAALVHRIEKEGATRLIYVTD 342

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQ  HF  + + AKKAG + P    +  V FG+VLGED KK KTRSG+TV+L +LLDE 
Sbjct: 343  AGQANHFSQVWQVAKKAGWI-PENVEIVNVFFGLVLGEDGKKLKTRSGETVRLIDLLDEA 401

Query: 883  LRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            + ++ + L+ + +  +   +E  +    Q V    +KYADLS NR  +YVFSFDKML  +
Sbjct: 402  INKARNDLEKRLKDEKRLESEEFIKNVAQVVGLSAVKYADLSQNRKSNYVFSFDKMLALQ 461

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAY R+  I+R   IN E LR  A+   + L+ E E  L K LL++N+VL +
Sbjct: 462  GNTAPYLLYAYVRVQGISRKGEINFEKLRKDAK---IILQDEPELVLGKHLLKLNEVLNI 518

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            VT +L  + LCEYLY++S  F++F++NC  ++ +     + + T RLLL + TA+ +K  
Sbjct: 519  VTIELLPNRLCEYLYELSEKFNKFFENCPVLKSE-----EPLRTSRLLLCDLTARTLKLG 573

Query: 1061 FDILNI 1066
              +L I
Sbjct: 574  LYLLGI 579



 Score =  293 bits (750), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 166/360 (46%), Positives = 230/360 (63%), Gaps = 35/360 (9%)

Query: 87  VRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           + + L   F  A+  AF +  +G     V++TN K    FGD+QCN AM+L K  KDK  
Sbjct: 4   IVEQLKSRFDKALITAFGQDLVGTDPMIVSTTNPK----FGDYQCNVAMSLAKKLKDK-- 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
                   ++IA+ + + L  N          E+A PGF+N+ L   Y    ++ II + 
Sbjct: 58  -------PKAIATQIINNLNINDYFYPP----EIAGPGFINLSLKPEYIENCLETIIKDE 106

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
                PT N + RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH+V+RLNHVGD
Sbjct: 107 KLNISPTKNPQ-RVVIDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGHNVLRLNHVGD 165

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           WGTQFGMLI++L++ FP+ L  +    I DL AFYK+SKKRFDED+ F++++ Q VV LQ
Sbjct: 166 WGTQFGMLISYLREAFPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQEKSRQEVVNLQ 225

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
               D + AWE++C+ SRR+FQ IYD L++ L ERGESFY   +  +V  L + GLLE  
Sbjct: 226 TGAEDSRHAWELLCNQSRREFQVIYDLLDIKLNERGESFYNSMLPGIVEELNRLGLLEES 285

Query: 381 DGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           DG + ++        GED   +P+ + KSDGG+ Y T+DLAA+  RIE+E A  ++YVTD
Sbjct: 286 DGAQCVFLSGFTNKEGED---VPLIVKKSDGGYNYATTDLAALVHRIEKEGATRLIYVTD 342



 Score =  293 bits (750), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 166/360 (46%), Positives = 230/360 (63%), Gaps = 35/360 (9%)

Query: 1104 VRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            + + L   F  A+  AF +  +G     V++TN K    FGD+QCN AM+L K  KDK  
Sbjct: 4    IVEQLKSRFDKALITAFGQDLVGTDPMIVSTTNPK----FGDYQCNVAMSLAKKLKDK-- 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
                    ++IA+ + + L  N          E+A PGF+N+ L   Y    ++ II + 
Sbjct: 58   -------PKAIATQIINNLNINDYFYPP----EIAGPGFINLSLKPEYIENCLETIIKDE 106

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
                 PT N + RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH+V+RLNHVGD
Sbjct: 107  KLNISPTKNPQ-RVVIDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGHNVLRLNHVGD 165

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            WGTQFGMLI++L++ FP+ L  +    I DL AFYK+SKKRFDED+ F++++ Q VV LQ
Sbjct: 166  WGTQFGMLISYLREAFPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQEKSRQEVVNLQ 225

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
                D + AWE++C+ SRR+FQ IYD L++ L ERGESFY   +  +V  L + GLLE  
Sbjct: 226  TGAEDSRHAWELLCNQSRREFQVIYDLLDIKLNERGESFYNSMLPGIVEELNRLGLLEES 285

Query: 1398 DGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DG + ++        GED   +P+ + KSDGG+ Y T+DLAA+  RIE+E A  ++YVTD
Sbjct: 286  DGAQCVFLSGFTNKEGED---VPLIVKKSDGGYNYATTDLAALVHRIEKEGATRLIYVTD 342


>gi|356497573|ref|XP_003517634.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Glycine max]
          Length = 604

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 267/600 (44%), Positives = 378/600 (63%), Gaps = 29/600 (4%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            SV+  L+ +F  +++   P+  D    + +   K   KFGD+QCN+AM +    K K   
Sbjct: 19   SVKRQLAQLFDLSLRATVPDEPDVVPLIDACAVKGGVKFGDYQCNNAMGIWSKMKGKQTG 78

Query: 536  -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             + P  I Q+I +        N   +++ID   VA PGFVNV LS+ +  E ++ ++++G
Sbjct: 79   FRGPPAIGQAIVN--------NLPPSEMIDSCSVAGPGFVNVVLSKKWIAESLQRMLIDG 130

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD-VVRLNHVG 651
            +    P L  K R L+DFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   + V+R NHVG
Sbjct: 131  INSWAPRLPVK-RALIDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVECVIRRNHVG 189

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPP-IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            DWGTQFGMLI +L +KFP+    S   I DLQAFYK SK RFD D  FK RA Q VV LQ
Sbjct: 190  DWGTQFGMLITNLFEKFPNPDDVSEADIGDLQAFYKASKVRFDSDPEFKLRAQQAVVRLQ 249

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              +  Y+KAW+ ICDVSR +F K+Y RL V L ERGESFY  ++  ++  L+  GL+E  
Sbjct: 250  SGEIKYRKAWKQICDVSRAEFDKVYQRLGVQLEERGESFYNPYIPGVLEKLDNLGLIEES 309

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            DG ++++ E    IP+  VK DGG+ Y T+DLA++  R+ EEK +WIVYVTD+GQ  HF 
Sbjct: 310  DGARVIYVEGV-DIPLIAVKRDGGYNYFTTDLASLWYRLNEEKLEWIVYVTDIGQQQHFD 368

Query: 831  LLEECAKKAGILNPNKT---RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            +L +  ++AG L  ++    +   +GFG+VLGED K+F+TRS + V+L +LLDE  RR  
Sbjct: 369  MLFKAYRRAGWLPKDENAYPKCTHIGFGLVLGEDGKRFRTRSSEVVRLVDLLDEAKRRCK 428

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
              + +++   + +  E+ +  +A+ YG +KYADL  NR  +Y F+FD+ML+D+GNTAVYL
Sbjct: 429  IAILERDTAKDWSEEEIEKTSEAIGYGAVKYADLKINRLTNYTFNFDQMLNDKGNTAVYL 488

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+ RI SI R +G + E+++   ++  + L+HE E AL   LL+  +V       L  
Sbjct: 489  LYAHARICSIIRKSGKDIEEVK---RNGKIVLDHEDERALGLHLLQFPEVYEEACTYLLP 545

Query: 1008 HHLCEYLYDISTAFS-EFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            + LCEYLY+++  F+ +FY NC  +    E       T RLLL EAT  VM+ CF +L I
Sbjct: 546  NFLCEYLYNLAEIFTKKFYANCQVVGSPEE-------TSRLLLCEATVTVMRHCFYLLGI 598



 Score =  299 bits (766), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 167/352 (47%), Positives = 226/352 (64%), Gaps = 15/352 (4%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           SV+  L+ +F  +++   P+  D    + +   K   KFGD+QCN+AM +    K K   
Sbjct: 19  SVKRQLAQLFDLSLRATVPDEPDVVPLIDACAVKGGVKFGDYQCNNAMGIWSKMKGKQTG 78

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            + P  I Q+I +        N   +++ID   VA PGFVNV LS+ +  E ++ ++++G
Sbjct: 79  FRGPPAIGQAIVN--------NLPPSEMIDSCSVAGPGFVNVVLSKKWIAESLQRMLIDG 130

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD-VVRLNHVG 261
           +    P L  K R L+DFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   + V+R NHVG
Sbjct: 131 INSWAPRLPVK-RALIDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVECVIRRNHVG 189

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPP-IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           DWGTQFGMLI +L +KFP+    S   I DLQAFYK SK RFD D  FK RA Q VV LQ
Sbjct: 190 DWGTQFGMLITNLFEKFPNPDDVSEADIGDLQAFYKASKVRFDSDPEFKLRAQQAVVRLQ 249

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             +  Y+KAW+ ICDVSR +F K+Y RL V L ERGESFY  ++  ++  L+  GL+E  
Sbjct: 250 SGEIKYRKAWKQICDVSRAEFDKVYQRLGVQLEERGESFYNPYIPGVLEKLDNLGLIEES 309

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           DG ++++ E    IP+  VK DGG+ Y T+DLA++  R+ EEK +WIVYVTD
Sbjct: 310 DGARVIYVEGV-DIPLIAVKRDGGYNYFTTDLASLWYRLNEEKLEWIVYVTD 360



 Score =  299 bits (766), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 167/352 (47%), Positives = 226/352 (64%), Gaps = 15/352 (4%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            SV+  L+ +F  +++   P+  D    + +   K   KFGD+QCN+AM +    K K   
Sbjct: 19   SVKRQLAQLFDLSLRATVPDEPDVVPLIDACAVKGGVKFGDYQCNNAMGIWSKMKGKQTG 78

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             + P  I Q+I +        N   +++ID   VA PGFVNV LS+ +  E ++ ++++G
Sbjct: 79   FRGPPAIGQAIVN--------NLPPSEMIDSCSVAGPGFVNVVLSKKWIAESLQRMLIDG 130

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD-VVRLNHVG 1278
            +    P L  K R L+DFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   + V+R NHVG
Sbjct: 131  INSWAPRLPVK-RALIDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVECVIRRNHVG 189

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPP-IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            DWGTQFGMLI +L +KFP+    S   I DLQAFYK SK RFD D  FK RA Q VV LQ
Sbjct: 190  DWGTQFGMLITNLFEKFPNPDDVSEADIGDLQAFYKASKVRFDSDPEFKLRAQQAVVRLQ 249

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              +  Y+KAW+ ICDVSR +F K+Y RL V L ERGESFY  ++  ++  L+  GL+E  
Sbjct: 250  SGEIKYRKAWKQICDVSRAEFDKVYQRLGVQLEERGESFYNPYIPGVLEKLDNLGLIEES 309

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DG ++++ E    IP+  VK DGG+ Y T+DLA++  R+ EEK +WIVYVTD
Sbjct: 310  DGARVIYVEGV-DIPLIAVKRDGGYNYFTTDLASLWYRLNEEKLEWIVYVTD 360


>gi|168014459|ref|XP_001759769.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688899|gb|EDQ75273.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 606

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 269/598 (44%), Positives = 379/598 (63%), Gaps = 32/598 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            SVR  + ++   A+    P++ D    VA        K GD+QCN+AM +    K K   
Sbjct: 28   SVRQQVVNLVREALATTVPDVEDIEPQVAVCGNP---KNGDYQCNNAMGIWSKIKGKNTS 84

Query: 536  -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             KNP  I Q+ +   +S          + D + VA PGFVN+ LS  +  +++  ++ +G
Sbjct: 85   FKNPNAIGQAWSLPRSS----------LTDSVSVAGPGFVNIKLSDRWIEKKLHQLLSHG 134

Query: 595  V--QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            V    P L+ K RV+VDFSSPNIAKEMHVGHLRSTIIGD++ R+LEY G +V+R NHVGD
Sbjct: 135  VGEWAPALSYK-RVVVDFSSPNIAKEMHVGHLRSTIIGDSLCRMLEYCGVEVLRRNHVGD 193

Query: 653  WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            WGTQFGMLI +L ++FP++       + DLQ FYK++K +FD D  FK++A + VV LQ 
Sbjct: 194  WGTQFGMLIEYLFEEFPNWEEIGDQAVGDLQDFYKKAKIKFDVDAAFKEKAQKAVVLLQG 253

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             +P Y+ AW  ICDVSR+ F ++Y RL VTL E+GES Y +++  +V  L+ KGL+E  +
Sbjct: 254  GNPQYRAAWAKICDVSRKSFDQVYKRLKVTLEEKGESAYNEYIPGVVEELKGKGLVEDSE 313

Query: 772  GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            G K++    + +IP+ +VKSDGGF Y ++D+ A+  R+ EEKA+ +VYVTD+GQ  HF +
Sbjct: 314  GAKVIKVSGQ-TIPLILVKSDGGFNYASTDMTAMWYRLNEEKAEVMVYVTDVGQSQHFDM 372

Query: 832  LEECAKKAGILNPNKT---RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            + + AK+AG L  +++   R   VGFG+VLG D K+F+TRS + V+L +LLDE   RS  
Sbjct: 373  VFKAAKRAGWLPEDESQLPRARHVGFGLVLGADGKRFRTRSTEVVRLVDLLDEAKDRSKQ 432

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             L ++   +E +  EL EA +A+ YG IKYADL +NR  +Y F+FD+MLD RGNTAVYLL
Sbjct: 433  GLVERGNFSEWSAEELEEAAEALGYGAIKYADLKNNRLTNYTFNFDQMLDIRGNTAVYLL 492

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YA+ RI SI R +  N E+L+   Q   + L+H  E AL   L+R  + +     DL  +
Sbjct: 493  YAHARICSIIRKSEKNVEELKKTGQ---MKLQHPSERALGLQLIRFGEFVEDAASDLLPN 549

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             LCEYLY +S  F++FY NC  +  + E       T RLLL EATA +M++CF +L I
Sbjct: 550  VLCEYLYTLSGMFTDFYTNCKVVGSEEE-------TSRLLLCEATAVIMRECFKLLGI 600



 Score =  288 bits (737), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 225/351 (64%), Gaps = 19/351 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           SVR  + ++   A+    P++ D    VA        K GD+QCN+AM +    K K   
Sbjct: 28  SVRQQVVNLVREALATTVPDVEDIEPQVAVCGNP---KNGDYQCNNAMGIWSKIKGKNTS 84

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            KNP  I Q+ +   +S          + D + VA PGFVN+ LS  +  +++  ++ +G
Sbjct: 85  FKNPNAIGQAWSLPRSS----------LTDSVSVAGPGFVNIKLSDRWIEKKLHQLLSHG 134

Query: 205 V--QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           V    P L+ K RV+VDFSSPNIAKEMHVGHLRSTIIGD++ R+LEY G +V+R NHVGD
Sbjct: 135 VGEWAPALSYK-RVVVDFSSPNIAKEMHVGHLRSTIIGDSLCRMLEYCGVEVLRRNHVGD 193

Query: 263 WGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           WGTQFGMLI +L ++FP++       + DLQ FYK++K +FD D  FK++A + VV LQ 
Sbjct: 194 WGTQFGMLIEYLFEEFPNWEEIGDQAVGDLQDFYKKAKIKFDVDAAFKEKAQKAVVLLQG 253

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            +P Y+ AW  ICDVSR+ F ++Y RL VTL E+GES Y +++  +V  L+ KGL+E  +
Sbjct: 254 GNPQYRAAWAKICDVSRKSFDQVYKRLKVTLEEKGESAYNEYIPGVVEELKGKGLVEDSE 313

Query: 382 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           G K++    + +IP+ +VKSDGGF Y ++D+ A+  R+ EEKA+ +VYVTD
Sbjct: 314 GAKVIKVSGQ-TIPLILVKSDGGFNYASTDMTAMWYRLNEEKAEVMVYVTD 363



 Score =  288 bits (737), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 225/351 (64%), Gaps = 19/351 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            SVR  + ++   A+    P++ D    VA        K GD+QCN+AM +    K K   
Sbjct: 28   SVRQQVVNLVREALATTVPDVEDIEPQVAVCGNP---KNGDYQCNNAMGIWSKIKGKNTS 84

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             KNP  I Q+ +   +S          + D + VA PGFVN+ LS  +  +++  ++ +G
Sbjct: 85   FKNPNAIGQAWSLPRSS----------LTDSVSVAGPGFVNIKLSDRWIEKKLHQLLSHG 134

Query: 1222 V--QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            V    P L+ K RV+VDFSSPNIAKEMHVGHLRSTIIGD++ R+LEY G +V+R NHVGD
Sbjct: 135  VGEWAPALSYK-RVVVDFSSPNIAKEMHVGHLRSTIIGDSLCRMLEYCGVEVLRRNHVGD 193

Query: 1280 WGTQFGMLIAHLQDKFPDY-LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            WGTQFGMLI +L ++FP++       + DLQ FYK++K +FD D  FK++A + VV LQ 
Sbjct: 194  WGTQFGMLIEYLFEEFPNWEEIGDQAVGDLQDFYKKAKIKFDVDAAFKEKAQKAVVLLQG 253

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +P Y+ AW  ICDVSR+ F ++Y RL VTL E+GES Y +++  +V  L+ KGL+E  +
Sbjct: 254  GNPQYRAAWAKICDVSRKSFDQVYKRLKVTLEEKGESAYNEYIPGVVEELKGKGLVEDSE 313

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G K++    + +IP+ +VKSDGGF Y ++D+ A+  R+ EEKA+ +VYVTD
Sbjct: 314  GAKVIKVSGQ-TIPLILVKSDGGFNYASTDMTAMWYRLNEEKAEVMVYVTD 363


>gi|356534732|ref|XP_003535906.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Glycine max]
          Length = 651

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/623 (43%), Positives = 387/623 (62%), Gaps = 32/623 (5%)

Query: 453  SSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH 512
            SS +  Q+  TA    + + +  SV+  L+ +F  +++   P+       V +   K   
Sbjct: 46   SSVTKPQSTSTAI---IEIDNPASVKRQLAQLFDLSLRETVPDEPHVVPLVDACAVKGGA 102

Query: 513  KFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
            KFGD+QCN+AM +    K K    + P  I Q+I +        N   +++ID   VA P
Sbjct: 103  KFGDYQCNNAMGIWSRMKGKQTGFRGPPAIGQAIIN--------NLPPSEMIDSCSVAGP 154

Query: 572  GFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            GFVNV LS+ +  E ++ ++++G+    P L  K R L+DFSSPNIAKEMHVGHLRSTII
Sbjct: 155  GFVNVVLSKKWIAESLRRMLIDGINSWAPRLPVK-RALIDFSSPNIAKEMHVGHLRSTII 213

Query: 630  GDTISRLLEYLGHD-VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP-IADLQAFYKE 687
            GDT++R+LE+   + V+R NHVGDWGTQFGMLI +L +KFP+    S   I DLQAFYK 
Sbjct: 214  GDTLARMLEFSHVECVIRRNHVGDWGTQFGMLITYLFEKFPNPDNVSEADIGDLQAFYKA 273

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            SK RFD D  FK RA Q VV+LQ  +  Y KAW+ IC+VSR +F K+Y  L + L ERGE
Sbjct: 274  SKLRFDSDPEFKLRAQQAVVSLQSGEIKYHKAWQQICEVSRAEFDKVYQCLGIQLEERGE 333

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQ 807
            SFY  ++  ++  L+  GL+E  DG ++++ E    IP+  VK DGG+ Y T+DLA++  
Sbjct: 334  SFYNPYIPGVLEKLDNLGLIEESDGARVIYVEGV-DIPLIAVKRDGGYNYFTTDLASLWY 392

Query: 808  RIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKT---RMDFVGFGVVLGEDRKK 864
            R+ EEK +WIVYVTD+GQ  HF +L +  ++AG L  ++    +   +GFG+VLGED K+
Sbjct: 393  RLNEEKLEWIVYVTDIGQQQHFDMLFKAYRRAGWLPKDENAYPKCTHIGFGLVLGEDGKR 452

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            F+TRS + V+L +LLDE  RR    + +++   + +  E+ +  +AV YG +KYADL  N
Sbjct: 453  FRTRSSEVVRLVDLLDEAKRRCKIAILERDTTKDWSEEEIEKTSEAVGYGAVKYADLKIN 512

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  +Y F+FD+ML+D+GNTAVYLLYA+ RI SI R +G + E+++   ++  + L+HE E
Sbjct: 513  RLTNYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEEVK---RNGKIVLDHEDE 569

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFS-EFYDNCYCIEKDAEGKIKTVH 1043
             AL   LL+  +V      +L  + LCEYLY+++  F+ +FY NC  +    E       
Sbjct: 570  RALGLHLLQFPEVFEEACTNLLPNFLCEYLYNLAEIFTKKFYANCQVVGSPEE------- 622

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
            T RLLL EAT  VM+ CF +L I
Sbjct: 623  TSRLLLCEATVTVMRHCFYLLGI 645



 Score =  295 bits (754), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 238/394 (60%), Gaps = 25/394 (6%)

Query: 44  HRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAF 103
           HR A+         K Q  S +    T  A  +++ P     SV+  L+ +F  +++   
Sbjct: 34  HRFAL------SATKTQQSSVTKPQSTSTAIIEIDNPA----SVKRQLAQLFDLSLRETV 83

Query: 104 PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVTSE 162
           P+       V +   K   KFGD+QCN+AM +    K K    + P  I Q+I +     
Sbjct: 84  PDEPHVVPLVDACAVKGGAKFGDYQCNNAMGIWSRMKGKQTGFRGPPAIGQAIIN----- 138

Query: 163 LATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDF 220
              N   +++ID   VA PGFVNV LS+ +  E ++ ++++G+    P L  K R L+DF
Sbjct: 139 ---NLPPSEMIDSCSVAGPGFVNVVLSKKWIAESLRRMLIDGINSWAPRLPVK-RALIDF 194

Query: 221 SSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD-VVRLNHVGDWGTQFGMLIAHLQDKFP 279
           SSPNIAKEMHVGHLRSTIIGDT++R+LE+   + V+R NHVGDWGTQFGMLI +L +KFP
Sbjct: 195 SSPNIAKEMHVGHLRSTIIGDTLARMLEFSHVECVIRRNHVGDWGTQFGMLITYLFEKFP 254

Query: 280 DYLTKSPP-IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSR 338
           +    S   I DLQAFYK SK RFD D  FK RA Q VV+LQ  +  Y KAW+ IC+VSR
Sbjct: 255 NPDNVSEADIGDLQAFYKASKLRFDSDPEFKLRAQQAVVSLQSGEIKYHKAWQQICEVSR 314

Query: 339 RDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTI 398
            +F K+Y  L + L ERGESFY  ++  ++  L+  GL+E  DG ++++ E    IP+  
Sbjct: 315 AEFDKVYQCLGIQLEERGESFYNPYIPGVLEKLDNLGLIEESDGARVIYVEGV-DIPLIA 373

Query: 399 VKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           VK DGG+ Y T+DLA++  R+ EEK +WIVYVTD
Sbjct: 374 VKRDGGYNYFTTDLASLWYRLNEEKLEWIVYVTD 407



 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 243/396 (61%), Gaps = 23/396 (5%)

Query: 1062 DILNI---RTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQV 1118
            D+L +   R A++  + +Q  SS    Q+   A    + + +  SV+  L+ +F  +++ 
Sbjct: 27   DLLKVASHRFALSATKTQQ--SSVTKPQSTSTAI---IEIDNPASVKRQLAQLFDLSLRE 81

Query: 1119 AFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQSIASVVT 1177
              P+       V +   K   KFGD+QCN+AM +    K K    + P  I Q+I +   
Sbjct: 82   TVPDEPHVVPLVDACAVKGGAKFGDYQCNNAMGIWSRMKGKQTGFRGPPAIGQAIIN--- 138

Query: 1178 SELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLV 1235
                 N   +++ID   VA PGFVNV LS+ +  E ++ ++++G+    P L  K R L+
Sbjct: 139  -----NLPPSEMIDSCSVAGPGFVNVVLSKKWIAESLRRMLIDGINSWAPRLPVK-RALI 192

Query: 1236 DFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD-VVRLNHVGDWGTQFGMLIAHLQDK 1294
            DFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   + V+R NHVGDWGTQFGMLI +L +K
Sbjct: 193  DFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSHVECVIRRNHVGDWGTQFGMLITYLFEK 252

Query: 1295 FPDYLTKSPP-IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDV 1353
            FP+    S   I DLQAFYK SK RFD D  FK RA Q VV+LQ  +  Y KAW+ IC+V
Sbjct: 253  FPNPDNVSEADIGDLQAFYKASKLRFDSDPEFKLRAQQAVVSLQSGEIKYHKAWQQICEV 312

Query: 1354 SRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPM 1413
            SR +F K+Y  L + L ERGESFY  ++  ++  L+  GL+E  DG ++++ E    IP+
Sbjct: 313  SRAEFDKVYQCLGIQLEERGESFYNPYIPGVLEKLDNLGLIEESDGARVIYVEGV-DIPL 371

Query: 1414 TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              VK DGG+ Y T+DLA++  R+ EEK +WIVYVTD
Sbjct: 372  IAVKRDGGYNYFTTDLASLWYRLNEEKLEWIVYVTD 407


>gi|81300386|ref|YP_400594.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81169267|gb|ABB57607.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 590

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/602 (45%), Positives = 376/602 (62%), Gaps = 47/602 (7%)

Query: 481  LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 538
            L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 14   LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 64

Query: 539  FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 595
              IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 65   RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 116

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 117  QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 174

Query: 656  QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 175  QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 234

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
               ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 235  ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 294

Query: 774  KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD GQ  H
Sbjct: 295  QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 354

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            F  + + A++AG L P   +++ V FG+V GED KK KTR+GDTV+L +LLDE + R+  
Sbjct: 355  FAQVFQVAQRAGWL-PAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRART 413

Query: 889  KLKDKNRHTEL--TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
             L  +    E   TP  +    QAV  G +KYADLS NRN +Y+FSFDKML  +GNTA Y
Sbjct: 414  DLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLALQGNTAPY 473

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVS--LEHEKEFALAKTLLRMNDVLMLVTRD 1004
            LLYAY RI  IAR  GI+       AQ  PV+  L    E +LAK +L++ +VL  V RD
Sbjct: 474  LLYAYVRIQGIARKGGIDF------AQLDPVAAVLTEPTERSLAKQVLQLGEVLDEVARD 527

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            L  + LC YL+++S  F++FYD C  +  +     +   T RLLL + TA+ +K    +L
Sbjct: 528  LLPNRLCSYLFELSQTFNQFYDRCPILNAE-----EPQRTSRLLLCDLTARTLKLGLSLL 582

Query: 1065 NI 1066
             I
Sbjct: 583  GI 584



 Score =  294 bits (752), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 172/417 (41%), Positives = 250/417 (59%), Gaps = 38/417 (9%)

Query: 91  LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 148
           L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 14  LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 64

Query: 149 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 205
             IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 65  RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 116

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
           QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 117 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 174

Query: 266 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 175 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 234

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
              ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 235 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 294

Query: 384 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
           + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD    + 
Sbjct: 295 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 354

Query: 439 VLQAIAEEEKKQGISSSSSSQ------TKGT-AKKMNVPVRDRMSVRDYLSDVFTHA 488
             Q     ++   + +++  +       +G   KK+     D + +RD L +    A
Sbjct: 355 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRA 411



 Score =  293 bits (749), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 166/366 (45%), Positives = 232/366 (63%), Gaps = 34/366 (9%)

Query: 1108 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 1165
            L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 14   LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 64

Query: 1166 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 1222
              IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 65   RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 116

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 117  QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 174

Query: 1283 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 175  QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 234

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
               ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 235  ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 294

Query: 1401 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH---RS 1452
            + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD      
Sbjct: 295  QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 354

Query: 1453 YHQVLQ 1458
            + QV Q
Sbjct: 355  FAQVFQ 360


>gi|22002514|gb|AAM82666.1| Syr [Synechococcus elongatus PCC 7942]
          Length = 584

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/602 (44%), Positives = 375/602 (62%), Gaps = 47/602 (7%)

Query: 481  LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 538
            L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 8    LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58

Query: 539  FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 595
              IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 59   RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111  QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168

Query: 656  QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 169  QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
               ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 229  ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288

Query: 774  KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD GQ  H
Sbjct: 289  QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            F  + + A++AG L P   +++ V FG+V GED KK KTR+GDTV+L +LLDE + R+  
Sbjct: 349  FAQVFQVAQRAGWL-PAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRART 407

Query: 889  KLKDKNRHTEL--TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
             L  +    E   TP  +    QAV  G +KYADLS NRN +Y+FSFDKML  +GNTA Y
Sbjct: 408  DLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLALQGNTAPY 467

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVS--LEHEKEFALAKTLLRMNDVLMLVTRD 1004
            LLYAY RI  IAR  GI+       AQ  PV+  L    E +LAK +L++ +VL  V RD
Sbjct: 468  LLYAYVRIQGIARKGGIDF------AQLDPVAAVLTEPTERSLAKQVLQLGEVLNEVARD 521

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            L  + LC YL+++S  F++FYD C  +  +     +   T RLL+ + T + +K    +L
Sbjct: 522  LLPNRLCSYLFELSQTFNQFYDRCPILNAE-----EPQRTSRLLVCDLTGRTLKLGLSLL 576

Query: 1065 NI 1066
             I
Sbjct: 577  GI 578



 Score =  294 bits (753), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 172/417 (41%), Positives = 250/417 (59%), Gaps = 38/417 (9%)

Query: 91  LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 148
           L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 8   LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58

Query: 149 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 205
             IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 59  RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
           QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168

Query: 266 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 169 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
              ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 229 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288

Query: 384 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
           + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD    + 
Sbjct: 289 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 439 VLQAIAEEEKKQGISSSSSSQ------TKGT-AKKMNVPVRDRMSVRDYLSDVFTHA 488
             Q     ++   + +++  +       +G   KK+     D + +RD L +    A
Sbjct: 349 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRA 405



 Score =  293 bits (750), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 166/366 (45%), Positives = 232/366 (63%), Gaps = 34/366 (9%)

Query: 1108 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 1165
            L D F  A+  +F PE        V +TN K    FGD+Q N AM+L K        + P
Sbjct: 8    LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58

Query: 1166 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 1222
              IA++        L  N +LA + +   +A PGF+N  L   Y   Q++ +  +   G+
Sbjct: 59   RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            QP  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111  QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168

Query: 1283 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            QFGMLIA LQ+++P  L++     I+DL AFYK++K RFDED  F++ A Q VV LQ  +
Sbjct: 169  QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
               ++AW+++CD SRR+FQKIYDRL++ L ERGESFY  ++  +V  L + GLL  D G 
Sbjct: 229  ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288

Query: 1401 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH---RS 1452
            + ++ E     +   +P+ + KSDGG+ Y T+DLAA+R R+ +++A  I+YVTD      
Sbjct: 289  QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 1453 YHQVLQ 1458
            + QV Q
Sbjct: 349  FAQVFQ 354


>gi|119487496|ref|ZP_01621106.1| arginyl-tRNA-synthetase [Lyngbya sp. PCC 8106]
 gi|119455665|gb|EAW36801.1| arginyl-tRNA-synthetase [Lyngbya sp. PCC 8106]
          Length = 585

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 268/606 (44%), Positives = 379/606 (62%), Gaps = 44/606 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            S  ++L   F HA+  AF +   G     V ++N K    FGD+QCN AM+L K  K   
Sbjct: 3    STVEHLRAKFDHAIVAAFGQEMAGTDPMLVPTSNPK----FGDYQCNVAMSLTKALK--- 55

Query: 534  EKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
               NP  IA Q I  +  S+L   P         E+A PGF+N+ L   Y   Q+ +I+ 
Sbjct: 56   --SNPRAIATQIIEKLEISDLCEPP---------EIAGPGFINLRLKPEYLEAQLNNILT 104

Query: 593  N---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            +   G+  PT++   +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+L  DV+RLNH
Sbjct: 105  DERLGI--PTVDNPQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFLDDDVLRLNH 162

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            VGDWGTQFGMLI +L++ +P+ LT +    I DL AFY+++K RFDED  FK+ + Q VV
Sbjct: 163  VGDWGTQFGMLITYLREVYPEALTTADALDIGDLVAFYRQAKVRFDEDNEFKEASRQEVV 222

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ    D ++AW ++C+ SRR+FQ IYD L++ L ERGESFY   + ++V  LEK GLL
Sbjct: 223  KLQAGAEDSRRAWTILCEQSRREFQVIYDLLDIQLKERGESFYNSFLSEVVKDLEKTGLL 282

Query: 768  ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
            E + G K ++      ++  ++P+ + KSDGG+ Y T+DLAA+R RI +++AD ++YVTD
Sbjct: 283  EENQGAKCVFLDGFQNKEGEALPLIVQKSDGGYNYATTDLAALRYRINQDQADRMIYVTD 342

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQ  HF  + + A+KAG + P++  +  V FG+VLGED KK KTRSG+TV+L +LLDE 
Sbjct: 343  SGQANHFTQVWQVARKAGWI-PDEVDVIHVPFGLVLGEDGKKLKTRSGETVRLRDLLDEA 401

Query: 883  LRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            + R+   L+ + +    T ++  +    Q V    +KYADLS NR  +YVFSFDKML  +
Sbjct: 402  INRARKDLETRLKEEGRTESKEFIENVAQVVGMSAVKYADLSQNRTSNYVFSFDKMLSLQ 461

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAY RI  I R   I   D +       + L+ E EF LAK LL++N+V+  
Sbjct: 462  GNTAPYLLYAYVRIQGIRRKGEI---DFKQVGTEAKMQLQEEAEFTLAKHLLQLNEVIET 518

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V  +L  + LC+YL+++S  F++FYD C  ++ +   +I      RL L + TA+ +K  
Sbjct: 519  VAIELLPNRLCQYLFELSQKFNQFYDQCPVLKAEDAQRI-----SRLGLCDLTARTLKLG 573

Query: 1061 FDILNI 1066
              +L I
Sbjct: 574  LSLLGI 579



 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 167/360 (46%), Positives = 233/360 (64%), Gaps = 33/360 (9%)

Query: 86  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           S  ++L   F HA+  AF +   G     V ++N K    FGD+QCN AM+L K  K   
Sbjct: 3   STVEHLRAKFDHAIVAAFGQEMAGTDPMLVPTSNPK----FGDYQCNVAMSLTKALK--- 55

Query: 144 EKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
              NP  IA Q I  +  S+L   P         E+A PGF+N+ L   Y   Q+ +I+ 
Sbjct: 56  --SNPRAIATQIIEKLEISDLCEPP---------EIAGPGFINLRLKPEYLEAQLNNILT 104

Query: 203 N---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
           +   G+  PT++   +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+L  DV+RLNH
Sbjct: 105 DERLGI--PTVDNPQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFLDDDVLRLNH 162

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 317
           VGDWGTQFGMLI +L++ +P+ LT +    I DL AFY+++K RFDED  FK+ + Q VV
Sbjct: 163 VGDWGTQFGMLITYLREVYPEALTTADALDIGDLVAFYRQAKVRFDEDNEFKEASRQEVV 222

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 377
            LQ    D ++AW ++C+ SRR+FQ IYD L++ L ERGESFY   + ++V  LEK GLL
Sbjct: 223 KLQAGAEDSRRAWTILCEQSRREFQVIYDLLDIQLKERGESFYNSFLSEVVKDLEKTGLL 282

Query: 378 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           E + G K ++      ++  ++P+ + KSDGG+ Y T+DLAA+R RI +++AD ++YVTD
Sbjct: 283 EENQGAKCVFLDGFQNKEGEALPLIVQKSDGGYNYATTDLAALRYRINQDQADRMIYVTD 342



 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 167/360 (46%), Positives = 233/360 (64%), Gaps = 33/360 (9%)

Query: 1103 SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            S  ++L   F HA+  AF +   G     V ++N K    FGD+QCN AM+L K  K   
Sbjct: 3    STVEHLRAKFDHAIVAAFGQEMAGTDPMLVPTSNPK----FGDYQCNVAMSLTKALK--- 55

Query: 1161 EKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
               NP  IA Q I  +  S+L   P         E+A PGF+N+ L   Y   Q+ +I+ 
Sbjct: 56   --SNPRAIATQIIEKLEISDLCEPP---------EIAGPGFINLRLKPEYLEAQLNNILT 104

Query: 1220 N---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            +   G+  PT++   +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+L  DV+RLNH
Sbjct: 105  DERLGI--PTVDNPQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFLDDDVLRLNH 162

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            VGDWGTQFGMLI +L++ +P+ LT +    I DL AFY+++K RFDED  FK+ + Q VV
Sbjct: 163  VGDWGTQFGMLITYLREVYPEALTTADALDIGDLVAFYRQAKVRFDEDNEFKEASRQEVV 222

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ    D ++AW ++C+ SRR+FQ IYD L++ L ERGESFY   + ++V  LEK GLL
Sbjct: 223  KLQAGAEDSRRAWTILCEQSRREFQVIYDLLDIQLKERGESFYNSFLSEVVKDLEKTGLL 282

Query: 1395 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            E + G K ++      ++  ++P+ + KSDGG+ Y T+DLAA+R RI +++AD ++YVTD
Sbjct: 283  EENQGAKCVFLDGFQNKEGEALPLIVQKSDGGYNYATTDLAALRYRINQDQADRMIYVTD 342


>gi|302854025|ref|XP_002958524.1| hypothetical protein VOLCADRAFT_108162 [Volvox carteri f.
            nagariensis]
 gi|300256171|gb|EFJ40444.1| hypothetical protein VOLCADRAFT_108162 [Volvox carteri f.
            nagariensis]
          Length = 656

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 272/665 (40%), Positives = 381/665 (57%), Gaps = 96/665 (14%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 534
            S+R+ L ++F  A+ V+FP +  +    A  N K     GD+QCN+AMAL  K+      
Sbjct: 10   SIRNELLELFRTALTVSFPSVSAEPVVAACNNAKN----GDYQCNNAMALFGKLKGTPSA 65

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             K P D+A +I   + +          +I +  +A PGF+N+ LSR     ++ +++V G
Sbjct: 66   PKAPRDVATAIVGALPAN--------GLIAETSLAGPGFINIRLSRDSLSTRLSEMLVKG 117

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            +    PT     +V++DFSSPN+AKEMHVGHLRSTIIGDT+ R+ EY G DV+RLNHVGD
Sbjct: 118  LASWAPTGYIGKKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRIFEYCGADVLRLNHVGD 177

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPP-------IADLQAFYKESKKRFDEDEIFKKRAYQC 705
            WGTQFGMLI H+ D     +            +ADLQ  Y+ +KKRFDE+E FK RA + 
Sbjct: 178  WGTQFGMLIEHMADARRLRVAAGGEDKDMDEDVADLQELYRAAKKRFDEEEEFKTRAREA 237

Query: 706  VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 765
            V  LQ  DP+   +W+ IC  SRR+F+ IY RL VTL ERGESFY   ++ +V  L+  G
Sbjct: 238  VTRLQSGDPESLASWQRICAASRREFEAIYSRLGVTLQERGESFYNPMLKDVVEELKAAG 297

Query: 766  LLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQ 825
            +  +D+G   ++ E + S+P+ + KSDGGF Y ++D+AAI+ R+ EEKADWI+YVTD+GQ
Sbjct: 298  VATIDNGAACVFVEGQ-SVPLIVQKSDGGFGYASTDMAAIKHRLNEEKADWIIYVTDVGQ 356

Query: 826  GVHFRLLEECAKKAG-ILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
              HF L+   AKKAG +++ +  ++  VGFG+VLGED K+F+TRSGD V+L ELLDE   
Sbjct: 357  SQHFELVFAAAKKAGWLVDGSGPKVSHVGFGLVLGEDGKRFRTRSGDLVRLVELLDEAKS 416

Query: 885  RSLDKLKDKNRHT--ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            R    ++++      E+   E+ +A  A+ YG +KYADL ++R  +Y FSFD+ML+ +GN
Sbjct: 417  RCAATIRERRAEAGEEVNEAEVEDAACAMGYGAVKYADLKNHRTTNYKFSFDEMLNLKGN 476

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK------------------- 983
            TAVYLLYA+ RIA I R A    +D+   A  TP+SL+H K                   
Sbjct: 477  TAVYLLYAHARIAGIVRKA---DKDVYALAADTPISLDHPKHLYPSPSLFWPSHATVTAT 533

Query: 984  -------EFALAKTLLRMNDVL------------------MLVTRDLCLHHL-------- 1010
                   E  LA  L ++ + L                   LV     L+ L        
Sbjct: 534  YFSPRLQELELALHLCKLPEALEDAIEELAPNRRVDVAFRNLVPTGFTLNALDLPLRATH 593

Query: 1011 --------CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
                     +YLYD+S  F+ FY +C  +  + E         RLLL EATA VM+KCF+
Sbjct: 594  YRSIKLRVTDYLYDLSEKFNSFYVDCKVLGSEQEAS-------RLLLCEATAVVMRKCFE 646

Query: 1063 ILNIR 1067
            +L IR
Sbjct: 647  LLGIR 651



 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 160/357 (44%), Positives = 224/357 (62%), Gaps = 23/357 (6%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 144
           S+R+ L ++F  A+ V+FP +  +    A  N K     GD+QCN+AMAL  K+      
Sbjct: 10  SIRNELLELFRTALTVSFPSVSAEPVVAACNNAKN----GDYQCNNAMALFGKLKGTPSA 65

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            K P D+A +I   + +          +I +  +A PGF+N+ LSR     ++ +++V G
Sbjct: 66  PKAPRDVATAIVGALPAN--------GLIAETSLAGPGFINIRLSRDSLSTRLSEMLVKG 117

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           +    PT     +V++DFSSPN+AKEMHVGHLRSTIIGDT+ R+ EY G DV+RLNHVGD
Sbjct: 118 LASWAPTGYIGKKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRIFEYCGADVLRLNHVGD 177

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPP-------IADLQAFYKESKKRFDEDEIFKKRAYQC 315
           WGTQFGMLI H+ D     +            +ADLQ  Y+ +KKRFDE+E FK RA + 
Sbjct: 178 WGTQFGMLIEHMADARRLRVAAGGEDKDMDEDVADLQELYRAAKKRFDEEEEFKTRAREA 237

Query: 316 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 375
           V  LQ  DP+   +W+ IC  SRR+F+ IY RL VTL ERGESFY   ++ +V  L+  G
Sbjct: 238 VTRLQSGDPESLASWQRICAASRREFEAIYSRLGVTLQERGESFYNPMLKDVVEELKAAG 297

Query: 376 LLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +  +D+G   ++ E + S+P+ + KSDGGF Y ++D+AAI+ R+ EEKADWI+YVTD
Sbjct: 298 VATIDNGAACVFVEGQ-SVPLIVQKSDGGFGYASTDMAAIKHRLNEEKADWIIYVTD 353



 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 160/357 (44%), Positives = 224/357 (62%), Gaps = 23/357 (6%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 1161
            S+R+ L ++F  A+ V+FP +  +    A  N K     GD+QCN+AMAL  K+      
Sbjct: 10   SIRNELLELFRTALTVSFPSVSAEPVVAACNNAKN----GDYQCNNAMALFGKLKGTPSA 65

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             K P D+A +I   + +          +I +  +A PGF+N+ LSR     ++ +++V G
Sbjct: 66   PKAPRDVATAIVGALPAN--------GLIAETSLAGPGFINIRLSRDSLSTRLSEMLVKG 117

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            +    PT     +V++DFSSPN+AKEMHVGHLRSTIIGDT+ R+ EY G DV+RLNHVGD
Sbjct: 118  LASWAPTGYIGKKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRIFEYCGADVLRLNHVGD 177

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPP-------IADLQAFYKESKKRFDEDEIFKKRAYQC 1332
            WGTQFGMLI H+ D     +            +ADLQ  Y+ +KKRFDE+E FK RA + 
Sbjct: 178  WGTQFGMLIEHMADARRLRVAAGGEDKDMDEDVADLQELYRAAKKRFDEEEEFKTRAREA 237

Query: 1333 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 1392
            V  LQ  DP+   +W+ IC  SRR+F+ IY RL VTL ERGESFY   ++ +V  L+  G
Sbjct: 238  VTRLQSGDPESLASWQRICAASRREFEAIYSRLGVTLQERGESFYNPMLKDVVEELKAAG 297

Query: 1393 LLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +  +D+G   ++ E + S+P+ + KSDGGF Y ++D+AAI+ R+ EEKADWI+YVTD
Sbjct: 298  VATIDNGAACVFVEGQ-SVPLIVQKSDGGFGYASTDMAAIKHRLNEEKADWIIYVTD 353


>gi|429329418|gb|AFZ81177.1| arginyl-tRNA synthetase, putative [Babesia equi]
          Length = 584

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/561 (44%), Positives = 357/561 (63%), Gaps = 27/561 (4%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q NDA++L K+ KD     +P ++A         EL            + V+  G
Sbjct: 40   KFGDYQWNDALSLFKLAKDSLTVGSPKELA---------ELVKENIEKTAFSSVNVSPQG 90

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+    S+ +  E+IK + +NGV+P  L   ++V +DFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 91   FLTFVFSKEWIEEEIKSLAINGVKPSKLLNGVKVGIDFSSPNIAKEMHVGHLRSTIIGDS 150

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            I+R+LE+ G++V R+NH+GDWGTQFGMLI ++ +K+PD+LT  P I+DL  FYKE+K R 
Sbjct: 151  IARILEFHGYEVFRINHLGDWGTQFGMLIEYMYEKYPDFLTSMPSISDLTKFYKEAKLRM 210

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 752
            D DE FKK++   VV LQ  D D +  W++ICD+S   F +IY RL++     GESFY  
Sbjct: 211  DTDEEFKKKSRSRVVKLQSGDKDSRMVWKVICDLSMEAFNEIYKRLDIKFEVYGESFYND 270

Query: 753  HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 812
             +  +V  L++KG+ E   G  +++  D    P+ +VKSDGG+ YDT+D+A IR RI+E 
Sbjct: 271  FIPDVVKELKEKGIAEDSQGAIVVF-TDVSPAPLMLVKSDGGYGYDTTDMACIRYRIQEL 329

Query: 813  KADWIVYVTDLGQGVHFRLLEECAKKAGILN--PNKTRMDFVGFGVVLGEDRKKFKTRSG 870
            K DW++YVTD+GQ  HF  + + A+ AG  +    + R+D VGFG++L +  +KFKTRSG
Sbjct: 330  KCDWVIYVTDVGQAEHFAKIFKAARDAGWADHENKRVRLDHVGFGMILNDFGEKFKTRSG 389

Query: 871  DTVKLSELLDEGLRRS---LDK-LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRN 926
            +TVKL +LLD  + R+   L+K L+++        ++L    + + YG +KY DL+ +  
Sbjct: 390  ETVKLVDLLDVAVERASAELEKRLQNQTEDDLDAQSDLKGVSETLGYGAVKYYDLNRSIL 449

Query: 927  LDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFA 986
             +Y FSFD MLD RGNTAVYLLYAY RI +I R +GIN E+L ++A    +S+ H  E A
Sbjct: 450  SNYKFSFDSMLDPRGNTAVYLLYAYARICAIFRKSGINFEELDISA----LSVSHTTEIA 505

Query: 987  LAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGR 1046
            LAK +L+   VL  + +DL ++ L EYLYDIS  FS FY  C  +  D+E         R
Sbjct: 506  LAKCILKFPAVLDTILKDLAVNRLTEYLYDISCQFSAFYTQCKVV-GDSE------QNSR 558

Query: 1047 LLLAEATAKVMKKCFDILNIR 1067
            L+L   T  +MK CF+++ I+
Sbjct: 559  LILCHCTRMIMKTCFNLIGIK 579



 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 145/310 (46%), Positives = 204/310 (65%), Gaps = 10/310 (3%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q NDA++L K+ KD     +P ++A         EL            + V+  G
Sbjct: 40  KFGDYQWNDALSLFKLAKDSLTVGSPKELA---------ELVKENIEKTAFSSVNVSPQG 90

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+    S+ +  E+IK + +NGV+P  L   ++V +DFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 91  FLTFVFSKEWIEEEIKSLAINGVKPSKLLNGVKVGIDFSSPNIAKEMHVGHLRSTIIGDS 150

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           I+R+LE+ G++V R+NH+GDWGTQFGMLI ++ +K+PD+LT  P I+DL  FYKE+K R 
Sbjct: 151 IARILEFHGYEVFRINHLGDWGTQFGMLIEYMYEKYPDFLTSMPSISDLTKFYKEAKLRM 210

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
           D DE FKK++   VV LQ  D D +  W++ICD+S   F +IY RL++     GESFY  
Sbjct: 211 DTDEEFKKKSRSRVVKLQSGDKDSRMVWKVICDLSMEAFNEIYKRLDIKFEVYGESFYND 270

Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
            +  +V  L++KG+ E   G  +++  D    P+ +VKSDGG+ YDT+D+A IR RI+E 
Sbjct: 271 FIPDVVKELKEKGIAEDSQGAIVVF-TDVSPAPLMLVKSDGGYGYDTTDMACIRYRIQEL 329

Query: 423 KADWIVYVTD 432
           K DW++YVTD
Sbjct: 330 KCDWVIYVTD 339



 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 145/310 (46%), Positives = 204/310 (65%), Gaps = 10/310 (3%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q NDA++L K+ KD     +P ++A         EL            + V+  G
Sbjct: 40   KFGDYQWNDALSLFKLAKDSLTVGSPKELA---------ELVKENIEKTAFSSVNVSPQG 90

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+    S+ +  E+IK + +NGV+P  L   ++V +DFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 91   FLTFVFSKEWIEEEIKSLAINGVKPSKLLNGVKVGIDFSSPNIAKEMHVGHLRSTIIGDS 150

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            I+R+LE+ G++V R+NH+GDWGTQFGMLI ++ +K+PD+LT  P I+DL  FYKE+K R 
Sbjct: 151  IARILEFHGYEVFRINHLGDWGTQFGMLIEYMYEKYPDFLTSMPSISDLTKFYKEAKLRM 210

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 1379
            D DE FKK++   VV LQ  D D +  W++ICD+S   F +IY RL++     GESFY  
Sbjct: 211  DTDEEFKKKSRSRVVKLQSGDKDSRMVWKVICDLSMEAFNEIYKRLDIKFEVYGESFYND 270

Query: 1380 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 1439
             +  +V  L++KG+ E   G  +++  D    P+ +VKSDGG+ YDT+D+A IR RI+E 
Sbjct: 271  FIPDVVKELKEKGIAEDSQGAIVVF-TDVSPAPLMLVKSDGGYGYDTTDMACIRYRIQEL 329

Query: 1440 KADWIVYVTD 1449
            K DW++YVTD
Sbjct: 330  KCDWVIYVTD 339


>gi|9757672|dbj|BAB08191.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 605

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 259/603 (42%), Positives = 367/603 (60%), Gaps = 39/603 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 534
            SV   L  + T +++   P+L      V    E     FGD+QCN+AM++  +I      
Sbjct: 24   SVEQQLCTLITSSLRATVPDL-----DVEPMLEVSKPGFGDYQCNNAMSVFSRIRGSATN 78

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             +NP  + Q+IA+        N   + +I+ I VA PG++N+ LS  +  ++I+D++V G
Sbjct: 79   FRNPMAVGQAIAN--------NLPQSNIIESISVAGPGYINITLSSNWIAQRIQDMLVCG 130

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            ++   P L  K R ++DFSSPNIAKEMHVGH+RSTIIGDT++ + E+   +V+R NHVGD
Sbjct: 131  IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGD 189

Query: 653  WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            WGTQFGMLI  L ++FPD+    +  + DLQ+FYK SKKRFD+D  FK+RA Q VV LQ 
Sbjct: 190  WGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDFKERARQAVVRLQG 249

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             +  Y+ AW+ IC +SR +F  +Y RLNV L E+GESFY  ++  ++  L  KGL+    
Sbjct: 250  GEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESFYNPYIPPVLEELTNKGLIVESK 309

Query: 772  GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            G ++++ ED    P+ ++K DGGF Y ++DLAA+  R+  EKA+WI+YVTD+GQ  HF +
Sbjct: 310  GARVIFVEDH---PLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQRHFHM 366

Query: 832  LEECAKKAGIL---NPNK-TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS- 886
            L   AK AG L   N  K  +   VGFG+VLG D K+F+TR  + V+L +LLDE   RS 
Sbjct: 367  LFTAAKMAGWLPEQNGKKYPKASHVGFGLVLGSDGKRFRTRCSEVVRLVDLLDEAKARSK 426

Query: 887  ---LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
               + +     +  + T  EL    +A+ YG +KY+DL +NR  DY FSFD+ML D+GNT
Sbjct: 427  AQLIKRFTGNGQIADWTDDELDRTSEAIGYGAVKYSDLKNNRLTDYTFSFDQMLSDKGNT 486

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            AVYL YA+ RI SI R A  + E L++      ++L H  E  L   L++  +V+     
Sbjct: 487  AVYLQYAHARICSIIRKASKDVEKLKMTG---AITLGHPYERFLGLHLIQFTEVVEQACA 543

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            DL  H LC+YLY +S  FS+FY NC  +    E       T RLLL EAT  +M++CF +
Sbjct: 544  DLQPHRLCDYLYSLSLTFSKFYTNCQVVGSPEE-------TSRLLLCEATGIIMRQCFHL 596

Query: 1064 LNI 1066
            L I
Sbjct: 597  LGI 599



 Score =  296 bits (757), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 157/364 (43%), Positives = 229/364 (62%), Gaps = 24/364 (6%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 144
           SV   L  + T +++   P+L      V    E     FGD+QCN+AM++  +I      
Sbjct: 24  SVEQQLCTLITSSLRATVPDL-----DVEPMLEVSKPGFGDYQCNNAMSVFSRIRGSATN 78

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            +NP  + Q+IA+        N   + +I+ I VA PG++N+ LS  +  ++I+D++V G
Sbjct: 79  FRNPMAVGQAIAN--------NLPQSNIIESISVAGPGYINITLSSNWIAQRIQDMLVCG 130

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           ++   P L  K R ++DFSSPNIAKEMHVGH+RSTIIGDT++ + E+   +V+R NHVGD
Sbjct: 131 IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGD 189

Query: 263 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           WGTQFGMLI  L ++FPD+    +  + DLQ+FYK SKKRFD+D  FK+RA Q VV LQ 
Sbjct: 190 WGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDFKERARQAVVRLQG 249

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            +  Y+ AW+ IC +SR +F  +Y RLNV L E+GESFY  ++  ++  L  KGL+    
Sbjct: 250 GEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESFYNPYIPPVLEELTNKGLIVESK 309

Query: 382 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQ 438
           G ++++ ED    P+ ++K DGGF Y ++DLAA+  R+  EKA+WI+YVTD    R +H 
Sbjct: 310 GARVIFVEDH---PLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQRHFHM 366

Query: 439 VLQA 442
           +  A
Sbjct: 367 LFTA 370



 Score =  295 bits (754), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 156/362 (43%), Positives = 228/362 (62%), Gaps = 24/362 (6%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 1161
            SV   L  + T +++   P+L      V    E     FGD+QCN+AM++  +I      
Sbjct: 24   SVEQQLCTLITSSLRATVPDL-----DVEPMLEVSKPGFGDYQCNNAMSVFSRIRGSATN 78

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             +NP  + Q+IA+        N   + +I+ I VA PG++N+ LS  +  ++I+D++V G
Sbjct: 79   FRNPMAVGQAIAN--------NLPQSNIIESISVAGPGYINITLSSNWIAQRIQDMLVCG 130

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            ++   P L  K R ++DFSSPNIAKEMHVGH+RSTIIGDT++ + E+   +V+R NHVGD
Sbjct: 131  IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGD 189

Query: 1280 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            WGTQFGMLI  L ++FPD+    +  + DLQ+FYK SKKRFD+D  FK+RA Q VV LQ 
Sbjct: 190  WGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDFKERARQAVVRLQG 249

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +  Y+ AW+ IC +SR +F  +Y RLNV L E+GESFY  ++  ++  L  KGL+    
Sbjct: 250  GEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESFYNPYIPPVLEELTNKGLIVESK 309

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQ 1455
            G ++++ ED    P+ ++K DGGF Y ++DLAA+  R+  EKA+WI+YVTD    R +H 
Sbjct: 310  GARVIFVEDH---PLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQRHFHM 366

Query: 1456 VL 1457
            + 
Sbjct: 367  LF 368


>gi|427725331|ref|YP_007072608.1| arginyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
 gi|427357051|gb|AFY39774.1| arginyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
          Length = 585

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/567 (46%), Positives = 369/567 (65%), Gaps = 38/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 571
            KFGD+Q N A++L KI K     KNP  IAQ I   +  ++L   P+         +A P
Sbjct: 38   KFGDYQSNVALSLTKILK-----KNPRVIAQEIIDALDVADLCEAPT---------IAGP 83

Query: 572  GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            GF+N  L   Y    +K++  +   G+   T  +K  V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINFTLKPSYLEILLKELQQSDRLGIDKTTDPQK--VIVDFSSPNIAKEMHVGHLRSTI 141

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 686
            IGD+I+R+LE+ G DVVRLNHVGDWGTQFGMLI +L++ +PD LT++    I DL AFYK
Sbjct: 142  IGDSIARVLEFRGQDVVRLNHVGDWGTQFGMLITYLREAYPDALTQADALDIGDLVAFYK 201

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 746
            ++K RFD+DE FK+ + + VVALQ  D +  +AW+++CD SRR+FQKIYD L++ +TERG
Sbjct: 202  KAKIRFDDDEEFKENSRKQVVALQSGDEESNQAWQLLCDQSRREFQKIYDILDIKITERG 261

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
            ESFY  ++  +V  L+K GLLE D G + ++ E     D   +P+ + KSDGGF Y T+D
Sbjct: 262  ESFYNPYLADVVTDLKKVGLLEKDAGAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTD 321

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAAIR RI+E+ A+ IVYVTD GQ  HF  + + AK+A  L  +   +  V FG+V GED
Sbjct: 322  LAAIRYRIKEDGAERIVYVTDSGQAGHFAQVFQVAKRAEFLTDDVEAV-HVPFGLVQGED 380

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRH--TELTPTELSEAQQAVAYGCIKYA 919
             KK KTRSG+T+KL +LL+E + RS   ++ + +   ++ +P  + +  + V  G +KYA
Sbjct: 381  GKKLKTRSGETIKLKDLLNEAVVRSRADIEKRLQEYDSQESPEFIEQVAKVVGIGAVKYA 440

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  +Y+FSFDKML  +GNTA Y+LYAY R+  ++R  GI   DL      TP+ L
Sbjct: 441  DLSQNRTSNYIFSFDKMLTLQGNTAPYMLYAYVRVQGVSRQGGI---DLANLPTDTPIIL 497

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
                E  LAK + ++ +VL +V R+L  + LCEYLY++S  F++FY+ C  ++  AEG  
Sbjct: 498  SEPAELTLAKHIFQLGEVLEVVERELMPNRLCEYLYELSRKFNQFYEACPILK--AEGDR 555

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +   T RL+LA+ TA+ +K    +L I
Sbjct: 556  R---TSRLILADTTARTLKLGLSLLGI 579



 Score =  299 bits (766), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 168/339 (49%), Positives = 224/339 (66%), Gaps = 30/339 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 181
           KFGD+Q N A++L KI K     KNP  IAQ I   +  ++L   P+         +A P
Sbjct: 38  KFGDYQSNVALSLTKILK-----KNPRVIAQEIIDALDVADLCEAPT---------IAGP 83

Query: 182 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           GF+N  L   Y    +K++  +   G+   T  +K  V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84  GFINFTLKPSYLEILLKELQQSDRLGIDKTTDPQK--VIVDFSSPNIAKEMHVGHLRSTI 141

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 296
           IGD+I+R+LE+ G DVVRLNHVGDWGTQFGMLI +L++ +PD LT++    I DL AFYK
Sbjct: 142 IGDSIARVLEFRGQDVVRLNHVGDWGTQFGMLITYLREAYPDALTQADALDIGDLVAFYK 201

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 356
           ++K RFD+DE FK+ + + VVALQ  D +  +AW+++CD SRR+FQKIYD L++ +TERG
Sbjct: 202 KAKIRFDDDEEFKENSRKQVVALQSGDEESNQAWQLLCDQSRREFQKIYDILDIKITERG 261

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
           ESFY  ++  +V  L+K GLLE D G + ++ E     D   +P+ + KSDGGF Y T+D
Sbjct: 262 ESFYNPYLADVVTDLKKVGLLEKDAGAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTD 321

Query: 412 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQAIAEEE 447
           LAAIR RI+E+ A+ IVYVTD      + QV Q     E
Sbjct: 322 LAAIRYRIKEDGAERIVYVTDSGQAGHFAQVFQVAKRAE 360



 Score =  299 bits (766), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 167/333 (50%), Positives = 223/333 (66%), Gaps = 30/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 1198
            KFGD+Q N A++L KI K     KNP  IAQ I   +  ++L   P+         +A P
Sbjct: 38   KFGDYQSNVALSLTKILK-----KNPRVIAQEIIDALDVADLCEAPT---------IAGP 83

Query: 1199 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            GF+N  L   Y    +K++  +   G+   T  +K  V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINFTLKPSYLEILLKELQQSDRLGIDKTTDPQK--VIVDFSSPNIAKEMHVGHLRSTI 141

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 1313
            IGD+I+R+LE+ G DVVRLNHVGDWGTQFGMLI +L++ +PD LT++    I DL AFYK
Sbjct: 142  IGDSIARVLEFRGQDVVRLNHVGDWGTQFGMLITYLREAYPDALTQADALDIGDLVAFYK 201

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
            ++K RFD+DE FK+ + + VVALQ  D +  +AW+++CD SRR+FQKIYD L++ +TERG
Sbjct: 202  KAKIRFDDDEEFKENSRKQVVALQSGDEESNQAWQLLCDQSRREFQKIYDILDIKITERG 261

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
            ESFY  ++  +V  L+K GLLE D G + ++ E     D   +P+ + KSDGGF Y T+D
Sbjct: 262  ESFYNPYLADVVTDLKKVGLLEKDAGAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTD 321

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            LAAIR RI+E+ A+ IVYVTD      + QV Q
Sbjct: 322  LAAIRYRIKEDGAERIVYVTDSGQAGHFAQVFQ 354


>gi|443315321|ref|ZP_21044818.1| arginyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
 gi|442785082|gb|ELR94925.1| arginyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
          Length = 585

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/570 (46%), Positives = 350/570 (61%), Gaps = 44/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI-ASVVTSELATNPSLAKVIDKIEVAKP 571
            KFGDFQ N AMAL K  KDK     P  IA+ I A +  ++L   P         E+A P
Sbjct: 38   KFGDFQANGAMALAKRLKDK-----PRAIAEKIVAHLEVTDLCEPP---------EIAGP 83

Query: 572  GFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 625
            GF+N+ L   Y   Q+  +       V  V  P      +V+VDFSSPNIAKEMHVGHLR
Sbjct: 84   GFINLRLKATYIEAQLNALTGDERLGVAAVAQPQ-----KVIVDFSSPNIAKEMHVGHLR 138

Query: 626  STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQA 683
            STIIGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI HLQ   P+ LT      I DL  
Sbjct: 139  STIIGDSIARVLEFAGHDVLRLNHVGDWGTQFGMLITHLQTACPEALTSGGNVDIGDLVT 198

Query: 684  FYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLT 743
            FYK++K+RFD+DE FK R+ + VVALQ  D   + AW  +C+ SR+ FQ +YDRL++ LT
Sbjct: 199  FYKQAKERFDQDEDFKARSREAVVALQSGDATARAAWTALCNQSRKAFQTLYDRLDICLT 258

Query: 744  ERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYD 798
            ERGESFY   +  +V  L  +GLL  D G ++++ E     +   +P+ I KSDGGF Y 
Sbjct: 259  ERGESFYNPFLADVVQELAAQGLLVADQGAQVVFLEGFSNKEGDPLPLIIQKSDGGFNYA 318

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+DLAAIR R +E+ A  I+YV D GQG HF  + + A +AG + P    +  V FGVV 
Sbjct: 319  TTDLAAIRYRTQEDGAQRILYVVDAGQGNHFAQVFQVAARAGWI-PEGVELTHVPFGVVQ 377

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCI 916
            GED KKFKTRSG+TV+L +LLDE + RS   L+ + +      TE  +    + V  G +
Sbjct: 378  GEDGKKFKTRSGETVRLKDLLDEAVTRSRVDLETRIQTEGREETEEFIQTVAETVGIGAV 437

Query: 917  KYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP 976
            KYADLS NR  +Y+FS+DKML  +GNTA YLLYAY R+  I+R   I   DL        
Sbjct: 438  KYADLSQNRTSNYIFSYDKMLALQGNTAPYLLYAYVRVQGISRKGTI---DLSQLGTDAA 494

Query: 977  VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE 1036
            V L  + EF LAK LL++++V+  V RDL    LC+YL+++S  F++FYD C  ++ +  
Sbjct: 495  VHLGDDSEFTLAKHLLQLDEVVAEVARDLLPSRLCQYLFELSQKFNQFYDRCSVLQAEEP 554

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             +     T RL+L + TA+ +K    +L I
Sbjct: 555  QR-----TSRLILCDLTARTLKLGLSLLGI 579



 Score =  297 bits (760), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 165/339 (48%), Positives = 210/339 (61%), Gaps = 36/339 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI-ASVVTSELATNPSLAKVIDKIEVAKP 181
           KFGDFQ N AMAL K  KDK     P  IA+ I A +  ++L   P         E+A P
Sbjct: 38  KFGDFQANGAMALAKRLKDK-----PRAIAEKIVAHLEVTDLCEPP---------EIAGP 83

Query: 182 GFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 235
           GF+N+ L   Y   Q+  +       V  V  P      +V+VDFSSPNIAKEMHVGHLR
Sbjct: 84  GFINLRLKATYIEAQLNALTGDERLGVAAVAQPQ-----KVIVDFSSPNIAKEMHVGHLR 138

Query: 236 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQA 293
           STIIGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI HLQ   P+ LT      I DL  
Sbjct: 139 STIIGDSIARVLEFAGHDVLRLNHVGDWGTQFGMLITHLQTACPEALTSGGNVDIGDLVT 198

Query: 294 FYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLT 353
           FYK++K+RFD+DE FK R+ + VVALQ  D   + AW  +C+ SR+ FQ +YDRL++ LT
Sbjct: 199 FYKQAKERFDQDEDFKARSREAVVALQSGDATARAAWTALCNQSRKAFQTLYDRLDICLT 258

Query: 354 ERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYD 408
           ERGESFY   +  +V  L  +GLL  D G ++++ E     +   +P+ I KSDGGF Y 
Sbjct: 259 ERGESFYNPFLADVVQELAAQGLLVADQGAQVVFLEGFSNKEGDPLPLIIQKSDGGFNYA 318

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDH---RSYHQVLQAIA 444
           T+DLAAIR R +E+ A  I+YV D      + QV Q  A
Sbjct: 319 TTDLAAIRYRTQEDGAQRILYVVDAGQGNHFAQVFQVAA 357



 Score =  296 bits (757), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 164/336 (48%), Positives = 209/336 (62%), Gaps = 36/336 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI-ASVVTSELATNPSLAKVIDKIEVAKP 1198
            KFGDFQ N AMAL K  KDK     P  IA+ I A +  ++L   P         E+A P
Sbjct: 38   KFGDFQANGAMALAKRLKDK-----PRAIAEKIVAHLEVTDLCEPP---------EIAGP 83

Query: 1199 GFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 1252
            GF+N+ L   Y   Q+  +       V  V  P      +V+VDFSSPNIAKEMHVGHLR
Sbjct: 84   GFINLRLKATYIEAQLNALTGDERLGVAAVAQPQ-----KVIVDFSSPNIAKEMHVGHLR 138

Query: 1253 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQA 1310
            STIIGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI HLQ   P+ LT      I DL  
Sbjct: 139  STIIGDSIARVLEFAGHDVLRLNHVGDWGTQFGMLITHLQTACPEALTSGGNVDIGDLVT 198

Query: 1311 FYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLT 1370
            FYK++K+RFD+DE FK R+ + VVALQ  D   + AW  +C+ SR+ FQ +YDRL++ LT
Sbjct: 199  FYKQAKERFDQDEDFKARSREAVVALQSGDATARAAWTALCNQSRKAFQTLYDRLDICLT 258

Query: 1371 ERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYD 1425
            ERGESFY   +  +V  L  +GLL  D G ++++ E     +   +P+ I KSDGGF Y 
Sbjct: 259  ERGESFYNPFLADVVQELAAQGLLVADQGAQVVFLEGFSNKEGDPLPLIIQKSDGGFNYA 318

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDH---RSYHQVLQ 1458
            T+DLAAIR R +E+ A  I+YV D      + QV Q
Sbjct: 319  TTDLAAIRYRTQEDGAQRILYVVDAGQGNHFAQVFQ 354


>gi|126656792|ref|ZP_01728006.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126622012|gb|EAZ92720.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 585

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/603 (43%), Positives = 376/603 (62%), Gaps = 38/603 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+ + L   F  A+  +F E   +     +T     H  GD+Q N A+ L K        
Sbjct: 3    SINEQLIQGFQEALVKSFGEEFKEIDPQVTTARDLRH--GDYQANIALPLAKKLG----- 55

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN-- 593
            KNP +IAQ I +        N SL  + +   +  PGF+N+ L   Y   Q+  +  N  
Sbjct: 56   KNPREIAQIIIN--------NLSLNNICESPTIGGPGFINLRLKSSYLESQLTSLYQNQR 107

Query: 594  -GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
             G++   +    +V+VDFSSPNIAKEMHVGHLRSTIIGD I+R LE+LG+DV+RLNHVGD
Sbjct: 108  LGIK--KVENADKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYDVLRLNHVGD 165

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            WGTQFGMLI +L++ +PD LTK+    I DL  FYK++KKRFDED  F++ A   VV LQ
Sbjct: 166  WGTQFGMLITYLKEVYPDALTKADALEIGDLVNFYKQAKKRFDEDPKFQEAARDAVVKLQ 225

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              D +  +AW+++CD SRR+FQKIYDRLNV LTERGESFY  +++ ++  L+K+G+LE D
Sbjct: 226  SGDKESLQAWQLLCDQSRREFQKIYDRLNVQLTERGESFYNPYLDDVIKALDKQGILEKD 285

Query: 771  DGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQ 825
             G + ++ E   +     +P+ + KSDGG+ Y T+DLAA+R RI+E+KA  I+YVTD GQ
Sbjct: 286  QGAQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDLAALRYRIKEDKAKRIIYVTDAGQ 345

Query: 826  GVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRR 885
              HF  + + A+KA  L P+   +  V FG+V GED KK KTRSG+TVKL +LLDE +  
Sbjct: 346  SNHFAQVFQVAEKANFL-PDTVEVTHVPFGLVKGEDGKKLKTRSGETVKLKDLLDEAVNY 404

Query: 886  SLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
            +   L+++ +  E   +   ++   + V    +KYADLS NR  DY+FS+DKML  +GNT
Sbjct: 405  ARKDLENRLQSEERQESAAFINHVSETVGISAVKYADLSQNRISDYIFSYDKMLALQGNT 464

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+LYAY RI SI+R   I+ E+L    ++  + L+ E E  L K LL++++ +  V +
Sbjct: 465  APYMLYAYARIQSISREGNIDYENL---GENITILLKEETEIELGKYLLQLSETIKEVEK 521

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
             L  + LC+YLY++S  F+ FY+NC  ++ D     + V T RLLL + TA+ +K    +
Sbjct: 522  TLLPNRLCDYLYELSKKFNRFYENCPVLKSD-----EPVKTSRLLLCDLTARTLKLGLSL 576

Query: 1064 LNI 1066
            L I
Sbjct: 577  LGI 579



 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 169/373 (45%), Positives = 232/373 (62%), Gaps = 27/373 (7%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           S+ + L   F  A+  +F E   +     +T     H  GD+Q N A+ L K        
Sbjct: 3   SINEQLIQGFQEALVKSFGEEFKEIDPQVTTARDLRH--GDYQANIALPLAKKLG----- 55

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN-- 203
           KNP +IAQ I +        N SL  + +   +  PGF+N+ L   Y   Q+  +  N  
Sbjct: 56  KNPREIAQIIIN--------NLSLNNICESPTIGGPGFINLRLKSSYLESQLTSLYQNQR 107

Query: 204 -GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
            G++   +    +V+VDFSSPNIAKEMHVGHLRSTIIGD I+R LE+LG+DV+RLNHVGD
Sbjct: 108 LGIK--KVENADKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYDVLRLNHVGD 165

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           WGTQFGMLI +L++ +PD LTK+    I DL  FYK++KKRFDED  F++ A   VV LQ
Sbjct: 166 WGTQFGMLITYLKEVYPDALTKADALEIGDLVNFYKQAKKRFDEDPKFQEAARDAVVKLQ 225

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             D +  +AW+++CD SRR+FQKIYDRLNV LTERGESFY  +++ ++  L+K+G+LE D
Sbjct: 226 SGDKESLQAWQLLCDQSRREFQKIYDRLNVQLTERGESFYNPYLDDVIKALDKQGILEKD 285

Query: 381 DGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRS 435
            G + ++ E   +     +P+ + KSDGG+ Y T+DLAA+R RI+E+KA  I+YVTD   
Sbjct: 286 QGAQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDLAALRYRIKEDKAKRIIYVTDAGQ 345

Query: 436 YHQVLQAIAEEEK 448
            +   Q     EK
Sbjct: 346 SNHFAQVFQVAEK 358



 Score =  301 bits (771), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 169/369 (45%), Positives = 232/369 (62%), Gaps = 30/369 (8%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+ + L   F  A+  +F E   +     +T     H  GD+Q N A+ L K        
Sbjct: 3    SINEQLIQGFQEALVKSFGEEFKEIDPQVTTARDLRH--GDYQANIALPLAKKLG----- 55

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN-- 1220
            KNP +IAQ I +        N SL  + +   +  PGF+N+ L   Y   Q+  +  N  
Sbjct: 56   KNPREIAQIIIN--------NLSLNNICESPTIGGPGFINLRLKSSYLESQLTSLYQNQR 107

Query: 1221 -GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
             G++   +    +V+VDFSSPNIAKEMHVGHLRSTIIGD I+R LE+LG+DV+RLNHVGD
Sbjct: 108  LGIK--KVENADKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYDVLRLNHVGD 165

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            WGTQFGMLI +L++ +PD LTK+    I DL  FYK++KKRFDED  F++ A   VV LQ
Sbjct: 166  WGTQFGMLITYLKEVYPDALTKADALEIGDLVNFYKQAKKRFDEDPKFQEAARDAVVKLQ 225

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              D +  +AW+++CD SRR+FQKIYDRLNV LTERGESFY  +++ ++  L+K+G+LE D
Sbjct: 226  SGDKESLQAWQLLCDQSRREFQKIYDRLNVQLTERGESFYNPYLDDVIKALDKQGILEKD 285

Query: 1398 DGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--- 1449
             G + ++ E   +     +P+ + KSDGG+ Y T+DLAA+R RI+E+KA  I+YVTD   
Sbjct: 286  QGAQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDLAALRYRIKEDKAKRIIYVTDAGQ 345

Query: 1450 HRSYHQVLQ 1458
               + QV Q
Sbjct: 346  SNHFAQVFQ 354


>gi|348684015|gb|EGZ23830.1| hypothetical protein PHYSODRAFT_556492 [Phytophthora sojae]
          Length = 814

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/596 (41%), Positives = 363/596 (60%), Gaps = 24/596 (4%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            +V   +  +F  A++ A+P + +    VA T  K   +FGD+QCN AM++    K   + 
Sbjct: 232  NVLGVVESIFDAAIKAAYPSV-NVPVEVARTTAKNA-QFGDYQCNSAMSIFTALKGTPDA 289

Query: 536  -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             ++P D+A +I       +A  P    V+D++ VA  GF+N FL++ +  +++ +++ NG
Sbjct: 290  ARSPRDVANTI-------IAAMPE-TPVLDRLSVAGAGFINAFLTKEFVSKRLGNVLANG 341

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            V+P    K+  ++VDFSSPNIAK+MHVGHLRSTIIGDT+ R+LE+  HDV R+NHVGDWG
Sbjct: 342  VKPAPQEKQ-TIVVDFSSPNIAKDMHVGHLRSTIIGDTMCRILEFQDHDVKRINHVGDWG 400

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLI HL + +P + T+ P + DL   YK +K+RFD D  F +R+   VV LQ  D 
Sbjct: 401  TQFGMLICHLTETYPTWETEMPNVTDLTLLYKAAKERFDADADFHERSKAQVVLLQSGDE 460

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
               K W  +C++SR +FQK+YDRL V+L E GESFY   +  ++  L  KGL+E+ +G +
Sbjct: 461  KSCKVWNTLCEISRIEFQKVYDRLGVSLKEMGESFYNPIIPSVLDILRAKGLMEMSNGAE 520

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            +++ +     P  +VKSDG + YDT+D+AA+  R+ E KA+ ++Y TD  Q  HF LL E
Sbjct: 521  VIFTKTHKQ-PFMLVKSDGSYLYDTTDIAALWYRLHEMKANRVIYYTDYSQKDHFNLLFE 579

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK- 893
              + +GI +P K R D VGFG V  E  K+FKTRSG+ V+L ELLDE   R   +L ++ 
Sbjct: 580  VGRMSGIYDPTKQRADHVGFGTVNDESGKRFKTRSGEVVRLVELLDEAKVRMKAQLVERI 639

Query: 894  -NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
                T L   ++  A + + YG +KY DL  +   +Y+FSFD+ML   G+TAVYL++AY 
Sbjct: 640  EAGQTSLPMDQVDAAAEKLGYGAVKYFDLRQSPTSNYIFSFDRMLSTNGDTAVYLMFAYA 699

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSL--EHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            R++SI R +G++   L    Q     L  EH  E AL   LL++ DV++ + +DL  + L
Sbjct: 700  RLSSIIRKSGVDMAALVAQQQKEGNVLKPEHPTEQALVIELLQLQDVIVFINKDLSSNRL 759

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            C YLY IS     F   C  +  + +       + RLLL +AT KVMK CF +L I
Sbjct: 760  CNYLYTISEKVQTFVTACRVLGSEEQ-------SSRLLLCDATLKVMKTCFSLLGI 808



 Score =  299 bits (765), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 149/349 (42%), Positives = 225/349 (64%), Gaps = 13/349 (3%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           +V   +  +F  A++ A+P + +    VA T  K   +FGD+QCN AM++    K   + 
Sbjct: 232 NVLGVVESIFDAAIKAAYPSV-NVPVEVARTTAKNA-QFGDYQCNSAMSIFTALKGTPDA 289

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            ++P D+A +I       +A  P    V+D++ VA  GF+N FL++ +  +++ +++ NG
Sbjct: 290 ARSPRDVANTI-------IAAMPE-TPVLDRLSVAGAGFINAFLTKEFVSKRLGNVLANG 341

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           V+P    K+  ++VDFSSPNIAK+MHVGHLRSTIIGDT+ R+LE+  HDV R+NHVGDWG
Sbjct: 342 VKPAPQEKQ-TIVVDFSSPNIAKDMHVGHLRSTIIGDTMCRILEFQDHDVKRINHVGDWG 400

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLI HL + +P + T+ P + DL   YK +K+RFD D  F +R+   VV LQ  D 
Sbjct: 401 TQFGMLICHLTETYPTWETEMPNVTDLTLLYKAAKERFDADADFHERSKAQVVLLQSGDE 460

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
              K W  +C++SR +FQK+YDRL V+L E GESFY   +  ++  L  KGL+E+ +G +
Sbjct: 461 KSCKVWNTLCEISRIEFQKVYDRLGVSLKEMGESFYNPIIPSVLDILRAKGLMEMSNGAE 520

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           +++ +     P  +VKSDG + YDT+D+AA+  R+ E KA+ ++Y TD+
Sbjct: 521 VIFTKTHKQ-PFMLVKSDGSYLYDTTDIAALWYRLHEMKANRVIYYTDY 568



 Score =  299 bits (765), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 149/349 (42%), Positives = 225/349 (64%), Gaps = 13/349 (3%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            +V   +  +F  A++ A+P + +    VA T  K   +FGD+QCN AM++    K   + 
Sbjct: 232  NVLGVVESIFDAAIKAAYPSV-NVPVEVARTTAKNA-QFGDYQCNSAMSIFTALKGTPDA 289

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             ++P D+A +I       +A  P    V+D++ VA  GF+N FL++ +  +++ +++ NG
Sbjct: 290  ARSPRDVANTI-------IAAMPE-TPVLDRLSVAGAGFINAFLTKEFVSKRLGNVLANG 341

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            V+P    K+  ++VDFSSPNIAK+MHVGHLRSTIIGDT+ R+LE+  HDV R+NHVGDWG
Sbjct: 342  VKPAPQEKQ-TIVVDFSSPNIAKDMHVGHLRSTIIGDTMCRILEFQDHDVKRINHVGDWG 400

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLI HL + +P + T+ P + DL   YK +K+RFD D  F +R+   VV LQ  D 
Sbjct: 401  TQFGMLICHLTETYPTWETEMPNVTDLTLLYKAAKERFDADADFHERSKAQVVLLQSGDE 460

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
               K W  +C++SR +FQK+YDRL V+L E GESFY   +  ++  L  KGL+E+ +G +
Sbjct: 461  KSCKVWNTLCEISRIEFQKVYDRLGVSLKEMGESFYNPIIPSVLDILRAKGLMEMSNGAE 520

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            +++ +     P  +VKSDG + YDT+D+AA+  R+ E KA+ ++Y TD+
Sbjct: 521  VIFTKTHKQ-PFMLVKSDGSYLYDTTDIAALWYRLHEMKANRVIYYTDY 568


>gi|75909766|ref|YP_324062.1| arginyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|109894972|sp|Q3M769.1|SYR_ANAVT RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|75703491|gb|ABA23167.1| arginyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 588

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/566 (45%), Positives = 361/566 (63%), Gaps = 31/566 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N A++L K               ++IAS +  +L     ++++ +  E+A PG
Sbjct: 38   KFGDYQANVALSLSKKLGQP---------PRAIASAIVEKL----DVSEICETPEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            F+N+ L   Y   Q+  I  +  +  PT     R +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85   FINLKLKTAYLEAQLNAIQADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 689
            +I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +    I DL +FY+++K
Sbjct: 145  SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 749
            +RFD DE F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD L+V LTERGESF
Sbjct: 205  QRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  LE  GLL  + G K ++       +   +P+ + KSDGG+ Y T+DLAA
Sbjct: 265  YNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +R RI++++A  IVYVTD GQ  HF    + A+KAG + PN   +  V FG+VLGED KK
Sbjct: 325  LRYRIQKDEAKRIVYVTDAGQANHFAQFFQVARKAGWI-PNDVELVHVPFGLVLGEDGKK 383

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKD--KNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            FKTRSGDTV+L +LLDE + R+   L++  K    E TP  + +  + V    +KYADLS
Sbjct: 384  FKTRSGDTVRLRDLLDEAVSRAHADLEERLKAEEREETPEFIDKVAEVVGISAVKYADLS 443

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  +Y+FS+DKMLD +GNTA Y+LYAY RI  I+R  GIN  DL     +  V L+H+
Sbjct: 444  QNRTSNYIFSYDKMLDLKGNTAPYMLYAYARIQGISRKGGINFADL---GDNAKVILQHD 500

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK-DAEGKIKT 1041
             EFALAK LL++ +V+  V  DL  + LCEYLY++S  F+ FYD    ++   AE   + 
Sbjct: 501  TEFALAKYLLQLGEVISTVEADLLPNRLCEYLYELSKKFNTFYDRNQGVQVLSAE---EP 557

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIR 1067
            + T RL+L + TA+ +K    +L I+
Sbjct: 558  LRTSRLVLCDLTARTLKLGLSLLGIQ 583



 Score =  276 bits (707), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 207/318 (65%), Gaps = 21/318 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N A++L K               ++IAS +  +L     ++++ +  E+A PG
Sbjct: 38  KFGDYQANVALSLSKKLGQP---------PRAIASAIVEKL----DVSEICETPEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           F+N+ L   Y   Q+  I  +  +  PT     R +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85  FINLKLKTAYLEAQLNAIQADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 299
           +I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +    I DL +FY+++K
Sbjct: 145 SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 359
           +RFD DE F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD L+V LTERGESF
Sbjct: 205 QRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  LE  GLL  + G K ++       +   +P+ + KSDGG+ Y T+DLAA
Sbjct: 265 YNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324

Query: 415 IRQRIEEEKADWIVYVTD 432
           +R RI++++A  IVYVTD
Sbjct: 325 LRYRIQKDEAKRIVYVTD 342



 Score =  276 bits (707), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 207/318 (65%), Gaps = 21/318 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N A++L K               ++IAS +  +L     ++++ +  E+A PG
Sbjct: 38   KFGDYQANVALSLSKKLGQP---------PRAIASAIVEKL----DVSEICETPEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            F+N+ L   Y   Q+  I  +  +  PT     R +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85   FINLKLKTAYLEAQLNAIQADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 1316
            +I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +    I DL +FY+++K
Sbjct: 145  SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 1376
            +RFD DE F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD L+V LTERGESF
Sbjct: 205  QRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  LE  GLL  + G K ++       +   +P+ + KSDGG+ Y T+DLAA
Sbjct: 265  YNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324

Query: 1432 IRQRIEEEKADWIVYVTD 1449
            +R RI++++A  IVYVTD
Sbjct: 325  LRYRIQKDEAKRIVYVTD 342


>gi|356520826|ref|XP_003529061.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Glycine max]
          Length = 597

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/603 (43%), Positives = 379/603 (62%), Gaps = 34/603 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASV--ASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            SV+  L+ VF  +++   P+  D   S+   + N+  V KF D+QCN+AM L   F    
Sbjct: 11   SVKKQLAKVFEESLRTTVPDEPDVVPSIDPCAANKAGV-KFADYQCNNAMGL---FAKMK 66

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
             K+  F   Q++   + + L      +++I+   VA PGFVN+ LS+ +  ++++ ++++
Sbjct: 67   GKQTGFKGPQAVGQAIRNNLPQ----SEMIESCSVAGPGFVNIVLSKKWIAQRLERLLID 122

Query: 594  GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG-HDVVRLNHV 650
            G+    P L  K  VLVDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+     ++R NH+
Sbjct: 123  GIDKWAPQLGVK-TVLVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSRVETLIRRNHL 181

Query: 651  GDWGTQFGMLIAHLQDKFPDY--LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            GDWGTQFGMLIAHL D +P+    T++  I DLQAFYK SK RFD D  FK RA Q VV 
Sbjct: 182  GDWGTQFGMLIAHLFDTYPNPEDFTEAA-IGDLQAFYKASKVRFDNDPEFKLRAQQSVVQ 240

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQ  +  Y  AW+ ICD+S+ +F+K+Y RL V L  RGES+Y   +   +  L+K GL+E
Sbjct: 241  LQSGEEKYHNAWQQICDISKAEFEKVYQRLGVLLEARGESYYNDLIPPTLERLDKLGLIE 300

Query: 769  LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
             DDG ++++ E   +IP+  VK DGGF Y ++DLAA+  R+  E  +W +YVTD+GQ  H
Sbjct: 301  EDDGARVIFVEG-ANIPIIAVKRDGGFNYSSTDLAALWYRLNVENVEWNIYVTDVGQWQH 359

Query: 829  FRLLEECAKKAGILNPNK----TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
            F ++ +  ++AG L PN      +   VGFG+VLGED K+F+TRS +TV+L ELLDE  R
Sbjct: 360  FDMVFKAFRRAGWL-PNDENEFPKCTHVGFGLVLGEDGKRFRTRSSETVRLVELLDEAKR 418

Query: 885  RSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
            R    L +++   + +  E+ +  +AV YG +KYADL  NR  +Y FSFD+ML+D+GNTA
Sbjct: 419  RCKASLLERDAVKDWSEEEIEKTAEAVGYGAVKYADLRINRLTNYTFSFDQMLNDKGNTA 478

Query: 945  VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
            VYL YA+ RI SI R +G + E+++   ++  + L+HE E AL   L++  +V      +
Sbjct: 479  VYLQYAHARICSIMRKSGKDIEEIK---KNGNIVLDHEDERALGLHLIQFPEVFEESLTN 535

Query: 1005 LCLHHLCEYLYDISTAFS-EFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            L  + LCEYLY+++  F+ +FY NC  +    E       T RLLL EAT  VM++CF +
Sbjct: 536  LLPNVLCEYLYNLTEIFTKKFYTNCQVVGSPEE-------TSRLLLCEATVTVMRQCFHL 588

Query: 1064 LNI 1066
            L I
Sbjct: 589  LGI 591



 Score =  288 bits (737), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/354 (44%), Positives = 225/354 (63%), Gaps = 18/354 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASV--ASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           SV+  L+ VF  +++   P+  D   S+   + N+  V KF D+QCN+AM L   F    
Sbjct: 11  SVKKQLAKVFEESLRTTVPDEPDVVPSIDPCAANKAGV-KFADYQCNNAMGL---FAKMK 66

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
            K+  F   Q++   + + L      +++I+   VA PGFVN+ LS+ +  ++++ ++++
Sbjct: 67  GKQTGFKGPQAVGQAIRNNLPQ----SEMIESCSVAGPGFVNIVLSKKWIAQRLERLLID 122

Query: 204 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG-HDVVRLNHV 260
           G+    P L  K  VLVDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+     ++R NH+
Sbjct: 123 GIDKWAPQLGVK-TVLVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSRVETLIRRNHL 181

Query: 261 GDWGTQFGMLIAHLQDKFPDY--LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           GDWGTQFGMLIAHL D +P+    T++  I DLQAFYK SK RFD D  FK RA Q VV 
Sbjct: 182 GDWGTQFGMLIAHLFDTYPNPEDFTEAA-IGDLQAFYKASKVRFDNDPEFKLRAQQSVVQ 240

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ  +  Y  AW+ ICD+S+ +F+K+Y RL V L  RGES+Y   +   +  L+K GL+E
Sbjct: 241 LQSGEEKYHNAWQQICDISKAEFEKVYQRLGVLLEARGESYYNDLIPPTLERLDKLGLIE 300

Query: 379 LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            DDG ++++ E   +IP+  VK DGGF Y ++DLAA+  R+  E  +W +YVTD
Sbjct: 301 EDDGARVIFVEG-ANIPIIAVKRDGGFNYSSTDLAALWYRLNVENVEWNIYVTD 353



 Score =  288 bits (737), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/354 (44%), Positives = 225/354 (63%), Gaps = 18/354 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASV--ASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            SV+  L+ VF  +++   P+  D   S+   + N+  V KF D+QCN+AM L   F    
Sbjct: 11   SVKKQLAKVFEESLRTTVPDEPDVVPSIDPCAANKAGV-KFADYQCNNAMGL---FAKMK 66

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
             K+  F   Q++   + + L      +++I+   VA PGFVN+ LS+ +  ++++ ++++
Sbjct: 67   GKQTGFKGPQAVGQAIRNNLPQ----SEMIESCSVAGPGFVNIVLSKKWIAQRLERLLID 122

Query: 1221 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG-HDVVRLNHV 1277
            G+    P L  K  VLVDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+     ++R NH+
Sbjct: 123  GIDKWAPQLGVK-TVLVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSRVETLIRRNHL 181

Query: 1278 GDWGTQFGMLIAHLQDKFPDY--LTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            GDWGTQFGMLIAHL D +P+    T++  I DLQAFYK SK RFD D  FK RA Q VV 
Sbjct: 182  GDWGTQFGMLIAHLFDTYPNPEDFTEAA-IGDLQAFYKASKVRFDNDPEFKLRAQQSVVQ 240

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQ  +  Y  AW+ ICD+S+ +F+K+Y RL V L  RGES+Y   +   +  L+K GL+E
Sbjct: 241  LQSGEEKYHNAWQQICDISKAEFEKVYQRLGVLLEARGESYYNDLIPPTLERLDKLGLIE 300

Query: 1396 LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             DDG ++++ E   +IP+  VK DGGF Y ++DLAA+  R+  E  +W +YVTD
Sbjct: 301  EDDGARVIFVEG-ANIPIIAVKRDGGFNYSSTDLAALWYRLNVENVEWNIYVTD 353


>gi|145481313|ref|XP_001426679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393755|emb|CAK59281.1| unnamed protein product [Paramecium tetraurelia]
          Length = 600

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/614 (43%), Positives = 373/614 (60%), Gaps = 39/614 (6%)

Query: 469  VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKI 528
            + V    SV+  +       V  AFP L   +  +   +      F +++    + +   
Sbjct: 4    IGVNTLRSVQKLIKSAMKTRVLTAFPNLPQNSFEIQLESISNNLNF-EYKTPTVIRIFNQ 62

Query: 529  FKDK---GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGE 585
            FK +   G+ K   ++AQ +AS   +E   N     VI K+E    GF+N+ L+  +  E
Sbjct: 63   FKKQNLFGDLKTEVEVAQKVAS---TECQDN-----VIQKVEAIDKGFLNIQLNDKFIEE 114

Query: 586  QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 645
            +I  ++VNG++ P L KK +V VDFSSPNIAKEMHVGHLRSTI+G+++ R+LE+ G +VV
Sbjct: 115  EINALLVNGLKFP-LEKKQKVAVDFSSPNIAKEMHVGHLRSTILGESLCRILEFQGQEVV 173

Query: 646  RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 705
            R+NH+GDWGTQFGMLI HL +++PDY T  P + +L+  YKE+KK+FD +E FK ++ Q 
Sbjct: 174  RINHIGDWGTQFGMLINHLLEEYPDYQTNRPALKELEDLYKEAKKKFDSNEEFKVKSQQF 233

Query: 706  VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 765
            VV LQ  DP    AW+MIC++SR+++ KIY RLNV +TE GES+Y   + ++V   E KG
Sbjct: 234  VVKLQALDPICIDAWKMICELSRQEYNKIYQRLNVKITEYGESYYNPILNEIVKECEAKG 293

Query: 766  LLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
            ++ELD G KI+   GE    +P+ IVK DGG+ YDT+D+AA + RI E K D ++Y+TD+
Sbjct: 294  IVELDQGAKIIRVKGE---KVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRLLYLTDV 350

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ  HF+L+ E AK  G   P  T M+ +GFG+VLG D KKFKTRSGDTVKL +LLDE  
Sbjct: 351  GQWNHFKLVFEGAKLMGWHQPPNTSMEHMGFGLVLGPDGKKFKTRSGDTVKLIDLLDEAK 410

Query: 884  RRSLDKLKDKNRH----------TELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSF 933
             R+L +++ + +           T L+P E   A + +    IKY DL  NR  DY F +
Sbjct: 411  ERALKQIQQRVQENQQGKEFSTGTALSPEEFETAAERMGIAAIKYYDLKQNRISDYNFDY 470

Query: 934  DKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLR 993
            DKMLD +GNTAVYL+Y+Y R+ SI R +GI  +D  V        + H+ E  LA  LLR
Sbjct: 471  DKMLDPKGNTAVYLMYSYVRMLSILRKSGI--QDFEVFKADHKFKITHQHERHLAAQLLR 528

Query: 994  MNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT-GRLLLAEA 1052
              DVL  VT  L ++ LC+Y+YDI    +E Y N Y I  D        HT  RLLL EA
Sbjct: 529  FVDVLQSVTDQLAINWLCDYIYDICVKIAEAY-NQYRILNDE-------HTQTRLLLCEA 580

Query: 1053 TAKVMKKCFDILNI 1066
               V+ + F ++ I
Sbjct: 581  VRMVLLQSFYLVGI 594



 Score =  291 bits (745), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/359 (43%), Positives = 228/359 (63%), Gaps = 18/359 (5%)

Query: 79  VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKI 138
           + V    SV+  +       V  AFP L   +  +   +      F +++    + +   
Sbjct: 4   IGVNTLRSVQKLIKSAMKTRVLTAFPNLPQNSFEIQLESISNNLNF-EYKTPTVIRIFNQ 62

Query: 139 FKDK---GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGE 195
           FK +   G+ K   ++AQ +AS   +E   N     VI K+E    GF+N+ L+  +  E
Sbjct: 63  FKKQNLFGDLKTEVEVAQKVAS---TECQDN-----VIQKVEAIDKGFLNIQLNDKFIEE 114

Query: 196 QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 255
           +I  ++VNG++ P L KK +V VDFSSPNIAKEMHVGHLRSTI+G+++ R+LE+ G +VV
Sbjct: 115 EINALLVNGLKFP-LEKKQKVAVDFSSPNIAKEMHVGHLRSTILGESLCRILEFQGQEVV 173

Query: 256 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 315
           R+NH+GDWGTQFGMLI HL +++PDY T  P + +L+  YKE+KK+FD +E FK ++ Q 
Sbjct: 174 RINHIGDWGTQFGMLINHLLEEYPDYQTNRPALKELEDLYKEAKKKFDSNEEFKVKSQQF 233

Query: 316 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 375
           VV LQ  DP    AW+MIC++SR+++ KIY RLNV +TE GES+Y   + ++V   E KG
Sbjct: 234 VVKLQALDPICIDAWKMICELSRQEYNKIYQRLNVKITEYGESYYNPILNEIVKECEAKG 293

Query: 376 LLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           ++ELD G KI+   GE    +P+ IVK DGG+ YDT+D+AA + RI E K D ++Y+TD
Sbjct: 294 IVELDQGAKIIRVKGE---KVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRLLYLTD 349



 Score =  291 bits (745), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/359 (43%), Positives = 228/359 (63%), Gaps = 18/359 (5%)

Query: 1096 VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKI 1155
            + V    SV+  +       V  AFP L   +  +   +      F +++    + +   
Sbjct: 4    IGVNTLRSVQKLIKSAMKTRVLTAFPNLPQNSFEIQLESISNNLNF-EYKTPTVIRIFNQ 62

Query: 1156 FKDK---GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGE 1212
            FK +   G+ K   ++AQ +AS   +E   N     VI K+E    GF+N+ L+  +  E
Sbjct: 63   FKKQNLFGDLKTEVEVAQKVAS---TECQDN-----VIQKVEAIDKGFLNIQLNDKFIEE 114

Query: 1213 QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 1272
            +I  ++VNG++ P L KK +V VDFSSPNIAKEMHVGHLRSTI+G+++ R+LE+ G +VV
Sbjct: 115  EINALLVNGLKFP-LEKKQKVAVDFSSPNIAKEMHVGHLRSTILGESLCRILEFQGQEVV 173

Query: 1273 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 1332
            R+NH+GDWGTQFGMLI HL +++PDY T  P + +L+  YKE+KK+FD +E FK ++ Q 
Sbjct: 174  RINHIGDWGTQFGMLINHLLEEYPDYQTNRPALKELEDLYKEAKKKFDSNEEFKVKSQQF 233

Query: 1333 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 1392
            VV LQ  DP    AW+MIC++SR+++ KIY RLNV +TE GES+Y   + ++V   E KG
Sbjct: 234  VVKLQALDPICIDAWKMICELSRQEYNKIYQRLNVKITEYGESYYNPILNEIVKECEAKG 293

Query: 1393 LLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++ELD G KI+   GE    +P+ IVK DGG+ YDT+D+AA + RI E K D ++Y+TD
Sbjct: 294  IVELDQGAKIIRVKGE---KVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRLLYLTD 349


>gi|449017880|dbj|BAM81282.1| arginine--tRNA ligase [Cyanidioschyzon merolae strain 10D]
          Length = 709

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/602 (43%), Positives = 368/602 (61%), Gaps = 50/602 (8%)

Query: 492  AFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTS 551
            A PE+ D     +S  E     FGDFQCN AM+L +  K K     P D+A+ +   +  
Sbjct: 125  ALPEVVDPMVVFSSRPE-----FGDFQCNVAMSLARQLKSK-----PRDVAERLRVGLEQ 174

Query: 552  ELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLR 605
            ++A           +EVA PGFVN  LS  Y    I+ ++      +N  +PP L    R
Sbjct: 175  KVA-----GMCATPLEVAGPGFVNFRLSDGYLASVIRQMMSDPRGKLNVPEPPKLQ---R 226

Query: 606  VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 665
            ++VDFSSPNIAKEMHVGHLRSTIIGDT+ R+LEYLGH V+RLNHVGDWGTQFGMLIA+L 
Sbjct: 227  IVVDFSSPNIAKEMHVGHLRSTIIGDTLCRVLEYLGHTVIRLNHVGDWGTQFGMLIAYLA 286

Query: 666  DKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMI 723
            +  P+ LT  + P + DL AFYK++KKRFDED +F+  A   V  LQ  D    +AW ++
Sbjct: 287  EVAPEALTGERPPDLGDLVAFYKQAKKRFDEDPVFQNAARAQVTKLQSGDEASLRAWRLL 346

Query: 724  CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---- 779
            C++SRR+F+KIY  L+V LTERGESFY  ++  ++  LE+KGL+++D G   ++ E    
Sbjct: 347  CELSRREFEKIYQLLDVQLTERGESFYNPYLPDVIERLERKGLVQVDQGALCVFLEGFKN 406

Query: 780  -DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKK 838
             D    P+ + KSDGG+ Y T+DLAAI  R++E++A  I+YVTD GQ  HF  + + A++
Sbjct: 407  RDGSPQPLIVRKSDGGYMYSTTDLAAILYRVQEDRAQRILYVTDAGQATHFAQVFQVARR 466

Query: 839  AGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL---RRSLD-KLKDKN 894
            AG  +P +  ++ V FG+VLG+D KKFKTRSGDTV+L +LL+  +   R  L+ ++ ++ 
Sbjct: 467  AGFFDPAEVSLEHVPFGLVLGDDGKKFKTRSGDTVRLMDLLERAIELARHDLEQRIAEQP 526

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
              TE +P  L  A +A+  G +KYADL   R  DY FS++KML   GNTA Y++Y +TR+
Sbjct: 527  GRTE-SPEYLERAARAIGIGAVKYADLRTTRTADYRFSYEKMLSLNGNTAPYMMYVFTRV 585

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEF----------ALAKTLLRMNDVLMLVTRD 1004
            + IAR A     D  V  Q    +   E++           ALA+ LLR   VL+ + R+
Sbjct: 586  SGIARKAAGLPADAEVCMQELVANCASEQQLLLCVTEPAEGALARQLLRFPYVLLDLERE 645

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            L  H LCEYL+++S  F++FY++C  +  + +    +V   RL L   T  V++    +L
Sbjct: 646  LMPHVLCEYLFELSQRFNQFYEHCPVLGAEDD----SVRHSRLALCALTGYVVESGLRLL 701

Query: 1065 NI 1066
             I
Sbjct: 702  GI 703



 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 184/453 (40%), Positives = 261/453 (57%), Gaps = 58/453 (12%)

Query: 1029 YCIEKDAEGKIKTVHTG--RLLLAEATAKVMKKCFDI-----------------LNIRTA 1069
            YC  + A   +   H+G   L+ A A  + + +CF +                 +N+R  
Sbjct: 24   YCRGRAA--SVCYRHSGLRSLISARAGRRTLDQCFGVGARGGPFRKQVRRLEGPVNLR-- 79

Query: 1070 IAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTAS 1129
            +A E K     + ++      + ++      R SV + LS  +  A+    PE+ D    
Sbjct: 80   MAREVKHSAGLAGMAPDAPAESYRLGPLEYLRRSVIEVLSKEYGDAL----PEVVDPMVV 135

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
             +S  E     FGDFQCN AM+L +  K K     P D+A+ +   +  ++A        
Sbjct: 136  FSSRPE-----FGDFQCNVAMSLARQLKSK-----PRDVAERLRVGLEQKVA-----GMC 180

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIA 1243
               +EVA PGFVN  LS  Y    I+ ++      +N  +PP L    R++VDFSSPNIA
Sbjct: 181  ATPLEVAGPGFVNFRLSDGYLASVIRQMMSDPRGKLNVPEPPKLQ---RIVVDFSSPNIA 237

Query: 1244 KEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLT--K 1301
            KEMHVGHLRSTIIGDT+ R+LEYLGH V+RLNHVGDWGTQFGMLIA+L +  P+ LT  +
Sbjct: 238  KEMHVGHLRSTIIGDTLCRVLEYLGHTVIRLNHVGDWGTQFGMLIAYLAEVAPEALTGER 297

Query: 1302 SPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKI 1361
             P + DL AFYK++KKRFDED +F+  A   V  LQ  D    +AW ++C++SRR+F+KI
Sbjct: 298  PPDLGDLVAFYKQAKKRFDEDPVFQNAARAQVTKLQSGDEASLRAWRLLCELSRREFEKI 357

Query: 1362 YDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIV 1416
            Y  L+V LTERGESFY  ++  ++  LE+KGL+++D G   ++ E     D    P+ + 
Sbjct: 358  YQLLDVQLTERGESFYNPYLPDVIERLERKGLVQVDQGALCVFLEGFKNRDGSPQPLIVR 417

Query: 1417 KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            KSDGG+ Y T+DLAAI  R++E++A  I+YVTD
Sbjct: 418  KSDGGYMYSTTDLAAILYRVQEDRAQRILYVTD 450



 Score =  306 bits (785), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 164/344 (47%), Positives = 221/344 (64%), Gaps = 31/344 (9%)

Query: 102 AFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTS 161
           A PE+ D     +S  E     FGDFQCN AM+L +  K K     P D+A+ +   +  
Sbjct: 125 ALPEVVDPMVVFSSRPE-----FGDFQCNVAMSLARQLKSK-----PRDVAERLRVGLEQ 174

Query: 162 ELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLR 215
           ++A           +EVA PGFVN  LS  Y    I+ ++      +N  +PP L    R
Sbjct: 175 KVA-----GMCATPLEVAGPGFVNFRLSDGYLASVIRQMMSDPRGKLNVPEPPKLQ---R 226

Query: 216 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 275
           ++VDFSSPNIAKEMHVGHLRSTIIGDT+ R+LEYLGH V+RLNHVGDWGTQFGMLIA+L 
Sbjct: 227 IVVDFSSPNIAKEMHVGHLRSTIIGDTLCRVLEYLGHTVIRLNHVGDWGTQFGMLIAYLA 286

Query: 276 DKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMI 333
           +  P+ LT  + P + DL AFYK++KKRFDED +F+  A   V  LQ  D    +AW ++
Sbjct: 287 EVAPEALTGERPPDLGDLVAFYKQAKKRFDEDPVFQNAARAQVTKLQSGDEASLRAWRLL 346

Query: 334 CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---- 389
           C++SRR+F+KIY  L+V LTERGESFY  ++  ++  LE+KGL+++D G   ++ E    
Sbjct: 347 CELSRREFEKIYQLLDVQLTERGESFYNPYLPDVIERLERKGLVQVDQGALCVFLEGFKN 406

Query: 390 -DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            D    P+ + KSDGG+ Y T+DLAAI  R++E++A  I+YVTD
Sbjct: 407 RDGSPQPLIVRKSDGGYMYSTTDLAAILYRVQEDRAQRILYVTD 450


>gi|427419181|ref|ZP_18909364.1| arginyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
 gi|425761894|gb|EKV02747.1| arginyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
          Length = 584

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 272/607 (44%), Positives = 371/607 (61%), Gaps = 45/607 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            +S  D L      A+  AF P+L      +  TN     KFGD+Q N AM+L K  KDK 
Sbjct: 2    LSTLDDLKHRLQTALVSAFGPDLEGTDPVLVPTNNP---KFGDYQANVAMSLAKRLKDK- 57

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
                P  IA  I          N +L  + ++ ++A PGF+N+     Y   Q+K +  +
Sbjct: 58   ----PRAIATKIVE--------NLTLDDLCEEPQIAGPGFINLKFKTTYLQAQLKTVYTD 105

Query: 594  ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
               GV  PT +   R +VDFSSPNIAKEMHVGHLRSTIIG+ I+R LE+LGHDV+RLNHV
Sbjct: 106  DRLGV--PTADPVQRTIVDFSSPNIAKEMHVGHLRSTIIGECIARTLEFLGHDVLRLNHV 163

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            GDWGTQFGMLI HL+D  P+ +T+S    I DL  FYK++KKRFD+DE FK  + + VV 
Sbjct: 164  GDWGTQFGMLITHLRDVCPEAITESSSVDIGDLVEFYKQAKKRFDDDEDFKTTSREAVVD 223

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQ  +   +KAW+++C+ SR++FQKIYDRL++T+ ERGESFY   +E +   L+   LLE
Sbjct: 224  LQSGEESARKAWQLLCEQSRKEFQKIYDRLDITIQERGESFYNPLLEDVAKDLKSLELLE 283

Query: 769  LDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             D G ++++ E     D    P+ + KSDGGF Y T+DLAAIRQR  +EKA  ++Y+TD 
Sbjct: 284  EDQGAQVVFLEGFTNKDGNPQPLIVQKSDGGFNYATTDLAAIRQRTIDEKAQRVIYITDA 343

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ  HF  + + A +A  + P    +  V FG+V GE+ KK KTRSG+TVKL  LLDE +
Sbjct: 344  GQANHFAQVFQVANRAHWI-PAGVELVHVPFGLVKGENGKKLKTRSGETVKLKSLLDEAV 402

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQ----AVAYGCIKYADLSHNRNLDYVFSFDKMLDD 939
             R+   L  + R TE    E +E  Q    AV  G +KYADLS NR  DY+FSFDKML  
Sbjct: 403  TRAEKDL--QTRITEENRDESAEFIQTVSTAVGIGAVKYADLSQNRTSDYIFSFDKMLAL 460

Query: 940  RGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLM 999
            +GNTA Y+LYAY R+  I+R   I+   L  A+    + LE + E ALAK LL ++  +M
Sbjct: 461  QGNTAPYMLYAYVRVQGISRKGNIDFTQLGDAS----ILLEDDSELALAKHLLELDTAVM 516

Query: 1000 LVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
             V RDL  + LC+YL+++S  F++FYD C  ++ +   +     T RL+L + TA+ +K 
Sbjct: 517  EVARDLYPNRLCQYLFELSQKFNQFYDRCSVLQAEEPQR-----TSRLMLCDLTARTLKL 571

Query: 1060 CFDILNI 1066
               +L +
Sbjct: 572  GLSLLGM 578



 Score =  302 bits (773), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 172/371 (46%), Positives = 230/371 (61%), Gaps = 32/371 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           +S  D L      A+  AF P+L      +  TN     KFGD+Q N AM+L K  KDK 
Sbjct: 2   LSTLDDLKHRLQTALVSAFGPDLEGTDPVLVPTNNP---KFGDYQANVAMSLAKRLKDK- 57

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
               P  IA  I          N +L  + ++ ++A PGF+N+     Y   Q+K +  +
Sbjct: 58  ----PRAIATKIVE--------NLTLDDLCEEPQIAGPGFINLKFKTTYLQAQLKTVYTD 105

Query: 204 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
              GV  PT +   R +VDFSSPNIAKEMHVGHLRSTIIG+ I+R LE+LGHDV+RLNHV
Sbjct: 106 DRLGV--PTADPVQRTIVDFSSPNIAKEMHVGHLRSTIIGECIARTLEFLGHDVLRLNHV 163

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           GDWGTQFGMLI HL+D  P+ +T+S    I DL  FYK++KKRFD+DE FK  + + VV 
Sbjct: 164 GDWGTQFGMLITHLRDVCPEAITESSSVDIGDLVEFYKQAKKRFDDDEDFKTTSREAVVD 223

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ  +   +KAW+++C+ SR++FQKIYDRL++T+ ERGESFY   +E +   L+   LLE
Sbjct: 224 LQSGEESARKAWQLLCEQSRKEFQKIYDRLDITIQERGESFYNPLLEDVAKDLKSLELLE 283

Query: 379 LDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD- 432
            D G ++++ E     D    P+ + KSDGGF Y T+DLAAIRQR  +EKA  ++Y+TD 
Sbjct: 284 EDQGAQVVFLEGFTNKDGNPQPLIVQKSDGGFNYATTDLAAIRQRTIDEKAQRVIYITDA 343

Query: 433 --HRSYHQVLQ 441
                + QV Q
Sbjct: 344 GQANHFAQVFQ 354



 Score =  302 bits (773), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 172/371 (46%), Positives = 230/371 (61%), Gaps = 32/371 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            +S  D L      A+  AF P+L      +  TN     KFGD+Q N AM+L K  KDK 
Sbjct: 2    LSTLDDLKHRLQTALVSAFGPDLEGTDPVLVPTNNP---KFGDYQANVAMSLAKRLKDK- 57

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
                P  IA  I          N +L  + ++ ++A PGF+N+     Y   Q+K +  +
Sbjct: 58   ----PRAIATKIVE--------NLTLDDLCEEPQIAGPGFINLKFKTTYLQAQLKTVYTD 105

Query: 1221 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
               GV  PT +   R +VDFSSPNIAKEMHVGHLRSTIIG+ I+R LE+LGHDV+RLNHV
Sbjct: 106  DRLGV--PTADPVQRTIVDFSSPNIAKEMHVGHLRSTIIGECIARTLEFLGHDVLRLNHV 163

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            GDWGTQFGMLI HL+D  P+ +T+S    I DL  FYK++KKRFD+DE FK  + + VV 
Sbjct: 164  GDWGTQFGMLITHLRDVCPEAITESSSVDIGDLVEFYKQAKKRFDDDEDFKTTSREAVVD 223

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQ  +   +KAW+++C+ SR++FQKIYDRL++T+ ERGESFY   +E +   L+   LLE
Sbjct: 224  LQSGEESARKAWQLLCEQSRKEFQKIYDRLDITIQERGESFYNPLLEDVAKDLKSLELLE 283

Query: 1396 LDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD- 1449
             D G ++++ E     D    P+ + KSDGGF Y T+DLAAIRQR  +EKA  ++Y+TD 
Sbjct: 284  EDQGAQVVFLEGFTNKDGNPQPLIVQKSDGGFNYATTDLAAIRQRTIDEKAQRVIYITDA 343

Query: 1450 --HRSYHQVLQ 1458
                 + QV Q
Sbjct: 344  GQANHFAQVFQ 354


>gi|90076998|dbj|BAE88179.1| unnamed protein product [Macaca fascicularis]
          Length = 380

 Score =  468 bits (1205), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/391 (58%), Positives = 293/391 (74%), Gaps = 12/391 (3%)

Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
           +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 2   ININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQMLKTKEQ 58

Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
           K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 59  KVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 110

Query: 595 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
           VQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNHVGDWG
Sbjct: 111 VQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRLNHVGDWG 170

Query: 655 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
           TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 171 TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNP 230

Query: 715 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
           D  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 231 DITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFVQVDDGRK 290

Query: 775 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
           I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ VHF+ +  
Sbjct: 291 IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFA 349

Query: 835 CAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            A+  G  +P  TR+   GFGVVLGED+KKF
Sbjct: 350 AAQMIGWYDPKVTRVFHAGFGVVLGEDKKKF 380



 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/348 (59%), Positives = 265/348 (76%), Gaps = 12/348 (3%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 2   ININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQMLKTKEQ 58

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
           K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 59  KVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 110

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           VQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNHVGDWG
Sbjct: 111 VQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRLNHVGDWG 170

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 171 TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNP 230

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
           D  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 231 DITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFVQVDDGRK 290

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 291 IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 337



 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/348 (59%), Positives = 265/348 (76%), Gaps = 12/348 (3%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +++   L +VF HA++ A+P+L +    V  + +    KFGD+QCN AM + ++ K K +
Sbjct: 2    ININSRLQEVFGHAIKAAYPDLENPPLLVTPSQQP---KFGDYQCNSAMGISQMLKTKEQ 58

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K NP +IA++I    T  L  N    + I+K+E+A PGF+NV L + +  EQ+  ++VNG
Sbjct: 59   KVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNG 110

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            VQ P + +  +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNHVGDWG
Sbjct: 111  VQLPAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRLNHVGDWG 170

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV LQ  +P
Sbjct: 171  TQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNP 230

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D  KAW++ICDVSR++F KIYD L+V+L ERGESFYQ  M  +V   E +G +++DDGRK
Sbjct: 231  DITKAWKLICDVSRQEFNKIYDALDVSLIERGESFYQDRMNDIVQEFEDRGFVQVDDGRK 290

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            I++     SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 291  IVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVD 337


>gi|186684132|ref|YP_001867328.1| arginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689424|sp|B2J6I0.1|SYR_NOSP7 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|186466584|gb|ACC82385.1| arginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 584

 Score =  468 bits (1204), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/569 (45%), Positives = 363/569 (63%), Gaps = 39/569 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 571
            KFGD+Q N A++L K        K P  IA +I   +  SE+   P         E+A P
Sbjct: 38   KFGDYQANVALSLSKKLG-----KQPRAIAGAIVEKLDVSEICEPP---------EIAGP 83

Query: 572  GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            GF+N+ L   Y   Q+ DI  +   GV  P      R  VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINLKLKTAYLEAQLNDIQADPRLGV--PAAKTPKRENVDFSSPNIAKEMHVGHLRSTI 141

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 686
            IGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +PD LT +    I DL +FY+
Sbjct: 142  IGDSIARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPDALTTANALDIGDLVSFYR 201

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 746
            ++K+RFD D  F++ A Q VV LQ    D   AW+++C+ SRR+FQ IY+ L++ LTERG
Sbjct: 202  KAKQRFDTDTAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLTERG 261

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
            ESFY   +  +V  LEK GLL  + G K ++ E     +   +P+ + KSDGG+ Y T+D
Sbjct: 262  ESFYNPLLSGIVEDLEKSGLLVENQGAKCVFLEGFTNREGEPLPLIVQKSDGGYNYATTD 321

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LA++R RI++++A  I+YVTD GQG HF    + A+KAG + P+   +  V FG+VLGED
Sbjct: 322  LASLRYRIQQDQAKRIIYVTDAGQGNHFAQFFQVARKAGWI-PDDVELVHVPFGLVLGED 380

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYA 919
             KKFKTRSGDTV+L +LLDE +  +   LK + +  E   TE  ++E  + V    +KYA
Sbjct: 381  GKKFKTRSGDTVRLRDLLDEAVSHAHADLKTRLQKEERQETEEFINEVARVVGISAVKYA 440

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  +Y+FS+DKMLD +GNTA Y+LY Y RI  I+R   IN ++L     +  V L
Sbjct: 441  DLSQNRTSNYIFSYDKMLDLKGNTAPYMLYVYARIHGISRKGDINFKEL----GNNAVLL 496

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
            +HE E ALAK LL++++V+  V +DL  + LCEYL+++S  F++FYD C  ++ +   + 
Sbjct: 497  QHETELALAKYLLQLDEVISSVEQDLLPNRLCEYLFELSQKFNQFYDRCSILQAEEPQR- 555

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                T RL+L + TA+ +K    +L I+ 
Sbjct: 556  ----TSRLVLCDLTARTLKLGLSLLGIQV 580



 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/321 (47%), Positives = 208/321 (64%), Gaps = 27/321 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 181
           KFGD+Q N A++L K        K P  IA +I   +  SE+   P         E+A P
Sbjct: 38  KFGDYQANVALSLSKKLG-----KQPRAIAGAIVEKLDVSEICEPP---------EIAGP 83

Query: 182 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           GF+N+ L   Y   Q+ DI  +   GV  P      R  VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84  GFINLKLKTAYLEAQLNDIQADPRLGV--PAAKTPKRENVDFSSPNIAKEMHVGHLRSTI 141

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 296
           IGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +PD LT +    I DL +FY+
Sbjct: 142 IGDSIARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPDALTTANALDIGDLVSFYR 201

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 356
           ++K+RFD D  F++ A Q VV LQ    D   AW+++C+ SRR+FQ IY+ L++ LTERG
Sbjct: 202 KAKQRFDTDTAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLTERG 261

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
           ESFY   +  +V  LEK GLL  + G K ++ E     +   +P+ + KSDGG+ Y T+D
Sbjct: 262 ESFYNPLLSGIVEDLEKSGLLVENQGAKCVFLEGFTNREGEPLPLIVQKSDGGYNYATTD 321

Query: 412 LAAIRQRIEEEKADWIVYVTD 432
           LA++R RI++++A  I+YVTD
Sbjct: 322 LASLRYRIQQDQAKRIIYVTD 342



 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/321 (47%), Positives = 208/321 (64%), Gaps = 27/321 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 1198
            KFGD+Q N A++L K        K P  IA +I   +  SE+   P         E+A P
Sbjct: 38   KFGDYQANVALSLSKKLG-----KQPRAIAGAIVEKLDVSEICEPP---------EIAGP 83

Query: 1199 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            GF+N+ L   Y   Q+ DI  +   GV  P      R  VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINLKLKTAYLEAQLNDIQADPRLGV--PAAKTPKRENVDFSSPNIAKEMHVGHLRSTI 141

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 1313
            IGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +PD LT +    I DL +FY+
Sbjct: 142  IGDSIARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPDALTTANALDIGDLVSFYR 201

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
            ++K+RFD D  F++ A Q VV LQ    D   AW+++C+ SRR+FQ IY+ L++ LTERG
Sbjct: 202  KAKQRFDTDTAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLTERG 261

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
            ESFY   +  +V  LEK GLL  + G K ++ E     +   +P+ + KSDGG+ Y T+D
Sbjct: 262  ESFYNPLLSGIVEDLEKSGLLVENQGAKCVFLEGFTNREGEPLPLIVQKSDGGYNYATTD 321

Query: 1429 LAAIRQRIEEEKADWIVYVTD 1449
            LA++R RI++++A  I+YVTD
Sbjct: 322  LASLRYRIQQDQAKRIIYVTD 342


>gi|145481811|ref|XP_001426928.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394006|emb|CAK59530.1| unnamed protein product [Paramecium tetraurelia]
          Length = 600

 Score =  468 bits (1204), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/618 (43%), Positives = 373/618 (60%), Gaps = 47/618 (7%)

Query: 469  VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA----STNEKYVHKFGDFQCNDAMA 524
            + V    SV+  +       V  AFP L   +  +     S N  +     +++    + 
Sbjct: 4    IGVNTMRSVQKLIKSAMKTRVLTAFPNLPQNSFEIQLESISNNLNF-----EYKTPTVIR 58

Query: 525  LCKIFKDK---GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRV 581
            +   FK +   G+ K+  ++AQ IA+    +         VI K+E  + GF+ + L+  
Sbjct: 59   IYNQFKKQNLFGDLKSEVEVAQKIAATEGQD--------NVIQKVEAIEKGFLTIQLNNQ 110

Query: 582  YAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG 641
            +  ++I  I+ NG++ P L KK +V+VD+SSPNIAKEMHVGHLRSTI+G+++ R+LE+ G
Sbjct: 111  FIEDEINSILANGLKFP-LEKKQKVVVDYSSPNIAKEMHVGHLRSTILGESLCRILEFQG 169

Query: 642  HDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKR 701
             +VVR+NHVGDWGTQFGMLI HL +++PDY T  P + +L+  YKE+KK+FD +E FK +
Sbjct: 170  QEVVRVNHVGDWGTQFGMLINHLLEEYPDYQTNKPALKELEDLYKEAKKKFDSNEEFKLK 229

Query: 702  AYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYL 761
            + Q VV LQ  DP    AW+MICD+SR+++ KIY RLNV +TE GES+Y   + ++V   
Sbjct: 230  SQQFVVKLQALDPVCIDAWKMICDLSRQEYNKIYQRLNVKITEYGESYYNPILNEIVKEC 289

Query: 762  EKKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
            E KG++ELD G KI+   GE    +P+ IVK DGG+ YDT+D+AA + RI E K D ++Y
Sbjct: 290  EAKGIVELDQGAKIIRVKGE---KVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRLLY 346

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
            +TD+GQ  HF+L+ E AK  G   P  T M+ +GFG+VLG D KKFKTRSGDTVKL +LL
Sbjct: 347  LTDVGQWNHFKLVFEGAKLMGWHQPPNTSMEHMGFGLVLGPDGKKFKTRSGDTVKLIDLL 406

Query: 880  DEGLRRSLDKL----------KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDY 929
            DE   R+L ++          K+ +  T L+P E   A + +    IKY DL  NR  DY
Sbjct: 407  DEAKERALKQIQLRVQENQQGKEFSTGTALSPEEFETAAERMGIAAIKYYDLKQNRISDY 466

Query: 930  VFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAK 989
             F +DKMLD +GNTAVYL+Y+Y R+ SI R +GI  +D  V        + H+ E  LA 
Sbjct: 467  NFDYDKMLDPKGNTAVYLMYSYVRMLSILRKSGI--QDFEVFKGEHKFKITHQHERHLAA 524

Query: 990  TLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT-GRLL 1048
             LLR  DVL  VT  L ++ LC+Y+YDI    +E Y N Y I  D        HT  RLL
Sbjct: 525  QLLRFVDVLQSVTDQLAINWLCDYIYDICVKIAEAY-NQYRILNDE-------HTQTRLL 576

Query: 1049 LAEATAKVMKKCFDILNI 1066
            L EA   V+ + F ++ I
Sbjct: 577  LCEAVKMVLLQSFHLVGI 594



 Score =  289 bits (740), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 155/363 (42%), Positives = 228/363 (62%), Gaps = 26/363 (7%)

Query: 79  VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA----STNEKYVHKFGDFQCNDAMA 134
           + V    SV+  +       V  AFP L   +  +     S N  +     +++    + 
Sbjct: 4   IGVNTMRSVQKLIKSAMKTRVLTAFPNLPQNSFEIQLESISNNLNF-----EYKTPTVIR 58

Query: 135 LCKIFKDK---GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRV 191
           +   FK +   G+ K+  ++AQ IA+    +         VI K+E  + GF+ + L+  
Sbjct: 59  IYNQFKKQNLFGDLKSEVEVAQKIAATEGQD--------NVIQKVEAIEKGFLTIQLNNQ 110

Query: 192 YAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG 251
           +  ++I  I+ NG++ P L KK +V+VD+SSPNIAKEMHVGHLRSTI+G+++ R+LE+ G
Sbjct: 111 FIEDEINSILANGLKFP-LEKKQKVVVDYSSPNIAKEMHVGHLRSTILGESLCRILEFQG 169

Query: 252 HDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKR 311
            +VVR+NHVGDWGTQFGMLI HL +++PDY T  P + +L+  YKE+KK+FD +E FK +
Sbjct: 170 QEVVRVNHVGDWGTQFGMLINHLLEEYPDYQTNKPALKELEDLYKEAKKKFDSNEEFKLK 229

Query: 312 AYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYL 371
           + Q VV LQ  DP    AW+MICD+SR+++ KIY RLNV +TE GES+Y   + ++V   
Sbjct: 230 SQQFVVKLQALDPVCIDAWKMICDLSRQEYNKIYQRLNVKITEYGESYYNPILNEIVKEC 289

Query: 372 EKKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 429
           E KG++ELD G KI+   GE    +P+ IVK DGG+ YDT+D+AA + RI E K D ++Y
Sbjct: 290 EAKGIVELDQGAKIIRVKGE---KVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRLLY 346

Query: 430 VTD 432
           +TD
Sbjct: 347 LTD 349



 Score =  289 bits (740), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 155/363 (42%), Positives = 228/363 (62%), Gaps = 26/363 (7%)

Query: 1096 VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA----STNEKYVHKFGDFQCNDAMA 1151
            + V    SV+  +       V  AFP L   +  +     S N  +     +++    + 
Sbjct: 4    IGVNTMRSVQKLIKSAMKTRVLTAFPNLPQNSFEIQLESISNNLNF-----EYKTPTVIR 58

Query: 1152 LCKIFKDK---GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRV 1208
            +   FK +   G+ K+  ++AQ IA+    +         VI K+E  + GF+ + L+  
Sbjct: 59   IYNQFKKQNLFGDLKSEVEVAQKIAATEGQD--------NVIQKVEAIEKGFLTIQLNNQ 110

Query: 1209 YAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG 1268
            +  ++I  I+ NG++ P L KK +V+VD+SSPNIAKEMHVGHLRSTI+G+++ R+LE+ G
Sbjct: 111  FIEDEINSILANGLKFP-LEKKQKVVVDYSSPNIAKEMHVGHLRSTILGESLCRILEFQG 169

Query: 1269 HDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKR 1328
             +VVR+NHVGDWGTQFGMLI HL +++PDY T  P + +L+  YKE+KK+FD +E FK +
Sbjct: 170  QEVVRVNHVGDWGTQFGMLINHLLEEYPDYQTNKPALKELEDLYKEAKKKFDSNEEFKLK 229

Query: 1329 AYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYL 1388
            + Q VV LQ  DP    AW+MICD+SR+++ KIY RLNV +TE GES+Y   + ++V   
Sbjct: 230  SQQFVVKLQALDPVCIDAWKMICDLSRQEYNKIYQRLNVKITEYGESYYNPILNEIVKEC 289

Query: 1389 EKKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 1446
            E KG++ELD G KI+   GE    +P+ IVK DGG+ YDT+D+AA + RI E K D ++Y
Sbjct: 290  EAKGIVELDQGAKIIRVKGE---KVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRLLY 346

Query: 1447 VTD 1449
            +TD
Sbjct: 347  LTD 349


>gi|220909041|ref|YP_002484352.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782957|sp|B8HSK8.1|SYR_CYAP4 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|219865652|gb|ACL45991.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 585

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/573 (44%), Positives = 361/573 (63%), Gaps = 46/573 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N  + L K               ++IAS +   L     + +  +   +A PG
Sbjct: 38   KFGDYQSNAPLPLAKQLNQP---------PRTIASTIVDHL----EVGEAWEPPTIAGPG 84

Query: 573  FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N  L   Y   Q++       + ++ V+ P     LRV+VDFSSPNIAKEMHVGHLRS
Sbjct: 85   FINFTLKTSYLASQLELRLTDPRLGISAVKLP-----LRVVVDFSSPNIAKEMHVGHLRS 139

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAF 684
            TIIGD ++R+LE+LGH+V+RLNHVGDWGTQFGMLI +L++  P+ LT    +   DL AF
Sbjct: 140  TIIGDCLARILEFLGHEVLRLNHVGDWGTQFGMLITYLREVCPEALTAPDAVDLGDLVAF 199

Query: 685  YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 744
            Y+++K+RFD D  F+  A Q VV LQ  +PD   AW+++C  SRR+F+KIY+ L++ LTE
Sbjct: 200  YRQAKQRFDSDPDFQAIARQEVVRLQSGEPDSLHAWQLLCAQSRREFEKIYNLLDIKLTE 259

Query: 745  RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDT 799
            RGESFY   + Q++  L++ GLL  D G K ++ E   +      P+ + KSDGG+ Y T
Sbjct: 260  RGESFYNPLLPQVIQALDQTGLLVEDQGAKCVFLEGYTNKAGDPQPLIVQKSDGGYIYAT 319

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLAA+R RIE+++ADWI+YVTD GQ  HF  + + A++AG + PN+ R+  V FG+V G
Sbjct: 320  TDLAALRYRIEQDQADWIIYVTDAGQSTHFAQVFQVAQRAGWI-PNRIRLVHVPFGLVQG 378

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQAVAYGC 915
            ED KK KTRSGDTV+L +LLDE + R+    + +L+ + R    TP  +    Q V  G 
Sbjct: 379  EDGKKLKTRSGDTVRLQDLLDEAIDRARNDLVSRLEAEGRQE--TPEFIDHVAQVVGIGA 436

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
            +KYADLS NR  +YVFS+DKML  +GNTA YL+YAY R+  I+R   I+ E L    +  
Sbjct: 437  VKYADLSQNRTSNYVFSYDKMLSLQGNTAPYLIYAYVRVQGISRKGQIDLEQL---TEQP 493

Query: 976  PVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDA 1035
             +SL+ E+E  LA+ LL++ DVL  VT DL  + LC+YL+++S  F++FYD C  ++ + 
Sbjct: 494  TLSLQEEEEKLLARHLLQLEDVLAQVTEDLLPNRLCQYLFELSQKFNQFYDRCPILQAE- 552

Query: 1036 EGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                + +   RL LA+ TA+ +K    +L I+ 
Sbjct: 553  ----EPLRNSRLGLAQLTARTLKLGLSLLGIQV 581



 Score =  281 bits (718), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 148/323 (45%), Positives = 207/323 (64%), Gaps = 31/323 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N  + L K               ++IAS +   L     + +  +   +A PG
Sbjct: 38  KFGDYQSNAPLPLAKQLNQP---------PRTIASTIVDHL----EVGEAWEPPTIAGPG 84

Query: 183 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N  L   Y   Q++       + ++ V+ P     LRV+VDFSSPNIAKEMHVGHLRS
Sbjct: 85  FINFTLKTSYLASQLELRLTDPRLGISAVKLP-----LRVVVDFSSPNIAKEMHVGHLRS 139

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAF 294
           TIIGD ++R+LE+LGH+V+RLNHVGDWGTQFGMLI +L++  P+ LT    +   DL AF
Sbjct: 140 TIIGDCLARILEFLGHEVLRLNHVGDWGTQFGMLITYLREVCPEALTAPDAVDLGDLVAF 199

Query: 295 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 354
           Y+++K+RFD D  F+  A Q VV LQ  +PD   AW+++C  SRR+F+KIY+ L++ LTE
Sbjct: 200 YRQAKQRFDSDPDFQAIARQEVVRLQSGEPDSLHAWQLLCAQSRREFEKIYNLLDIKLTE 259

Query: 355 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDT 409
           RGESFY   + Q++  L++ GLL  D G K ++ E   +      P+ + KSDGG+ Y T
Sbjct: 260 RGESFYNPLLPQVIQALDQTGLLVEDQGAKCVFLEGYTNKAGDPQPLIVQKSDGGYIYAT 319

Query: 410 SDLAAIRQRIEEEKADWIVYVTD 432
           +DLAA+R RIE+++ADWI+YVTD
Sbjct: 320 TDLAALRYRIEQDQADWIIYVTD 342



 Score =  281 bits (718), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 148/323 (45%), Positives = 207/323 (64%), Gaps = 31/323 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N  + L K               ++IAS +   L     + +  +   +A PG
Sbjct: 38   KFGDYQSNAPLPLAKQLNQP---------PRTIASTIVDHL----EVGEAWEPPTIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N  L   Y   Q++       + ++ V+ P     LRV+VDFSSPNIAKEMHVGHLRS
Sbjct: 85   FINFTLKTSYLASQLELRLTDPRLGISAVKLP-----LRVVVDFSSPNIAKEMHVGHLRS 139

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAF 1311
            TIIGD ++R+LE+LGH+V+RLNHVGDWGTQFGMLI +L++  P+ LT    +   DL AF
Sbjct: 140  TIIGDCLARILEFLGHEVLRLNHVGDWGTQFGMLITYLREVCPEALTAPDAVDLGDLVAF 199

Query: 1312 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 1371
            Y+++K+RFD D  F+  A Q VV LQ  +PD   AW+++C  SRR+F+KIY+ L++ LTE
Sbjct: 200  YRQAKQRFDSDPDFQAIARQEVVRLQSGEPDSLHAWQLLCAQSRREFEKIYNLLDIKLTE 259

Query: 1372 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDT 1426
            RGESFY   + Q++  L++ GLL  D G K ++ E   +      P+ + KSDGG+ Y T
Sbjct: 260  RGESFYNPLLPQVIQALDQTGLLVEDQGAKCVFLEGYTNKAGDPQPLIVQKSDGGYIYAT 319

Query: 1427 SDLAAIRQRIEEEKADWIVYVTD 1449
            +DLAA+R RIE+++ADWI+YVTD
Sbjct: 320  TDLAALRYRIEQDQADWIIYVTD 342


>gi|427721165|ref|YP_007069159.1| arginyl-tRNA synthetase [Calothrix sp. PCC 7507]
 gi|427353601|gb|AFY36325.1| arginyl-tRNA synthetase [Calothrix sp. PCC 7507]
          Length = 585

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/567 (45%), Positives = 366/567 (64%), Gaps = 36/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N A++L K      +   P    ++IAS +  +L     ++++ +  E+A PG
Sbjct: 38   KFGDYQANVALSLSK-----RQGLQP----RAIASTIVEKL----DVSEICEPPEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L  VY   Q+  I ++   GV  PT     R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKPVYLEAQLTSIQIDPRLGV--PTAKTPQREIVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
            GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P  LT +    I DL +FY++
Sbjct: 143  GDSIARILEFRGHDVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANALDIGDLVSFYRK 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +K+RFD DE F++ A Q VV LQ    D   AW+M+C+ SRR+FQ IYD L+V LTERGE
Sbjct: 203  AKQRFDADETFQETARQEVVRLQAGAQDTIHAWKMLCEQSRREFQIIYDLLDVKLTERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   +  +V  L K GLL  + G + ++ E     +   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPGIVEDLAKSGLLVENQGAQCVFLEGFTNREGEPLPLIVQKSDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            A++R RI++++A  I+YVTD GQ  HF    + A+KAG + P    +  V FG+VLGED 
Sbjct: 323  ASLRYRIQQDEAKRIIYVTDTGQANHFAQFFQVARKAGWI-PEDVELVHVPFGLVLGEDG 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYAD 920
            KKFKTRSGDTV+L +LLDE + R+   L+++ +  E T TE  ++ A + +    +KYAD
Sbjct: 382  KKFKTRSGDTVRLRDLLDEAIVRARADLENRLQEYERTETEEFIAHASEVIGISAVKYAD 441

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  +Y+FS+DKML  +GNTA Y+LYAY R   I+R   I+ E +     +T + LE
Sbjct: 442  LSQNRTSNYIFSYDKMLSLKGNTAPYMLYAYVRTQGISREGNIDFEQM---GANTKILLE 498

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             + E  LAK LL++++V+  V +DL  + LCEYLY +S  F++FY+NC  ++ +     +
Sbjct: 499  TDTELTLAKHLLQLSEVIADVEQDLLPNRLCEYLYQLSDKFNKFYENCPVLQSE-----E 553

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIR 1067
             V T RL L   TA+ +K    +L I+
Sbjct: 554  PVRTSRLALCNLTARTLKLGLSLLGIQ 580



 Score =  281 bits (720), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 214/320 (66%), Gaps = 25/320 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N A++L K      +   P    ++IAS +  +L     ++++ +  E+A PG
Sbjct: 38  KFGDYQANVALSLSK-----RQGLQP----RAIASTIVEKL----DVSEICEPPEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L  VY   Q+  I ++   GV  PT     R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINLKLKPVYLEAQLTSIQIDPRLGV--PTAKTPQREIVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
           GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P  LT +    I DL +FY++
Sbjct: 143 GDSIARILEFRGHDVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANALDIGDLVSFYRK 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +K+RFD DE F++ A Q VV LQ    D   AW+M+C+ SRR+FQ IYD L+V LTERGE
Sbjct: 203 AKQRFDADETFQETARQEVVRLQAGAQDTIHAWKMLCEQSRREFQIIYDLLDVKLTERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   +  +V  L K GLL  + G + ++ E     +   +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPLLPGIVEDLAKSGLLVENQGAQCVFLEGFTNREGEPLPLIVQKSDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTD 432
           A++R RI++++A  I+YVTD
Sbjct: 323 ASLRYRIQQDEAKRIIYVTD 342



 Score =  281 bits (720), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 214/320 (66%), Gaps = 25/320 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N A++L K      +   P    ++IAS +  +L     ++++ +  E+A PG
Sbjct: 38   KFGDYQANVALSLSK-----RQGLQP----RAIASTIVEKL----DVSEICEPPEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L  VY   Q+  I ++   GV  PT     R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKPVYLEAQLTSIQIDPRLGV--PTAKTPQREIVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
            GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P  LT +    I DL +FY++
Sbjct: 143  GDSIARILEFRGHDVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANALDIGDLVSFYRK 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +K+RFD DE F++ A Q VV LQ    D   AW+M+C+ SRR+FQ IYD L+V LTERGE
Sbjct: 203  AKQRFDADETFQETARQEVVRLQAGAQDTIHAWKMLCEQSRREFQIIYDLLDVKLTERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   +  +V  L K GLL  + G + ++ E     +   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPGIVEDLAKSGLLVENQGAQCVFLEGFTNREGEPLPLIVQKSDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            A++R RI++++A  I+YVTD
Sbjct: 323  ASLRYRIQQDEAKRIIYVTD 342


>gi|172038489|ref|YP_001804990.1| arginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|354554166|ref|ZP_08973471.1| arginyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
 gi|226710999|sp|B1X0N5.1|SYR_CYAA5 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|171699943|gb|ACB52924.1| arginyl-tRNA-synthetase [Cyanothece sp. ATCC 51142]
 gi|353553845|gb|EHC23236.1| arginyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
          Length = 585

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/566 (44%), Positives = 366/566 (64%), Gaps = 36/566 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            + GD+Q N A+ L K        KNP +IAQ I +        N SL  + +   +  PG
Sbjct: 38   RHGDYQANIALPLAKKLG-----KNPREIAQIIIN--------NLSLNTICENPTIGGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   Y   Q+K +  N   G++   ++   +V+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKSSYLETQLKSLYQNQRLGIE--KVHNADKVIVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKE 687
            GD I+R LE+LG++V+RLNHVGDWGTQFGMLI +L++ +PD LT++    I DL  FYK+
Sbjct: 143  GDCIARTLEFLGYEVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADVLEIGDLVNFYKQ 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +KKRFDED  F++ A + VV LQ  D + +KAW+++CD SRR+FQKIYDRL+V L ERGE
Sbjct: 203  AKKRFDEDPKFQEAAREAVVKLQSGDEESRKAWQLLCDQSRREFQKIYDRLDVKLIERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 802
            SFY  ++  ++  L+++G+LE D G + ++ E   +     +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPYLNDVIKALDEQGILEKDQGAQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA++ RI+E+KA  I+YVTD GQ  HF  + + AKKA  L P+   +  V FG+V GED 
Sbjct: 323  AALKYRIQEDKAKRIIYVTDAGQSNHFAQVFQVAKKANFL-PDTVDVTHVPFGLVKGEDG 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYAD 920
            KK KTRSG+TVKL +LLDE +  +   L+++ +  +   +E  ++   + V    +KYAD
Sbjct: 382  KKLKTRSGETVKLKDLLDEAVNYARKDLENRLQAEDRKESEDFINHVAETVGISAVKYAD 441

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  DY+FS+DKML  +GNTA Y+LYAY RI SI+R   I+ E+L    ++  + L+
Sbjct: 442  LSQNRISDYIFSYDKMLALQGNTAPYMLYAYARIQSISREGNIDYENL---GENIQILLK 498

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             + E  L K LL++N+ +  V + L  + LC+YLY++S  F+ FY+NC  ++ D     +
Sbjct: 499  EDTEIELGKYLLQLNETIKEVEKSLLPNRLCDYLYELSKKFNRFYENCPVLKSD-----E 553

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNI 1066
             V T RLLL + TA+ +K    +L I
Sbjct: 554  PVKTSRLLLCDLTARTLKLGLSLLGI 579



 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/332 (47%), Positives = 221/332 (66%), Gaps = 28/332 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           + GD+Q N A+ L K        KNP +IAQ I +        N SL  + +   +  PG
Sbjct: 38  RHGDYQANIALPLAKKLG-----KNPREIAQIIIN--------NLSLNTICENPTIGGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   Y   Q+K +  N   G++   ++   +V+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINLKLKSSYLETQLKSLYQNQRLGIE--KVHNADKVIVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKE 297
           GD I+R LE+LG++V+RLNHVGDWGTQFGMLI +L++ +PD LT++    I DL  FYK+
Sbjct: 143 GDCIARTLEFLGYEVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADVLEIGDLVNFYKQ 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +KKRFDED  F++ A + VV LQ  D + +KAW+++CD SRR+FQKIYDRL+V L ERGE
Sbjct: 203 AKKRFDEDPKFQEAAREAVVKLQSGDEESRKAWQLLCDQSRREFQKIYDRLDVKLIERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 412
           SFY  ++  ++  L+++G+LE D G + ++ E   +     +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPYLNDVIKALDEQGILEKDQGAQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           AA++ RI+E+KA  I+YVTD      + QV Q
Sbjct: 323 AALKYRIQEDKAKRIIYVTDAGQSNHFAQVFQ 354



 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/332 (47%), Positives = 221/332 (66%), Gaps = 28/332 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            + GD+Q N A+ L K        KNP +IAQ I +        N SL  + +   +  PG
Sbjct: 38   RHGDYQANIALPLAKKLG-----KNPREIAQIIIN--------NLSLNTICENPTIGGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   Y   Q+K +  N   G++   ++   +V+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKSSYLETQLKSLYQNQRLGIE--KVHNADKVIVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKE 1314
            GD I+R LE+LG++V+RLNHVGDWGTQFGMLI +L++ +PD LT++    I DL  FYK+
Sbjct: 143  GDCIARTLEFLGYEVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADVLEIGDLVNFYKQ 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +KKRFDED  F++ A + VV LQ  D + +KAW+++CD SRR+FQKIYDRL+V L ERGE
Sbjct: 203  AKKRFDEDPKFQEAAREAVVKLQSGDEESRKAWQLLCDQSRREFQKIYDRLDVKLIERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 1429
            SFY  ++  ++  L+++G+LE D G + ++ E   +     +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPYLNDVIKALDEQGILEKDQGAQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            AA++ RI+E+KA  I+YVTD      + QV Q
Sbjct: 323  AALKYRIQEDKAKRIIYVTDAGQSNHFAQVFQ 354


>gi|302802969|ref|XP_002983238.1| hypothetical protein SELMODRAFT_155706 [Selaginella moellendorffii]
 gi|300148923|gb|EFJ15580.1| hypothetical protein SELMODRAFT_155706 [Selaginella moellendorffii]
          Length = 536

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/550 (46%), Positives = 348/550 (63%), Gaps = 26/550 (4%)

Query: 523  MALCKIFKDK-GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRV 581
            M +    K K  E +NP +IAQSI          N      ++   VA PGF+NV LS V
Sbjct: 1    MGIWSTIKGKETEFRNPREIAQSITR--------NFPQTGFVETTSVAGPGFINVKLSSV 52

Query: 582  YAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 639
            Y  +++ +++++G+    P L  K R +VDFSSPNIAKEMHVGHLRSTIIGD ++ ++EY
Sbjct: 53   YIAKRLNELLLHGIDTWAPVLPVK-RAIVDFSSPNIAKEMHVGHLRSTIIGDCLANMIEY 111

Query: 640  LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIF 698
               +V+R NHVGDWGTQFGMLI +L + FP++       I DLQAFYKESK RFD DE F
Sbjct: 112  CKVEVLRRNHVGDWGTQFGMLIEYLFEMFPNWEDIGDQAIGDLQAFYKESKVRFDADEEF 171

Query: 699  KKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLV 758
            K +A Q VV LQ  D  Y+ AW+++C++SR +FQ++YDRL V+L E+GESFY  ++   +
Sbjct: 172  KAKAQQAVVKLQSGDAKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPYIPDAI 231

Query: 759  PYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 818
              L  KG+LE  DG  +++  D   IP+  +K DGGF Y ++DLAA+  R+  EK +WI+
Sbjct: 232  QILRDKGILEESDGATVIF-VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEKVEWII 290

Query: 819  YVTDLGQGVHFRLLEECAKKAGIL-NPNKTRMDFVGFGVVLGEDRKKFKTRSG-DTVKLS 876
            YVTD+GQ  HF +  + AK+A  L      R   VGFG+VLG D K+F+TR G   V+L 
Sbjct: 291  YVTDVGQHQHFDMFFKAAKRAEWLPKEGYPRTQHVGFGLVLGTDGKRFRTRQGTGLVRLV 350

Query: 877  ELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKM 936
            +LLDE   RS   L ++ R  E +P +L  A ++V YG +KYADL +NR  +Y FSF++M
Sbjct: 351  DLLDEAKSRSKTALIERGRDDEWSPEDLDAAAESVGYGAVKYADLKNNRETNYTFSFEQM 410

Query: 937  LDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMND 996
            LD RGNTAVYLLYAY RI SI R +G + ++L+   ++  + L H  E AL   L++ ++
Sbjct: 411  LDVRGNTAVYLLYAYARIRSIIRKSGKSIDELK---ENGAIVLTHPDERALGLFLIQFSE 467

Query: 997  VLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
            V+      L  + LCEYLY++S  F+ FY +C       E       T RLLL EATA V
Sbjct: 468  VVEDAVTRLLPNTLCEYLYNLSENFTRFYTSCKVNGSPEE-------TSRLLLCEATAIV 520

Query: 1057 MKKCFDILNI 1066
            MK+CF +L I
Sbjct: 521  MKQCFKLLGI 530



 Score =  284 bits (726), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 153/328 (46%), Positives = 210/328 (64%), Gaps = 19/328 (5%)

Query: 133 MALCKIFKDK-GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRV 191
           M +    K K  E +NP +IAQSI          N      ++   VA PGF+NV LS V
Sbjct: 1   MGIWSTIKGKETEFRNPREIAQSITR--------NFPQTGFVETTSVAGPGFINVKLSSV 52

Query: 192 YAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 249
           Y  +++ +++++G+    P L  K R +VDFSSPNIAKEMHVGHLRSTIIGD ++ ++EY
Sbjct: 53  YIAKRLNELLLHGIDTWAPVLPVK-RAIVDFSSPNIAKEMHVGHLRSTIIGDCLANMIEY 111

Query: 250 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIF 308
              +V+R NHVGDWGTQFGMLI +L + FP++       I DLQAFYKESK RFD DE F
Sbjct: 112 CKVEVLRRNHVGDWGTQFGMLIEYLFEMFPNWEDIGDQAIGDLQAFYKESKVRFDADEEF 171

Query: 309 KKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLV 368
           K +A Q VV LQ  D  Y+ AW+++C++SR +FQ++YDRL V+L E+GESFY  ++   +
Sbjct: 172 KAKAQQAVVKLQSGDAKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPYIPDAI 231

Query: 369 PYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 428
             L  KG+LE  DG  +++  D   IP+  +K DGGF Y ++DLAA+  R+  EK +WI+
Sbjct: 232 QILRDKGILEESDGATVIF-VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEKVEWII 290

Query: 429 YVTD---HRSYHQVLQAI--AEEEKKQG 451
           YVTD   H+ +    +A   AE   K+G
Sbjct: 291 YVTDVGQHQHFDMFFKAAKRAEWLPKEG 318



 Score =  283 bits (724), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 147/304 (48%), Positives = 200/304 (65%), Gaps = 14/304 (4%)

Query: 1150 MALCKIFKDK-GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRV 1208
            M +    K K  E +NP +IAQSI          N      ++   VA PGF+NV LS V
Sbjct: 1    MGIWSTIKGKETEFRNPREIAQSITR--------NFPQTGFVETTSVAGPGFINVKLSSV 52

Query: 1209 YAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 1266
            Y  +++ +++++G+    P L  K R +VDFSSPNIAKEMHVGHLRSTIIGD ++ ++EY
Sbjct: 53   YIAKRLNELLLHGIDTWAPVLPVK-RAIVDFSSPNIAKEMHVGHLRSTIIGDCLANMIEY 111

Query: 1267 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIF 1325
               +V+R NHVGDWGTQFGMLI +L + FP++       I DLQAFYKESK RFD DE F
Sbjct: 112  CKVEVLRRNHVGDWGTQFGMLIEYLFEMFPNWEDIGDQAIGDLQAFYKESKVRFDADEEF 171

Query: 1326 KKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLV 1385
            K +A Q VV LQ  D  Y+ AW+++C++SR +FQ++YDRL V+L E+GESFY  ++   +
Sbjct: 172  KAKAQQAVVKLQSGDAKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPYIPDAI 231

Query: 1386 PYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 1445
              L  KG+LE  DG  +++  D   IP+  +K DGGF Y ++DLAA+  R+  EK +WI+
Sbjct: 232  QILRDKGILEESDGATVIF-VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEKVEWII 290

Query: 1446 YVTD 1449
            YVTD
Sbjct: 291  YVTD 294


>gi|67921649|ref|ZP_00515167.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501]
 gi|416385491|ref|ZP_11684788.1| Arginyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
 gi|67856761|gb|EAM52002.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501]
 gi|357264871|gb|EHJ13703.1| Arginyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
          Length = 585

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/601 (42%), Positives = 377/601 (62%), Gaps = 34/601 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+ + L+  F  A+  +F E         +T     H  GD+Q N A+ L K        
Sbjct: 3    SINEQLTKKFQEALVTSFGEDFQAIDPQVTTARDLRH--GDYQANIALPLAKKLG----- 55

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NG 594
            KNP +IAQ+I S        N ++  + +   +  PGF+N+ L   Y   ++K +    G
Sbjct: 56   KNPREIAQTIIS--------NLAVDTICETPTIGGPGFINLKLKPNYLENKLKSLYQEQG 107

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            +    +    +V+VDFSSPNIAKEMHVGHLRSTIIGD I+R LE+LG+DV+RLNHVGDWG
Sbjct: 108  LGIEKIPDSTQVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYDVLRLNHVGDWG 167

Query: 655  TQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            TQFGMLI +L++ +PD LT++    I DL  FYK++KKRFDED  F++RA + VV LQ  
Sbjct: 168  TQFGMLITYLKEVYPDALTQADALEIGDLVNFYKQAKKRFDEDTEFQQRAREAVVKLQSG 227

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            + +  +AWE++CD SRR+FQ+IYDRL+V LTERGESFY  +++ ++  L+ +G+L+ D G
Sbjct: 228  EQESSQAWELLCDQSRREFQQIYDRLDVKLTERGESFYNPYLDDVITALDAEGILKKDQG 287

Query: 773  RKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
             + ++ E   +     +P+ + KSDGG+ Y T+DLAA+R RI+E++A  I+YVTD GQ  
Sbjct: 288  AQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDLAALRYRIKEDQAKRIIYVTDAGQSN 347

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF  + + A KA  L P+   +  V FG+V GED KK KTRSG+T+KL +LL+E +  + 
Sbjct: 348  HFAQVFQVANKANFL-PDTVEVTHVPFGLVKGEDGKKLKTRSGETIKLKDLLNEAINYAR 406

Query: 888  DKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
              L+++ +  E   +E  ++   Q V    +KYADLS NR+ DY+FS+DKML  +GNTA 
Sbjct: 407  KDLENRLQSEERKESEDFINNVAQTVGISAVKYADLSQNRSSDYIFSYDKMLALQGNTAP 466

Query: 946  YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
            Y+LYAY RI SI+R   I+ E+L    ++  + L+ + E  L K LL++++ +  V + L
Sbjct: 467  YMLYAYARIQSISREGNIDYENL---GENIQIILKEDTEMELGKYLLQLSETIKEVEKTL 523

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILN 1065
              + LC+YLY++S  F+ FY+NC  ++ +   K     T RLLL + TAK +K    +L 
Sbjct: 524  LPNRLCDYLYELSKKFNRFYENCPVLKSEEPTK-----TSRLLLCDLTAKTLKLGLSLLG 578

Query: 1066 I 1066
            I
Sbjct: 579  I 579



 Score =  296 bits (759), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 162/367 (44%), Positives = 233/367 (63%), Gaps = 26/367 (7%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           S+ + L+  F  A+  +F E         +T     H  GD+Q N A+ L K        
Sbjct: 3   SINEQLTKKFQEALVTSFGEDFQAIDPQVTTARDLRH--GDYQANIALPLAKKLG----- 55

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NG 204
           KNP +IAQ+I S        N ++  + +   +  PGF+N+ L   Y   ++K +    G
Sbjct: 56  KNPREIAQTIIS--------NLAVDTICETPTIGGPGFINLKLKPNYLENKLKSLYQEQG 107

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           +    +    +V+VDFSSPNIAKEMHVGHLRSTIIGD I+R LE+LG+DV+RLNHVGDWG
Sbjct: 108 LGIEKIPDSTQVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYDVLRLNHVGDWG 167

Query: 265 TQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           TQFGMLI +L++ +PD LT++    I DL  FYK++KKRFDED  F++RA + VV LQ  
Sbjct: 168 TQFGMLITYLKEVYPDALTQADALEIGDLVNFYKQAKKRFDEDTEFQQRAREAVVKLQSG 227

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           + +  +AWE++CD SRR+FQ+IYDRL+V LTERGESFY  +++ ++  L+ +G+L+ D G
Sbjct: 228 EQESSQAWELLCDQSRREFQQIYDRLDVKLTERGESFYNPYLDDVITALDAEGILKKDQG 287

Query: 383 RKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HR 434
            + ++ E   +     +P+ + KSDGG+ Y T+DLAA+R RI+E++A  I+YVTD     
Sbjct: 288 AQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDLAALRYRIKEDQAKRIIYVTDAGQSN 347

Query: 435 SYHQVLQ 441
            + QV Q
Sbjct: 348 HFAQVFQ 354



 Score =  296 bits (759), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 162/367 (44%), Positives = 233/367 (63%), Gaps = 26/367 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+ + L+  F  A+  +F E         +T     H  GD+Q N A+ L K        
Sbjct: 3    SINEQLTKKFQEALVTSFGEDFQAIDPQVTTARDLRH--GDYQANIALPLAKKLG----- 55

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NG 1221
            KNP +IAQ+I S        N ++  + +   +  PGF+N+ L   Y   ++K +    G
Sbjct: 56   KNPREIAQTIIS--------NLAVDTICETPTIGGPGFINLKLKPNYLENKLKSLYQEQG 107

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            +    +    +V+VDFSSPNIAKEMHVGHLRSTIIGD I+R LE+LG+DV+RLNHVGDWG
Sbjct: 108  LGIEKIPDSTQVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYDVLRLNHVGDWG 167

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            TQFGMLI +L++ +PD LT++    I DL  FYK++KKRFDED  F++RA + VV LQ  
Sbjct: 168  TQFGMLITYLKEVYPDALTQADALEIGDLVNFYKQAKKRFDEDTEFQQRAREAVVKLQSG 227

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            + +  +AWE++CD SRR+FQ+IYDRL+V LTERGESFY  +++ ++  L+ +G+L+ D G
Sbjct: 228  EQESSQAWELLCDQSRREFQQIYDRLDVKLTERGESFYNPYLDDVITALDAEGILKKDQG 287

Query: 1400 RKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HR 1451
             + ++ E   +     +P+ + KSDGG+ Y T+DLAA+R RI+E++A  I+YVTD     
Sbjct: 288  AQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDLAALRYRIKEDQAKRIIYVTDAGQSN 347

Query: 1452 SYHQVLQ 1458
             + QV Q
Sbjct: 348  HFAQVFQ 354


>gi|428777978|ref|YP_007169765.1| arginyl-tRNA synthetase [Halothece sp. PCC 7418]
 gi|428692257|gb|AFZ45551.1| arginyl-tRNA synthetase [Halothece sp. PCC 7418]
          Length = 584

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 269/605 (44%), Positives = 378/605 (62%), Gaps = 43/605 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+ + L   F+ A+  AF E   +T  +     K   +FGD+Q N A++L K  K K   
Sbjct: 3    SLLEQLRQSFSQALVNAFGEDYAETDPLVVPAAK--PEFGDYQSNVALSLAKQLKQK--- 57

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
              P D AQ I          +  ++++ D  E+A PGF+N+ L        +++++    
Sbjct: 58   --PRDTAQQIID--------HLDISELCDPPEIAGPGFINLRLKPT----ALQNLLQTIA 103

Query: 596  QPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
            Q   L  +      RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+RLNHV
Sbjct: 104  QDSQLGAEKAETPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHDVLRLNHV 163

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            GDWGTQFGMLIA+L++ +P+ LTK+    I DL + Y+++KKRFDEDE F+K A + VV 
Sbjct: 164  GDWGTQFGMLIAYLREAYPEALTKADVLAIGDLVSLYRDAKKRFDEDEQFQKTAREEVVK 223

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQR +    +AW+++C+ SRR+FQ IYD L+V LTERGESFY   +  +V  LEK GLLE
Sbjct: 224  LQRGEETSVQAWKLLCEQSRREFQVIYDLLDVELTERGESFYNPFLSDVVQELEKTGLLE 283

Query: 769  LDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             D   K ++ E   +     +P+ + KSDGG+ Y T+DLAAIR RI E+ A  I+YVTD 
Sbjct: 284  EDQSAKCVFLEGFSNKSGERLPLIVQKSDGGYNYATTDLAAIRYRIREDGAQRIIYVTDA 343

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ  HF  + + AK+AG + P    +  V FG+V GED KK KTRSG+TV+L +LLDE +
Sbjct: 344  GQSNHFAQVFQVAKRAGWV-PETVELVHVPFGLVQGEDGKKLKTRSGETVRLRDLLDEAI 402

Query: 884  RRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
             RS   L+ +      + +E  + +  + V    +KYADLS NR  +YVFS+DKML  +G
Sbjct: 403  ARSRQDLEKRFAQEGRSESEEFIQKTARVVGISAVKYADLSRNRTSNYVFSYDKMLALQG 462

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
            NTA YLLYAY R+  I+R   I+   L  A QS  +SLE + EF LAK +L+++D+L  V
Sbjct: 463  NTAPYLLYAYVRVQGISRKGNIDFTTL--ANQS--LSLEDDSEFVLAKHILQLSDILKEV 518

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
             +DL  + LC+YL+++S  F++FYD C  ++ +   +     T RL+LA+ TA+ +K   
Sbjct: 519  EKDLLPNRLCQYLFELSQKFNQFYDRCPVLQAEEPKR-----TSRLMLADLTARTLKLGL 573

Query: 1062 DILNI 1066
             +L I
Sbjct: 574  SLLGI 578



 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/371 (45%), Positives = 231/371 (62%), Gaps = 34/371 (9%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           S+ + L   F+ A+  AF E   +T  +     K   +FGD+Q N A++L K  K K   
Sbjct: 3   SLLEQLRQSFSQALVNAFGEDYAETDPLVVPAAK--PEFGDYQSNVALSLAKQLKQK--- 57

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
             P D AQ I          +  ++++ D  E+A PGF+N+ L        +++++    
Sbjct: 58  --PRDTAQQIID--------HLDISELCDPPEIAGPGFINLRLKPT----ALQNLLQTIA 103

Query: 206 QPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
           Q   L  +      RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+RLNHV
Sbjct: 104 QDSQLGAEKAETPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHDVLRLNHV 163

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           GDWGTQFGMLIA+L++ +P+ LTK+    I DL + Y+++KKRFDEDE F+K A + VV 
Sbjct: 164 GDWGTQFGMLIAYLREAYPEALTKADVLAIGDLVSLYRDAKKRFDEDEQFQKTAREEVVK 223

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQR +    +AW+++C+ SRR+FQ IYD L+V LTERGESFY   +  +V  LEK GLLE
Sbjct: 224 LQRGEETSVQAWKLLCEQSRREFQVIYDLLDVELTERGESFYNPFLSDVVQELEKTGLLE 283

Query: 379 LDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD- 432
            D   K ++ E   +     +P+ + KSDGG+ Y T+DLAAIR RI E+ A  I+YVTD 
Sbjct: 284 EDQSAKCVFLEGFSNKSGERLPLIVQKSDGGYNYATTDLAAIRYRIREDGAQRIIYVTDA 343

Query: 433 --HRSYHQVLQ 441
                + QV Q
Sbjct: 344 GQSNHFAQVFQ 354



 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/371 (45%), Positives = 231/371 (62%), Gaps = 34/371 (9%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+ + L   F+ A+  AF E   +T  +     K   +FGD+Q N A++L K  K K   
Sbjct: 3    SLLEQLRQSFSQALVNAFGEDYAETDPLVVPAAK--PEFGDYQSNVALSLAKQLKQK--- 57

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
              P D AQ I          +  ++++ D  E+A PGF+N+ L        +++++    
Sbjct: 58   --PRDTAQQIID--------HLDISELCDPPEIAGPGFINLRLKPT----ALQNLLQTIA 103

Query: 1223 QPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
            Q   L  +      RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+RLNHV
Sbjct: 104  QDSQLGAEKAETPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHDVLRLNHV 163

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            GDWGTQFGMLIA+L++ +P+ LTK+    I DL + Y+++KKRFDEDE F+K A + VV 
Sbjct: 164  GDWGTQFGMLIAYLREAYPEALTKADVLAIGDLVSLYRDAKKRFDEDEQFQKTAREEVVK 223

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQR +    +AW+++C+ SRR+FQ IYD L+V LTERGESFY   +  +V  LEK GLLE
Sbjct: 224  LQRGEETSVQAWKLLCEQSRREFQVIYDLLDVELTERGESFYNPFLSDVVQELEKTGLLE 283

Query: 1396 LDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD- 1449
             D   K ++ E   +     +P+ + KSDGG+ Y T+DLAAIR RI E+ A  I+YVTD 
Sbjct: 284  EDQSAKCVFLEGFSNKSGERLPLIVQKSDGGYNYATTDLAAIRYRIREDGAQRIIYVTDA 343

Query: 1450 --HRSYHQVLQ 1458
                 + QV Q
Sbjct: 344  GQSNHFAQVFQ 354


>gi|187453153|emb|CAQ34913.1| arginyl-tRNA synthetase [Canavalia ensiformis]
          Length = 595

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/600 (43%), Positives = 379/600 (63%), Gaps = 29/600 (4%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            SV+  L+ +F  +++   P+  D    V +   K   KF D+QCN+AM+L    K K   
Sbjct: 10   SVKKQLAKLFEVSLRATVPDEPDVAPLVDACAAKSGVKFADYQCNNAMSLWAKIKGKQTG 69

Query: 536  -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             + P  + Q+I +        N   +++I+   +A PGFVN+ LS+ +  ++++ ++++G
Sbjct: 70   FRGPPALGQAIVA--------NLPQSEMIESCSIAGPGFVNIVLSKKWIAQRLEMMLIDG 121

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG-HDVVRLNHVG 651
            +    P L  K+ V+VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+     ++R NH+G
Sbjct: 122  IDTWAPRLPVKV-VMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFACVETLIRRNHLG 180

Query: 652  DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            DWGTQFGMLIAHL D +P+        I DLQAFYK SK RFD D  FK RA Q VV LQ
Sbjct: 181  DWGTQFGMLIAHLFDMYPNPEDVNETAIGDLQAFYKASKVRFDNDPEFKLRAQQSVVLLQ 240

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              D  Y+KAWE ICDVS+ +F+K+Y RL V +   GESF+   +   +  L+K GL+E  
Sbjct: 241  SGDKKYRKAWERICDVSKAEFEKVYKRLGVRVEAMGESFFNDLIPPTLEKLDKLGLIEDS 300

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            DG ++++ E   +IP+  VK DGG+ Y +SDLA++  R+  EK +W +YVTD+GQ  HF 
Sbjct: 301  DGARVIFVEGV-NIPIIAVKRDGGYNYFSSDLASLWYRLNVEKLEWNIYVTDVGQWQHFD 359

Query: 831  LLEECAKKAGILNPNKT---RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            +L +  ++AG L  ++    +   +GFG+VLGED K+F++RS +TV+L +LLDE  RR  
Sbjct: 360  MLFKAFRRAGWLPKDENDFPKCTHIGFGLVLGEDGKRFRSRSSETVRLVDLLDEAKRRCK 419

Query: 888  DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
              L +++   + +  E+ +  +A+ YG +KYADL  NR  +Y F+FD+ML+D+GNTAVYL
Sbjct: 420  SALLERDAAKDWSEEEIEKTSEAIGYGAVKYADLKINRLTNYTFNFDQMLNDKGNTAVYL 479

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            LYA+ RI SI R +G + E+L+   ++  + L HE E AL   L++  +V +    +L  
Sbjct: 480  LYAHARICSIIRKSGKDIEELK---KNGNIVLNHEDERALGLHLIQFPEVFVESLANLLP 536

Query: 1008 HHLCEYLYDISTAFS-EFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            + LCEYLY+++  F+ +FY NC  I    +       T RLLL EATA VM+KCF +L I
Sbjct: 537  NVLCEYLYNLTEIFTKKFYTNCQVIGSPEQ-------TSRLLLCEATATVMRKCFYLLGI 589



 Score =  282 bits (722), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 156/352 (44%), Positives = 223/352 (63%), Gaps = 15/352 (4%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           SV+  L+ +F  +++   P+  D    V +   K   KF D+QCN+AM+L    K K   
Sbjct: 10  SVKKQLAKLFEVSLRATVPDEPDVAPLVDACAAKSGVKFADYQCNNAMSLWAKIKGKQTG 69

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            + P  + Q+I +        N   +++I+   +A PGFVN+ LS+ +  ++++ ++++G
Sbjct: 70  FRGPPALGQAIVA--------NLPQSEMIESCSIAGPGFVNIVLSKKWIAQRLEMMLIDG 121

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG-HDVVRLNHVG 261
           +    P L  K+ V+VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+     ++R NH+G
Sbjct: 122 IDTWAPRLPVKV-VMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFACVETLIRRNHLG 180

Query: 262 DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           DWGTQFGMLIAHL D +P+        I DLQAFYK SK RFD D  FK RA Q VV LQ
Sbjct: 181 DWGTQFGMLIAHLFDMYPNPEDVNETAIGDLQAFYKASKVRFDNDPEFKLRAQQSVVLLQ 240

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             D  Y+KAWE ICDVS+ +F+K+Y RL V +   GESF+   +   +  L+K GL+E  
Sbjct: 241 SGDKKYRKAWERICDVSKAEFEKVYKRLGVRVEAMGESFFNDLIPPTLEKLDKLGLIEDS 300

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           DG ++++ E   +IP+  VK DGG+ Y +SDLA++  R+  EK +W +YVTD
Sbjct: 301 DGARVIFVEGV-NIPIIAVKRDGGYNYFSSDLASLWYRLNVEKLEWNIYVTD 351



 Score =  282 bits (722), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 156/352 (44%), Positives = 223/352 (63%), Gaps = 15/352 (4%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            SV+  L+ +F  +++   P+  D    V +   K   KF D+QCN+AM+L    K K   
Sbjct: 10   SVKKQLAKLFEVSLRATVPDEPDVAPLVDACAAKSGVKFADYQCNNAMSLWAKIKGKQTG 69

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             + P  + Q+I +        N   +++I+   +A PGFVN+ LS+ +  ++++ ++++G
Sbjct: 70   FRGPPALGQAIVA--------NLPQSEMIESCSIAGPGFVNIVLSKKWIAQRLEMMLIDG 121

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG-HDVVRLNHVG 1278
            +    P L  K+ V+VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+     ++R NH+G
Sbjct: 122  IDTWAPRLPVKV-VMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFACVETLIRRNHLG 180

Query: 1279 DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            DWGTQFGMLIAHL D +P+        I DLQAFYK SK RFD D  FK RA Q VV LQ
Sbjct: 181  DWGTQFGMLIAHLFDMYPNPEDVNETAIGDLQAFYKASKVRFDNDPEFKLRAQQSVVLLQ 240

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              D  Y+KAWE ICDVS+ +F+K+Y RL V +   GESF+   +   +  L+K GL+E  
Sbjct: 241  SGDKKYRKAWERICDVSKAEFEKVYKRLGVRVEAMGESFFNDLIPPTLEKLDKLGLIEDS 300

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DG ++++ E   +IP+  VK DGG+ Y +SDLA++  R+  EK +W +YVTD
Sbjct: 301  DGARVIFVEGV-NIPIIAVKRDGGYNYFSSDLASLWYRLNVEKLEWNIYVTD 351


>gi|427713510|ref|YP_007062134.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 6312]
 gi|427377639|gb|AFY61591.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 6312]
          Length = 585

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/596 (44%), Positives = 366/596 (61%), Gaps = 50/596 (8%)

Query: 472  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            R R+++ D L D      QVA P++    AS          +FGD+Q N  + L      
Sbjct: 11   RFRIALVDVLGD------QVALPDVVVGPASQP--------QFGDYQSNVCLVL-----G 51

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            K  K+NP  +AQS+   +         LA + +  E+A PGF+N+ L   Y   +I   +
Sbjct: 52   KAVKQNPRALAQSLIEKL--------DLADICEPPEIAGPGFINLRLLPSYLAREITPKL 103

Query: 592  VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             +   GV P  +   L+V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+RLN
Sbjct: 104  GDQRLGVAP--VISPLKVVVDFSSPNIAKEMHVGHLRSTIIGDAIARILEFQGHDVLRLN 161

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            HVGDWGTQFGMLI HL+  +PD LT      + DL +FYK++K+RFD +  F+  A + V
Sbjct: 162  HVGDWGTQFGMLITHLRTAYPDALTTPDALDLGDLVSFYKQAKQRFDLEPAFQIAAREEV 221

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ+ D   ++AWE++C  SRR+FQKIYD L++ LTERGESFY   +  +V  L+ +GL
Sbjct: 222  VKLQQGDTTSRQAWELLCQQSRREFQKIYDLLDIRLTERGESFYNPLLASVVADLKTQGL 281

Query: 767  LELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
            L  D G + ++ E     +    P+ I KSDGGF Y T+DLAAIR R+ +++A W++YVT
Sbjct: 282  LVEDQGAQCVFLEGFTNKEGDPQPLIIQKSDGGFNYATTDLAAIRYRVTQDQAQWLIYVT 341

Query: 822  DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
            D GQ  HF  + + A++AG L P   +++ + FG+VLG + K+ KTRSGDT++L ELLDE
Sbjct: 342  DAGQSTHFAQVFQVARRAGWLPPT-VKVEHIPFGLVLGAEGKRLKTRSGDTIRLQELLDE 400

Query: 882  GLRRSLDKLKDK--NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDD 939
             + R+   L+ +      + +P  + E  Q +  G +KYADLS NRN +YVFSFDKML  
Sbjct: 401  AIERAKTDLRSRLDIEGRQESPDFIEEVAQVIGLGAVKYADLSQNRNSNYVFSFDKMLSL 460

Query: 940  RGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLM 999
            +GNTA YL+YAY RI  I R   IN   L   A    + L  + E ALAK LL+  D+L 
Sbjct: 461  QGNTAPYLIYAYVRIQGIIRKGEINFATL---APHLELCLGDDTELALAKHLLQFADILS 517

Query: 1000 LVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAK 1055
            LVT++L  + LC+YL+++S  F++FYD C  +      +     T RL L + TA+
Sbjct: 518  LVTQELLPNRLCQYLFELSQKFNQFYDRCPVLNSPEPER-----TSRLALCQLTAQ 568



 Score =  290 bits (742), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 169/373 (45%), Positives = 231/373 (61%), Gaps = 42/373 (11%)

Query: 82  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           R R+++ D L D      QVA P++    AS          +FGD+Q N  + L      
Sbjct: 11  RFRIALVDVLGD------QVALPDVVVGPASQP--------QFGDYQSNVCLVL-----G 51

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
           K  K+NP  +AQS+   +         LA + +  E+A PGF+N+ L   Y   +I   +
Sbjct: 52  KAVKQNPRALAQSLIEKL--------DLADICEPPEIAGPGFINLRLLPSYLAREITPKL 103

Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +   GV P  +   L+V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+RLN
Sbjct: 104 GDQRLGVAP--VISPLKVVVDFSSPNIAKEMHVGHLRSTIIGDAIARILEFQGHDVLRLN 161

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           HVGDWGTQFGMLI HL+  +PD LT      + DL +FYK++K+RFD +  F+  A + V
Sbjct: 162 HVGDWGTQFGMLITHLRTAYPDALTTPDALDLGDLVSFYKQAKQRFDLEPAFQIAAREEV 221

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ+ D   ++AWE++C  SRR+FQKIYD L++ LTERGESFY   +  +V  L+ +GL
Sbjct: 222 VKLQQGDTTSRQAWELLCQQSRREFQKIYDLLDIRLTERGESFYNPLLASVVADLKTQGL 281

Query: 377 LELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
           L  D G + ++ E     +    P+ I KSDGGF Y T+DLAAIR R+ +++A W++YVT
Sbjct: 282 LVEDQGAQCVFLEGFTNKEGDPQPLIIQKSDGGFNYATTDLAAIRYRVTQDQAQWLIYVT 341

Query: 432 DH-RSYH--QVLQ 441
           D  +S H  QV Q
Sbjct: 342 DAGQSTHFAQVFQ 354



 Score =  290 bits (742), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 169/373 (45%), Positives = 231/373 (61%), Gaps = 42/373 (11%)

Query: 1099 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            R R+++ D L D      QVA P++    AS          +FGD+Q N  + L      
Sbjct: 11   RFRIALVDVLGD------QVALPDVVVGPASQP--------QFGDYQSNVCLVL-----G 51

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            K  K+NP  +AQS+   +         LA + +  E+A PGF+N+ L   Y   +I   +
Sbjct: 52   KAVKQNPRALAQSLIEKL--------DLADICEPPEIAGPGFINLRLLPSYLAREITPKL 103

Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             +   GV P  +   L+V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+RLN
Sbjct: 104  GDQRLGVAP--VISPLKVVVDFSSPNIAKEMHVGHLRSTIIGDAIARILEFQGHDVLRLN 161

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            HVGDWGTQFGMLI HL+  +PD LT      + DL +FYK++K+RFD +  F+  A + V
Sbjct: 162  HVGDWGTQFGMLITHLRTAYPDALTTPDALDLGDLVSFYKQAKQRFDLEPAFQIAAREEV 221

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ+ D   ++AWE++C  SRR+FQKIYD L++ LTERGESFY   +  +V  L+ +GL
Sbjct: 222  VKLQQGDTTSRQAWELLCQQSRREFQKIYDLLDIRLTERGESFYNPLLASVVADLKTQGL 281

Query: 1394 LELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
            L  D G + ++ E     +    P+ I KSDGGF Y T+DLAAIR R+ +++A W++YVT
Sbjct: 282  LVEDQGAQCVFLEGFTNKEGDPQPLIIQKSDGGFNYATTDLAAIRYRVTQDQAQWLIYVT 341

Query: 1449 DH-RSYH--QVLQ 1458
            D  +S H  QV Q
Sbjct: 342  DAGQSTHFAQVFQ 354


>gi|427731652|ref|YP_007077889.1| arginyl-tRNA synthetase [Nostoc sp. PCC 7524]
 gi|427367571|gb|AFY50292.1| arginyl-tRNA synthetase [Nostoc sp. PCC 7524]
          Length = 588

 Score =  465 bits (1196), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/565 (45%), Positives = 361/565 (63%), Gaps = 31/565 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N A++L K    +          + IAS +  +L     ++++ +  E+A PG
Sbjct: 38   KFGDYQANVALSLSKKLGQQ---------PRVIASAIVEKL----DVSEICESPEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            F+N+ L   Y   Q+  I  +  +  PT     R +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85   FINLKLKTAYLEAQLNAIHADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 689
            +I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT +    I DL +FY+++K
Sbjct: 145  SIARILEFRGHDVLRLNHVGDWGTQFGMLIAYLREVYPEALTTANALDIGDLVSFYRKAK 204

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 749
            +RFD DE F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD LN+ LTERGESF
Sbjct: 205  QRFDADEAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRQEFQVIYDLLNIQLTERGESF 264

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  LEK GLL  + G K ++       +   +P+ + KSDGG+ Y T+DLAA
Sbjct: 265  YNPLLPTVVEGLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +  RI++++A  I+YVTD GQ  HF    + A+KAG + P+   +  V FG+VLGED KK
Sbjct: 325  LNYRIQKDEAKRIIYVTDAGQANHFSQFFQVARKAGWI-PDDVELVHVPFGLVLGEDGKK 383

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKD--KNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            FKTRSGDTV+L +LLDE + R+   L+   K    E T   +++  + V    +KYADLS
Sbjct: 384  FKTRSGDTVRLRDLLDEAVSRAHADLETRLKAEEREETAEFINKVAEVVGISAVKYADLS 443

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  +Y+FS+DKMLD +GNTA Y+LYAY RI  I+R  GIN  +L     +  V L+H+
Sbjct: 444  QNRTSNYIFSYDKMLDLKGNTAPYMLYAYARIQGISRKGGINFAEL---GSNAKVILQHD 500

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK-DAEGKIKT 1041
             EFALAK LL++ +V+  V  DL  + LCEYLY++S  F+ FYD    +   +AE   + 
Sbjct: 501  TEFALAKFLLQLGEVISTVEEDLLPNRLCEYLYELSKKFNVFYDRNQGVPVLNAE---EP 557

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNI 1066
            + T RL+L + TA+ +K    +L I
Sbjct: 558  LRTSRLVLCDLTARTLKLGLSLLGI 582



 Score =  280 bits (716), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 209/318 (65%), Gaps = 21/318 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N A++L K    +          + IAS +  +L     ++++ +  E+A PG
Sbjct: 38  KFGDYQANVALSLSKKLGQQ---------PRVIASAIVEKL----DVSEICESPEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           F+N+ L   Y   Q+  I  +  +  PT     R +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85  FINLKLKTAYLEAQLNAIHADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 299
           +I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT +    I DL +FY+++K
Sbjct: 145 SIARILEFRGHDVLRLNHVGDWGTQFGMLIAYLREVYPEALTTANALDIGDLVSFYRKAK 204

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 359
           +RFD DE F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD LN+ LTERGESF
Sbjct: 205 QRFDADEAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRQEFQVIYDLLNIQLTERGESF 264

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  LEK GLL  + G K ++       +   +P+ + KSDGG+ Y T+DLAA
Sbjct: 265 YNPLLPTVVEGLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324

Query: 415 IRQRIEEEKADWIVYVTD 432
           +  RI++++A  I+YVTD
Sbjct: 325 LNYRIQKDEAKRIIYVTD 342



 Score =  280 bits (716), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 209/318 (65%), Gaps = 21/318 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N A++L K    +          + IAS +  +L     ++++ +  E+A PG
Sbjct: 38   KFGDYQANVALSLSKKLGQQ---------PRVIASAIVEKL----DVSEICESPEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            F+N+ L   Y   Q+  I  +  +  PT     R +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85   FINLKLKTAYLEAQLNAIHADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 1316
            +I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT +    I DL +FY+++K
Sbjct: 145  SIARILEFRGHDVLRLNHVGDWGTQFGMLIAYLREVYPEALTTANALDIGDLVSFYRKAK 204

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 1376
            +RFD DE F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD LN+ LTERGESF
Sbjct: 205  QRFDADEAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRQEFQVIYDLLNIQLTERGESF 264

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  LEK GLL  + G K ++       +   +P+ + KSDGG+ Y T+DLAA
Sbjct: 265  YNPLLPTVVEGLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324

Query: 1432 IRQRIEEEKADWIVYVTD 1449
            +  RI++++A  I+YVTD
Sbjct: 325  LNYRIQKDEAKRIIYVTD 342


>gi|299471588|emb|CBN79450.1| Arginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 616

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 264/601 (43%), Positives = 364/601 (60%), Gaps = 40/601 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S RD + D    A+  AF E    +  + ++  K   +FGD+QCN AMAL K  K K   
Sbjct: 26   SPRDTIVDAVREALVDAFGEKFRDSRPLVTSATK--PEFGDYQCNAAMALAKPLKCK--- 80

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG- 594
              P D+A S+A  +       P L+ + +  E+A PGF+N+ L   +   ++K ++ +G 
Sbjct: 81   --PRDVASSLAEKL------GPRLSAICEAPEIAGPGFINLRLRDGFVAAKVKSMVGDGE 132

Query: 595  -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
             +  P +    RV+VDFSSPNIAKEMHVGHLRSTIIGDTI R+LE+ GHDVVRLNHVGDW
Sbjct: 133  RLGVPRVTNPERVVVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFRGHDVVRLNHVGDW 192

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPP----IADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            GTQFGMLI+HL++  P+ +         + DL  FYKE+K RFDED+ FK+ A   VV L
Sbjct: 193  GTQFGMLISHLKEVAPEAIEDGAEDKFNVGDLVTFYKEAKARFDEDDGFKEIARAEVVKL 252

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  D + K+AW ++C+ SRR FQ IY  L V L ERGESFY   +  +V  LE +GLLE 
Sbjct: 253  QAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEE 312

Query: 770  DDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLG 824
             DG K+++ E     D  S P+ + KSDGGF Y T+DLAAIR R+  E+AD ++YV D+G
Sbjct: 313  SDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVG 372

Query: 825  QGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
            QG HF  + + A++AG   P   ++  V FG+V GED KKFKTR+G+TVKLS+LL E +R
Sbjct: 373  QGSHFAQVFQVARRAG-FAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVR 431

Query: 885  RSLDKLKDKNRHTE------LTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
             + + ++ K R  E          EL    + V  G +KYADLS NR  +Y FS+ KML 
Sbjct: 432  IAGESIR-KRREEEGGEGYQADEVELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLS 490

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
             +GNTA Y+LYA+ R+  I + A     DL      T +S+   +E ALA+ LLR+ +VL
Sbjct: 491  LQGNTAPYMLYAFARVQGIKKKATEGLGDL----SGTEISMGTPEEAALARMLLRLPEVL 546

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
              +  DL  H LC+Y++++S+ F+ FY+NC        G+ +     R      TA V++
Sbjct: 547  EDLEVDLFPHRLCDYMFELSSQFNRFYENCPV----NTGETEEFKGSRTAFCSGTADVIE 602

Query: 1059 K 1059
            +
Sbjct: 603  R 603



 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 173/370 (46%), Positives = 229/370 (61%), Gaps = 27/370 (7%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           S RD + D    A+  AF E    +  + ++  K   +FGD+QCN AMAL K  K K   
Sbjct: 26  SPRDTIVDAVREALVDAFGEKFRDSRPLVTSATK--PEFGDYQCNAAMALAKPLKCK--- 80

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG- 204
             P D+A S+A  +       P L+ + +  E+A PGF+N+ L   +   ++K ++ +G 
Sbjct: 81  --PRDVASSLAEKL------GPRLSAICEAPEIAGPGFINLRLRDGFVAAKVKSMVGDGE 132

Query: 205 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
            +  P +    RV+VDFSSPNIAKEMHVGHLRSTIIGDTI R+LE+ GHDVVRLNHVGDW
Sbjct: 133 RLGVPRVTNPERVVVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFRGHDVVRLNHVGDW 192

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPP----IADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           GTQFGMLI+HL++  P+ +         + DL  FYKE+K RFDED+ FK+ A   VV L
Sbjct: 193 GTQFGMLISHLKEVAPEAIEDGAEDKFNVGDLVTFYKEAKARFDEDDGFKEIARAEVVKL 252

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 379
           Q  D + K+AW ++C+ SRR FQ IY  L V L ERGESFY   +  +V  LE +GLLE 
Sbjct: 253 QAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEE 312

Query: 380 DDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-- 432
            DG K+++ E     D  S P+ + KSDGGF Y T+DLAAIR R+  E+AD ++YV D  
Sbjct: 313 SDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVG 372

Query: 433 -HRSYHQVLQ 441
               + QV Q
Sbjct: 373 QGSHFAQVFQ 382



 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 173/370 (46%), Positives = 229/370 (61%), Gaps = 27/370 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S RD + D    A+  AF E    +  + ++  K   +FGD+QCN AMAL K  K K   
Sbjct: 26   SPRDTIVDAVREALVDAFGEKFRDSRPLVTSATK--PEFGDYQCNAAMALAKPLKCK--- 80

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG- 1221
              P D+A S+A  +       P L+ + +  E+A PGF+N+ L   +   ++K ++ +G 
Sbjct: 81   --PRDVASSLAEKL------GPRLSAICEAPEIAGPGFINLRLRDGFVAAKVKSMVGDGE 132

Query: 1222 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
             +  P +    RV+VDFSSPNIAKEMHVGHLRSTIIGDTI R+LE+ GHDVVRLNHVGDW
Sbjct: 133  RLGVPRVTNPERVVVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFRGHDVVRLNHVGDW 192

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPP----IADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            GTQFGMLI+HL++  P+ +         + DL  FYKE+K RFDED+ FK+ A   VV L
Sbjct: 193  GTQFGMLISHLKEVAPEAIEDGAEDKFNVGDLVTFYKEAKARFDEDDGFKEIARAEVVKL 252

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  D + K+AW ++C+ SRR FQ IY  L V L ERGESFY   +  +V  LE +GLLE 
Sbjct: 253  QAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEE 312

Query: 1397 DDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-- 1449
             DG K+++ E     D  S P+ + KSDGGF Y T+DLAAIR R+  E+AD ++YV D  
Sbjct: 313  SDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVG 372

Query: 1450 -HRSYHQVLQ 1458
                + QV Q
Sbjct: 373  QGSHFAQVFQ 382


>gi|17231209|ref|NP_487757.1| arginyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|23822197|sp|Q8YQU9.1|SYR_NOSS1 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|17132851|dbj|BAB75416.1| arginyl-tRNA-synthetase [Nostoc sp. PCC 7120]
          Length = 588

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/569 (45%), Positives = 363/569 (63%), Gaps = 35/569 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N A++L K    +          ++IAS +  +L     ++++ +K E+A PG
Sbjct: 38   KFGDYQANVALSLSKKLGQQ---------PRAIASAIVEKL----DVSEICEKPEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   Y   Q+  I  +   GV  PT     R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKTAYLEAQLNTIQADTRLGV--PTAKHPQREIVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
            GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +    I DL +FY++
Sbjct: 143  GDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQ 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +K+RFD DE F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD L+V LTERGE
Sbjct: 203  AKQRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   +  +V  LEK GLL  + G K ++       +   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R RI++++A  I+Y+TD GQ  HF    + A+KAG + P+   +  V FG+VLGED 
Sbjct: 323  AALRYRIQKDEAKRIIYITDAGQANHFAQFFQVARKAGWI-PDDVELVHVPFGLVLGEDG 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLD--KLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            KKFKTRSGDTV+L +LLDE + R+    +++ K    E T   + +  + V    +KYAD
Sbjct: 382  KKFKTRSGDTVRLRDLLDEAISRAHADVEVRLKAEEREETAEFIDKVAEVVGISAVKYAD 441

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  +Y+FS+DKMLD +GNTA Y+LYAY RI  I+R   IN  DL     +  V L+
Sbjct: 442  LSQNRTSNYIFSYDKMLDLKGNTAPYMLYAYARIQGISRKGEINFADL---GDNAKVILQ 498

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK-DAEGKI 1039
            HE EFALAK LL++ +V+  V  DL  + LCEYLY++S  F+ FYD    ++   AE   
Sbjct: 499  HETEFALAKYLLQLGEVISTVEEDLSPNRLCEYLYELSKRFNAFYDRNQGVQVLSAE--- 555

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            + + T RL+L + TA+ +K    +L I+ 
Sbjct: 556  EPLRTSRLVLCDLTARTLKLGLSLLGIQV 584



 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 211/320 (65%), Gaps = 25/320 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N A++L K    +          ++IAS +  +L     ++++ +K E+A PG
Sbjct: 38  KFGDYQANVALSLSKKLGQQ---------PRAIASAIVEKL----DVSEICEKPEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   Y   Q+  I  +   GV  PT     R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINLKLKTAYLEAQLNTIQADTRLGV--PTAKHPQREIVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
           GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +    I DL +FY++
Sbjct: 143 GDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQ 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +K+RFD DE F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD L+V LTERGE
Sbjct: 203 AKQRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   +  +V  LEK GLL  + G K ++       +   +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTD 432
           AA+R RI++++A  I+Y+TD
Sbjct: 323 AALRYRIQKDEAKRIIYITD 342



 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 211/320 (65%), Gaps = 25/320 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N A++L K    +          ++IAS +  +L     ++++ +K E+A PG
Sbjct: 38   KFGDYQANVALSLSKKLGQQ---------PRAIASAIVEKL----DVSEICEKPEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   Y   Q+  I  +   GV  PT     R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKTAYLEAQLNTIQADTRLGV--PTAKHPQREIVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
            GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +    I DL +FY++
Sbjct: 143  GDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQ 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +K+RFD DE F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD L+V LTERGE
Sbjct: 203  AKQRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   +  +V  LEK GLL  + G K ++       +   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            AA+R RI++++A  I+Y+TD
Sbjct: 323  AALRYRIQKDEAKRIIYITD 342


>gi|325188174|emb|CCA22714.1| arginyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 803

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/587 (43%), Positives = 354/587 (60%), Gaps = 18/587 (3%)

Query: 484  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIA 542
            +F  A+  AFP L    A V  T  K   +FGD+QCN AM++    K      K+P D+A
Sbjct: 225  LFQKAIDSAFPGLHPAVAVVDVTRTKNA-QFGDYQCNSAMSIFTAMKGTPNALKSPRDVA 283

Query: 543  QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNK 602
             +I + +      NP L     ++ VA  GF+N  L   +   ++  ++ +G Q      
Sbjct: 284  NAIINAMKQ--IENPVLQS---ELTVAGAGFINARLEPSFLSARLVSLLKHGAQASPETN 338

Query: 603  KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 662
            +++V+VDFSSPNIAK+MHVGHLRSTIIGD I R+LE+ G+DV R+NHVGDWGTQFGMLI 
Sbjct: 339  RIKVVVDFSSPNIAKDMHVGHLRSTIIGDAICRILEFQGYDVARINHVGDWGTQFGMLIC 398

Query: 663  HLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEM 722
            HL D +P + ++ P + DL   YK +K+RFD+DE F++R+   VV LQ  D      WE+
Sbjct: 399  HLIDAYPTWESEQPNVTDLTKLYKAAKERFDQDEAFRQRSKDQVVLLQSGDSHSHHVWEI 458

Query: 723  ICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG 782
            +CD+SR+++QK+YDRL V LTE GES+Y  ++  ++  LEKKG+ E  DG  +++ +   
Sbjct: 459  LCDISRKEYQKVYDRLQVNLTEMGESYYNPYIPGVIERLEKKGITENSDGALVVFTKQFK 518

Query: 783  SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL 842
              P  + KSDG   YDT+D+AA+  RI E +A WI+Y TD  Q  HF LL E A+  GIL
Sbjct: 519  Q-PFMLRKSDGSSLYDTTDIAALWYRIHEMQAAWIIYYTDYTQNDHFSLLFEVARMGGIL 577

Query: 843  NPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELT 900
            +P K R++ +GFG V  E  K+FKTRSG+ V+L ELLDE   R   +L D+     T L 
Sbjct: 578  DPAKHRVNHIGFGTVNDESGKRFKTRSGEVVRLVELLDEAKERMKTQLLDRIQGGQTSLP 637

Query: 901  PTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIART 960
              ++  A + + YG +KY DL  +    YVFS+D+ML   G+TAVYLL+AY R++SI R 
Sbjct: 638  ADQVDTAAEKIGYGAVKYFDLRQSPTSSYVFSYDRMLSTNGDTAVYLLFAYARLSSIIRK 697

Query: 961  AGIN-SEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIST 1019
            AGI+ +  +  A  S  + + H  E ALA  LL+  D+L L+ RDL  + LC YLY IS 
Sbjct: 698  AGIDIASKVSSADPSMALPVVHPCELALALELLQFQDILKLINRDLSTNRLCSYLYTISE 757

Query: 1020 AFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
                F   C  I  + +         RL L +AT  VM++CF +L I
Sbjct: 758  KVQTFLTQCRVIGCEEQ-------ENRLFLCQATVNVMQRCFCLLGI 797



 Score =  299 bits (765), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 151/341 (44%), Positives = 215/341 (63%), Gaps = 8/341 (2%)

Query: 94  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIA 152
           +F  A+  AFP L    A V  T  K   +FGD+QCN AM++    K      K+P D+A
Sbjct: 225 LFQKAIDSAFPGLHPAVAVVDVTRTKNA-QFGDYQCNSAMSIFTAMKGTPNALKSPRDVA 283

Query: 153 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNK 212
            +I + +      NP L     ++ VA  GF+N  L   +   ++  ++ +G Q      
Sbjct: 284 NAIINAMKQ--IENPVLQS---ELTVAGAGFINARLEPSFLSARLVSLLKHGAQASPETN 338

Query: 213 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 272
           +++V+VDFSSPNIAK+MHVGHLRSTIIGD I R+LE+ G+DV R+NHVGDWGTQFGMLI 
Sbjct: 339 RIKVVVDFSSPNIAKDMHVGHLRSTIIGDAICRILEFQGYDVARINHVGDWGTQFGMLIC 398

Query: 273 HLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEM 332
           HL D +P + ++ P + DL   YK +K+RFD+DE F++R+   VV LQ  D      WE+
Sbjct: 399 HLIDAYPTWESEQPNVTDLTKLYKAAKERFDQDEAFRQRSKDQVVLLQSGDSHSHHVWEI 458

Query: 333 ICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG 392
           +CD+SR+++QK+YDRL V LTE GES+Y  ++  ++  LEKKG+ E  DG  +++ +   
Sbjct: 459 LCDISRKEYQKVYDRLQVNLTEMGESYYNPYIPGVIERLEKKGITENSDGALVVFTKQFK 518

Query: 393 SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             P  + KSDG   YDT+D+AA+  RI E +A WI+Y TD+
Sbjct: 519 Q-PFMLRKSDGSSLYDTTDIAALWYRIHEMQAAWIIYYTDY 558



 Score =  299 bits (765), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 151/341 (44%), Positives = 215/341 (63%), Gaps = 8/341 (2%)

Query: 1111 VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIA 1169
            +F  A+  AFP L    A V  T  K   +FGD+QCN AM++    K      K+P D+A
Sbjct: 225  LFQKAIDSAFPGLHPAVAVVDVTRTKNA-QFGDYQCNSAMSIFTAMKGTPNALKSPRDVA 283

Query: 1170 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNK 1229
             +I + +      NP L     ++ VA  GF+N  L   +   ++  ++ +G Q      
Sbjct: 284  NAIINAMKQ--IENPVLQS---ELTVAGAGFINARLEPSFLSARLVSLLKHGAQASPETN 338

Query: 1230 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 1289
            +++V+VDFSSPNIAK+MHVGHLRSTIIGD I R+LE+ G+DV R+NHVGDWGTQFGMLI 
Sbjct: 339  RIKVVVDFSSPNIAKDMHVGHLRSTIIGDAICRILEFQGYDVARINHVGDWGTQFGMLIC 398

Query: 1290 HLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEM 1349
            HL D +P + ++ P + DL   YK +K+RFD+DE F++R+   VV LQ  D      WE+
Sbjct: 399  HLIDAYPTWESEQPNVTDLTKLYKAAKERFDQDEAFRQRSKDQVVLLQSGDSHSHHVWEI 458

Query: 1350 ICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG 1409
            +CD+SR+++QK+YDRL V LTE GES+Y  ++  ++  LEKKG+ E  DG  +++ +   
Sbjct: 459  LCDISRKEYQKVYDRLQVNLTEMGESYYNPYIPGVIERLEKKGITENSDGALVVFTKQFK 518

Query: 1410 SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              P  + KSDG   YDT+D+AA+  RI E +A WI+Y TD+
Sbjct: 519  Q-PFMLRKSDGSSLYDTTDIAALWYRIHEMQAAWIIYYTDY 558


>gi|428211390|ref|YP_007084534.1| arginyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
 gi|427999771|gb|AFY80614.1| arginyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
          Length = 585

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 267/607 (43%), Positives = 377/607 (62%), Gaps = 44/607 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            S  + L +    A+  AF E   G     V +TN K    FGD+Q N AM+L K  K K 
Sbjct: 3    STNELLRNQVEKALIAAFGEEMAGTDPVLVPTTNPK----FGDYQANLAMSLAKPLKQK- 57

Query: 534  EKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
                P DIAQ I  ++  SE    P         E+A PGF+N  L   Y  +Q+  I  
Sbjct: 58   ----PRDIAQKIIDNIDVSEFCEPP---------EIAGPGFINFTLKPSYLEQQLAAIEG 104

Query: 593  N---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            +   G++P  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GHDV+RLNH
Sbjct: 105  DERLGIEP--VSHPQRVVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFWGHDVLRLNH 162

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            VGDWGTQFGMLI +L++  PD LT +    + DL AFYK++KKRFD+DE F++ + Q VV
Sbjct: 163  VGDWGTQFGMLITYLREVSPDALTTANALDLGDLVAFYKKAKKRFDDDEEFREVSRQQVV 222

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  D +  +AWE++C+ SR++FQ+IY+ L++ LTERGESFY   + ++V  LE +GLL
Sbjct: 223  KLQAGDREAIRAWELLCEQSRQEFQQIYNLLDIQLTERGESFYNPLLSKVVEDLETQGLL 282

Query: 768  ELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              D G K ++ E     +    P+ + K++GG+ Y T+DLAA+R RIEE+  D I+YVTD
Sbjct: 283  VEDQGAKCVFLEGFTNKEGDPQPLIVQKTNGGYNYATTDLAALRYRIEEDGCDRIIYVTD 342

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQ  HF    + A++AG + P+   +  V FG+VLGE  KK KTR GDT++L +LLDE 
Sbjct: 343  SGQSTHFAQFFQVARRAGWI-PDNIEVVHVPFGLVLGEGGKKLKTREGDTIRLRDLLDEA 401

Query: 883  LRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            + R+  +L+   +    + TE  +    + V  G +KYADLS NR+  Y+FS+DKML  +
Sbjct: 402  VLRARAQLESIIQEEGRSETEEFIENVSRVVGIGAVKYADLSQNRSSSYIFSYDKMLSLQ 461

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+LYA+ RI  I+R   I+ ++L    Q   + L  E E ALAK +L +++VL  
Sbjct: 462  GNTAPYMLYAFVRIQGISRQGNIDFDNLSSDIQ---IQLGEETELALAKHILSLSEVLKE 518

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V ++L  + LCEYLY +S  F++FY+NC  ++ +   +     T RLLL +  AK +K  
Sbjct: 519  VEKELLPNRLCEYLYQLSKKFNQFYENCPVLQAEEPQR-----TSRLLLCDLAAKTLKLG 573

Query: 1061 FDILNIR 1067
              +L I+
Sbjct: 574  LSLLGIK 580



 Score =  293 bits (751), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 169/360 (46%), Positives = 230/360 (63%), Gaps = 33/360 (9%)

Query: 86  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           S  + L +    A+  AF E   G     V +TN K    FGD+Q N AM+L K  K K 
Sbjct: 3   STNELLRNQVEKALIAAFGEEMAGTDPVLVPTTNPK----FGDYQANLAMSLAKPLKQK- 57

Query: 144 EKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
               P DIAQ I  ++  SE    P         E+A PGF+N  L   Y  +Q+  I  
Sbjct: 58  ----PRDIAQKIIDNIDVSEFCEPP---------EIAGPGFINFTLKPSYLEQQLAAIEG 104

Query: 203 N---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
           +   G++P  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GHDV+RLNH
Sbjct: 105 DERLGIEP--VSHPQRVVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFWGHDVLRLNH 162

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 317
           VGDWGTQFGMLI +L++  PD LT +    + DL AFYK++KKRFD+DE F++ + Q VV
Sbjct: 163 VGDWGTQFGMLITYLREVSPDALTTANALDLGDLVAFYKKAKKRFDDDEEFREVSRQQVV 222

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 377
            LQ  D +  +AWE++C+ SR++FQ+IY+ L++ LTERGESFY   + ++V  LE +GLL
Sbjct: 223 KLQAGDREAIRAWELLCEQSRQEFQQIYNLLDIQLTERGESFYNPLLSKVVEDLETQGLL 282

Query: 378 ELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D G K ++ E     +    P+ + K++GG+ Y T+DLAA+R RIEE+  D I+YVTD
Sbjct: 283 VEDQGAKCVFLEGFTNKEGDPQPLIVQKTNGGYNYATTDLAALRYRIEEDGCDRIIYVTD 342



 Score =  293 bits (751), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 169/360 (46%), Positives = 230/360 (63%), Gaps = 33/360 (9%)

Query: 1103 SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            S  + L +    A+  AF E   G     V +TN K    FGD+Q N AM+L K  K K 
Sbjct: 3    STNELLRNQVEKALIAAFGEEMAGTDPVLVPTTNPK----FGDYQANLAMSLAKPLKQK- 57

Query: 1161 EKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
                P DIAQ I  ++  SE    P         E+A PGF+N  L   Y  +Q+  I  
Sbjct: 58   ----PRDIAQKIIDNIDVSEFCEPP---------EIAGPGFINFTLKPSYLEQQLAAIEG 104

Query: 1220 N---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            +   G++P  ++   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GHDV+RLNH
Sbjct: 105  DERLGIEP--VSHPQRVVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFWGHDVLRLNH 162

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            VGDWGTQFGMLI +L++  PD LT +    + DL AFYK++KKRFD+DE F++ + Q VV
Sbjct: 163  VGDWGTQFGMLITYLREVSPDALTTANALDLGDLVAFYKKAKKRFDDDEEFREVSRQQVV 222

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  D +  +AWE++C+ SR++FQ+IY+ L++ LTERGESFY   + ++V  LE +GLL
Sbjct: 223  KLQAGDREAIRAWELLCEQSRQEFQQIYNLLDIQLTERGESFYNPLLSKVVEDLETQGLL 282

Query: 1395 ELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D G K ++ E     +    P+ + K++GG+ Y T+DLAA+R RIEE+  D I+YVTD
Sbjct: 283  VEDQGAKCVFLEGFTNKEGDPQPLIVQKTNGGYNYATTDLAALRYRIEEDGCDRIIYVTD 342


>gi|428222915|ref|YP_007107085.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7502]
 gi|427996255|gb|AFY74950.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7502]
          Length = 582

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/582 (45%), Positives = 367/582 (63%), Gaps = 55/582 (9%)

Query: 499  KTASVASTNEKYVH-----------KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 547
            +TA V +  E+Y+            +FGD+QCN A++L K  K K +       AQ I  
Sbjct: 14   QTACVKAFGEEYLGIDPSVSVAKDLRFGDYQCNAALSLSKRLKQKPQAI----AAQIIQH 69

Query: 548  VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN-----GVQPPTLNK 602
            +  S+L   PS         +  PGF+NV L   +   ++   +VN     G++  T N+
Sbjct: 70   LTISDLGEAPS---------IDGPGFINVKLKPEFLASRLA--VVNSGDRLGIEE-TRNR 117

Query: 603  KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 662
            + R++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH+V+RLNHVGDWGTQFGMLI 
Sbjct: 118  Q-RIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGHEVLRLNHVGDWGTQFGMLIT 176

Query: 663  HLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
            +L++ +P  LT+S    + DL A Y+ +KKRFDEDE FK+ +   VV LQ   P+    W
Sbjct: 177  YLKEVYPRALTESDALDLGDLVALYRAAKKRFDEDEQFKEASRLAVVDLQSGQPEATFCW 236

Query: 721  EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--- 777
            +++CD SRR+FQKIYD L++ +TERGESFY  ++  +V  L+  GLLE  +G   ++   
Sbjct: 237  QLLCDQSRREFQKIYDALDIKITERGESFYSPYLASVVEDLQALGLLEKSEGALCVFLDG 296

Query: 778  --GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
               ++   +P+ I KSDGG+ Y T+DLAAIR RI+E+KA+ I+YVTD+GQ  HF  + + 
Sbjct: 297  FTNKEGDRLPLIIQKSDGGYNYATTDLAAIRYRIQEDKAERIIYVTDMGQSSHFEQVFQV 356

Query: 836  AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
            A++A  L  N T++  V FG+VLGED KK KTRSGDTV+L ELLDE + R    L+ +N 
Sbjct: 357  ARRANWLTDN-TKVIHVPFGLVLGEDGKKLKTRSGDTVRLQELLDEAIARVKTDLETRN- 414

Query: 896  HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIA 955
              E   T   E  +AV  G +KYADLS NR  +Y FSFDKML  +GNTA Y+LYAY RI 
Sbjct: 415  -PEFNDTYKQEVAEAVGLGAVKYADLSQNRTSNYAFSFDKMLSLQGNTAPYMLYAYVRIR 473

Query: 956  SIARTAGI--NSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEY 1013
             I+R   +  +SE+      S  ++L+HE E ALAK L+++ +++  V+ DL  + LC Y
Sbjct: 474  GISRKGALDFDSENF-----SAAIALKHELELALAKHLIQLPEIIDAVSEDLMPNRLCLY 528

Query: 1014 LYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAK 1055
            L+++S  F++FYD C  ++ +   ++      RLLL   TAK
Sbjct: 529  LFELSQKFNQFYDQCPVLQAEDSDRL-----SRLLLCHVTAK 565



 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/359 (45%), Positives = 226/359 (62%), Gaps = 43/359 (11%)

Query: 109 KTASVASTNEKYVH-----------KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 157
           +TA V +  E+Y+            +FGD+QCN A++L K  K K +       AQ I  
Sbjct: 14  QTACVKAFGEEYLGIDPSVSVAKDLRFGDYQCNAALSLSKRLKQKPQAI----AAQIIQH 69

Query: 158 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN-----GVQPPTLNK 212
           +  S+L   PS         +  PGF+NV L   +   ++   +VN     G++  T N+
Sbjct: 70  LTISDLGEAPS---------IDGPGFINVKLKPEFLASRLA--VVNSGDRLGIEE-TRNR 117

Query: 213 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 272
           + R++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH+V+RLNHVGDWGTQFGMLI 
Sbjct: 118 Q-RIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGHEVLRLNHVGDWGTQFGMLIT 176

Query: 273 HLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 330
           +L++ +P  LT+S    + DL A Y+ +KKRFDEDE FK+ +   VV LQ   P+    W
Sbjct: 177 YLKEVYPRALTESDALDLGDLVALYRAAKKRFDEDEQFKEASRLAVVDLQSGQPEATFCW 236

Query: 331 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--- 387
           +++CD SRR+FQKIYD L++ +TERGESFY  ++  +V  L+  GLLE  +G   ++   
Sbjct: 237 QLLCDQSRREFQKIYDALDIKITERGESFYSPYLASVVEDLQALGLLEKSEGALCVFLDG 296

Query: 388 --GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
              ++   +P+ I KSDGG+ Y T+DLAAIR RI+E+KA+ I+YVTD      + QV Q
Sbjct: 297 FTNKEGDRLPLIIQKSDGGYNYATTDLAAIRYRIQEDKAERIIYVTDMGQSSHFEQVFQ 355



 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/359 (45%), Positives = 226/359 (62%), Gaps = 43/359 (11%)

Query: 1126 KTASVASTNEKYVH-----------KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIAS 1174
            +TA V +  E+Y+            +FGD+QCN A++L K  K K +       AQ I  
Sbjct: 14   QTACVKAFGEEYLGIDPSVSVAKDLRFGDYQCNAALSLSKRLKQKPQAI----AAQIIQH 69

Query: 1175 VVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN-----GVQPPTLNK 1229
            +  S+L   PS         +  PGF+NV L   +   ++   +VN     G++  T N+
Sbjct: 70   LTISDLGEAPS---------IDGPGFINVKLKPEFLASRLA--VVNSGDRLGIEE-TRNR 117

Query: 1230 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 1289
            + R++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH+V+RLNHVGDWGTQFGMLI 
Sbjct: 118  Q-RIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGHEVLRLNHVGDWGTQFGMLIT 176

Query: 1290 HLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            +L++ +P  LT+S    + DL A Y+ +KKRFDEDE FK+ +   VV LQ   P+    W
Sbjct: 177  YLKEVYPRALTESDALDLGDLVALYRAAKKRFDEDEQFKEASRLAVVDLQSGQPEATFCW 236

Query: 1348 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--- 1404
            +++CD SRR+FQKIYD L++ +TERGESFY  ++  +V  L+  GLLE  +G   ++   
Sbjct: 237  QLLCDQSRREFQKIYDALDIKITERGESFYSPYLASVVEDLQALGLLEKSEGALCVFLDG 296

Query: 1405 --GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
               ++   +P+ I KSDGG+ Y T+DLAAIR RI+E+KA+ I+YVTD      + QV Q
Sbjct: 297  FTNKEGDRLPLIIQKSDGGYNYATTDLAAIRYRIQEDKAERIIYVTDMGQSSHFEQVFQ 355


>gi|307150379|ref|YP_003885763.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980607|gb|ADN12488.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 585

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 267/611 (43%), Positives = 378/611 (61%), Gaps = 52/611 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTAS--VASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            +S+ + L   FT A+++AF +   +     V +TN K    FGD+Q N A++L K  K  
Sbjct: 2    ISIIEQLKQRFTQALKIAFEQDFTEIEGLVVPATNPK----FGDYQSNVALSLAKPLK-- 55

Query: 533  GEKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---- 587
               ++P  IA Q + ++  S+L   P         ++A PGF+N  L R Y   QI    
Sbjct: 56   ---QSPRAIAEQLVKALEISDLCEPP---------QIAGPGFINFTLKRSYLENQISILQ 103

Query: 588  KD--IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 645
            KD  + V    PP      ++++DFSSPNIAKEMHVGHLRSTI+GD ++R+LE+ GH+V+
Sbjct: 104  KDPRLGVEKAAPPQ-----KIVIDFSSPNIAKEMHVGHLRSTILGDCLARILEFRGHEVL 158

Query: 646  RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAY 703
            RLNHVGDWGTQFGMLIA+L++ +PD LT +    + DL +FYK++K RFDEDE FK+ A 
Sbjct: 159  RLNHVGDWGTQFGMLIAYLREVYPDALTTANALDLGDLVSFYKKAKIRFDEDETFKEEAR 218

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 763
            Q VV LQ    D   AW+++C+ SRR+FQ IYD L++ L ERGESFY   +  ++  L++
Sbjct: 219  QEVVKLQAGANDSGHAWQLLCEQSRREFQGIYDILDIKLVERGESFYNPMLSGILTQLDE 278

Query: 764  KGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 818
            +GLL  D G K ++ E     +   +P+ + KSDGG+ Y T+DLAA++ R+E+++A  I+
Sbjct: 279  QGLLTEDQGAKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAALKYRVEQDQATRII 338

Query: 819  YVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSEL 878
            YVTD GQ  HF  + + AKKAGIL P    +  V FG+V GED KK KTRSG+T+KL +L
Sbjct: 339  YVTDAGQANHFAQVFQVAKKAGIL-PENVEVVHVAFGIVKGEDGKKLKTRSGETIKLKDL 397

Query: 879  LDEGL---RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDK 935
            +DE +   RR L+     +  TE +   ++   Q V    IKYADLS NR  DY+FS+DK
Sbjct: 398  IDEAIAHARRDLETRLSSDERTE-SQEFINHVAQGVGISAIKYADLSQNRVSDYIFSYDK 456

Query: 936  MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMN 995
            ML  +GNTA Y+LYAY R+ SI+R   I+   L   A    V L  E E  L+K LL++ 
Sbjct: 457  MLALQGNTAPYMLYAYARVQSISREGNIDFNQLDEGAS---VLLTEEAELVLSKCLLQLT 513

Query: 996  DVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAK 1055
            +V+  V RDL  + LCEYLY++S  F++FY+ C  ++ +       + T RL+L + TAK
Sbjct: 514  EVIQDVERDLLPNRLCEYLYELSKKFNKFYETCPVLKSE-----DPIKTSRLILCDLTAK 568

Query: 1056 VMKKCFDILNI 1066
             +K    +L I
Sbjct: 569  TLKLGLFLLGI 579



 Score =  289 bits (739), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 173/428 (40%), Positives = 255/428 (59%), Gaps = 48/428 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTAS--VASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           +S+ + L   FT A+++AF +   +     V +TN K    FGD+Q N A++L K  K  
Sbjct: 2   ISIIEQLKQRFTQALKIAFEQDFTEIEGLVVPATNPK----FGDYQSNVALSLAKPLK-- 55

Query: 143 GEKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---- 197
              ++P  IA Q + ++  S+L   P         ++A PGF+N  L R Y   QI    
Sbjct: 56  ---QSPRAIAEQLVKALEISDLCEPP---------QIAGPGFINFTLKRSYLENQISILQ 103

Query: 198 KD--IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 255
           KD  + V    PP      ++++DFSSPNIAKEMHVGHLRSTI+GD ++R+LE+ GH+V+
Sbjct: 104 KDPRLGVEKAAPPQ-----KIVIDFSSPNIAKEMHVGHLRSTILGDCLARILEFRGHEVL 158

Query: 256 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAY 313
           RLNHVGDWGTQFGMLIA+L++ +PD LT +    + DL +FYK++K RFDEDE FK+ A 
Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPDALTTANALDLGDLVSFYKKAKIRFDEDETFKEEAR 218

Query: 314 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 373
           Q VV LQ    D   AW+++C+ SRR+FQ IYD L++ L ERGESFY   +  ++  L++
Sbjct: 219 QEVVKLQAGANDSGHAWQLLCEQSRREFQGIYDILDIKLVERGESFYNPMLSGILTQLDE 278

Query: 374 KGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 428
           +GLL  D G K ++ E     +   +P+ + KSDGG+ Y T+DLAA++ R+E+++A  I+
Sbjct: 279 QGLLTEDQGAKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAALKYRVEQDQATRII 338

Query: 429 YVTDHRSYHQVLQAIAEEEKKQGISSSSSSQ-------TKGT-AKKMNVPVRDRMSVRDY 480
           YVTD    +   Q + +  KK GI   +           KG   KK+     + + ++D 
Sbjct: 339 YVTDAGQANHFAQ-VFQVAKKAGILPENVEVVHVAFGIVKGEDGKKLKTRSGETIKLKDL 397

Query: 481 LSDVFTHA 488
           + +   HA
Sbjct: 398 IDEAIAHA 405



 Score =  287 bits (735), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 164/376 (43%), Positives = 236/376 (62%), Gaps = 42/376 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTAS--VASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            +S+ + L   FT A+++AF +   +     V +TN K    FGD+Q N A++L K  K  
Sbjct: 2    ISIIEQLKQRFTQALKIAFEQDFTEIEGLVVPATNPK----FGDYQSNVALSLAKPLK-- 55

Query: 1160 GEKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---- 1214
               ++P  IA Q + ++  S+L   P         ++A PGF+N  L R Y   QI    
Sbjct: 56   ---QSPRAIAEQLVKALEISDLCEPP---------QIAGPGFINFTLKRSYLENQISILQ 103

Query: 1215 KD--IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 1272
            KD  + V    PP      ++++DFSSPNIAKEMHVGHLRSTI+GD ++R+LE+ GH+V+
Sbjct: 104  KDPRLGVEKAAPPQ-----KIVIDFSSPNIAKEMHVGHLRSTILGDCLARILEFRGHEVL 158

Query: 1273 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAY 1330
            RLNHVGDWGTQFGMLIA+L++ +PD LT +    + DL +FYK++K RFDEDE FK+ A 
Sbjct: 159  RLNHVGDWGTQFGMLIAYLREVYPDALTTANALDLGDLVSFYKKAKIRFDEDETFKEEAR 218

Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 1390
            Q VV LQ    D   AW+++C+ SRR+FQ IYD L++ L ERGESFY   +  ++  L++
Sbjct: 219  QEVVKLQAGANDSGHAWQLLCEQSRREFQGIYDILDIKLVERGESFYNPMLSGILTQLDE 278

Query: 1391 KGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 1445
            +GLL  D G K ++ E     +   +P+ + KSDGG+ Y T+DLAA++ R+E+++A  I+
Sbjct: 279  QGLLTEDQGAKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAALKYRVEQDQATRII 338

Query: 1446 YVTD---HRSYHQVLQ 1458
            YVTD      + QV Q
Sbjct: 339  YVTDAGQANHFAQVFQ 354


>gi|443320043|ref|ZP_21049173.1| arginyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
 gi|442790240|gb|ELR99843.1| arginyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
          Length = 583

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/605 (42%), Positives = 380/605 (62%), Gaps = 51/605 (8%)

Query: 481  LSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 538
            L+D FT A+  AF    +  +   VA++N +    FGD+QCN +++L K+    GE  NP
Sbjct: 5    LNDRFTQALIKAFGAEIIPSEPLVVAASNPR----FGDYQCNVSLSLTKVL---GE--NP 55

Query: 539  FDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------ 591
              IA Q I  +  +++   P         E+A PGF+N+ L   Y  +++ +I       
Sbjct: 56   RAIALQIIEQLQITDICLPP---------EIAGPGFINLTLQPDYISDKLLNIYQDQEHL 106

Query: 592  -VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
             +   QP     + R++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHV
Sbjct: 107  GIELAQP-----RERIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHQVLRLNHV 161

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            GDWGTQFGMLIA+L++ +P+ L K     + DL  FYK++K RFD+DE F + A Q VV 
Sbjct: 162  GDWGTQFGMLIAYLREAYPEALVKKDALLLGDLVTFYKQAKLRFDQDEAFGEIARQEVVK 221

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQ  + + ++AWE++C+ SRR+FQ IYD L++T+ ERGESFY  ++ ++V  L+ KGLL 
Sbjct: 222  LQSGNEESRRAWELLCEQSRREFQVIYDLLDITIVERGESFYNPYLAEIVAALDAKGLLT 281

Query: 769  LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             DDG K ++      +    +P+ + KSDGG+ Y T+DLAAI+ R E++ A  I+YVTD+
Sbjct: 282  TDDGAKCVFLTGFTNKQGDPLPLIVQKSDGGYNYATTDLAAIKYRTEKDGAQKIIYVTDI 341

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ  HF  + + A++AG L P + ++  V FG+VLGED KK KTRSGDT++L +LLDE +
Sbjct: 342  GQSNHFAQVFQIAQRAGFL-PPEVKVIHVPFGLVLGEDGKKVKTRSGDTIRLRDLLDEAI 400

Query: 884  RRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
             R+   L  +    E T TE  ++E  Q +    +KYADLS NR  +YVFS+DKML  +G
Sbjct: 401  ARARQDLITRLSQEERTETEAFITEVAQVIGISAVKYADLSQNRTSNYVFSYDKMLALQG 460

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
            NTA YLLYAY R+  I R   I+ +++    Q   + L+   E +LAK +L+ ND++  V
Sbjct: 461  NTAPYLLYAYVRVQGIIRKGNIDFQEIENNLQ---ILLDSTAEQSLAKHILQFNDLIQEV 517

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
              +L  + L +YL+++S  F++FYD C  ++       +++   RL+LAE TA+ +K   
Sbjct: 518  EIELLPNRLSQYLFELSQKFNQFYDQCPILQAT-----ESLRISRLILAELTARTLKLGL 572

Query: 1062 DILNI 1066
             +L I
Sbjct: 573  SLLGI 577



 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 164/371 (44%), Positives = 234/371 (63%), Gaps = 43/371 (11%)

Query: 91  LSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 148
           L+D FT A+  AF    +  +   VA++N +    FGD+QCN +++L K+    GE  NP
Sbjct: 5   LNDRFTQALIKAFGAEIIPSEPLVVAASNPR----FGDYQCNVSLSLTKVL---GE--NP 55

Query: 149 FDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------ 201
             IA Q I  +  +++   P         E+A PGF+N+ L   Y  +++ +I       
Sbjct: 56  RAIALQIIEQLQITDICLPP---------EIAGPGFINLTLQPDYISDKLLNIYQDQEHL 106

Query: 202 -VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
            +   QP     + R++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHV
Sbjct: 107 GIELAQP-----RERIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHQVLRLNHV 161

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           GDWGTQFGMLIA+L++ +P+ L K     + DL  FYK++K RFD+DE F + A Q VV 
Sbjct: 162 GDWGTQFGMLIAYLREAYPEALVKKDALLLGDLVTFYKQAKLRFDQDEAFGEIARQEVVK 221

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ  + + ++AWE++C+ SRR+FQ IYD L++T+ ERGESFY  ++ ++V  L+ KGLL 
Sbjct: 222 LQSGNEESRRAWELLCEQSRREFQVIYDLLDITIVERGESFYNPYLAEIVAALDAKGLLT 281

Query: 379 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD- 432
            DDG K ++      +    +P+ + KSDGG+ Y T+DLAAI+ R E++ A  I+YVTD 
Sbjct: 282 TDDGAKCVFLTGFTNKQGDPLPLIVQKSDGGYNYATTDLAAIKYRTEKDGAQKIIYVTDI 341

Query: 433 --HRSYHQVLQ 441
                + QV Q
Sbjct: 342 GQSNHFAQVFQ 352



 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 164/371 (44%), Positives = 234/371 (63%), Gaps = 43/371 (11%)

Query: 1108 LSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 1165
            L+D FT A+  AF    +  +   VA++N +    FGD+QCN +++L K+    GE  NP
Sbjct: 5    LNDRFTQALIKAFGAEIIPSEPLVVAASNPR----FGDYQCNVSLSLTKVL---GE--NP 55

Query: 1166 FDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------ 1218
              IA Q I  +  +++   P         E+A PGF+N+ L   Y  +++ +I       
Sbjct: 56   RAIALQIIEQLQITDICLPP---------EIAGPGFINLTLQPDYISDKLLNIYQDQEHL 106

Query: 1219 -VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
             +   QP     + R++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHV
Sbjct: 107  GIELAQP-----RERIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHQVLRLNHV 161

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            GDWGTQFGMLIA+L++ +P+ L K     + DL  FYK++K RFD+DE F + A Q VV 
Sbjct: 162  GDWGTQFGMLIAYLREAYPEALVKKDALLLGDLVTFYKQAKLRFDQDEAFGEIARQEVVK 221

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQ  + + ++AWE++C+ SRR+FQ IYD L++T+ ERGESFY  ++ ++V  L+ KGLL 
Sbjct: 222  LQSGNEESRRAWELLCEQSRREFQVIYDLLDITIVERGESFYNPYLAEIVAALDAKGLLT 281

Query: 1396 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD- 1449
             DDG K ++      +    +P+ + KSDGG+ Y T+DLAAI+ R E++ A  I+YVTD 
Sbjct: 282  TDDGAKCVFLTGFTNKQGDPLPLIVQKSDGGYNYATTDLAAIKYRTEKDGAQKIIYVTDI 341

Query: 1450 --HRSYHQVLQ 1458
                 + QV Q
Sbjct: 342  GQSNHFAQVFQ 352


>gi|297621921|ref|YP_003710058.1| Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377222|gb|ADI39052.1| Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|337294180|emb|CCB92164.1| Arginyl-tRNA synthetase [Waddlia chondrophila 2032/99]
          Length = 576

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/596 (42%), Positives = 372/596 (62%), Gaps = 36/596 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L  +F  A   AFP+L +K+  +     K   KFG +QCN AM L K          P +
Sbjct: 5    LIQIFYSAFISAFPQLKEKSVEIDIAQSKQ-EKFGHYQCNTAMRLTKQLH-----MPPRE 58

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
            IAQ I   V             I+K+E+A PGF+N+FLS  Y  ++++ +  +      L
Sbjct: 59   IAQRIVESVDK--------GDAIEKLEIAGPGFINIFLSPAYIEKKVQTMAASPRLDIAL 110

Query: 601  NKKL-RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
             +K  +V+V+FSSPN AKE+HVGHLRSTIIGD ++R+ E+LGHDV+RLNHVGDWGT FGM
Sbjct: 111  PEKTEKVIVEFSSPNTAKELHVGHLRSTIIGDCLARVFEFLGHDVLRLNHVGDWGTAFGM 170

Query: 660  LIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            LIA+L+   P+ LT  +   +  L ++YK SKK+FDED  FKK +   VV+LQ  + D  
Sbjct: 171  LIAYLKLSHPEILTGEEETDLPHLVSWYKASKKQFDEDPGFKKISQLEVVSLQGGESDSL 230

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 777
            KAWE+IC++SRR +Q+IY+ L+V + ERGES+Y   + +L+  L++K L+E+ +G K ++
Sbjct: 231  KAWEIICEISRRSYQEIYNLLDVAIEERGESYYNPVLPELIEELDQKELIEISEGAKCIF 290

Query: 778  -----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
                   +   +P+ + KSDGGF YDT+D+AA++QR++EEKAD I+ VTD GQ +HF+L+
Sbjct: 291  IPEFCNREGSPMPLMVQKSDGGFGYDTTDMAAMKQRVQEEKADRIIIVTDAGQALHFKLV 350

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
               + KAG L+P+K R D V FG+VLG D KKF+TRSG+  +L +L+   + ++ + + +
Sbjct: 351  YAASVKAGYLDPDKVRFDHVTFGLVLGADGKKFRTRSGEVERLIDLIYTAIDKAREIMAE 410

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
            +N   ++   +  +  +A+  G IKYADLS +R  DY FS+D+ML   GNTA +L+YAY 
Sbjct: 411  RN--PDMPQEQREKIARALGIGAIKYADLSCHRTGDYTFSYDRMLRFEGNTAAFLMYAYV 468

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RIA I R  G + + L+ A     +SL+H  E AL   L + N+ L  V  DL  + L +
Sbjct: 469  RIAGIKRKIGADIDALQAA-----ISLKHPSEMALGLHLAQFNEALQQVAEDLLPNRLSD 523

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YLY ++  F+ FY +C       EG  +     RLLL EATA+++K+   +L + T
Sbjct: 524  YLYTLAEKFNAFYRDC-----QVEGAPE--QNSRLLLCEATARILKQGLHLLGVET 572



 Score =  293 bits (751), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 157/350 (44%), Positives = 226/350 (64%), Gaps = 22/350 (6%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L  +F  A   AFP+L +K+  +     K   KFG +QCN AM L K          P +
Sbjct: 5   LIQIFYSAFISAFPQLKEKSVEIDIAQSKQ-EKFGHYQCNTAMRLTKQLH-----MPPRE 58

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 210
           IAQ I   V             I+K+E+A PGF+N+FLS  Y  ++++ +  +      L
Sbjct: 59  IAQRIVESVDK--------GDAIEKLEIAGPGFINIFLSPAYIEKKVQTMAASPRLDIAL 110

Query: 211 NKKL-RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
            +K  +V+V+FSSPN AKE+HVGHLRSTIIGD ++R+ E+LGHDV+RLNHVGDWGT FGM
Sbjct: 111 PEKTEKVIVEFSSPNTAKELHVGHLRSTIIGDCLARVFEFLGHDVLRLNHVGDWGTAFGM 170

Query: 270 LIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           LIA+L+   P+ LT  +   +  L ++YK SKK+FDED  FKK +   VV+LQ  + D  
Sbjct: 171 LIAYLKLSHPEILTGEEETDLPHLVSWYKASKKQFDEDPGFKKISQLEVVSLQGGESDSL 230

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 387
           KAWE+IC++SRR +Q+IY+ L+V + ERGES+Y   + +L+  L++K L+E+ +G K ++
Sbjct: 231 KAWEIICEISRRSYQEIYNLLDVAIEERGESYYNPVLPELIEELDQKELIEISEGAKCIF 290

Query: 388 -----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
                  +   +P+ + KSDGGF YDT+D+AA++QR++EEKAD I+ VTD
Sbjct: 291 IPEFCNREGSPMPLMVQKSDGGFGYDTTDMAAMKQRVQEEKADRIIIVTD 340



 Score =  293 bits (751), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 157/350 (44%), Positives = 226/350 (64%), Gaps = 22/350 (6%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L  +F  A   AFP+L +K+  +     K   KFG +QCN AM L K          P +
Sbjct: 5    LIQIFYSAFISAFPQLKEKSVEIDIAQSKQ-EKFGHYQCNTAMRLTKQLH-----MPPRE 58

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
            IAQ I   V             I+K+E+A PGF+N+FLS  Y  ++++ +  +      L
Sbjct: 59   IAQRIVESVDK--------GDAIEKLEIAGPGFINIFLSPAYIEKKVQTMAASPRLDIAL 110

Query: 1228 NKKL-RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
             +K  +V+V+FSSPN AKE+HVGHLRSTIIGD ++R+ E+LGHDV+RLNHVGDWGT FGM
Sbjct: 111  PEKTEKVIVEFSSPNTAKELHVGHLRSTIIGDCLARVFEFLGHDVLRLNHVGDWGTAFGM 170

Query: 1287 LIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            LIA+L+   P+ LT  +   +  L ++YK SKK+FDED  FKK +   VV+LQ  + D  
Sbjct: 171  LIAYLKLSHPEILTGEEETDLPHLVSWYKASKKQFDEDPGFKKISQLEVVSLQGGESDSL 230

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 1404
            KAWE+IC++SRR +Q+IY+ L+V + ERGES+Y   + +L+  L++K L+E+ +G K ++
Sbjct: 231  KAWEIICEISRRSYQEIYNLLDVAIEERGESYYNPVLPELIEELDQKELIEISEGAKCIF 290

Query: 1405 -----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
                   +   +P+ + KSDGGF YDT+D+AA++QR++EEKAD I+ VTD
Sbjct: 291  IPEFCNREGSPMPLMVQKSDGGFGYDTTDMAAMKQRVQEEKADRIIIVTD 340


>gi|254415644|ref|ZP_05029403.1| arginyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
 gi|196177594|gb|EDX72599.1| arginyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
          Length = 585

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/567 (45%), Positives = 363/567 (64%), Gaps = 38/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 571
            KFGD+Q N A++L K        + P  IAQ + + +  +++   P+         VA P
Sbjct: 38   KFGDYQSNAALSLAKPLG-----QPPRAIAQMLINHLDVADICYTPT---------VAGP 83

Query: 572  GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            GF+N  L   Y   ++   + +   GV+P    +  RV+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINFTLKPAYLEAKLNRNLTHPHLGVEPA--KQPQRVVVDFSSPNIAKEMHVGHLRSTI 141

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYK 686
            IGD I+R+LE+  HDV+RLNHVGDWGTQFGMLI +L++  P+ LT +  +   DL +FY+
Sbjct: 142  IGDCIARILEFRDHDVLRLNHVGDWGTQFGMLITYLREVCPEALTTAEAVDLGDLVSFYR 201

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 746
            ++KKRFD DE+F++ A Q VV LQ    D K+AW+++C+ SRR+FQ IYD L+V +TERG
Sbjct: 202  QAKKRFDTDEVFQEAARQEVVKLQAGAEDTKRAWQLLCEQSRREFQVIYDLLDVHITERG 261

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGS-IPMTIVKSDGGFTYDTSD 801
            ESFY   +  +V  LE+ GLL  D G K ++ E     +G  +P+ + KSDGG+ Y T+D
Sbjct: 262  ESFYNPLLPDVVKDLEQSGLLVEDQGAKCVFLEGFTNKKGEPLPLIVQKSDGGYNYATTD 321

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAA+R RI++  A  I+YVTD GQ  HF  + + A++AG L P    +  V FG+VLGED
Sbjct: 322  LAALRYRIDQNGAKRIIYVTDAGQANHFAQVFQVAQRAGWL-PEIVEIVHVPFGLVLGED 380

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYA 919
             KK KTRSG+TV+L +LLD+ + R+   L+ + +      TE  +    Q V    +KYA
Sbjct: 381  GKKLKTRSGETVRLRDLLDQAIARARADLETRIQAEGRQETEEFIEHVAQVVGMAAVKYA 440

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  +YVFSFDKML  +GNTA YLLYAY RI SI R  GI+ E LR    ST VSL
Sbjct: 441  DLSQNRTSNYVFSFDKMLSLKGNTAPYLLYAYARIQSIGRKGGIDFEQLRT---STQVSL 497

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
            + ++E  LAK LL++N+V+  V ++L  + LC+YLY++S  FS+FYD C  ++ +     
Sbjct: 498  KEDQEATLAKHLLQVNEVIKEVEQELLPNRLCQYLYELSEKFSQFYDQCPVLKAE----- 552

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
            ++V   RL+L + TA+ +K    +L I
Sbjct: 553  ESVRLSRLILCDLTAQTLKLGLSLLGI 579



 Score =  276 bits (705), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 151/321 (47%), Positives = 210/321 (65%), Gaps = 27/321 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 181
           KFGD+Q N A++L K        + P  IAQ + + +  +++   P+         VA P
Sbjct: 38  KFGDYQSNAALSLAKPLG-----QPPRAIAQMLINHLDVADICYTPT---------VAGP 83

Query: 182 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           GF+N  L   Y   ++   + +   GV+P    +  RV+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84  GFINFTLKPAYLEAKLNRNLTHPHLGVEPA--KQPQRVVVDFSSPNIAKEMHVGHLRSTI 141

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYK 296
           IGD I+R+LE+  HDV+RLNHVGDWGTQFGMLI +L++  P+ LT +  +   DL +FY+
Sbjct: 142 IGDCIARILEFRDHDVLRLNHVGDWGTQFGMLITYLREVCPEALTTAEAVDLGDLVSFYR 201

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 356
           ++KKRFD DE+F++ A Q VV LQ    D K+AW+++C+ SRR+FQ IYD L+V +TERG
Sbjct: 202 QAKKRFDTDEVFQEAARQEVVKLQAGAEDTKRAWQLLCEQSRREFQVIYDLLDVHITERG 261

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGS-IPMTIVKSDGGFTYDTSD 411
           ESFY   +  +V  LE+ GLL  D G K ++ E     +G  +P+ + KSDGG+ Y T+D
Sbjct: 262 ESFYNPLLPDVVKDLEQSGLLVEDQGAKCVFLEGFTNKKGEPLPLIVQKSDGGYNYATTD 321

Query: 412 LAAIRQRIEEEKADWIVYVTD 432
           LAA+R RI++  A  I+YVTD
Sbjct: 322 LAALRYRIDQNGAKRIIYVTD 342



 Score =  276 bits (705), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 151/321 (47%), Positives = 210/321 (65%), Gaps = 27/321 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 1198
            KFGD+Q N A++L K        + P  IAQ + + +  +++   P+         VA P
Sbjct: 38   KFGDYQSNAALSLAKPLG-----QPPRAIAQMLINHLDVADICYTPT---------VAGP 83

Query: 1199 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            GF+N  L   Y   ++   + +   GV+P    +  RV+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINFTLKPAYLEAKLNRNLTHPHLGVEPA--KQPQRVVVDFSSPNIAKEMHVGHLRSTI 141

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYK 1313
            IGD I+R+LE+  HDV+RLNHVGDWGTQFGMLI +L++  P+ LT +  +   DL +FY+
Sbjct: 142  IGDCIARILEFRDHDVLRLNHVGDWGTQFGMLITYLREVCPEALTTAEAVDLGDLVSFYR 201

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
            ++KKRFD DE+F++ A Q VV LQ    D K+AW+++C+ SRR+FQ IYD L+V +TERG
Sbjct: 202  QAKKRFDTDEVFQEAARQEVVKLQAGAEDTKRAWQLLCEQSRREFQVIYDLLDVHITERG 261

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGS-IPMTIVKSDGGFTYDTSD 1428
            ESFY   +  +V  LE+ GLL  D G K ++ E     +G  +P+ + KSDGG+ Y T+D
Sbjct: 262  ESFYNPLLPDVVKDLEQSGLLVEDQGAKCVFLEGFTNKKGEPLPLIVQKSDGGYNYATTD 321

Query: 1429 LAAIRQRIEEEKADWIVYVTD 1449
            LAA+R RI++  A  I+YVTD
Sbjct: 322  LAALRYRIDQNGAKRIIYVTD 342


>gi|428318220|ref|YP_007116102.1| arginyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
 gi|428241900|gb|AFZ07686.1| arginyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
          Length = 585

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/607 (42%), Positives = 372/607 (61%), Gaps = 42/607 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            S+   L   F  A   AF E   G      A++N      FGDFQCN AM+L K      
Sbjct: 3    SIAQQLKAKFEKAFTAAFGESYAGADPMLAAASNPN----FGDFQCNAAMSLGKKLG--- 55

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
              K P  IA +I          N  +A + +  E+A PGF+N+ L   Y   QI  I  +
Sbjct: 56   --KPPRAIASTIIE--------NLDIADICETPEIAGPGFINLKLKPAYLEAQISAIAAD 105

Query: 594  ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
               G++P    +   + +DFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+R+NH+
Sbjct: 106  SRLGIEPAKTPQT--IAIDFSSPNIAKEMHVGHLRSTIIGDAIARILEFQGHDVLRINHI 163

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            GDWGTQFGMLIA+L++  P+ LT +    + DL AFY+++K+RFD DE FK+ A Q VV 
Sbjct: 164  GDWGTQFGMLIAYLREVHPEALTTADALDLGDLVAFYRQAKQRFDTDETFKETARQEVVK 223

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQ    D ++AW+++CD SRR+FQ IYD L++ LTERGESFY   +  +V  L   GLL 
Sbjct: 224  LQAGAEDTRRAWKLLCDQSRREFQVIYDLLDIKLTERGESFYNPLLPAVVEDLTNLGLLV 283

Query: 769  LDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              DG K ++ E     +   +P+ + K+DGG+ Y T+DLAA+R RI+E+ A  ++YVTD 
Sbjct: 284  ESDGAKCVFVEGFTNKEGEPLPLIVQKTDGGYNYATTDLAAVRYRIKEDGAKRLIYVTDS 343

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ  HF  +   AKKAG + P    +  V FG+VLGED KK KTRSG+TV+L +LLDE +
Sbjct: 344  GQANHFAQVFAVAKKAGWI-PEDVEIVHVPFGLVLGEDGKKLKTRSGETVRLQDLLDEAI 402

Query: 884  RRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
             R+   L+++ +  E   TE  ++   + V    +KYADLS NR  +Y+FS+DKML  +G
Sbjct: 403  VRTRQDLEERLKAEERQETEEFIANVSRTVGLSAVKYADLSQNRASNYIFSYDKMLALQG 462

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
            NTA Y+LYAY R+  I R   IN ++L   A+   V L+ + E  LAK LL++N+V+  V
Sbjct: 463  NTAPYMLYAYVRVQGIRRKGEINFDNLDAGAK---VILQSDAELVLAKHLLQLNEVVNAV 519

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
              DL  + +C+YL+++S  F++F++ C  ++ +     + + T RL+L + TA+ +K   
Sbjct: 520  GGDLLPNRICQYLFELSQKFNQFFEQCPVLQSE-----EPLRTSRLVLCDLTARTLKLGL 574

Query: 1062 DILNIRT 1068
            ++L I+ 
Sbjct: 575  ELLGIKV 581



 Score =  291 bits (744), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 165/375 (44%), Positives = 225/375 (60%), Gaps = 31/375 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           S+   L   F  A   AF E   G      A++N      FGDFQCN AM+L K      
Sbjct: 3   SIAQQLKAKFEKAFTAAFGESYAGADPMLAAASNPN----FGDFQCNAAMSLGKKLG--- 55

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
             K P  IA +I          N  +A + +  E+A PGF+N+ L   Y   QI  I  +
Sbjct: 56  --KPPRAIASTIIE--------NLDIADICETPEIAGPGFINLKLKPAYLEAQISAIAAD 105

Query: 204 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
              G++P    +   + +DFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+R+NH+
Sbjct: 106 SRLGIEPAKTPQT--IAIDFSSPNIAKEMHVGHLRSTIIGDAIARILEFQGHDVLRINHI 163

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           GDWGTQFGMLIA+L++  P+ LT +    + DL AFY+++K+RFD DE FK+ A Q VV 
Sbjct: 164 GDWGTQFGMLIAYLREVHPEALTTADALDLGDLVAFYRQAKQRFDTDETFKETARQEVVK 223

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ    D ++AW+++CD SRR+FQ IYD L++ LTERGESFY   +  +V  L   GLL 
Sbjct: 224 LQAGAEDTRRAWKLLCDQSRREFQVIYDLLDIKLTERGESFYNPLLPAVVEDLTNLGLLV 283

Query: 379 LDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             DG K ++ E     +   +P+ + K+DGG+ Y T+DLAA+R RI+E+ A  ++YVTD 
Sbjct: 284 ESDGAKCVFVEGFTNKEGEPLPLIVQKTDGGYNYATTDLAAVRYRIKEDGAKRLIYVTDS 343

Query: 434 RSYHQVLQAIAEEEK 448
              +   Q  A  +K
Sbjct: 344 GQANHFAQVFAVAKK 358



 Score =  289 bits (739), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 162/359 (45%), Positives = 220/359 (61%), Gaps = 31/359 (8%)

Query: 1103 SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            S+   L   F  A   AF E   G      A++N      FGDFQCN AM+L K      
Sbjct: 3    SIAQQLKAKFEKAFTAAFGESYAGADPMLAAASNPN----FGDFQCNAAMSLGKKLG--- 55

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
              K P  IA +I          N  +A + +  E+A PGF+N+ L   Y   QI  I  +
Sbjct: 56   --KPPRAIASTIIE--------NLDIADICETPEIAGPGFINLKLKPAYLEAQISAIAAD 105

Query: 1221 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
               G++P    +   + +DFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+R+NH+
Sbjct: 106  SRLGIEPAKTPQT--IAIDFSSPNIAKEMHVGHLRSTIIGDAIARILEFQGHDVLRINHI 163

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            GDWGTQFGMLIA+L++  P+ LT +    + DL AFY+++K+RFD DE FK+ A Q VV 
Sbjct: 164  GDWGTQFGMLIAYLREVHPEALTTADALDLGDLVAFYRQAKQRFDTDETFKETARQEVVK 223

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQ    D ++AW+++CD SRR+FQ IYD L++ LTERGESFY   +  +V  L   GLL 
Sbjct: 224  LQAGAEDTRRAWKLLCDQSRREFQVIYDLLDIKLTERGESFYNPLLPAVVEDLTNLGLLV 283

Query: 1396 LDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              DG K ++ E     +   +P+ + K+DGG+ Y T+DLAA+R RI+E+ A  ++YVTD
Sbjct: 284  ESDGAKCVFVEGFTNKEGEPLPLIVQKTDGGYNYATTDLAAVRYRIKEDGAKRLIYVTD 342


>gi|428778840|ref|YP_007170626.1| arginyl-tRNA synthetase [Dactylococcopsis salina PCC 8305]
 gi|428693119|gb|AFZ49269.1| arginyl-tRNA synthetase [Dactylococcopsis salina PCC 8305]
          Length = 584

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/566 (45%), Positives = 357/566 (63%), Gaps = 37/566 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N A++L K  K K     P D AQ I          +  +A++ +  E+A PG
Sbjct: 38   EFGDYQSNVALSLAKTLKQK-----PRDTAQQILD--------HLEIAQLCEPPEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   Y   Q++ I  +   GV+     +  RV+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKPSYLENQLQTIAQDDQLGVEKAETPQ--RVIVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA--DLQAFYKE 687
            GD I+R+LE+ GH+V+RLNHVGDWGTQFGMLIA+L++ +PD L K+  +A  DL   Y++
Sbjct: 143  GDCIARILEFRGHNVLRLNHVGDWGTQFGMLIAYLREAYPDALIKADALAIGDLVTLYRQ 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +KKRFDEDE F+  A + VV LQ+   D  KAW+++C+ SRR+FQ IYD L V LTERGE
Sbjct: 203  AKKRFDEDEQFQTTAREEVVKLQKGAEDSVKAWQLLCEQSRREFQVIYDLLGVKLTERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 802
            SFY   +  +V  LE KGLLE D G K ++ E   +     +P+ + K+DGG+ Y T+DL
Sbjct: 263  SFYNPLLPDVVGELEAKGLLEEDQGAKCVFLEGFSNKSGERLPLIVQKTDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AAIR RI E+ A  I+YVTD GQ  HF  + + AK+AG + P    +  V FG+V GED 
Sbjct: 323  AAIRYRIREDGAQRIIYVTDAGQANHFTQVFQVAKRAGWI-PEDVELVHVPFGLVQGEDG 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYAD 920
            KK KTRSGDT++L +LLDE + RS   L+ +        +E  + +  + V    +KYAD
Sbjct: 382  KKLKTRSGDTIRLRDLLDEAIARSRQDLEKRFAAEGRNESEDFIEKTARGVGISAVKYAD 441

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  +YVFSFDKML  +GNTA YLLYAY R+  I+R   I   DL      T V L 
Sbjct: 442  LSRNRTSNYVFSFDKMLALQGNTAPYLLYAYVRVQGISRKGNI---DLATLGNQTIV-LA 497

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             + E  LAK +L+++D+L  V +DL  + LC YL+++S  F++FYD C  ++ +   +  
Sbjct: 498  DDSELVLAKHILQLSDILKEVEKDLLPNRLCLYLFELSQKFNQFYDRCPVLQAEEPKR-- 555

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNI 1066
               T RL+LA+ TA+ +K   ++L I
Sbjct: 556  ---TSRLMLADLTARTLKLGLNLLGI 578



 Score =  293 bits (750), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 159/320 (49%), Positives = 212/320 (66%), Gaps = 25/320 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N A++L K  K K     P D AQ I          +  +A++ +  E+A PG
Sbjct: 38  EFGDYQSNVALSLAKTLKQK-----PRDTAQQILD--------HLEIAQLCEPPEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   Y   Q++ I  +   GV+     +  RV+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINLKLKPSYLENQLQTIAQDDQLGVEKAETPQ--RVIVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA--DLQAFYKE 297
           GD I+R+LE+ GH+V+RLNHVGDWGTQFGMLIA+L++ +PD L K+  +A  DL   Y++
Sbjct: 143 GDCIARILEFRGHNVLRLNHVGDWGTQFGMLIAYLREAYPDALIKADALAIGDLVTLYRQ 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +KKRFDEDE F+  A + VV LQ+   D  KAW+++C+ SRR+FQ IYD L V LTERGE
Sbjct: 203 AKKRFDEDEQFQTTAREEVVKLQKGAEDSVKAWQLLCEQSRREFQVIYDLLGVKLTERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 412
           SFY   +  +V  LE KGLLE D G K ++ E   +     +P+ + K+DGG+ Y T+DL
Sbjct: 263 SFYNPLLPDVVGELEAKGLLEEDQGAKCVFLEGFSNKSGERLPLIVQKTDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTD 432
           AAIR RI E+ A  I+YVTD
Sbjct: 323 AAIRYRIREDGAQRIIYVTD 342



 Score =  293 bits (750), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 159/320 (49%), Positives = 212/320 (66%), Gaps = 25/320 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N A++L K  K K     P D AQ I          +  +A++ +  E+A PG
Sbjct: 38   EFGDYQSNVALSLAKTLKQK-----PRDTAQQILD--------HLEIAQLCEPPEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   Y   Q++ I  +   GV+     +  RV+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKPSYLENQLQTIAQDDQLGVEKAETPQ--RVIVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA--DLQAFYKE 1314
            GD I+R+LE+ GH+V+RLNHVGDWGTQFGMLIA+L++ +PD L K+  +A  DL   Y++
Sbjct: 143  GDCIARILEFRGHNVLRLNHVGDWGTQFGMLIAYLREAYPDALIKADALAIGDLVTLYRQ 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +KKRFDEDE F+  A + VV LQ+   D  KAW+++C+ SRR+FQ IYD L V LTERGE
Sbjct: 203  AKKRFDEDEQFQTTAREEVVKLQKGAEDSVKAWQLLCEQSRREFQVIYDLLGVKLTERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 1429
            SFY   +  +V  LE KGLLE D G K ++ E   +     +P+ + K+DGG+ Y T+DL
Sbjct: 263  SFYNPLLPDVVGELEAKGLLEEDQGAKCVFLEGFSNKSGERLPLIVQKTDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            AAIR RI E+ A  I+YVTD
Sbjct: 323  AAIRYRIREDGAQRIIYVTD 342


>gi|282889548|ref|ZP_06298090.1| hypothetical protein pah_c001o023 [Parachlamydia acanthamoebae str.
            Hall's coccus]
 gi|338176601|ref|YP_004653411.1| arginyl-tRNA synthetase [Parachlamydia acanthamoebae UV-7]
 gi|281500561|gb|EFB42838.1| hypothetical protein pah_c001o023 [Parachlamydia acanthamoebae str.
            Hall's coccus]
 gi|336480959|emb|CCB87557.1| Arginyl-tRNA synthetase [Parachlamydia acanthamoebae UV-7]
          Length = 586

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/598 (43%), Positives = 366/598 (61%), Gaps = 33/598 (5%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            LS  F  A+  AFPE    T      ++    +FG +QCN AM L K+   K     P D
Sbjct: 8    LSQKFQTAILSAFPEWDPNTPLPLEISQSTQAQFGHYQCNSAMKLAKVLGAK-----PRD 62

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG---VQP 597
            IA  I   V      N    ++I+K+E+A PGF+N+ L   Y  +++  I+++    ++ 
Sbjct: 63   IATRIIEHVD----VNLEGIRLIEKMEIAGPGFINITLDPAYLSQKLHRILLDSHLDIEL 118

Query: 598  PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
            P    K +++V+FSSPN AKE+HVGHLRSTIIGD+++RL E+LGHDV+RLNH+GDWGT F
Sbjct: 119  P--QHKQKIIVEFSSPNTAKELHVGHLRSTIIGDSLARLFEFLGHDVLRLNHIGDWGTAF 176

Query: 658  GMLIAHLQDKFPDYL--TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
            GMLIA+++ K P  L  T+   +  L  +YK+SK+RFD D  FKK +   VVALQ  DP 
Sbjct: 177  GMLIAYMKQKTPHVLDGTEKTDLQHLVQWYKKSKERFDSDADFKKTSQLEVVALQGGDPA 236

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
              KAWE+ICD+SR+ +Q+IYD L+V + ERGES+Y   +   V  LE KGL+ L DG K 
Sbjct: 237  ALKAWEIICDISRKAYQEIYDLLDVKIIERGESYYNPMLADTVADLEAKGLVTLSDGAKC 296

Query: 776  MWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            ++ E     +  S+P+ + KSDGG+ YDT+D+AAIRQR  EEKAD I+YVTD GQ +HF+
Sbjct: 297  IFLEGFQNREGASLPLMVQKSDGGYNYDTTDMAAIRQRTLEEKADRIIYVTDAGQSLHFQ 356

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
            ++ + A+KA  L+ +K R+D V FG+VLG D KKF+TRSG+T +L +LL   ++ +   L
Sbjct: 357  MIFQAAEKAHYLDASKVRVDHVPFGLVLGSDGKKFRTRSGETERLIDLLLAAVKHADQLL 416

Query: 891  KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
             +  R  E+   E  +  + +    +KYADL+ NR  DY FS+++ML   GNTA +L+YA
Sbjct: 417  IE--RSPEMPKEEREKLAKTLGIAAVKYADLACNRTGDYTFSYERMLRFEGNTAAFLMYA 474

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            Y R+A I R   IN   L++     P+ LEH  E +LA  L +  + L  V  DL  + L
Sbjct: 475  YVRVAGIKRK--INPA-LKIEELKDPIVLEHPSEISLAVHLAQFEEALEQVASDLLPNRL 531

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             EYLY ++  F+ F+ +C       EG  +     RL + E  AK MK+   IL ++T
Sbjct: 532  TEYLYGLAEKFNAFFRDCRV-----EGSPQ--QNSRLQICEIVAKTMKQGLSILGVQT 582



 Score =  308 bits (790), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 165/352 (46%), Positives = 226/352 (64%), Gaps = 21/352 (5%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           LS  F  A+  AFPE    T      ++    +FG +QCN AM L K+   K     P D
Sbjct: 8   LSQKFQTAILSAFPEWDPNTPLPLEISQSTQAQFGHYQCNSAMKLAKVLGAK-----PRD 62

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG---VQP 207
           IA  I   V      N    ++I+K+E+A PGF+N+ L   Y  +++  I+++    ++ 
Sbjct: 63  IATRIIEHVD----VNLEGIRLIEKMEIAGPGFINITLDPAYLSQKLHRILLDSHLDIEL 118

Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
           P    K +++V+FSSPN AKE+HVGHLRSTIIGD+++RL E+LGHDV+RLNH+GDWGT F
Sbjct: 119 P--QHKQKIIVEFSSPNTAKELHVGHLRSTIIGDSLARLFEFLGHDVLRLNHIGDWGTAF 176

Query: 268 GMLIAHLQDKFPDYL--TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 325
           GMLIA+++ K P  L  T+   +  L  +YK+SK+RFD D  FKK +   VVALQ  DP 
Sbjct: 177 GMLIAYMKQKTPHVLDGTEKTDLQHLVQWYKKSKERFDSDADFKKTSQLEVVALQGGDPA 236

Query: 326 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
             KAWE+ICD+SR+ +Q+IYD L+V + ERGES+Y   +   V  LE KGL+ L DG K 
Sbjct: 237 ALKAWEIICDISRKAYQEIYDLLDVKIIERGESYYNPMLADTVADLEAKGLVTLSDGAKC 296

Query: 386 MWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           ++ E     +  S+P+ + KSDGG+ YDT+D+AAIRQR  EEKAD I+YVTD
Sbjct: 297 IFLEGFQNREGASLPLMVQKSDGGYNYDTTDMAAIRQRTLEEKADRIIYVTD 348



 Score =  308 bits (790), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 165/352 (46%), Positives = 226/352 (64%), Gaps = 21/352 (5%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            LS  F  A+  AFPE    T      ++    +FG +QCN AM L K+   K     P D
Sbjct: 8    LSQKFQTAILSAFPEWDPNTPLPLEISQSTQAQFGHYQCNSAMKLAKVLGAK-----PRD 62

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG---VQP 1224
            IA  I   V      N    ++I+K+E+A PGF+N+ L   Y  +++  I+++    ++ 
Sbjct: 63   IATRIIEHVD----VNLEGIRLIEKMEIAGPGFINITLDPAYLSQKLHRILLDSHLDIEL 118

Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
            P    K +++V+FSSPN AKE+HVGHLRSTIIGD+++RL E+LGHDV+RLNH+GDWGT F
Sbjct: 119  P--QHKQKIIVEFSSPNTAKELHVGHLRSTIIGDSLARLFEFLGHDVLRLNHIGDWGTAF 176

Query: 1285 GMLIAHLQDKFPDYL--TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
            GMLIA+++ K P  L  T+   +  L  +YK+SK+RFD D  FKK +   VVALQ  DP 
Sbjct: 177  GMLIAYMKQKTPHVLDGTEKTDLQHLVQWYKKSKERFDSDADFKKTSQLEVVALQGGDPA 236

Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
              KAWE+ICD+SR+ +Q+IYD L+V + ERGES+Y   +   V  LE KGL+ L DG K 
Sbjct: 237  ALKAWEIICDISRKAYQEIYDLLDVKIIERGESYYNPMLADTVADLEAKGLVTLSDGAKC 296

Query: 1403 MWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++ E     +  S+P+ + KSDGG+ YDT+D+AAIRQR  EEKAD I+YVTD
Sbjct: 297  IFLEGFQNREGASLPLMVQKSDGGYNYDTTDMAAIRQRTLEEKADRIIYVTD 348


>gi|74227701|dbj|BAE35694.1| unnamed protein product [Mus musculus]
          Length = 447

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/391 (57%), Positives = 290/391 (74%), Gaps = 12/391 (3%)

Query: 470 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
           P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69  PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 530 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
           K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126 KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 590 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
           ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178 LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 650 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
           VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238 VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 710 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
           Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298 QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 770 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
           DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ +HF
Sbjct: 358 DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHF 416

Query: 830 RLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
           + +   A+  G  +P  T +  VGFGVVLGE
Sbjct: 417 QTIFAAAQMIGWYDPKVTLVTHVGFGVVLGE 447



 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/430 (52%), Positives = 302/430 (70%), Gaps = 34/430 (7%)

Query: 4   KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
           +E ++K   ++++ L   G +  S + + L  +  N KLK+RL IL+R++ EE +K    
Sbjct: 15  QEREIKALTAEIDRLKNCGCLEASPSLEQLREE--NLKLKYRLNILRRSLQEERRK---- 68

Query: 64  SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
                           P ++ +++   L +VF  A++ A+P+L +    V  + +    K
Sbjct: 69  ----------------PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---K 109

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+QCN AM + ++ K K +K +P +IA++I    T  L  N    K IDK+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGF 161

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +NV L + +  EQ+  ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
            DE FKKRAYQCVV LQ  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  
Sbjct: 282 ADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDR 341

Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
           M+ +V   E KG +++DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400

Query: 424 ADWIVYVTDH 433
           A+ I+YV D+
Sbjct: 401 ANKIIYVVDN 410



 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/354 (59%), Positives = 268/354 (75%), Gaps = 12/354 (3%)

Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
            P ++ +++   L +VF  A++ A+P+L +    V  + +    KFGD+QCN AM + ++ 
Sbjct: 69   PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K K +K +P +IA++I    T  L  N    K IDK+E+A PGF+NV L + +  EQ+  
Sbjct: 126  KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177

Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            ++VNGVQ P L  K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178  LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238  VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  +PD  KAW +ICDVSR +F+KIYD L++TL ERGESFYQ  M+ +V   E KG +++
Sbjct: 298  QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            DDGRKI++     S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358  DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410


>gi|351724403|ref|NP_001236544.1| arginyl-tRNA synthetase [Glycine max]
 gi|207366683|emb|CAR64264.1| arginyl-tRNA synthetase [Glycine max]
          Length = 597

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/604 (42%), Positives = 376/604 (62%), Gaps = 36/604 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASV--ASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            SV+  L+  F  ++++  P+  D   S+   + N+  + KF D+QCN+AM L   F    
Sbjct: 11   SVKKQLAKEFEESLRITVPDEPDVVPSIDPCAANKAGI-KFADYQCNNAMGL---FAKMK 66

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
             K+  F   Q++   + + L      +++I+   VA PGFVN+ LS+ +  ++++ ++++
Sbjct: 67   GKQTGFRGPQAVGQAILNHLPQ----SEMIESCSVAGPGFVNIVLSKKWIAQRLERLLID 122

Query: 594  GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG-HDVVRLNHV 650
            G+    P L  K  VLVDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+     ++R NH+
Sbjct: 123  GIDKWAPRLPVKT-VLVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSRVETLIRRNHL 181

Query: 651  GDWGTQFGMLIAHLQDKFP---DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            GDWGTQFGMLIAHL D +P   D+      I DLQAFYK SK RFD D  FK RA Q VV
Sbjct: 182  GDWGTQFGMLIAHLFDTYPNPEDF--NEAAIGDLQAFYKASKVRFDNDPEFKLRAQQSVV 239

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  +  Y +AW+ ICD+S+ +F+K+Y RL V L  RGES+Y   + Q +  L+  GL+
Sbjct: 240  RLQSGEEKYHRAWQQICDISQAEFEKVYQRLGVRLEARGESYYNDLIPQTLERLDNLGLI 299

Query: 768  ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
            E DDG ++++ E   +IP+  VK DGG+ Y ++DLAA+  R+  E  +W +YVTD+GQ  
Sbjct: 300  EEDDGARVIFVEGV-NIPIIAVKRDGGYNYSSTDLAALWNRLNVENVEWNIYVTDVGQWQ 358

Query: 828  HFRLLEECAKKAGILNPNK----TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            HF ++ +  ++AG L PN      +   +GFG+VLGED K+F+TRS +TV+L ELLDE  
Sbjct: 359  HFDMVFKAFRRAGWL-PNHENEFPKCTHIGFGLVLGEDGKRFRTRSSETVRLVELLDEAK 417

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
            RR    L +++   + +  E+ +  +AV YG +KYADL  NR  +Y FSFD+ML+D+GNT
Sbjct: 418  RRCKASLLERDAVKDWSEEEIEKTAEAVGYGAVKYADLRINRLTNYTFSFDQMLNDKGNT 477

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            AVYL YA+ RI SI R +G + E+++   ++  +   HE E AL   L++  +V      
Sbjct: 478  AVYLQYAHARICSIMRKSGKDMEEIK---KNGNIVSNHEDERALGLHLIQFPEVFEESLT 534

Query: 1004 DLCLHHLCEYLYDISTAFS-EFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
            +L  + LCEYLY+++  F+ +FY NC  +    E       T RLLL EAT  VM++CF 
Sbjct: 535  NLLPNVLCEYLYNLTEIFTKKFYTNCQVVGSPEE-------TSRLLLCEATVTVMRQCFY 587

Query: 1063 ILNI 1066
            +L I
Sbjct: 588  LLGI 591



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/355 (43%), Positives = 224/355 (63%), Gaps = 20/355 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASV--ASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           SV+  L+  F  ++++  P+  D   S+   + N+  + KF D+QCN+AM L   F    
Sbjct: 11  SVKKQLAKEFEESLRITVPDEPDVVPSIDPCAANKAGI-KFADYQCNNAMGL---FAKMK 66

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
            K+  F   Q++   + + L      +++I+   VA PGFVN+ LS+ +  ++++ ++++
Sbjct: 67  GKQTGFRGPQAVGQAILNHLPQ----SEMIESCSVAGPGFVNIVLSKKWIAQRLERLLID 122

Query: 204 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG-HDVVRLNHV 260
           G+    P L  K  VLVDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+     ++R NH+
Sbjct: 123 GIDKWAPRLPVKT-VLVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSRVETLIRRNHL 181

Query: 261 GDWGTQFGMLIAHLQDKFP---DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 317
           GDWGTQFGMLIAHL D +P   D+      I DLQAFYK SK RFD D  FK RA Q VV
Sbjct: 182 GDWGTQFGMLIAHLFDTYPNPEDF--NEAAIGDLQAFYKASKVRFDNDPEFKLRAQQSVV 239

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 377
            LQ  +  Y +AW+ ICD+S+ +F+K+Y RL V L  RGES+Y   + Q +  L+  GL+
Sbjct: 240 RLQSGEEKYHRAWQQICDISQAEFEKVYQRLGVRLEARGESYYNDLIPQTLERLDNLGLI 299

Query: 378 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           E DDG ++++ E   +IP+  VK DGG+ Y ++DLAA+  R+  E  +W +YVTD
Sbjct: 300 EEDDGARVIFVEGV-NIPIIAVKRDGGYNYSSTDLAALWNRLNVENVEWNIYVTD 353



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/355 (43%), Positives = 224/355 (63%), Gaps = 20/355 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASV--ASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            SV+  L+  F  ++++  P+  D   S+   + N+  + KF D+QCN+AM L   F    
Sbjct: 11   SVKKQLAKEFEESLRITVPDEPDVVPSIDPCAANKAGI-KFADYQCNNAMGL---FAKMK 66

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
             K+  F   Q++   + + L      +++I+   VA PGFVN+ LS+ +  ++++ ++++
Sbjct: 67   GKQTGFRGPQAVGQAILNHLPQ----SEMIESCSVAGPGFVNIVLSKKWIAQRLERLLID 122

Query: 1221 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLG-HDVVRLNHV 1277
            G+    P L  K  VLVDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+     ++R NH+
Sbjct: 123  GIDKWAPRLPVKT-VLVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSRVETLIRRNHL 181

Query: 1278 GDWGTQFGMLIAHLQDKFP---DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            GDWGTQFGMLIAHL D +P   D+      I DLQAFYK SK RFD D  FK RA Q VV
Sbjct: 182  GDWGTQFGMLIAHLFDTYPNPEDF--NEAAIGDLQAFYKASKVRFDNDPEFKLRAQQSVV 239

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  +  Y +AW+ ICD+S+ +F+K+Y RL V L  RGES+Y   + Q +  L+  GL+
Sbjct: 240  RLQSGEEKYHRAWQQICDISQAEFEKVYQRLGVRLEARGESYYNDLIPQTLERLDNLGLI 299

Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            E DDG ++++ E   +IP+  VK DGG+ Y ++DLAA+  R+  E  +W +YVTD
Sbjct: 300  EEDDGARVIFVEGV-NIPIIAVKRDGGYNYSSTDLAALWNRLNVENVEWNIYVTD 353


>gi|411117389|ref|ZP_11389876.1| arginyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
 gi|410713492|gb|EKQ70993.1| arginyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
          Length = 585

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/569 (44%), Positives = 363/569 (63%), Gaps = 38/569 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKP 571
            KFGD+Q N AM+L K        K P  IA Q +  +  SEL   P         E+A P
Sbjct: 38   KFGDYQANVAMSLAKPLG-----KAPRAIAEQLVQHLDVSELCEPP---------EIAGP 83

Query: 572  GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            GF+N+ L   Y   Q+  +  +   G+ P  + +  RV+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINLKLKPTYLAAQLVAMQADARLGIAP--VKQPQRVIVDFSSPNIAKEMHVGHLRSTI 141

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYK 686
            IGD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +  +   DL AFYK
Sbjct: 142  IGDCIARILEFQGHDVLRLNHVGDWGTQFGMLITYLKEVAPEALTTANAVDLGDLVAFYK 201

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 746
            ++K+RFDEDE F++ A   VV LQ  DPD ++AWE++CD SR++FQ IYD L++ L ERG
Sbjct: 202  KAKQRFDEDEAFRETARLEVVKLQAGDPDSRRAWELLCDQSRQEFQVIYDLLDIRLIERG 261

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
            ESFY   +  +V  L+K GLL  DDG K ++ E     D   +P+ + KSDGG+ Y T+D
Sbjct: 262  ESFYNPLLPSIVEDLDKAGLLVEDDGAKCVFLEGFTNKDGNPLPLIVQKSDGGYNYATTD 321

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAA+R RI+++ +D I+Y+TD GQ  HF  + + A++AG L P+   +  V FG+V GED
Sbjct: 322  LAALRYRIQQDHSDRIIYITDAGQANHFAQVFQVARRAGWL-PDTVEVVHVPFGLVQGED 380

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT--ELTPTELSEAQQAVAYGCIKYA 919
             KK KTRSG+T++L +LLDE + R+   L+ + +    + T   ++   Q V    +KYA
Sbjct: 381  GKKLKTRSGETIRLRDLLDEAVDRARTDLETRIQFEGRQETAEFINHVAQVVGISAVKYA 440

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  +Y+FSFDKML   GNTA Y+LYAY R+  I+R   I+ E L   A+   + L
Sbjct: 441  DLSQNRTSNYIFSFDKMLALNGNTAPYMLYAYVRVQGISRKGQIDFEALSADAK---ILL 497

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
            + + EF LAK LL++++++  V +DL  + LC+YL+++S  F++FYD C  ++ +     
Sbjct: 498  QEDTEFTLAKHLLQLDEIVEEVGQDLFPNKLCQYLFELSQKFNQFYDRCPVLQAE----- 552

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            + + T RL L + TA+ +K    +L I T
Sbjct: 553  EPLRTSRLALCDLTARTLKLGLFLLGIPT 581



 Score =  295 bits (756), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 162/333 (48%), Positives = 217/333 (65%), Gaps = 30/333 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKP 181
           KFGD+Q N AM+L K        K P  IA Q +  +  SEL   P         E+A P
Sbjct: 38  KFGDYQANVAMSLAKPLG-----KAPRAIAEQLVQHLDVSELCEPP---------EIAGP 83

Query: 182 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           GF+N+ L   Y   Q+  +  +   G+ P  + +  RV+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84  GFINLKLKPTYLAAQLVAMQADARLGIAP--VKQPQRVIVDFSSPNIAKEMHVGHLRSTI 141

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYK 296
           IGD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +  +   DL AFYK
Sbjct: 142 IGDCIARILEFQGHDVLRLNHVGDWGTQFGMLITYLKEVAPEALTTANAVDLGDLVAFYK 201

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 356
           ++K+RFDEDE F++ A   VV LQ  DPD ++AWE++CD SR++FQ IYD L++ L ERG
Sbjct: 202 KAKQRFDEDEAFRETARLEVVKLQAGDPDSRRAWELLCDQSRQEFQVIYDLLDIRLIERG 261

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
           ESFY   +  +V  L+K GLL  DDG K ++ E     D   +P+ + KSDGG+ Y T+D
Sbjct: 262 ESFYNPLLPSIVEDLDKAGLLVEDDGAKCVFLEGFTNKDGNPLPLIVQKSDGGYNYATTD 321

Query: 412 LAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           LAA+R RI+++ +D I+Y+TD      + QV Q
Sbjct: 322 LAALRYRIQQDHSDRIIYITDAGQANHFAQVFQ 354



 Score =  295 bits (756), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 162/333 (48%), Positives = 217/333 (65%), Gaps = 30/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKP 1198
            KFGD+Q N AM+L K        K P  IA Q +  +  SEL   P         E+A P
Sbjct: 38   KFGDYQANVAMSLAKPLG-----KAPRAIAEQLVQHLDVSELCEPP---------EIAGP 83

Query: 1199 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            GF+N+ L   Y   Q+  +  +   G+ P  + +  RV+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84   GFINLKLKPTYLAAQLVAMQADARLGIAP--VKQPQRVIVDFSSPNIAKEMHVGHLRSTI 141

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYK 1313
            IGD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +  +   DL AFYK
Sbjct: 142  IGDCIARILEFQGHDVLRLNHVGDWGTQFGMLITYLKEVAPEALTTANAVDLGDLVAFYK 201

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
            ++K+RFDEDE F++ A   VV LQ  DPD ++AWE++CD SR++FQ IYD L++ L ERG
Sbjct: 202  KAKQRFDEDEAFRETARLEVVKLQAGDPDSRRAWELLCDQSRQEFQVIYDLLDIRLIERG 261

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
            ESFY   +  +V  L+K GLL  DDG K ++ E     D   +P+ + KSDGG+ Y T+D
Sbjct: 262  ESFYNPLLPSIVEDLDKAGLLVEDDGAKCVFLEGFTNKDGNPLPLIVQKSDGGYNYATTD 321

Query: 1429 LAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            LAA+R RI+++ +D I+Y+TD      + QV Q
Sbjct: 322  LAALRYRIQQDHSDRIIYITDAGQANHFAQVFQ 354


>gi|126649241|ref|XP_001388293.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II]
 gi|126117131|gb|EAZ51231.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II]
          Length = 616

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/615 (42%), Positives = 362/615 (58%), Gaps = 45/615 (7%)

Query: 485  FTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQ 543
            F  A++  FPE  DK A +A +N      FGD+QCN  M +   FK K E  K+P DI  
Sbjct: 12   FNEAIKNLFPEF-DKEAIIAISNPN----FGDYQCNSCMTIFSQFKGKLEGIKSPRDIGM 66

Query: 544  SIASVVTSELATNPSLAKVIDKIEVAKPGFVNV---------FLSRVYAGEQIKDIIVNG 594
             I   +      N  L+     IEVA  GF+ +          LS++   +++K      
Sbjct: 67   KIKDYIEK----NGDLSINFKSIEVAPQGFITIKLSDEFIQNNLSKLQEMDEVKVTPTMK 122

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                +  K  +V+VDFSSPNIAKEMHVGHLRSTIIGDT  R+LEYLG +V+R+NHVGDWG
Sbjct: 123  FHCKSGRKTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTCRILEYLGFEVLRVNHVGDWG 182

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLI +L++++P ++   P I+DLQ FYK SKKRFD D  FK R+ Q VV LQ  D 
Sbjct: 183  TQFGMLIEYLKEEYPTFVENLPEISDLQEFYKNSKKRFDTDPQFKLRSQQNVVMLQGGDQ 242

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            D   AW+ IC+VSR +FQKIYDRL + L E GES+Y   +  +V  L++KG+L+LD+G +
Sbjct: 243  DALTAWKKICEVSRVEFQKIYDRLGIRLEEFGESYYNDMIPGVVKMLDEKGILKLDNGAQ 302

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
             ++ +    IP+  VKSDGG+ YD++DLAAI  R+    ADW++Y TD+GQ  HF  L +
Sbjct: 303  CVYTK-INEIPLMAVKSDGGYGYDSTDLAAIHHRLITLDADWVIYTTDMGQEEHFMKLFD 361

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A+  G  +P+ TR+ F+GFGV+ GED KKFKTRSGD VKL+EL+DEG+ R+  +L D+ 
Sbjct: 362  VAETMGWHDPSNTRLFFIGFGVIQGEDGKKFKTRSGDVVKLTELIDEGVARAKKELVDRR 421

Query: 895  R-----------------HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
                              H  +  ++L      + +  IKY DL  NR  +Y FSFD+ML
Sbjct: 422  NQRRSDQTNKSNTDVEVDHPNIDDSDLDLMANTIGHAAIKYFDLKQNRLTNYRFSFDRML 481

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGI----NSEDLRVAAQSTPVSLEHEKEFALAKTLLR 993
            D +GNTAVYLLYAY RI +I R        NS  ++    +  + + +  E  L+  LLR
Sbjct: 482  DPKGNTAVYLLYAYARICAIFRKVEFIQSDNSMVIKQKVSNFKLKISNNVERKLSIQLLR 541

Query: 994  MNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEAT 1053
              +V   +  D   + L +Y Y++S  F++FY  C  I  + +     +   RLLL   T
Sbjct: 542  FPEVFDGILNDFFPNRLADYCYELSECFAQFYTECRIIGLEEQ----QLEQSRLLLCFLT 597

Query: 1054 AKVMKKCFDILNIRT 1068
             +++ K  D+L + T
Sbjct: 598  KQILLKGLDLLGVET 612



 Score =  300 bits (768), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 164/348 (47%), Positives = 219/348 (62%), Gaps = 20/348 (5%)

Query: 95  FTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQ 153
           F  A++  FPE  DK A +A +N      FGD+QCN  M +   FK K E  K+P DI  
Sbjct: 12  FNEAIKNLFPEF-DKEAIIAISNPN----FGDYQCNSCMTIFSQFKGKLEGIKSPRDIGM 66

Query: 154 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNV---------FLSRVYAGEQIKDIIVNG 204
            I   +      N  L+     IEVA  GF+ +          LS++   +++K      
Sbjct: 67  KIKDYIEK----NGDLSINFKSIEVAPQGFITIKLSDEFIQNNLSKLQEMDEVKVTPTMK 122

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
               +  K  +V+VDFSSPNIAKEMHVGHLRSTIIGDT  R+LEYLG +V+R+NHVGDWG
Sbjct: 123 FHCKSGRKTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTCRILEYLGFEVLRVNHVGDWG 182

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLI +L++++P ++   P I+DLQ FYK SKKRFD D  FK R+ Q VV LQ  D 
Sbjct: 183 TQFGMLIEYLKEEYPTFVENLPEISDLQEFYKNSKKRFDTDPQFKLRSQQNVVMLQGGDQ 242

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
           D   AW+ IC+VSR +FQKIYDRL + L E GES+Y   +  +V  L++KG+L+LD+G +
Sbjct: 243 DALTAWKKICEVSRVEFQKIYDRLGIRLEEFGESYYNDMIPGVVKMLDEKGILKLDNGAQ 302

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            ++ +    IP+  VKSDGG+ YD++DLAAI  R+    ADW++Y TD
Sbjct: 303 CVYTK-INEIPLMAVKSDGGYGYDSTDLAAIHHRLITLDADWVIYTTD 349



 Score =  300 bits (768), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 164/348 (47%), Positives = 219/348 (62%), Gaps = 20/348 (5%)

Query: 1112 FTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK-KNPFDIAQ 1170
            F  A++  FPE  DK A +A +N      FGD+QCN  M +   FK K E  K+P DI  
Sbjct: 12   FNEAIKNLFPEF-DKEAIIAISNPN----FGDYQCNSCMTIFSQFKGKLEGIKSPRDIGM 66

Query: 1171 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNV---------FLSRVYAGEQIKDIIVNG 1221
             I   +      N  L+     IEVA  GF+ +          LS++   +++K      
Sbjct: 67   KIKDYIEK----NGDLSINFKSIEVAPQGFITIKLSDEFIQNNLSKLQEMDEVKVTPTMK 122

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                +  K  +V+VDFSSPNIAKEMHVGHLRSTIIGDT  R+LEYLG +V+R+NHVGDWG
Sbjct: 123  FHCKSGRKTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTCRILEYLGFEVLRVNHVGDWG 182

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLI +L++++P ++   P I+DLQ FYK SKKRFD D  FK R+ Q VV LQ  D 
Sbjct: 183  TQFGMLIEYLKEEYPTFVENLPEISDLQEFYKNSKKRFDTDPQFKLRSQQNVVMLQGGDQ 242

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D   AW+ IC+VSR +FQKIYDRL + L E GES+Y   +  +V  L++KG+L+LD+G +
Sbjct: 243  DALTAWKKICEVSRVEFQKIYDRLGIRLEEFGESYYNDMIPGVVKMLDEKGILKLDNGAQ 302

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++ +    IP+  VKSDGG+ YD++DLAAI  R+    ADW++Y TD
Sbjct: 303  CVYTK-INEIPLMAVKSDGGYGYDSTDLAAIHHRLITLDADWVIYTTD 349


>gi|222617773|gb|EEE53905.1| hypothetical protein OsJ_00455 [Oryza sativa Japonica Group]
          Length = 588

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/603 (42%), Positives = 363/603 (60%), Gaps = 44/603 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 534
            SV   L  + T +++   P+L      V    E     FGD+QCN+AM++  +I      
Sbjct: 12   SVEQQLCTLITSSLRATVPDL-----DVEPMLEVSKPGFGDYQCNNAMSVFSRIRGSATN 66

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             +NP  + Q+IA+        N   + +I+ I VA PG++N+ LS  +  ++I+D++V G
Sbjct: 67   FRNPMAVGQAIAN--------NLPQSNIIESISVAGPGYINITLSSNWIAQRIQDMLVCG 118

Query: 595  VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            ++   P L  K R ++DFSSPNIAKEMHVGH+RSTIIGDT++ + E+   +V+R NHVGD
Sbjct: 119  IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGD 177

Query: 653  WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            WGTQFGMLI  L ++FPD+    +  + DLQ+FYK SKKRFD+D  FK+RA Q       
Sbjct: 178  WGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDFKERARQA-----G 232

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             +  Y+ AW+ IC +SR +F  +Y RLNV L E+GESFY  ++  ++  L  KGL+    
Sbjct: 233  GEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESFYNPYIPPVLEELTNKGLIVESK 292

Query: 772  GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            G ++++ ED    P+ ++K DGGF Y ++DLAA+  R+  EKA+WI+YVTD+GQ  HF +
Sbjct: 293  GARVIFVEDH---PLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQRHFHM 349

Query: 832  LEECAKKAGIL---NPNK-TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS- 886
            L   AK AG L   N  K  +   VGFG+VLG D K+F+TR  + V+L +LLDE   RS 
Sbjct: 350  LFTAAKMAGWLPEQNGKKYPKASHVGFGLVLGSDGKRFRTRCSEVVRLVDLLDEAKARSK 409

Query: 887  ---LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
               + +     +  + T  EL    +A+ YG +KY+DL +NR  DY FSFD+ML D+GNT
Sbjct: 410  AQLIKRFTGNGQIADWTDDELDRTSEAIGYGAVKYSDLKNNRLTDYTFSFDQMLSDKGNT 469

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            AVYL YA+ RI SI R A  + E L++      ++L H  E  L   L++  +V+     
Sbjct: 470  AVYLQYAHARICSIIRKASKDVEKLKMTG---AITLGHPYERFLGLHLIQFTEVVEQACA 526

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            DL  H LC+YLY +S  FS+FY NC  +    E       T RLLL EAT  +M++CF +
Sbjct: 527  DLQPHRLCDYLYSLSLTFSKFYTNCQVVGSPEE-------TSRLLLCEATGIIMRQCFHL 579

Query: 1064 LNI 1066
            L I
Sbjct: 580  LGI 582



 Score =  283 bits (725), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 153/364 (42%), Positives = 225/364 (61%), Gaps = 29/364 (7%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 144
           SV   L  + T +++   P+L      V    E     FGD+QCN+AM++  +I      
Sbjct: 12  SVEQQLCTLITSSLRATVPDL-----DVEPMLEVSKPGFGDYQCNNAMSVFSRIRGSATN 66

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            +NP  + Q+IA+        N   + +I+ I VA PG++N+ LS  +  ++I+D++V G
Sbjct: 67  FRNPMAVGQAIAN--------NLPQSNIIESISVAGPGYINITLSSNWIAQRIQDMLVCG 118

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           ++   P L  K R ++DFSSPNIAKEMHVGH+RSTIIGDT++ + E+   +V+R NHVGD
Sbjct: 119 IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGD 177

Query: 263 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           WGTQFGMLI  L ++FPD+    +  + DLQ+FYK SKKRFD+D  FK+RA Q       
Sbjct: 178 WGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDFKERARQA-----G 232

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            +  Y+ AW+ IC +SR +F  +Y RLNV L E+GESFY  ++  ++  L  KGL+    
Sbjct: 233 GEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESFYNPYIPPVLEELTNKGLIVESK 292

Query: 382 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQ 438
           G ++++ ED    P+ ++K DGGF Y ++DLAA+  R+  EKA+WI+YVTD    R +H 
Sbjct: 293 GARVIFVEDH---PLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQRHFHM 349

Query: 439 VLQA 442
           +  A
Sbjct: 350 LFTA 353



 Score =  282 bits (722), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/362 (41%), Positives = 224/362 (61%), Gaps = 29/362 (8%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMAL-CKIFKDKGE 1161
            SV   L  + T +++   P+L      V    E     FGD+QCN+AM++  +I      
Sbjct: 12   SVEQQLCTLITSSLRATVPDL-----DVEPMLEVSKPGFGDYQCNNAMSVFSRIRGSATN 66

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             +NP  + Q+IA+        N   + +I+ I VA PG++N+ LS  +  ++I+D++V G
Sbjct: 67   FRNPMAVGQAIAN--------NLPQSNIIESISVAGPGYINITLSSNWIAQRIQDMLVCG 118

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            ++   P L  K R ++DFSSPNIAKEMHVGH+RSTIIGDT++ + E+   +V+R NHVGD
Sbjct: 119  IKTWAPILPVK-RAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGD 177

Query: 1280 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            WGTQFGMLI  L ++FPD+    +  + DLQ+FYK SKKRFD+D  FK+RA Q       
Sbjct: 178  WGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDFKERARQA-----G 232

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +  Y+ AW+ IC +SR +F  +Y RLNV L E+GESFY  ++  ++  L  KGL+    
Sbjct: 233  GEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESFYNPYIPPVLEELTNKGLIVESK 292

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQ 1455
            G ++++ ED    P+ ++K DGGF Y ++DLAA+  R+  EKA+WI+YVTD    R +H 
Sbjct: 293  GARVIFVEDH---PLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQRHFHM 349

Query: 1456 VL 1457
            + 
Sbjct: 350  LF 351


>gi|427710258|ref|YP_007052635.1| arginyl-tRNA synthetase [Nostoc sp. PCC 7107]
 gi|427362763|gb|AFY45485.1| arginyl-tRNA synthetase [Nostoc sp. PCC 7107]
          Length = 588

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/600 (43%), Positives = 375/600 (62%), Gaps = 43/600 (7%)

Query: 485  FTHAVQVAFPELGDKTASV-----ASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 539
            F  A+  AF   GD+ A+V      + N K    FGD+Q N A++L K    +       
Sbjct: 12   FEQAMMAAF---GDEYATVDPILVPAGNPK----FGDYQANVALSLSKKLGQQ------- 57

Query: 540  DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPP 598
               ++IAS +  +L     ++++ +  E+A PGF+N+ L   Y   Q++ I  +  +  P
Sbjct: 58   --PRAIASAIVEKL----DVSQICEPPEIAGPGFINLRLKTAYLQAQLQAIYPDSRLGVP 111

Query: 599  TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFG 658
                  + +VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GHDV+RLNHVGDWGTQFG
Sbjct: 112  QAKTPQQEIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFG 171

Query: 659  MLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 716
            MLI +L++ +P  LT +    I DL +FY+++K+RFD DE F++ A Q VV LQ    D 
Sbjct: 172  MLITYLREVYPQALTTANALDIGDLVSFYRQAKQRFDADETFQETARQEVVKLQAGAADT 231

Query: 717  KKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIM 776
              AW+++C+ SR++FQ IYD L++ L ERGESFY   +  +V  L K GLL  + G K++
Sbjct: 232  LHAWKLLCEQSRKEFQVIYDLLDIHLNERGESFYNPLLPAIVEDLAKSGLLVENQGAKVV 291

Query: 777  WGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            + E   +     +P+ + KSDGG+ Y T+DLAA+R RI+++ A  I+YVTD GQ  HF  
Sbjct: 292  FLEGYTNREGEPLPLIVKKSDGGYNYATTDLAALRYRIQKDAAKRIIYVTDAGQSNHFAQ 351

Query: 832  LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
              + A+KAG + P+   +  V FG+VLGED K+ KTR+G++V+L +LLDE + R+   L+
Sbjct: 352  FFQVARKAGWI-PDDVELVHVPFGLVLGEDGKRIKTRAGESVRLRDLLDEAIIRARTDLE 410

Query: 892  DKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
             + +    T T   ++   Q +    +KYADLS NR  +Y+FS++KMLD +GNTA Y+LY
Sbjct: 411  QRLQEDNRTETADFIANVAQVIGISAVKYADLSQNRTSNYIFSYNKMLDLKGNTAPYMLY 470

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            AY RI  I+R  GIN E L   AQ   V LEHE EFALAK LL++ +V+  V +DL  + 
Sbjct: 471  AYARIQGISRKGGINFEQLGDNAQ---VILEHETEFALAKYLLQLGEVVSTVEQDLLPNR 527

Query: 1010 LCEYLYDISTAFSEFYDNCYCIE-KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            LCEYLY++S  F+ FYD  + +   DAE   +   T RL+L + TA+ +K    +L I+ 
Sbjct: 528  LCEYLYELSKKFNVFYDRNHGVRVLDAE---EPQRTSRLVLCDLTARTLKLGLSLLGIQV 584



 Score =  275 bits (703), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/351 (43%), Positives = 221/351 (62%), Gaps = 33/351 (9%)

Query: 95  FTHAVQVAFPELGDKTASV-----ASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 149
           F  A+  AF   GD+ A+V      + N K    FGD+Q N A++L K    +       
Sbjct: 12  FEQAMMAAF---GDEYATVDPILVPAGNPK----FGDYQANVALSLSKKLGQQ------- 57

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPP 208
              ++IAS +  +L     ++++ +  E+A PGF+N+ L   Y   Q++ I  +  +  P
Sbjct: 58  --PRAIASAIVEKL----DVSQICEPPEIAGPGFINLRLKTAYLQAQLQAIYPDSRLGVP 111

Query: 209 TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFG 268
                 + +VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GHDV+RLNHVGDWGTQFG
Sbjct: 112 QAKTPQQEIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFG 171

Query: 269 MLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 326
           MLI +L++ +P  LT +    I DL +FY+++K+RFD DE F++ A Q VV LQ    D 
Sbjct: 172 MLITYLREVYPQALTTANALDIGDLVSFYRQAKQRFDADETFQETARQEVVKLQAGAADT 231

Query: 327 KKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIM 386
             AW+++C+ SR++FQ IYD L++ L ERGESFY   +  +V  L K GLL  + G K++
Sbjct: 232 LHAWKLLCEQSRKEFQVIYDLLDIHLNERGESFYNPLLPAIVEDLAKSGLLVENQGAKVV 291

Query: 387 WGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           + E   +     +P+ + KSDGG+ Y T+DLAA+R RI+++ A  I+YVTD
Sbjct: 292 FLEGYTNREGEPLPLIVKKSDGGYNYATTDLAALRYRIQKDAAKRIIYVTD 342



 Score =  275 bits (703), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/351 (43%), Positives = 221/351 (62%), Gaps = 33/351 (9%)

Query: 1112 FTHAVQVAFPELGDKTASV-----ASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 1166
            F  A+  AF   GD+ A+V      + N K    FGD+Q N A++L K    +       
Sbjct: 12   FEQAMMAAF---GDEYATVDPILVPAGNPK----FGDYQANVALSLSKKLGQQ------- 57

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPP 1225
               ++IAS +  +L     ++++ +  E+A PGF+N+ L   Y   Q++ I  +  +  P
Sbjct: 58   --PRAIASAIVEKL----DVSQICEPPEIAGPGFINLRLKTAYLQAQLQAIYPDSRLGVP 111

Query: 1226 TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFG 1285
                  + +VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GHDV+RLNHVGDWGTQFG
Sbjct: 112  QAKTPQQEIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFG 171

Query: 1286 MLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 1343
            MLI +L++ +P  LT +    I DL +FY+++K+RFD DE F++ A Q VV LQ    D 
Sbjct: 172  MLITYLREVYPQALTTANALDIGDLVSFYRQAKQRFDADETFQETARQEVVKLQAGAADT 231

Query: 1344 KKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIM 1403
              AW+++C+ SR++FQ IYD L++ L ERGESFY   +  +V  L K GLL  + G K++
Sbjct: 232  LHAWKLLCEQSRKEFQVIYDLLDIHLNERGESFYNPLLPAIVEDLAKSGLLVENQGAKVV 291

Query: 1404 WGEDRGS-----IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            + E   +     +P+ + KSDGG+ Y T+DLAA+R RI+++ A  I+YVTD
Sbjct: 292  FLEGYTNREGEPLPLIVKKSDGGYNYATTDLAALRYRIQKDAAKRIIYVTD 342


>gi|16332034|ref|NP_442762.1| arginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|383323777|ref|YP_005384631.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|383326946|ref|YP_005387800.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803 substr. PCC-P]
 gi|383492830|ref|YP_005410507.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|384438098|ref|YP_005652823.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803]
 gi|451816186|ref|YP_007452638.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803]
 gi|2501048|sp|Q55486.1|SYR_SYNY3 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|1001346|dbj|BAA10833.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803]
 gi|339275131|dbj|BAK51618.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803]
 gi|359273097|dbj|BAL30616.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|359276267|dbj|BAL33785.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|359279437|dbj|BAL36954.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803 substr. PCC-P]
 gi|407960329|dbj|BAM53569.1| arginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|451782155|gb|AGF53124.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803]
          Length = 584

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/602 (43%), Positives = 368/602 (61%), Gaps = 35/602 (5%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +S+   L+D F  A++  FP   D T            KFGDFQCN A+ L K       
Sbjct: 2    VSILTQLNDHFAQALEGQFPS--DVTLPTPLVVPASNPKFGDFQCNIALPLAKQLG---- 55

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             + P  IA  I   V        +L+++ + + +A PGF+N+ L   Y GEQ+  +  N 
Sbjct: 56   -QPPRAIAMEIVDKV--------NLSEICEPLTIAGPGFINIKLLPDYLGEQLIKLQQNQ 106

Query: 595  VQPPTLNK-KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
                +L K + R++VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ G+DV+RLNHVGDW
Sbjct: 107  QLGVSLVKGEERIVVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVLRLNHVGDW 166

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            GTQFGMLI +L++ +P+ L  +    I DL  FYK++K+RFD+DE F++ + Q VVALQ 
Sbjct: 167  GTQFGMLITYLKEVYPEALVTADALDIGDLVTFYKQAKQRFDQDEQFRETSRQAVVALQA 226

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             D    KAW+++C+ SRR+FQ IYD L++T+ ERGESFY   +  +V  L++K LL  D+
Sbjct: 227  GDAKSIKAWQLLCEQSRREFQLIYDCLDITIEERGESFYNPFLPGVVELLQEKDLLVEDN 286

Query: 772  GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G + ++      +D   +P+ + KSDGG+ Y T+DLAA+  R+  + A+ I+YVTD GQ 
Sbjct: 287  GAQCVFLDGFTNKDGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTDAGQA 346

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             HF    + A+KAGIL  + T++  V FG+V GED KK KTR+GDT++L +LL E + R+
Sbjct: 347  NHFAQFFQVAEKAGILT-DPTQVVHVPFGLVKGEDGKKLKTRAGDTIRLKDLLTEAVTRA 405

Query: 887  LDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
               L+ +    E + TE   +E  Q V  G +KYADLS NR  DYVFSFDKML  +GNTA
Sbjct: 406  RQDLETRLTAEERSETEEFKTEVAQRVGIGAVKYADLSQNRTSDYVFSFDKMLALQGNTA 465

Query: 945  VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
             Y+LYAY RI SI+R  GI+   +     S  + L    E  LAK LL+  DV+  V   
Sbjct: 466  PYMLYAYARIQSISREGGIDFAQM----DSGEIVLTEPTELVLAKNLLQFADVIETVEIS 521

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            L  + LC+YLY++S  F+ FY+NC  ++     +       RLLL + TA+ +K    +L
Sbjct: 522  LLPNRLCDYLYELSKVFNRFYENCPVLKASDPQR-----GSRLLLCDLTARTLKLGLSLL 576

Query: 1065 NI 1066
             I
Sbjct: 577  GI 578



 Score =  292 bits (748), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 170/421 (40%), Positives = 248/421 (58%), Gaps = 30/421 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           +S+   L+D F  A++  FP   D T            KFGDFQCN A+ L K       
Sbjct: 2   VSILTQLNDHFAQALEGQFPS--DVTLPTPLVVPASNPKFGDFQCNIALPLAKQLG---- 55

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            + P  IA  I   V        +L+++ + + +A PGF+N+ L   Y GEQ+  +  N 
Sbjct: 56  -QPPRAIAMEIVDKV--------NLSEICEPLTIAGPGFINIKLLPDYLGEQLIKLQQNQ 106

Query: 205 VQPPTLNK-KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
               +L K + R++VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ G+DV+RLNHVGDW
Sbjct: 107 QLGVSLVKGEERIVVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVLRLNHVGDW 166

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           GTQFGMLI +L++ +P+ L  +    I DL  FYK++K+RFD+DE F++ + Q VVALQ 
Sbjct: 167 GTQFGMLITYLKEVYPEALVTADALDIGDLVTFYKQAKQRFDQDEQFRETSRQAVVALQA 226

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            D    KAW+++C+ SRR+FQ IYD L++T+ ERGESFY   +  +V  L++K LL  D+
Sbjct: 227 GDAKSIKAWQLLCEQSRREFQLIYDCLDITIEERGESFYNPFLPGVVELLQEKDLLVEDN 286

Query: 382 GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G + ++      +D   +P+ + KSDGG+ Y T+DLAA+  R+  + A+ I+YVTD    
Sbjct: 287 GAQCVFLDGFTNKDGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTDAGQA 346

Query: 437 HQVLQAIAEEEKKQGISSSSS------SQTKGT-AKKMNVPVRDRMSVRDYLSDVFTHAV 489
           +   Q     EK   ++  +          KG   KK+     D + ++D L++  T A 
Sbjct: 347 NHFAQFFQVAEKAGILTDPTQVVHVPFGLVKGEDGKKLKTRAGDTIRLKDLLTEAVTRAR 406

Query: 490 Q 490
           Q
Sbjct: 407 Q 407



 Score =  287 bits (734), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 157/356 (44%), Positives = 225/356 (63%), Gaps = 23/356 (6%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +S+   L+D F  A++  FP   D T            KFGDFQCN A+ L K       
Sbjct: 2    VSILTQLNDHFAQALEGQFPS--DVTLPTPLVVPASNPKFGDFQCNIALPLAKQLG---- 55

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             + P  IA  I   V        +L+++ + + +A PGF+N+ L   Y GEQ+  +  N 
Sbjct: 56   -QPPRAIAMEIVDKV--------NLSEICEPLTIAGPGFINIKLLPDYLGEQLIKLQQNQ 106

Query: 1222 VQPPTLNK-KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
                +L K + R++VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ G+DV+RLNHVGDW
Sbjct: 107  QLGVSLVKGEERIVVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVLRLNHVGDW 166

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            GTQFGMLI +L++ +P+ L  +    I DL  FYK++K+RFD+DE F++ + Q VVALQ 
Sbjct: 167  GTQFGMLITYLKEVYPEALVTADALDIGDLVTFYKQAKQRFDQDEQFRETSRQAVVALQA 226

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             D    KAW+++C+ SRR+FQ IYD L++T+ ERGESFY   +  +V  L++K LL  D+
Sbjct: 227  GDAKSIKAWQLLCEQSRREFQLIYDCLDITIEERGESFYNPFLPGVVELLQEKDLLVEDN 286

Query: 1399 GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G + ++      +D   +P+ + KSDGG+ Y T+DLAA+  R+  + A+ I+YVTD
Sbjct: 287  GAQCVFLDGFTNKDGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTD 342


>gi|414077064|ref|YP_006996382.1| arginyl-tRNA synthetase [Anabaena sp. 90]
 gi|9715730|emb|CAC01600.1| putative arginyl-tRNA synthetase [Anabaena circinalis 90]
 gi|413970480|gb|AFW94569.1| arginyl-tRNA synthetase [Anabaena sp. 90]
          Length = 585

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/565 (44%), Positives = 355/565 (62%), Gaps = 32/565 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N A++L K        K P         ++  E+ +   ++ + +  E+A PG
Sbjct: 38   KFGDYQANVALSLSKKLG-----KQP--------RIIAGEIVSKLDVSDICEPPEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            F+N+ L   Y   Q+  I ++  +  PT     + +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85   FINLKLQTSYLEAQLNAIQIDARLGIPTATNPQKQIVDFSSPNIAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 689
            +I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ +PD LT +    I DL  FY+++K
Sbjct: 145  SIARILEFCGHDVLRLNHVGDWGTQFGMLITYLREVYPDALTTANALDIGDLVNFYRKAK 204

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 749
            +RFDED +F++ + Q VV LQ    D   AW+++C+ SR++FQ IYD LNV L ERGESF
Sbjct: 205  QRFDEDPVFQETSRQEVVRLQAGAEDTLHAWKLLCEQSRQEFQIIYDLLNVELIERGESF 264

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L   GLLE   G K ++       +   +P+ + K+DGG+ Y T+DLAA
Sbjct: 265  YNPLLPKVVENLATTGLLESSQGAKCVFLDGFTNREGNPLPLIVQKTDGGYNYATTDLAA 324

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +  RI+E+KA  IVYVTD GQ  HF    + A+KA  + P    +  V FG+VLGED KK
Sbjct: 325  LGYRIQEDKAKRIVYVTDEGQSNHFAQFFQVARKANWI-PEDVELVHVPFGLVLGEDGKK 383

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLS 922
            FKTRSGDTV+L +LLDE + R+   ++++ +  E T TE  +    + V    +KYADLS
Sbjct: 384  FKTRSGDTVRLRDLLDEAINRARADIENRLQEDERTETEEFMQNVAEVVGISAVKYADLS 443

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR   YVFS+DKML  +GNTA YLLYAY RI  I+R   I+  +L +  Q   + L+ +
Sbjct: 444  QNRTSSYVFSYDKMLSLKGNTAPYLLYAYVRIQGISRQGNIDFTNLGINRQ---ILLKED 500

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
             E  LAK LL++++V+  V +DL  + LC+YLY +S  F++FY+NC  ++ +   +    
Sbjct: 501  AELTLAKHLLQLDEVIKEVEQDLLPNRLCDYLYQLSDKFNKFYENCPVLKSEEPAR---- 556

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIR 1067
             T RL+L + TAK +K    +L I+
Sbjct: 557  -TSRLMLCDLTAKTLKLGLSLLGIK 580



 Score =  280 bits (716), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 205/319 (64%), Gaps = 21/319 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N A++L K        K P         ++  E+ +   ++ + +  E+A PG
Sbjct: 38  KFGDYQANVALSLSKKLG-----KQP--------RIIAGEIVSKLDVSDICEPPEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           F+N+ L   Y   Q+  I ++  +  PT     + +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85  FINLKLQTSYLEAQLNAIQIDARLGIPTATNPQKQIVDFSSPNIAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 299
           +I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ +PD LT +    I DL  FY+++K
Sbjct: 145 SIARILEFCGHDVLRLNHVGDWGTQFGMLITYLREVYPDALTTANALDIGDLVNFYRKAK 204

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 359
           +RFDED +F++ + Q VV LQ    D   AW+++C+ SR++FQ IYD LNV L ERGESF
Sbjct: 205 QRFDEDPVFQETSRQEVVRLQAGAEDTLHAWKLLCEQSRQEFQIIYDLLNVELIERGESF 264

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L   GLLE   G K ++       +   +P+ + K+DGG+ Y T+DLAA
Sbjct: 265 YNPLLPKVVENLATTGLLESSQGAKCVFLDGFTNREGNPLPLIVQKTDGGYNYATTDLAA 324

Query: 415 IRQRIEEEKADWIVYVTDH 433
           +  RI+E+KA  IVYVTD 
Sbjct: 325 LGYRIQEDKAKRIVYVTDE 343



 Score =  280 bits (716), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 205/319 (64%), Gaps = 21/319 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N A++L K        K P         ++  E+ +   ++ + +  E+A PG
Sbjct: 38   KFGDYQANVALSLSKKLG-----KQP--------RIIAGEIVSKLDVSDICEPPEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            F+N+ L   Y   Q+  I ++  +  PT     + +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85   FINLKLQTSYLEAQLNAIQIDARLGIPTATNPQKQIVDFSSPNIAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 1316
            +I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ +PD LT +    I DL  FY+++K
Sbjct: 145  SIARILEFCGHDVLRLNHVGDWGTQFGMLITYLREVYPDALTTANALDIGDLVNFYRKAK 204

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 1376
            +RFDED +F++ + Q VV LQ    D   AW+++C+ SR++FQ IYD LNV L ERGESF
Sbjct: 205  QRFDEDPVFQETSRQEVVRLQAGAEDTLHAWKLLCEQSRQEFQIIYDLLNVELIERGESF 264

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L   GLLE   G K ++       +   +P+ + K+DGG+ Y T+DLAA
Sbjct: 265  YNPLLPKVVENLATTGLLESSQGAKCVFLDGFTNREGNPLPLIVQKTDGGYNYATTDLAA 324

Query: 1432 IRQRIEEEKADWIVYVTDH 1450
            +  RI+E+KA  IVYVTD 
Sbjct: 325  LGYRIQEDKAKRIVYVTDE 343


>gi|323457135|gb|EGB13001.1| hypothetical protein AURANDRAFT_18800, partial [Aureococcus
            anophagefferens]
          Length = 584

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/597 (42%), Positives = 353/597 (59%), Gaps = 30/597 (5%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKK--NP 538
            ++ +F  A+  A PE GD +  V          FGD+QCN  M + K  K  G  +  +P
Sbjct: 1    VTRLFAAAIAAAVPEAGDVSPGVMRCGNA---AFGDYQCNAPMGIFKTLKANGVARLPSP 57

Query: 539  FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-P 597
              + ++IA+ V +          V+    VA  GF+N  +         + +  +GV  P
Sbjct: 58   RAVGEAIAAAVPAN--------GVLKSASVAPAGFINAHVEESLLSAHAQRVAASGVAAP 109

Query: 598  PTLNK---KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            P L+      +VLVDFSSPNIAKEMHVGHLRSTIIGDTI R+LE+ GHDV R+NHVGDWG
Sbjct: 110  PPLSAFGGARKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFCGHDVRRVNHVGDWG 169

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLI H+++ +PD+L   P I DL  FYK +KKRFDEDE FK+ + + VVALQ  D 
Sbjct: 170  TQFGMLITHMEEAYPDFLQNPPNITDLTTFYKNAKKRFDEDEQFKEVSRKTVVALQAGDA 229

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
              +  W ++CD+SR++F K+Y RL+V + E GES+Y   +   +  LE  GL+  + G  
Sbjct: 230  RCRAIWSVLCDISRKEFDKVYARLDVKVEEFGESYYNAMIPGAIGLLEDAGLVNAESGAA 289

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
             ++     S P+ I KSDGG+ YD++D+AAI  R+     +W+VYVTDLGQ  HF +  E
Sbjct: 290  CVFLPGH-SFPLIIRKSDGGYGYDSTDMAAIHHRLRTLGVEWVVYVTDLGQAEHFHMCFE 348

Query: 835  CAKKAGILNPNK-TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK 893
             A+ A   + +   R+  VGFGVV GED K+FKTRSG+TV+L +LLD  + R    L D+
Sbjct: 349  AARAAKWDDASAHVRLHHVGFGVVQGEDGKRFKTRSGETVRLVDLLDASVERMEKSLSDR 408

Query: 894  --NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
                   L P E+  A  A+ YG +KY DL  + + +Y FS+DKML   GNTAVYLL+A+
Sbjct: 409  VAEGKCALPPAEVKRAAAAIGYGAVKYFDLHQHPSTNYKFSYDKMLSTSGNTAVYLLFAH 468

Query: 952  TRIASI-ARTAGINSEDLRVAAQSTPVSL-EHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
             R+ASI A+       D + AA    + L +H KE ALA  L +  +V++ V  D     
Sbjct: 469  ARLASIVAKARETRKVDAKAAAAGAALVLTQHAKERALAFELTQFAEVVLSVADDFLPVR 528

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +C+YLY I+T F+EF   C  ++     +       RL+L EAT  VM+KCFD+L I
Sbjct: 529  ICDYLYKIATKFTEFVTECKVLDDPRMAE-------RLVLCEATGVVMRKCFDLLGI 578



 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 154/361 (42%), Positives = 214/361 (59%), Gaps = 21/361 (5%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKK--NP 148
           ++ +F  A+  A PE GD +  V          FGD+QCN  M + K  K  G  +  +P
Sbjct: 1   VTRLFAAAIAAAVPEAGDVSPGVMRCGNA---AFGDYQCNAPMGIFKTLKANGVARLPSP 57

Query: 149 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-P 207
             + ++IA+ V +          V+    VA  GF+N  +         + +  +GV  P
Sbjct: 58  RAVGEAIAAAVPAN--------GVLKSASVAPAGFINAHVEESLLSAHAQRVAASGVAAP 109

Query: 208 PTLNK---KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           P L+      +VLVDFSSPNIAKEMHVGHLRSTIIGDTI R+LE+ GHDV R+NHVGDWG
Sbjct: 110 PPLSAFGGARKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFCGHDVRRVNHVGDWG 169

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLI H+++ +PD+L   P I DL  FYK +KKRFDEDE FK+ + + VVALQ  D 
Sbjct: 170 TQFGMLITHMEEAYPDFLQNPPNITDLTTFYKNAKKRFDEDEQFKEVSRKTVVALQAGDA 229

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
             +  W ++CD+SR++F K+Y RL+V + E GES+Y   +   +  LE  GL+  + G  
Sbjct: 230 RCRAIWSVLCDISRKEFDKVYARLDVKVEEFGESYYNAMIPGAIGLLEDAGLVNAESGAA 289

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
            ++     S P+ I KSDGG+ YD++D+AAI  R+     +W+VYVTD      +H   +
Sbjct: 290 CVFLPGH-SFPLIIRKSDGGYGYDSTDMAAIHHRLRTLGVEWVVYVTDLGQAEHFHMCFE 348

Query: 442 A 442
           A
Sbjct: 349 A 349



 Score =  294 bits (753), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 152/348 (43%), Positives = 210/348 (60%), Gaps = 18/348 (5%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKK--NP 1165
            ++ +F  A+  A PE GD +  V          FGD+QCN  M + K  K  G  +  +P
Sbjct: 1    VTRLFAAAIAAAVPEAGDVSPGVMRCGNA---AFGDYQCNAPMGIFKTLKANGVARLPSP 57

Query: 1166 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-P 1224
              + ++IA+ V +          V+    VA  GF+N  +         + +  +GV  P
Sbjct: 58   RAVGEAIAAAVPAN--------GVLKSASVAPAGFINAHVEESLLSAHAQRVAASGVAAP 109

Query: 1225 PTLNK---KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            P L+      +VLVDFSSPNIAKEMHVGHLRSTIIGDTI R+LE+ GHDV R+NHVGDWG
Sbjct: 110  PPLSAFGGARKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFCGHDVRRVNHVGDWG 169

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLI H+++ +PD+L   P I DL  FYK +KKRFDEDE FK+ + + VVALQ  D 
Sbjct: 170  TQFGMLITHMEEAYPDFLQNPPNITDLTTFYKNAKKRFDEDEQFKEVSRKTVVALQAGDA 229

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
              +  W ++CD+SR++F K+Y RL+V + E GES+Y   +   +  LE  GL+  + G  
Sbjct: 230  RCRAIWSVLCDISRKEFDKVYARLDVKVEEFGESYYNAMIPGAIGLLEDAGLVNAESGAA 289

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++     S P+ I KSDGG+ YD++D+AAI  R+     +W+VYVTD
Sbjct: 290  CVFLPGH-SFPLIIRKSDGGYGYDSTDMAAIHHRLRTLGVEWVVYVTD 336


>gi|405968921|gb|EKC33945.1| Arginyl-tRNA synthetase, cytoplasmic, partial [Crassostrea gigas]
          Length = 436

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/388 (56%), Positives = 285/388 (73%), Gaps = 14/388 (3%)

Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
           +S+   + DVF  A++ AFP++ +    +  ++     KF D+QCN AM + KI K+KG+
Sbjct: 63  ISISSLVEDVFGLAIRKAFPDVDNPPVMIQGSS-----KFADYQCNSAMNIAKILKEKGQ 117

Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             NP DIA  I   +          +   +K+EV  PGF+N+FL++ +  +Q+ +++  G
Sbjct: 118 GANPRDIADKIIQHLPQ--------SDYFEKVEVQGPGFINIFLNKEFVADQVGELLNRG 169

Query: 595 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
           V+PP L  K R LVDFSSPNIAKEMHVGHLRSTIIG++I RLLE++GHDVVR+NH+GDWG
Sbjct: 170 VRPPRLGVKRRALVDFSSPNIAKEMHVGHLRSTIIGESICRLLEWVGHDVVRINHLGDWG 229

Query: 655 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
           TQFGMLIAHL+DKFP+Y   SPPI DLQAFYKESK RFD DE FKK+AY+ VV LQ +D 
Sbjct: 230 TQFGMLIAHLKDKFPNYKVVSPPIGDLQAFYKESKARFDSDEAFKKKAYEAVVQLQSYDK 289

Query: 715 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
           D+  AW++ICDVSR++FQKIYDRL V++ ERGESFYQ+ M+ +V  LE+KG LELDDGRK
Sbjct: 290 DHINAWKLICDVSRKEFQKIYDRLGVSIIERGESFYQELMKDVVKLLEEKGKLELDDGRK 349

Query: 775 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
           IM+     S+PMTIVKSDGGFTYDTSD+AAIR R+ +EKADW++YV D GQG H + +  
Sbjct: 350 IMFVPG-CSVPMTIVKSDGGFTYDTSDMAAIRHRLFDEKADWLIYVVDAGQGSHLQQVFA 408

Query: 835 CAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            A+  G  N   TR++ V FGVVLGED+
Sbjct: 409 AAEDLGWYNKKLTRVEHVAFGVVLGEDK 436



 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/414 (52%), Positives = 289/414 (69%), Gaps = 34/414 (8%)

Query: 34  AAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSD 93
           A Q +N+KLK+++ IL+R+IA E+                ++K N      +S+   + D
Sbjct: 32  ALQSENSKLKYQINILKRSIATEK----------------SRKPN----HMISISSLVED 71

Query: 94  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 153
           VF  A++ AFP++ +    +  ++     KF D+QCN AM + KI K+KG+  NP DIA 
Sbjct: 72  VFGLAIRKAFPDVDNPPVMIQGSS-----KFADYQCNSAMNIAKILKEKGQGANPRDIAD 126

Query: 154 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKK 213
            I   +          +   +K+EV  PGF+N+FL++ +  +Q+ +++  GV+PP L  K
Sbjct: 127 KIIQHLPQ--------SDYFEKVEVQGPGFINIFLNKEFVADQVGELLNRGVRPPRLGVK 178

Query: 214 LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAH 273
            R LVDFSSPNIAKEMHVGHLRSTIIG++I RLLE++GHDVVR+NH+GDWGTQFGMLIAH
Sbjct: 179 RRALVDFSSPNIAKEMHVGHLRSTIIGESICRLLEWVGHDVVRINHLGDWGTQFGMLIAH 238

Query: 274 LQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMI 333
           L+DKFP+Y   SPPI DLQAFYKESK RFD DE FKK+AY+ VV LQ +D D+  AW++I
Sbjct: 239 LKDKFPNYKVVSPPIGDLQAFYKESKARFDSDEAFKKKAYEAVVQLQSYDKDHINAWKLI 298

Query: 334 CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 393
           CDVSR++FQKIYDRL V++ ERGESFYQ+ M+ +V  LE+KG LELDDGRKIM+     S
Sbjct: 299 CDVSRKEFQKIYDRLGVSIIERGESFYQELMKDVVKLLEEKGKLELDDGRKIMFVPG-CS 357

Query: 394 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEE 447
           +PMTIVKSDGGFTYDTSD+AAIR R+ +EKADW++YV D      + Q  A  E
Sbjct: 358 VPMTIVKSDGGFTYDTSDMAAIRHRLFDEKADWLIYVVDAGQGSHLQQVFAAAE 411



 Score =  424 bits (1091), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/348 (58%), Positives = 261/348 (75%), Gaps = 14/348 (4%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +S+   + DVF  A++ AFP++ +    +  ++     KF D+QCN AM + KI K+KG+
Sbjct: 63   ISISSLVEDVFGLAIRKAFPDVDNPPVMIQGSS-----KFADYQCNSAMNIAKILKEKGQ 117

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP DIA  I   +          +   +K+EV  PGF+N+FL++ +  +Q+ +++  G
Sbjct: 118  GANPRDIADKIIQHLPQ--------SDYFEKVEVQGPGFINIFLNKEFVADQVGELLNRG 169

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            V+PP L  K R LVDFSSPNIAKEMHVGHLRSTIIG++I RLLE++GHDVVR+NH+GDWG
Sbjct: 170  VRPPRLGVKRRALVDFSSPNIAKEMHVGHLRSTIIGESICRLLEWVGHDVVRINHLGDWG 229

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAHL+DKFP+Y   SPPI DLQAFYKESK RFD DE FKK+AY+ VV LQ +D 
Sbjct: 230  TQFGMLIAHLKDKFPNYKVVSPPIGDLQAFYKESKARFDSDEAFKKKAYEAVVQLQSYDK 289

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            D+  AW++ICDVSR++FQKIYDRL V++ ERGESFYQ+ M+ +V  LE+KG LELDDGRK
Sbjct: 290  DHINAWKLICDVSRKEFQKIYDRLGVSIIERGESFYQELMKDVVKLLEEKGKLELDDGRK 349

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            IM+     S+PMTIVKSDGGFTYDTSD+AAIR R+ +EKADW++YV D
Sbjct: 350  IMFVPG-CSVPMTIVKSDGGFTYDTSDMAAIRHRLFDEKADWLIYVVD 396


>gi|428300338|ref|YP_007138644.1| arginyl-tRNA synthetase [Calothrix sp. PCC 6303]
 gi|428236882|gb|AFZ02672.1| arginyl-tRNA synthetase [Calothrix sp. PCC 6303]
          Length = 585

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/567 (44%), Positives = 363/567 (64%), Gaps = 36/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N +++L K             + Q   +V T+ +  N  ++ + + +E+A+PG
Sbjct: 38   KFGDYQSNVSLSLAK------------KLGQQPRAVATA-IVENLDVSDICEALEIAEPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   Y   Q+  I  +   GV P T N K R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINIRLKTEYLEAQLNRIQTDPRLGV-PITKNPK-REIVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
            GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +    I DL  FYK+
Sbjct: 143  GDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLREVCPEALTTANALDIGDLVEFYKK 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +K RFD DE F+K A + VV LQ    D  +AW+++C+ SR++FQ IYD L++ + ERGE
Sbjct: 203  AKARFDGDETFQKTAREEVVKLQAGAEDTIRAWKLLCEQSRQEFQIIYDILDINVKERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            SFY  ++  +V  L+K GLLE   G K+++ E     +   +P+ + K+DGG+ Y T+DL
Sbjct: 263  SFYNSYLAAVVADLDKAGLLEESQGAKVVFLEGFTNKEGQPLPLIVQKTDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R+++++A  ++YVTD GQ  HF  + + A+KAG + P+   +  V FG+VLGED 
Sbjct: 323  AALRYRLQQDQAQRLIYVTDSGQAGHFTGVFQVARKAGWI-PDDVEIVHVPFGLVLGEDG 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYAD 920
            KKFKTRSGD V+L +LLDE + RS   L+ + +  E   TE  +S   + V    +KYAD
Sbjct: 382  KKFKTRSGDVVRLRDLLDEAIARSRADLEARLQAEERQETEEFISNVAEVVGISAVKYAD 441

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  DY FSFD+ML  +GNTA Y+LYAY R   IAR   I+  +L     +  + L+
Sbjct: 442  LSQNRTTDYKFSFDRMLSLKGNTAPYMLYAYVRTQGIAREGNIDFLNL---GANVKIFLK 498

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             E EF LAK +L+++ V+  V ++L  + LCEYLY++S  F++FY+NC  ++ +     +
Sbjct: 499  EEAEFTLAKHILQLDQVIAEVEQELLPNRLCEYLYNLSDKFNKFYENCPVLKSE-----E 553

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIR 1067
             V T RL L + TA+ +K    +L IR
Sbjct: 554  PVRTSRLALCDLTARTLKLGLSLLGIR 580



 Score =  277 bits (709), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 147/320 (45%), Positives = 213/320 (66%), Gaps = 25/320 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N +++L K             + Q   +V T+ +  N  ++ + + +E+A+PG
Sbjct: 38  KFGDYQSNVSLSLAK------------KLGQQPRAVATA-IVENLDVSDICEALEIAEPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   Y   Q+  I  +   GV P T N K R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINIRLKTEYLEAQLNRIQTDPRLGV-PITKNPK-REIVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
           GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +    I DL  FYK+
Sbjct: 143 GDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLREVCPEALTTANALDIGDLVEFYKK 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +K RFD DE F+K A + VV LQ    D  +AW+++C+ SR++FQ IYD L++ + ERGE
Sbjct: 203 AKARFDGDETFQKTAREEVVKLQAGAEDTIRAWKLLCEQSRQEFQIIYDILDINVKERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           SFY  ++  +V  L+K GLLE   G K+++ E     +   +P+ + K+DGG+ Y T+DL
Sbjct: 263 SFYNSYLAAVVADLDKAGLLEESQGAKVVFLEGFTNKEGQPLPLIVQKTDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTD 432
           AA+R R+++++A  ++YVTD
Sbjct: 323 AALRYRLQQDQAQRLIYVTD 342



 Score =  277 bits (709), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 147/320 (45%), Positives = 213/320 (66%), Gaps = 25/320 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N +++L K             + Q   +V T+ +  N  ++ + + +E+A+PG
Sbjct: 38   KFGDYQSNVSLSLAK------------KLGQQPRAVATA-IVENLDVSDICEALEIAEPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   Y   Q+  I  +   GV P T N K R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINIRLKTEYLEAQLNRIQTDPRLGV-PITKNPK-REIVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
            GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P+ LT +    I DL  FYK+
Sbjct: 143  GDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLREVCPEALTTANALDIGDLVEFYKK 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +K RFD DE F+K A + VV LQ    D  +AW+++C+ SR++FQ IYD L++ + ERGE
Sbjct: 203  AKARFDGDETFQKTAREEVVKLQAGAEDTIRAWKLLCEQSRQEFQIIYDILDINVKERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY  ++  +V  L+K GLLE   G K+++ E     +   +P+ + K+DGG+ Y T+DL
Sbjct: 263  SFYNSYLAAVVADLDKAGLLEESQGAKVVFLEGFTNKEGQPLPLIVQKTDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            AA+R R+++++A  ++YVTD
Sbjct: 323  AALRYRLQQDQAQRLIYVTD 342


>gi|428314402|ref|YP_007125379.1| arginyl-tRNA synthetase [Microcoleus sp. PCC 7113]
 gi|428256014|gb|AFZ21973.1| arginyl-tRNA synthetase [Microcoleus sp. PCC 7113]
          Length = 595

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/608 (43%), Positives = 379/608 (62%), Gaps = 48/608 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            S+ + L + FTHA+  AF     G     V ++N +    FGD+Q N A++L K  +   
Sbjct: 13   SLIEQLRNKFTHALTTAFGSAVEGIDPIVVPASNPQ----FGDYQSNIALSLSKPLR--- 65

Query: 534  EKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
              + P  IA+ I   +  S +   P+         +A PGF+N+ L   Y   Q+  I  
Sbjct: 66   --QQPRAIAEQIVQHLDVSGICQTPT---------IAGPGFINLRLEPAYLEAQLSAIQT 114

Query: 593  N---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
            +   GV+  ++    R++VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GHDV+RLNH
Sbjct: 115  DPRLGVE--SIKTPQRIIVDFSSPNIAKEMHVGHLRSTIIGDSLARILEFQGHDVLRLNH 172

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            VGDWGTQFGMLIA+L+  +P  LT S    + DL  FY+++K+RFD DE F++ A + VV
Sbjct: 173  VGDWGTQFGMLIAYLRVTYPSALTTSNALDLGDLVTFYRKAKQRFDGDEEFQETARKEVV 232

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ    D ++AW+++C+ SRR+F+ IYD L++ LTERGESFY   +  +V  LE+ GLL
Sbjct: 233  KLQSGAEDSRQAWQLLCEQSRREFEVIYDLLDIHLTERGESFYNPLLPDVVKDLEESGLL 292

Query: 768  ELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              D G + ++ E     +   +P+ + KSDGG+ Y T+DLAAIR RIE+++A  I+YVTD
Sbjct: 293  VEDTGAQCVFLEGFTNKEGQPLPLIVQKSDGGYNYATTDLAAIRYRIEQDRAVRIIYVTD 352

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQ  HF  + + A++AG L  N+ ++  V FG+V GED KK KTRSG+T++L +LLDE 
Sbjct: 353  AGQANHFAQVFQVARRAGWLT-NEVQVVHVPFGLVQGEDGKKLKTRSGETIRLRDLLDEA 411

Query: 883  LRRSL----DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            + R+      +LKD+ R  E T    +   Q +    +KYADLS NRN +Y+FSF+KML 
Sbjct: 412  IARARADLEARLKDEGR--EETEEFKTHVAQIIGLSAVKYADLSQNRNSNYIFSFNKMLS 469

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
             +GNTA YLLYAY RI SI+R   IN +++     +  V L+ E E  L K LL++++VL
Sbjct: 470  LQGNTAPYLLYAYARIQSISRKGNINFDEM---GNNIKVLLQEEAELVLGKHLLQLSEVL 526

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
              + RDL  + LC+YLY++S  F++F++ C  +  +     + V T RL+L   TAK +K
Sbjct: 527  RELERDLLPNRLCQYLYELSQKFNQFFEQCPVLWSE-----EPVRTSRLVLCNLTAKTLK 581

Query: 1059 KCFDILNI 1066
                +L I
Sbjct: 582  LGLSLLGI 589



 Score =  281 bits (719), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 159/360 (44%), Positives = 228/360 (63%), Gaps = 33/360 (9%)

Query: 86  SVRDYLSDVFTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           S+ + L + FTHA+  AF     G     V ++N +    FGD+Q N A++L K  +   
Sbjct: 13  SLIEQLRNKFTHALTTAFGSAVEGIDPIVVPASNPQ----FGDYQSNIALSLSKPLR--- 65

Query: 144 EKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
             + P  IA+ I   +  S +   P+         +A PGF+N+ L   Y   Q+  I  
Sbjct: 66  --QQPRAIAEQIVQHLDVSGICQTPT---------IAGPGFINLRLEPAYLEAQLSAIQT 114

Query: 203 N---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
           +   GV+  ++    R++VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GHDV+RLNH
Sbjct: 115 DPRLGVE--SIKTPQRIIVDFSSPNIAKEMHVGHLRSTIIGDSLARILEFQGHDVLRLNH 172

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 317
           VGDWGTQFGMLIA+L+  +P  LT S    + DL  FY+++K+RFD DE F++ A + VV
Sbjct: 173 VGDWGTQFGMLIAYLRVTYPSALTTSNALDLGDLVTFYRKAKQRFDGDEEFQETARKEVV 232

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 377
            LQ    D ++AW+++C+ SRR+F+ IYD L++ LTERGESFY   +  +V  LE+ GLL
Sbjct: 233 KLQSGAEDSRQAWQLLCEQSRREFEVIYDLLDIHLTERGESFYNPLLPDVVKDLEESGLL 292

Query: 378 ELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D G + ++ E     +   +P+ + KSDGG+ Y T+DLAAIR RIE+++A  I+YVTD
Sbjct: 293 VEDTGAQCVFLEGFTNKEGQPLPLIVQKSDGGYNYATTDLAAIRYRIEQDRAVRIIYVTD 352



 Score =  281 bits (719), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 159/360 (44%), Positives = 228/360 (63%), Gaps = 33/360 (9%)

Query: 1103 SVRDYLSDVFTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            S+ + L + FTHA+  AF     G     V ++N +    FGD+Q N A++L K  +   
Sbjct: 13   SLIEQLRNKFTHALTTAFGSAVEGIDPIVVPASNPQ----FGDYQSNIALSLSKPLR--- 65

Query: 1161 EKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
              + P  IA+ I   +  S +   P+         +A PGF+N+ L   Y   Q+  I  
Sbjct: 66   --QQPRAIAEQIVQHLDVSGICQTPT---------IAGPGFINLRLEPAYLEAQLSAIQT 114

Query: 1220 N---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
            +   GV+  ++    R++VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GHDV+RLNH
Sbjct: 115  DPRLGVE--SIKTPQRIIVDFSSPNIAKEMHVGHLRSTIIGDSLARILEFQGHDVLRLNH 172

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            VGDWGTQFGMLIA+L+  +P  LT S    + DL  FY+++K+RFD DE F++ A + VV
Sbjct: 173  VGDWGTQFGMLIAYLRVTYPSALTTSNALDLGDLVTFYRKAKQRFDGDEEFQETARKEVV 232

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ    D ++AW+++C+ SRR+F+ IYD L++ LTERGESFY   +  +V  LE+ GLL
Sbjct: 233  KLQSGAEDSRQAWQLLCEQSRREFEVIYDLLDIHLTERGESFYNPLLPDVVKDLEESGLL 292

Query: 1395 ELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D G + ++ E     +   +P+ + KSDGG+ Y T+DLAAIR RIE+++A  I+YVTD
Sbjct: 293  VEDTGAQCVFLEGFTNKEGQPLPLIVQKSDGGYNYATTDLAAIRYRIEQDRAVRIIYVTD 352


>gi|334120484|ref|ZP_08494564.1| Arginyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
 gi|333456462|gb|EGK85094.1| Arginyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
          Length = 585

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/606 (42%), Positives = 369/606 (60%), Gaps = 42/606 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            S+   L   F  A   AF E   G      A++N      FGDFQCN AM+L K      
Sbjct: 3    SIAQQLKAKFEKAFTAAFGESYAGADPMLAAASNPN----FGDFQCNAAMSLGKKLG--- 55

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
              K P  IA +I          N  +  + +  E+A PGF+N+ L   Y   QI  I  +
Sbjct: 56   --KPPRAIASTIIE--------NLDITDICETPEIAGPGFINLKLKPAYLEAQISAIAGD 105

Query: 594  ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
               G++P    +   + +DFSSPNIAKEMHVGHLRSTIIGD I+R LE+ GHDV+R+NH+
Sbjct: 106  SRLGIEPAKTPQT--IAIDFSSPNIAKEMHVGHLRSTIIGDAIARTLEFQGHDVLRINHI 163

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            GDWGTQFGMLIA+L++  P+ LT +    + DL AFY+++K+RFD DE FK+ A Q VV 
Sbjct: 164  GDWGTQFGMLIAYLREVHPEALTTADALDLGDLVAFYRQAKQRFDTDETFKETARQEVVK 223

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQ    D ++AW+++CD SRR+FQ IYD L++ LTERGESFY   +  +V  L   GLL 
Sbjct: 224  LQAGAEDTRRAWKLLCDQSRREFQVIYDLLDIKLTERGESFYNPLLPAVVEDLTNLGLLV 283

Query: 769  LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              DG K ++      ++   +P+ + K+DGG+ Y T+DLAA+R RI ++ A  I+YVTD 
Sbjct: 284  ESDGAKCVFVDGFTNKEGEPLPLIVQKTDGGYNYATTDLAAVRYRIHKDNAKRIIYVTDS 343

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
            GQ  HF  +   A+KAG + P    +  + FG+VLGED KK KTRSG+TV+L +LLDE +
Sbjct: 344  GQANHFAQVFAVARKAGWI-PEDVEIVHIPFGLVLGEDGKKLKTRSGETVRLQDLLDEAI 402

Query: 884  RRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
             R+   L+D+ +  E   TE  ++   + V    +KYADLS NR  +Y+FS+DKML  +G
Sbjct: 403  VRTRQDLEDRLKTEERQETEEFIANVSRTVGLSAVKYADLSQNRASNYIFSYDKMLALQG 462

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
            NTA Y+LYAY R+  I R   IN ++L   A+   V L+ + E  LAK LL++N+V+  V
Sbjct: 463  NTAPYMLYAYVRVQGIRRKGEINFDNLDAGAK---VILQSDAELVLAKHLLQLNEVVNAV 519

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
              DL  + +C+YL+++S  F++F++ C  ++ +     + + T RL+L + TA+ +K   
Sbjct: 520  GGDLLPNRICQYLFELSQKFNQFFEQCQVLKAE-----EPLRTSRLILCDLTARTLKLGL 574

Query: 1062 DILNIR 1067
            ++L I+
Sbjct: 575  ELLGIK 580



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 163/375 (43%), Positives = 221/375 (58%), Gaps = 31/375 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           S+   L   F  A   AF E   G      A++N      FGDFQCN AM+L K      
Sbjct: 3   SIAQQLKAKFEKAFTAAFGESYAGADPMLAAASNPN----FGDFQCNAAMSLGKKLG--- 55

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
             K P  IA +I          N  +  + +  E+A PGF+N+ L   Y   QI  I  +
Sbjct: 56  --KPPRAIASTIIE--------NLDITDICETPEIAGPGFINLKLKPAYLEAQISAIAGD 105

Query: 204 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
              G++P    +   + +DFSSPNIAKEMHVGHLRSTIIGD I+R LE+ GHDV+R+NH+
Sbjct: 106 SRLGIEPAKTPQT--IAIDFSSPNIAKEMHVGHLRSTIIGDAIARTLEFQGHDVLRINHI 163

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           GDWGTQFGMLIA+L++  P+ LT +    + DL AFY+++K+RFD DE FK+ A Q VV 
Sbjct: 164 GDWGTQFGMLIAYLREVHPEALTTADALDLGDLVAFYRQAKQRFDTDETFKETARQEVVK 223

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ    D ++AW+++CD SRR+FQ IYD L++ LTERGESFY   +  +V  L   GLL 
Sbjct: 224 LQAGAEDTRRAWKLLCDQSRREFQVIYDLLDIKLTERGESFYNPLLPAVVEDLTNLGLLV 283

Query: 379 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             DG K ++      ++   +P+ + K+DGG+ Y T+DLAA+R RI ++ A  I+YVTD 
Sbjct: 284 ESDGAKCVFVDGFTNKEGEPLPLIVQKTDGGYNYATTDLAAVRYRIHKDNAKRIIYVTDS 343

Query: 434 RSYHQVLQAIAEEEK 448
              +   Q  A   K
Sbjct: 344 GQANHFAQVFAVARK 358



 Score =  283 bits (725), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 160/359 (44%), Positives = 217/359 (60%), Gaps = 31/359 (8%)

Query: 1103 SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            S+   L   F  A   AF E   G      A++N      FGDFQCN AM+L K      
Sbjct: 3    SIAQQLKAKFEKAFTAAFGESYAGADPMLAAASNPN----FGDFQCNAAMSLGKKLG--- 55

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
              K P  IA +I          N  +  + +  E+A PGF+N+ L   Y   QI  I  +
Sbjct: 56   --KPPRAIASTIIE--------NLDITDICETPEIAGPGFINLKLKPAYLEAQISAIAGD 105

Query: 1221 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
               G++P    +   + +DFSSPNIAKEMHVGHLRSTIIGD I+R LE+ GHDV+R+NH+
Sbjct: 106  SRLGIEPAKTPQT--IAIDFSSPNIAKEMHVGHLRSTIIGDAIARTLEFQGHDVLRINHI 163

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            GDWGTQFGMLIA+L++  P+ LT +    + DL AFY+++K+RFD DE FK+ A Q VV 
Sbjct: 164  GDWGTQFGMLIAYLREVHPEALTTADALDLGDLVAFYRQAKQRFDTDETFKETARQEVVK 223

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQ    D ++AW+++CD SRR+FQ IYD L++ LTERGESFY   +  +V  L   GLL 
Sbjct: 224  LQAGAEDTRRAWKLLCDQSRREFQVIYDLLDIKLTERGESFYNPLLPAVVEDLTNLGLLV 283

Query: 1396 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              DG K ++      ++   +P+ + K+DGG+ Y T+DLAA+R RI ++ A  I+YVTD
Sbjct: 284  ESDGAKCVFVDGFTNKEGEPLPLIVQKTDGGYNYATTDLAAVRYRIHKDNAKRIIYVTD 342


>gi|409993960|ref|ZP_11277084.1| arginyl-tRNA ligase [Arthrospira platensis str. Paraca]
 gi|409935176|gb|EKN76716.1| arginyl-tRNA ligase [Arthrospira platensis str. Paraca]
          Length = 585

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/596 (43%), Positives = 366/596 (61%), Gaps = 42/596 (7%)

Query: 485  FTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIA 542
            F  A+  AF E   G     V S+N K    FGD+QCN AM+L K  K      NP  IA
Sbjct: 12   FETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVAMSLTKKLK-----SNPRQIA 62

Query: 543  QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPT 599
             +I   +  +   +P         E+A PGF+N+ L   Y   Q+   + +   G+ P  
Sbjct: 63   GTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEYLETQLNAKLTDPRLGIAPNR 114

Query: 600  LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
              +K  V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGM
Sbjct: 115  DPQK--VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVLRLNHVGDWGTQFGM 172

Query: 660  LIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            LI++LQ+K+P  LT +    I DL  FY+++KKRFDEDE FK+ + + VV LQ    D +
Sbjct: 173  LISYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEEFKEASREQVVRLQSGSEDSR 232

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 777
            +AWE++CD SRR+FQ+IYDRL++ LTERGESFY   + ++V  LE  GLL  D G K ++
Sbjct: 233  RAWELLCDQSRREFQQIYDRLDIKLTERGESFYNPMLAEVVADLEASGLLVEDQGAKCVF 292

Query: 778  GE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E A  ++YVTD GQ  HF  +
Sbjct: 293  LEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTEGATRLIYVTDAGQANHFAQV 352

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
             + A++ G + P+   +  V FG+V GED KK KTRSG+TV+L +LLDE ++R+ + L+ 
Sbjct: 353  WQVARRVGWI-PDGVDVVHVPFGLVKGEDGKKLKTRSGETVRLRDLLDEAVKRAQEDLET 411

Query: 893  KNRHT--ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            + +      +P  +    + V    +KYADLS NR  DY+FSFDKML  +GNTA Y+LYA
Sbjct: 412  RLQQEGRAESPEFVHHVAEVVGIDAVKYADLSQNRTSDYIFSFDKMLSLQGNTAPYMLYA 471

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            Y RI  I+R   I+ E +        + L+   E  LAK LL++++V+  V ++L  + L
Sbjct: 472  YVRIQGISRKGSIDFEQV---GDRASIHLQDPSELTLAKHLLQLHEVIDAVAQELLPNRL 528

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            C+YL+++S  F++FYD C  ++ D     +   + RL L   TA+ ++    +L I
Sbjct: 529  CQYLFELSQKFNQFYDRCPVLKAD-----ECDRSSRLALCHLTAETLRLGLSLLGI 579



 Score =  296 bits (759), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 167/350 (47%), Positives = 222/350 (63%), Gaps = 31/350 (8%)

Query: 95  FTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIA 152
           F  A+  AF E   G     V S+N K    FGD+QCN AM+L K  K      NP  IA
Sbjct: 12  FETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVAMSLTKKLK-----SNPRQIA 62

Query: 153 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPT 209
            +I   +  +   +P         E+A PGF+N+ L   Y   Q+   + +   G+ P  
Sbjct: 63  GTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEYLETQLNAKLTDPRLGIAPNR 114

Query: 210 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
             +K  V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGM
Sbjct: 115 DPQK--VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVLRLNHVGDWGTQFGM 172

Query: 270 LIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           LI++LQ+K+P  LT +    I DL  FY+++KKRFDEDE FK+ + + VV LQ    D +
Sbjct: 173 LISYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEEFKEASREQVVRLQSGSEDSR 232

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 387
           +AWE++CD SRR+FQ+IYDRL++ LTERGESFY   + ++V  LE  GLL  D G K ++
Sbjct: 233 RAWELLCDQSRREFQQIYDRLDIKLTERGESFYNPMLAEVVADLEASGLLVEDQGAKCVF 292

Query: 388 GE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E A  ++YVTD
Sbjct: 293 LEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTEGATRLIYVTD 342



 Score =  296 bits (759), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 167/350 (47%), Positives = 222/350 (63%), Gaps = 31/350 (8%)

Query: 1112 FTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIA 1169
            F  A+  AF E   G     V S+N K    FGD+QCN AM+L K  K      NP  IA
Sbjct: 12   FETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVAMSLTKKLK-----SNPRQIA 62

Query: 1170 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPT 1226
             +I   +  +   +P         E+A PGF+N+ L   Y   Q+   + +   G+ P  
Sbjct: 63   GTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEYLETQLNAKLTDPRLGIAPNR 114

Query: 1227 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
              +K  V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGM
Sbjct: 115  DPQK--VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVLRLNHVGDWGTQFGM 172

Query: 1287 LIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            LI++LQ+K+P  LT +    I DL  FY+++KKRFDEDE FK+ + + VV LQ    D +
Sbjct: 173  LISYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEEFKEASREQVVRLQSGSEDSR 232

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 1404
            +AWE++CD SRR+FQ+IYDRL++ LTERGESFY   + ++V  LE  GLL  D G K ++
Sbjct: 233  RAWELLCDQSRREFQQIYDRLDIKLTERGESFYNPMLAEVVADLEASGLLVEDQGAKCVF 292

Query: 1405 GE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E A  ++YVTD
Sbjct: 293  LEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTEGATRLIYVTD 342


>gi|209523094|ref|ZP_03271650.1| arginyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|423066408|ref|ZP_17055198.1| arginyl-tRNA synthetase [Arthrospira platensis C1]
 gi|209496245|gb|EDZ96544.1| arginyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|406712080|gb|EKD07271.1| arginyl-tRNA synthetase [Arthrospira platensis C1]
          Length = 600

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/616 (42%), Positives = 370/616 (60%), Gaps = 47/616 (7%)

Query: 470  PVRDRM-----SVRDYLSDVFTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDA 522
            P+R+R      S+   +   F  A+  AF E   G     V S+N K    FGD+QCN A
Sbjct: 7    PLRNRQPKIMSSLIQQMRSRFETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVA 62

Query: 523  MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 582
            M+L K  K      NP  IA +I   +  +   +P         E+A PGF+N+ L   Y
Sbjct: 63   MSLTKRLK-----SNPRQIASTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEY 109

Query: 583  AGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 639
               Q+   + +   G+ P        V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+
Sbjct: 110  LETQLNAKLTDPRLGIAPN--GNPQNVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEF 167

Query: 640  LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEI 697
             GH V+RLNHVGDWGTQFGMLI +LQ+K+P  LT +    I DL  FY+++KKRFDEDE 
Sbjct: 168  EGHQVLRLNHVGDWGTQFGMLITYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEE 227

Query: 698  FKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQL 757
            FK+ + + VV LQ    D ++AWE++CD SRR+FQ+IYDRL++ LTERGESFY   + ++
Sbjct: 228  FKEASREQVVRLQSGAEDSRRAWELLCDQSRREFQQIYDRLDIKLTERGESFYNPMLAEV 287

Query: 758  VPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 812
            V  LE  GLL  D G K ++ E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E
Sbjct: 288  VADLEASGLLVEDQGAKCVFLEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTE 347

Query: 813  KADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDT 872
             A  ++YVTD GQ  HF  + + A++ G + P+   +  V FG+V GED KK KTRSG+T
Sbjct: 348  GATRLIYVTDAGQANHFAQVWQVARRVGWI-PDGVDVVHVPFGLVKGEDGKKLKTRSGET 406

Query: 873  VKLSELLDEGLRRSLDKLKDKNRHT--ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYV 930
            V+L +LLDE ++R+ + L+ + +      +P  +    + V    +KYADLS NR  DY+
Sbjct: 407  VRLRDLLDEAVKRAQEDLETRLQQEGRAESPEFVHHVAEVVGIDAVKYADLSQNRTSDYI 466

Query: 931  FSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKT 990
            FSFDKML  +GNTA Y+LYAY RI  I+R   I+ E +        + L+   E  LAK 
Sbjct: 467  FSFDKMLSLQGNTAPYMLYAYVRIQGISRKGSIDFEQV---GDRASIHLQDPSELTLAKH 523

Query: 991  LLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLA 1050
            LL++++V+  V ++L  + LC+YL+++S  F++FYD C  ++ D     +     RL L 
Sbjct: 524  LLQLHEVIDTVAQELLPNRLCQYLFELSQKFNQFYDRCPVLKAD-----ECDRASRLALC 578

Query: 1051 EATAKVMKKCFDILNI 1066
              TA+ ++    +L I
Sbjct: 579  HLTAETLRLGLSLLGI 594



 Score =  296 bits (758), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 170/370 (45%), Positives = 227/370 (61%), Gaps = 36/370 (9%)

Query: 80  PVRDRM-----SVRDYLSDVFTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDA 132
           P+R+R      S+   +   F  A+  AF E   G     V S+N K    FGD+QCN A
Sbjct: 7   PLRNRQPKIMSSLIQQMRSRFETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVA 62

Query: 133 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 192
           M+L K  K      NP  IA +I   +  +   +P         E+A PGF+N+ L   Y
Sbjct: 63  MSLTKRLK-----SNPRQIASTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEY 109

Query: 193 AGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 249
              Q+   + +   G+ P        V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+
Sbjct: 110 LETQLNAKLTDPRLGIAPN--GNPQNVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEF 167

Query: 250 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEI 307
            GH V+RLNHVGDWGTQFGMLI +LQ+K+P  LT +    I DL  FY+++KKRFDEDE 
Sbjct: 168 EGHQVLRLNHVGDWGTQFGMLITYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEE 227

Query: 308 FKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQL 367
           FK+ + + VV LQ    D ++AWE++CD SRR+FQ+IYDRL++ LTERGESFY   + ++
Sbjct: 228 FKEASREQVVRLQSGAEDSRRAWELLCDQSRREFQQIYDRLDIKLTERGESFYNPMLAEV 287

Query: 368 VPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
           V  LE  GLL  D G K ++ E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E
Sbjct: 288 VADLEASGLLVEDQGAKCVFLEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTE 347

Query: 423 KADWIVYVTD 432
            A  ++YVTD
Sbjct: 348 GATRLIYVTD 357



 Score =  296 bits (758), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 170/370 (45%), Positives = 227/370 (61%), Gaps = 36/370 (9%)

Query: 1097 PVRDRM-----SVRDYLSDVFTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDA 1149
            P+R+R      S+   +   F  A+  AF E   G     V S+N K    FGD+QCN A
Sbjct: 7    PLRNRQPKIMSSLIQQMRSRFETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVA 62

Query: 1150 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 1209
            M+L K  K      NP  IA +I   +  +   +P         E+A PGF+N+ L   Y
Sbjct: 63   MSLTKRLK-----SNPRQIASTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEY 109

Query: 1210 AGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 1266
               Q+   + +   G+ P        V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+
Sbjct: 110  LETQLNAKLTDPRLGIAPN--GNPQNVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEF 167

Query: 1267 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEI 1324
             GH V+RLNHVGDWGTQFGMLI +LQ+K+P  LT +    I DL  FY+++KKRFDEDE 
Sbjct: 168  EGHQVLRLNHVGDWGTQFGMLITYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEE 227

Query: 1325 FKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQL 1384
            FK+ + + VV LQ    D ++AWE++CD SRR+FQ+IYDRL++ LTERGESFY   + ++
Sbjct: 228  FKEASREQVVRLQSGAEDSRRAWELLCDQSRREFQQIYDRLDIKLTERGESFYNPMLAEV 287

Query: 1385 VPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 1439
            V  LE  GLL  D G K ++ E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E
Sbjct: 288  VADLEASGLLVEDQGAKCVFLEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTE 347

Query: 1440 KADWIVYVTD 1449
             A  ++YVTD
Sbjct: 348  GATRLIYVTD 357


>gi|46445865|ref|YP_007230.1| arginyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25]
 gi|81627687|sp|Q6MEP4.1|SYR_PARUW RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|46399506|emb|CAF22955.1| probable arginyl-tRNA synthetase [Candidatus Protochlamydia
            amoebophila UWE25]
          Length = 584

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/602 (42%), Positives = 377/602 (62%), Gaps = 43/602 (7%)

Query: 481  LSDVFTHAVQVAFPELGD-----KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            L+++F  A   AFP+L       +     ST EK    FG +Q N AM L K+ K     
Sbjct: 8    LANLFQQATANAFPDLSVLDPNFQPEITPSTQEK----FGHYQFNSAMKLAKLLK----- 58

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
            KNP  +A++I + +T  L   P L+K    IE+A PGF+N+  S  +  + + DI++   
Sbjct: 59   KNPRQVAEAIVNQLTDSL---PPLSK----IEIAGPGFINMTFSTDFLSKNL-DILLRDA 110

Query: 596  Q--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
                P   K  ++++DFSSPN+AKEMHVGHLRST+IGD+++RL E+LGH V+RLNH+GDW
Sbjct: 111  HFGIPFPEKPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHVIRLNHLGDW 170

Query: 654  GTQFGMLIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            GT FGMLIA+++++ P+ L+  +   +  L ++Y+ SKK+FDE+  FK+RA   VVALQ+
Sbjct: 171  GTAFGMLIAYMKEEAPNVLSGEQKTDLTHLVSWYRSSKKKFDEEPEFKRRAQLEVVALQQ 230

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             +   ++AW+MIC++S++ +Q+IY  L+V + +RGESFY   +  +V  LEKKGL+++ D
Sbjct: 231  GEQKAREAWQMICEISQKAYQEIYQLLDVKIIDRGESFYNPFLPNIVSDLEKKGLVKISD 290

Query: 772  GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G K ++ E     +  ++P+ I KSDGG+ YDT+D+AAI  RI  EK D ++Y+TD GQ 
Sbjct: 291  GAKCIFLEGFQNREGENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKGDRLIYITDAGQA 350

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             HF+++ + A+KA  L+  + R+D V FG+VLG D KKF+TRSG+T KL +LL   +  +
Sbjct: 351  THFQMIFKAAEKAKYLDTTQIRVDHVPFGLVLGTDGKKFRTRSGETEKLIDLLRTAINCA 410

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               L +KN   E+  +E     +++  G IKYADLS NR  DY FS+D+ML   GNTA +
Sbjct: 411  DKILSEKN--PEMEESERRHLAKSLGIGAIKYADLSCNRVGDYTFSYDRMLRFEGNTAAF 468

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            L+YAY RIA I R    N   L    ++T ++LEH  E  L   +LR ++ L L+  DL 
Sbjct: 469  LMYAYVRIAGIKRRLKAN---LPAVLENTHINLEHSTEIELGLHILRFHETLNLMANDLL 525

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             + L +YLY ++  F+ F+ +C       EG  +     RLLL EATAKV+K+   IL +
Sbjct: 526  PNRLTDYLYTLAEKFNAFFRDC-----RVEGTPQ--QNTRLLLCEATAKVLKQGLTILGL 578

Query: 1067 RT 1068
             T
Sbjct: 579  TT 580



 Score =  291 bits (745), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 173/459 (37%), Positives = 268/459 (58%), Gaps = 49/459 (10%)

Query: 91  LSDVFTHAVQVAFPELGD-----KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           L+++F  A   AFP+L       +     ST EK    FG +Q N AM L K+ K     
Sbjct: 8   LANLFQQATANAFPDLSVLDPNFQPEITPSTQEK----FGHYQFNSAMKLAKLLK----- 58

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
           KNP  +A++I + +T  L   P L+K    IE+A PGF+N+  S  +  + + DI++   
Sbjct: 59  KNPRQVAEAIVNQLTDSL---PPLSK----IEIAGPGFINMTFSTDFLSKNL-DILLRDA 110

Query: 206 Q--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
               P   K  ++++DFSSPN+AKEMHVGHLRST+IGD+++RL E+LGH V+RLNH+GDW
Sbjct: 111 HFGIPFPEKPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHVIRLNHLGDW 170

Query: 264 GTQFGMLIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           GT FGMLIA+++++ P+ L+  +   +  L ++Y+ SKK+FDE+  FK+RA   VVALQ+
Sbjct: 171 GTAFGMLIAYMKEEAPNVLSGEQKTDLTHLVSWYRSSKKKFDEEPEFKRRAQLEVVALQQ 230

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            +   ++AW+MIC++S++ +Q+IY  L+V + +RGESFY   +  +V  LEKKGL+++ D
Sbjct: 231 GEQKAREAWQMICEISQKAYQEIYQLLDVKIIDRGESFYNPFLPNIVSDLEKKGLVKISD 290

Query: 382 GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HR 434
           G K ++ E     +  ++P+ I KSDGG+ YDT+D+AAI  RI  EK D ++Y+TD    
Sbjct: 291 GAKCIFLEGFQNREGENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKGDRLIYITDAGQA 350

Query: 435 SYHQVLQAIAEEEKKQGISSSSSSQTK-----GTAKKMNVPVRDRMSVRDYLSDVFTHAV 489
           ++ Q++   AE+ K    +             GT  K     R R    + L D+   A+
Sbjct: 351 THFQMIFKAAEKAKYLDTTQIRVDHVPFGLVLGTDGK---KFRTRSGETEKLIDLLRTAI 407

Query: 490 QVAFPELGDKTASVASTNEKYVH--------KFGDFQCN 520
             A   L +K   +  +  +++         K+ D  CN
Sbjct: 408 NCADKILSEKNPEMEESERRHLAKSLGIGAIKYADLSCN 446



 Score =  289 bits (739), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 154/356 (43%), Positives = 233/356 (65%), Gaps = 31/356 (8%)

Query: 1108 LSDVFTHAVQVAFPELGD-----KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            L+++F  A   AFP+L       +     ST EK    FG +Q N AM L K+ K     
Sbjct: 8    LANLFQQATANAFPDLSVLDPNFQPEITPSTQEK----FGHYQFNSAMKLAKLLK----- 58

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
            KNP  +A++I + +T  L   P L+K    IE+A PGF+N+  S  +  + + DI++   
Sbjct: 59   KNPRQVAEAIVNQLTDSL---PPLSK----IEIAGPGFINMTFSTDFLSKNL-DILLRDA 110

Query: 1223 Q--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
                P   K  ++++DFSSPN+AKEMHVGHLRST+IGD+++RL E+LGH V+RLNH+GDW
Sbjct: 111  HFGIPFPEKPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHVIRLNHLGDW 170

Query: 1281 GTQFGMLIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            GT FGMLIA+++++ P+ L+  +   +  L ++Y+ SKK+FDE+  FK+RA   VVALQ+
Sbjct: 171  GTAFGMLIAYMKEEAPNVLSGEQKTDLTHLVSWYRSSKKKFDEEPEFKRRAQLEVVALQQ 230

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +   ++AW+MIC++S++ +Q+IY  L+V + +RGESFY   +  +V  LEKKGL+++ D
Sbjct: 231  GEQKAREAWQMICEISQKAYQEIYQLLDVKIIDRGESFYNPFLPNIVSDLEKKGLVKISD 290

Query: 1399 GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G K ++ E     +  ++P+ I KSDGG+ YDT+D+AAI  RI  EK D ++Y+TD
Sbjct: 291  GAKCIFLEGFQNREGENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKGDRLIYITD 346


>gi|434395004|ref|YP_007129951.1| arginyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
 gi|428266845|gb|AFZ32791.1| arginyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
          Length = 585

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/589 (43%), Positives = 373/589 (63%), Gaps = 52/589 (8%)

Query: 485  FTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 539
            FT A+ VAF   G+  A      VA++N K    FGD+Q N A++L +      + K P 
Sbjct: 12   FTQALIVAF---GNDFAEIDPIIVAASNPK----FGDYQSNVALSLSR------QLKQP- 57

Query: 540  DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 599
              A++IA  +  +L     +  + +   +A PGF+N+ L   Y   Q++ I  +    P 
Sbjct: 58   --ARAIAEQIVEKL----DVTDICEPPSIAGPGFINLLLKTEYIEAQLRSIQTD----PR 107

Query: 600  LNKKL-----RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            L   L     RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+RLNHVGDWG
Sbjct: 108  LGVALAKTPKRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARVLEFRGHDVLRLNHVGDWG 167

Query: 655  TQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            TQFGMLIA+L++ +PD LT +    + DL  FY+++K+RFDEDE F++ A Q VV LQ  
Sbjct: 168  TQFGMLIAYLREAYPDALTTANALELGDLVTFYRKAKQRFDEDETFRETARQEVVKLQAG 227

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
              D +KAWE++C+ SRR+FQ IY+ L++ L ERGESFY   +  +V  L+++GLL  D G
Sbjct: 228  VEDTQKAWELLCEQSRREFQVIYNLLDIHLIERGESFYNPLLPAVVEDLDRQGLLVEDAG 287

Query: 773  RKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
             K ++ E     +   +P+ + KSDGG+ Y T+DLAA+R RI++++A+ ++YVTD GQ  
Sbjct: 288  AKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAALRYRIKQDQAERLIYVTDAGQAN 347

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF  + + A++AG + P    +  V FG+VLGED KK KTRSG+T++L +LLDE + RS 
Sbjct: 348  HFAQVFQVARRAGWI-PENVEIVHVPFGLVLGEDGKKLKTRSGETIRLRDLLDEAIARSR 406

Query: 888  DKLKDKNRHTELTPTELSEAQ--QAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
              L+ + +    T TE  +A+  Q V    +KYADLS NR  +Y+FS+DKML  +GNTA 
Sbjct: 407  ADLESRLQAEGRTETEEFKAKVAQTVGISAVKYADLSQNRTSNYIFSYDKMLALQGNTAP 466

Query: 946  YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
            Y+LYAY RI  I+R   I+ E L   A    + L    EF LAK LL++++ +  V +DL
Sbjct: 467  YMLYAYVRIQGISRKGQIDFEQLGSEAN---IFLHEPTEFTLAKHLLQLSETISDVEQDL 523

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATA 1054
              + LC+YL+++S  F++FYD C  ++ +     + + T RLL+ + TA
Sbjct: 524  MPNRLCQYLFELSQKFNQFYDQCPVLQAE-----EPIRTSRLLMCDLTA 567



 Score =  287 bits (735), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 162/355 (45%), Positives = 230/355 (64%), Gaps = 41/355 (11%)

Query: 95  FTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 149
           FT A+ VAF   G+  A      VA++N K    FGD+Q N A++L +      + K P 
Sbjct: 12  FTQALIVAF---GNDFAEIDPIIVAASNPK----FGDYQSNVALSLSR------QLKQP- 57

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 209
             A++IA  +  +L     +  + +   +A PGF+N+ L   Y   Q++ I  +    P 
Sbjct: 58  --ARAIAEQIVEKL----DVTDICEPPSIAGPGFINLLLKTEYIEAQLRSIQTD----PR 107

Query: 210 LNKKL-----RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           L   L     RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+RLNHVGDWG
Sbjct: 108 LGVALAKTPKRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARVLEFRGHDVLRLNHVGDWG 167

Query: 265 TQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           TQFGMLIA+L++ +PD LT +    + DL  FY+++K+RFDEDE F++ A Q VV LQ  
Sbjct: 168 TQFGMLIAYLREAYPDALTTANALELGDLVTFYRKAKQRFDEDETFRETARQEVVKLQAG 227

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
             D +KAWE++C+ SRR+FQ IY+ L++ L ERGESFY   +  +V  L+++GLL  D G
Sbjct: 228 VEDTQKAWELLCEQSRREFQVIYNLLDIHLIERGESFYNPLLPAVVEDLDRQGLLVEDAG 287

Query: 383 RKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            K ++ E     +   +P+ + KSDGG+ Y T+DLAA+R RI++++A+ ++YVTD
Sbjct: 288 AKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAALRYRIKQDQAERLIYVTD 342



 Score =  287 bits (735), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 162/355 (45%), Positives = 230/355 (64%), Gaps = 41/355 (11%)

Query: 1112 FTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 1166
            FT A+ VAF   G+  A      VA++N K    FGD+Q N A++L +      + K P 
Sbjct: 12   FTQALIVAF---GNDFAEIDPIIVAASNPK----FGDYQSNVALSLSR------QLKQP- 57

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT 1226
              A++IA  +  +L     +  + +   +A PGF+N+ L   Y   Q++ I  +    P 
Sbjct: 58   --ARAIAEQIVEKL----DVTDICEPPSIAGPGFINLLLKTEYIEAQLRSIQTD----PR 107

Query: 1227 LNKKL-----RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            L   L     RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GHDV+RLNHVGDWG
Sbjct: 108  LGVALAKTPKRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARVLEFRGHDVLRLNHVGDWG 167

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            TQFGMLIA+L++ +PD LT +    + DL  FY+++K+RFDEDE F++ A Q VV LQ  
Sbjct: 168  TQFGMLIAYLREAYPDALTTANALELGDLVTFYRKAKQRFDEDETFRETARQEVVKLQAG 227

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
              D +KAWE++C+ SRR+FQ IY+ L++ L ERGESFY   +  +V  L+++GLL  D G
Sbjct: 228  VEDTQKAWELLCEQSRREFQVIYNLLDIHLIERGESFYNPLLPAVVEDLDRQGLLVEDAG 287

Query: 1400 RKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             K ++ E     +   +P+ + KSDGG+ Y T+DLAA+R RI++++A+ ++YVTD
Sbjct: 288  AKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAALRYRIKQDQAERLIYVTD 342


>gi|291571146|dbj|BAI93418.1| arginyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 585

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/596 (43%), Positives = 366/596 (61%), Gaps = 42/596 (7%)

Query: 485  FTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIA 542
            F  A+  AF E   G     V S+N K    FGD+QCN AM+L K  K      NP  IA
Sbjct: 12   FETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVAMSLTKKLK-----SNPRQIA 62

Query: 543  QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPT 599
             +I   +  +   +P         E+A PGF+N+ L   Y   Q+   + +   G+ P  
Sbjct: 63   GTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEYLETQLNAKLTDPRLGIAPNR 114

Query: 600  LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
              +K  V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGM
Sbjct: 115  DPQK--VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVLRLNHVGDWGTQFGM 172

Query: 660  LIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            LI++LQ+K+P  LT +    I DL  FY+++KKRFDEDE FK+ + + VV LQ    D +
Sbjct: 173  LISYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEEFKEASREQVVRLQSGAEDSR 232

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 777
            +AWE++C+ SRR+FQ+IYDRL++ LTERGESFY   + ++V  LE  GLL  D G K ++
Sbjct: 233  RAWELLCEQSRREFQQIYDRLDIKLTERGESFYNPMLAEVVADLEASGLLVEDQGAKCVF 292

Query: 778  GE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E A  ++YVTD GQ  HF  +
Sbjct: 293  LEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTEGATRLIYVTDAGQANHFAQV 352

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
             + A++ G + P+   +  V FG+V GED KK KTRSG+TV+L +LLDE ++R+ + L+ 
Sbjct: 353  WQVARRVGWI-PDGVDVVHVPFGLVKGEDGKKLKTRSGETVRLRDLLDEAVKRAQEDLET 411

Query: 893  KNRHT--ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            + +      +P  +    + V    +KYADLS NR  DY+FSFDKML  +GNTA Y+LYA
Sbjct: 412  RLQQEGRAESPEFVHHVAEVVGIDAVKYADLSQNRTSDYIFSFDKMLSLQGNTAPYMLYA 471

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            Y RI  I+R   I+ E +        + L+   E  LAK LL++++V+  V ++L  + L
Sbjct: 472  YVRIQGISRKGSIDFEQV---GDRASIHLQDPSELTLAKHLLQLHEVIDAVAQELLPNRL 528

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            C+YL+++S  F++FYD C  ++ D     +   + RL L   TA+ ++    +L I
Sbjct: 529  CQYLFELSQKFNQFYDRCPVLKAD-----ECDRSSRLALCHLTAETLRLGLSLLGI 579



 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 166/350 (47%), Positives = 222/350 (63%), Gaps = 31/350 (8%)

Query: 95  FTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIA 152
           F  A+  AF E   G     V S+N K    FGD+QCN AM+L K  K      NP  IA
Sbjct: 12  FETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVAMSLTKKLK-----SNPRQIA 62

Query: 153 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPT 209
            +I   +  +   +P         E+A PGF+N+ L   Y   Q+   + +   G+ P  
Sbjct: 63  GTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEYLETQLNAKLTDPRLGIAPNR 114

Query: 210 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
             +K  V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGM
Sbjct: 115 DPQK--VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVLRLNHVGDWGTQFGM 172

Query: 270 LIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           LI++LQ+K+P  LT +    I DL  FY+++KKRFDEDE FK+ + + VV LQ    D +
Sbjct: 173 LISYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEEFKEASREQVVRLQSGAEDSR 232

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 387
           +AWE++C+ SRR+FQ+IYDRL++ LTERGESFY   + ++V  LE  GLL  D G K ++
Sbjct: 233 RAWELLCEQSRREFQQIYDRLDIKLTERGESFYNPMLAEVVADLEASGLLVEDQGAKCVF 292

Query: 388 GE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E A  ++YVTD
Sbjct: 293 LEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTEGATRLIYVTD 342



 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 166/350 (47%), Positives = 222/350 (63%), Gaps = 31/350 (8%)

Query: 1112 FTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIA 1169
            F  A+  AF E   G     V S+N K    FGD+QCN AM+L K  K      NP  IA
Sbjct: 12   FETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVAMSLTKKLK-----SNPRQIA 62

Query: 1170 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPT 1226
             +I   +  +   +P         E+A PGF+N+ L   Y   Q+   + +   G+ P  
Sbjct: 63   GTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEYLETQLNAKLTDPRLGIAPNR 114

Query: 1227 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
              +K  V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGM
Sbjct: 115  DPQK--VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVLRLNHVGDWGTQFGM 172

Query: 1287 LIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            LI++LQ+K+P  LT +    I DL  FY+++KKRFDEDE FK+ + + VV LQ    D +
Sbjct: 173  LISYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEEFKEASREQVVRLQSGAEDSR 232

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 1404
            +AWE++C+ SRR+FQ+IYDRL++ LTERGESFY   + ++V  LE  GLL  D G K ++
Sbjct: 233  RAWELLCEQSRREFQQIYDRLDIKLTERGESFYNPMLAEVVADLEASGLLVEDQGAKCVF 292

Query: 1405 GE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E A  ++YVTD
Sbjct: 293  LEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTEGATRLIYVTD 342


>gi|338734098|ref|YP_004672571.1| arginyl-tRNA synthetase [Simkania negevensis Z]
 gi|336483481|emb|CCB90080.1| arginyl-tRNA synthetase [Simkania negevensis Z]
          Length = 584

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/599 (42%), Positives = 362/599 (60%), Gaps = 37/599 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L +  T  ++  FP+    +   A        KFG +QCN AM L KI K      NP +
Sbjct: 8    LQNQATKILKQCFPDEDISSCLPADITPSTQDKFGHYQCNSAMKLGKILK-----TNPRN 62

Query: 541  IAQSIASVVTSELATNPSLAK-VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQ 596
            +A  I       L     L   +ID  E+A PGF+N+ L+  +  +++  +I +   GV 
Sbjct: 63   VALQI-------LEKWEGLKDGMIDSFEIAGPGFINITLTDTFLSKELTAVIADERLGV- 114

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
             P L +K +++V+FSSPN+AKE+HVGHLRST+IGD ++RL E+LGHDV+RLNH+GDWGTQ
Sbjct: 115  -PPLKEKKKIIVEFSSPNVAKELHVGHLRSTVIGDALARLFEFLGHDVLRLNHIGDWGTQ 173

Query: 657  FGMLIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            FGMLI +L+++    L+  +   +  L  +Y+ESKK FD D  FKKRA   VV LQ  +P
Sbjct: 174  FGMLITYLKEQHAGVLSNDEKADLPSLMNWYRESKKCFDADPEFKKRAQLQVVELQSGEP 233

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
                AWE IC++SR  FQ+IYD L+V L ERGESFY   + Q++   E KGL+E+ DG K
Sbjct: 234  AALAAWEKICEISRLGFQEIYDFLDVKLVERGESFYNPKLSQVIKDYEAKGLIEVSDGAK 293

Query: 775  IMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
             ++ E     D   +PM + KSDGG+ Y T+D AA+  R+ EEKAD I+YV D GQ +HF
Sbjct: 294  CVFLEGFTAKDDKPLPMILQKSDGGYNYATTDAAAVHHRVTEEKADRIIYVVDAGQQLHF 353

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            +++ + A KAG  +P K +++ V FGVVLG D KKFKTRSG+T KL +LL + +  +   
Sbjct: 354  QMVFQGAAKAGYYDPAKVQLEHVAFGVVLGPDGKKFKTRSGETEKLIDLLQKAVDYAKKI 413

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            L++  R  + TP E+ E    +    +KYADLS +R  DYVFS+D+ML   GNTA +LLY
Sbjct: 414  LQE--RLEDATPKEIEELAHTLGVDAVKYADLSCHRVKDYVFSYDRMLKFEGNTAAFLLY 471

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            AY RI  I R     S+D+     + P+ L+H  E AL   L R  + L L+ RDL  + 
Sbjct: 472  AYVRIQGIKRKV---SKDVEAVVLTAPIVLKHPTEVALGLHLRRFGETLELMDRDLLPNR 528

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            L +YLY+++  F  F+ +C  +E   E         RL+L E TA+++K   +IL ++T
Sbjct: 529  LSDYLYELAEKFHAFFRDCR-VEGVPE------ENSRLVLCELTARILKTGLNILGLKT 580



 Score =  286 bits (732), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 160/369 (43%), Positives = 222/369 (60%), Gaps = 28/369 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L +  T  ++  FP+    +   A        KFG +QCN AM L KI K      NP +
Sbjct: 8   LQNQATKILKQCFPDEDISSCLPADITPSTQDKFGHYQCNSAMKLGKILK-----TNPRN 62

Query: 151 IAQSIASVVTSELATNPSLAK-VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQ 206
           +A  I       L     L   +ID  E+A PGF+N+ L+  +  +++  +I +   GV 
Sbjct: 63  VALQI-------LEKWEGLKDGMIDSFEIAGPGFINITLTDTFLSKELTAVIADERLGV- 114

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
            P L +K +++V+FSSPN+AKE+HVGHLRST+IGD ++RL E+LGHDV+RLNH+GDWGTQ
Sbjct: 115 -PPLKEKKKIIVEFSSPNVAKELHVGHLRSTVIGDALARLFEFLGHDVLRLNHIGDWGTQ 173

Query: 267 FGMLIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           FGMLI +L+++    L+  +   +  L  +Y+ESKK FD D  FKKRA   VV LQ  +P
Sbjct: 174 FGMLITYLKEQHAGVLSNDEKADLPSLMNWYRESKKCFDADPEFKKRAQLQVVELQSGEP 233

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
               AWE IC++SR  FQ+IYD L+V L ERGESFY   + Q++   E KGL+E+ DG K
Sbjct: 234 AALAAWEKICEISRLGFQEIYDFLDVKLVERGESFYNPKLSQVIKDYEAKGLIEVSDGAK 293

Query: 385 IMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSY 436
            ++ E     D   +PM + KSDGG+ Y T+D AA+  R+ EEKAD I+YV D      +
Sbjct: 294 CVFLEGFTAKDDKPLPMILQKSDGGYNYATTDAAAVHHRVTEEKADRIIYVVDAGQQLHF 353

Query: 437 HQVLQAIAE 445
             V Q  A+
Sbjct: 354 QMVFQGAAK 362



 Score =  286 bits (731), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 157/353 (44%), Positives = 217/353 (61%), Gaps = 25/353 (7%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L +  T  ++  FP+    +   A        KFG +QCN AM L KI K      NP +
Sbjct: 8    LQNQATKILKQCFPDEDISSCLPADITPSTQDKFGHYQCNSAMKLGKILK-----TNPRN 62

Query: 1168 IAQSIASVVTSELATNPSLAK-VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQ 1223
            +A  I       L     L   +ID  E+A PGF+N+ L+  +  +++  +I +   GV 
Sbjct: 63   VALQI-------LEKWEGLKDGMIDSFEIAGPGFINITLTDTFLSKELTAVIADERLGV- 114

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
             P L +K +++V+FSSPN+AKE+HVGHLRST+IGD ++RL E+LGHDV+RLNH+GDWGTQ
Sbjct: 115  -PPLKEKKKIIVEFSSPNVAKELHVGHLRSTVIGDALARLFEFLGHDVLRLNHIGDWGTQ 173

Query: 1284 FGMLIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            FGMLI +L+++    L+  +   +  L  +Y+ESKK FD D  FKKRA   VV LQ  +P
Sbjct: 174  FGMLITYLKEQHAGVLSNDEKADLPSLMNWYRESKKCFDADPEFKKRAQLQVVELQSGEP 233

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
                AWE IC++SR  FQ+IYD L+V L ERGESFY   + Q++   E KGL+E+ DG K
Sbjct: 234  AALAAWEKICEISRLGFQEIYDFLDVKLVERGESFYNPKLSQVIKDYEAKGLIEVSDGAK 293

Query: 1402 IMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++ E     D   +PM + KSDGG+ Y T+D AA+  R+ EEKAD I+YV D
Sbjct: 294  CVFLEGFTAKDDKPLPMILQKSDGGYNYATTDAAAVHHRVTEEKADRIIYVVD 346


>gi|218440177|ref|YP_002378506.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226701373|sp|B7KCT7.1|SYR_CYAP7 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|218172905|gb|ACK71638.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 585

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/610 (45%), Positives = 383/610 (62%), Gaps = 50/610 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPE-LGD-KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            +S+ + L   F  A++ AF +   D +   V +TN K    FGD+Q N A++L K  K  
Sbjct: 2    ISLIEQLKTRFIQALKTAFDQDFSDLEGLVVPATNPK----FGDYQSNVALSLAKPLK-- 55

Query: 533  GEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQ 586
               + P  IA+ I   +  S+L   P         ++A  GF+N+     FL  + A  Q
Sbjct: 56   ---QPPRTIAEQIIKALDISDLCEPP---------QIAGAGFINLTLKANFLENLLAKIQ 103

Query: 587  IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
             KD  + GV+  +     RV+VDFSSPNIAKEMHVGHLRSTI+GD I+R+LE+ GHDV+R
Sbjct: 104  -KDSRL-GVEKAS--PSARVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLR 159

Query: 647  LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQ 704
            LNHVGDWGTQFGMLIA+L++ +P+ LT +    + DL AFYK++K RFDEDE FK+ A +
Sbjct: 160  LNHVGDWGTQFGMLIAYLREVYPEALTTADALNLGDLVAFYKKAKVRFDEDETFKETARK 219

Query: 705  CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 764
             VV LQ    D + AW+++CD SRR+FQ IY+ L+V LTERGESFY   + ++V  L+++
Sbjct: 220  EVVKLQAGAKDTRHAWQLLCDQSRREFQVIYNILDVNLTERGESFYNPLLPEIVGQLDEE 279

Query: 765  GLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
            GLL  D G K ++ E     +   +P+ + KSD G+ Y T+DLAA++ RI+E+KA+ I+Y
Sbjct: 280  GLLTEDQGAKCVFLEGFTNKEGNPLPLIVQKSDEGYNYATTDLAALKYRIKEDKAERIIY 339

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
            VTD GQ  HF  + + AKKAGI+ P    +  V FGVV GED KK KTRSGDT+KL +L+
Sbjct: 340  VTDAGQANHFAQVFQVAKKAGII-PENIEVVHVAFGVVKGEDGKKLKTRSGDTIKLKDLI 398

Query: 880  DEGL---RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKM 936
            DE +   RR L+K   ++   E +   ++   Q V    IKYADLS NR  DYVFS+DKM
Sbjct: 399  DEAVAYARRDLEKRLAEDDRKE-SKDFINHVSQVVGISAIKYADLSQNRISDYVFSYDKM 457

Query: 937  LDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMND 996
            L  +GNTA Y+LYAY RI SI+R   I+ E L   A+   V L  E E AL K LL+  +
Sbjct: 458  LALQGNTAPYMLYAYARIQSISREGNIDFEKLDEKAK---VILSEETELALGKYLLQFTE 514

Query: 997  VLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
            V+  V  +L  + LCEYLY++S  F++FY+NC  ++  +E  IK   T RL+L + TA+ 
Sbjct: 515  VIEDVEINLLPNRLCEYLYELSKKFNKFYENCPVLK--SEDPIK---TSRLILCDLTART 569

Query: 1057 MKKCFDILNI 1066
            +K    +L I
Sbjct: 570  LKLGLSLLGI 579



 Score =  279 bits (714), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 171/383 (44%), Positives = 241/383 (62%), Gaps = 38/383 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPE-LGD-KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           +S+ + L   F  A++ AF +   D +   V +TN K    FGD+Q N A++L K  K  
Sbjct: 2   ISLIEQLKTRFIQALKTAFDQDFSDLEGLVVPATNPK----FGDYQSNVALSLAKPLK-- 55

Query: 143 GEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQ 196
              + P  IA+ I   +  S+L   P         ++A  GF+N+     FL  + A  Q
Sbjct: 56  ---QPPRTIAEQIIKALDISDLCEPP---------QIAGAGFINLTLKANFLENLLAKIQ 103

Query: 197 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
            KD  + GV+  +     RV+VDFSSPNIAKEMHVGHLRSTI+GD I+R+LE+ GHDV+R
Sbjct: 104 -KDSRL-GVEKAS--PSARVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLR 159

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQ 314
           LNHVGDWGTQFGMLIA+L++ +P+ LT +    + DL AFYK++K RFDEDE FK+ A +
Sbjct: 160 LNHVGDWGTQFGMLIAYLREVYPEALTTADALNLGDLVAFYKKAKVRFDEDETFKETARK 219

Query: 315 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 374
            VV LQ    D + AW+++CD SRR+FQ IY+ L+V LTERGESFY   + ++V  L+++
Sbjct: 220 EVVKLQAGAKDTRHAWQLLCDQSRREFQVIYNILDVNLTERGESFYNPLLPEIVGQLDEE 279

Query: 375 GLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 429
           GLL  D G K ++ E     +   +P+ + KSD G+ Y T+DLAA++ RI+E+KA+ I+Y
Sbjct: 280 GLLTEDQGAKCVFLEGFTNKEGNPLPLIVQKSDEGYNYATTDLAALKYRIKEDKAERIIY 339

Query: 430 VTDHRSYHQVLQAIAEEEKKQGI 452
           VTD    +   Q + +  KK GI
Sbjct: 340 VTDAGQANHFAQ-VFQVAKKAGI 361



 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 169/375 (45%), Positives = 237/375 (63%), Gaps = 40/375 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPE-LGD-KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            +S+ + L   F  A++ AF +   D +   V +TN K    FGD+Q N A++L K  K  
Sbjct: 2    ISLIEQLKTRFIQALKTAFDQDFSDLEGLVVPATNPK----FGDYQSNVALSLAKPLK-- 55

Query: 1160 GEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQ 1213
               + P  IA+ I   +  S+L   P         ++A  GF+N+     FL  + A  Q
Sbjct: 56   ---QPPRTIAEQIIKALDISDLCEPP---------QIAGAGFINLTLKANFLENLLAKIQ 103

Query: 1214 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
             KD  + GV+  +     RV+VDFSSPNIAKEMHVGHLRSTI+GD I+R+LE+ GHDV+R
Sbjct: 104  -KDSRL-GVEKAS--PSARVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLR 159

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQ 1331
            LNHVGDWGTQFGMLIA+L++ +P+ LT +    + DL AFYK++K RFDEDE FK+ A +
Sbjct: 160  LNHVGDWGTQFGMLIAYLREVYPEALTTADALNLGDLVAFYKKAKVRFDEDETFKETARK 219

Query: 1332 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 1391
             VV LQ    D + AW+++CD SRR+FQ IY+ L+V LTERGESFY   + ++V  L+++
Sbjct: 220  EVVKLQAGAKDTRHAWQLLCDQSRREFQVIYNILDVNLTERGESFYNPLLPEIVGQLDEE 279

Query: 1392 GLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 1446
            GLL  D G K ++ E     +   +P+ + KSD G+ Y T+DLAA++ RI+E+KA+ I+Y
Sbjct: 280  GLLTEDQGAKCVFLEGFTNKEGNPLPLIVQKSDEGYNYATTDLAALKYRIKEDKAERIIY 339

Query: 1447 VTD---HRSYHQVLQ 1458
            VTD      + QV Q
Sbjct: 340  VTDAGQANHFAQVFQ 354


>gi|284929097|ref|YP_003421619.1| arginyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809556|gb|ADB95261.1| arginyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 584

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/596 (42%), Positives = 378/596 (63%), Gaps = 43/596 (7%)

Query: 485  FTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQS 544
            F +A+  +F E  +      S  +   H   D+Q N A +L K  K K          Q 
Sbjct: 12   FNYALIKSFGEEFNNVDPQVSIAKDTRH--ADYQVNIAFSLAKKLKKK---------PQE 60

Query: 545  IASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLN 601
            I+ ++   L  +P    V +   +  PGF+N+ + + Y  +QIK +  +   G+     +
Sbjct: 61   ISQIIIGNLPVSP----VYETPSIGGPGFINLRIKKGYLEDQIKLLCEDERLGILKTHNS 116

Query: 602  KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 661
            +K  ++VDFSSPNIAKEMHVGHLRSTIIGD++SR+LE++GHD++RLNHVGDWGTQFGMLI
Sbjct: 117  QK--IIVDFSSPNIAKEMHVGHLRSTIIGDSLSRILEFIGHDILRLNHVGDWGTQFGMLI 174

Query: 662  AHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 719
            ++L++ FP+ L ++    I DL +FY+++KKRFDED  F++ + + VV LQ  + +Y+KA
Sbjct: 175  SYLKEVFPNALYEANVLQIEDLVSFYRKAKKRFDEDIQFQEISREAVVKLQLGNEEYRKA 234

Query: 720  WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 779
            W+++C+ SRR+FQ IYD L + LTERGESFY   +E++V  L+K+ +LE+ DG K ++ E
Sbjct: 235  WKLLCEQSRREFQVIYDILQIELTERGESFYNPFLEEIVNDLDKQKILEISDGAKCVFLE 294

Query: 780  -----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
                     +P+ + KSDGG+ Y T+DLAA++ RI  +KA  I+YVTD GQ  HF  + +
Sbjct: 295  GFINKSGNPLPLIVQKSDGGYNYATTDLAALKYRINIDKAKHIIYVTDAGQSNHFAQVFQ 354

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL---RRSL-DKL 890
             A++AG L   +T +  + FG+V GED KK KTRSG+T++L +LLD+ +   R++L ++L
Sbjct: 355  IAQRAGFLR-EETSVSHIPFGLVKGEDGKKLKTRSGETIRLKDLLDKSIYQARKNLENRL 413

Query: 891  KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            K +NR  E +   ++     V  G +KYADLS NRN DY+FS+DKML  +GNTA Y+LYA
Sbjct: 414  KTENR--EESQEFINNVANVVGIGSVKYADLSQNRNSDYIFSYDKMLSLQGNTAPYMLYA 471

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            Y RI SI R   IN      A ++T V L+ E E  LAK LL++N+V+ ++   L  + L
Sbjct: 472  YARIKSILREEKINY----AALENTQVILQDEAEIDLAKYLLQLNEVIEIIENTLLPNRL 527

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            CEYLY++S  F+ FY+NC  ++      + +    RL+L + TA+ ++    +L I
Sbjct: 528  CEYLYELSKRFNRFYENCPVLK-----SVDSTKFSRLVLCDLTARTLELGLSLLGI 578



 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/360 (42%), Positives = 229/360 (63%), Gaps = 30/360 (8%)

Query: 95  FTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQS 154
           F +A+  +F E  +      S  +   H   D+Q N A +L K  K K          Q 
Sbjct: 12  FNYALIKSFGEEFNNVDPQVSIAKDTRH--ADYQVNIAFSLAKKLKKK---------PQE 60

Query: 155 IASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLN 211
           I+ ++   L  +P    V +   +  PGF+N+ + + Y  +QIK +  +   G+     +
Sbjct: 61  ISQIIIGNLPVSP----VYETPSIGGPGFINLRIKKGYLEDQIKLLCEDERLGILKTHNS 116

Query: 212 KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 271
           +K  ++VDFSSPNIAKEMHVGHLRSTIIGD++SR+LE++GHD++RLNHVGDWGTQFGMLI
Sbjct: 117 QK--IIVDFSSPNIAKEMHVGHLRSTIIGDSLSRILEFIGHDILRLNHVGDWGTQFGMLI 174

Query: 272 AHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 329
           ++L++ FP+ L ++    I DL +FY+++KKRFDED  F++ + + VV LQ  + +Y+KA
Sbjct: 175 SYLKEVFPNALYEANVLQIEDLVSFYRKAKKRFDEDIQFQEISREAVVKLQLGNEEYRKA 234

Query: 330 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 389
           W+++C+ SRR+FQ IYD L + LTERGESFY   +E++V  L+K+ +LE+ DG K ++ E
Sbjct: 235 WKLLCEQSRREFQVIYDILQIELTERGESFYNPFLEEIVNDLDKQKILEISDGAKCVFLE 294

Query: 390 -----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
                    +P+ + KSDGG+ Y T+DLAA++ RI  +KA  I+YVTD      + QV Q
Sbjct: 295 GFINKSGNPLPLIVQKSDGGYNYATTDLAALKYRINIDKAKHIIYVTDAGQSNHFAQVFQ 354



 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/360 (42%), Positives = 229/360 (63%), Gaps = 30/360 (8%)

Query: 1112 FTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQS 1171
            F +A+  +F E  +      S  +   H   D+Q N A +L K  K K          Q 
Sbjct: 12   FNYALIKSFGEEFNNVDPQVSIAKDTRH--ADYQVNIAFSLAKKLKKK---------PQE 60

Query: 1172 IASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLN 1228
            I+ ++   L  +P    V +   +  PGF+N+ + + Y  +QIK +  +   G+     +
Sbjct: 61   ISQIIIGNLPVSP----VYETPSIGGPGFINLRIKKGYLEDQIKLLCEDERLGILKTHNS 116

Query: 1229 KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 1288
            +K  ++VDFSSPNIAKEMHVGHLRSTIIGD++SR+LE++GHD++RLNHVGDWGTQFGMLI
Sbjct: 117  QK--IIVDFSSPNIAKEMHVGHLRSTIIGDSLSRILEFIGHDILRLNHVGDWGTQFGMLI 174

Query: 1289 AHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 1346
            ++L++ FP+ L ++    I DL +FY+++KKRFDED  F++ + + VV LQ  + +Y+KA
Sbjct: 175  SYLKEVFPNALYEANVLQIEDLVSFYRKAKKRFDEDIQFQEISREAVVKLQLGNEEYRKA 234

Query: 1347 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE 1406
            W+++C+ SRR+FQ IYD L + LTERGESFY   +E++V  L+K+ +LE+ DG K ++ E
Sbjct: 235  WKLLCEQSRREFQVIYDILQIELTERGESFYNPFLEEIVNDLDKQKILEISDGAKCVFLE 294

Query: 1407 -----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
                     +P+ + KSDGG+ Y T+DLAA++ RI  +KA  I+YVTD      + QV Q
Sbjct: 295  GFINKSGNPLPLIVQKSDGGYNYATTDLAALKYRINIDKAKHIIYVTDAGQSNHFAQVFQ 354


>gi|332709098|ref|ZP_08429067.1| arginyl-tRNA synthetase [Moorea producens 3L]
 gi|332352149|gb|EGJ31720.1| arginyl-tRNA synthetase [Moorea producens 3L]
          Length = 585

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/610 (42%), Positives = 375/610 (61%), Gaps = 48/610 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            S+ + L   FT A+  AF     G     V ++N K    FGD+Q N A+AL K  K   
Sbjct: 3    SIVEQLRLQFTQALTAAFGSDVAGVDPMMVPASNPK----FGDYQSNVALALSKRLK--- 55

Query: 534  EKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
              + P  IA+S+   +  +E+  +P+         +A PGF+N+ L   Y  E++++I  
Sbjct: 56   --QPPRAIAESLLQYIDVAEICQSPT---------IAGPGFINLSLKPAYLEERLREIHT 104

Query: 593  NGVQPPTLNKKL-----RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
            +    P L   +     +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ G +V+RL
Sbjct: 105  D----PRLGVAVAPAPRQVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGQNVLRL 160

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQC 705
            NHVGDWGTQFGMLI +L++ +P  LT +    + DL   Y+++K+RFD DE F++ +   
Sbjct: 161  NHVGDWGTQFGMLITYLREAYPSALTTADALDLGDLVTLYRQAKQRFDADEEFREASRLE 220

Query: 706  VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 765
            VV LQ    D ++AW+++CD SRR+FQ IYD L++ LTERGESFY   + ++V YL+K G
Sbjct: 221  VVKLQSGAADSRRAWQLLCDQSRREFQIIYDLLDIQLTERGESFYNTLLPEVVDYLDKSG 280

Query: 766  LLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            LL  D G K ++ E     D   +P+ + KSDGG+ Y T+DLAA+R R E+++A  I+YV
Sbjct: 281  LLVEDSGAKCVFLEGFTNKDGEPLPLIVQKSDGGYNYATTDLAALRYRTEQDQAQRIIYV 340

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
            TD GQ  HF  + + A++ GIL P    +  V FG+VLGED KK KTRSG+TV+L +LLD
Sbjct: 341  TDSGQANHFAQVFQVARRTGIL-PENVEVVHVPFGLVLGEDGKKLKTRSGETVRLRDLLD 399

Query: 881  EGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            E + RS   L+ + +      TE       + V    +KYADLS NR  +Y+FSFDKML 
Sbjct: 400  EAIARSGADLESRLKQEGREETEEFKEHVAKVVGMSAVKYADLSQNRTSNYIFSFDKMLA 459

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
             +GNTA Y+LYAY RI  I+R   I+ E L   A+   + L+ + E  L K LL++++VL
Sbjct: 460  LQGNTAPYMLYAYVRIQGISRKGEIDFEQLGTDAK---ILLQEDAELVLGKKLLQLSEVL 516

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
              V ++L  + LC+YL+++S  F++FYD C  ++ +   +     T RLLL + TA+ +K
Sbjct: 517  GEVEKELMPNRLCQYLFELSQKFNQFYDQCPVLKAEEPKR-----TSRLLLCDLTARTLK 571

Query: 1059 KCFDILNIRT 1068
                +L I+ 
Sbjct: 572  LGLYLLGIQV 581



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 162/374 (43%), Positives = 232/374 (62%), Gaps = 40/374 (10%)

Query: 86  SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           S+ + L   FT A+  AF     G     V ++N K    FGD+Q N A+AL K  K   
Sbjct: 3   SIVEQLRLQFTQALTAAFGSDVAGVDPMMVPASNPK----FGDYQSNVALALSKRLK--- 55

Query: 144 EKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
             + P  IA+S+   +  +E+  +P+         +A PGF+N+ L   Y  E++++I  
Sbjct: 56  --QPPRAIAESLLQYIDVAEICQSPT---------IAGPGFINLSLKPAYLEERLREIHT 104

Query: 203 NGVQPPTLNKKL-----RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 257
           +    P L   +     +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ G +V+RL
Sbjct: 105 D----PRLGVAVAPAPRQVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGQNVLRL 160

Query: 258 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQC 315
           NHVGDWGTQFGMLI +L++ +P  LT +    + DL   Y+++K+RFD DE F++ +   
Sbjct: 161 NHVGDWGTQFGMLITYLREAYPSALTTADALDLGDLVTLYRQAKQRFDADEEFREASRLE 220

Query: 316 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 375
           VV LQ    D ++AW+++CD SRR+FQ IYD L++ LTERGESFY   + ++V YL+K G
Sbjct: 221 VVKLQSGAADSRRAWQLLCDQSRREFQIIYDLLDIQLTERGESFYNTLLPEVVDYLDKSG 280

Query: 376 LLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           LL  D G K ++ E     D   +P+ + KSDGG+ Y T+DLAA+R R E+++A  I+YV
Sbjct: 281 LLVEDSGAKCVFLEGFTNKDGEPLPLIVQKSDGGYNYATTDLAALRYRTEQDQAQRIIYV 340

Query: 431 TDH---RSYHQVLQ 441
           TD      + QV Q
Sbjct: 341 TDSGQANHFAQVFQ 354



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 162/374 (43%), Positives = 232/374 (62%), Gaps = 40/374 (10%)

Query: 1103 SVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            S+ + L   FT A+  AF     G     V ++N K    FGD+Q N A+AL K  K   
Sbjct: 3    SIVEQLRLQFTQALTAAFGSDVAGVDPMMVPASNPK----FGDYQSNVALALSKRLK--- 55

Query: 1161 EKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
              + P  IA+S+   +  +E+  +P+         +A PGF+N+ L   Y  E++++I  
Sbjct: 56   --QPPRAIAESLLQYIDVAEICQSPT---------IAGPGFINLSLKPAYLEERLREIHT 104

Query: 1220 NGVQPPTLNKKL-----RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
            +    P L   +     +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ G +V+RL
Sbjct: 105  D----PRLGVAVAPAPRQVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGQNVLRL 160

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQC 1332
            NHVGDWGTQFGMLI +L++ +P  LT +    + DL   Y+++K+RFD DE F++ +   
Sbjct: 161  NHVGDWGTQFGMLITYLREAYPSALTTADALDLGDLVTLYRQAKQRFDADEEFREASRLE 220

Query: 1333 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 1392
            VV LQ    D ++AW+++CD SRR+FQ IYD L++ LTERGESFY   + ++V YL+K G
Sbjct: 221  VVKLQSGAADSRRAWQLLCDQSRREFQIIYDLLDIQLTERGESFYNTLLPEVVDYLDKSG 280

Query: 1393 LLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            LL  D G K ++ E     D   +P+ + KSDGG+ Y T+DLAA+R R E+++A  I+YV
Sbjct: 281  LLVEDSGAKCVFLEGFTNKDGEPLPLIVQKSDGGYNYATTDLAALRYRTEQDQAQRIIYV 340

Query: 1448 TDH---RSYHQVLQ 1458
            TD      + QV Q
Sbjct: 341  TDSGQANHFAQVFQ 354


>gi|397569838|gb|EJK47003.1| hypothetical protein THAOC_34315 [Thalassiosira oceanica]
          Length = 830

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/596 (41%), Positives = 363/596 (60%), Gaps = 25/596 (4%)

Query: 482  SDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDI 541
            S VF   + VAFP        + S   K + + GD+QCN AM L +  K  G   +    
Sbjct: 245  SAVFAAGILVAFPSAASLGVELKSFKCKDM-RHGDYQCNAAMPLYQKLKAAGALPDGVST 303

Query: 542  AQSIASVVTSEL-ATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV--QPP 598
             Q +AS +   + A NP    V++ ++V  PGF+   +   Y  + + DI+ N    +P 
Sbjct: 304  PQQVASAIIDAIGADNP----VMEDLKVNGPGFIMSRIKASYLLDGVNDILKNAAPTKPV 359

Query: 599  TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFG 658
               +   V+VDFSSPNIAKEMHVGHLRSTIIG+++ R+LEY+G DV R+NHVGDWGTQFG
Sbjct: 360  LTAQSGNVVVDFSSPNIAKEMHVGHLRSTIIGESVCRILEYVGADVSRVNHVGDWGTQFG 419

Query: 659  MLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 718
            MLI +L++++PD+    P I DL AFYK +K RFDE   FKK +   VV LQ  D + +K
Sbjct: 420  MLIQYLKEEYPDFTDDVPNITDLTAFYKNAKMRFDESPEFKKVSQLNVVKLQAGDEECRK 479

Query: 719  AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD-GRKIMW 777
             W+++CDVSR++F+K+Y+RL++ +TE GESFY   +  ++   +K G+L  ++ G K +W
Sbjct: 480  IWQVLCDVSRKEFEKVYNRLDIKVTECGESFYNDKIAPVIGEFDKAGILTSEEGGAKCVW 539

Query: 778  GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAK 837
              D    P+ + KSDGG+ YD++D+AAI+ RI++  A   VY+TD  QG HF+++ + A+
Sbjct: 540  -VDGYPQPLMLQKSDGGYGYDSTDMAAIKYRIDKLGATQCVYITDFTQGDHFQMVFKAAR 598

Query: 838  KAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NR 895
            K G +  +  R+D +GFG V GED K+FKTRSGDTV+L +LLDE + R    L ++    
Sbjct: 599  KIGWVEGDSHRLDHIGFGTVQGEDGKRFKTRSGDTVRLVDLLDEAVSRMEASLNERIAEG 658

Query: 896  HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIA 955
               +T  ++ E   A+ YG +KY DL  N   +Y+FS+D+MLD +GNTA+YLLYA+ R+ 
Sbjct: 659  KAGITKDQVHETACAMGYGAVKYFDLRRNPTSNYIFSYDRMLDTKGNTAIYLLYAHARLE 718

Query: 956  SIARTA----GINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
            SI   A    G+N ++L    Q+  + L H+ E  LA  L    D +    +DL  +H+C
Sbjct: 719  SIISRAEADHGVNVDELIKGGQA--IVLGHKSERNLALHLEIFADCIEETLKDLYPYHIC 776

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            +++Y++S A S+F   C  +  D           R+LL  ATA  M++CF +L IR
Sbjct: 777  DFVYNLSIAASDFVTQCKVLGTDE-------MQSRVLLCRATAITMRQCFQLLGIR 825



 Score =  283 bits (724), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 217/345 (62%), Gaps = 10/345 (2%)

Query: 92  SDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDI 151
           S VF   + VAFP        + S   K + + GD+QCN AM L +  K  G   +    
Sbjct: 245 SAVFAAGILVAFPSAASLGVELKSFKCKDM-RHGDYQCNAAMPLYQKLKAAGALPDGVST 303

Query: 152 AQSIASVVTSEL-ATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV--QPP 208
            Q +AS +   + A NP    V++ ++V  PGF+   +   Y  + + DI+ N    +P 
Sbjct: 304 PQQVASAIIDAIGADNP----VMEDLKVNGPGFIMSRIKASYLLDGVNDILKNAAPTKPV 359

Query: 209 TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFG 268
              +   V+VDFSSPNIAKEMHVGHLRSTIIG+++ R+LEY+G DV R+NHVGDWGTQFG
Sbjct: 360 LTAQSGNVVVDFSSPNIAKEMHVGHLRSTIIGESVCRILEYVGADVSRVNHVGDWGTQFG 419

Query: 269 MLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 328
           MLI +L++++PD+    P I DL AFYK +K RFDE   FKK +   VV LQ  D + +K
Sbjct: 420 MLIQYLKEEYPDFTDDVPNITDLTAFYKNAKMRFDESPEFKKVSQLNVVKLQAGDEECRK 479

Query: 329 AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD-GRKIMW 387
            W+++CDVSR++F+K+Y+RL++ +TE GESFY   +  ++   +K G+L  ++ G K +W
Sbjct: 480 IWQVLCDVSRKEFEKVYNRLDIKVTECGESFYNDKIAPVIGEFDKAGILTSEEGGAKCVW 539

Query: 388 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D    P+ + KSDGG+ YD++D+AAI+ RI++  A   VY+TD
Sbjct: 540 -VDGYPQPLMLQKSDGGYGYDSTDMAAIKYRIDKLGATQCVYITD 583



 Score =  283 bits (724), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 217/345 (62%), Gaps = 10/345 (2%)

Query: 1109 SDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDI 1168
            S VF   + VAFP        + S   K + + GD+QCN AM L +  K  G   +    
Sbjct: 245  SAVFAAGILVAFPSAASLGVELKSFKCKDM-RHGDYQCNAAMPLYQKLKAAGALPDGVST 303

Query: 1169 AQSIASVVTSEL-ATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV--QPP 1225
             Q +AS +   + A NP    V++ ++V  PGF+   +   Y  + + DI+ N    +P 
Sbjct: 304  PQQVASAIIDAIGADNP----VMEDLKVNGPGFIMSRIKASYLLDGVNDILKNAAPTKPV 359

Query: 1226 TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFG 1285
               +   V+VDFSSPNIAKEMHVGHLRSTIIG+++ R+LEY+G DV R+NHVGDWGTQFG
Sbjct: 360  LTAQSGNVVVDFSSPNIAKEMHVGHLRSTIIGESVCRILEYVGADVSRVNHVGDWGTQFG 419

Query: 1286 MLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 1345
            MLI +L++++PD+    P I DL AFYK +K RFDE   FKK +   VV LQ  D + +K
Sbjct: 420  MLIQYLKEEYPDFTDDVPNITDLTAFYKNAKMRFDESPEFKKVSQLNVVKLQAGDEECRK 479

Query: 1346 AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD-GRKIMW 1404
             W+++CDVSR++F+K+Y+RL++ +TE GESFY   +  ++   +K G+L  ++ G K +W
Sbjct: 480  IWQVLCDVSRKEFEKVYNRLDIKVTECGESFYNDKIAPVIGEFDKAGILTSEEGGAKCVW 539

Query: 1405 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D    P+ + KSDGG+ YD++D+AAI+ RI++  A   VY+TD
Sbjct: 540  -VDGYPQPLMLQKSDGGYGYDSTDMAAIKYRIDKLGATQCVYITD 583


>gi|257058437|ref|YP_003136325.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588603|gb|ACU99489.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 585

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/609 (43%), Positives = 372/609 (61%), Gaps = 50/609 (8%)

Query: 476  SVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            S+ + L++ F+ A+  AF  E  D    V   +     KFGD+Q N A++L K     GE
Sbjct: 3    SINEQLTNYFSQALVKAFGAEFSDIDPIVVPASNP---KFGDYQANIALSLAKKL---GE 56

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 588
            +  P  IAQ I          N SL  + +   +A PGF+N+ +   Y   Q+K      
Sbjct: 57   Q--PRAIAQKIID--------NLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSS 106

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + V    P       +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE  GH V+RLN
Sbjct: 107  SLGVTKADPIE-----KIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLN 161

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            HVGDWGTQFGMLIA+L + +PD LT +    I DL  FYK++KKRFDEDE F++ A   V
Sbjct: 162  HVGDWGTQFGMLIAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQV 221

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ  D   + AW+++C+ SRR+FQ IYD L++ +TERGESFY   +E +V  L+ +GL
Sbjct: 222  VKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIVKELDHQGL 281

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
            L+ D G + ++      +    +P+ + KSDGG+ Y T+DLAA++ RI +++A+ I+YVT
Sbjct: 282  LKKDAGAQCVFLDGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341

Query: 822  DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
            D GQ  HF  + + AKKA I+ P    +  V FG+V GED KK KTRSG T+KL +LLDE
Sbjct: 342  DAGQANHFAQVFQVAKKAHII-PKNVEIIHVPFGLVKGEDGKKLKTRSGTTIKLRDLLDE 400

Query: 882  GL---RRSLDK-LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
             +   R+ L+K L ++ R    +   ++   Q V    +KYADLS NR  DY+FS+DKML
Sbjct: 401  AVIYARQDLEKRLAEEGRQE--SEDFIANVSQVVGISAVKYADLSQNRTSDYIFSYDKML 458

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
              +GNTA Y+LYAY RI SI+R   I+ E L+   Q   + L+ E E  L K LL++++V
Sbjct: 459  ALQGNTAPYMLYAYARIQSISREGNIDFESLQ---QEAKIILQEETEIELGKYLLQLSEV 515

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V + L  + LC+YLY++S  F+ FY+NC  ++ +     + + T RLLL + TA+ +
Sbjct: 516  IEEVEKTLLPNRLCDYLYELSKKFNRFYENCPVLKSE-----EPLRTSRLLLCDLTARTL 570

Query: 1058 KKCFDILNI 1066
            K    +L I
Sbjct: 571  KLGLSLLGI 579



 Score =  281 bits (720), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 172/426 (40%), Positives = 243/426 (57%), Gaps = 42/426 (9%)

Query: 86  SVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           S+ + L++ F+ A+  AF  E  D    V   +     KFGD+Q N A++L K     GE
Sbjct: 3   SINEQLTNYFSQALVKAFGAEFSDIDPIVVPASNP---KFGDYQANIALSLAKKL---GE 56

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 198
           +  P  IAQ I          N SL  + +   +A PGF+N+ +   Y   Q+K      
Sbjct: 57  Q--PRAIAQKIID--------NLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSS 106

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + V    P       +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE  GH V+RLN
Sbjct: 107 SLGVTKADPIE-----KIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLN 161

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           HVGDWGTQFGMLIA+L + +PD LT +    I DL  FYK++KKRFDEDE F++ A   V
Sbjct: 162 HVGDWGTQFGMLIAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQV 221

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ  D   + AW+++C+ SRR+FQ IYD L++ +TERGESFY   +E +V  L+ +GL
Sbjct: 222 VKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIVKELDHQGL 281

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
           L+ D G + ++      +    +P+ + KSDGG+ Y T+DLAA++ RI +++A+ I+YVT
Sbjct: 282 LKKDAGAQCVFLDGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341

Query: 432 DHRSYHQVLQAIAEEEKKQGISSSSS------SQTKGT-AKKMNVPVRDRMSVRDYLSDV 484
           D    +   Q     +K   I  +           KG   KK+       + +RD L + 
Sbjct: 342 DAGQANHFAQVFQVAKKAHIIPKNVEIIHVPFGLVKGEDGKKLKTRSGTTIKLRDLLDEA 401

Query: 485 FTHAVQ 490
             +A Q
Sbjct: 402 VIYARQ 407



 Score =  281 bits (720), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 163/373 (43%), Positives = 227/373 (60%), Gaps = 38/373 (10%)

Query: 1103 SVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            S+ + L++ F+ A+  AF  E  D    V   +     KFGD+Q N A++L K     GE
Sbjct: 3    SINEQLTNYFSQALVKAFGAEFSDIDPIVVPASNP---KFGDYQANIALSLAKKL---GE 56

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 1215
            +  P  IAQ I          N SL  + +   +A PGF+N+ +   Y   Q+K      
Sbjct: 57   Q--PRAIAQKIID--------NLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSS 106

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + V    P       +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE  GH V+RLN
Sbjct: 107  SLGVTKADPIE-----KIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLN 161

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            HVGDWGTQFGMLIA+L + +PD LT +    I DL  FYK++KKRFDEDE F++ A   V
Sbjct: 162  HVGDWGTQFGMLIAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQV 221

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ  D   + AW+++C+ SRR+FQ IYD L++ +TERGESFY   +E +V  L+ +GL
Sbjct: 222  VKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIVKELDHQGL 281

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
            L+ D G + ++      +    +P+ + KSDGG+ Y T+DLAA++ RI +++A+ I+YVT
Sbjct: 282  LKKDAGAQCVFLDGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341

Query: 1449 D---HRSYHQVLQ 1458
            D      + QV Q
Sbjct: 342  DAGQANHFAQVFQ 354


>gi|298491056|ref|YP_003721233.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298232974|gb|ADI64110.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 585

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/567 (45%), Positives = 358/567 (63%), Gaps = 36/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGDFQ N A++L K    +         A+ IAS +  +L     ++ +    E+A PG
Sbjct: 38   KFGDFQANVALSLSKKLGMQ---------ARVIASAIVEKL----DVSDICKPPEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   Y   Q+  I  +   GV P T N + + +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLRLQTSYLESQLNAIKTDSRLGV-PKTKNSQ-KEIVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
            GD I+R+LE+ GH+V+RLNHVGDWGTQFGMLI +L++ +P+ LT +    I DL  FY++
Sbjct: 143  GDCIARILEFHGHEVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALDIGDLVTFYRQ 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +K+RFD DE F++ A Q VV LQ    D   AW+++C+ SRR+FQ IYD LNV L ERGE
Sbjct: 203  AKQRFDADETFQETARQEVVRLQAGVEDTLHAWKLLCEQSRREFQVIYDLLNVNLIERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   +  +V  LEK GLLE + G K ++       +   +P+ I KSDGG+ Y T+DL
Sbjct: 263  SFYNPFLPAVVEDLEKTGLLEENQGAKCVFLDGFTNREGEPLPLIIQKSDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            A +R RIE+++A  I+YVTD GQ  HF    + AKKA  + P+   +  V FG+VLG++R
Sbjct: 323  ACLRYRIEKDQAKRIIYVTDAGQANHFTQFMQLAKKANWI-PDDVELVHVPFGLVLGDNR 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVAYGCIKYAD 920
            KKFKTRSGDTV+L +LLDE + R+   L+ +      E T   +    + V    +KYAD
Sbjct: 382  KKFKTRSGDTVRLRDLLDEAVSRTRADLEARLIEEGREETEEFIKNVAEVVGISAVKYAD 441

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  +YVFS+DKML  +GNTA Y+LYAY R   I+R   I+ E+L      T + L+
Sbjct: 442  LSQNRTSNYVFSYDKMLALKGNTAPYMLYAYVRTQGISREGNIDFENL---GTDTKILLK 498

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             + E  LAK LL++++V+  V +DL  + LC+YLY++S  F++FY+NC  ++ +     +
Sbjct: 499  EDAELTLAKDLLQLDEVISEVEQDLLPNRLCDYLYNLSDKFNKFYENCPVLKSE-----E 553

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIR 1067
               T RL+L + TAK +K   D+L I+
Sbjct: 554  PTRTSRLMLCDLTAKTLKLGLDLLGIK 580



 Score =  279 bits (713), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 154/320 (48%), Positives = 208/320 (65%), Gaps = 25/320 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGDFQ N A++L K    +         A+ IAS +  +L     ++ +    E+A PG
Sbjct: 38  KFGDFQANVALSLSKKLGMQ---------ARVIASAIVEKL----DVSDICKPPEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   Y   Q+  I  +   GV P T N + + +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINLRLQTSYLESQLNAIKTDSRLGV-PKTKNSQ-KEIVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
           GD I+R+LE+ GH+V+RLNHVGDWGTQFGMLI +L++ +P+ LT +    I DL  FY++
Sbjct: 143 GDCIARILEFHGHEVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALDIGDLVTFYRQ 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +K+RFD DE F++ A Q VV LQ    D   AW+++C+ SRR+FQ IYD LNV L ERGE
Sbjct: 203 AKQRFDADETFQETARQEVVRLQAGVEDTLHAWKLLCEQSRREFQVIYDLLNVNLIERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   +  +V  LEK GLLE + G K ++       +   +P+ I KSDGG+ Y T+DL
Sbjct: 263 SFYNPFLPAVVEDLEKTGLLEENQGAKCVFLDGFTNREGEPLPLIIQKSDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTD 432
           A +R RIE+++A  I+YVTD
Sbjct: 323 ACLRYRIEKDQAKRIIYVTD 342



 Score =  279 bits (713), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 154/320 (48%), Positives = 208/320 (65%), Gaps = 25/320 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGDFQ N A++L K    +         A+ IAS +  +L     ++ +    E+A PG
Sbjct: 38   KFGDFQANVALSLSKKLGMQ---------ARVIASAIVEKL----DVSDICKPPEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   Y   Q+  I  +   GV P T N + + +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLRLQTSYLESQLNAIKTDSRLGV-PKTKNSQ-KEIVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
            GD I+R+LE+ GH+V+RLNHVGDWGTQFGMLI +L++ +P+ LT +    I DL  FY++
Sbjct: 143  GDCIARILEFHGHEVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALDIGDLVTFYRQ 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +K+RFD DE F++ A Q VV LQ    D   AW+++C+ SRR+FQ IYD LNV L ERGE
Sbjct: 203  AKQRFDADETFQETARQEVVRLQAGVEDTLHAWKLLCEQSRREFQVIYDLLNVNLIERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   +  +V  LEK GLLE + G K ++       +   +P+ I KSDGG+ Y T+DL
Sbjct: 263  SFYNPFLPAVVEDLEKTGLLEENQGAKCVFLDGFTNREGEPLPLIIQKSDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            A +R RIE+++A  I+YVTD
Sbjct: 323  ACLRYRIEKDQAKRIIYVTD 342


>gi|434388354|ref|YP_007098965.1| arginyl-tRNA synthetase [Chamaesiphon minutus PCC 6605]
 gi|428019344|gb|AFY95438.1| arginyl-tRNA synthetase [Chamaesiphon minutus PCC 6605]
          Length = 585

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/602 (42%), Positives = 364/602 (60%), Gaps = 44/602 (7%)

Query: 480  YLSDVFTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            YL+     A+  A   LGD  A      V S+N K    FGD+Q N AM L K       
Sbjct: 7    YLTTQLDRAIVAA---LGDDYAGTDPLLVLSSNPK----FGDYQANMAMGLAKKLG---- 55

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             + P  IAQSI          N  +A V +  ++A PGF+N  +   Y   Q++ +  + 
Sbjct: 56   -QQPRAIAQSIVD--------NLDVAAVCEPPQIAGPGFINFTVKSSYLATQLQAMQADS 106

Query: 595  -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
             +     +K  RV+VDFSSPNIAKEMHVGHLRSTI+GD I+R+LE+ GHDV+RLNHVGDW
Sbjct: 107  RLGVAVADKPQRVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLRLNHVGDW 166

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            GTQFGMLI +L++ +P+ LT +    + D+   Y+++KKRFDED  FK+ A Q VV LQ 
Sbjct: 167  GTQFGMLILYLREAYPEALTTADALDLGDIVVLYQQAKKRFDEDAEFKEAARQEVVKLQA 226

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             DP+  KAW+++CD SRR+FQ IYDRLNV LTERGESFY  ++  +V  L+  GLL   D
Sbjct: 227  QDPESIKAWKLLCDQSRREFQVIYDRLNVNLTERGESFYNPYLAAVVEDLKATGLLVESD 286

Query: 772  GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G + ++       D   +P+ + K+DGG+ Y T+DLAAIR RI+ +KA+ I+Y+TD GQ 
Sbjct: 287  GAQCVFVPGFTNRDGDPLPLIVQKTDGGYNYATTDLAAIRYRIQTDKAERIIYITDAGQA 346

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             HF  + + AK A  + P    +  V FG+VLG+  KK KTR G++VKL ELLDE + R 
Sbjct: 347  DHFAQVFQVAKLANWI-PENVEVLHVPFGLVLGDGGKKIKTRDGESVKLKELLDEAVDRF 405

Query: 887  LDKLKDK--NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
             + L+ +      +  P  +  +   V    +KY+DLS NR  +YVFSFDKML  +GNTA
Sbjct: 406  RNDLESRLIEESRQEAPEFIDNSANIVGISAVKYSDLSQNRTSNYVFSFDKMLALQGNTA 465

Query: 945  VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
             Y++YAY R   I+R   I+ ++L     + P+ L    E  LAK LL+++ V+  V RD
Sbjct: 466  PYMMYAYVRPQGISRKGNIDYDNL---GDNAPIILNEALELTLAKHLLQLSTVIAEVERD 522

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            L  + LC+YL+++S  +++FYD    ++ +     + + T RL+L + TAK +K   D+L
Sbjct: 523  LLPNRLCQYLFELSQKYNQFYDKHSVLQAE-----EPLRTSRLMLCDLTAKTLKLGLDLL 577

Query: 1065 NI 1066
             I
Sbjct: 578  GI 579



 Score =  296 bits (757), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 165/356 (46%), Positives = 223/356 (62%), Gaps = 33/356 (9%)

Query: 90  YLSDVFTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           YL+     A+  A   LGD  A      V S+N K    FGD+Q N AM L K       
Sbjct: 7   YLTTQLDRAIVAA---LGDDYAGTDPLLVLSSNPK----FGDYQANMAMGLAKKLG---- 55

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            + P  IAQSI          N  +A V +  ++A PGF+N  +   Y   Q++ +  + 
Sbjct: 56  -QQPRAIAQSIVD--------NLDVAAVCEPPQIAGPGFINFTVKSSYLATQLQAMQADS 106

Query: 205 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
            +     +K  RV+VDFSSPNIAKEMHVGHLRSTI+GD I+R+LE+ GHDV+RLNHVGDW
Sbjct: 107 RLGVAVADKPQRVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLRLNHVGDW 166

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           GTQFGMLI +L++ +P+ LT +    + D+   Y+++KKRFDED  FK+ A Q VV LQ 
Sbjct: 167 GTQFGMLILYLREAYPEALTTADALDLGDIVVLYQQAKKRFDEDAEFKEAARQEVVKLQA 226

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            DP+  KAW+++CD SRR+FQ IYDRLNV LTERGESFY  ++  +V  L+  GLL   D
Sbjct: 227 QDPESIKAWKLLCDQSRREFQVIYDRLNVNLTERGESFYNPYLAAVVEDLKATGLLVESD 286

Query: 382 GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           G + ++       D   +P+ + K+DGG+ Y T+DLAAIR RI+ +KA+ I+Y+TD
Sbjct: 287 GAQCVFVPGFTNRDGDPLPLIVQKTDGGYNYATTDLAAIRYRIQTDKAERIIYITD 342



 Score =  296 bits (757), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 165/356 (46%), Positives = 223/356 (62%), Gaps = 33/356 (9%)

Query: 1107 YLSDVFTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            YL+     A+  A   LGD  A      V S+N K    FGD+Q N AM L K       
Sbjct: 7    YLTTQLDRAIVAA---LGDDYAGTDPLLVLSSNPK----FGDYQANMAMGLAKKLG---- 55

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             + P  IAQSI          N  +A V +  ++A PGF+N  +   Y   Q++ +  + 
Sbjct: 56   -QQPRAIAQSIVD--------NLDVAAVCEPPQIAGPGFINFTVKSSYLATQLQAMQADS 106

Query: 1222 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
             +     +K  RV+VDFSSPNIAKEMHVGHLRSTI+GD I+R+LE+ GHDV+RLNHVGDW
Sbjct: 107  RLGVAVADKPQRVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLRLNHVGDW 166

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            GTQFGMLI +L++ +P+ LT +    + D+   Y+++KKRFDED  FK+ A Q VV LQ 
Sbjct: 167  GTQFGMLILYLREAYPEALTTADALDLGDIVVLYQQAKKRFDEDAEFKEAARQEVVKLQA 226

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             DP+  KAW+++CD SRR+FQ IYDRLNV LTERGESFY  ++  +V  L+  GLL   D
Sbjct: 227  QDPESIKAWKLLCDQSRREFQVIYDRLNVNLTERGESFYNPYLAAVVEDLKATGLLVESD 286

Query: 1399 GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G + ++       D   +P+ + K+DGG+ Y T+DLAAIR RI+ +KA+ I+Y+TD
Sbjct: 287  GAQCVFVPGFTNRDGDPLPLIVQKTDGGYNYATTDLAAIRYRIQTDKAERIIYITD 342


>gi|376002096|ref|ZP_09779943.1| arginyl-tRNA synthetase [Arthrospira sp. PCC 8005]
 gi|375329482|emb|CCE15696.1| arginyl-tRNA synthetase [Arthrospira sp. PCC 8005]
          Length = 600

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/616 (42%), Positives = 368/616 (59%), Gaps = 47/616 (7%)

Query: 470  PVRDRM-----SVRDYLSDVFTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDA 522
            P+R+R      S+   +   F  A+  AF E   G     V S+N K    FGD+QCN A
Sbjct: 7    PLRNRQPKIMSSLIQQMRSRFETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVA 62

Query: 523  MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 582
            M+L K  K      NP  IA +I   +  +   +P         E+A PGF+N+ L   Y
Sbjct: 63   MSLTKRLK-----SNPRQIASTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEY 109

Query: 583  AGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 639
               Q+   + +   G+ P        V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+
Sbjct: 110  LETQLNAKLTDPRLGIAPN--GNPQNVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEF 167

Query: 640  LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEI 697
             GH V+RLNHVGDWGTQFGMLI +LQ+K+P  LT +    I DL  FY+++KKRFDEDE 
Sbjct: 168  EGHQVLRLNHVGDWGTQFGMLITYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEE 227

Query: 698  FKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQL 757
            FK+ +   VV LQ    D ++AWE++CD SRR+FQ+IYDRL++ LTERGESFY   + ++
Sbjct: 228  FKEASRDQVVRLQSGSEDSRRAWELLCDQSRREFQQIYDRLDIKLTERGESFYNPMLAEV 287

Query: 758  VPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 812
            V  LE  GLL  D G K ++ E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E
Sbjct: 288  VADLEASGLLVEDQGAKCVFLEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTE 347

Query: 813  KADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDT 872
             A  ++YVTD GQ  HF  + + A++   + P+   +  V FG+V GED KK KTRSG+T
Sbjct: 348  GATRLIYVTDAGQANHFAQVWQVARRVRWI-PDGVDVVHVPFGLVKGEDGKKLKTRSGET 406

Query: 873  VKLSELLDEGLRRSLDKLKDKNRHT--ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYV 930
            V+L +LLDE ++R+ + L+ + +      +P  +    + V    +KYADLS NR  DY+
Sbjct: 407  VRLRDLLDEAVKRAQEDLETRLQQEGRAESPEFVHHVAEVVGIDAVKYADLSQNRTSDYI 466

Query: 931  FSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKT 990
            FSFDKML  +GNTA Y+LYAY RI  I+R   I+ E +        + L+   E  LAK 
Sbjct: 467  FSFDKMLSLQGNTAPYMLYAYVRIQGISRKGSIDFEQV---GDRASIHLQDPSELTLAKH 523

Query: 991  LLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLA 1050
            LL++++V+  V ++L  + LC+YL+++S  F++FYD C  ++ D     +     RL L 
Sbjct: 524  LLQLHEVIDTVAQELLPNRLCQYLFELSQKFNQFYDRCPVLKAD-----ECDRASRLALC 578

Query: 1051 EATAKVMKKCFDILNI 1066
              TA+ ++    +L I
Sbjct: 579  HLTAETLRLGLSLLGI 594



 Score =  296 bits (757), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 170/370 (45%), Positives = 226/370 (61%), Gaps = 36/370 (9%)

Query: 80  PVRDRM-----SVRDYLSDVFTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDA 132
           P+R+R      S+   +   F  A+  AF E   G     V S+N K    FGD+QCN A
Sbjct: 7   PLRNRQPKIMSSLIQQMRSRFETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVA 62

Query: 133 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 192
           M+L K  K      NP  IA +I   +  +   +P         E+A PGF+N+ L   Y
Sbjct: 63  MSLTKRLK-----SNPRQIASTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEY 109

Query: 193 AGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 249
              Q+   + +   G+ P        V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+
Sbjct: 110 LETQLNAKLTDPRLGIAPN--GNPQNVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEF 167

Query: 250 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEI 307
            GH V+RLNHVGDWGTQFGMLI +LQ+K+P  LT +    I DL  FY+++KKRFDEDE 
Sbjct: 168 EGHQVLRLNHVGDWGTQFGMLITYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEE 227

Query: 308 FKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQL 367
           FK+ +   VV LQ    D ++AWE++CD SRR+FQ+IYDRL++ LTERGESFY   + ++
Sbjct: 228 FKEASRDQVVRLQSGSEDSRRAWELLCDQSRREFQQIYDRLDIKLTERGESFYNPMLAEV 287

Query: 368 VPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
           V  LE  GLL  D G K ++ E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E
Sbjct: 288 VADLEASGLLVEDQGAKCVFLEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTE 347

Query: 423 KADWIVYVTD 432
            A  ++YVTD
Sbjct: 348 GATRLIYVTD 357



 Score =  296 bits (757), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 170/370 (45%), Positives = 226/370 (61%), Gaps = 36/370 (9%)

Query: 1097 PVRDRM-----SVRDYLSDVFTHAVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDA 1149
            P+R+R      S+   +   F  A+  AF E   G     V S+N K    FGD+QCN A
Sbjct: 7    PLRNRQPKIMSSLIQQMRSRFETALTDAFGETVSGTDPLIVNSSNPK----FGDYQCNVA 62

Query: 1150 MALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY 1209
            M+L K  K      NP  IA +I   +  +   +P         E+A PGF+N+ L   Y
Sbjct: 63   MSLTKRLK-----SNPRQIASTIIEHLQIDDICSPP--------EIAGPGFINLRLKSEY 109

Query: 1210 AGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 1266
               Q+   + +   G+ P        V+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+
Sbjct: 110  LETQLNAKLTDPRLGIAPN--GNPQNVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEF 167

Query: 1267 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEI 1324
             GH V+RLNHVGDWGTQFGMLI +LQ+K+P  LT +    I DL  FY+++KKRFDEDE 
Sbjct: 168  EGHQVLRLNHVGDWGTQFGMLITYLQEKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEE 227

Query: 1325 FKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQL 1384
            FK+ +   VV LQ    D ++AWE++CD SRR+FQ+IYDRL++ LTERGESFY   + ++
Sbjct: 228  FKEASRDQVVRLQSGSEDSRRAWELLCDQSRREFQQIYDRLDIKLTERGESFYNPMLAEV 287

Query: 1385 VPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 1439
            V  LE  GLL  D G K ++ E     +   +P+ + KS+GG+ Y T+DLAA+R RI  E
Sbjct: 288  VADLEASGLLVEDQGAKCVFLEGFTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTE 347

Query: 1440 KADWIVYVTD 1449
             A  ++YVTD
Sbjct: 348  GATRLIYVTD 357


>gi|218245401|ref|YP_002370772.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226701374|sp|B7JVP5.1|SYR_CYAP8 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|218165879|gb|ACK64616.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 585

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 262/609 (43%), Positives = 371/609 (60%), Gaps = 50/609 (8%)

Query: 476  SVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            S+ + L++ F  A+  AF  E  D    V   +     KFGD+Q N A++L K     GE
Sbjct: 3    SINEQLTNYFIQALVKAFGAEFSDIDPIVVPASNP---KFGDYQANIALSLAKKL---GE 56

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 588
            +  P  IAQ I          N SL  + +   +A PGF+N+ +   Y   Q+K      
Sbjct: 57   Q--PRAIAQKIID--------NLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSS 106

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + V    P       +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE  GH V+RLN
Sbjct: 107  SLGVTKADPIE-----KIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLN 161

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            HVGDWGTQFGMLIA+L + +PD LT +    I DL  FYK++KKRFDEDE F++ A   V
Sbjct: 162  HVGDWGTQFGMLIAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQV 221

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ  D   + AW+++C+ SRR+FQ IYD L++ +TERGESFY   +E ++  L+ +GL
Sbjct: 222  VKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIIKELDHQGL 281

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
            L+ D G + ++      +    +P+ + KSDGG+ Y T+DLAA++ RI +++A+ I+YVT
Sbjct: 282  LKKDAGAQCVFLDGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341

Query: 822  DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
            D GQ  HF  + + AKKA I+ P    +  V FG+V GED KK KTRSG T+KL +LLDE
Sbjct: 342  DAGQANHFAQVFQVAKKAHII-PKNVEIIHVPFGLVKGEDGKKLKTRSGTTIKLRDLLDE 400

Query: 882  GL---RRSLDK-LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
             +   R+ L+K L ++ R    +   ++   Q V    +KYADLS NR  DY+FS+DKML
Sbjct: 401  AVIYARQDLEKRLAEEGRQE--SEDFIANVSQVVGISAVKYADLSQNRTSDYIFSYDKML 458

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
              +GNTA Y+LYAY RI SI+R   I+ E L+   Q   + L+ E E  L K LL++++V
Sbjct: 459  ALQGNTAPYMLYAYARIQSISREGNIDFESLQ---QEAKIILQEETEIELGKYLLQLSEV 515

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V + L  + LC+YLY++S  F+ FY+NC  ++ +     + + T RLLL + TA+ +
Sbjct: 516  IEEVEKTLLPNRLCDYLYELSKKFNRFYENCPVLKSE-----EPLRTSRLLLCDLTARTL 570

Query: 1058 KKCFDILNI 1066
            K    +L I
Sbjct: 571  KLGLSLLGI 579



 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 171/426 (40%), Positives = 242/426 (56%), Gaps = 42/426 (9%)

Query: 86  SVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           S+ + L++ F  A+  AF  E  D    V   +     KFGD+Q N A++L K     GE
Sbjct: 3   SINEQLTNYFIQALVKAFGAEFSDIDPIVVPASNP---KFGDYQANIALSLAKKL---GE 56

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 198
           +  P  IAQ I          N SL  + +   +A PGF+N+ +   Y   Q+K      
Sbjct: 57  Q--PRAIAQKIID--------NLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSS 106

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + V    P       +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE  GH V+RLN
Sbjct: 107 SLGVTKADPIE-----KIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLN 161

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           HVGDWGTQFGMLIA+L + +PD LT +    I DL  FYK++KKRFDEDE F++ A   V
Sbjct: 162 HVGDWGTQFGMLIAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQV 221

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ  D   + AW+++C+ SRR+FQ IYD L++ +TERGESFY   +E ++  L+ +GL
Sbjct: 222 VKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIIKELDHQGL 281

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
           L+ D G + ++      +    +P+ + KSDGG+ Y T+DLAA++ RI +++A+ I+YVT
Sbjct: 282 LKKDAGAQCVFLDGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341

Query: 432 DHRSYHQVLQAIAEEEKKQGISSSSS------SQTKGT-AKKMNVPVRDRMSVRDYLSDV 484
           D    +   Q     +K   I  +           KG   KK+       + +RD L + 
Sbjct: 342 DAGQANHFAQVFQVAKKAHIIPKNVEIIHVPFGLVKGEDGKKLKTRSGTTIKLRDLLDEA 401

Query: 485 FTHAVQ 490
             +A Q
Sbjct: 402 VIYARQ 407



 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 162/373 (43%), Positives = 226/373 (60%), Gaps = 38/373 (10%)

Query: 1103 SVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            S+ + L++ F  A+  AF  E  D    V   +     KFGD+Q N A++L K     GE
Sbjct: 3    SINEQLTNYFIQALVKAFGAEFSDIDPIVVPASNP---KFGDYQANIALSLAKKL---GE 56

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 1215
            +  P  IAQ I          N SL  + +   +A PGF+N+ +   Y   Q+K      
Sbjct: 57   Q--PRAIAQKIID--------NLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSS 106

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + V    P       +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE  GH V+RLN
Sbjct: 107  SLGVTKADPIE-----KIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLN 161

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            HVGDWGTQFGMLIA+L + +PD LT +    I DL  FYK++KKRFDEDE F++ A   V
Sbjct: 162  HVGDWGTQFGMLIAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQV 221

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ  D   + AW+++C+ SRR+FQ IYD L++ +TERGESFY   +E ++  L+ +GL
Sbjct: 222  VKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIIKELDHQGL 281

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
            L+ D G + ++      +    +P+ + KSDGG+ Y T+DLAA++ RI +++A+ I+YVT
Sbjct: 282  LKKDAGAQCVFLDGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341

Query: 1449 D---HRSYHQVLQ 1458
            D      + QV Q
Sbjct: 342  DAGQANHFAQVFQ 354


>gi|403224077|dbj|BAM42207.1| arginyl-tRNA synthetase [Theileria orientalis strain Shintoku]
          Length = 763

 Score =  451 bits (1161), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/588 (40%), Positives = 357/588 (60%), Gaps = 64/588 (10%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q +DAM+L K+ KD     +P ++A+ + S +TS+             I ++  G
Sbjct: 200  KFGDYQWSDAMSLFKLAKDHLTVGSPKELAEMVKSNITSD---------SFSSINISPQG 250

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+   LS  +  ++++ +  NG     ++K  RV++DFSSPNIAKEMHVGHLRST+IGD+
Sbjct: 251  FMTFVLSNKWIEQELRSLAENGPSVKQVDKGTRVVIDFSSPNIAKEMHVGHLRSTVIGDS 310

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            +SR+LE+ G+DV R+NH+GDWGTQFGMLI ++ +K+PD+++  P I+DL  FYKE+K R 
Sbjct: 311  LSRVLEFYGYDVRRINHLGDWGTQFGMLIEYMFEKYPDFMSNMPSISDLTKFYKEAKLRM 370

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 752
            D DE FK R+ + VV LQ  + + ++ W+++CD+S   F KIY RL + L   GESFY  
Sbjct: 371  DADEEFKNRSRRRVVKLQSGEEESRQVWKVLCDISLASFDKIYSRLGIRLENYGESFYND 430

Query: 753  HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 812
             +  ++  L++KG+     G  +++  D  + P+ +VKSDGGF YDT+DLA ++ RI E 
Sbjct: 431  MIPDVIRELKEKGIAVESQGAIVVF-TDVSAAPLMLVKSDGGFGYDTTDLACLKYRIFEM 489

Query: 813  KADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDT 872
            K++WI+YVTD+GQ  HF+ L            +  R+D VGFG+V  E  +KFKTRSGDT
Sbjct: 490  KSNWIIYVTDIGQSDHFKKL---------FKTDDVRIDHVGFGMVQNEFGEKFKTRSGDT 540

Query: 873  VKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFS 932
            VKL +LLDE ++RS ++L  +    +     L    +A+ YG IKY DL+H+ + +Y FS
Sbjct: 541  VKLIDLLDEAVKRSKEELIKRQPDQK----NLQRTAEALGYGSIKYFDLNHSVHSNYKFS 596

Query: 933  FDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLR-------------------VAAQ 973
            FDKMLD RGNTAVY+LY+Y RI  I + A  ++ DL                    V+A 
Sbjct: 597  FDKMLDPRGNTAVYMLYSYARICQIFKKASTSNADLNEACEHTEGQLSDNFNNQLSVSAT 656

Query: 974  STP---------------VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIS 1018
            ++P               +++EH  EF+LAK LL+   ++  + +DL ++ L +YLY+IS
Sbjct: 657  ASPDCVEDVAHKVDDLSKLTIEHPTEFSLAKCLLKFPAIMDQIHKDLSINKLTDYLYEIS 716

Query: 1019 TAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
              FS FY  C  +   ++         RL+L   T  VMK CF+++ I
Sbjct: 717  VQFSSFYTQCKVVGDPSQD-------SRLILCTCTKLVMKTCFNLIGI 757



 Score =  286 bits (732), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 138/310 (44%), Positives = 208/310 (67%), Gaps = 10/310 (3%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q +DAM+L K+ KD     +P ++A+ + S +TS+             I ++  G
Sbjct: 200 KFGDYQWSDAMSLFKLAKDHLTVGSPKELAEMVKSNITSD---------SFSSINISPQG 250

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+   LS  +  ++++ +  NG     ++K  RV++DFSSPNIAKEMHVGHLRST+IGD+
Sbjct: 251 FMTFVLSNKWIEQELRSLAENGPSVKQVDKGTRVVIDFSSPNIAKEMHVGHLRSTVIGDS 310

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           +SR+LE+ G+DV R+NH+GDWGTQFGMLI ++ +K+PD+++  P I+DL  FYKE+K R 
Sbjct: 311 LSRVLEFYGYDVRRINHLGDWGTQFGMLIEYMFEKYPDFMSNMPSISDLTKFYKEAKLRM 370

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
           D DE FK R+ + VV LQ  + + ++ W+++CD+S   F KIY RL + L   GESFY  
Sbjct: 371 DADEEFKNRSRRRVVKLQSGEEESRQVWKVLCDISLASFDKIYSRLGIRLENYGESFYND 430

Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
            +  ++  L++KG+     G  +++  D  + P+ +VKSDGGF YDT+DLA ++ RI E 
Sbjct: 431 MIPDVIRELKEKGIAVESQGAIVVF-TDVSAAPLMLVKSDGGFGYDTTDLACLKYRIFEM 489

Query: 423 KADWIVYVTD 432
           K++WI+YVTD
Sbjct: 490 KSNWIIYVTD 499



 Score =  286 bits (732), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 138/310 (44%), Positives = 208/310 (67%), Gaps = 10/310 (3%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q +DAM+L K+ KD     +P ++A+ + S +TS+             I ++  G
Sbjct: 200  KFGDYQWSDAMSLFKLAKDHLTVGSPKELAEMVKSNITSD---------SFSSINISPQG 250

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+   LS  +  ++++ +  NG     ++K  RV++DFSSPNIAKEMHVGHLRST+IGD+
Sbjct: 251  FMTFVLSNKWIEQELRSLAENGPSVKQVDKGTRVVIDFSSPNIAKEMHVGHLRSTVIGDS 310

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            +SR+LE+ G+DV R+NH+GDWGTQFGMLI ++ +K+PD+++  P I+DL  FYKE+K R 
Sbjct: 311  LSRVLEFYGYDVRRINHLGDWGTQFGMLIEYMFEKYPDFMSNMPSISDLTKFYKEAKLRM 370

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 1379
            D DE FK R+ + VV LQ  + + ++ W+++CD+S   F KIY RL + L   GESFY  
Sbjct: 371  DADEEFKNRSRRRVVKLQSGEEESRQVWKVLCDISLASFDKIYSRLGIRLENYGESFYND 430

Query: 1380 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 1439
             +  ++  L++KG+     G  +++  D  + P+ +VKSDGGF YDT+DLA ++ RI E 
Sbjct: 431  MIPDVIRELKEKGIAVESQGAIVVF-TDVSAAPLMLVKSDGGFGYDTTDLACLKYRIFEM 489

Query: 1440 KADWIVYVTD 1449
            K++WI+YVTD
Sbjct: 490  KSNWIIYVTD 499


>gi|354565464|ref|ZP_08984639.1| Arginyl-tRNA synthetase [Fischerella sp. JSC-11]
 gi|353549423|gb|EHC18865.1| Arginyl-tRNA synthetase [Fischerella sp. JSC-11]
          Length = 585

 Score =  451 bits (1161), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/579 (44%), Positives = 363/579 (62%), Gaps = 42/579 (7%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAK 561
            VA++N K    FGD+Q N A++L K        + P  IAQ+I   +  S++   P    
Sbjct: 32   VAASNPK----FGDYQANVALSLAKRLG-----QQPRAIAQAIVDQLDVSDICKPP---- 78

Query: 562  VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKE 618
                 EVA PGF+N+ L+  Y   Q+  +  +   GV      K  R +VDFSSPNIAKE
Sbjct: 79   -----EVAGPGFINLKLTTEYLEAQLAALQADSRLGVAKAKTPK--REIVDFSSPNIAKE 131

Query: 619  MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP- 677
            MHVGHLRSTIIGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ +P+ LT +   
Sbjct: 132  MHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANAL 191

Query: 678  -IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYD 736
             I DL  FYK++KKRFDEDE F+++A Q VV LQ    D   AW+++C+ SR +FQ IYD
Sbjct: 192  DIGDLVTFYKQAKKRFDEDEAFQEQARQEVVRLQAGAADTIHAWKLLCEQSRTEFQVIYD 251

Query: 737  RLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKS 791
             L++ + ERGESFY   + ++V  LE+ GLL  D G K ++ E     +   +P+ + KS
Sbjct: 252  LLDIKVQERGESFYNPFLPKVVEDLEQTGLLVEDQGAKCVFLEGFTNKEGEPLPLIVQKS 311

Query: 792  DGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDF 851
            DGG+ Y T+DLAAIR RI+E+ A  I+YVTD GQ  HF  + + A KAG + P+   +  
Sbjct: 312  DGGYNYATTDLAAIRYRIQEDHAKRIIYVTDAGQANHFAQVFQVAYKAGWV-PDDVELVH 370

Query: 852  VGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQA- 910
            V FG+VLGED KKFKTRSGDTV+L +LLDE + R+   L+++        TE  +A  A 
Sbjct: 371  VPFGLVLGEDGKKFKTRSGDTVRLRDLLDEAIARARADLENRLIQEGRQETEQFKANVAK 430

Query: 911  -VAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLR 969
             V    +KYADLS NR  +YVFS+DKML  +GNTA Y+LYAY R   I+R   ++ E L 
Sbjct: 431  VVGISAVKYADLSQNRTSNYVFSYDKMLSLKGNTAPYMLYAYVRTQGISREGNVDFEKLG 490

Query: 970  VAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCY 1029
              A+   + L+ + E  LAK LL++++++  V +DL  + LCEYLY +S  F++FY+NC 
Sbjct: 491  TDAK---ILLQEDTELTLAKHLLQLDEIISDVEQDLLPNRLCEYLYQLSDKFNKFYENCP 547

Query: 1030 CIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             ++ +     + + T RL L   TA+ +K    +L I+ 
Sbjct: 548  VLKSE-----EPIRTSRLALCYLTARTLKLGLSLLGIQV 581



 Score =  280 bits (715), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 161/343 (46%), Positives = 218/343 (63%), Gaps = 34/343 (9%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAK 171
           VA++N K    FGD+Q N A++L K        + P  IAQ+I   +  S++   P    
Sbjct: 32  VAASNPK----FGDYQANVALSLAKRLG-----QQPRAIAQAIVDQLDVSDICKPP---- 78

Query: 172 VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKE 228
                EVA PGF+N+ L+  Y   Q+  +  +   GV      K  R +VDFSSPNIAKE
Sbjct: 79  -----EVAGPGFINLKLTTEYLEAQLAALQADSRLGVAKAKTPK--REIVDFSSPNIAKE 131

Query: 229 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP- 287
           MHVGHLRSTIIGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ +P+ LT +   
Sbjct: 132 MHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANAL 191

Query: 288 -IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYD 346
            I DL  FYK++KKRFDEDE F+++A Q VV LQ    D   AW+++C+ SR +FQ IYD
Sbjct: 192 DIGDLVTFYKQAKKRFDEDEAFQEQARQEVVRLQAGAADTIHAWKLLCEQSRTEFQVIYD 251

Query: 347 RLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKS 401
            L++ + ERGESFY   + ++V  LE+ GLL  D G K ++ E     +   +P+ + KS
Sbjct: 252 LLDIKVQERGESFYNPFLPKVVEDLEQTGLLVEDQGAKCVFLEGFTNKEGEPLPLIVQKS 311

Query: 402 DGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
           DGG+ Y T+DLAAIR RI+E+ A  I+YVTD      + QV Q
Sbjct: 312 DGGYNYATTDLAAIRYRIQEDHAKRIIYVTDAGQANHFAQVFQ 354



 Score =  280 bits (715), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 161/343 (46%), Positives = 218/343 (63%), Gaps = 34/343 (9%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAK 1188
            VA++N K    FGD+Q N A++L K        + P  IAQ+I   +  S++   P    
Sbjct: 32   VAASNPK----FGDYQANVALSLAKRLG-----QQPRAIAQAIVDQLDVSDICKPP---- 78

Query: 1189 VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKE 1245
                 EVA PGF+N+ L+  Y   Q+  +  +   GV      K  R +VDFSSPNIAKE
Sbjct: 79   -----EVAGPGFINLKLTTEYLEAQLAALQADSRLGVAKAKTPK--REIVDFSSPNIAKE 131

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP- 1304
            MHVGHLRSTIIGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ +P+ LT +   
Sbjct: 132  MHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANAL 191

Query: 1305 -IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYD 1363
             I DL  FYK++KKRFDEDE F+++A Q VV LQ    D   AW+++C+ SR +FQ IYD
Sbjct: 192  DIGDLVTFYKQAKKRFDEDEAFQEQARQEVVRLQAGAADTIHAWKLLCEQSRTEFQVIYD 251

Query: 1364 RLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKS 1418
             L++ + ERGESFY   + ++V  LE+ GLL  D G K ++ E     +   +P+ + KS
Sbjct: 252  LLDIKVQERGESFYNPFLPKVVEDLEQTGLLVEDQGAKCVFLEGFTNKEGEPLPLIVQKS 311

Query: 1419 DGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            DGG+ Y T+DLAAIR RI+E+ A  I+YVTD      + QV Q
Sbjct: 312  DGGYNYATTDLAAIRYRIQEDHAKRIIYVTDAGQANHFAQVFQ 354


>gi|22298368|ref|NP_681615.1| arginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|34222744|sp|Q8DKN4.1|SYR_THEEB RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|22294547|dbj|BAC08377.1| arginyl-tRNA-synthetase [Thermosynechococcus elongatus BP-1]
          Length = 584

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/601 (42%), Positives = 367/601 (61%), Gaps = 45/601 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L D    A+Q A P        +   ++    KFGD+Q N  ++L K        K P +
Sbjct: 8    LGDRLRRALQAALPLDTYPQPLLVPASQV---KFGDYQSNVCLSLAKQLG-----KAPRE 59

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQIKDIIVNGV 595
            +AQ +   +  E    P        +E+A PGF+N      FL+      +  D +  G+
Sbjct: 60   LAQEVVPHLEVEDLCQP--------VEIAGPGFLNFRLKPEFLAATLQAARGSDRL--GI 109

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
             PP    + RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 110  -PPAREPR-RVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGHTVLRLNHVGDWGT 167

Query: 656  QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            QFGMLIA+L + +PD LT +    + DL  FYK++K+RFD D  F+++A   VVALQ+ +
Sbjct: 168  QFGMLIAYLDEVYPDALTTANALDLGDLVTFYKKAKQRFDSDPEFQQKARAKVVALQQGE 227

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
               ++AW+++C+ SRR+FQKIYD L++ LTERGESFY   +  ++  L   GLL  D G 
Sbjct: 228  EQSRRAWQLLCEQSRREFQKIYDLLDIQLTERGESFYNPFLPAVIEDLAACGLLVEDQGA 287

Query: 774  KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            K+++ E     +    P+ I KSDGG+ Y T+DLAA+R RI++++ADWI+YVTD+GQ  H
Sbjct: 288  KVVFLEGFTNKEGQPQPLIIQKSDGGYNYATTDLAALRYRIDKDQADWIIYVTDVGQSTH 347

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            F  + + A++AG + P+ T +  V FG+VLGED K+ KTRSG+T++L +LL E + RS  
Sbjct: 348  FAQVFQVAQRAGWVPPHVT-LTHVPFGLVLGEDGKRLKTRSGETIRLIDLLTEAIARSRA 406

Query: 889  KLKDK---NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
             L+ +      TE +P  +    +A+  G +KYADLS NRN +YVFS+DKML  +GNTA 
Sbjct: 407  DLEQRLATEGRTE-SPEFIDTVARAIGIGAVKYADLSQNRNSNYVFSYDKMLSLQGNTAP 465

Query: 946  YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
            YLLYAY R+  + R   I   D    +  +P+ LE E E  LAK L+++ + L LV+ +L
Sbjct: 466  YLLYAYVRVQGLTRRGDI---DWCTLSPDSPLLLEDETEQHLAKHLVQLEETLDLVSTEL 522

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILN 1065
              + LC+YL+++S  F++FYD C  +      K       RL LA  TA+ +K    +L 
Sbjct: 523  LPNRLCQYLFELSQLFNQFYDRCPILSAPQPTK-----QSRLTLAYLTAQTLKLGLSLLG 577

Query: 1066 I 1066
            I
Sbjct: 578  I 578



 Score =  282 bits (721), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 32/354 (9%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L D    A+Q A P        +   ++    KFGD+Q N  ++L K        K P +
Sbjct: 8   LGDRLRRALQAALPLDTYPQPLLVPASQV---KFGDYQSNVCLSLAKQLG-----KAPRE 59

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQIKDIIVNGV 205
           +AQ +   +  E    P        +E+A PGF+N      FL+      +  D +  G+
Sbjct: 60  LAQEVVPHLEVEDLCQP--------VEIAGPGFLNFRLKPEFLAATLQAARGSDRL--GI 109

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
            PP    + RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 110 -PPAREPR-RVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGHTVLRLNHVGDWGT 167

Query: 266 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           QFGMLIA+L + +PD LT +    + DL  FYK++K+RFD D  F+++A   VVALQ+ +
Sbjct: 168 QFGMLIAYLDEVYPDALTTANALDLGDLVTFYKKAKQRFDSDPEFQQKARAKVVALQQGE 227

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
              ++AW+++C+ SRR+FQKIYD L++ LTERGESFY   +  ++  L   GLL  D G 
Sbjct: 228 EQSRRAWQLLCEQSRREFQKIYDLLDIQLTERGESFYNPFLPAVIEDLAACGLLVEDQGA 287

Query: 384 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           K+++ E     +    P+ I KSDGG+ Y T+DLAA+R RI++++ADWI+YVTD
Sbjct: 288 KVVFLEGFTNKEGQPQPLIIQKSDGGYNYATTDLAALRYRIDKDQADWIIYVTD 341



 Score =  282 bits (721), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 32/354 (9%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L D    A+Q A P        +   ++    KFGD+Q N  ++L K        K P +
Sbjct: 8    LGDRLRRALQAALPLDTYPQPLLVPASQV---KFGDYQSNVCLSLAKQLG-----KAPRE 59

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQIKDIIVNGV 1222
            +AQ +   +  E    P        +E+A PGF+N      FL+      +  D +  G+
Sbjct: 60   LAQEVVPHLEVEDLCQP--------VEIAGPGFLNFRLKPEFLAATLQAARGSDRL--GI 109

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
             PP    + RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 110  -PPAREPR-RVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGHTVLRLNHVGDWGT 167

Query: 1283 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            QFGMLIA+L + +PD LT +    + DL  FYK++K+RFD D  F+++A   VVALQ+ +
Sbjct: 168  QFGMLIAYLDEVYPDALTTANALDLGDLVTFYKKAKQRFDSDPEFQQKARAKVVALQQGE 227

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
               ++AW+++C+ SRR+FQKIYD L++ LTERGESFY   +  ++  L   GLL  D G 
Sbjct: 228  EQSRRAWQLLCEQSRREFQKIYDLLDIQLTERGESFYNPFLPAVIEDLAACGLLVEDQGA 287

Query: 1401 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            K+++ E     +    P+ I KSDGG+ Y T+DLAA+R RI++++ADWI+YVTD
Sbjct: 288  KVVFLEGFTNKEGQPQPLIIQKSDGGYNYATTDLAALRYRIDKDQADWIIYVTD 341


>gi|427738655|ref|YP_007058199.1| arginyl-tRNA synthetase [Rivularia sp. PCC 7116]
 gi|427373696|gb|AFY57652.1| arginyl-tRNA synthetase [Rivularia sp. PCC 7116]
          Length = 586

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/567 (43%), Positives = 357/567 (62%), Gaps = 37/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N A++L K    K     P DIA  +          N  ++ + +K E+A PG
Sbjct: 38   EFGDYQANMALSLAKKLGQK-----PRDIANQVVE--------NLDVSDICEKPEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   Y   Q+  I  +   GV  PT  +  R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLRLQTSYLEAQLNSIQKDERLGV--PTAKQPKREVVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
            GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P  LT +    I DL  FYK+
Sbjct: 143  GDAIARILEFRGHDVIRLNHVGDWGTQFGMLITNLREVSPSALTTANALDIGDLVNFYKQ 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +KKRFDEDE F++++   VV LQ    D   AW+++C+ SR++FQ IYD L++ + ERGE
Sbjct: 203  AKKRFDEDEEFQEKSRNEVVKLQAGAEDTIHAWKLLCEQSRKEFQVIYDLLDIKVEERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   + ++V  L+K GLLE  DG K+++       D   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPEVVEDLDKAGLLESSDGAKVVFLKGFKNRDGQPLPLIVQKSDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R RI++E+A  ++YVTD GQ  HF  + + A +A  + P    +  V FG+VLGED 
Sbjct: 323  AALRHRIQKEEAKRLIYVTDAGQANHFAGVFQVANRANWI-PEDVEIVHVPFGLVLGEDG 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE---LSEAQQAVAYGCIKYA 919
            KK KTRSG+TV+L +LLDE + R  + L+ + +  E        ++   + V    +KYA
Sbjct: 382  KKLKTRSGETVRLRDLLDEAVSRCREDLEKRLKEEEGREETEDFIANVAKVVGISAVKYA 441

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  +Y FSFDKML  +GNTA Y+LYAY R  SI+R   I+ E+L    ++  + L
Sbjct: 442  DLSQNRTGNYKFSFDKMLALKGNTAPYMLYAYARTQSISRKGDIDYENL---GENIKIVL 498

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
            + E EF LAK +L++++V+  V ++L  + LCEYLY +S  F++F++NC  ++ +     
Sbjct: 499  KEEAEFTLAKHILQLDEVIAEVEKELLPNRLCEYLYQLSEKFNQFFENCPVLKSE----- 553

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
            + + T RL L + TA+ +K   ++L I
Sbjct: 554  EPIKTSRLALCDLTARTLKLGLNLLGI 580



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 152/320 (47%), Positives = 209/320 (65%), Gaps = 25/320 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N A++L K    K     P DIA  +          N  ++ + +K E+A PG
Sbjct: 38  EFGDYQANMALSLAKKLGQK-----PRDIANQVVE--------NLDVSDICEKPEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   Y   Q+  I  +   GV  PT  +  R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINLRLQTSYLEAQLNSIQKDERLGV--PTAKQPKREVVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
           GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P  LT +    I DL  FYK+
Sbjct: 143 GDAIARILEFRGHDVIRLNHVGDWGTQFGMLITNLREVSPSALTTANALDIGDLVNFYKQ 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +KKRFDEDE F++++   VV LQ    D   AW+++C+ SR++FQ IYD L++ + ERGE
Sbjct: 203 AKKRFDEDEEFQEKSRNEVVKLQAGAEDTIHAWKLLCEQSRKEFQVIYDLLDIKVEERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   + ++V  L+K GLLE  DG K+++       D   +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPLLPEVVEDLDKAGLLESSDGAKVVFLKGFKNRDGQPLPLIVQKSDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTD 432
           AA+R RI++E+A  ++YVTD
Sbjct: 323 AALRHRIQKEEAKRLIYVTD 342



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 152/320 (47%), Positives = 209/320 (65%), Gaps = 25/320 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N A++L K    K     P DIA  +          N  ++ + +K E+A PG
Sbjct: 38   EFGDYQANMALSLAKKLGQK-----PRDIANQVVE--------NLDVSDICEKPEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   Y   Q+  I  +   GV  PT  +  R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLRLQTSYLEAQLNSIQKDERLGV--PTAKQPKREVVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
            GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P  LT +    I DL  FYK+
Sbjct: 143  GDAIARILEFRGHDVIRLNHVGDWGTQFGMLITNLREVSPSALTTANALDIGDLVNFYKQ 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +KKRFDEDE F++++   VV LQ    D   AW+++C+ SR++FQ IYD L++ + ERGE
Sbjct: 203  AKKRFDEDEEFQEKSRNEVVKLQAGAEDTIHAWKLLCEQSRKEFQVIYDLLDIKVEERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   + ++V  L+K GLLE  DG K+++       D   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPEVVEDLDKAGLLESSDGAKVVFLKGFKNRDGQPLPLIVQKSDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            AA+R RI++E+A  ++YVTD
Sbjct: 323  AALRHRIQKEEAKRLIYVTD 342


>gi|282899871|ref|ZP_06307832.1| Arginyl-tRNA synthetase, class Ic [Cylindrospermopsis raciborskii
            CS-505]
 gi|281195141|gb|EFA70077.1| Arginyl-tRNA synthetase, class Ic [Cylindrospermopsis raciborskii
            CS-505]
          Length = 585

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/576 (43%), Positives = 363/576 (63%), Gaps = 36/576 (6%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N K    FGDFQ N A++L K    +          ++IA+ +  EL     ++ +
Sbjct: 32   VAASNPK----FGDFQANVALSLSKKLGMQ---------PRAIATSIVEEL----DVSDM 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT-LNKKLRVLVDFSSPNIAKEMHV 621
             +  E+A PGF+N+ L   Y   Q+  I  +     T +++  + +VDFSSPNIAKEMHV
Sbjct: 75   CEVPEIAGPGFINLKLQTSYLESQLNAIKTDPRLGVTRVDQPEKQIVDFSSPNIAKEMHV 134

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIA 679
            GHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGMLIA+L++ +P  LT +    I 
Sbjct: 135  GHLRSTIIGDCIARILEFRGHQVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANVLNIG 194

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL +FY+++K+RFD D  F++RA Q VV LQ    D   AW+++C  SR++FQ IYD L+
Sbjct: 195  DLVSFYRQAKQRFDADASFQERARQEVVKLQAGAEDTTHAWKLLCAQSRKEFQTIYDLLD 254

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGG 794
            + + ERGESFY   + ++V  LE  GL+E + G K ++ E     +  ++P+ + KSDGG
Sbjct: 255  IKIIERGESFYNPFLSKIVKDLETAGLVEENQGAKCVFLEGFTNREGEALPLIVQKSDGG 314

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            + Y T+DLAA+  RI E++A  I+YVTD GQ  HF    + A+KAG + P    +  + F
Sbjct: 315  YNYATTDLAALLYRIREDQAKRIIYVTDAGQANHFAQFFQVAQKAGWI-PADVELVHIPF 373

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT--ELTPTELSEAQQAVA 912
            G+VLGED KKFKTRSGDTV+L +LLDE + R+   L+ + +    + TP  +    Q V 
Sbjct: 374  GLVLGEDGKKFKTRSGDTVRLKDLLDEAVFRARTDLEARLQQEGRQETPEFIQNVAQTVG 433

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NR   YVFS+DKML  +GNTA Y+LYAY R   I+R   I+ E+L   A
Sbjct: 434  ISAVKYADLSQNRTSSYVFSYDKMLSLKGNTAPYMLYAYVRTQGISREGKIDFENL---A 490

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
                + L+ E E ALAK LL+++++L  V +DL  + LC+YLY++S  F++FYD C  ++
Sbjct: 491  PDAKIILQEETELALAKNLLQLDEILYQVEQDLLPNRLCDYLYNLSEKFNKFYDRCPVLK 550

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              AE  I+   T RL+L   TAK ++   ++L I+ 
Sbjct: 551  --AEDPIR---TSRLMLCYLTAKTLRLGLNLLGIKV 581



 Score =  268 bits (684), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 147/328 (44%), Positives = 212/328 (64%), Gaps = 25/328 (7%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N K    FGDFQ N A++L K    +          ++IA+ +  EL     ++ +
Sbjct: 32  VAASNPK----FGDFQANVALSLSKKLGMQ---------PRAIATSIVEEL----DVSDM 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT-LNKKLRVLVDFSSPNIAKEMHV 231
            +  E+A PGF+N+ L   Y   Q+  I  +     T +++  + +VDFSSPNIAKEMHV
Sbjct: 75  CEVPEIAGPGFINLKLQTSYLESQLNAIKTDPRLGVTRVDQPEKQIVDFSSPNIAKEMHV 134

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIA 289
           GHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGMLIA+L++ +P  LT +    I 
Sbjct: 135 GHLRSTIIGDCIARILEFRGHQVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANVLNIG 194

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL +FY+++K+RFD D  F++RA Q VV LQ    D   AW+++C  SR++FQ IYD L+
Sbjct: 195 DLVSFYRQAKQRFDADASFQERARQEVVKLQAGAEDTTHAWKLLCAQSRKEFQTIYDLLD 254

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGG 404
           + + ERGESFY   + ++V  LE  GL+E + G K ++ E     +  ++P+ + KSDGG
Sbjct: 255 IKIIERGESFYNPFLSKIVKDLETAGLVEENQGAKCVFLEGFTNREGEALPLIVQKSDGG 314

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           + Y T+DLAA+  RI E++A  I+YVTD
Sbjct: 315 YNYATTDLAALLYRIREDQAKRIIYVTD 342



 Score =  268 bits (684), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 147/328 (44%), Positives = 212/328 (64%), Gaps = 25/328 (7%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N K    FGDFQ N A++L K    +          ++IA+ +  EL     ++ +
Sbjct: 32   VAASNPK----FGDFQANVALSLSKKLGMQ---------PRAIATSIVEEL----DVSDM 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPT-LNKKLRVLVDFSSPNIAKEMHV 1248
             +  E+A PGF+N+ L   Y   Q+  I  +     T +++  + +VDFSSPNIAKEMHV
Sbjct: 75   CEVPEIAGPGFINLKLQTSYLESQLNAIKTDPRLGVTRVDQPEKQIVDFSSPNIAKEMHV 134

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIA 1306
            GHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGMLIA+L++ +P  LT +    I 
Sbjct: 135  GHLRSTIIGDCIARILEFRGHQVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANVLNIG 194

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL +FY+++K+RFD D  F++RA Q VV LQ    D   AW+++C  SR++FQ IYD L+
Sbjct: 195  DLVSFYRQAKQRFDADASFQERARQEVVKLQAGAEDTTHAWKLLCAQSRKEFQTIYDLLD 254

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGG 1421
            + + ERGESFY   + ++V  LE  GL+E + G K ++ E     +  ++P+ + KSDGG
Sbjct: 255  IKIIERGESFYNPFLSKIVKDLETAGLVEENQGAKCVFLEGFTNREGEALPLIVQKSDGG 314

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            + Y T+DLAA+  RI E++A  I+YVTD
Sbjct: 315  YNYATTDLAALLYRIREDQAKRIIYVTD 342


>gi|254432045|ref|ZP_05045748.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626498|gb|EDY39057.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 604

 Score =  448 bits (1153), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/561 (44%), Positives = 346/561 (61%), Gaps = 38/561 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGDFQ N A+ L K  K            ++IA+ +  +L  +P+ A++  + ++A PG
Sbjct: 45   EFGDFQANGALPLAKPLKQP---------PRAIATAIVEQLKADPTFAELCGEPQIAGPG 95

Query: 573  FVNVFL--SRVYA--GEQIKD--IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+ L   R+ A   E++ D  + V     P   +   V+VDFSSPNIAKEMHVGHLRS
Sbjct: 96   FINLTLRPERLAAEVAERLADPRLGVPSAAGPGGEEPAPVVVDFSSPNIAKEMHVGHLRS 155

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAF 684
            TIIGD ++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ LT +  +   DL AF
Sbjct: 156  TIIGDALARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDLGDLVAF 215

Query: 685  YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 744
            Y+++K RFD DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+E
Sbjct: 216  YRQAKARFDADEAFQATSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSE 275

Query: 745  RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDT 799
            RGESFY  ++E +V  LE  GLL  D G + ++     G+D   +P+ + KSDGGF Y T
Sbjct: 276  RGESFYNPYLEAVVADLEAAGLLVTDAGARCVFLEGVSGKDGQPLPVIVQKSDGGFNYAT 335

Query: 800  SDLAAIRQRI----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFG 855
            +DLAAIR R     + + A  ++YVTD GQ  HF  + + A++AG + P   R++ V FG
Sbjct: 336  TDLAAIRYRFAPPPQGDGARRVIYVTDAGQASHFAGVFQVARRAGWV-PTGARLEHVPFG 394

Query: 856  VVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAY 913
            +V GED KK KTR+GDTV+L +LLDE + R+   L+ + +  E T  E  +      V  
Sbjct: 395  LVQGEDGKKLKTRAGDTVRLRDLLDEAVERAEADLRRRLQEEERTEDEAFIEHVATTVGL 454

Query: 914  GCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQ 973
              +KYADLS NR  +Y FSFD+ML  +GNTA YLLYA  RIA IAR  G    DL  A +
Sbjct: 455  AAVKYADLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG----DLEGAVE 510

Query: 974  STPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK 1033
            ++ +     +E+ALA+ LL+ + V+  V  +L  + LC YL+++S  F+ FYD    ++ 
Sbjct: 511  ASSLRFSEPQEWALARELLKFDAVVAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLKA 570

Query: 1034 DAEGKIKTVHTGRLLLAEATA 1054
            + E     V   RL L   TA
Sbjct: 571  EPE-----VRAARLALCRLTA 586



 Score =  288 bits (737), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 153/327 (46%), Positives = 211/327 (64%), Gaps = 26/327 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGDFQ N A+ L K  K            ++IA+ +  +L  +P+ A++  + ++A PG
Sbjct: 45  EFGDFQANGALPLAKPLKQP---------PRAIATAIVEQLKADPTFAELCGEPQIAGPG 95

Query: 183 FVNVFL--SRVYA--GEQIKD--IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+ L   R+ A   E++ D  + V     P   +   V+VDFSSPNIAKEMHVGHLRS
Sbjct: 96  FINLTLRPERLAAEVAERLADPRLGVPSAAGPGGEEPAPVVVDFSSPNIAKEMHVGHLRS 155

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAF 294
           TIIGD ++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ LT +  +   DL AF
Sbjct: 156 TIIGDALARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDLGDLVAF 215

Query: 295 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 354
           Y+++K RFD DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+E
Sbjct: 216 YRQAKARFDADEAFQATSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSE 275

Query: 355 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDT 409
           RGESFY  ++E +V  LE  GLL  D G + ++     G+D   +P+ + KSDGGF Y T
Sbjct: 276 RGESFYNPYLEAVVADLEAAGLLVTDAGARCVFLEGVSGKDGQPLPVIVQKSDGGFNYAT 335

Query: 410 SDLAAIRQRI----EEEKADWIVYVTD 432
           +DLAAIR R     + + A  ++YVTD
Sbjct: 336 TDLAAIRYRFAPPPQGDGARRVIYVTD 362



 Score =  288 bits (737), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 153/327 (46%), Positives = 211/327 (64%), Gaps = 26/327 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGDFQ N A+ L K  K            ++IA+ +  +L  +P+ A++  + ++A PG
Sbjct: 45   EFGDFQANGALPLAKPLKQP---------PRAIATAIVEQLKADPTFAELCGEPQIAGPG 95

Query: 1200 FVNVFL--SRVYA--GEQIKD--IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+ L   R+ A   E++ D  + V     P   +   V+VDFSSPNIAKEMHVGHLRS
Sbjct: 96   FINLTLRPERLAAEVAERLADPRLGVPSAAGPGGEEPAPVVVDFSSPNIAKEMHVGHLRS 155

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAF 1311
            TIIGD ++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ LT +  +   DL AF
Sbjct: 156  TIIGDALARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDLGDLVAF 215

Query: 1312 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 1371
            Y+++K RFD DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+E
Sbjct: 216  YRQAKARFDADEAFQATSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSE 275

Query: 1372 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDT 1426
            RGESFY  ++E +V  LE  GLL  D G + ++     G+D   +P+ + KSDGGF Y T
Sbjct: 276  RGESFYNPYLEAVVADLEAAGLLVTDAGARCVFLEGVSGKDGQPLPVIVQKSDGGFNYAT 335

Query: 1427 SDLAAIRQRI----EEEKADWIVYVTD 1449
            +DLAAIR R     + + A  ++YVTD
Sbjct: 336  TDLAAIRYRFAPPPQGDGARRVIYVTD 362


>gi|452824872|gb|EME31872.1| arginyl-tRNA synthetase [Galdieria sulphuraria]
          Length = 681

 Score =  448 bits (1152), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/611 (40%), Positives = 373/611 (61%), Gaps = 38/611 (6%)

Query: 471  VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFK 530
            ++  M+ R+ L++  T A+   FP+  +    + +       +FGD+Q N A++L K   
Sbjct: 92   IQSDMTTRELLANRVTQALTNLFPDENNWEPQLTAATRP---EFGDYQSNAALSLAK--- 145

Query: 531  DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 590
                K NP  +A+ IA         +  +  + ++ +VA PGFVN  L + Y   Q++ +
Sbjct: 146  --KRKMNPLQVAEQIAQ--------HTQMNDICEQPQVAPPGFVNFTLKKQYVAIQLQKM 195

Query: 591  IVN----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
            + +    G+ P    +K RVLVDFSSPNIAKEMHVGHLRSTIIGD + R+LE+LGH V+R
Sbjct: 196  LADPQRLGISPR--ERKERVLVDFSSPNIAKEMHVGHLRSTIIGDCLCRVLEFLGHQVLR 253

Query: 647  LNHVGDWGTQFGMLIAHLQDKFPDYL--TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 704
            +NHVGDWGTQFGMLIA+L++  PD L  T S  + DL  FYK +K+RFDED +F++ A +
Sbjct: 254  INHVGDWGTQFGMLIAYLKEMKPDALMETSSTSLGDLVEFYKAAKRRFDEDSVFQETARK 313

Query: 705  CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 764
             VVALQ  D +   AW  +C+ SR++FQ+IYD L+V LTERGESFY + +  +   LE  
Sbjct: 314  EVVALQAGDENSIHAWSFLCEQSRKEFQQIYDMLDVKLTERGESFYNEWLGIVCKELEDT 373

Query: 765  GLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
            G+   D+G   ++     G      P+ + KSDGGF Y T+D+AAIR R++E+KAD I+Y
Sbjct: 374  GVAVRDEGALCIFVGGHTGRQGKIQPLIVRKSDGGFNYATTDMAAIRYRVKEDKADRILY 433

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
            +TD GQ +HF  + E AKK G     +T+++ V FG+V  E  KKFKTR G+TVKL +LL
Sbjct: 434  ITDAGQSLHFSQVFEAAKKIGYAKL-ETKLEHVPFGLVQSEGGKKFKTREGETVKLKDLL 492

Query: 880  DEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
             E +RR+ +  + + +      +E  +      +  G IKYADL +NR  +Y FS+ KML
Sbjct: 493  QEAVRRAEEDFRKRLQAEGREESEEYIKRVAHVIGIGAIKYADLKNNRTSNYQFSYTKML 552

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
              +GNTA Y+LYA+ RI  I R   ++  D +  ++S    L+   E +LAK LL++ ++
Sbjct: 553  SLQGNTAPYMLYAFARIQGIYRKGDLDLSDGQ--SESIQFILDDPTELSLAKMLLQLEEM 610

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            L L+ RDL  + LC+Y++++S  F++FY+ C  ++ ++  +     T RL L + TA  +
Sbjct: 611  LYLLERDLKPNILCDYMFELSQRFNQFYETCPVLKAESLQR----KTSRLALCKLTANTL 666

Query: 1058 KKCFDILNIRT 1068
            + C  +L I T
Sbjct: 667  QLCLHLLGIPT 677



 Score =  296 bits (758), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 164/376 (43%), Positives = 235/376 (62%), Gaps = 32/376 (8%)

Query: 81  VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFK 140
           ++  M+ R+ L++  T A+   FP+  +    + +       +FGD+Q N A++L K   
Sbjct: 92  IQSDMTTRELLANRVTQALTNLFPDENNWEPQLTAATRP---EFGDYQSNAALSLAK--- 145

Query: 141 DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 200
               K NP  +A+ IA         +  +  + ++ +VA PGFVN  L + Y   Q++ +
Sbjct: 146 --KRKMNPLQVAEQIAQ--------HTQMNDICEQPQVAPPGFVNFTLKKQYVAIQLQKM 195

Query: 201 IVN----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
           + +    G+ P    +K RVLVDFSSPNIAKEMHVGHLRSTIIGD + R+LE+LGH V+R
Sbjct: 196 LADPQRLGISPR--ERKERVLVDFSSPNIAKEMHVGHLRSTIIGDCLCRVLEFLGHQVLR 253

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYL--TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 314
           +NHVGDWGTQFGMLIA+L++  PD L  T S  + DL  FYK +K+RFDED +F++ A +
Sbjct: 254 INHVGDWGTQFGMLIAYLKEMKPDALMETSSTSLGDLVEFYKAAKRRFDEDSVFQETARK 313

Query: 315 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 374
            VVALQ  D +   AW  +C+ SR++FQ+IYD L+V LTERGESFY + +  +   LE  
Sbjct: 314 EVVALQAGDENSIHAWSFLCEQSRKEFQQIYDMLDVKLTERGESFYNEWLGIVCKELEDT 373

Query: 375 GLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 429
           G+   D+G   ++     G      P+ + KSDGGF Y T+D+AAIR R++E+KAD I+Y
Sbjct: 374 GVAVRDEGALCIFVGGHTGRQGKIQPLIVRKSDGGFNYATTDMAAIRYRVKEDKADRILY 433

Query: 430 VTDH-RSYH--QVLQA 442
           +TD  +S H  QV +A
Sbjct: 434 ITDAGQSLHFSQVFEA 449



 Score =  296 bits (757), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 159/363 (43%), Positives = 228/363 (62%), Gaps = 29/363 (7%)

Query: 1098 VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFK 1157
            ++  M+ R+ L++  T A+   FP+  +    + +       +FGD+Q N A++L K   
Sbjct: 92   IQSDMTTRELLANRVTQALTNLFPDENNWEPQLTAATRP---EFGDYQSNAALSLAK--- 145

Query: 1158 DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 1217
                K NP  +A+ IA         +  +  + ++ +VA PGFVN  L + Y   Q++ +
Sbjct: 146  --KRKMNPLQVAEQIAQ--------HTQMNDICEQPQVAPPGFVNFTLKKQYVAIQLQKM 195

Query: 1218 IVN----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
            + +    G+ P    +K RVLVDFSSPNIAKEMHVGHLRSTIIGD + R+LE+LGH V+R
Sbjct: 196  LADPQRLGISPR--ERKERVLVDFSSPNIAKEMHVGHLRSTIIGDCLCRVLEFLGHQVLR 253

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYL--TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 1331
            +NHVGDWGTQFGMLIA+L++  PD L  T S  + DL  FYK +K+RFDED +F++ A +
Sbjct: 254  INHVGDWGTQFGMLIAYLKEMKPDALMETSSTSLGDLVEFYKAAKRRFDEDSVFQETARK 313

Query: 1332 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 1391
             VVALQ  D +   AW  +C+ SR++FQ+IYD L+V LTERGESFY + +  +   LE  
Sbjct: 314  EVVALQAGDENSIHAWSFLCEQSRKEFQQIYDMLDVKLTERGESFYNEWLGIVCKELEDT 373

Query: 1392 GLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 1446
            G+   D+G   ++     G      P+ + KSDGGF Y T+D+AAIR R++E+KAD I+Y
Sbjct: 374  GVAVRDEGALCIFVGGHTGRQGKIQPLIVRKSDGGFNYATTDMAAIRYRVKEDKADRILY 433

Query: 1447 VTD 1449
            +TD
Sbjct: 434  ITD 436


>gi|282897066|ref|ZP_06305068.1| Arginyl-tRNA synthetase, class Ic [Raphidiopsis brookii D9]
 gi|281197718|gb|EFA72612.1| Arginyl-tRNA synthetase, class Ic [Raphidiopsis brookii D9]
          Length = 585

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/565 (44%), Positives = 355/565 (62%), Gaps = 40/565 (7%)

Query: 503  VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
            VA++N K    FGDFQ N A++L         KK   D  +SIA+ +  EL     ++ +
Sbjct: 32   VAASNPK----FGDFQANVALSL--------SKKLGMD-PRSIAAAIVEEL----DVSDL 74

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEM 619
             +  E+A PGF+N+ L   Y   Q+  I  +   GV  P +++  + +VDFSSPNIAKEM
Sbjct: 75   CEVPEIAGPGFINLKLQISYLESQLNAIKTDPRLGV--PRVDQPQKQIVDFSSPNIAKEM 132

Query: 620  HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--P 677
            HVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGMLIA+L++ +P  LT +    
Sbjct: 133  HVGHLRSTIIGDCIARILEFRGHQVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANVLN 192

Query: 678  IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDR 737
            I DL +FY+++K+RFD D  F++ A Q VV LQ    D   AW ++C  SR++FQ IYD 
Sbjct: 193  IGDLVSFYRQAKQRFDADPTFQEIARQEVVRLQAGAEDTTHAWNLLCAQSRKEFQTIYDL 252

Query: 738  LNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSD 792
            L++ + ERGESFY   + ++V  LEK GL+E + G K ++ E     +  ++P+ + KSD
Sbjct: 253  LDIKIVERGESFYNPFLSKIVEDLEKAGLVEENQGAKCVFLEGFTNREGEALPLIVQKSD 312

Query: 793  GGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFV 852
            GG+ Y T+DLAA+  RI E+ A  I+YVTD GQ  HF    + A+KAG + P+   +  +
Sbjct: 313  GGYNYATTDLAALLYRIREDHAKRIIYVTDAGQANHFAQFFQVAQKAGWI-PDDVELVHI 371

Query: 853  GFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT--ELTPTELSEAQQA 910
             FG+VLGED KKFKTRSGDTV+L +LLDE + R+   L+ + +    + TP  +    Q 
Sbjct: 372  PFGLVLGEDGKKFKTRSGDTVRLKDLLDEAVFRARTDLEARLQQEGRQETPEFIHNVAQT 431

Query: 911  VAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRV 970
            V    +KYADLS NR   YVFS+DKML  +GNTA Y+LYAY R   I+R   I+ E+L  
Sbjct: 432  VGISAVKYADLSQNRTSSYVFSYDKMLSLKGNTAPYMLYAYVRTQGISREGKIDFENL-- 489

Query: 971  AAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYC 1030
             A    + L+ E E ALAK LL+++D+L  V +DL  + LCEYLY +S  F++FYD C  
Sbjct: 490  -APDAKIILQEETELALAKHLLQLDDILYQVEQDLLPNRLCEYLYSLSEKFNKFYDRCPV 548

Query: 1031 IEKDAEGKIKTVHTGRLLLAEATAK 1055
            ++ +       + T RL+L   TA+
Sbjct: 549  LKTE-----DPIRTSRLMLCYVTAR 568



 Score =  270 bits (690), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 213/330 (64%), Gaps = 29/330 (8%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA++N K    FGDFQ N A++L         KK   D  +SIA+ +  EL     ++ +
Sbjct: 32  VAASNPK----FGDFQANVALSL--------SKKLGMD-PRSIAAAIVEEL----DVSDL 74

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEM 229
            +  E+A PGF+N+ L   Y   Q+  I  +   GV  P +++  + +VDFSSPNIAKEM
Sbjct: 75  CEVPEIAGPGFINLKLQISYLESQLNAIKTDPRLGV--PRVDQPQKQIVDFSSPNIAKEM 132

Query: 230 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--P 287
           HVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGMLIA+L++ +P  LT +    
Sbjct: 133 HVGHLRSTIIGDCIARILEFRGHQVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANVLN 192

Query: 288 IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDR 347
           I DL +FY+++K+RFD D  F++ A Q VV LQ    D   AW ++C  SR++FQ IYD 
Sbjct: 193 IGDLVSFYRQAKQRFDADPTFQEIARQEVVRLQAGAEDTTHAWNLLCAQSRKEFQTIYDL 252

Query: 348 LNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSD 402
           L++ + ERGESFY   + ++V  LEK GL+E + G K ++ E     +  ++P+ + KSD
Sbjct: 253 LDIKIVERGESFYNPFLSKIVEDLEKAGLVEENQGAKCVFLEGFTNREGEALPLIVQKSD 312

Query: 403 GGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           GG+ Y T+DLAA+  RI E+ A  I+YVTD
Sbjct: 313 GGYNYATTDLAALLYRIREDHAKRIIYVTD 342



 Score =  270 bits (690), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 213/330 (64%), Gaps = 29/330 (8%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA++N K    FGDFQ N A++L         KK   D  +SIA+ +  EL     ++ +
Sbjct: 32   VAASNPK----FGDFQANVALSL--------SKKLGMD-PRSIAAAIVEEL----DVSDL 74

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEM 1246
             +  E+A PGF+N+ L   Y   Q+  I  +   GV  P +++  + +VDFSSPNIAKEM
Sbjct: 75   CEVPEIAGPGFINLKLQISYLESQLNAIKTDPRLGV--PRVDQPQKQIVDFSSPNIAKEM 132

Query: 1247 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--P 1304
            HVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGTQFGMLIA+L++ +P  LT +    
Sbjct: 133  HVGHLRSTIIGDCIARILEFRGHQVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANVLN 192

Query: 1305 IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDR 1364
            I DL +FY+++K+RFD D  F++ A Q VV LQ    D   AW ++C  SR++FQ IYD 
Sbjct: 193  IGDLVSFYRQAKQRFDADPTFQEIARQEVVRLQAGAEDTTHAWNLLCAQSRKEFQTIYDL 252

Query: 1365 LNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSD 1419
            L++ + ERGESFY   + ++V  LEK GL+E + G K ++ E     +  ++P+ + KSD
Sbjct: 253  LDIKIVERGESFYNPFLSKIVEDLEKAGLVEENQGAKCVFLEGFTNREGEALPLIVQKSD 312

Query: 1420 GGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            GG+ Y T+DLAA+  RI E+ A  I+YVTD
Sbjct: 313  GGYNYATTDLAALLYRIREDHAKRIIYVTD 342


>gi|443478276|ref|ZP_21068050.1| arginyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
 gi|443016466|gb|ELS31121.1| arginyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
          Length = 580

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/597 (43%), Positives = 363/597 (60%), Gaps = 48/597 (8%)

Query: 486  THAVQVAFPELGDK-TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIA-Q 543
            + A+  AF E  D    +VA + +    KFGD+QCN A+ L K  K K     P D+A Q
Sbjct: 14   SKAIAAAFGEAYDNYDPAVAPSKDA---KFGDYQCNAALGLTKKLKQK-----PQDVAAQ 65

Query: 544  SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII-VNGVQPPTLNK 602
             IA++   ++   P+         +A  GF+N+ L   Y   Q+  +   + +    ++K
Sbjct: 66   IIANLQVDDIFEPPT---------IAGAGFINLKLKLSYLETQLAKMQKSDRLAIAKVDK 116

Query: 603  KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 662
              RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGTQFGMLI 
Sbjct: 117  PERVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFQGHEVLRLNHVGDWGTQFGMLIT 176

Query: 663  HLQDKFPDYLTKSPPIA--DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
            +L++ +PD LTK+  IA  DL   Y+ +KKRFDED  FK+ +   VV LQ    + K AW
Sbjct: 177  YLREVYPDALTKADAIAIGDLVELYRAAKKRFDEDAEFKEISRAAVVELQAGGAEAKLAW 236

Query: 721  EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE- 779
            +++C+ SRR+FQKIYD LN+ L ERGESFY   +  +V  L + GLL+ D G   ++ E 
Sbjct: 237  QLLCEQSRREFQKIYDTLNIQLEERGESFYNAFLADVVTDLRETGLLQEDQGALCVFLEG 296

Query: 780  ----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
                D   +P+ I K+DGG+ Y T+DLAA+R RI E+KA  I+YVTD+GQ  HF  + + 
Sbjct: 297  FSNKDGQPLPLIIQKTDGGYNYATTDLAALRYRINEDKATRIIYVTDIGQAGHFAQVFQV 356

Query: 836  AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
            AK+A  + P   +   V FG+V+GED KKFKTRSGDT+ L  LL+E + R+   ++ +N 
Sbjct: 357  AKRANWI-PETVQTTHVPFGLVMGEDGKKFKTRSGDTIALKSLLEEAVVRARTDIEIRN- 414

Query: 896  HTELTPTELSEAQQ----AVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
                 P    E +Q    AV  G +KYADLS NR  +Y+FSFDKML  +GNTA Y+LYAY
Sbjct: 415  -----PDASDEFKQDVAEAVGLGAVKYADLSQNRTSNYIFSFDKMLALQGNTAPYMLYAY 469

Query: 952  TRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
             R+  I R   I+   L  A     + L  + E  LAK LL+  + +  V  +L  + LC
Sbjct: 470  VRVQGIGRKGEIDFTSLDAA-----IHLTQDPEIVLAKHLLQFAEAIDAVAEELFPNRLC 524

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +YL+++S  F++F++ C  ++ +   +I      RL L + TAK +K   ++L IR 
Sbjct: 525  QYLFELSQKFNQFFEQCPVLQAEESERIS-----RLSLCDITAKTLKLGLNLLGIRV 576



 Score =  286 bits (733), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 162/347 (46%), Positives = 221/347 (63%), Gaps = 27/347 (7%)

Query: 96  THAVQVAFPELGDK-TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIA-Q 153
           + A+  AF E  D    +VA + +    KFGD+QCN A+ L K  K K     P D+A Q
Sbjct: 14  SKAIAAAFGEAYDNYDPAVAPSKDA---KFGDYQCNAALGLTKKLKQK-----PQDVAAQ 65

Query: 154 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII-VNGVQPPTLNK 212
            IA++   ++   P+         +A  GF+N+ L   Y   Q+  +   + +    ++K
Sbjct: 66  IIANLQVDDIFEPPT---------IAGAGFINLKLKLSYLETQLAKMQKSDRLAIAKVDK 116

Query: 213 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 272
             RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGTQFGMLI 
Sbjct: 117 PERVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFQGHEVLRLNHVGDWGTQFGMLIT 176

Query: 273 HLQDKFPDYLTKSPPIA--DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 330
           +L++ +PD LTK+  IA  DL   Y+ +KKRFDED  FK+ +   VV LQ    + K AW
Sbjct: 177 YLREVYPDALTKADAIAIGDLVELYRAAKKRFDEDAEFKEISRAAVVELQAGGAEAKLAW 236

Query: 331 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE- 389
           +++C+ SRR+FQKIYD LN+ L ERGESFY   +  +V  L + GLL+ D G   ++ E 
Sbjct: 237 QLLCEQSRREFQKIYDTLNIQLEERGESFYNAFLADVVTDLRETGLLQEDQGALCVFLEG 296

Query: 390 ----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
               D   +P+ I K+DGG+ Y T+DLAA+R RI E+KA  I+YVTD
Sbjct: 297 FSNKDGQPLPLIIQKTDGGYNYATTDLAALRYRINEDKATRIIYVTD 343



 Score =  286 bits (733), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 162/347 (46%), Positives = 221/347 (63%), Gaps = 27/347 (7%)

Query: 1113 THAVQVAFPELGDK-TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIA-Q 1170
            + A+  AF E  D    +VA + +    KFGD+QCN A+ L K  K K     P D+A Q
Sbjct: 14   SKAIAAAFGEAYDNYDPAVAPSKDA---KFGDYQCNAALGLTKKLKQK-----PQDVAAQ 65

Query: 1171 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII-VNGVQPPTLNK 1229
             IA++   ++   P+         +A  GF+N+ L   Y   Q+  +   + +    ++K
Sbjct: 66   IIANLQVDDIFEPPT---------IAGAGFINLKLKLSYLETQLAKMQKSDRLAIAKVDK 116

Query: 1230 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 1289
              RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGTQFGMLI 
Sbjct: 117  PERVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFQGHEVLRLNHVGDWGTQFGMLIT 176

Query: 1290 HLQDKFPDYLTKSPPIA--DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            +L++ +PD LTK+  IA  DL   Y+ +KKRFDED  FK+ +   VV LQ    + K AW
Sbjct: 177  YLREVYPDALTKADAIAIGDLVELYRAAKKRFDEDAEFKEISRAAVVELQAGGAEAKLAW 236

Query: 1348 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE- 1406
            +++C+ SRR+FQKIYD LN+ L ERGESFY   +  +V  L + GLL+ D G   ++ E 
Sbjct: 237  QLLCEQSRREFQKIYDTLNIQLEERGESFYNAFLADVVTDLRETGLLQEDQGALCVFLEG 296

Query: 1407 ----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
                D   +P+ I K+DGG+ Y T+DLAA+R RI E+KA  I+YVTD
Sbjct: 297  FSNKDGQPLPLIIQKTDGGYNYATTDLAALRYRINEDKATRIIYVTD 343


>gi|300867420|ref|ZP_07112075.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300334610|emb|CBN57243.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 581

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/555 (45%), Positives = 355/555 (63%), Gaps = 36/555 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+QCN AM+L K        K P  IA +I          N  +A + +   +A PG
Sbjct: 34   KFGDYQCNAAMSLTKKLG-----KPPRAIASAIIE--------NLDVADLCETPTIAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   Y   ++  I  N   G+ P    +  RV +DFSSPNIAKEMHVGHLRSTII
Sbjct: 81   FINLTLKPEYLEGEVNAIANNPRLGIAPTKTPQ--RVAIDFSSPNIAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
            GD ++R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT +    + DL  FY++
Sbjct: 139  GDCLARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPEALTTADALDLGDLVDFYRK 198

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +KKRFDEDE FK+ A Q VV LQ    D ++AW ++C+ SRR+FQ IYD L++ LTERGE
Sbjct: 199  AKKRFDEDETFKETARQEVVRLQAGAEDTRRAWNLLCEQSRREFQVIYDLLDIKLTERGE 258

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   +  +V  L K GLL  D+G K ++ E     +   +P+ + KSDGGF Y T+DL
Sbjct: 259  SFYNPLLPGVVEDLTKLGLLVEDNGAKCVFIEGFTNKEGEPLPLIVQKSDGGFNYATTDL 318

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R RIE++ A+ ++YVTD GQ  HF    + A+KAG + P+   +  V FG+VLGED 
Sbjct: 319  AALRYRIEKDGANRLIYVTDSGQANHFAQFFQVARKAGWI-PDDVEIVHVPFGLVLGEDG 377

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYAD 920
            KK KTRSG+TV+L +LLDE + RS   L+ + +  +   TE  ++   + +    +KYAD
Sbjct: 378  KKSKTRSGETVRLRDLLDEAIVRSRADLEKRLQEEKREETEEFIANVAKVIGLSAVKYAD 437

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  +Y FS+DKMLD +GNTA YLLYAY R+  I R   IN ++L   A+   V L+
Sbjct: 438  LSQNRTSNYTFSYDKMLDLKGNTAPYLLYAYVRVKGIGRKGEINFDNLGADAK---VILK 494

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             + E  LAK LL++++V+  V  DL  + +C+YL+++S  F++F++ C  ++ +     +
Sbjct: 495  EDAELVLAKHLLQLSEVVGAVEGDLLPNRICQYLFELSQKFNQFFEQCPVLKSE-----E 549

Query: 1041 TVHTGRLLLAEATAK 1055
             + T RL+L + TAK
Sbjct: 550  PLRTSRLVLCDLTAK 564



 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/329 (47%), Positives = 212/329 (64%), Gaps = 25/329 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+QCN AM+L K        K P  IA +I          N  +A + +   +A PG
Sbjct: 34  KFGDYQCNAAMSLTKKLG-----KPPRAIASAIIE--------NLDVADLCETPTIAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   Y   ++  I  N   G+ P    +  RV +DFSSPNIAKEMHVGHLRSTII
Sbjct: 81  FINLTLKPEYLEGEVNAIANNPRLGIAPTKTPQ--RVAIDFSSPNIAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
           GD ++R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT +    + DL  FY++
Sbjct: 139 GDCLARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPEALTTADALDLGDLVDFYRK 198

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +KKRFDEDE FK+ A Q VV LQ    D ++AW ++C+ SRR+FQ IYD L++ LTERGE
Sbjct: 199 AKKRFDEDETFKETARQEVVRLQAGAEDTRRAWNLLCEQSRREFQVIYDLLDIKLTERGE 258

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   +  +V  L K GLL  D+G K ++ E     +   +P+ + KSDGGF Y T+DL
Sbjct: 259 SFYNPLLPGVVEDLTKLGLLVEDNGAKCVFIEGFTNKEGEPLPLIVQKSDGGFNYATTDL 318

Query: 413 AAIRQRIEEEKADWIVYVTDHRSYHQVLQ 441
           AA+R RIE++ A+ ++YVTD    +   Q
Sbjct: 319 AALRYRIEKDGANRLIYVTDSGQANHFAQ 347



 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/329 (47%), Positives = 212/329 (64%), Gaps = 25/329 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+QCN AM+L K        K P  IA +I          N  +A + +   +A PG
Sbjct: 34   KFGDYQCNAAMSLTKKLG-----KPPRAIASAIIE--------NLDVADLCETPTIAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   Y   ++  I  N   G+ P    +  RV +DFSSPNIAKEMHVGHLRSTII
Sbjct: 81   FINLTLKPEYLEGEVNAIANNPRLGIAPTKTPQ--RVAIDFSSPNIAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
            GD ++R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT +    + DL  FY++
Sbjct: 139  GDCLARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPEALTTADALDLGDLVDFYRK 198

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +KKRFDEDE FK+ A Q VV LQ    D ++AW ++C+ SRR+FQ IYD L++ LTERGE
Sbjct: 199  AKKRFDEDETFKETARQEVVRLQAGAEDTRRAWNLLCEQSRREFQVIYDLLDIKLTERGE 258

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   +  +V  L K GLL  D+G K ++ E     +   +P+ + KSDGGF Y T+DL
Sbjct: 259  SFYNPLLPGVVEDLTKLGLLVEDNGAKCVFIEGFTNKEGEPLPLIVQKSDGGFNYATTDL 318

Query: 1430 AAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            AA+R RIE++ A+ ++YVTD    +   Q
Sbjct: 319  AALRYRIEKDGANRLIYVTDSGQANHFAQ 347


>gi|159116602|ref|XP_001708522.1| Arginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157436634|gb|EDO80848.1| Arginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 621

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/574 (42%), Positives = 348/574 (60%), Gaps = 25/574 (4%)

Query: 513  KFGDFQCNDAMALCKIFKD---KGEKKNPFDIAQSIAS---VVTSELATNPSLAKVIDKI 566
            K+G +Q N  M + K+ KD        NP +++         V  + A      K I+ +
Sbjct: 49   KYGHYQFNSTMGIAKLIKDLHYDALPSNPAELSGLFTQAMLCVQDKYAEEKGCPKPIEAV 108

Query: 567  EVAKPGFVNVFLSRVYAGEQIKDIIV-----NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
             +A   F+N+ L+  Y   +  DI +        +PPTL +K RV+VDFSSPN+AK MHV
Sbjct: 109  NIAG-CFINIALTPAYLLSKCFDIYMAVPFGTLPKPPTLPRK-RVVVDFSSPNVAKSMHV 166

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----- 676
            GHLRSTIIGD+I RL EY+G+DV R+NHVGDWGTQFGMLI HL D  P+    +      
Sbjct: 167  GHLRSTIIGDSICRLYEYVGYDVHRINHVGDWGTQFGMLITHLTDMHPEIADAAAHCRRI 226

Query: 677  ---PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQK 733
               PI +L AFYK +K+RFD D  F+KRAY+ VV LQR +      W  ICD+SR +FQ+
Sbjct: 227  TMLPIDNLVAFYKAAKERFDNDPAFQKRAYEAVVKLQRLNLAEFYLWCKICDISRHEFQR 286

Query: 734  IYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDG 793
            IYDRL++ + E GES Y+  +   V  L++  L ++ D   ++  E     P+ IVKSDG
Sbjct: 287  IYDRLDIKIDEFGESSYKFKLGTTVARLKRLHLTQMSDKATVIPIEGM-DYPLIIVKSDG 345

Query: 794  GFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
            GFTYDT+D+AAI  R +   AD  VYV D GQ  HF L+ + A+KAG +   K +   V 
Sbjct: 346  GFTYDTTDMAAIYHRTQVLHADKCVYVVDAGQSSHFDLVFKAAEKAGWIT--KDQAVHVP 403

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAY 913
            FGVVLG D K+ KTR+G+TVKL +LLDE +  S+  L+++NR  E +  E+ +  +AV Y
Sbjct: 404  FGVVLGSDGKRLKTRAGETVKLEDLLDEAVTESMRLLEERNRDQEFSQEEMRQVAEAVGY 463

Query: 914  GCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQ 973
            G +KYADLS +R  DY +   +ML+ +GNTA YLLY++TRI+SI R AGI+ E+L  +  
Sbjct: 464  GAVKYADLSSHRIKDYKYDPKRMLNLKGNTAAYLLYSFTRISSICRKAGIDREELYTSDT 523

Query: 974  STPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK 1033
               +S+    E  L   LL++ D ++    DLC H +C+++Y +++A+++FY+ C  IE 
Sbjct: 524  LRNLSITEPSEINLLVALLKVRDTILFTLEDLCPHRICDWVYSVASAYTDFYEKCRVIET 583

Query: 1034 DAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
             A G     +  RL+L E   + ++  F +L IR
Sbjct: 584  SASGD-SVCNKSRLVLCEMARQSLRLAFHLLGIR 616



 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 196/329 (59%), Gaps = 22/329 (6%)

Query: 123 KFGDFQCNDAMALCKIFKD---KGEKKNPFDIAQSIAS---VVTSELATNPSLAKVIDKI 176
           K+G +Q N  M + K+ KD        NP +++         V  + A      K I+ +
Sbjct: 49  KYGHYQFNSTMGIAKLIKDLHYDALPSNPAELSGLFTQAMLCVQDKYAEEKGCPKPIEAV 108

Query: 177 EVAKPGFVNVFLSRVYAGEQIKDIIV-----NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
            +A   F+N+ L+  Y   +  DI +        +PPTL +K RV+VDFSSPN+AK MHV
Sbjct: 109 NIAG-CFINIALTPAYLLSKCFDIYMAVPFGTLPKPPTLPRK-RVVVDFSSPNVAKSMHV 166

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----- 286
           GHLRSTIIGD+I RL EY+G+DV R+NHVGDWGTQFGMLI HL D  P+    +      
Sbjct: 167 GHLRSTIIGDSICRLYEYVGYDVHRINHVGDWGTQFGMLITHLTDMHPEIADAAAHCRRI 226

Query: 287 ---PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQK 343
              PI +L AFYK +K+RFD D  F+KRAY+ VV LQR +      W  ICD+SR +FQ+
Sbjct: 227 TMLPIDNLVAFYKAAKERFDNDPAFQKRAYEAVVKLQRLNLAEFYLWCKICDISRHEFQR 286

Query: 344 IYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDG 403
           IYDRL++ + E GES Y+  +   V  L++  L ++ D   ++  E     P+ IVKSDG
Sbjct: 287 IYDRLDIKIDEFGESSYKFKLGTTVARLKRLHLTQMSDKATVIPIEGM-DYPLIIVKSDG 345

Query: 404 GFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           GFTYDT+D+AAI  R +   AD  VYV D
Sbjct: 346 GFTYDTTDMAAIYHRTQVLHADKCVYVVD 374



 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 196/329 (59%), Gaps = 22/329 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKD---KGEKKNPFDIAQSIAS---VVTSELATNPSLAKVIDKI 1193
            K+G +Q N  M + K+ KD        NP +++         V  + A      K I+ +
Sbjct: 49   KYGHYQFNSTMGIAKLIKDLHYDALPSNPAELSGLFTQAMLCVQDKYAEEKGCPKPIEAV 108

Query: 1194 EVAKPGFVNVFLSRVYAGEQIKDIIV-----NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
             +A   F+N+ L+  Y   +  DI +        +PPTL +K RV+VDFSSPN+AK MHV
Sbjct: 109  NIAG-CFINIALTPAYLLSKCFDIYMAVPFGTLPKPPTLPRK-RVVVDFSSPNVAKSMHV 166

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----- 1303
            GHLRSTIIGD+I RL EY+G+DV R+NHVGDWGTQFGMLI HL D  P+    +      
Sbjct: 167  GHLRSTIIGDSICRLYEYVGYDVHRINHVGDWGTQFGMLITHLTDMHPEIADAAAHCRRI 226

Query: 1304 ---PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQK 1360
               PI +L AFYK +K+RFD D  F+KRAY+ VV LQR +      W  ICD+SR +FQ+
Sbjct: 227  TMLPIDNLVAFYKAAKERFDNDPAFQKRAYEAVVKLQRLNLAEFYLWCKICDISRHEFQR 286

Query: 1361 IYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDG 1420
            IYDRL++ + E GES Y+  +   V  L++  L ++ D   ++  E     P+ IVKSDG
Sbjct: 287  IYDRLDIKIDEFGESSYKFKLGTTVARLKRLHLTQMSDKATVIPIEGM-DYPLIIVKSDG 345

Query: 1421 GFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            GFTYDT+D+AAI  R +   AD  VYV D
Sbjct: 346  GFTYDTTDMAAIYHRTQVLHADKCVYVVD 374


>gi|434400255|ref|YP_007134259.1| arginyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
 gi|428271352|gb|AFZ37293.1| arginyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
          Length = 585

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/582 (43%), Positives = 366/582 (62%), Gaps = 43/582 (7%)

Query: 498  DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNP 557
            D   +VAS       KFGD+Q N A+ L K  K            ++IA  + ++L  + 
Sbjct: 28   DPLVAVASN-----PKFGDYQSNVALPLAKQLKLA---------PRAIAEKIIAKLEVD- 72

Query: 558  SLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQP-PTLNKKLRVLVDFSSP 613
               ++  K E+A  GF+N  +   Y   Q+  I  +   G++P P+  K   V+VDFSSP
Sbjct: 73   ---QICQKPEIAGAGFINFTIKPDYLVTQLSLIQADQRLGIEPVPSPQK---VIVDFSSP 126

Query: 614  NIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLT 673
            NIAKEMHVGHLRSTIIGD I+ +LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT
Sbjct: 127  NIAKEMHVGHLRSTIIGDAIANVLEFRGHDVLRLNHVGDWGTQFGMLIAYLKEAYPEALT 186

Query: 674  KSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDF 731
             +    + DL + YK++K RFD+DE FK+ A   VV LQ  + + + AW+++C+ SRR+F
Sbjct: 187  TADVLDLGDLVSLYKKAKIRFDQDEEFKETARNEVVKLQAGNSESRHAWQLLCEQSRREF 246

Query: 732  QKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPM 786
            Q IYD L++ +TERGESFY   +  +V  L+++GLL+ D G K ++ E   +     +P+
Sbjct: 247  QVIYDLLDIKITERGESFYNPFLADIVAELDQQGLLQEDAGAKCIFLEGFTNKAGEPLPL 306

Query: 787  TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNK 846
             + KSDGG+ Y T+DLAA++ RIE++ A+ I+YVTD+GQ  HF  + + AKKAGIL P K
Sbjct: 307  IVQKSDGGYNYATTDLAALKYRIEQDNAERIIYVTDVGQSNHFAAVFQVAKKAGIL-PEK 365

Query: 847  TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--L 904
              +  V FG+VLGED KK KTRSG+T+KL ELLDE + ++ + L+ + +      TE  +
Sbjct: 366  VEVVHVPFGLVLGEDGKKLKTRSGETIKLKELLDEAIIQARNDLESRLQEEGREETEEFI 425

Query: 905  SEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGIN 964
            ++  Q V    +KYADLS NR  DY FS+ KML  +GNTA YLLYAY R+  I+R   I+
Sbjct: 426  NQVAQTVGISAVKYADLSQNRTTDYKFSYSKMLALQGNTAPYLLYAYVRVQGISRKGEID 485

Query: 965  SEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEF 1024
             E L      T + L    E  LAK +L++ +++  V R+L  + LC Y+Y++S  F++F
Sbjct: 486  FEKL---GTHTKIVLAESTELILAKHILQLGEIIQEVERELLPNRLCLYIYELSQKFNQF 542

Query: 1025 YDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            Y++C  ++ +   +     T RL+LA+ TA+ +K    +L I
Sbjct: 543  YESCPILQVEEPSR-----TSRLILADLTARTIKLGLSLLGI 579



 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 157/357 (43%), Positives = 227/357 (63%), Gaps = 35/357 (9%)

Query: 108 DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNP 167
           D   +VAS       KFGD+Q N A+ L K  K            ++IA  + ++L  + 
Sbjct: 28  DPLVAVASN-----PKFGDYQSNVALPLAKQLKLA---------PRAIAEKIIAKLEVD- 72

Query: 168 SLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQP-PTLNKKLRVLVDFSSP 223
              ++  K E+A  GF+N  +   Y   Q+  I  +   G++P P+  K   V+VDFSSP
Sbjct: 73  ---QICQKPEIAGAGFINFTIKPDYLVTQLSLIQADQRLGIEPVPSPQK---VIVDFSSP 126

Query: 224 NIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLT 283
           NIAKEMHVGHLRSTIIGD I+ +LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT
Sbjct: 127 NIAKEMHVGHLRSTIIGDAIANVLEFRGHDVLRLNHVGDWGTQFGMLIAYLKEAYPEALT 186

Query: 284 KSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDF 341
            +    + DL + YK++K RFD+DE FK+ A   VV LQ  + + + AW+++C+ SRR+F
Sbjct: 187 TADVLDLGDLVSLYKKAKIRFDQDEEFKETARNEVVKLQAGNSESRHAWQLLCEQSRREF 246

Query: 342 QKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPM 396
           Q IYD L++ +TERGESFY   +  +V  L+++GLL+ D G K ++ E   +     +P+
Sbjct: 247 QVIYDLLDIKITERGESFYNPFLADIVAELDQQGLLQEDAGAKCIFLEGFTNKAGEPLPL 306

Query: 397 TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-HRSYHQVLQAIAEEEKKQGI 452
            + KSDGG+ Y T+DLAA++ RIE++ A+ I+YVTD  +S H    A+ +  KK GI
Sbjct: 307 IVQKSDGGYNYATTDLAALKYRIEQDNAERIIYVTDVGQSNH--FAAVFQVAKKAGI 361



 Score =  272 bits (696), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 150/336 (44%), Positives = 217/336 (64%), Gaps = 32/336 (9%)

Query: 1125 DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNP 1184
            D   +VAS       KFGD+Q N A+ L K  K            ++IA  + ++L  + 
Sbjct: 28   DPLVAVASN-----PKFGDYQSNVALPLAKQLKLA---------PRAIAEKIIAKLEVD- 72

Query: 1185 SLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQP-PTLNKKLRVLVDFSSP 1240
               ++  K E+A  GF+N  +   Y   Q+  I  +   G++P P+  K   V+VDFSSP
Sbjct: 73   ---QICQKPEIAGAGFINFTIKPDYLVTQLSLIQADQRLGIEPVPSPQK---VIVDFSSP 126

Query: 1241 NIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLT 1300
            NIAKEMHVGHLRSTIIGD I+ +LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT
Sbjct: 127  NIAKEMHVGHLRSTIIGDAIANVLEFRGHDVLRLNHVGDWGTQFGMLIAYLKEAYPEALT 186

Query: 1301 KSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDF 1358
             +    + DL + YK++K RFD+DE FK+ A   VV LQ  + + + AW+++C+ SRR+F
Sbjct: 187  TADVLDLGDLVSLYKKAKIRFDQDEEFKETARNEVVKLQAGNSESRHAWQLLCEQSRREF 246

Query: 1359 QKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPM 1413
            Q IYD L++ +TERGESFY   +  +V  L+++GLL+ D G K ++ E   +     +P+
Sbjct: 247  QVIYDLLDIKITERGESFYNPFLADIVAELDQQGLLQEDAGAKCIFLEGFTNKAGEPLPL 306

Query: 1414 TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             + KSDGG+ Y T+DLAA++ RIE++ A+ I+YVTD
Sbjct: 307  IVQKSDGGYNYATTDLAALKYRIEQDNAERIIYVTD 342


>gi|428774504|ref|YP_007166292.1| arginyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
 gi|428688783|gb|AFZ48643.1| arginyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
          Length = 582

 Score =  445 bits (1144), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/607 (42%), Positives = 370/607 (60%), Gaps = 52/607 (8%)

Query: 479  DYLSDVFTHAVQVAFPELGDKT----ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            D L  +F  A++  F    D T      V +TN +    FGD+QCN A+ L K  KD   
Sbjct: 3    DTLRQIFATALKQTFG--NDVTFVEPLVVPATNPR----FGDYQCNVALPLAKQLKD--- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------K 588
              NP  IAQ I          N +L +    +E+A PGF+N+ +   Y  +QI      +
Sbjct: 54   --NPRAIAQRIVD--------NINLDEFCQPLEIAGPGFINITIKPEYIAQQITTAHQDE 103

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + V  + P       + ++DFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLN
Sbjct: 104  RLGVTAITPEG-----KTVIDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHNVLRLN 158

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA--DLQAFYKESKKRFDEDEIFKKRAYQCV 706
            HVGDWGTQFGMLIA L+ + P+ LT +  +A  DL   YK++K +FD+D  FK+ A Q V
Sbjct: 159  HVGDWGTQFGMLIAFLRQEKPEVLTTANAVAIGDLVTLYKQAKSKFDQDPEFKEEARQEV 218

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ  D +  KAW+++C+ SR++FQ IYD L++ LTERGESFY   +  ++  LE++ L
Sbjct: 219  VKLQSKDSESIKAWQLLCEQSRKEFQIIYDLLDIELTERGESFYNPFLPAIINLLEEENL 278

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
            L  D G K ++      +    +P+ + KSDGG+ Y T+DLA ++ RIEE+KA  I+YVT
Sbjct: 279  LVEDQGAKCVFLDNFVNKQGDPLPLIVQKSDGGYNYATTDLACLKYRIEEDKATKIIYVT 338

Query: 822  DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
            D GQ  HF  + + A+KA I+ P    +  V FG+VL ED KK KTRSG+T++L +LLDE
Sbjct: 339  DAGQSNHFTQVFQVAQKANIV-PENVELVHVPFGLVLAEDGKKIKTRSGETIRLKDLLDE 397

Query: 882  GLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDD 939
             + R+   L+++         E  ++   Q V    +KYADLS NR  DY FSFDKML  
Sbjct: 398  AINRAKKDLENRLESEGRNEDESFINHVSQVVGLSAVKYADLSQNRTTDYKFSFDKMLAL 457

Query: 940  RGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLM 999
            +GNTA YLLYAY R+  I+R   I+ ++L +   +  + ++ E E  LAK LL+++ V+ 
Sbjct: 458  QGNTAPYLLYAYVRVQGISRKGNIDLDNLEI---NKSIIIKEESELVLAKHLLQLDYVIK 514

Query: 1000 LVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
             V +DL  + LC YL+++S  F++FYD C  ++ + + K+      RL+LA+ TAKV+K 
Sbjct: 515  EVEKDLLPNRLCLYLFELSQKFNQFYDQCPILQAEEDVKL-----SRLILADLTAKVIKL 569

Query: 1060 CFDILNI 1066
               +L I
Sbjct: 570  GLSLLGI 576



 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 162/374 (43%), Positives = 226/374 (60%), Gaps = 44/374 (11%)

Query: 89  DYLSDVFTHAVQVAFPELGDKT----ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           D L  +F  A++  F    D T      V +TN +    FGD+QCN A+ L K  KD   
Sbjct: 3   DTLRQIFATALKQTFG--NDVTFVEPLVVPATNPR----FGDYQCNVALPLAKQLKD--- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------K 198
             NP  IAQ I          N +L +    +E+A PGF+N+ +   Y  +QI      +
Sbjct: 54  --NPRAIAQRIVD--------NINLDEFCQPLEIAGPGFINITIKPEYIAQQITTAHQDE 103

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + V  + P       + ++DFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLN
Sbjct: 104 RLGVTAITPEG-----KTVIDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHNVLRLN 158

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA--DLQAFYKESKKRFDEDEIFKKRAYQCV 316
           HVGDWGTQFGMLIA L+ + P+ LT +  +A  DL   YK++K +FD+D  FK+ A Q V
Sbjct: 159 HVGDWGTQFGMLIAFLRQEKPEVLTTANAVAIGDLVTLYKQAKSKFDQDPEFKEEARQEV 218

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ  D +  KAW+++C+ SR++FQ IYD L++ LTERGESFY   +  ++  LE++ L
Sbjct: 219 VKLQSKDSESIKAWQLLCEQSRKEFQIIYDLLDIELTERGESFYNPFLPAIINLLEEENL 278

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
           L  D G K ++      +    +P+ + KSDGG+ Y T+DLA ++ RIEE+KA  I+YVT
Sbjct: 279 LVEDQGAKCVFLDNFVNKQGDPLPLIVQKSDGGYNYATTDLACLKYRIEEDKATKIIYVT 338

Query: 432 D---HRSYHQVLQA 442
           D      + QV Q 
Sbjct: 339 DAGQSNHFTQVFQV 352



 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 162/373 (43%), Positives = 226/373 (60%), Gaps = 44/373 (11%)

Query: 1106 DYLSDVFTHAVQVAFPELGDKT----ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            D L  +F  A++  F    D T      V +TN +    FGD+QCN A+ L K  KD   
Sbjct: 3    DTLRQIFATALKQTFG--NDVTFVEPLVVPATNPR----FGDYQCNVALPLAKQLKD--- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------K 1215
              NP  IAQ I          N +L +    +E+A PGF+N+ +   Y  +QI      +
Sbjct: 54   --NPRAIAQRIVD--------NINLDEFCQPLEIAGPGFINITIKPEYIAQQITTAHQDE 103

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + V  + P       + ++DFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLN
Sbjct: 104  RLGVTAITPEG-----KTVIDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHNVLRLN 158

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA--DLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            HVGDWGTQFGMLIA L+ + P+ LT +  +A  DL   YK++K +FD+D  FK+ A Q V
Sbjct: 159  HVGDWGTQFGMLIAFLRQEKPEVLTTANAVAIGDLVTLYKQAKSKFDQDPEFKEEARQEV 218

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ  D +  KAW+++C+ SR++FQ IYD L++ LTERGESFY   +  ++  LE++ L
Sbjct: 219  VKLQSKDSESIKAWQLLCEQSRKEFQIIYDLLDIELTERGESFYNPFLPAIINLLEEENL 278

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
            L  D G K ++      +    +P+ + KSDGG+ Y T+DLA ++ RIEE+KA  I+YVT
Sbjct: 279  LVEDQGAKCVFLDNFVNKQGDPLPLIVQKSDGGYNYATTDLACLKYRIEEDKATKIIYVT 338

Query: 1449 D---HRSYHQVLQ 1458
            D      + QV Q
Sbjct: 339  DAGQSNHFTQVFQ 351


>gi|158337656|ref|YP_001518831.1| arginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158307897|gb|ABW29514.1| arginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 584

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/606 (42%), Positives = 368/606 (60%), Gaps = 45/606 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+   L   F  A+  AF    +   SV         KFGD+Q N ++AL K        
Sbjct: 3    SILKTLETRFDRALNAAFG--AELVISVPVVGVASNPKFGDYQSNVSLALAKPLG----- 55

Query: 536  KNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
            ++P  IA Q +  +   +L   P+         +A PGF+N+ L   +  EQ++ +  + 
Sbjct: 56   QSPRGIADQILQHLEVDDLCEPPT---------IAGPGFINLTLKPTFLAEQLQQMQADP 106

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G++P  +    RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ G+DV+RLNHVG
Sbjct: 107  RLGIEP--IADPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGNDVLRLNHVG 164

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            DWGTQFGMLI +L +  P  LT S    + DL AFYK++K+RFDEDE F+ ++   VV L
Sbjct: 165  DWGTQFGMLITYLSEVHPAALTTSDALDLGDLVAFYKKAKQRFDEDEDFQVQSRNAVVKL 224

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q+ D +  +AW+++CD SRR+F+KIY  L++ LTERGESFY   +  ++  L+K GLLE 
Sbjct: 225  QQGDSEATQAWQLLCDQSRREFEKIYRDLDIELTERGESFYNPFLADVLTDLDKAGLLET 284

Query: 770  DDGRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLG 824
            D G + ++ E     +G   P+ + KSDGGF Y T+DLAA+R RI  E A  ++Y+TD G
Sbjct: 285  DQGAQCVFLEGFTNKQGDPQPLIVQKSDGGFNYATTDLAALRHRITAESAQRLIYITDAG 344

Query: 825  QGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
            Q  HF  + + A++A  + P   ++  + FG+V GED KK KTRSG T++L +LLDE + 
Sbjct: 345  QANHFAQVFQVARRAQWM-PETIQVVHMPFGLVQGEDGKKLKTRSGKTIRLRDLLDEAVT 403

Query: 885  RSL----DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            R+      +L +++R TE +P  ++ A Q +  G +KYADLS NR  +YVFS+DKML  +
Sbjct: 404  RAQTDIETRLAEEDR-TE-SPDFIANAAQVIGLGAVKYADLSQNRTSNYVFSYDKMLALQ 461

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+LYAY R+  I+R   I+   L        + +    E ALAK LL+M D+L  
Sbjct: 462  GNTAPYMLYAYVRVQGISRKGKIDFSQL----DDVSLIIAEPSELALAKHLLQMQDILSE 517

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V  DL  + LC+YL+++S  F++FYD C  +  +   +     T RL+L++ TA+ +K  
Sbjct: 518  VAADLLPNRLCQYLFELSQKFNQFYDQCPVLNAEEPAR-----TSRLVLSDLTARTLKLG 572

Query: 1061 FDILNI 1066
              +L I
Sbjct: 573  LSLLGI 578



 Score =  280 bits (715), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 161/370 (43%), Positives = 225/370 (60%), Gaps = 32/370 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           S+   L   F  A+  AF    +   SV         KFGD+Q N ++AL K        
Sbjct: 3   SILKTLETRFDRALNAAFG--AELVISVPVVGVASNPKFGDYQSNVSLALAKPLG----- 55

Query: 146 KNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
           ++P  IA Q +  +   +L   P+         +A PGF+N+ L   +  EQ++ +  + 
Sbjct: 56  QSPRGIADQILQHLEVDDLCEPPT---------IAGPGFINLTLKPTFLAEQLQQMQADP 106

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G++P  +    RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ G+DV+RLNHVG
Sbjct: 107 RLGIEP--IADPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGNDVLRLNHVG 164

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           DWGTQFGMLI +L +  P  LT S    + DL AFYK++K+RFDEDE F+ ++   VV L
Sbjct: 165 DWGTQFGMLITYLSEVHPAALTTSDALDLGDLVAFYKKAKQRFDEDEDFQVQSRNAVVKL 224

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 379
           Q+ D +  +AW+++CD SRR+F+KIY  L++ LTERGESFY   +  ++  L+K GLLE 
Sbjct: 225 QQGDSEATQAWQLLCDQSRREFEKIYRDLDIELTERGESFYNPFLADVLTDLDKAGLLET 284

Query: 380 DDGRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-- 432
           D G + ++ E     +G   P+ + KSDGGF Y T+DLAA+R RI  E A  ++Y+TD  
Sbjct: 285 DQGAQCVFLEGFTNKQGDPQPLIVQKSDGGFNYATTDLAALRHRITAESAQRLIYITDAG 344

Query: 433 -HRSYHQVLQ 441
               + QV Q
Sbjct: 345 QANHFAQVFQ 354



 Score =  280 bits (715), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 161/370 (43%), Positives = 225/370 (60%), Gaps = 32/370 (8%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+   L   F  A+  AF    +   SV         KFGD+Q N ++AL K        
Sbjct: 3    SILKTLETRFDRALNAAFG--AELVISVPVVGVASNPKFGDYQSNVSLALAKPLG----- 55

Query: 1163 KNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
            ++P  IA Q +  +   +L   P+         +A PGF+N+ L   +  EQ++ +  + 
Sbjct: 56   QSPRGIADQILQHLEVDDLCEPPT---------IAGPGFINLTLKPTFLAEQLQQMQADP 106

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G++P  +    RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ G+DV+RLNHVG
Sbjct: 107  RLGIEP--IADPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGNDVLRLNHVG 164

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            DWGTQFGMLI +L +  P  LT S    + DL AFYK++K+RFDEDE F+ ++   VV L
Sbjct: 165  DWGTQFGMLITYLSEVHPAALTTSDALDLGDLVAFYKKAKQRFDEDEDFQVQSRNAVVKL 224

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q+ D +  +AW+++CD SRR+F+KIY  L++ LTERGESFY   +  ++  L+K GLLE 
Sbjct: 225  QQGDSEATQAWQLLCDQSRREFEKIYRDLDIELTERGESFYNPFLADVLTDLDKAGLLET 284

Query: 1397 DDGRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-- 1449
            D G + ++ E     +G   P+ + KSDGGF Y T+DLAA+R RI  E A  ++Y+TD  
Sbjct: 285  DQGAQCVFLEGFTNKQGDPQPLIVQKSDGGFNYATTDLAALRHRITAESAQRLIYITDAG 344

Query: 1450 -HRSYHQVLQ 1458
                + QV Q
Sbjct: 345  QANHFAQVFQ 354


>gi|428181222|gb|EKX50087.1| Arginyl-tRNA synthetase [Guillardia theta CCMP2712]
          Length = 695

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 262/607 (43%), Positives = 372/607 (61%), Gaps = 42/607 (6%)

Query: 477  VRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            V+ +L    T A+  AF  E+ D    VA  ++    +FGD+QCN AM+L K    K   
Sbjct: 112  VQQWLERKVTQALCEAFGEEVKDVNPMVAIASKP---EFGDYQCNVAMSLSKKVGMK--- 165

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
              P D+A  +   +      +P L  V ++ E+A PGF+N+ L + Y G +I  +  +G 
Sbjct: 166  --PRDVADKLLQRL------HPLLQDVFEQPEIAGPGFLNLRLRKDYIGGRISRMTEDGE 217

Query: 596  Q---PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            +   P T N K RV+VDFSSPNIAKEMHVGHLRSTIIGDT+ RL E+LGHDV+RLNHVGD
Sbjct: 218  RLGIPKTGNPK-RVIVDFSSPNIAKEMHVGHLRSTIIGDTLCRLEEFLGHDVLRLNHVGD 276

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQA-----FYKESKKRFDEDEIFKKRAYQCVV 707
            WGTQFGMLI +L++K     T    + DLQ      FYK++K RFDEDE F+  + + VV
Sbjct: 277  WGTQFGMLITYLREK---GFTAEKGLGDLQIGDLVNFYKQAKARFDEDEAFQTASRKEVV 333

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
            ALQ  D      W ++C+ SR++FQ +YD LNV L ERGESFY   +  ++  L++  LL
Sbjct: 334  ALQAGDATSLSGWSILCEASRKEFQVVYDMLNVRLEERGESFYNNMLSDVISGLKEIELL 393

Query: 768  ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
            +  +G ++++      +D   +P  + KSDGG+ Y T+DLAAIR R+++EKAD I+YVTD
Sbjct: 394  KESEGARVVYVDGYKNKDGDPMPFLVQKSDGGYLYSTTDLAAIRHRVQKEKADRILYVTD 453

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQ  HF      A++AG + P+   ++ V FG+V GED KKFKTRSGDTVKL +LLDE 
Sbjct: 454  AGQSTHFDQARCIARQAGWV-PSHVSLEHVPFGLVQGEDGKKFKTRSGDTVKLRDLLDEA 512

Query: 883  LRRSLDKLKDKNRHTELTPTELSE-AQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
            + R+   L+++        TE +E   + V    +KYADLS NR  +Y FS+DKML   G
Sbjct: 513  IVRASKDLRERLEADNKPFTEETERTARIVGLAAVKYADLSMNRESNYRFSYDKMLALSG 572

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
            NTA Y+LYA+ RI  I R  G    ++++ + S  + L+H  E  LA+ L+ + ++L+ V
Sbjct: 573  NTAPYMLYAFARINGIRRKIG---SEIKLDS-SCKIILDHPAEMFLARHLVYLPELLLDV 628

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
             + L  H LCEY++++S  F++FY+NC      +E + K+    RL L  ATA  ++   
Sbjct: 629  EKSLYPHRLCEYIFELSQRFNQFYENCPVANAPSEEEKKS----RLALCSATANTLQLVL 684

Query: 1062 DILNIRT 1068
            ++L I T
Sbjct: 685  NLLGIDT 691



 Score =  285 bits (730), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/360 (45%), Positives = 226/360 (62%), Gaps = 32/360 (8%)

Query: 87  VRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           V+ +L    T A+  AF  E+ D    VA  ++    +FGD+QCN AM+L K    K   
Sbjct: 112 VQQWLERKVTQALCEAFGEEVKDVNPMVAIASKP---EFGDYQCNVAMSLSKKVGMK--- 165

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
             P D+A  +   +      +P L  V ++ E+A PGF+N+ L + Y G +I  +  +G 
Sbjct: 166 --PRDVADKLLQRL------HPLLQDVFEQPEIAGPGFLNLRLRKDYIGGRISRMTEDGE 217

Query: 206 Q---PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           +   P T N K RV+VDFSSPNIAKEMHVGHLRSTIIGDT+ RL E+LGHDV+RLNHVGD
Sbjct: 218 RLGIPKTGNPK-RVIVDFSSPNIAKEMHVGHLRSTIIGDTLCRLEEFLGHDVLRLNHVGD 276

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQA-----FYKESKKRFDEDEIFKKRAYQCVV 317
           WGTQFGMLI +L++K     T    + DLQ      FYK++K RFDEDE F+  + + VV
Sbjct: 277 WGTQFGMLITYLREK---GFTAEKGLGDLQIGDLVNFYKQAKARFDEDEAFQTASRKEVV 333

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 377
           ALQ  D      W ++C+ SR++FQ +YD LNV L ERGESFY   +  ++  L++  LL
Sbjct: 334 ALQAGDATSLSGWSILCEASRKEFQVVYDMLNVRLEERGESFYNNMLSDVISGLKEIELL 393

Query: 378 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +  +G ++++      +D   +P  + KSDGG+ Y T+DLAAIR R+++EKAD I+YVTD
Sbjct: 394 KESEGARVVYVDGYKNKDGDPMPFLVQKSDGGYLYSTTDLAAIRHRVQKEKADRILYVTD 453



 Score =  285 bits (730), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/360 (45%), Positives = 226/360 (62%), Gaps = 32/360 (8%)

Query: 1104 VRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            V+ +L    T A+  AF  E+ D    VA  ++    +FGD+QCN AM+L K    K   
Sbjct: 112  VQQWLERKVTQALCEAFGEEVKDVNPMVAIASKP---EFGDYQCNVAMSLSKKVGMK--- 165

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
              P D+A  +   +      +P L  V ++ E+A PGF+N+ L + Y G +I  +  +G 
Sbjct: 166  --PRDVADKLLQRL------HPLLQDVFEQPEIAGPGFLNLRLRKDYIGGRISRMTEDGE 217

Query: 1223 Q---PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            +   P T N K RV+VDFSSPNIAKEMHVGHLRSTIIGDT+ RL E+LGHDV+RLNHVGD
Sbjct: 218  RLGIPKTGNPK-RVIVDFSSPNIAKEMHVGHLRSTIIGDTLCRLEEFLGHDVLRLNHVGD 276

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQA-----FYKESKKRFDEDEIFKKRAYQCVV 1334
            WGTQFGMLI +L++K     T    + DLQ      FYK++K RFDEDE F+  + + VV
Sbjct: 277  WGTQFGMLITYLREK---GFTAEKGLGDLQIGDLVNFYKQAKARFDEDEAFQTASRKEVV 333

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
            ALQ  D      W ++C+ SR++FQ +YD LNV L ERGESFY   +  ++  L++  LL
Sbjct: 334  ALQAGDATSLSGWSILCEASRKEFQVVYDMLNVRLEERGESFYNNMLSDVISGLKEIELL 393

Query: 1395 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +  +G ++++      +D   +P  + KSDGG+ Y T+DLAAIR R+++EKAD I+YVTD
Sbjct: 394  KESEGARVVYVDGYKNKDGDPMPFLVQKSDGGYLYSTTDLAAIRHRVQKEKADRILYVTD 453


>gi|253742171|gb|EES99018.1| Arginyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 621

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/575 (42%), Positives = 353/575 (61%), Gaps = 27/575 (4%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSEL-------ATNPSLAKVIDK 565
            K+G +Q N  M + KI KD    + P + A+ ++ ++T E+              K I+ 
Sbjct: 49   KYGHYQLNSTMGIAKIIKDLHYTELPSNPAE-LSGLITQEILRVQDEYTKVKGCPKPIEA 107

Query: 566  IEVAKPGFVNVFLSRVYAGEQIKDIIV-----NGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
            + +A   F+N+ L+  Y   +  DI +     +  +PP L KK R+ VDFSSPN+AK MH
Sbjct: 108  VNIAG-CFINLMLTPTYLLSKCFDIYMAVPFGSLPKPPVLPKK-RIAVDFSSPNVAKSMH 165

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP---- 676
            VGHLRSTIIGD+ISRL EY+G+DV R+NHVGDWGTQFGMLI +L D  P+    +     
Sbjct: 166  VGHLRSTIIGDSISRLYEYVGYDVHRINHVGDWGTQFGMLITYLTDMHPEIADAAAHCRR 225

Query: 677  ----PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 732
                PI +L AFYK++K+RFD D  F+KRAY+ VV LQ  + +    W  IC++SR +FQ
Sbjct: 226  VTMLPIDNLVAFYKKAKERFDTDADFQKRAYETVVKLQHLNLEEFYLWHKICEISRHEFQ 285

Query: 733  KIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSD 792
            +IYDRL++ + E GES+Y+  +   V  L++  L +L D   ++  E     P+ IVKSD
Sbjct: 286  RIYDRLDIKIDEFGESYYKFKLGTTVARLKRLHLTQLSDKATVIPVEGM-DYPLIIVKSD 344

Query: 793  GGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFV 852
            GGFTYDT+D+AAI  R +  +AD  VYV D GQ  HF L+   A+KAG +   K +   V
Sbjct: 345  GGFTYDTTDMAAIYHRTQVLRADKCVYVVDAGQSSHFELVFGAAEKAGWIT--KGQAVHV 402

Query: 853  GFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVA 912
             FGVVLG D K+ KTR+G+TVKL +LLDE +  S   L+++NR  E +  E+ +  +AV 
Sbjct: 403  PFGVVLGSDGKRLKTRAGETVKLEDLLDEAVAESTRLLEERNRDQEFSQEEVRQIVEAVG 462

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
            YG +KYADLS +R  DY +   +ML+ +GNTA YLLY++TRI+SI R AGIN E+L   +
Sbjct: 463  YGAVKYADLSSHRIKDYKYDPKRMLNLKGNTAAYLLYSFTRISSICRKAGINREELYTTS 522

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
                +S+    E  L   LL+++D ++    DLC H +C+++Y +++A+++FY+ C  IE
Sbjct: 523  LPKDLSIGDPSEINLLVALLKVHDTILFTLDDLCPHRICDWVYSVASAYTDFYEKCRVIE 582

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
                G     +  RL L E T + ++  F +L IR
Sbjct: 583  TSESGD-TVCNKSRLALCEMTRQSLRLAFHLLGIR 616



 Score =  259 bits (661), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 203/330 (61%), Gaps = 24/330 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSEL-------ATNPSLAKVIDK 175
           K+G +Q N  M + KI KD    + P + A+ ++ ++T E+              K I+ 
Sbjct: 49  KYGHYQLNSTMGIAKIIKDLHYTELPSNPAE-LSGLITQEILRVQDEYTKVKGCPKPIEA 107

Query: 176 IEVAKPGFVNVFLSRVYAGEQIKDIIV-----NGVQPPTLNKKLRVLVDFSSPNIAKEMH 230
           + +A   F+N+ L+  Y   +  DI +     +  +PP L KK R+ VDFSSPN+AK MH
Sbjct: 108 VNIAG-CFINLMLTPTYLLSKCFDIYMAVPFGSLPKPPVLPKK-RIAVDFSSPNVAKSMH 165

Query: 231 VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP---- 286
           VGHLRSTIIGD+ISRL EY+G+DV R+NHVGDWGTQFGMLI +L D  P+    +     
Sbjct: 166 VGHLRSTIIGDSISRLYEYVGYDVHRINHVGDWGTQFGMLITYLTDMHPEIADAAAHCRR 225

Query: 287 ----PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 342
               PI +L AFYK++K+RFD D  F+KRAY+ VV LQ  + +    W  IC++SR +FQ
Sbjct: 226 VTMLPIDNLVAFYKKAKERFDTDADFQKRAYETVVKLQHLNLEEFYLWHKICEISRHEFQ 285

Query: 343 KIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSD 402
           +IYDRL++ + E GES+Y+  +   V  L++  L +L D   ++  E     P+ IVKSD
Sbjct: 286 RIYDRLDIKIDEFGESYYKFKLGTTVARLKRLHLTQLSDKATVIPVEGM-DYPLIIVKSD 344

Query: 403 GGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           GGFTYDT+D+AAI  R +  +AD  VYV D
Sbjct: 345 GGFTYDTTDMAAIYHRTQVLRADKCVYVVD 374



 Score =  259 bits (661), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 203/330 (61%), Gaps = 24/330 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSEL-------ATNPSLAKVIDK 1192
            K+G +Q N  M + KI KD    + P + A+ ++ ++T E+              K I+ 
Sbjct: 49   KYGHYQLNSTMGIAKIIKDLHYTELPSNPAE-LSGLITQEILRVQDEYTKVKGCPKPIEA 107

Query: 1193 IEVAKPGFVNVFLSRVYAGEQIKDIIV-----NGVQPPTLNKKLRVLVDFSSPNIAKEMH 1247
            + +A   F+N+ L+  Y   +  DI +     +  +PP L KK R+ VDFSSPN+AK MH
Sbjct: 108  VNIAG-CFINLMLTPTYLLSKCFDIYMAVPFGSLPKPPVLPKK-RIAVDFSSPNVAKSMH 165

Query: 1248 VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP---- 1303
            VGHLRSTIIGD+ISRL EY+G+DV R+NHVGDWGTQFGMLI +L D  P+    +     
Sbjct: 166  VGHLRSTIIGDSISRLYEYVGYDVHRINHVGDWGTQFGMLITYLTDMHPEIADAAAHCRR 225

Query: 1304 ----PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 1359
                PI +L AFYK++K+RFD D  F+KRAY+ VV LQ  + +    W  IC++SR +FQ
Sbjct: 226  VTMLPIDNLVAFYKKAKERFDTDADFQKRAYETVVKLQHLNLEEFYLWHKICEISRHEFQ 285

Query: 1360 KIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSD 1419
            +IYDRL++ + E GES+Y+  +   V  L++  L +L D   ++  E     P+ IVKSD
Sbjct: 286  RIYDRLDIKIDEFGESYYKFKLGTTVARLKRLHLTQLSDKATVIPVEGM-DYPLIIVKSD 344

Query: 1420 GGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            GGFTYDT+D+AAI  R +  +AD  VYV D
Sbjct: 345  GGFTYDTTDMAAIYHRTQVLRADKCVYVVD 374


>gi|428181223|gb|EKX50088.1| hypothetical protein GUITHDRAFT_200394 [Guillardia theta CCMP2712]
          Length = 649

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 263/610 (43%), Positives = 373/610 (61%), Gaps = 52/610 (8%)

Query: 477  VRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            V+ +L    T A+  AF  E+ D    VA  ++    +FGD+QCN AM+L K    K   
Sbjct: 70   VQQWLERKVTQALCEAFGEEVKDVNPMVAIASKP---EFGDYQCNVAMSLSKKVGMK--- 123

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
              P D+A  +   +      +P L  V ++ E+A PGF+N+ L + Y G +I  +  +G 
Sbjct: 124  --PRDVADKLLQRL------HPLLQDVFEQPEIAGPGFLNLRLRKDYIGGRISRMTEDGE 175

Query: 596  Q---PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            +   P T N K RV+VDFSSPNIAKEMHVGHLRSTIIGDT+ RL E+LGHDV+RLNHVGD
Sbjct: 176  RLGIPKTGNPK-RVIVDFSSPNIAKEMHVGHLRSTIIGDTLCRLEEFLGHDVLRLNHVGD 234

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQA-----FYKESKKRFDEDEIFKKRAYQCVV 707
            WGTQFGMLI +L++K     T    + DLQ      FYK++K RFDEDE F+  + + VV
Sbjct: 235  WGTQFGMLITYLREK---GFTAEKGLGDLQIGDLVNFYKQAKARFDEDEAFQTASRKEVV 291

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
            ALQ  D      W ++C+ SR++FQ +YD LNV L ERGESFY   +  ++  L++  LL
Sbjct: 292  ALQAGDATSLSGWSILCEASRKEFQVVYDMLNVRLEERGESFYNNMLSDVISGLKEIELL 351

Query: 768  ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
            +  +G ++++      +D   +P  + KSDGG+ Y T+DLAAIR R+++EKAD I+YVTD
Sbjct: 352  KESEGARVVYVDGYKNKDGDPMPFLVQKSDGGYLYSTTDLAAIRHRVQKEKADRILYVTD 411

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQ  HF      A++AG + P+   ++ V FG+V GED KKFKTRSGDTVKL +LLDE 
Sbjct: 412  AGQSTHFDQARCIARQAGWV-PSHVSLEHVPFGLVQGEDGKKFKTRSGDTVKLRDLLDEA 470

Query: 883  LRRSLDKLKDK----NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            + R+   L+++    N+ TE T        + V    +KYADLS NR  +Y FS+DKML 
Sbjct: 471  IVRASKDLRERLEADNKETERTA-------RIVGLAAVKYADLSMNRESNYRFSYDKMLA 523

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
              GNTA Y+LYA+ RI  I R  G    ++++ + S  + L+H  E  LA+ L+ + ++L
Sbjct: 524  LSGNTAPYMLYAFARINGIRRKIG---SEIKLDS-SCKIILDHPAEMFLARHLVYLPELL 579

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
            + V + L  H LCEY++++S  F++FY+NC      +E + K+    RL L  ATA  ++
Sbjct: 580  LDVEKSLYPHRLCEYIFELSQRFNQFYENCPVANAPSEEEKKS----RLALCSATANTLQ 635

Query: 1059 KCFDILNIRT 1068
               ++L I T
Sbjct: 636  LVLNLLGIDT 645



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 164/360 (45%), Positives = 226/360 (62%), Gaps = 32/360 (8%)

Query: 87  VRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           V+ +L    T A+  AF  E+ D    VA  ++    +FGD+QCN AM+L K    K   
Sbjct: 70  VQQWLERKVTQALCEAFGEEVKDVNPMVAIASKP---EFGDYQCNVAMSLSKKVGMK--- 123

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
             P D+A  +   +      +P L  V ++ E+A PGF+N+ L + Y G +I  +  +G 
Sbjct: 124 --PRDVADKLLQRL------HPLLQDVFEQPEIAGPGFLNLRLRKDYIGGRISRMTEDGE 175

Query: 206 Q---PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           +   P T N K RV+VDFSSPNIAKEMHVGHLRSTIIGDT+ RL E+LGHDV+RLNHVGD
Sbjct: 176 RLGIPKTGNPK-RVIVDFSSPNIAKEMHVGHLRSTIIGDTLCRLEEFLGHDVLRLNHVGD 234

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQA-----FYKESKKRFDEDEIFKKRAYQCVV 317
           WGTQFGMLI +L++K     T    + DLQ      FYK++K RFDEDE F+  + + VV
Sbjct: 235 WGTQFGMLITYLREK---GFTAEKGLGDLQIGDLVNFYKQAKARFDEDEAFQTASRKEVV 291

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 377
           ALQ  D      W ++C+ SR++FQ +YD LNV L ERGESFY   +  ++  L++  LL
Sbjct: 292 ALQAGDATSLSGWSILCEASRKEFQVVYDMLNVRLEERGESFYNNMLSDVISGLKEIELL 351

Query: 378 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +  +G ++++      +D   +P  + KSDGG+ Y T+DLAAIR R+++EKAD I+YVTD
Sbjct: 352 KESEGARVVYVDGYKNKDGDPMPFLVQKSDGGYLYSTTDLAAIRHRVQKEKADRILYVTD 411



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 164/360 (45%), Positives = 226/360 (62%), Gaps = 32/360 (8%)

Query: 1104 VRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            V+ +L    T A+  AF  E+ D    VA  ++    +FGD+QCN AM+L K    K   
Sbjct: 70   VQQWLERKVTQALCEAFGEEVKDVNPMVAIASKP---EFGDYQCNVAMSLSKKVGMK--- 123

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
              P D+A  +   +      +P L  V ++ E+A PGF+N+ L + Y G +I  +  +G 
Sbjct: 124  --PRDVADKLLQRL------HPLLQDVFEQPEIAGPGFLNLRLRKDYIGGRISRMTEDGE 175

Query: 1223 Q---PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            +   P T N K RV+VDFSSPNIAKEMHVGHLRSTIIGDT+ RL E+LGHDV+RLNHVGD
Sbjct: 176  RLGIPKTGNPK-RVIVDFSSPNIAKEMHVGHLRSTIIGDTLCRLEEFLGHDVLRLNHVGD 234

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQA-----FYKESKKRFDEDEIFKKRAYQCVV 1334
            WGTQFGMLI +L++K     T    + DLQ      FYK++K RFDEDE F+  + + VV
Sbjct: 235  WGTQFGMLITYLREK---GFTAEKGLGDLQIGDLVNFYKQAKARFDEDEAFQTASRKEVV 291

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
            ALQ  D      W ++C+ SR++FQ +YD LNV L ERGESFY   +  ++  L++  LL
Sbjct: 292  ALQAGDATSLSGWSILCEASRKEFQVVYDMLNVRLEERGESFYNNMLSDVISGLKEIELL 351

Query: 1395 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +  +G ++++      +D   +P  + KSDGG+ Y T+DLAAIR R+++EKAD I+YVTD
Sbjct: 352  KESEGARVVYVDGYKNKDGDPMPFLVQKSDGGYLYSTTDLAAIRHRVQKEKADRILYVTD 411


>gi|357477051|ref|XP_003608811.1| Arginyl-tRNA synthetase [Medicago truncatula]
 gi|355509866|gb|AES91008.1| Arginyl-tRNA synthetase [Medicago truncatula]
          Length = 589

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/603 (41%), Positives = 368/603 (61%), Gaps = 41/603 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASV-ASTNEKYVHKFGDFQCNDAMALCKIFKDK-G 533
            SV+  L+++F  +++   P   D    V A    K   K  D+QCN+AM+L  I K+K  
Sbjct: 10   SVKKQLAELFRESLKATVPSEPDVVPLVEACVANKNGVKHADYQCNNAMSLFPIIKEKQP 69

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
            E +NP  + + IA         N   +++++   VA  G+VN+ LS+ +  + ++ ++ +
Sbjct: 70   EFRNPRSLGEGIAK--------NLPPSEMVESCFVAGSGYVNIVLSKKWIAQSLQKMLTS 121

Query: 594  GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD-VVRLNHV 650
            G+    P L  K R+LVDFSSPNIAKEMHVGHLRSTIIGDTI+R+LE+   + ++R NH+
Sbjct: 122  GIHSWAPRLPVK-RILVDFSSPNIAKEMHVGHLRSTIIGDTIARMLEFCQPECLIRRNHI 180

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFG++         D       I DLQ FYK SK ++D D  FK +A Q VV LQ
Sbjct: 181  GDWGTQFGIIRTGGNINECD-------IGDLQEFYKTSKSKYDSDPDFKTKARQSVVKLQ 233

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
            R DP Y++AW  IC+VSR ++ K+Y RL V L E+ ESFY  ++   +  LEK GL+E  
Sbjct: 234  RGDPKYREAWHKICEVSRAEYNKVYRRLGVHLEEKPESFYNPYIPPTLKKLEKLGLIEDS 293

Query: 771  DGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            DG ++++  G DR   P+   KSDGG+ Y ++DLA++  R+  EK DW +YVTD+GQ  H
Sbjct: 294  DGARVIFVEGVDR---PLIARKSDGGYNYFSTDLASLWYRLNIEKIDWNIYVTDVGQWQH 350

Query: 829  FRLLEECAKKAGILNPNKTR----MDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
            F +L +  ++AG   P           VGFG+V G+D K+F++RS +TV+L +LLDE   
Sbjct: 351  FDMLFKAFRRAGWWLPKDANEYPICTHVGFGLVCGDDGKRFRSRSSETVRLVDLLDEAKS 410

Query: 885  RSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
            R  D L +++     T  E+ +  +A+ YG +KYADL  NR+ +Y FSFD+ML+D+GNTA
Sbjct: 411  RCKDTLLERDNAKGWTEEEIDKTAEAIGYGAVKYADLKINRSTNYTFSFDQMLNDKGNTA 470

Query: 945  VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
            VYLLYA+ RI SI   +G + E+L+   ++  + L+H+ E  LA  LL+  +V +    +
Sbjct: 471  VYLLYAHARICSIIEKSGKDIEELK---KNGSLVLDHKDECTLALHLLQFTEVFVESCSN 527

Query: 1005 LCLHHLCEYLYDISTAFS-EFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            L  + LCEYLYD++  F+ +FY NC  +    E       T RLLL EAT  VM++CF +
Sbjct: 528  LLPNKLCEYLYDLAEIFTKKFYSNCQVVGSPEE-------TSRLLLCEATLTVMRQCFYL 580

Query: 1064 LNI 1066
            L I
Sbjct: 581  LGI 583



 Score =  264 bits (675), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/354 (42%), Positives = 217/354 (61%), Gaps = 26/354 (7%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASV-ASTNEKYVHKFGDFQCNDAMALCKIFKDK-G 143
           SV+  L+++F  +++   P   D    V A    K   K  D+QCN+AM+L  I K+K  
Sbjct: 10  SVKKQLAELFRESLKATVPSEPDVVPLVEACVANKNGVKHADYQCNNAMSLFPIIKEKQP 69

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
           E +NP  + + IA         N   +++++   VA  G+VN+ LS+ +  + ++ ++ +
Sbjct: 70  EFRNPRSLGEGIAK--------NLPPSEMVESCFVAGSGYVNIVLSKKWIAQSLQKMLTS 121

Query: 204 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD-VVRLNHV 260
           G+    P L  K R+LVDFSSPNIAKEMHVGHLRSTIIGDTI+R+LE+   + ++R NH+
Sbjct: 122 GIHSWAPRLPVK-RILVDFSSPNIAKEMHVGHLRSTIIGDTIARMLEFCQPECLIRRNHI 180

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFG++         D       I DLQ FYK SK ++D D  FK +A Q VV LQ
Sbjct: 181 GDWGTQFGIIRTGGNINECD-------IGDLQEFYKTSKSKYDSDPDFKTKARQSVVKLQ 233

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
           R DP Y++AW  IC+VSR ++ K+Y RL V L E+ ESFY  ++   +  LEK GL+E  
Sbjct: 234 RGDPKYREAWHKICEVSRAEYNKVYRRLGVHLEEKPESFYNPYIPPTLKKLEKLGLIEDS 293

Query: 381 DGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           DG ++++  G DR   P+   KSDGG+ Y ++DLA++  R+  EK DW +YVTD
Sbjct: 294 DGARVIFVEGVDR---PLIARKSDGGYNYFSTDLASLWYRLNIEKIDWNIYVTD 344



 Score =  264 bits (675), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/354 (42%), Positives = 217/354 (61%), Gaps = 26/354 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASV-ASTNEKYVHKFGDFQCNDAMALCKIFKDK-G 1160
            SV+  L+++F  +++   P   D    V A    K   K  D+QCN+AM+L  I K+K  
Sbjct: 10   SVKKQLAELFRESLKATVPSEPDVVPLVEACVANKNGVKHADYQCNNAMSLFPIIKEKQP 69

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
            E +NP  + + IA         N   +++++   VA  G+VN+ LS+ +  + ++ ++ +
Sbjct: 70   EFRNPRSLGEGIAK--------NLPPSEMVESCFVAGSGYVNIVLSKKWIAQSLQKMLTS 121

Query: 1221 GVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD-VVRLNHV 1277
            G+    P L  K R+LVDFSSPNIAKEMHVGHLRSTIIGDTI+R+LE+   + ++R NH+
Sbjct: 122  GIHSWAPRLPVK-RILVDFSSPNIAKEMHVGHLRSTIIGDTIARMLEFCQPECLIRRNHI 180

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFG++         D       I DLQ FYK SK ++D D  FK +A Q VV LQ
Sbjct: 181  GDWGTQFGIIRTGGNINECD-------IGDLQEFYKTSKSKYDSDPDFKTKARQSVVKLQ 233

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
            R DP Y++AW  IC+VSR ++ K+Y RL V L E+ ESFY  ++   +  LEK GL+E  
Sbjct: 234  RGDPKYREAWHKICEVSRAEYNKVYRRLGVHLEEKPESFYNPYIPPTLKKLEKLGLIEDS 293

Query: 1398 DGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            DG ++++  G DR   P+   KSDGG+ Y ++DLA++  R+  EK DW +YVTD
Sbjct: 294  DGARVIFVEGVDR---PLIARKSDGGYNYFSTDLASLWYRLNIEKIDWNIYVTD 344


>gi|54290192|dbj|BAD61080.1| putative arginyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 631

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/591 (41%), Positives = 355/591 (60%), Gaps = 38/591 (6%)

Query: 514  FGDFQCNDAMAL-CKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            FGD+QCN+AM++  +I       +NP  + Q+IA+        N   + +I+ I VA PG
Sbjct: 9    FGDYQCNNAMSVFSRIRGSATNFRNPMAVGQAIAN--------NLPQSNIIESISVAGPG 60

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 630
            ++N+ LS  +  ++I+D++V G++   P L  K R ++DFSSPNIAKEMHVGH+RSTIIG
Sbjct: 61   YINITLSSNWIAQRIQDMLVCGIKTWAPILPVK-RAVLDFSSPNIAKEMHVGHIRSTIIG 119

Query: 631  DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESK 689
            DT++ + E+   +V+R NHVGDWGTQFGMLI  L ++FPD+    +  + DLQ+FYK SK
Sbjct: 120  DTLAHMFEFTNVEVLRRNHVGDWGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASK 179

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 749
            KRFD+D  FK+RA Q        +  Y+ AW+ IC +SR +F  +Y RLNV L E+GESF
Sbjct: 180  KRFDDDPDFKERARQA-----GGEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESF 234

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 809
            Y  ++  ++  L  KGL+    G ++++ ED    P+ ++K DGGF Y ++DLAA+  R+
Sbjct: 235  YNPYIPPVLEELTNKGLIVESKGARVIFVEDH---PLIVIKQDGGFNYASTDLAALWYRL 291

Query: 810  EEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL---NPNK-TRMDFVGFGVVLGEDRKKF 865
              EKA+WI+YVTD+GQ  HF +L   AK AG L   N  K  +   VGFG+VLG D K+F
Sbjct: 292  NVEKAEWIIYVTDVGQQRHFHMLFTAAKMAGWLPEQNGKKYPKASHVGFGLVLGSDGKRF 351

Query: 866  KTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
            +TR  + V+L +LLDE   RS    + +     +  + T  EL    +A+ YG +KY+DL
Sbjct: 352  RTRCSEVVRLVDLLDEAKARSKAQLIKRFTGNGQIADWTDDELDRTSEAIGYGAVKYSDL 411

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
             +NR  DY FSFD+ML D+GNTAVYL YA+ RI SI R A  + E L++      ++L H
Sbjct: 412  KNNRLTDYTFSFDQMLSDKGNTAVYLQYAHARICSIIRKASKDVEKLKMTGA---ITLGH 468

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
              E  L   L++  +V+     DL  H LC+YLY +S  FS+FY NC  +E    G +  
Sbjct: 469  PYERFLGLHLIQFTEVVEQACADLQPHRLCDYLYSLSLTFSKFYTNCQVLENPKLGFLLR 528

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRTAIAEEEKKQGISSSISSQTKGAAK 1092
            + +GR  L  ++           + R+A A      GI+   +    GAA+
Sbjct: 529  LGSGRGELFTSSPSPTATVLSFSSPRSASA------GIALYSAPTVPGAAE 573



 Score =  282 bits (722), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 212/326 (65%), Gaps = 24/326 (7%)

Query: 124 FGDFQCNDAMAL-CKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           FGD+QCN+AM++  +I       +NP  + Q+IA+        N   + +I+ I VA PG
Sbjct: 9   FGDYQCNNAMSVFSRIRGSATNFRNPMAVGQAIAN--------NLPQSNIIESISVAGPG 60

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           ++N+ LS  +  ++I+D++V G++   P L  K R ++DFSSPNIAKEMHVGH+RSTIIG
Sbjct: 61  YINITLSSNWIAQRIQDMLVCGIKTWAPILPVK-RAVLDFSSPNIAKEMHVGHIRSTIIG 119

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESK 299
           DT++ + E+   +V+R NHVGDWGTQFGMLI  L ++FPD+    +  + DLQ+FYK SK
Sbjct: 120 DTLAHMFEFTNVEVLRRNHVGDWGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASK 179

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 359
           KRFD+D  FK+RA Q        +  Y+ AW+ IC +SR +F  +Y RLNV L E+GESF
Sbjct: 180 KRFDDDPDFKERARQA-----GGEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESF 234

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 419
           Y  ++  ++  L  KGL+    G ++++ ED    P+ ++K DGGF Y ++DLAA+  R+
Sbjct: 235 YNPYIPPVLEELTNKGLIVESKGARVIFVEDH---PLIVIKQDGGFNYASTDLAALWYRL 291

Query: 420 EEEKADWIVYVTD---HRSYHQVLQA 442
             EKA+WI+YVTD    R +H +  A
Sbjct: 292 NVEKAEWIIYVTDVGQQRHFHMLFTA 317



 Score =  281 bits (719), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 144/324 (44%), Positives = 211/324 (65%), Gaps = 24/324 (7%)

Query: 1141 FGDFQCNDAMAL-CKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            FGD+QCN+AM++  +I       +NP  + Q+IA+        N   + +I+ I VA PG
Sbjct: 9    FGDYQCNNAMSVFSRIRGSATNFRNPMAVGQAIAN--------NLPQSNIIESISVAGPG 60

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            ++N+ LS  +  ++I+D++V G++   P L  K R ++DFSSPNIAKEMHVGH+RSTIIG
Sbjct: 61   YINITLSSNWIAQRIQDMLVCGIKTWAPILPVK-RAVLDFSSPNIAKEMHVGHIRSTIIG 119

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESK 1316
            DT++ + E+   +V+R NHVGDWGTQFGMLI  L ++FPD+    +  + DLQ+FYK SK
Sbjct: 120  DTLAHMFEFTNVEVLRRNHVGDWGTQFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASK 179

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 1376
            KRFD+D  FK+RA Q        +  Y+ AW+ IC +SR +F  +Y RLNV L E+GESF
Sbjct: 180  KRFDDDPDFKERARQA-----GGEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESF 234

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 1436
            Y  ++  ++  L  KGL+    G ++++ ED    P+ ++K DGGF Y ++DLAA+  R+
Sbjct: 235  YNPYIPPVLEELTNKGLIVESKGARVIFVEDH---PLIVIKQDGGFNYASTDLAALWYRL 291

Query: 1437 EEEKADWIVYVTD---HRSYHQVL 1457
              EKA+WI+YVTD    R +H + 
Sbjct: 292  NVEKAEWIIYVTDVGQQRHFHMLF 315


>gi|359459146|ref|ZP_09247709.1| arginyl-tRNA synthetase [Acaryochloris sp. CCMEE 5410]
          Length = 584

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/605 (42%), Positives = 367/605 (60%), Gaps = 43/605 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+   L   F  A+  AF    +   SV         KFGD+Q N ++AL K        
Sbjct: 3    SILKTLETRFDRALNAAFG--SELVISVPVVGVASNPKFGDYQSNVSLALAKPLG----- 55

Query: 536  KNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
            ++P  IA Q +  +   +L   P+         +A PGF+N+ L   +  EQ++ +  + 
Sbjct: 56   QSPRGIADQILQHLEVDDLCEPPT---------IAGPGFINLTLKPTFLAEQLQQMQADP 106

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G++  ++    RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ G+DV+RLNHVG
Sbjct: 107  RLGIE--SIADPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGNDVLRLNHVG 164

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            DWGTQFGMLI +L +  P  LT S    + DL AFYK++K+RFDEDE F+ ++   VV L
Sbjct: 165  DWGTQFGMLITYLSEVHPAALTTSDALDLGDLVAFYKKAKQRFDEDEDFQVQSRNAVVKL 224

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q+ DP+  +AW+++CD SRR+F+KIY  L++ LTERGESFY   +  ++  L+K GLLE 
Sbjct: 225  QQGDPEATQAWQLLCDQSRREFEKIYRDLDIELTERGESFYNPLLADVLTDLDKAGLLET 284

Query: 770  DDGRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLG 824
            D G + ++ E     +G   P+ + KSDGGF Y T+DLAA+R RI  E A  I+YVT   
Sbjct: 285  DQGAQCVFLEGFTNKQGDPQPLIVQKSDGGFNYATTDLAALRHRINTESATRIIYVTGAE 344

Query: 825  QGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
            Q  HF  + + A +A  + P+  ++  V FG+V GED KK KTRSG+TV+L  LLDE + 
Sbjct: 345  QINHFAQVFQVATRAHWI-PDTVQVVHVPFGMVQGEDGKKLKTRSGETVRLRGLLDEAIS 403

Query: 885  RSLDKLKDK---NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
            R+   ++ +   +  TE TP  ++   Q +  G +KYADLS NR  +YVFS+DKML  +G
Sbjct: 404  RAQSDVESRLAEDERTE-TPEFITNVAQVIGLGAVKYADLSQNRTSNYVFSYDKMLALQG 462

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
            NTA Y++YAY R+  I+R   I+   L  A+    +++    E ALAK LL+M D+L  V
Sbjct: 463  NTAPYMIYAYVRVQGISRKGNIDFSKLSDAS----MTIAEPSELALAKHLLQMQDILAEV 518

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
              DL  + LC+YL+++S  F++FYD C  +  +   +     T RL+L++ TA+ +K   
Sbjct: 519  AADLMPNRLCQYLFELSQKFNQFYDQCPVLNAEEPAR-----TSRLVLSDLTARTLKLGL 573

Query: 1062 DILNI 1066
             +L I
Sbjct: 574  SLLGI 578



 Score =  280 bits (715), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 159/357 (44%), Positives = 221/357 (61%), Gaps = 29/357 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           S+   L   F  A+  AF    +   SV         KFGD+Q N ++AL K        
Sbjct: 3   SILKTLETRFDRALNAAFG--SELVISVPVVGVASNPKFGDYQSNVSLALAKPLG----- 55

Query: 146 KNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
           ++P  IA Q +  +   +L   P+         +A PGF+N+ L   +  EQ++ +  + 
Sbjct: 56  QSPRGIADQILQHLEVDDLCEPPT---------IAGPGFINLTLKPTFLAEQLQQMQADP 106

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G++  ++    RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ G+DV+RLNHVG
Sbjct: 107 RLGIE--SIADPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGNDVLRLNHVG 164

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           DWGTQFGMLI +L +  P  LT S    + DL AFYK++K+RFDEDE F+ ++   VV L
Sbjct: 165 DWGTQFGMLITYLSEVHPAALTTSDALDLGDLVAFYKKAKQRFDEDEDFQVQSRNAVVKL 224

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 379
           Q+ DP+  +AW+++CD SRR+F+KIY  L++ LTERGESFY   +  ++  L+K GLLE 
Sbjct: 225 QQGDPEATQAWQLLCDQSRREFEKIYRDLDIELTERGESFYNPLLADVLTDLDKAGLLET 284

Query: 380 DDGRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
           D G + ++ E     +G   P+ + KSDGGF Y T+DLAA+R RI  E A  I+YVT
Sbjct: 285 DQGAQCVFLEGFTNKQGDPQPLIVQKSDGGFNYATTDLAALRHRINTESATRIIYVT 341



 Score =  280 bits (715), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 159/357 (44%), Positives = 221/357 (61%), Gaps = 29/357 (8%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+   L   F  A+  AF    +   SV         KFGD+Q N ++AL K        
Sbjct: 3    SILKTLETRFDRALNAAFG--SELVISVPVVGVASNPKFGDYQSNVSLALAKPLG----- 55

Query: 1163 KNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
            ++P  IA Q +  +   +L   P+         +A PGF+N+ L   +  EQ++ +  + 
Sbjct: 56   QSPRGIADQILQHLEVDDLCEPPT---------IAGPGFINLTLKPTFLAEQLQQMQADP 106

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G++  ++    RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ G+DV+RLNHVG
Sbjct: 107  RLGIE--SIADPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGNDVLRLNHVG 164

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            DWGTQFGMLI +L +  P  LT S    + DL AFYK++K+RFDEDE F+ ++   VV L
Sbjct: 165  DWGTQFGMLITYLSEVHPAALTTSDALDLGDLVAFYKKAKQRFDEDEDFQVQSRNAVVKL 224

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q+ DP+  +AW+++CD SRR+F+KIY  L++ LTERGESFY   +  ++  L+K GLLE 
Sbjct: 225  QQGDPEATQAWQLLCDQSRREFEKIYRDLDIELTERGESFYNPLLADVLTDLDKAGLLET 284

Query: 1397 DDGRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
            D G + ++ E     +G   P+ + KSDGGF Y T+DLAA+R RI  E A  I+YVT
Sbjct: 285  DQGAQCVFLEGFTNKQGDPQPLIVQKSDGGFNYATTDLAALRHRINTESATRIIYVT 341


>gi|317968164|ref|ZP_07969554.1| arginyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 594

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/593 (43%), Positives = 349/593 (58%), Gaps = 40/593 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELG------DKTASVASTNEKYVHKFGDFQCNDAMALCKI 528
            + +   L +    A+Q AFPE        D   + AS  E     FGDFQ N A+ L K 
Sbjct: 2    LRIAQSLENQLRDAMQRAFPEAAAAGQAFDPQLAPASKPE-----FGDFQANGALPLAKP 56

Query: 529  FKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 588
                  K         IA  V  +L  + S   V    ++A PGF+N+ L       +++
Sbjct: 57   LGQPPRK---------IAEAVVEQLKADESFMAVCQAPQIAGPGFINITLQPERLAAEVQ 107

Query: 589  DIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
              + +  +  P + +   V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RL
Sbjct: 108  QRLGDARLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRL 167

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQC 705
            NHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFDEDE F+  + + 
Sbjct: 168  NHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVAFYREAKKRFDEDEAFQTTSREE 227

Query: 706  VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 765
            VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++E +V  LE  G
Sbjct: 228  VVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLEGVVRDLEATG 287

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADW 816
            LL +DDG   ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     E + A  
Sbjct: 288  LLVVDDGAGCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGSAPEGDGARR 347

Query: 817  IVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLS 876
            +VYVTD GQ  HF  + + A++AG L P   R++ V FG+V GED KK KTR+GDTV+L 
Sbjct: 348  VVYVTDAGQANHFAGVFQVARRAGWL-PEGARLEHVPFGLVQGEDGKKLKTRAGDTVRLR 406

Query: 877  ELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFD 934
            +LLDE + RS   L+ +      +  E  ++     V    +KYADLS NR  +Y FSFD
Sbjct: 407  DLLDEAVERSEADLRRRLEEEGRSEDEAFIAHVANTVGLAAVKYADLSQNRITNYQFSFD 466

Query: 935  KMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRM 994
            +ML  +GNTA YLLYA  RIA IAR  G    DL  AA +  +     +E+AL + LL+ 
Sbjct: 467  RMLALQGNTAPYLLYAVVRIAGIARKGG----DLD-AASTGGLQFSEPQEWALVRELLKF 521

Query: 995  NDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRL 1047
            + V+  V  +L  + LC YL+++S  F+ FYD    ++ + E     +   RL
Sbjct: 522  DAVIAEVEEELLPNRLCTYLFELSQVFNRFYDQVPVLKAEPEALPSRLALCRL 574



 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 165/366 (45%), Positives = 220/366 (60%), Gaps = 32/366 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELG------DKTASVASTNEKYVHKFGDFQCNDAMALCKI 138
           + +   L +    A+Q AFPE        D   + AS  E     FGDFQ N A+ L K 
Sbjct: 2   LRIAQSLENQLRDAMQRAFPEAAAAGQAFDPQLAPASKPE-----FGDFQANGALPLAKP 56

Query: 139 FKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 198
                 K         IA  V  +L  + S   V    ++A PGF+N+ L       +++
Sbjct: 57  LGQPPRK---------IAEAVVEQLKADESFMAVCQAPQIAGPGFINITLQPERLAAEVQ 107

Query: 199 DIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 257
             + +  +  P + +   V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RL
Sbjct: 108 QRLGDARLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRL 167

Query: 258 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQC 315
           NHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFDEDE F+  + + 
Sbjct: 168 NHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVAFYREAKKRFDEDEAFQTTSREE 227

Query: 316 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 375
           VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++E +V  LE  G
Sbjct: 228 VVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLEGVVRDLEATG 287

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADW 426
           LL +DDG   ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     E + A  
Sbjct: 288 LLVVDDGAGCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGSAPEGDGARR 347

Query: 427 IVYVTD 432
           +VYVTD
Sbjct: 348 VVYVTD 353



 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 165/366 (45%), Positives = 220/366 (60%), Gaps = 32/366 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELG------DKTASVASTNEKYVHKFGDFQCNDAMALCKI 1155
            + +   L +    A+Q AFPE        D   + AS  E     FGDFQ N A+ L K 
Sbjct: 2    LRIAQSLENQLRDAMQRAFPEAAAAGQAFDPQLAPASKPE-----FGDFQANGALPLAKP 56

Query: 1156 FKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 1215
                  K         IA  V  +L  + S   V    ++A PGF+N+ L       +++
Sbjct: 57   LGQPPRK---------IAEAVVEQLKADESFMAVCQAPQIAGPGFINITLQPERLAAEVQ 107

Query: 1216 DIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
              + +  +  P + +   V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RL
Sbjct: 108  QRLGDARLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRL 167

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQC 1332
            NHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFDEDE F+  + + 
Sbjct: 168  NHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVAFYREAKKRFDEDEAFQTTSREE 227

Query: 1333 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKG 1392
            VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++E +V  LE  G
Sbjct: 228  VVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLEGVVRDLEATG 287

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADW 1443
            LL +DDG   ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     E + A  
Sbjct: 288  LLVVDDGAGCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGSAPEGDGARR 347

Query: 1444 IVYVTD 1449
            +VYVTD
Sbjct: 348  VVYVTD 353


>gi|434403833|ref|YP_007146718.1| arginyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
 gi|428258088|gb|AFZ24038.1| arginyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
          Length = 588

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/569 (44%), Positives = 361/569 (63%), Gaps = 35/569 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N A++L K        K P    ++IA+ +  +L     L+ + + +E+A PG
Sbjct: 38   KFGDYQANVALSLSKRLG-----KQP----RAIATAIVDKL----DLSDICEPLEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   +   Q+  I  +   GV  P      R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKTAFLEAQLNAIQADPRLGV--PMAKTPQREIVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
            GD I+R+LE+LGHDV+RLNHVGDWGTQFGMLI +L++ +P+ LT +    I DL +FY+E
Sbjct: 143  GDAIARILEFLGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALDIGDLVSFYRE 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +K RFD DE F++ A Q VV LQ    D   AW+++C+ SR +FQ IYD L+V + ERGE
Sbjct: 203  AKLRFDTDEAFQETARQEVVRLQAGAEDTIHAWKLLCEQSRLEFQIIYDLLDVHVMERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   +  +V  L+K  LL  + G K ++       +   +P+ + K+DGG+ Y T+DL
Sbjct: 263  SFYNSFLPGIVEDLDKSSLLVENQGAKCVFLDGFTNREGEPLPLIVQKTDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            A++R RI++++A  I+YVTD GQ  HF    + A+KAG + P+   +  V FG+VLGED 
Sbjct: 323  ASLRYRIQQDEAKRIIYVTDSGQANHFAQFFQVARKAGWI-PDDVELVHVPFGLVLGEDG 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYAD 920
            KKFKTRSGDTV+L +LLDE + R+   L+ + +  E   TE  ++   + V    +KYAD
Sbjct: 382  KKFKTRSGDTVRLRDLLDEAIARTRADLEARLQEEERQETEEFINNVAEVVGISAVKYAD 441

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  +Y+FS+DKMLD +GNTA Y+LYAY RI  I+R   IN ++L     +  V L+
Sbjct: 442  LSQNRTSNYIFSYDKMLDLKGNTAPYMLYAYARIQGISRKGDINFQEL---GDNAKVILQ 498

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE-KDAEGKI 1039
            H  E ALAK LL++++V+  V +DL  + LCEYLY++   F+ FYD  + +   +AE   
Sbjct: 499  HPTELALAKDLLQLDEVISTVEQDLLPNRLCEYLYELCKKFNLFYDRIHGVPILEAE--- 555

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +   T RL+L + TA+ +K   ++L I+ 
Sbjct: 556  EPQRTSRLILCDLTARTLKLGLNLLGIQV 584



 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/320 (45%), Positives = 207/320 (64%), Gaps = 25/320 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N A++L K        K P    ++IA+ +  +L     L+ + + +E+A PG
Sbjct: 38  KFGDYQANVALSLSKRLG-----KQP----RAIATAIVDKL----DLSDICEPLEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   +   Q+  I  +   GV  P      R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINLKLKTAFLEAQLNAIQADPRLGV--PMAKTPQREIVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
           GD I+R+LE+LGHDV+RLNHVGDWGTQFGMLI +L++ +P+ LT +    I DL +FY+E
Sbjct: 143 GDAIARILEFLGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALDIGDLVSFYRE 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +K RFD DE F++ A Q VV LQ    D   AW+++C+ SR +FQ IYD L+V + ERGE
Sbjct: 203 AKLRFDTDEAFQETARQEVVRLQAGAEDTIHAWKLLCEQSRLEFQIIYDLLDVHVMERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   +  +V  L+K  LL  + G K ++       +   +P+ + K+DGG+ Y T+DL
Sbjct: 263 SFYNSFLPGIVEDLDKSSLLVENQGAKCVFLDGFTNREGEPLPLIVQKTDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTD 432
           A++R RI++++A  I+YVTD
Sbjct: 323 ASLRYRIQQDEAKRIIYVTD 342



 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/320 (45%), Positives = 207/320 (64%), Gaps = 25/320 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N A++L K        K P    ++IA+ +  +L     L+ + + +E+A PG
Sbjct: 38   KFGDYQANVALSLSKRLG-----KQP----RAIATAIVDKL----DLSDICEPLEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   +   Q+  I  +   GV  P      R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLKTAFLEAQLNAIQADPRLGV--PMAKTPQREIVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
            GD I+R+LE+LGHDV+RLNHVGDWGTQFGMLI +L++ +P+ LT +    I DL +FY+E
Sbjct: 143  GDAIARILEFLGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALDIGDLVSFYRE 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +K RFD DE F++ A Q VV LQ    D   AW+++C+ SR +FQ IYD L+V + ERGE
Sbjct: 203  AKLRFDTDEAFQETARQEVVRLQAGAEDTIHAWKLLCEQSRLEFQIIYDLLDVHVMERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   +  +V  L+K  LL  + G K ++       +   +P+ + K+DGG+ Y T+DL
Sbjct: 263  SFYNSFLPGIVEDLDKSSLLVENQGAKCVFLDGFTNREGEPLPLIVQKTDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            A++R RI++++A  I+YVTD
Sbjct: 323  ASLRYRIQQDEAKRIIYVTD 342


>gi|412990264|emb|CCO19582.1| arginyl-tRNA synthetase [Bathycoccus prasinos]
          Length = 649

 Score =  441 bits (1135), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 256/602 (42%), Positives = 363/602 (60%), Gaps = 49/602 (8%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG--EKKNP 538
            L  +FT AVQ A+PE         S NE      GD+Q NDAM L  + ++ G  + K+P
Sbjct: 75   LKSLFTQAVQAAYPE----NFKEVSLNECANSGLGDYQFNDAMHLFSVVREVGGCDVKSP 130

Query: 539  FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQP- 597
             ++AQ+I ++    L  NP      +   +A PGF+NV +S  Y   +I     N  +P 
Sbjct: 131  REVAQNIINM----LPVNP----FFENPSIAGPGFINVKISDSYISSKILQNF-NICEPR 181

Query: 598  -------PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
                     +N   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I R+LEY   + +RLNHV
Sbjct: 182  ERRVNTAENVNYP-RVIVDFSSPNIAKEMHVGHLRSTIIGDSICRMLEYKNIETLRLNHV 240

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLI +L D+  D++     I DLQ+ YK +KKRFDED  FK R+   VV LQ
Sbjct: 241  GDWGTQFGMLIEYLNDEHDDFV---DTIGDLQSCYKLAKKRFDEDTEFKIRSQAAVVKLQ 297

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              DP   + WE +C  SR +F+ IY+ LNV ++ERGESFY   +  ++  LE+K +    
Sbjct: 298  AGDPKMLEIWENVCQTSRNEFETIYEALNVRISERGESFYNLMISGILEELEQKNIAVKS 357

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            +G   ++    G+ P+   KSDGG+ Y ++DLAAI  RI+ EKADW++YVTD GQ  HF 
Sbjct: 358  EGALCIFSSFEGT-PLICRKSDGGYNYASTDLAAINHRIKYEKADWVIYVTDSGQKKHFA 416

Query: 831  LLEECAKKAGIL---NPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
             + +  ++AG L     +  R+  VGFG+V+GED K+F+TRSG+ ++L ELL E   R  
Sbjct: 417  GIFDATERAGWLERCEKSDVRLSHVGFGLVMGEDGKRFRTRSGEVIRLKELLSEAESRCY 476

Query: 888  DKLKDKNRHTE-LTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
            D+L  KNR T  L+  E+ +  + +  G IKYADL +N + +YVFSFD+MLD +GNTA+Y
Sbjct: 477  DEL--KNRGTSGLSEIEMKQTARKLGIGAIKYADLQNNLSTNYVFSFDRMLDLKGNTAIY 534

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTP--VSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
            L YA+ R++++     I+ +++      TP     + ++E ALA  +L+  + L    +D
Sbjct: 535  LQYAHVRVSAVLDKTQIDVQNV------TPQEFRFKAKEERALALHILKFAESLDSSLQD 588

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            L    +C+YLY +S+ F++FY +C  I  D E         R++L  ATA VM++CF IL
Sbjct: 589  LMPSRICDYLYTLSSLFNDFYGSCKVIGDDNE-------ESRIILCHATASVMRRCFFIL 641

Query: 1065 NI 1066
             I
Sbjct: 642  GI 643



 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 159/352 (45%), Positives = 214/352 (60%), Gaps = 28/352 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG--EKKNP 148
           L  +FT AVQ A+PE         S NE      GD+Q NDAM L  + ++ G  + K+P
Sbjct: 75  LKSLFTQAVQAAYPE----NFKEVSLNECANSGLGDYQFNDAMHLFSVVREVGGCDVKSP 130

Query: 149 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQP- 207
            ++AQ+I ++    L  NP      +   +A PGF+NV +S  Y   +I     N  +P 
Sbjct: 131 REVAQNIINM----LPVNP----FFENPSIAGPGFINVKISDSYISSKILQNF-NICEPR 181

Query: 208 -------PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
                    +N   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I R+LEY   + +RLNHV
Sbjct: 182 ERRVNTAENVNYP-RVIVDFSSPNIAKEMHVGHLRSTIIGDSICRMLEYKNIETLRLNHV 240

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGMLI +L D+  D++     I DLQ+ YK +KKRFDED  FK R+   VV LQ
Sbjct: 241 GDWGTQFGMLIEYLNDEHDDFV---DTIGDLQSCYKLAKKRFDEDTEFKIRSQAAVVKLQ 297

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             DP   + WE +C  SR +F+ IY+ LNV ++ERGESFY   +  ++  LE+K +    
Sbjct: 298 AGDPKMLEIWENVCQTSRNEFETIYEALNVRISERGESFYNLMISGILEELEQKNIAVKS 357

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +G   ++    G+ P+   KSDGG+ Y ++DLAAI  RI+ EKADW++YVTD
Sbjct: 358 EGALCIFSSFEGT-PLICRKSDGGYNYASTDLAAINHRIKYEKADWVIYVTD 408



 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 159/352 (45%), Positives = 214/352 (60%), Gaps = 28/352 (7%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG--EKKNP 1165
            L  +FT AVQ A+PE         S NE      GD+Q NDAM L  + ++ G  + K+P
Sbjct: 75   LKSLFTQAVQAAYPE----NFKEVSLNECANSGLGDYQFNDAMHLFSVVREVGGCDVKSP 130

Query: 1166 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQP- 1224
             ++AQ+I ++    L  NP      +   +A PGF+NV +S  Y   +I     N  +P 
Sbjct: 131  REVAQNIINM----LPVNP----FFENPSIAGPGFINVKISDSYISSKILQNF-NICEPR 181

Query: 1225 -------PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
                     +N   RV+VDFSSPNIAKEMHVGHLRSTIIGD+I R+LEY   + +RLNHV
Sbjct: 182  ERRVNTAENVNYP-RVIVDFSSPNIAKEMHVGHLRSTIIGDSICRMLEYKNIETLRLNHV 240

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLI +L D+  D++     I DLQ+ YK +KKRFDED  FK R+   VV LQ
Sbjct: 241  GDWGTQFGMLIEYLNDEHDDFV---DTIGDLQSCYKLAKKRFDEDTEFKIRSQAAVVKLQ 297

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              DP   + WE +C  SR +F+ IY+ LNV ++ERGESFY   +  ++  LE+K +    
Sbjct: 298  AGDPKMLEIWENVCQTSRNEFETIYEALNVRISERGESFYNLMISGILEELEQKNIAVKS 357

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +G   ++    G+ P+   KSDGG+ Y ++DLAAI  RI+ EKADW++YVTD
Sbjct: 358  EGALCIFSSFEGT-PLICRKSDGGYNYASTDLAAINHRIKYEKADWVIYVTD 408


>gi|428769918|ref|YP_007161708.1| arginyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
 gi|428684197|gb|AFZ53664.1| arginyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
          Length = 582

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 260/608 (42%), Positives = 374/608 (61%), Gaps = 58/608 (9%)

Query: 481  LSDVFTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            L ++FT A+  AF   G++ A+     V ++N K    FGD+QCN A+ L K  + K   
Sbjct: 5    LRNIFTTALVNAF---GEEFANIDPLVVPASNPK----FGDYQCNIALPLAKSLQQK--- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN-- 593
              P  IA++I +   ++    P        +E+A PGF+N+ +   Y  E+IK   +N  
Sbjct: 55   --PRAIAENIVNHAQTQDFCLP--------LEIAGPGFINITIKPEYIAEKIK---LNQQ 101

Query: 594  ----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
                GV+   +++K +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GHDV+RLNH
Sbjct: 102  DERLGVE--KVSEKQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHDVLRLNH 159

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            VGDWGTQFGMLIA+L+ + P+ LT +    I DL   YK++K +FD D  F++ A Q VV
Sbjct: 160  VGDWGTQFGMLIAYLRLEKPEVLTTANVVDIGDLVTLYKQAKIKFDNDAEFQETARQEVV 219

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ  D +  KAW+++C+ SR++F+ IY  L++ L ERGESFY   +  ++  LE   +L
Sbjct: 220  KLQNKDAESIKAWQLLCEQSRKEFEIIYRLLDIKLIERGESFYNPFLPDVIKDLETANIL 279

Query: 768  ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              D G K ++      ++   +P+ + KSDGG+ Y T+DLAAI+ RI+E++A+ I+YVTD
Sbjct: 280  TEDQGAKCVFLDGFVNKEGNPLPLIVQKSDGGYNYATTDLAAIKYRIKEDEAERIIYVTD 339

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQ  HF  + + AKKA  + P+   +  V FG+VL ED KK KTRSG+T+KL +LL E 
Sbjct: 340  AGQANHFAQVFQVAKKANFV-PDNVELVHVPFGLVLAEDGKKIKTRSGETIKLKDLLKEA 398

Query: 883  LRRSLDKLKDKNRHTELTPTE----LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            + R+   L  +NR T     E    ++E  Q V    +KYADLS NR  DY FS+DKML 
Sbjct: 399  VNRAKQDL--ENRLTTEGRNEEEDFINEVSQIVGLSAVKYADLSQNRTTDYRFSYDKMLA 456

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
             +GNTA YLLYAY R+  I+R   I   DL     +  + L  E E  LAK LL+++ ++
Sbjct: 457  LQGNTAPYLLYAYVRVQGISRKGNI---DLDKLESNQDILLTEETELVLAKHLLQLDYII 513

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
              V +DL  + LC YL+++S  F++FYD C  ++ + E K+      RL+LA+ TAK +K
Sbjct: 514  KEVEKDLLPNRLCLYLFELSQKFNQFYDQCPILQAEEEVKL-----SRLILADLTAKTIK 568

Query: 1059 KCFDILNI 1066
                +L I
Sbjct: 569  LGLSLLGI 576



 Score =  273 bits (699), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 160/372 (43%), Positives = 234/372 (62%), Gaps = 46/372 (12%)

Query: 91  LSDVFTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           L ++FT A+  AF   G++ A+     V ++N K    FGD+QCN A+ L K  + K   
Sbjct: 5   LRNIFTTALVNAF---GEEFANIDPLVVPASNPK----FGDYQCNIALPLAKSLQQK--- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN-- 203
             P  IA++I +   ++    P        +E+A PGF+N+ +   Y  E+IK   +N  
Sbjct: 55  --PRAIAENIVNHAQTQDFCLP--------LEIAGPGFINITIKPEYIAEKIK---LNQQ 101

Query: 204 ----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
               GV+   +++K +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GHDV+RLNH
Sbjct: 102 DERLGVE--KVSEKQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHDVLRLNH 159

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVV 317
           VGDWGTQFGMLIA+L+ + P+ LT +    I DL   YK++K +FD D  F++ A Q VV
Sbjct: 160 VGDWGTQFGMLIAYLRLEKPEVLTTANVVDIGDLVTLYKQAKIKFDNDAEFQETARQEVV 219

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 377
            LQ  D +  KAW+++C+ SR++F+ IY  L++ L ERGESFY   +  ++  LE   +L
Sbjct: 220 KLQNKDAESIKAWQLLCEQSRKEFEIIYRLLDIKLIERGESFYNPFLPDVIKDLETANIL 279

Query: 378 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D G K ++      ++   +P+ + KSDGG+ Y T+DLAAI+ RI+E++A+ I+YVTD
Sbjct: 280 TEDQGAKCVFLDGFVNKEGNPLPLIVQKSDGGYNYATTDLAAIKYRIKEDEAERIIYVTD 339

Query: 433 ---HRSYHQVLQ 441
                 + QV Q
Sbjct: 340 AGQANHFAQVFQ 351



 Score =  273 bits (699), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 160/372 (43%), Positives = 234/372 (62%), Gaps = 46/372 (12%)

Query: 1108 LSDVFTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            L ++FT A+  AF   G++ A+     V ++N K    FGD+QCN A+ L K  + K   
Sbjct: 5    LRNIFTTALVNAF---GEEFANIDPLVVPASNPK----FGDYQCNIALPLAKSLQQK--- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN-- 1220
              P  IA++I +   ++    P        +E+A PGF+N+ +   Y  E+IK   +N  
Sbjct: 55   --PRAIAENIVNHAQTQDFCLP--------LEIAGPGFINITIKPEYIAEKIK---LNQQ 101

Query: 1221 ----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
                GV+   +++K +V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GHDV+RLNH
Sbjct: 102  DERLGVE--KVSEKQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHDVLRLNH 159

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            VGDWGTQFGMLIA+L+ + P+ LT +    I DL   YK++K +FD D  F++ A Q VV
Sbjct: 160  VGDWGTQFGMLIAYLRLEKPEVLTTANVVDIGDLVTLYKQAKIKFDNDAEFQETARQEVV 219

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ  D +  KAW+++C+ SR++F+ IY  L++ L ERGESFY   +  ++  LE   +L
Sbjct: 220  KLQNKDAESIKAWQLLCEQSRKEFEIIYRLLDIKLIERGESFYNPFLPDVIKDLETANIL 279

Query: 1395 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D G K ++      ++   +P+ + KSDGG+ Y T+DLAAI+ RI+E++A+ I+YVTD
Sbjct: 280  TEDQGAKCVFLDGFVNKEGNPLPLIVQKSDGGYNYATTDLAAIKYRIKEDEAERIIYVTD 339

Query: 1450 ---HRSYHQVLQ 1458
                  + QV Q
Sbjct: 340  AGQANHFAQVFQ 351


>gi|255070885|ref|XP_002507524.1| arginyl-tRNA synthetase [Micromonas sp. RCC299]
 gi|226522799|gb|ACO68782.1| arginyl-tRNA synthetase [Micromonas sp. RCC299]
          Length = 646

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 263/630 (41%), Positives = 359/630 (56%), Gaps = 52/630 (8%)

Query: 453  SSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKY 510
            SS+ +  T G+     VP  D   +R+ +   F+ AV        L D   S  S N   
Sbjct: 47   SSACNPSTFGS-----VPTGD--GLREIVKAAFSEAVTAVLSRGTLVDVNISECSNN--- 96

Query: 511  VHKFGDFQCNDAMALCKIFKDKGEKK--NPFDIAQSIASVVTSELATNPSLAKVIDKIEV 568
                GD+QCN AM +    K KG+    NP  +A++I   +       P    +  +  V
Sbjct: 97   --VVGDYQCNSAMPIFAELKQKGDTSFSNPRSLAEAIVEAI-------PGREHLFAQTSV 147

Query: 569  AKPGFVNVFLSRVYAGEQIKDIIVNGVQ-----PPTLNKKL--RVLVDFSSPNIAK--EM 619
            A PGFVNV  S  +    + D +VN        PP  N  +  R +VD+SSPNIAK  EM
Sbjct: 148  AGPGFVNVTFSASFLAAGVLDTVVNSTDEKIRIPPQRNMSIPKRAVVDYSSPNIAKASEM 207

Query: 620  HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 679
            HVGHLRSTIIG+TI R LE  G + VRLNHVGDWGTQFGML+ HL D     +     I 
Sbjct: 208  HVGHLRSTIIGETICRALESFGVETVRLNHVGDWGTQFGMLLTHLHDM---QMGSDFAIT 264

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DLQ FYK +K RFD+D+ FK RA   VV LQ  D   +K WE IC++SRRDF++IY  L+
Sbjct: 265  DLQEFYKVAKLRFDKDDDFKARAQSAVVRLQAGDVQMRKLWEEICEISRRDFEEIYRVLD 324

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 799
            +++ ERGESFY + +  ++  L KKG+   D G   ++G +  S P+   KSDGGF Y +
Sbjct: 325  ISIIERGESFYNEIIPLVLDELVKKGIAVEDQGALCIFG-NLESTPLICRKSDGGFNYAS 383

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNP---NKTRMDFVGFGV 856
            +DLAA+ QR  + +AD I+YVTD+GQ  HF  + + A +AG L+     K R+D VGFG+
Sbjct: 384  TDLAALWQRTTQLEADQIIYVTDVGQSKHFEAIFDAANRAGWLDKKDNTKIRLDHVGFGL 443

Query: 857  VLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCI 916
            V+GED K+F+TRSG TV L  LL E   R L+ L  + R ++L   EL EA   +    +
Sbjct: 444  VMGEDGKRFRTRSGGTVPLRSLLSEAQSRCLESL--QTRSSDLDDKELLEASHIMGIAAV 501

Query: 917  KYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP 976
            KYADL +NR+ +YVFS+D+MLD +GNTAVYLLY + RI+++   A    ED  + + +  
Sbjct: 502  KYADLHNNRSTNYVFSYDRMLDMKGNTAVYLLYTHARISTLLSRA----EDQDLTSPAHQ 557

Query: 977  VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE 1036
            +    EKE ALA  +L++ D L  V +DL    LC+Y Y +  A++EFY  C  I    E
Sbjct: 558  MVFTDEKERALAVAILKLPDALRAVVQDLLPSRLCDYAYHLCVAYNEFYSTCKVIGSPEE 617

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
                     RL+L  AT   +++   +L I
Sbjct: 618  -------KSRLILCRATVFSLRRALFVLGI 640



 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 164/397 (41%), Positives = 222/397 (55%), Gaps = 31/397 (7%)

Query: 49  LQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPE--L 106
           ++R  A   K +   + ++S     +   +VP  D   +R+ +   F+ AV        L
Sbjct: 28  VRRRHARHVKVRKCDTLVTSSACNPSTFGSVPTGD--GLREIVKAAFSEAVTAVLSRGTL 85

Query: 107 GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKK--NPFDIAQSIASVVTSELA 164
            D   S  S N       GD+QCN AM +    K KG+    NP  +A++I   +     
Sbjct: 86  VDVNISECSNN-----VVGDYQCNSAMPIFAELKQKGDTSFSNPRSLAEAIVEAI----- 135

Query: 165 TNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-----PPTLNKKL--RVL 217
             P    +  +  VA PGFVNV  S  +    + D +VN        PP  N  +  R +
Sbjct: 136 --PGREHLFAQTSVAGPGFVNVTFSASFLAAGVLDTVVNSTDEKIRIPPQRNMSIPKRAV 193

Query: 218 VDFSSPNIAK--EMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 275
           VD+SSPNIAK  EMHVGHLRSTIIG+TI R LE  G + VRLNHVGDWGTQFGML+ HL 
Sbjct: 194 VDYSSPNIAKASEMHVGHLRSTIIGETICRALESFGVETVRLNHVGDWGTQFGMLLTHLH 253

Query: 276 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 335
           D     +     I DLQ FYK +K RFD+D+ FK RA   VV LQ  D   +K WE IC+
Sbjct: 254 DM---QMGSDFAITDLQEFYKVAKLRFDKDDDFKARAQSAVVRLQAGDVQMRKLWEEICE 310

Query: 336 VSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIP 395
           +SRRDF++IY  L++++ ERGESFY + +  ++  L KKG+   D G   ++G +  S P
Sbjct: 311 ISRRDFEEIYRVLDISIIERGESFYNEIIPLVLDELVKKGIAVEDQGALCIFG-NLESTP 369

Query: 396 MTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +   KSDGGF Y ++DLAA+ QR  + +AD I+YVTD
Sbjct: 370 LICRKSDGGFNYASTDLAALWQRTTQLEADQIIYVTD 406



 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 164/398 (41%), Positives = 221/398 (55%), Gaps = 31/398 (7%)

Query: 1065 NIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPE-- 1122
             +R   A   K +   + ++S     +   +VP  D   +R+ +   F+ AV        
Sbjct: 27   GVRRRHARHVKVRKCDTLVTSSACNPSTFGSVPTGD--GLREIVKAAFSEAVTAVLSRGT 84

Query: 1123 LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKK--NPFDIAQSIASVVTSEL 1180
            L D   S  S N       GD+QCN AM +    K KG+    NP  +A++I   +    
Sbjct: 85   LVDVNISECSNN-----VVGDYQCNSAMPIFAELKQKGDTSFSNPRSLAEAIVEAI---- 135

Query: 1181 ATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ-----PPTLNKKL--RV 1233
               P    +  +  VA PGFVNV  S  +    + D +VN        PP  N  +  R 
Sbjct: 136  ---PGREHLFAQTSVAGPGFVNVTFSASFLAAGVLDTVVNSTDEKIRIPPQRNMSIPKRA 192

Query: 1234 LVDFSSPNIAK--EMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL 1291
            +VD+SSPNIAK  EMHVGHLRSTIIG+TI R LE  G + VRLNHVGDWGTQFGML+ HL
Sbjct: 193  VVDYSSPNIAKASEMHVGHLRSTIIGETICRALESFGVETVRLNHVGDWGTQFGMLLTHL 252

Query: 1292 QDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 1351
             D     +     I DLQ FYK +K RFD+D+ FK RA   VV LQ  D   +K WE IC
Sbjct: 253  HDM---QMGSDFAITDLQEFYKVAKLRFDKDDDFKARAQSAVVRLQAGDVQMRKLWEEIC 309

Query: 1352 DVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSI 1411
            ++SRRDF++IY  L++++ ERGESFY + +  ++  L KKG+   D G   ++G +  S 
Sbjct: 310  EISRRDFEEIYRVLDISIIERGESFYNEIIPLVLDELVKKGIAVEDQGALCIFG-NLEST 368

Query: 1412 PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            P+   KSDGGF Y ++DLAA+ QR  + +AD I+YVTD
Sbjct: 369  PLICRKSDGGFNYASTDLAALWQRTTQLEADQIIYVTD 406


>gi|443327031|ref|ZP_21055666.1| arginyl-tRNA synthetase [Xenococcus sp. PCC 7305]
 gi|442793320|gb|ELS02772.1| arginyl-tRNA synthetase [Xenococcus sp. PCC 7305]
          Length = 584

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 262/606 (43%), Positives = 371/606 (61%), Gaps = 51/606 (8%)

Query: 481  LSDVFTHAVQVAF-PELGDKTAS----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            L ++F  AV+ A     GD+ A+    VA+TN     KFGD+Q N A++L K  K     
Sbjct: 4    LRELFEIAVKDALVAAFGDELAATDPLVAATNNP---KFGDYQSNVALSLPKKLK----- 55

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII---- 591
            ++P    ++IA  + + L  N +     +  E+A PGF+N  +   Y    + +I     
Sbjct: 56   QSP----RAIAEKIIANLPANDTW----ETPEIAGPGFINFTVKPTYLAGLLTEIQGDRN 107

Query: 592  --VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
              +  V+P +     +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ G+DV+RLNH
Sbjct: 108  LGIEKVEPAS-----KIVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGYDVLRLNH 162

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            +GDWGTQFGMLIA+L++ +P+ LT +    I DL + YK++K RFDED  FK+ A   VV
Sbjct: 163  IGDWGTQFGMLIAYLREAYPEALTTADALDIGDLVSLYKKAKIRFDEDVEFKETARNEVV 222

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
             LQ    D + AW ++C+ SRR+FQ IYD L++ LTERGESFY   +  ++  L+++GLL
Sbjct: 223  NLQAGAEDSRHAWGLLCEQSRREFQVIYDLLDINLTERGESFYNPFLPDVLAKLDEQGLL 282

Query: 768  ELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
            E D G K ++ E     D   +P+ + K+DGGF Y T+DLAAI  R+ E+ AD I+YVTD
Sbjct: 283  EEDAGAKCVFLEGFTNKDGDPLPLIVQKTDGGFNYATTDLAAINYRVAEDHADKIIYVTD 342

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQG HF  + + AKK+G+L P       V FG+VLGED K+ KTRSG+T+KL  LLDE 
Sbjct: 343  SGQGNHFAGVFQVAKKSGLL-PENVEAIHVPFGLVLGEDGKRLKTRSGETIKLKSLLDEA 401

Query: 883  LRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            + ++   ++ +    E + T   +    Q V    +KYADLS NR  DY FSF KML  +
Sbjct: 402  IVQARQDIEARLEEEERSETTEFIDRVAQIVGISAVKYADLSQNRTTDYKFSFQKMLALK 461

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAY R   I+R   I+   L    +S  + L  E E  LAK +L++++VL  
Sbjct: 462  GNTAPYLLYAYVRPQGISRKGNIDFTKL----ESAEIVLSEEAELILAKHILQLSEVLQE 517

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V ++L  + LC+YL+++S  F++FYD C  I   AE +     T RL+LA+ TA+ +K  
Sbjct: 518  VEQELLPNRLCQYLFELSQKFNQFYDRC-GILNAAEPQ----RTSRLILADLTARTLKLG 572

Query: 1061 FDILNI 1066
              +L I
Sbjct: 573  LSLLGI 578



 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 160/360 (44%), Positives = 227/360 (63%), Gaps = 39/360 (10%)

Query: 91  LSDVFTHAVQVAF-PELGDKTAS----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           L ++F  AV+ A     GD+ A+    VA+TN     KFGD+Q N A++L K  K     
Sbjct: 4   LRELFEIAVKDALVAAFGDELAATDPLVAATNNP---KFGDYQSNVALSLPKKLK----- 55

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII---- 201
           ++P    ++IA  + + L  N +     +  E+A PGF+N  +   Y    + +I     
Sbjct: 56  QSP----RAIAEKIIANLPANDTW----ETPEIAGPGFINFTVKPTYLAGLLTEIQGDRN 107

Query: 202 --VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
             +  V+P +     +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ G+DV+RLNH
Sbjct: 108 LGIEKVEPAS-----KIVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGYDVLRLNH 162

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 317
           +GDWGTQFGMLIA+L++ +P+ LT +    I DL + YK++K RFDED  FK+ A   VV
Sbjct: 163 IGDWGTQFGMLIAYLREAYPEALTTADALDIGDLVSLYKKAKIRFDEDVEFKETARNEVV 222

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 377
            LQ    D + AW ++C+ SRR+FQ IYD L++ LTERGESFY   +  ++  L+++GLL
Sbjct: 223 NLQAGAEDSRHAWGLLCEQSRREFQVIYDLLDINLTERGESFYNPFLPDVLAKLDEQGLL 282

Query: 378 ELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           E D G K ++ E     D   +P+ + K+DGGF Y T+DLAAI  R+ E+ AD I+YVTD
Sbjct: 283 EEDAGAKCVFLEGFTNKDGDPLPLIVQKTDGGFNYATTDLAAINYRVAEDHADKIIYVTD 342



 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 160/360 (44%), Positives = 227/360 (63%), Gaps = 39/360 (10%)

Query: 1108 LSDVFTHAVQVAF-PELGDKTAS----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            L ++F  AV+ A     GD+ A+    VA+TN     KFGD+Q N A++L K  K     
Sbjct: 4    LRELFEIAVKDALVAAFGDELAATDPLVAATNNP---KFGDYQSNVALSLPKKLK----- 55

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII---- 1218
            ++P    ++IA  + + L  N +     +  E+A PGF+N  +   Y    + +I     
Sbjct: 56   QSP----RAIAEKIIANLPANDTW----ETPEIAGPGFINFTVKPTYLAGLLTEIQGDRN 107

Query: 1219 --VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
              +  V+P +     +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ G+DV+RLNH
Sbjct: 108  LGIEKVEPAS-----KIVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGYDVLRLNH 162

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            +GDWGTQFGMLIA+L++ +P+ LT +    I DL + YK++K RFDED  FK+ A   VV
Sbjct: 163  IGDWGTQFGMLIAYLREAYPEALTTADALDIGDLVSLYKKAKIRFDEDVEFKETARNEVV 222

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
             LQ    D + AW ++C+ SRR+FQ IYD L++ LTERGESFY   +  ++  L+++GLL
Sbjct: 223  NLQAGAEDSRHAWGLLCEQSRREFQVIYDLLDINLTERGESFYNPFLPDVLAKLDEQGLL 282

Query: 1395 ELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            E D G K ++ E     D   +P+ + K+DGGF Y T+DLAAI  R+ E+ AD I+YVTD
Sbjct: 283  EEDAGAKCVFLEGFTNKDGDPLPLIVQKTDGGFNYATTDLAAINYRVAEDHADKIIYVTD 342


>gi|406942961|gb|EKD75067.1| hypothetical protein ACD_44C00240G0002 [uncultured bacterium]
          Length = 584

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/590 (41%), Positives = 360/590 (61%), Gaps = 43/590 (7%)

Query: 481  LSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKN 537
              ++F  A++ ++P      D    + S +EK    FG +QCN AM L K+ +     + 
Sbjct: 8    FQELFYEAIKQSYPHAKIQHDLVEIMQSASEK----FGHYQCNSAMKLSKLLQ-----QP 58

Query: 538  PFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ- 596
            P  IAQ+I       L       ++IDK+E+A PGF+NVF+   Y   ++  ++  GV+ 
Sbjct: 59   PRAIAQAI----LQSLHLQNEFKEIIDKVEIAGPGFINVFIRSTYLSLRLNKML-RGVKF 113

Query: 597  ---PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
                P   +  R++VDFSSPNIAKEMHVGHLRSTIIGD I RL E+ G  V+R+NH+GDW
Sbjct: 114  DLSLPMHQE--RIIVDFSSPNIAKEMHVGHLRSTIIGDAICRLFEFYGDTVLRINHIGDW 171

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIAD--LQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            GT FGMLIA+++   P  L +        L  +YK +KK+FD++E FKK+++Q VVALQ 
Sbjct: 172  GTAFGMLIAYMKQAVPKVLEEKQECTSDQLLQWYKAAKKKFDDEEDFKKQSHQEVVALQS 231

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
             DP   K WEMIC +S++ +Q+IYD L++ + + GESFY   ++ L+  L+ KGL+++ D
Sbjct: 232  GDPKNLKIWEMICKISQKAYQEIYDLLDIKIQDFGESFYNPMLKPLIHDLDVKGLIKISD 291

Query: 772  GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G K ++ E     +  ++P+ + KSDGGFTYDT+DLAA+R R+E +KAD ++Y+TD GQG
Sbjct: 292  GAKCIFIEGFKNREGETLPLIVQKSDGGFTYDTTDLAALRYRVEVQKADRVIYITDQGQG 351

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             HF ++ + ++ AG ++P+KTR+DF GFG+VLG D KKF+TRSG T KL +L+   + ++
Sbjct: 352  NHFSMIFKASQAAGYVDPDKTRLDFAGFGLVLGADGKKFRTRSGGTEKLLDLIHAAVTQA 411

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               +++  R  +L+  E       +    IKYADLS NR+ DYVFS++KML   GNTA +
Sbjct: 412  KKIIQE--RTPDLSSKEQEAQAMVLGVNAIKYADLSCNRHHDYVFSYEKMLRFEGNTATF 469

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            LLYAY RI  I R    + +DL+V      + L H  E  L   L R  + L  VT++L 
Sbjct: 470  LLYAYVRILGIKRRLKFSMDDLKV----NEIILSHPSEIDLGLHLCRFAETLEQVTQNLL 525

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
              +L +YLY ++  F+ F+ +C     D E         RLLL + T +V
Sbjct: 526  PSYLTDYLYVLAEKFNAFFRDCRVEGSDEEA-------SRLLLCDLTGRV 568



 Score =  284 bits (726), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 153/357 (42%), Positives = 226/357 (63%), Gaps = 30/357 (8%)

Query: 91  LSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKN 147
             ++F  A++ ++P      D    + S +EK    FG +QCN AM L K+ +     + 
Sbjct: 8   FQELFYEAIKQSYPHAKIQHDLVEIMQSASEK----FGHYQCNSAMKLSKLLQ-----QP 58

Query: 148 PFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ- 206
           P  IAQ+I       L       ++IDK+E+A PGF+NVF+   Y   ++  ++  GV+ 
Sbjct: 59  PRAIAQAI----LQSLHLQNEFKEIIDKVEIAGPGFINVFIRSTYLSLRLNKML-RGVKF 113

Query: 207 ---PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
               P   +  R++VDFSSPNIAKEMHVGHLRSTIIGD I RL E+ G  V+R+NH+GDW
Sbjct: 114 DLSLPMHQE--RIIVDFSSPNIAKEMHVGHLRSTIIGDAICRLFEFYGDTVLRINHIGDW 171

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPPIAD--LQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           GT FGMLIA+++   P  L +        L  +YK +KK+FD++E FKK+++Q VVALQ 
Sbjct: 172 GTAFGMLIAYMKQAVPKVLEEKQECTSDQLLQWYKAAKKKFDDEEDFKKQSHQEVVALQS 231

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            DP   K WEMIC +S++ +Q+IYD L++ + + GESFY   ++ L+  L+ KGL+++ D
Sbjct: 232 GDPKNLKIWEMICKISQKAYQEIYDLLDIKIQDFGESFYNPMLKPLIHDLDVKGLIKISD 291

Query: 382 GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           G K ++ E     +  ++P+ + KSDGGFTYDT+DLAA+R R+E +KAD ++Y+TD 
Sbjct: 292 GAKCIFIEGFKNREGETLPLIVQKSDGGFTYDTTDLAALRYRVEVQKADRVIYITDQ 348



 Score =  284 bits (726), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 153/357 (42%), Positives = 226/357 (63%), Gaps = 30/357 (8%)

Query: 1108 LSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKN 1164
              ++F  A++ ++P      D    + S +EK    FG +QCN AM L K+ +     + 
Sbjct: 8    FQELFYEAIKQSYPHAKIQHDLVEIMQSASEK----FGHYQCNSAMKLSKLLQ-----QP 58

Query: 1165 PFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQ- 1223
            P  IAQ+I       L       ++IDK+E+A PGF+NVF+   Y   ++  ++  GV+ 
Sbjct: 59   PRAIAQAI----LQSLHLQNEFKEIIDKVEIAGPGFINVFIRSTYLSLRLNKML-RGVKF 113

Query: 1224 ---PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
                P   +  R++VDFSSPNIAKEMHVGHLRSTIIGD I RL E+ G  V+R+NH+GDW
Sbjct: 114  DLSLPMHQE--RIIVDFSSPNIAKEMHVGHLRSTIIGDAICRLFEFYGDTVLRINHIGDW 171

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPPIAD--LQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            GT FGMLIA+++   P  L +        L  +YK +KK+FD++E FKK+++Q VVALQ 
Sbjct: 172  GTAFGMLIAYMKQAVPKVLEEKQECTSDQLLQWYKAAKKKFDDEEDFKKQSHQEVVALQS 231

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             DP   K WEMIC +S++ +Q+IYD L++ + + GESFY   ++ L+  L+ KGL+++ D
Sbjct: 232  GDPKNLKIWEMICKISQKAYQEIYDLLDIKIQDFGESFYNPMLKPLIHDLDVKGLIKISD 291

Query: 1399 GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            G K ++ E     +  ++P+ + KSDGGFTYDT+DLAA+R R+E +KAD ++Y+TD 
Sbjct: 292  GAKCIFIEGFKNREGETLPLIVQKSDGGFTYDTTDLAALRYRVEVQKADRVIYITDQ 348


>gi|118381734|ref|XP_001024027.1| arginyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89305794|gb|EAS03782.1| arginyl-tRNA synthetase family protein [Tetrahymena thermophila
            SB210]
          Length = 616

 Score =  438 bits (1127), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/526 (43%), Positives = 340/526 (64%), Gaps = 29/526 (5%)

Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVG 622
            I+K+ V   GF+ + L +    ++I +I+ NG+  PT  KK ++ VDFSSPNIAKEMHVG
Sbjct: 94   IEKLGVTDQGFLTIKLKQQVIEDEINNILKNGLNYPT-EKKQKIAVDFSSPNIAKEMHVG 152

Query: 623  HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 682
            HLRSTIIG++I R+ E+  H+V+R+NH+GDWGTQFGMLI +++ K+P++L +   ++DL 
Sbjct: 153  HLRSTIIGESICRIFEFQNHEVLRINHLGDWGTQFGMLITYMKRKYPNFLNEPIDLSDLT 212

Query: 683  AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
             FYKESKK FDED  FKK A   VV LQ  DP+ +KAWE++C++SRR+F +IY RL++TL
Sbjct: 213  MFYKESKKLFDEDPEFKKTAQLTVVDLQSGDPECRKAWEILCEISRREFTEIYKRLDITL 272

Query: 743  TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSD 801
             + GESFY   +  ++  L+  G+L   DG + ++ E  +   P+ IVK DGG+ YD++D
Sbjct: 273  EDFGESFYNDKIPAVIQDLKDAGMLVESDGAQCVFIEKYKNQPPLFIVKKDGGYGYDSTD 332

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A I+ R++    + +VY+TD+GQ  HF  +   A+K G   P  TR + +GFG+V GED
Sbjct: 333  MACIKYRLKTLNCNRLVYITDVGQQPHFDYIIAAAEKIGWHVPPTTRAEHMGFGIVQGED 392

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLK--------------------DKNRHTELTP 901
             K+F+TRS +TVKL +LLDE   R+L+K+K                    +K  +T+L+ 
Sbjct: 393  GKRFRTRSSETVKLKDLLDEARERALEKIKERISGGAKEEGAEEDEEEKENKGNYTKLSE 452

Query: 902  TELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTA 961
             E  +A + +    IKY DL  NR  +Y FS+DKMLD +GNTAVYLLY+Y R+ SI R +
Sbjct: 453  EEYLDAAEKMGMAAIKYYDLRQNRISNYNFSYDKMLDTKGNTAVYLLYSYARLCSIIRKS 512

Query: 962  GINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAF 1021
            G+ SE+L    Q+    + H +E  +A  L++  DVL  VT DL ++ L +Y+YD++   
Sbjct: 513  GVQSEELCKIIQTQGFKISHPQERIIASLLIKFPDVLDQVTEDLAINRLTDYMYDLACKV 572

Query: 1022 SEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            +E Y   +    ++E K+      R+LL EAT +V++KCF ++ I+
Sbjct: 573  AEGYRKYHI--NNSEDKLT-----RILLIEATRQVLEKCFYLVGIK 611



 Score =  262 bits (669), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 125/261 (47%), Positives = 185/261 (70%), Gaps = 2/261 (0%)

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVG 232
           I+K+ V   GF+ + L +    ++I +I+ NG+  PT  KK ++ VDFSSPNIAKEMHVG
Sbjct: 94  IEKLGVTDQGFLTIKLKQQVIEDEINNILKNGLNYPT-EKKQKIAVDFSSPNIAKEMHVG 152

Query: 233 HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 292
           HLRSTIIG++I R+ E+  H+V+R+NH+GDWGTQFGMLI +++ K+P++L +   ++DL 
Sbjct: 153 HLRSTIIGESICRIFEFQNHEVLRINHLGDWGTQFGMLITYMKRKYPNFLNEPIDLSDLT 212

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FYKESKK FDED  FKK A   VV LQ  DP+ +KAWE++C++SRR+F +IY RL++TL
Sbjct: 213 MFYKESKKLFDEDPEFKKTAQLTVVDLQSGDPECRKAWEILCEISRREFTEIYKRLDITL 272

Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSD 411
            + GESFY   +  ++  L+  G+L   DG + ++ E  +   P+ IVK DGG+ YD++D
Sbjct: 273 EDFGESFYNDKIPAVIQDLKDAGMLVESDGAQCVFIEKYKNQPPLFIVKKDGGYGYDSTD 332

Query: 412 LAAIRQRIEEEKADWIVYVTD 432
           +A I+ R++    + +VY+TD
Sbjct: 333 MACIKYRLKTLNCNRLVYITD 353



 Score =  262 bits (669), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 125/261 (47%), Positives = 185/261 (70%), Gaps = 2/261 (0%)

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVG 1249
            I+K+ V   GF+ + L +    ++I +I+ NG+  PT  KK ++ VDFSSPNIAKEMHVG
Sbjct: 94   IEKLGVTDQGFLTIKLKQQVIEDEINNILKNGLNYPT-EKKQKIAVDFSSPNIAKEMHVG 152

Query: 1250 HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 1309
            HLRSTIIG++I R+ E+  H+V+R+NH+GDWGTQFGMLI +++ K+P++L +   ++DL 
Sbjct: 153  HLRSTIIGESICRIFEFQNHEVLRINHLGDWGTQFGMLITYMKRKYPNFLNEPIDLSDLT 212

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FYKESKK FDED  FKK A   VV LQ  DP+ +KAWE++C++SRR+F +IY RL++TL
Sbjct: 213  MFYKESKKLFDEDPEFKKTAQLTVVDLQSGDPECRKAWEILCEISRREFTEIYKRLDITL 272

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSD 1428
             + GESFY   +  ++  L+  G+L   DG + ++ E  +   P+ IVK DGG+ YD++D
Sbjct: 273  EDFGESFYNDKIPAVIQDLKDAGMLVESDGAQCVFIEKYKNQPPLFIVKKDGGYGYDSTD 332

Query: 1429 LAAIRQRIEEEKADWIVYVTD 1449
            +A I+ R++    + +VY+TD
Sbjct: 333  MACIKYRLKTLNCNRLVYITD 353


>gi|318040673|ref|ZP_07972629.1| arginyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 597

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/597 (42%), Positives = 356/597 (59%), Gaps = 45/597 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELG------DKTASVASTNEKYVHKFGDFQCNDAMALCKI 528
            + + + L +    A++ AFPE        D   + AS  E     FGDFQ N A+ L K 
Sbjct: 2    LRIAETLDNQLRAAMERAFPEAAPPAGGFDPQLAPASKPE-----FGDFQANGALPLAKP 56

Query: 529  FKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 588
                          ++IA+ V  +L   PS A++  + ++A PGF+N+ L       +++
Sbjct: 57   LGQP---------PRAIATAVVEQLKAYPSFAELCLEPQIAGPGFINLTLRPERLAAEVQ 107

Query: 589  DIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 645
              + +   GV  P +     V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+
Sbjct: 108  ACLQDQRLGV--PAVQGGSPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVL 165

Query: 646  RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAY 703
            RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  + 
Sbjct: 166  RLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQTTSR 225

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 763
            + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++E +V  LE 
Sbjct: 226  EEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLEGVVADLEA 285

Query: 764  KGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKA 814
             GLL +DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A
Sbjct: 286  TGLLVVDDGARCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGA 345

Query: 815  DWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVK 874
              ++YVTD GQ  HF  + + A++AG + P   R++ V FG+V GED KK KTR+GDTV+
Sbjct: 346  RRVIYVTDAGQANHFAGVFQVARRAGWV-PEDGRLEHVPFGLVQGEDGKKLKTRAGDTVR 404

Query: 875  LSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFS 932
            L +LLDE + R+   L+ +         E  + +    V    +KYADLS NR  +Y FS
Sbjct: 405  LRDLLDEAVERAEADLRRRLEEEGRQEEEAFIQQVATTVGLAAVKYADLSQNRITNYQFS 464

Query: 933  FDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST--PVSLEHEKEFALAKT 990
            FD+ML  +GNTA YLLYA  RIA IAR  G    DL  ++     P+S    +E+AL + 
Sbjct: 465  FDRMLALQGNTAPYLLYAVVRIAGIARKGG----DLEGSSVPIDQPLSFHEPQEWALVRE 520

Query: 991  LLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRL 1047
            LL+ + V+  V  +L  + LC YL+++S  F+ FYD    ++ D   +   +   RL
Sbjct: 521  LLKFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYDQVPVLKADEPARASRLALCRL 577



 Score =  292 bits (747), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 227/368 (61%), Gaps = 36/368 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELG------DKTASVASTNEKYVHKFGDFQCNDAMALCKI 138
           + + + L +    A++ AFPE        D   + AS  E     FGDFQ N A+ L K 
Sbjct: 2   LRIAETLDNQLRAAMERAFPEAAPPAGGFDPQLAPASKPE-----FGDFQANGALPLAKP 56

Query: 139 FKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 198
                         ++IA+ V  +L   PS A++  + ++A PGF+N+ L       +++
Sbjct: 57  LGQP---------PRAIATAVVEQLKAYPSFAELCLEPQIAGPGFINLTLRPERLAAEVQ 107

Query: 199 DIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 255
             + +   GV  P +     V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+
Sbjct: 108 ACLQDQRLGV--PAVQGGSPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVL 165

Query: 256 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAY 313
           RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  + 
Sbjct: 166 RLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQTTSR 225

Query: 314 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 373
           + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++E +V  LE 
Sbjct: 226 EEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLEGVVADLEA 285

Query: 374 KGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKA 424
            GLL +DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A
Sbjct: 286 TGLLVVDDGARCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGA 345

Query: 425 DWIVYVTD 432
             ++YVTD
Sbjct: 346 RRVIYVTD 353



 Score =  292 bits (747), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 227/368 (61%), Gaps = 36/368 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELG------DKTASVASTNEKYVHKFGDFQCNDAMALCKI 1155
            + + + L +    A++ AFPE        D   + AS  E     FGDFQ N A+ L K 
Sbjct: 2    LRIAETLDNQLRAAMERAFPEAAPPAGGFDPQLAPASKPE-----FGDFQANGALPLAKP 56

Query: 1156 FKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK 1215
                          ++IA+ V  +L   PS A++  + ++A PGF+N+ L       +++
Sbjct: 57   LGQP---------PRAIATAVVEQLKAYPSFAELCLEPQIAGPGFINLTLRPERLAAEVQ 107

Query: 1216 DIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 1272
              + +   GV  P +     V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+
Sbjct: 108  ACLQDQRLGV--PAVQGGSPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVL 165

Query: 1273 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAY 1330
            RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  + 
Sbjct: 166  RLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQTTSR 225

Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 1390
            + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++E +V  LE 
Sbjct: 226  EEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLEGVVADLEA 285

Query: 1391 KGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKA 1441
             GLL +DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A
Sbjct: 286  TGLLVVDDGARCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGA 345

Query: 1442 DWIVYVTD 1449
              ++YVTD
Sbjct: 346  RRVIYVTD 353


>gi|428308161|ref|YP_007144986.1| arginyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
 gi|428249696|gb|AFZ15476.1| arginyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
          Length = 585

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/555 (44%), Positives = 348/555 (62%), Gaps = 36/555 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N  ++L K        K P  IAQ+I   +       P +        VA  G
Sbjct: 38   KFGDYQSNAPLSLTKRLG-----KPPRAIAQAIVQHLDINDICQPPV--------VAGAG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N  L   Y   Q+  I  N   GV+ P    K RV+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINFTLKPEYLEAQLNAIQANARLGVESP--KTKERVVVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
            GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT +    + DL + Y++
Sbjct: 143  GDCIARILEFWGHDVLRLNHVGDWGTQFGMLIAYLREAYPEALTTANALDLGDLVSLYRQ 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +KKRFDED+ F++ A Q VV LQ    D  +AW+++C+ SRR+FQ IYD L+V L ERGE
Sbjct: 203  AKKRFDEDQEFQELARQEVVKLQAGAEDTNRAWQLLCEQSRREFQVIYDLLDVHLQERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   +  ++  L+K GLL  + G   ++      ++   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPAVLEDLDKLGLLVENAGAMCVFLDGFTNKEGQPLPLIVKKSDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R RIE++ A+ I+YVTD GQ  HF    + A++A  + P+   +  V FG+VLGED 
Sbjct: 323  AALRYRIEQDGAERIIYVTDAGQANHFAQFFQVARRAEWI-PDDVEVVHVPFGLVLGEDN 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYAD 920
            KK KTRSG+TV+L +LLDE + R+   LK + +      TE  +    + V    +KYAD
Sbjct: 382  KKLKTRSGETVRLRDLLDEAIARARTDLKTRLQEEGRQETEEFIENVAKTVGISAVKYAD 441

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  +Y+FS+DKML  +GNTA Y+LYAY RI  I+R  GI+ ++L   A+   + L+
Sbjct: 442  LSQNRTSNYMFSYDKMLALQGNTAPYMLYAYVRIQGISRKGGIDFDNLGADAK---ILLQ 498

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             E E  LAK LL++++VL  V +DL  + LC+YL+++S  F++FYD C  ++ +   +I 
Sbjct: 499  EETELVLAKHLLQLSEVLREVEQDLMPNRLCQYLFELSQKFNQFYDRCPVLQAEEPQRI- 557

Query: 1041 TVHTGRLLLAEATAK 1055
                 RL L + TA+
Sbjct: 558  ----SRLSLCDLTAR 568



 Score =  273 bits (698), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 205/320 (64%), Gaps = 25/320 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N  ++L K        K P  IAQ+I   +       P +        VA  G
Sbjct: 38  KFGDYQSNAPLSLTKRLG-----KPPRAIAQAIVQHLDINDICQPPV--------VAGAG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N  L   Y   Q+  I  N   GV+ P    K RV+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINFTLKPEYLEAQLNAIQANARLGVESP--KTKERVVVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
           GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT +    + DL + Y++
Sbjct: 143 GDCIARILEFWGHDVLRLNHVGDWGTQFGMLIAYLREAYPEALTTANALDLGDLVSLYRQ 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +KKRFDED+ F++ A Q VV LQ    D  +AW+++C+ SRR+FQ IYD L+V L ERGE
Sbjct: 203 AKKRFDEDQEFQELARQEVVKLQAGAEDTNRAWQLLCEQSRREFQVIYDLLDVHLQERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   +  ++  L+K GLL  + G   ++      ++   +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPLLPAVLEDLDKLGLLVENAGAMCVFLDGFTNKEGQPLPLIVKKSDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTD 432
           AA+R RIE++ A+ I+YVTD
Sbjct: 323 AALRYRIEQDGAERIIYVTD 342



 Score =  273 bits (698), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 205/320 (64%), Gaps = 25/320 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N  ++L K        K P  IAQ+I   +       P +        VA  G
Sbjct: 38   KFGDYQSNAPLSLTKRLG-----KPPRAIAQAIVQHLDINDICQPPV--------VAGAG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N  L   Y   Q+  I  N   GV+ P    K RV+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINFTLKPEYLEAQLNAIQANARLGVESP--KTKERVVVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
            GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +P+ LT +    + DL + Y++
Sbjct: 143  GDCIARILEFWGHDVLRLNHVGDWGTQFGMLIAYLREAYPEALTTANALDLGDLVSLYRQ 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +KKRFDED+ F++ A Q VV LQ    D  +AW+++C+ SRR+FQ IYD L+V L ERGE
Sbjct: 203  AKKRFDEDQEFQELARQEVVKLQAGAEDTNRAWQLLCEQSRREFQVIYDLLDVHLQERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   +  ++  L+K GLL  + G   ++      ++   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNPLLPAVLEDLDKLGLLVENAGAMCVFLDGFTNKEGQPLPLIVKKSDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            AA+R RIE++ A+ I+YVTD
Sbjct: 323  AALRYRIEQDGAERIIYVTD 342


>gi|223997646|ref|XP_002288496.1| arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975604|gb|EED93932.1| arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 602

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/596 (42%), Positives = 355/596 (59%), Gaps = 44/596 (7%)

Query: 496  LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELAT 555
            +GD   + A+  E     FGD+QCN AM+L K         NP    +  AS +   L  
Sbjct: 22   IGDSMVTPATKPE-----FGDYQCNAAMSLAK-----SAGLNP----RECASKIVDGLKA 67

Query: 556  NPSLAKVIDKIEVAKPGFVNVFLSRVY----AGEQIKDIIVNG-VQPPTLNKKLRVLVDF 610
                  ++++ E+A PGF+N+     Y    AG+   D    G +  P    K +++VDF
Sbjct: 68   IEGFDTIMEEPEIAGPGFINLRFKDGYLAGAAGKMAMDAEDGGRLAIPVTKNKQKIIVDF 127

Query: 611  SSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPD 670
            SSPNIAKEMHVGHLRSTIIGDT+S LL + GHDV+RLNHVGDWGTQFGML+ HL+D+FP+
Sbjct: 128  SSPNIAKEMHVGHLRSTIIGDTLSNLLTFSGHDVLRLNHVGDWGTQFGMLVEHLRDEFPE 187

Query: 671  YL----TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDV 726
             L    +K+  + DL   YK +KKRFD DE FK RA + VV LQ  D +   AWE +C  
Sbjct: 188  ALDKESSKNVDLGDLVMLYKAAKKRFDVDEEFKVRAREGVVKLQAGDEEALAAWESLCAA 247

Query: 727  SRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GED 780
            SR ++QKIYD L++  L ERGESFY  ++  ++  LE +GL    +G   ++       D
Sbjct: 248  SRVEYQKIYDLLSIKGLNERGESFYNPYLVGVIEDLESQGLAVESEGATAVFLDGYTNRD 307

Query: 781  RGSIPMTIVKSDGGFTYDTSDLAAIRQRIE------EEKADWIVYVTDLGQGVHFRLLEE 834
               +PM + KSDGGF Y T+DLAAIR R++       EKAD ++YVTD GQ  HF ++  
Sbjct: 308  GSPLPMLVRKSDGGFNYATTDLAAIRHRVQLDPSDGGEKADRVLYVTDAGQSQHFEMVFA 367

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK- 893
             AKKAG +      ++ V FG+V GED KKF TRSGDTVKL +LLDE ++ + + +K + 
Sbjct: 368  AAKKAGFI-AEPISLEHVPFGLVQGEDGKKFATRSGDTVKLKDLLDEAVKIAGEDMKSRM 426

Query: 894  -NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
             N   EL+   L++  + V  G +KYADLS NR  +Y FS+ +ML   GNTA Y+LYAY 
Sbjct: 427  DNPDQELSEA-LNDVAKTVGIGAVKYADLSMNRESNYKFSYGRMLSLNGNTAPYMLYAYA 485

Query: 953  RIASIARTAGINSEDLRVA-AQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
            RI  I R A   SED +V   +++ + + H+ E  L + L+++ D+L  V  DL  + LC
Sbjct: 486  RICGIVRKATGQSEDTKVEWPEASDIIISHDAEKQLVRNLVKLPDILSEVETDLYPNRLC 545

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            +YL++ S  F++FY+NC     +AE     +   RL L   +A  ++   ++L I+
Sbjct: 546  DYLFETSQKFNQFYENCSV--NNAE--TPELKASRLSLCTVSAATIRLLMNLLGIQ 597



 Score =  275 bits (702), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 157/348 (45%), Positives = 209/348 (60%), Gaps = 35/348 (10%)

Query: 106 LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELAT 165
           +GD   + A+  E     FGD+QCN AM+L K         NP    +  AS +   L  
Sbjct: 22  IGDSMVTPATKPE-----FGDYQCNAAMSLAK-----SAGLNP----RECASKIVDGLKA 67

Query: 166 NPSLAKVIDKIEVAKPGFVNVFLSRVY----AGEQIKDIIVNG-VQPPTLNKKLRVLVDF 220
                 ++++ E+A PGF+N+     Y    AG+   D    G +  P    K +++VDF
Sbjct: 68  IEGFDTIMEEPEIAGPGFINLRFKDGYLAGAAGKMAMDAEDGGRLAIPVTKNKQKIIVDF 127

Query: 221 SSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPD 280
           SSPNIAKEMHVGHLRSTIIGDT+S LL + GHDV+RLNHVGDWGTQFGML+ HL+D+FP+
Sbjct: 128 SSPNIAKEMHVGHLRSTIIGDTLSNLLTFSGHDVLRLNHVGDWGTQFGMLVEHLRDEFPE 187

Query: 281 YL----TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDV 336
            L    +K+  + DL   YK +KKRFD DE FK RA + VV LQ  D +   AWE +C  
Sbjct: 188 ALDKESSKNVDLGDLVMLYKAAKKRFDVDEEFKVRAREGVVKLQAGDEEALAAWESLCAA 247

Query: 337 SRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GED 390
           SR ++QKIYD L++  L ERGESFY  ++  ++  LE +GL    +G   ++       D
Sbjct: 248 SRVEYQKIYDLLSIKGLNERGESFYNPYLVGVIEDLESQGLAVESEGATAVFLDGYTNRD 307

Query: 391 RGSIPMTIVKSDGGFTYDTSDLAAIRQRIE------EEKADWIVYVTD 432
              +PM + KSDGGF Y T+DLAAIR R++       EKAD ++YVTD
Sbjct: 308 GSPLPMLVRKSDGGFNYATTDLAAIRHRVQLDPSDGGEKADRVLYVTD 355



 Score =  275 bits (702), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 157/348 (45%), Positives = 209/348 (60%), Gaps = 35/348 (10%)

Query: 1123 LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELAT 1182
            +GD   + A+  E     FGD+QCN AM+L K         NP    +  AS +   L  
Sbjct: 22   IGDSMVTPATKPE-----FGDYQCNAAMSLAK-----SAGLNP----RECASKIVDGLKA 67

Query: 1183 NPSLAKVIDKIEVAKPGFVNVFLSRVY----AGEQIKDIIVNG-VQPPTLNKKLRVLVDF 1237
                  ++++ E+A PGF+N+     Y    AG+   D    G +  P    K +++VDF
Sbjct: 68   IEGFDTIMEEPEIAGPGFINLRFKDGYLAGAAGKMAMDAEDGGRLAIPVTKNKQKIIVDF 127

Query: 1238 SSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPD 1297
            SSPNIAKEMHVGHLRSTIIGDT+S LL + GHDV+RLNHVGDWGTQFGML+ HL+D+FP+
Sbjct: 128  SSPNIAKEMHVGHLRSTIIGDTLSNLLTFSGHDVLRLNHVGDWGTQFGMLVEHLRDEFPE 187

Query: 1298 YL----TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDV 1353
             L    +K+  + DL   YK +KKRFD DE FK RA + VV LQ  D +   AWE +C  
Sbjct: 188  ALDKESSKNVDLGDLVMLYKAAKKRFDVDEEFKVRAREGVVKLQAGDEEALAAWESLCAA 247

Query: 1354 SRRDFQKIYDRLNV-TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GED 1407
            SR ++QKIYD L++  L ERGESFY  ++  ++  LE +GL    +G   ++       D
Sbjct: 248  SRVEYQKIYDLLSIKGLNERGESFYNPYLVGVIEDLESQGLAVESEGATAVFLDGYTNRD 307

Query: 1408 RGSIPMTIVKSDGGFTYDTSDLAAIRQRIE------EEKADWIVYVTD 1449
               +PM + KSDGGF Y T+DLAAIR R++       EKAD ++YVTD
Sbjct: 308  GSPLPMLVRKSDGGFNYATTDLAAIRHRVQLDPSDGGEKADRVLYVTD 355


>gi|352095553|ref|ZP_08956567.1| Arginyl-tRNA synthetase [Synechococcus sp. WH 8016]
 gi|351678695|gb|EHA61840.1| Arginyl-tRNA synthetase [Synechococcus sp. WH 8016]
          Length = 590

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 259/611 (42%), Positives = 358/611 (58%), Gaps = 43/611 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPE---LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            + +   L      A+Q AFPE   L D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LRIAQALDTQLREAMQRAFPEVDALLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-SRVYAGEQIKDI 590
                       + IA  +   L  +P+   +  + ++A PGF+N+ +     A E    +
Sbjct: 57   A---------PRQIAGAIVEALQADPAFTALCLEPQIAGPGFINLTIRPECLAAEVSARL 107

Query: 591  IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
                +  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHV
Sbjct: 108  GDPRLGVPEVHNDSAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLNHV 167

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            GDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFDEDE F+  + + VV 
Sbjct: 168  GDWGTQFGMLITHLKQVAPETLNTADAVDLGDLVAFYREAKKRFDEDEAFQTTSREEVVK 227

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++  ++  L++  LL 
Sbjct: 228  LQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKEAVLLV 287

Query: 769  LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWIVY 819
             DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  ++Y
Sbjct: 288  TDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFAGGSDGDGARRVIY 347

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
            VTD GQ  HF  + + AK+A  + P   R++ V FG+V GED KK KTRSGDTV+L +LL
Sbjct: 348  VTDAGQANHFAGVFQVAKRANWI-PEDGRLEHVPFGLVQGEDGKKLKTRSGDTVRLRDLL 406

Query: 880  DEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            DE + R+   L+ + +  E    E  +      V    +KYADLS NR  +Y FSFD+ML
Sbjct: 407  DEAVERAEADLRRRLQEEERHEDEPFIRHVASTVGLAAVKYADLSQNRITNYQFSFDRML 466

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
              +GNTA YLLYA  RIA IAR  G    DL   A++  +     +E+AL + LL+ + V
Sbjct: 467  ALQGNTAPYLLYAVVRIAGIARKGG----DLE--AEAGMLQFSEPQEWALVRELLKFDAV 520

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V  +L  + LC YL+++S  F+ FYD    ++  AEGK     + RL L   TA  +
Sbjct: 521  IAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLK--AEGK---SLSSRLALCRLTADTL 575

Query: 1058 KKCFDILNIRT 1068
            K    +L I T
Sbjct: 576  KVGLGLLGIAT 586



 Score =  282 bits (722), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 159/363 (43%), Positives = 219/363 (60%), Gaps = 29/363 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPE---LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           + +   L      A+Q AFPE   L D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2   LRIAQALDTQLREAMQRAFPEVDALLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-SRVYAGEQIKDI 200
                      + IA  +   L  +P+   +  + ++A PGF+N+ +     A E    +
Sbjct: 57  A---------PRQIAGAIVEALQADPAFTALCLEPQIAGPGFINLTIRPECLAAEVSARL 107

Query: 201 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
               +  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHV
Sbjct: 108 GDPRLGVPEVHNDSAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLNHV 167

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           GDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFDEDE F+  + + VV 
Sbjct: 168 GDWGTQFGMLITHLKQVAPETLNTADAVDLGDLVAFYREAKKRFDEDEAFQTTSREEVVK 227

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++  ++  L++  LL 
Sbjct: 228 LQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKEAVLLV 287

Query: 379 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWIVY 429
            DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  ++Y
Sbjct: 288 TDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFAGGSDGDGARRVIY 347

Query: 430 VTD 432
           VTD
Sbjct: 348 VTD 350



 Score =  282 bits (722), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 159/363 (43%), Positives = 219/363 (60%), Gaps = 29/363 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPE---LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            + +   L      A+Q AFPE   L D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LRIAQALDTQLREAMQRAFPEVDALLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-SRVYAGEQIKDI 1217
                       + IA  +   L  +P+   +  + ++A PGF+N+ +     A E    +
Sbjct: 57   A---------PRQIAGAIVEALQADPAFTALCLEPQIAGPGFINLTIRPECLAAEVSARL 107

Query: 1218 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
                +  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHV
Sbjct: 108  GDPRLGVPEVHNDSAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLNHV 167

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            GDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFDEDE F+  + + VV 
Sbjct: 168  GDWGTQFGMLITHLKQVAPETLNTADAVDLGDLVAFYREAKKRFDEDEAFQTTSREEVVK 227

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++  ++  L++  LL 
Sbjct: 228  LQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKEAVLLV 287

Query: 1396 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWIVY 1446
             DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  ++Y
Sbjct: 288  TDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFAGGSDGDGARRVIY 347

Query: 1447 VTD 1449
            VTD
Sbjct: 348  VTD 350


>gi|76789190|ref|YP_328276.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237804804|ref|YP_002888958.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|109894982|sp|Q3KLP4.1|SYR_CHLTA RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|76167720|gb|AAX50728.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273104|emb|CAX10017.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|438690387|emb|CCP49644.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/7249]
 gi|438692845|emb|CCP47847.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/363]
          Length = 563

 Score =  434 bits (1117), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/596 (41%), Positives = 354/596 (59%), Gaps = 42/596 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 592
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LL
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
            E     AG L P+K     VGFG+VL    +KFKTRSG+ +KL ELLD  + ++ + L  
Sbjct: 339  EATCLAAGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESL-- 395

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
            K    +++  EL+     +    IKYADLS +R  DYVFSF+KML   GNTA+ LLYAY 
Sbjct: 396  KAHRPDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYV 455

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RI  I R  G+ S       Q  P+++    E ALA TLLR  ++L L  R+LC H L +
Sbjct: 456  RIQGIKRRMGLES-----LPQEEPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTD 510

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YLY ++  F+ F+ +C+    D++ +       RL L   T + +     +L ++T
Sbjct: 511  YLYALTNKFNAFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559



 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/362 (42%), Positives = 224/362 (61%), Gaps = 29/362 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3   TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 202
           K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55  KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVL 440
            K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD  +S H Q+L
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 441 QA 442
           +A
Sbjct: 339 EA 340



 Score =  277 bits (709), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 149/350 (42%), Positives = 216/350 (61%), Gaps = 27/350 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 1219
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328


>gi|166154668|ref|YP_001654786.1| arginyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155543|ref|YP_001653798.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335938|ref|ZP_07224182.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|339626132|ref|YP_004717611.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2c]
 gi|165930656|emb|CAP04153.1| arginyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931531|emb|CAP07107.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|339461264|gb|AEJ77767.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2c]
 gi|440526263|emb|CCP51747.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/8200/07]
 gi|440536088|emb|CCP61601.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/795]
 gi|440536981|emb|CCP62495.1| arginyl-tRNA synthetase [Chlamydia trachomatis L1/440/LN]
 gi|440537870|emb|CCP63384.1| arginyl-tRNA synthetase [Chlamydia trachomatis L1/1322/p2]
 gi|440538760|emb|CCP64274.1| arginyl-tRNA synthetase [Chlamydia trachomatis L1/115]
 gi|440539649|emb|CCP65163.1| arginyl-tRNA synthetase [Chlamydia trachomatis L1/224]
 gi|440540541|emb|CCP66055.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2/25667R]
 gi|440541429|emb|CCP66943.1| arginyl-tRNA synthetase [Chlamydia trachomatis L3/404/LN]
 gi|440542316|emb|CCP67830.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-2]
 gi|440543207|emb|CCP68721.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/Canada2]
 gi|440544098|emb|CCP69612.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/LST]
 gi|440544988|emb|CCP70502.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/Ams1]
 gi|440545878|emb|CCP71392.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/CV204]
 gi|440914140|emb|CCP90557.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/Ams2]
 gi|440915030|emb|CCP91447.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/Ams3]
 gi|440915921|emb|CCP92338.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/Canada1]
 gi|440916816|emb|CCP93233.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/Ams4]
 gi|440917706|emb|CCP94123.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/Ams5]
          Length = 563

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/596 (41%), Positives = 354/596 (59%), Gaps = 42/596 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 592
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LL
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
            E     AG L P+K     VGFG+VL    +KFKTRSG+ +KL ELLD  + ++ + L  
Sbjct: 339  EATCLAAGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESL-- 395

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
            K    +++  EL+     +    IKYADLS +R  DYVFSF+KML   GNTA+ LLYAY 
Sbjct: 396  KAHRPDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYV 455

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RI  I R  G+ S       Q  P+++    E ALA TLLR  ++L L  R+LC H L +
Sbjct: 456  RIQGIKRRMGLES-----LPQEGPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTD 510

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YLY ++  F+ F+ +C+    D++ +       RL L   T + +     +L ++T
Sbjct: 511  YLYALTNKFNTFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559



 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/362 (42%), Positives = 224/362 (61%), Gaps = 29/362 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3   TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 202
           K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55  KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVL 440
            K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD  +S H Q+L
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 441 QA 442
           +A
Sbjct: 339 EA 340



 Score =  277 bits (709), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 149/350 (42%), Positives = 216/350 (61%), Gaps = 27/350 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 1219
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328


>gi|384449168|ref|YP_005661770.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
 gi|269303449|gb|ACZ33549.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 561

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/591 (42%), Positives = 355/591 (60%), Gaps = 44/591 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            LS + + A+  AFP L D    +  + +++   FG +QCNDAM L ++ K     K P  
Sbjct: 8    LSVICSQAIAKAFPNLEDWAPEITPSTKEH---FGHYQCNDAMKLARVLK-----KAP-- 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---KDIIVNGVQP 597
              ++IA  + +EL   P        IE+A  GF+N   S V+  +Q+   +D +  G Q 
Sbjct: 58   --RAIAEAIVAELPQEP-----FSLIEIAGAGFINFTFSPVFLNQQLEHFRDALKLGFQ- 109

Query: 598  PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
              +++  ++++DFSSPNIAK+MHVGHLRSTIIGD+++R+  Y+GHDV+RLNH+GDWGT F
Sbjct: 110  --VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAF 167

Query: 658  GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            GMLI++LQ+   DY      + DL + YK++   F  DE FKKR+ Q VVALQ  DP   
Sbjct: 168  GMLISYLQENPCDY----SDLEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAI 223

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 777
              WE IC+ S + FQKIYD L++ + +RGESFY   + +++  LEKKGLL + +  K ++
Sbjct: 224  AIWEKICETSEKAFQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVF 283

Query: 778  GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAK 837
             E   SIP  + KSDGG+ Y T+DLAA+R RIEE+ AD I+ VTDLGQ +HF+LLE  A 
Sbjct: 284  HE-AFSIPFMVQKSDGGYNYATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAI 342

Query: 838  KAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT 897
             AG L P       VGFG+VL    KK KTRSG+ VKL ELLD  + ++ + L++     
Sbjct: 343  AAGYLQPGI--FSHVGFGLVLDPQGKKLKTRSGENVKLRELLDTAIEKAEEALRE--HRP 398

Query: 898  ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI 957
            ELT  E+ E    +    IKY+DLS +R  DYVFSF+KML   GNTA++LLYAY RI  I
Sbjct: 399  ELTDEEIQERAPVIGINAIKYSDLSSHRTSDYVFSFEKMLRFEGNTAMFLLYAYVRIQGI 458

Query: 958  ARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017
             R  GI+   L       P  ++   E  LA TLLR  + L    ++LC H L +YLY++
Sbjct: 459  KRRLGISQLSLE-----GPPEIQEPAEELLALTLLRFPEALESTIKELCPHFLTDYLYNL 513

Query: 1018 STAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +  F+ F+ +C+ I+     K       RL L   T +V+     +L ++T
Sbjct: 514  THKFNGFFRDCH-IQDSPYAK------SRLFLCALTEQVLATGMHLLGLKT 557



 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 160/359 (44%), Positives = 228/359 (63%), Gaps = 30/359 (8%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           LS + + A+  AFP L D    +  + +++   FG +QCNDAM L ++ K     K P  
Sbjct: 8   LSVICSQAIAKAFPNLEDWAPEITPSTKEH---FGHYQCNDAMKLARVLK-----KAP-- 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---KDIIVNGVQP 207
             ++IA  + +EL   P        IE+A  GF+N   S V+  +Q+   +D +  G Q 
Sbjct: 58  --RAIAEAIVAELPQEP-----FSLIEIAGAGFINFTFSPVFLNQQLEHFRDALKLGFQ- 109

Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
             +++  ++++DFSSPNIAK+MHVGHLRSTIIGD+++R+  Y+GHDV+RLNH+GDWGT F
Sbjct: 110 --VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAF 167

Query: 268 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           GMLI++LQ+   DY      + DL + YK++   F  DE FKKR+ Q VVALQ  DP   
Sbjct: 168 GMLISYLQENPCDY----SDLEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAI 223

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 387
             WE IC+ S + FQKIYD L++ + +RGESFY   + +++  LEKKGLL + +  K ++
Sbjct: 224 AIWEKICETSEKAFQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVF 283

Query: 388 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-HRSYH-QVLQAIA 444
            E   SIP  + KSDGG+ Y T+DLAA+R RIEE+ AD I+ VTD  +S H Q+L+A A
Sbjct: 284 HE-AFSIPFMVQKSDGGYNYATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATA 341



 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 154/345 (44%), Positives = 219/345 (63%), Gaps = 28/345 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            LS + + A+  AFP L D    +  + +++   FG +QCNDAM L ++ K     K P  
Sbjct: 8    LSVICSQAIAKAFPNLEDWAPEITPSTKEH---FGHYQCNDAMKLARVLK-----KAP-- 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---KDIIVNGVQP 1224
              ++IA  + +EL   P        IE+A  GF+N   S V+  +Q+   +D +  G Q 
Sbjct: 58   --RAIAEAIVAELPQEP-----FSLIEIAGAGFINFTFSPVFLNQQLEHFRDALKLGFQ- 109

Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
              +++  ++++DFSSPNIAK+MHVGHLRSTIIGD+++R+  Y+GHDV+RLNH+GDWGT F
Sbjct: 110  --VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAF 167

Query: 1285 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            GMLI++LQ+   DY      + DL + YK++   F  DE FKKR+ Q VVALQ  DP   
Sbjct: 168  GMLISYLQENPCDY----SDLEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAI 223

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 1404
              WE IC+ S + FQKIYD L++ + +RGESFY   + +++  LEKKGLL + +  K ++
Sbjct: 224  AIWEKICETSEKAFQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVF 283

Query: 1405 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             E   SIP  + KSDGG+ Y T+DLAA+R RIEE+ AD I+ VTD
Sbjct: 284  HE-AFSIPFMVQKSDGGYNYATTDLAAMRYRIEEDHADKIIIVTD 327


>gi|15605181|ref|NP_219967.1| arginyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|255311266|ref|ZP_05353836.1| arginyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317568|ref|ZP_05358814.1| arginyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|385240901|ref|YP_005808742.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|385243662|ref|YP_005811508.1| arginyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|385244542|ref|YP_005812386.1| arginyl-tRNA synthetase [Chlamydia trachomatis D-LC]
 gi|7674345|sp|O84460.1|SYR_CHLTR RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|3328887|gb|AAC68054.1| Arginyl tRNA Transferase [Chlamydia trachomatis D/UW-3/CX]
 gi|296436909|gb|ADH19079.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|297748585|gb|ADI51131.1| Arginyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749465|gb|ADI52143.1| Arginyl-tRNA synthetase [Chlamydia trachomatis D-LC]
 gi|440525376|emb|CCP50627.1| arginyl-tRNA synthetase [Chlamydia trachomatis K/SotonK1]
 gi|440528053|emb|CCP53537.1| arginyl-tRNA synthetase [Chlamydia trachomatis D/SotonD5]
 gi|440528943|emb|CCP54427.1| arginyl-tRNA synthetase [Chlamydia trachomatis D/SotonD6]
 gi|440532518|emb|CCP58028.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/SotonG1]
          Length = 563

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/596 (41%), Positives = 353/596 (59%), Gaps = 42/596 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++       
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 592
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LL
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
            E     AG L P+K     VGFG+VL    +KFKTRSG+ +KL ELLD  + ++ + LK 
Sbjct: 339  EATCLAAGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKA 397

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
                 +++  EL+     +    IKYADLS +R  DYVFSF+KML   GNTA+ LLYAY 
Sbjct: 398  HR--PDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYV 455

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RI  I R  G+ S       Q  P+++    E ALA TLLR  ++L L  R+LC H L +
Sbjct: 456  RIQGIKRRMGLES-----PPQEGPLAVHEPAEEALALTLLRFPEILDLTLRELCPHFLTD 510

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YLY ++  F+ F+ +C+    D++ +       RL L   T + +     +L ++T
Sbjct: 511  YLYALTNKFNAFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559



 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/362 (42%), Positives = 223/362 (61%), Gaps = 29/362 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++       
Sbjct: 3   TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 202
           K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55  KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVL 440
            K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD  +S H Q+L
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 441 QA 442
           +A
Sbjct: 339 EA 340



 Score =  277 bits (708), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 149/350 (42%), Positives = 215/350 (61%), Gaps = 27/350 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++       
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 1219
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328


>gi|33239664|ref|NP_874606.1| arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
            CCMP1375]
 gi|39932096|sp|Q7VE03.1|SYR_PROMA RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|33237189|gb|AAP99258.1| Arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
            CCMP1375]
          Length = 603

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 256/615 (41%), Positives = 371/615 (60%), Gaps = 50/615 (8%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVAS-TNEKYVH----KFGDFQCNDAMALCKIFKDKGEK 535
            L+     A+  AFPE   +        N + V     +FGDFQ N A+AL +I K     
Sbjct: 8    LNQQVQRALNTAFPEAASQVKESGDFLNPQLVAATKPEFGDFQINGALALARIIK----- 62

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK-----DI 590
            K+P    + IA ++  +L +N     +    E+A PGF+N+ L       +I      D+
Sbjct: 63   KSP----RQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCLINEITSRLNDDL 118

Query: 591  I-VNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
            + V  V    + KKL+ V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+L Y G+ V+RLN
Sbjct: 119  LGVPLVNDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILNYRGYKVIRLN 178

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            HVGDWGTQFGMLI HL++  P  LT +  I   +L  FYK++K+RFDEDE F++ +   V
Sbjct: 179  HVGDWGTQFGMLITHLKEVAPKALTTANVINLGNLVEFYKKAKQRFDEDEYFQQCSRNEV 238

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQR + +  KAWE++C+ SR++F KIYDRL + ++ERGESFY   ++ ++  L + GL
Sbjct: 239  VNLQRGNKESLKAWELLCEQSRKEFNKIYDRLKIEISERGESFYNPFLQGVIDDLTRSGL 298

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK----ADWI 817
            L  DDG K ++     G+D   +P+ I K+DGGF Y T+DLAAIR R++++     A  I
Sbjct: 299  LVEDDGAKCVFLNGINGKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRI 358

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +YVTD GQ  HF  + + AK+A  L P+ +R++ V FG+V GED KK KTRSG+TV+L +
Sbjct: 359  IYVTDSGQANHFAGVFQVAKRAKWL-PSSSRIEHVPFGLVQGEDGKKLKTRSGETVRLKD 417

Query: 878  LLDEGLRRS-LD---KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSF 933
            LLDE + R+ LD   +L ++NR    +   + +    +    +KYADLS NR  +Y FSF
Sbjct: 418  LLDEAISRAKLDIERRLNEENRKE--SQAFIEKVSNTIGIAAVKYADLSQNRITNYQFSF 475

Query: 934  DKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLR 993
            D+ML  +GNTA YLLYA  RIA I R  G    DL  +     ++    +E+ L + LL+
Sbjct: 476  DRMLALQGNTAPYLLYAVVRIAGINRKGG----DLHSSVNK--LNFSEPQEWRLIRELLK 529

Query: 994  MNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEAT 1053
             ++V++ V  +L  + LC YL+++S  F+ FYD    ++ +   +     + RL L + T
Sbjct: 530  FDEVIIAVEEELLPNRLCNYLFELSQVFNRFYDQIPVLKAEEPSR-----SCRLALCQLT 584

Query: 1054 AKVMKKCFDILNIRT 1068
               +KK  ++L I T
Sbjct: 585  GDTLKKGLNLLGIST 599



 Score =  283 bits (725), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 165/389 (42%), Positives = 235/389 (60%), Gaps = 32/389 (8%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVAS-TNEKYVH----KFGDFQCNDAMALCKIFKDKGEK 145
           L+     A+  AFPE   +        N + V     +FGDFQ N A+AL +I K     
Sbjct: 8   LNQQVQRALNTAFPEAASQVKESGDFLNPQLVAATKPEFGDFQINGALALARIIK----- 62

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK-----DI 200
           K+P    + IA ++  +L +N     +    E+A PGF+N+ L       +I      D+
Sbjct: 63  KSP----RQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCLINEITSRLNDDL 118

Query: 201 I-VNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
           + V  V    + KKL+ V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+L Y G+ V+RLN
Sbjct: 119 LGVPLVNDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILNYRGYKVIRLN 178

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           HVGDWGTQFGMLI HL++  P  LT +  I   +L  FYK++K+RFDEDE F++ +   V
Sbjct: 179 HVGDWGTQFGMLITHLKEVAPKALTTANVINLGNLVEFYKKAKQRFDEDEYFQQCSRNEV 238

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQR + +  KAWE++C+ SR++F KIYDRL + ++ERGESFY   ++ ++  L + GL
Sbjct: 239 VNLQRGNKESLKAWELLCEQSRKEFNKIYDRLKIEISERGESFYNPFLQGVIDDLTRSGL 298

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK----ADWI 427
           L  DDG K ++     G+D   +P+ I K+DGGF Y T+DLAAIR R++++     A  I
Sbjct: 299 LVEDDGAKCVFLNGINGKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRI 358

Query: 428 VYVTDHRSYHQVLQAIAEEEKKQGISSSS 456
           +YVTD    +         ++ + + SSS
Sbjct: 359 IYVTDSGQANHFAGVFQVAKRAKWLPSSS 387



 Score =  283 bits (724), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 162/365 (44%), Positives = 227/365 (62%), Gaps = 32/365 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVAS-TNEKYVH----KFGDFQCNDAMALCKIFKDKGEK 1162
            L+     A+  AFPE   +        N + V     +FGDFQ N A+AL +I K     
Sbjct: 8    LNQQVQRALNTAFPEAASQVKESGDFLNPQLVAATKPEFGDFQINGALALARIIK----- 62

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK-----DI 1217
            K+P    + IA ++  +L +N     +    E+A PGF+N+ L       +I      D+
Sbjct: 63   KSP----RQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCLINEITSRLNDDL 118

Query: 1218 I-VNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
            + V  V    + KKL+ V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+L Y G+ V+RLN
Sbjct: 119  LGVPLVNDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILNYRGYKVIRLN 178

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            HVGDWGTQFGMLI HL++  P  LT +  I   +L  FYK++K+RFDEDE F++ +   V
Sbjct: 179  HVGDWGTQFGMLITHLKEVAPKALTTANVINLGNLVEFYKKAKQRFDEDEYFQQCSRNEV 238

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQR + +  KAWE++C+ SR++F KIYDRL + ++ERGESFY   ++ ++  L + GL
Sbjct: 239  VNLQRGNKESLKAWELLCEQSRKEFNKIYDRLKIEISERGESFYNPFLQGVIDDLTRSGL 298

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK----ADWI 1444
            L  DDG K ++     G+D   +P+ I K+DGGF Y T+DLAAIR R++++     A  I
Sbjct: 299  LVEDDGAKCVFLNGINGKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRI 358

Query: 1445 VYVTD 1449
            +YVTD
Sbjct: 359  IYVTD 363


>gi|88809846|ref|ZP_01125352.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786230|gb|EAR17391.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 590

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 251/597 (42%), Positives = 356/597 (59%), Gaps = 45/597 (7%)

Query: 488  AVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI 545
            A+Q A PE   G     VA++  +    FGDFQ N A+ L K  K            + I
Sbjct: 15   AMQRALPEADAGLDPQLVAASKPE----FGDFQANGALPLAKPLKQA---------PRQI 61

Query: 546  ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNK 602
            A+ +  +L  +P+   +  + ++A PGF+N+ +       ++   + +   GV  P +  
Sbjct: 62   ATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARLGDERLGV--PAVVN 119

Query: 603  KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 662
            +  V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHVGDWGTQFGMLI 
Sbjct: 120  EAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLIT 179

Query: 663  HLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
            HL+   P+ L  +  +   DL AFY+E+KKRFDEDE F+  + + VV LQ  DP   KAW
Sbjct: 180  HLKQVAPEALETADAVDLGDLVAFYREAKKRFDEDEAFQFTSREEVVKLQGGDPVSLKAW 239

Query: 721  EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--- 777
             ++CD SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   LL  DDG + ++   
Sbjct: 240  GLLCDQSRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAECVFLEG 299

Query: 778  --GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWIVYVTDLGQGVHFRL 831
              G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  ++YVTD GQ  HF  
Sbjct: 300  VQGKDGNPLPVIVRKSDGGFNYATTDLAAIRYRFGAVPDGDGARRVIYVTDAGQANHFAG 359

Query: 832  LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
            + + A +AG + P+  R++ V FG+V GED KK KTRSGDTV+L +LLDE + R+   L+
Sbjct: 360  VFQVATRAGWI-PDGARLEHVPFGLVQGEDGKKLKTRSGDTVRLRDLLDEAVERAEADLR 418

Query: 892  DKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
             + +  E + +E  +      V    +KYADLS NR  +Y FSFD+ML  +GNTA YLLY
Sbjct: 419  SRLKAEERSESEEFIHHVAATVGLAAVKYADLSQNRITNYQFSFDRMLALQGNTAPYLLY 478

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A  RIA IAR  G    DL V+  +  +     +E+AL + LL+ + V+  V  +L  + 
Sbjct: 479  AVVRIAGIARKGG----DLEVS--TAQLQFSEPQEWALVRELLKFDVVIAEVEEELLPNR 532

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            LC YL+++S  F+ FYD    ++ ++E         RL L   TA  +K    +L I
Sbjct: 533  LCSYLFELSQVFNRFYDQVPVLKAESEA-----LPSRLALCRLTADTLKAGLGLLGI 584



 Score =  277 bits (708), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 155/351 (44%), Positives = 217/351 (61%), Gaps = 31/351 (8%)

Query: 98  AVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI 155
           A+Q A PE   G     VA++  +    FGDFQ N A+ L K  K            + I
Sbjct: 15  AMQRALPEADAGLDPQLVAASKPE----FGDFQANGALPLAKPLKQA---------PRQI 61

Query: 156 ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNK 212
           A+ +  +L  +P+   +  + ++A PGF+N+ +       ++   + +   GV  P +  
Sbjct: 62  ATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARLGDERLGV--PAVVN 119

Query: 213 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 272
           +  V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHVGDWGTQFGMLI 
Sbjct: 120 EAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLIT 179

Query: 273 HLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 330
           HL+   P+ L  +  +   DL AFY+E+KKRFDEDE F+  + + VV LQ  DP   KAW
Sbjct: 180 HLKQVAPEALETADAVDLGDLVAFYREAKKRFDEDEAFQFTSREEVVKLQGGDPVSLKAW 239

Query: 331 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--- 387
            ++CD SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   LL  DDG + ++   
Sbjct: 240 GLLCDQSRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAECVFLEG 299

Query: 388 --GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWIVYVTD 432
             G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  ++YVTD
Sbjct: 300 VQGKDGNPLPVIVRKSDGGFNYATTDLAAIRYRFGAVPDGDGARRVIYVTD 350



 Score =  277 bits (708), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 155/351 (44%), Positives = 217/351 (61%), Gaps = 31/351 (8%)

Query: 1115 AVQVAFPEL--GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI 1172
            A+Q A PE   G     VA++  +    FGDFQ N A+ L K  K            + I
Sbjct: 15   AMQRALPEADAGLDPQLVAASKPE----FGDFQANGALPLAKPLKQA---------PRQI 61

Query: 1173 ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNK 1229
            A+ +  +L  +P+   +  + ++A PGF+N+ +       ++   + +   GV  P +  
Sbjct: 62   ATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARLGDERLGV--PAVVN 119

Query: 1230 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 1289
            +  V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHVGDWGTQFGMLI 
Sbjct: 120  EAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLIT 179

Query: 1290 HLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            HL+   P+ L  +  +   DL AFY+E+KKRFDEDE F+  + + VV LQ  DP   KAW
Sbjct: 180  HLKQVAPEALETADAVDLGDLVAFYREAKKRFDEDEAFQFTSREEVVKLQGGDPVSLKAW 239

Query: 1348 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--- 1404
             ++CD SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   LL  DDG + ++   
Sbjct: 240  GLLCDQSRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAECVFLEG 299

Query: 1405 --GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWIVYVTD 1449
              G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  ++YVTD
Sbjct: 300  VQGKDGNPLPVIVRKSDGGFNYATTDLAAIRYRFGAVPDGDGARRVIYVTD 350


>gi|440533411|emb|CCP58921.1| arginyl-tRNA synthetase [Chlamydia trachomatis Ia/SotonIa1]
 gi|440534305|emb|CCP59815.1| arginyl-tRNA synthetase [Chlamydia trachomatis Ia/SotonIa3]
          Length = 563

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/596 (41%), Positives = 353/596 (59%), Gaps = 42/596 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++       
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 592
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             K ++ E   SIP+ + KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LL
Sbjct: 280  AKCVFHEAF-SIPLMVQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
            E     AG L P+K     VGFG+VL    +KFKTRSG+ +KL ELLD  + ++ + LK 
Sbjct: 339  EATCLAAGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKA 397

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
                 +++  EL+     +    IKYADLS +R  DYVFSF+KML   GNTA+ LLYAY 
Sbjct: 398  HR--PDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYV 455

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RI  I R  G+ S       Q  P+++    E ALA TLLR  ++L L  R+LC H L +
Sbjct: 456  RIQGIKRRMGLES-----PPQEGPLAVHEPAEEALALTLLRFPEILDLTLRELCPHFLTD 510

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YLY ++  F+ F+ +C+    D++ +       RL L   T + +     +L ++T
Sbjct: 511  YLYALTNKFNAFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559



 Score =  277 bits (709), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 153/362 (42%), Positives = 223/362 (61%), Gaps = 29/362 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++       
Sbjct: 3   TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 202
           K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55  KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVL 440
            K ++ E   SIP+ + KSDGG+ Y T+D+AA+R RI++++AD I+ VTD  +S H Q+L
Sbjct: 280 AKCVFHEAF-SIPLMVQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 441 QA 442
           +A
Sbjct: 339 EA 340



 Score =  276 bits (706), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 148/350 (42%), Positives = 215/350 (61%), Gaps = 27/350 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++       
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 1219
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             K ++ E   SIP+ + KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 280  AKCVFHEAF-SIPLMVQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328


>gi|385239977|ref|YP_005807819.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|385242755|ref|YP_005810594.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9301]
 gi|385246364|ref|YP_005815186.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|296435982|gb|ADH18156.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437843|gb|ADH20004.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140343|gb|ADH97101.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 563

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/596 (41%), Positives = 353/596 (59%), Gaps = 42/596 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++       
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 592
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LL
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
            E     AG L P+K     VGFG+VL    +KFKTRSG+ +KL ELLD  + ++ + LK 
Sbjct: 339  EATCLAAGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKA 397

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
                 +++  EL+     +    IKYADLS +R  DYVFSF+KML   GNTA+ LLYAY 
Sbjct: 398  HR--PDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYV 455

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RI  I R  G+ S       Q  P+++    E ALA TLLR  ++L L  R+LC H L +
Sbjct: 456  RIQGIKRRMGLES-----PPQEGPLAVHGPAEEALALTLLRFPEILDLTLRELCPHFLTD 510

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YLY ++  F+ F+ +C+    D++ +       RL L   T + +     +L ++T
Sbjct: 511  YLYALTNKFNAFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559



 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/362 (42%), Positives = 223/362 (61%), Gaps = 29/362 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++       
Sbjct: 3   TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 202
           K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55  KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVL 440
            K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD  +S H Q+L
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 441 QA 442
           +A
Sbjct: 339 EA 340



 Score =  276 bits (707), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 149/350 (42%), Positives = 215/350 (61%), Gaps = 27/350 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++       
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 1219
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328


>gi|308158755|gb|EFO61320.1| Arginyl-tRNA synthetase [Giardia lamblia P15]
          Length = 621

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/574 (42%), Positives = 344/574 (59%), Gaps = 25/574 (4%)

Query: 513  KFGDFQCNDAMALCKIFKD---KGEKKNPFDIAQSIAS---VVTSELATNPSLAKVIDKI 566
            K+G +Q N  M + K+ KD        NP +++         V  + A      K I+ +
Sbjct: 49   KYGHYQFNSTMGIAKLIKDLHYDALPSNPAELSGLFTQAMLCVQDKYAEAKGCPKPIEAV 108

Query: 567  EVAKPGFVNVFLSRVYAGEQIKDIIVN---GV--QPPTLNKKLRVLVDFSSPNIAKEMHV 621
             +A   F+N+ L+  Y   +  DI +    G   +PPTL  K  V VDFSSPN+AK MHV
Sbjct: 109  NIAG-SFINIVLTPEYLLSKCFDIYMAVPFGALPKPPTLPGKC-VAVDFSSPNVAKSMHV 166

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----- 676
            GHLRSTIIGD+I RL EY+ + V R+NHVGDWGTQFGMLI +L D  P+    +      
Sbjct: 167  GHLRSTIIGDSICRLYEYVKYKVHRINHVGDWGTQFGMLITYLTDMHPEIADAAAHCKRI 226

Query: 677  ---PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQK 733
               PI +L AFYK++K+RFD D  F+KRAY+ VV LQR +      W  ICD+SR +FQ+
Sbjct: 227  TMLPIDNLVAFYKKAKERFDSDPDFQKRAYEAVVKLQRLNLAEFYLWYKICDISRHEFQR 286

Query: 734  IYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDG 793
            IYDRL++ + E GES Y+  +   V  L++  L ++ D   ++  E     P+ IVKSDG
Sbjct: 287  IYDRLDIKIDEFGESSYKFKLGTTVARLKRLHLTQMSDKATVIPIEGM-DYPLIIVKSDG 345

Query: 794  GFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
            GFTYDT+D+AAI  R +   AD  VYV D GQ  HF L+ + A+KAG +  N+     V 
Sbjct: 346  GFTYDTTDMAAIYHRTQVLHADKCVYVVDAGQSSHFDLVFKAAEKAGWITKNQAV--HVP 403

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAY 913
            FGVVLG D K+ KTR+G+TVKL +LLDE +  S+  L+++NR  E +  E+    +AV Y
Sbjct: 404  FGVVLGNDGKRLKTRAGETVKLEDLLDEAVTESMRLLEERNRDQEFSQEEMRRVAEAVGY 463

Query: 914  GCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQ 973
            G +KYADLS +R  DY +   +ML+ +GNTA YLLY++TRI+SI R AG+N E+L  +  
Sbjct: 464  GAVKYADLSSHRIKDYKYDPKRMLNLKGNTAAYLLYSFTRISSICRKAGVNREELYTSDT 523

Query: 974  STPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK 1033
               +S+    E  L   LL+++D ++    DLC H +C+++Y +++A+++FY+ C  IE 
Sbjct: 524  LKNLSITDPSEINLLVALLKVHDTILFTLEDLCPHRICDWVYSVASAYTDFYEKCRVIET 583

Query: 1034 DAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
               G     +  RL L E T + ++  F +L IR
Sbjct: 584  SESGD-SICNKSRLALCEMTRQSLRLAFHLLGIR 616



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/394 (38%), Positives = 217/394 (55%), Gaps = 28/394 (7%)

Query: 123 KFGDFQCNDAMALCKIFKD---KGEKKNPFDIAQSIAS---VVTSELATNPSLAKVIDKI 176
           K+G +Q N  M + K+ KD        NP +++         V  + A      K I+ +
Sbjct: 49  KYGHYQFNSTMGIAKLIKDLHYDALPSNPAELSGLFTQAMLCVQDKYAEAKGCPKPIEAV 108

Query: 177 EVAKPGFVNVFLSRVYAGEQIKDIIVN---GV--QPPTLNKKLRVLVDFSSPNIAKEMHV 231
            +A   F+N+ L+  Y   +  DI +    G   +PPTL  K  V VDFSSPN+AK MHV
Sbjct: 109 NIAG-SFINIVLTPEYLLSKCFDIYMAVPFGALPKPPTLPGKC-VAVDFSSPNVAKSMHV 166

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----- 286
           GHLRSTIIGD+I RL EY+ + V R+NHVGDWGTQFGMLI +L D  P+    +      
Sbjct: 167 GHLRSTIIGDSICRLYEYVKYKVHRINHVGDWGTQFGMLITYLTDMHPEIADAAAHCKRI 226

Query: 287 ---PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQK 343
              PI +L AFYK++K+RFD D  F+KRAY+ VV LQR +      W  ICD+SR +FQ+
Sbjct: 227 TMLPIDNLVAFYKKAKERFDSDPDFQKRAYEAVVKLQRLNLAEFYLWYKICDISRHEFQR 286

Query: 344 IYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDG 403
           IYDRL++ + E GES Y+  +   V  L++  L ++ D   ++  E     P+ IVKSDG
Sbjct: 287 IYDRLDIKIDEFGESSYKFKLGTTVARLKRLHLTQMSDKATVIPIEGM-DYPLIIVKSDG 345

Query: 404 GFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIAEEE----KKQGISSSSS 457
           GFTYDT+D+AAI  R +   AD  VYV D    S+  ++   AE+     K Q +     
Sbjct: 346 GFTYDTTDMAAIYHRTQVLHADKCVYVVDAGQSSHFDLVFKAAEKAGWITKNQAVHVPFG 405

Query: 458 SQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQV 491
                  K++     + + + D L +  T ++++
Sbjct: 406 VVLGNDGKRLKTRAGETVKLEDLLDEAVTESMRL 439



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 143/329 (43%), Positives = 193/329 (58%), Gaps = 22/329 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKD---KGEKKNPFDIAQSIAS---VVTSELATNPSLAKVIDKI 1193
            K+G +Q N  M + K+ KD        NP +++         V  + A      K I+ +
Sbjct: 49   KYGHYQFNSTMGIAKLIKDLHYDALPSNPAELSGLFTQAMLCVQDKYAEAKGCPKPIEAV 108

Query: 1194 EVAKPGFVNVFLSRVYAGEQIKDIIVN---GV--QPPTLNKKLRVLVDFSSPNIAKEMHV 1248
             +A   F+N+ L+  Y   +  DI +    G   +PPTL  K  V VDFSSPN+AK MHV
Sbjct: 109  NIAG-SFINIVLTPEYLLSKCFDIYMAVPFGALPKPPTLPGKC-VAVDFSSPNVAKSMHV 166

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----- 1303
            GHLRSTIIGD+I RL EY+ + V R+NHVGDWGTQFGMLI +L D  P+    +      
Sbjct: 167  GHLRSTIIGDSICRLYEYVKYKVHRINHVGDWGTQFGMLITYLTDMHPEIADAAAHCKRI 226

Query: 1304 ---PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQK 1360
               PI +L AFYK++K+RFD D  F+KRAY+ VV LQR +      W  ICD+SR +FQ+
Sbjct: 227  TMLPIDNLVAFYKKAKERFDSDPDFQKRAYEAVVKLQRLNLAEFYLWYKICDISRHEFQR 286

Query: 1361 IYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDG 1420
            IYDRL++ + E GES Y+  +   V  L++  L ++ D   ++  E     P+ IVKSDG
Sbjct: 287  IYDRLDIKIDEFGESSYKFKLGTTVARLKRLHLTQMSDKATVIPIEGM-DYPLIIVKSDG 345

Query: 1421 GFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            GFTYDT+D+AAI  R +   AD  VYV D
Sbjct: 346  GFTYDTTDMAAIYHRTQVLHADKCVYVVD 374


>gi|376282463|ref|YP_005156289.1| arginyl-tRNA synthetase [Chlamydia trachomatis A2497]
 gi|385270153|ref|YP_005813313.1| arginyl-tRNA synthetase [Chlamydia trachomatis A2497]
 gi|347975293|gb|AEP35314.1| Arginyl-tRNA synthetase [Chlamydia trachomatis A2497]
 gi|371908493|emb|CAX09123.1| arginyl-tRNA synthetase [Chlamydia trachomatis A2497]
 gi|438691472|emb|CCP48746.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/5291]
          Length = 563

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/596 (41%), Positives = 353/596 (59%), Gaps = 42/596 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 592
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LL
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
            E      G L P+K     VGFG+VL    +KFKTRSG+ +KL ELLD  + ++ + L  
Sbjct: 339  EATCLAVGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESL-- 395

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
            K    +++  EL+     +    IKYADLS +R  DYVFSF+KML   GNTA+ LLYAY 
Sbjct: 396  KAHRPDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYV 455

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RI  I R  G+ S       Q  P+++    E ALA TLLR  ++L L  R+LC H L +
Sbjct: 456  RIQGIKRRMGLES-----LPQEEPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTD 510

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YLY ++  F+ F+ +C+    D++ +       RL L   T + +     +L ++T
Sbjct: 511  YLYALTNKFNAFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559



 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/362 (42%), Positives = 224/362 (61%), Gaps = 29/362 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3   TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 202
           K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55  KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVL 440
            K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD  +S H Q+L
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 441 QA 442
           +A
Sbjct: 339 EA 340



 Score =  277 bits (709), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 149/350 (42%), Positives = 216/350 (61%), Gaps = 27/350 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 1219
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328


>gi|255348827|ref|ZP_05380834.1| arginyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503367|ref|ZP_05381757.1| arginyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507045|ref|ZP_05382684.1| arginyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|385241832|ref|YP_005809672.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|385245439|ref|YP_005814262.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|386262811|ref|YP_005816090.1| arginyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|389858150|ref|YP_006360392.1| arginyl-tRNA synthetase [Chlamydia trachomatis F/SW4]
 gi|389859026|ref|YP_006361267.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/SW3]
 gi|389859902|ref|YP_006362142.1| arginyl-tRNA synthetase [Chlamydia trachomatis F/SW5]
 gi|289525499|emb|CBJ14976.1| arginyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435055|gb|ADH17233.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438775|gb|ADH20928.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|380249222|emb|CCE14514.1| arginyl-tRNA synthetase [Chlamydia trachomatis F/SW5]
 gi|380250097|emb|CCE13625.1| arginyl-tRNA synthetase [Chlamydia trachomatis F/SW4]
 gi|380250975|emb|CCE12736.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/SW3]
 gi|440527161|emb|CCP52645.1| arginyl-tRNA synthetase [Chlamydia trachomatis D/SotonD1]
 gi|440529835|emb|CCP55319.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/SotonE4]
 gi|440530734|emb|CCP56218.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/SotonE8]
 gi|440531625|emb|CCP57135.1| arginyl-tRNA synthetase [Chlamydia trachomatis F/SotonF3]
 gi|440535202|emb|CCP60712.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/Bour]
          Length = 563

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/596 (41%), Positives = 354/596 (59%), Gaps = 42/596 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 592
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 593  NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LL
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
            E     AG L P+K     VGFG+VL    +KFKTRSG+ +KL ELLD  + ++ + L  
Sbjct: 339  EATCLAAGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESL-- 395

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
            K    +++  +L+     +    IKYADLS +R  DYVFSF+KML   GNTA+ LLYAY 
Sbjct: 396  KAHRPDISEEDLAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYV 455

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RI  I R  G+ S       Q  P+++    E ALA TLLR  ++L L  R+LC H L +
Sbjct: 456  RIQGIKRRMGLES-----LPQEGPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTD 510

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YLY ++  F+ F+ +C+    D++ +       RL L   T + +     +L ++T
Sbjct: 511  YLYALTNKFNTFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559



 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/362 (42%), Positives = 224/362 (61%), Gaps = 29/362 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3   TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 202
           K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55  KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVL 440
            K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD  +S H Q+L
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338

Query: 441 QA 442
           +A
Sbjct: 339 EA 340



 Score =  277 bits (709), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 149/350 (42%), Positives = 216/350 (61%), Gaps = 27/350 (7%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            ++  +L+ + + A+  AFPEL + T  +  + +++   FG +QCNDAM L ++ +     
Sbjct: 3    TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 1219
            K+P  IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + 
Sbjct: 55   KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105

Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            NG +  +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GD
Sbjct: 106  NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGT FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  
Sbjct: 163  WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            D      W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG
Sbjct: 220  DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             K ++ E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 280  AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328


>gi|440680763|ref|YP_007155558.1| arginyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
 gi|428677882|gb|AFZ56648.1| arginyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
          Length = 585

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/568 (43%), Positives = 352/568 (61%), Gaps = 36/568 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGDFQ N A++L K    +          ++IAS +  +L     ++ + +  E+A PG
Sbjct: 38   KFGDFQANVALSLSKKLGMQ---------PRAIASAIVEKL----DISDICEPPEIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   Y   Q+  I  +   GV  P      + +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLQTSYLEAQLNAIKADPRLGV--PKAKNPQKEIVDFSSPNIAKEMHVGHLRSTII 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
            GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P  LT +    I DL  FY++
Sbjct: 143  GDCIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPAALTTADALDIGDLVNFYRQ 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
            +K+RFD D  F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD LNV L ERGE
Sbjct: 203  AKQRFDADADFQETARQEVVRLQAGAEDTLHAWKLLCEQSRKEFQIIYDLLNVKLIERGE 262

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   +  +V  LE  GLL  + G K ++       +   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNSFLSAVVEDLETSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDL 322

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            A++R RI++++A  I+YVTD GQ  HF    + AKKA  + P+   +  V FG+VLG+D 
Sbjct: 323  ASLRYRIQKDQAKRIIYVTDSGQTNHFAQFMQVAKKANWI-PDDVELVHVPFGLVLGDDG 381

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYAD 920
            KKFKTRSGDTV+L +LLDE + R+   L+ + +      TE  ++     V    +KYAD
Sbjct: 382  KKFKTRSGDTVRLRDLLDEAVSRTRADLEARLKEEGREETEEFINNVADVVGISAVKYAD 441

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  +YVFS+DKML  +GNTA Y++YAY R   I+R   I+  +L   A+   + L 
Sbjct: 442  LSQNRTSNYVFSYDKMLALKGNTAPYMIYAYVRTQGISREGNIDFGNLGADAK---IILR 498

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             + E  LAK LL++++V+  V +DL  + LC+Y+Y++S  F++FY+NC  ++ +     +
Sbjct: 499  EDTELTLAKHLLQLDEVISEVEQDLLPNRLCDYIYNLSDKFNKFYENCPVLKSE-----E 553

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             + T RL+L + TAK +K   D+L I+ 
Sbjct: 554  PIRTSRLMLCDLTAKTLKLGLDLLGIKV 581



 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/340 (43%), Positives = 208/340 (61%), Gaps = 25/340 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGDFQ N A++L K    +          ++IAS +  +L     ++ + +  E+A PG
Sbjct: 38  KFGDFQANVALSLSKKLGMQ---------PRAIASAIVEKL----DISDICEPPEIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   Y   Q+  I  +   GV  P      + +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85  FINLKLQTSYLEAQLNAIKADPRLGV--PKAKNPQKEIVDFSSPNIAKEMHVGHLRSTII 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
           GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P  LT +    I DL  FY++
Sbjct: 143 GDCIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPAALTTADALDIGDLVNFYRQ 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
           +K+RFD D  F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD LNV L ERGE
Sbjct: 203 AKQRFDADADFQETARQEVVRLQAGAEDTLHAWKLLCEQSRKEFQIIYDLLNVKLIERGE 262

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   +  +V  LE  GLL  + G K ++       +   +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNSFLSAVVEDLETSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDL 322

Query: 413 AAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGI 452
           A++R RI++++A  I+YVTD    +   Q +   +K   I
Sbjct: 323 ASLRYRIQKDQAKRIIYVTDSGQTNHFAQFMQVAKKANWI 362



 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/320 (45%), Positives = 202/320 (63%), Gaps = 25/320 (7%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGDFQ N A++L K    +          ++IAS +  +L     ++ + +  E+A PG
Sbjct: 38   KFGDFQANVALSLSKKLGMQ---------PRAIASAIVEKL----DISDICEPPEIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   Y   Q+  I  +   GV  P      + +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85   FINLKLQTSYLEAQLNAIKADPRLGV--PKAKNPQKEIVDFSSPNIAKEMHVGHLRSTII 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
            GD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++  P  LT +    I DL  FY++
Sbjct: 143  GDCIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPAALTTADALDIGDLVNFYRQ 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
            +K+RFD D  F++ A Q VV LQ    D   AW+++C+ SR++FQ IYD LNV L ERGE
Sbjct: 203  AKQRFDADADFQETARQEVVRLQAGAEDTLHAWKLLCEQSRKEFQIIYDLLNVKLIERGE 262

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   +  +V  LE  GLL  + G K ++       +   +P+ + KSDGG+ Y T+DL
Sbjct: 263  SFYNSFLSAVVEDLETSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDL 322

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            A++R RI++++A  I+YVTD
Sbjct: 323  ASLRYRIQKDQAKRIIYVTD 342


>gi|87123553|ref|ZP_01079404.1| arginyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86169273|gb|EAQ70529.1| arginyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 605

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/575 (44%), Positives = 353/575 (61%), Gaps = 37/575 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGDFQ N A+ L K  K            + IAS +  +L  +PS + +  +  +A PG
Sbjct: 45   EFGDFQANGALPLAKPLKQA---------PRQIASAIVEQLQADPSFSALCLEPVIAGPG 95

Query: 573  FVNVFL--SRVYA--GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+ L   R+ A   E++ D  + GV  P +     V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 96   FINLTLRPERLAAEVAERLGDPRL-GV--PAVQGSAPVVVDFSSPNIAKEMHVGHLRSTI 152

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYK 686
            IGD+++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+
Sbjct: 153  IGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYR 212

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 746
            E+KKRFD+DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERG
Sbjct: 213  EAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIHLSERG 272

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 801
            ESFY  ++E +V  LE  GLL +DDG + ++     G+D   +P+ + KSDGGF Y T+D
Sbjct: 273  ESFYNPYLEGVVTDLEAAGLLAVDDGARCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTD 332

Query: 802  LAAIRQRI----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
            LAAIR R     + + A  ++YVTD GQ  HF  + + A++AG + P+  R++ V FG+V
Sbjct: 333  LAAIRYRFGGAPDGDGARRVIYVTDAGQANHFAGVFQVARRAGWV-PDDGRLEHVPFGLV 391

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGC 915
             G+D KK KTR+GDTV+L +LLDE + R+   L+ +      +  E  +      V    
Sbjct: 392  QGDDGKKLKTRAGDTVRLRDLLDEAVERAEADLRRRLEEEGRSEDEAFIQHVATTVGLAA 451

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
            +KYADLS NR  +Y FSFD+ML  +GNTA YLLYA  RIA IAR  G  +     AA  +
Sbjct: 452  VKYADLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGGDLALAGAGAAAGS 511

Query: 976  PVSL--EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK 1033
               L     +E+AL + LLR + V+  V  +L  + LC YL+++S  F+ FYD    ++ 
Sbjct: 512  GSDLHFNEPQEWALVRELLRFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYDQVPVLK- 570

Query: 1034 DAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             AEG   T+ + RL L   TA  +K    +L I T
Sbjct: 571  -AEG--ATLRS-RLALCRLTADTLKCGLGLLGIAT 601



 Score =  289 bits (740), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 157/325 (48%), Positives = 213/325 (65%), Gaps = 27/325 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGDFQ N A+ L K  K            + IAS +  +L  +PS + +  +  +A PG
Sbjct: 45  EFGDFQANGALPLAKPLKQA---------PRQIASAIVEQLQADPSFSALCLEPVIAGPG 95

Query: 183 FVNVFL--SRVYA--GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+ L   R+ A   E++ D  + GV  P +     V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 96  FINLTLRPERLAAEVAERLGDPRL-GV--PAVQGSAPVVVDFSSPNIAKEMHVGHLRSTI 152

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYK 296
           IGD+++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+
Sbjct: 153 IGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYR 212

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 356
           E+KKRFD+DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERG
Sbjct: 213 EAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIHLSERG 272

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 411
           ESFY  ++E +V  LE  GLL +DDG + ++     G+D   +P+ + KSDGGF Y T+D
Sbjct: 273 ESFYNPYLEGVVTDLEAAGLLAVDDGARCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTD 332

Query: 412 LAAIRQRI----EEEKADWIVYVTD 432
           LAAIR R     + + A  ++YVTD
Sbjct: 333 LAAIRYRFGGAPDGDGARRVIYVTD 357



 Score =  289 bits (740), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 157/325 (48%), Positives = 213/325 (65%), Gaps = 27/325 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGDFQ N A+ L K  K            + IAS +  +L  +PS + +  +  +A PG
Sbjct: 45   EFGDFQANGALPLAKPLKQA---------PRQIASAIVEQLQADPSFSALCLEPVIAGPG 95

Query: 1200 FVNVFL--SRVYA--GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+ L   R+ A   E++ D  + GV  P +     V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 96   FINLTLRPERLAAEVAERLGDPRL-GV--PAVQGSAPVVVDFSSPNIAKEMHVGHLRSTI 152

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYK 1313
            IGD+++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+
Sbjct: 153  IGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYR 212

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
            E+KKRFD+DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERG
Sbjct: 213  EAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIHLSERG 272

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 1428
            ESFY  ++E +V  LE  GLL +DDG + ++     G+D   +P+ + KSDGGF Y T+D
Sbjct: 273  ESFYNPYLEGVVTDLEAAGLLAVDDGARCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTD 332

Query: 1429 LAAIRQRI----EEEKADWIVYVTD 1449
            LAAIR R     + + A  ++YVTD
Sbjct: 333  LAAIRYRFGGAPDGDGARRVIYVTD 357


>gi|428219431|ref|YP_007103896.1| arginyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
 gi|427991213|gb|AFY71468.1| arginyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
          Length = 588

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/560 (43%), Positives = 338/560 (60%), Gaps = 42/560 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+QCN A+ L K  K K     P DIA        +E+  +  +  + +   +  PG
Sbjct: 39   RFGDYQCNAALGLAKQLKRK-----PRDIA--------TEIVAHLQIDDIGEPASIDGPG 85

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQP------PTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+NV L   Y   Q+  I     QP        L++  R++VDFSSPNIAKEMHVGHLRS
Sbjct: 86   FINVRLKTSYLETQLTTI-----QPDDRLGITKLDRPERIIVDFSSPNIAKEMHVGHLRS 140

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA--DLQAF 684
            TIIGD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L+  +PD L ++  +A  DL  F
Sbjct: 141  TIIGDCIARILEFQGHDVLRLNHVGDWGTQFGMLITYLKTAYPDALNQADVLALGDLVEF 200

Query: 685  YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 744
            YK +KK+FDED  FK+ A Q VV LQ  D + + AW+++C+ SRR+FQKIYD L++ L E
Sbjct: 201  YKAAKKKFDEDPEFKETARQAVVGLQSGDEEARLAWKLLCEQSRREFQKIYDALDIKLQE 260

Query: 745  RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDT 799
            RGESFY   +  +V  L + GL+E +DG   ++ E   +     +P+ + KS+GG+ Y T
Sbjct: 261  RGESFYNSLLPDVVQDLTQAGLVEENDGALCVFLEGFTNKAGDPLPLIVQKSNGGYNYAT 320

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLAA+R RI +++ D I+YVTD GQ  HF  + + A +AG L P   ++  V FG+VLG
Sbjct: 321  TDLAALRYRINQDQVDRIIYVTDAGQSDHFAQVFQVANRAGWL-PESVKITHVPFGLVLG 379

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            ED KK KTRSG+TVKL ELL E + R+   L    R  +       E    +    +KYA
Sbjct: 380  EDGKKLKTRSGETVKLKELLQEAIARANADL--DARDPDYDADYQKEVATTIGLDAVKYA 437

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST---P 976
            DL+ NR  +Y FS+DKML  +GNTA YLLYAY R+  I+R   I+ E    A++ T    
Sbjct: 438  DLAQNRTSNYAFSYDKMLALQGNTAPYLLYAYVRVRGISRKGDIDFEQFNHASEQTEPRS 497

Query: 977  VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE 1036
            + L    E  LAK L+++ + +  V  +L  + LC+YL+++S  F++FYD C  ++   +
Sbjct: 498  IQLTEATEINLAKHLVQLAETIEAVADELMPNRLCQYLFELSQKFNQFYDQCPVLQGSEQ 557

Query: 1037 GKIKTVHTGRLLLAEATAKV 1056
             +       RL L   TAK 
Sbjct: 558  ERF-----SRLSLCNITAKT 572



 Score =  283 bits (725), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 151/323 (46%), Positives = 208/323 (64%), Gaps = 31/323 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+QCN A+ L K  K K     P DIA        +E+  +  +  + +   +  PG
Sbjct: 39  RFGDYQCNAALGLAKQLKRK-----PRDIA--------TEIVAHLQIDDIGEPASIDGPG 85

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQP------PTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+NV L   Y   Q+  I     QP        L++  R++VDFSSPNIAKEMHVGHLRS
Sbjct: 86  FINVRLKTSYLETQLTTI-----QPDDRLGITKLDRPERIIVDFSSPNIAKEMHVGHLRS 140

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA--DLQAF 294
           TIIGD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L+  +PD L ++  +A  DL  F
Sbjct: 141 TIIGDCIARILEFQGHDVLRLNHVGDWGTQFGMLITYLKTAYPDALNQADVLALGDLVEF 200

Query: 295 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 354
           YK +KK+FDED  FK+ A Q VV LQ  D + + AW+++C+ SRR+FQKIYD L++ L E
Sbjct: 201 YKAAKKKFDEDPEFKETARQAVVGLQSGDEEARLAWKLLCEQSRREFQKIYDALDIKLQE 260

Query: 355 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDT 409
           RGESFY   +  +V  L + GL+E +DG   ++ E   +     +P+ + KS+GG+ Y T
Sbjct: 261 RGESFYNSLLPDVVQDLTQAGLVEENDGALCVFLEGFTNKAGDPLPLIVQKSNGGYNYAT 320

Query: 410 SDLAAIRQRIEEEKADWIVYVTD 432
           +DLAA+R RI +++ D I+YVTD
Sbjct: 321 TDLAALRYRINQDQVDRIIYVTD 343



 Score =  283 bits (725), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 151/323 (46%), Positives = 208/323 (64%), Gaps = 31/323 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+QCN A+ L K  K K     P DIA        +E+  +  +  + +   +  PG
Sbjct: 39   RFGDYQCNAALGLAKQLKRK-----PRDIA--------TEIVAHLQIDDIGEPASIDGPG 85

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQP------PTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+NV L   Y   Q+  I     QP        L++  R++VDFSSPNIAKEMHVGHLRS
Sbjct: 86   FINVRLKTSYLETQLTTI-----QPDDRLGITKLDRPERIIVDFSSPNIAKEMHVGHLRS 140

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA--DLQAF 1311
            TIIGD I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L+  +PD L ++  +A  DL  F
Sbjct: 141  TIIGDCIARILEFQGHDVLRLNHVGDWGTQFGMLITYLKTAYPDALNQADVLALGDLVEF 200

Query: 1312 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 1371
            YK +KK+FDED  FK+ A Q VV LQ  D + + AW+++C+ SRR+FQKIYD L++ L E
Sbjct: 201  YKAAKKKFDEDPEFKETARQAVVGLQSGDEEARLAWKLLCEQSRREFQKIYDALDIKLQE 260

Query: 1372 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDT 1426
            RGESFY   +  +V  L + GL+E +DG   ++ E   +     +P+ + KS+GG+ Y T
Sbjct: 261  RGESFYNSLLPDVVQDLTQAGLVEENDGALCVFLEGFTNKAGDPLPLIVQKSNGGYNYAT 320

Query: 1427 SDLAAIRQRIEEEKADWIVYVTD 1449
            +DLAA+R RI +++ D I+YVTD
Sbjct: 321  TDLAALRYRINQDQVDRIIYVTD 343


>gi|148240672|ref|YP_001226059.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166232850|sp|A5GP97.1|SYR_SYNPW RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|147849211|emb|CAK24762.1| Arginyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 597

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/570 (43%), Positives = 343/570 (60%), Gaps = 35/570 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGDFQ N A+AL K  K            + IA+ + ++L  +P+   +  + ++A PG
Sbjct: 45   EFGDFQANGALALAKPLKQA---------PRQIATAIVAQLQADPAFTDLCLEPQIAGPG 95

Query: 573  FVNVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            F+N+ +     A E    +    +  P + +   V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 96   FINLTVRPERLAAEVSARLGDQRLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGD 155

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESK 689
            +++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   PD L  +  +   DL AFY+E+K
Sbjct: 156  SLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDLGDLVAFYREAK 215

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 749
            KRFD+DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L ERGESF
Sbjct: 216  KRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESF 275

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  ++  L+   LL  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAA
Sbjct: 276  YNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAA 335

Query: 805  IRQRI----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            IR R     + + A  ++YVTD GQ  HF  + + A++AG + P   R++ V FG+V GE
Sbjct: 336  IRYRFGAAPDGDDARRVIYVTDAGQANHFAGVFQVAQRAGWI-PEGARLEHVPFGLVQGE 394

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKY 918
            D KK KTR+GDTV+L +LLDE + R+   L+ +    E + +E  +      V    +KY
Sbjct: 395  DGKKLKTRAGDTVRLRDLLDEAVERAETDLRSRLNEEERSESEEFIQHVAGTVGLAAVKY 454

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  +Y FSFD+ML  +GNTA YLLYA  RIA IAR  G    DL V   +  + 
Sbjct: 455  ADLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG----DLEVL--TGQLQ 508

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
                +E+AL + LL+ + V+  V  +L  + LC YL+++S  F+ FYD    ++ DAE  
Sbjct: 509  FSEPQEWALVRELLKFDAVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLKADAE-- 566

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL L   TA  +K    +L I T
Sbjct: 567  ---ALPSRLALCRLTADTLKSGLGLLGIPT 593



 Score =  279 bits (713), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/322 (45%), Positives = 205/322 (63%), Gaps = 21/322 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGDFQ N A+AL K  K            + IA+ + ++L  +P+   +  + ++A PG
Sbjct: 45  EFGDFQANGALALAKPLKQA---------PRQIATAIVAQLQADPAFTDLCLEPQIAGPG 95

Query: 183 FVNVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           F+N+ +     A E    +    +  P + +   V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 96  FINLTVRPERLAAEVSARLGDQRLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGD 155

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESK 299
           +++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   PD L  +  +   DL AFY+E+K
Sbjct: 156 SLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDLGDLVAFYREAK 215

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 359
           KRFD+DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L ERGESF
Sbjct: 216 KRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESF 275

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  ++  L+   LL  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAA
Sbjct: 276 YNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAA 335

Query: 415 IRQRI----EEEKADWIVYVTD 432
           IR R     + + A  ++YVTD
Sbjct: 336 IRYRFGAAPDGDDARRVIYVTD 357



 Score =  279 bits (713), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/322 (45%), Positives = 205/322 (63%), Gaps = 21/322 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGDFQ N A+AL K  K            + IA+ + ++L  +P+   +  + ++A PG
Sbjct: 45   EFGDFQANGALALAKPLKQA---------PRQIATAIVAQLQADPAFTDLCLEPQIAGPG 95

Query: 1200 FVNVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            F+N+ +     A E    +    +  P + +   V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 96   FINLTVRPERLAAEVSARLGDQRLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGD 155

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESK 1316
            +++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   PD L  +  +   DL AFY+E+K
Sbjct: 156  SLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDLGDLVAFYREAK 215

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 1376
            KRFD+DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL++ L ERGESF
Sbjct: 216  KRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESF 275

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  ++  L+   LL  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAA
Sbjct: 276  YNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAA 335

Query: 1432 IRQRI----EEEKADWIVYVTD 1449
            IR R     + + A  ++YVTD
Sbjct: 336  IRYRFGAAPDGDDARRVIYVTD 357


>gi|87300835|ref|ZP_01083677.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284706|gb|EAQ76658.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 610

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/556 (42%), Positives = 340/556 (61%), Gaps = 31/556 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGDFQ N A++L +  K            ++IA  +  +LA + +  ++ +  ++A PG
Sbjct: 45   EFGDFQANGALSLARRLKQA---------PRAIAGAIVEQLAVDTAFTELCEPAQIAGPG 95

Query: 573  FVNVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLR------VLVDFSSPNIAKEMHVGHLR 625
            F+N+ L  R  A E    +    +  P ++          V+VDFSSPNIAKEMHVGHLR
Sbjct: 96   FINLTLRPRQLAAELRSRLGDQRLGVPEVSGAATGAAAAPVIVDFSSPNIAKEMHVGHLR 155

Query: 626  STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQA 683
            STIIGD ++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ LT +  +   DL A
Sbjct: 156  STIIGDALARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDLGDLVA 215

Query: 684  FYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLT 743
            FY+++K RFD DE F+  + + VV LQ  DP  ++AW+++C+ SRR+FQ+IYDRL++ L+
Sbjct: 216  FYRQAKARFDADEAFQATSREEVVKLQSGDPVSRRAWQLLCEQSRREFQQIYDRLDIRLS 275

Query: 744  ERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYD 798
            ERGESFY  ++EQ+V  LE  GLL  D G + ++     G+D   +P+ + KSDGGF Y 
Sbjct: 276  ERGESFYNPYLEQVVADLEASGLLVTDAGAQCVFLEGVSGKDGQPLPLIVRKSDGGFNYA 335

Query: 799  TSDLAAIRQRI----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
            T+DLAA+R R     E + A  ++YVTD GQ  HF  + + A++AG + P   R++ V F
Sbjct: 336  TTDLAALRYRFAAPPEGDGARRLIYVTDAGQASHFAAVFQVARRAGWV-PEGGRLEHVPF 394

Query: 855  GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVA 912
            G+V G+D KK KTRSGDTV+L +LL+E + R+   L+ +    E    E  ++     V 
Sbjct: 395  GLVQGDDGKKLKTRSGDTVRLKDLLEEAVERAEADLRRRLAEEERQEEEEFITHVATTVG 454

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS NRN +Y FSFD+ML   GNTA YLLYA  RIA IAR  G+ + +   A 
Sbjct: 455  LAAVKYADLSTNRNTNYQFSFDRMLALSGNTAPYLLYALVRIAGIARKGGVGAGEGDAAG 514

Query: 973  Q-STPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI 1031
                P+     +E+ALA+ LL ++ V+  V  +L  + LC YL+++S  F+ FYD    +
Sbjct: 515  VFPDPLVFSEPQEWALARQLLALDTVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVL 574

Query: 1032 EKDAEGKIKTVHTGRL 1047
            + D   +   +   RL
Sbjct: 575  KADEPARGSRLALCRL 590



 Score =  282 bits (722), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 147/328 (44%), Positives = 210/328 (64%), Gaps = 27/328 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGDFQ N A++L +  K            ++IA  +  +LA + +  ++ +  ++A PG
Sbjct: 45  EFGDFQANGALSLARRLKQA---------PRAIAGAIVEQLAVDTAFTELCEPAQIAGPG 95

Query: 183 FVNVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLR------VLVDFSSPNIAKEMHVGHLR 235
           F+N+ L  R  A E    +    +  P ++          V+VDFSSPNIAKEMHVGHLR
Sbjct: 96  FINLTLRPRQLAAELRSRLGDQRLGVPEVSGAATGAAAAPVIVDFSSPNIAKEMHVGHLR 155

Query: 236 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQA 293
           STIIGD ++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ LT +  +   DL A
Sbjct: 156 STIIGDALARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDLGDLVA 215

Query: 294 FYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLT 353
           FY+++K RFD DE F+  + + VV LQ  DP  ++AW+++C+ SRR+FQ+IYDRL++ L+
Sbjct: 216 FYRQAKARFDADEAFQATSREEVVKLQSGDPVSRRAWQLLCEQSRREFQQIYDRLDIRLS 275

Query: 354 ERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYD 408
           ERGESFY  ++EQ+V  LE  GLL  D G + ++     G+D   +P+ + KSDGGF Y 
Sbjct: 276 ERGESFYNPYLEQVVADLEASGLLVTDAGAQCVFLEGVSGKDGQPLPLIVRKSDGGFNYA 335

Query: 409 TSDLAAIRQRI----EEEKADWIVYVTD 432
           T+DLAA+R R     E + A  ++YVTD
Sbjct: 336 TTDLAALRYRFAAPPEGDGARRLIYVTD 363



 Score =  282 bits (722), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 147/328 (44%), Positives = 210/328 (64%), Gaps = 27/328 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGDFQ N A++L +  K            ++IA  +  +LA + +  ++ +  ++A PG
Sbjct: 45   EFGDFQANGALSLARRLKQA---------PRAIAGAIVEQLAVDTAFTELCEPAQIAGPG 95

Query: 1200 FVNVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLR------VLVDFSSPNIAKEMHVGHLR 1252
            F+N+ L  R  A E    +    +  P ++          V+VDFSSPNIAKEMHVGHLR
Sbjct: 96   FINLTLRPRQLAAELRSRLGDQRLGVPEVSGAATGAAAAPVIVDFSSPNIAKEMHVGHLR 155

Query: 1253 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQA 1310
            STIIGD ++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ LT +  +   DL A
Sbjct: 156  STIIGDALARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDLGDLVA 215

Query: 1311 FYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLT 1370
            FY+++K RFD DE F+  + + VV LQ  DP  ++AW+++C+ SRR+FQ+IYDRL++ L+
Sbjct: 216  FYRQAKARFDADEAFQATSREEVVKLQSGDPVSRRAWQLLCEQSRREFQQIYDRLDIRLS 275

Query: 1371 ERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYD 1425
            ERGESFY  ++EQ+V  LE  GLL  D G + ++     G+D   +P+ + KSDGGF Y 
Sbjct: 276  ERGESFYNPYLEQVVADLEASGLLVTDAGAQCVFLEGVSGKDGQPLPLIVRKSDGGFNYA 335

Query: 1426 TSDLAAIRQRI----EEEKADWIVYVTD 1449
            T+DLAA+R R     E + A  ++YVTD
Sbjct: 336  TTDLAALRYRFAAPPEGDGARRLIYVTD 363


>gi|119511908|ref|ZP_01631006.1| arginyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463404|gb|EAW44343.1| arginyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 470

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/472 (49%), Positives = 324/472 (68%), Gaps = 17/472 (3%)

Query: 607  LVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD 666
            +VDFSSPNIAKEMHVGHLRSTI+GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++
Sbjct: 2    IVDFSSPNIAKEMHVGHLRSTILGDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLRE 61

Query: 667  KFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 724
             +P+ LT +    I DL +FY+++K+RFDEDE F++ A Q VV LQ    D   AW+++C
Sbjct: 62   VYPEALTTANALDIGDLVSFYRKAKQRFDEDEAFQETARQEVVRLQAGAEDTLHAWKLLC 121

Query: 725  DVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DR 781
            + SRR+FQ IYD L+V + ERGESFY   +  +V  L K GLL  + G ++++ E   +R
Sbjct: 122  EQSRREFQIIYDLLDVQVIERGESFYNPLLPSVVEDLAKSGLLVENQGAQVVFLEGFTNR 181

Query: 782  GSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKA 839
               PM ++  KSDGG+ Y T+DLAA+R RI++++A  I+YVTD GQ  HF    + A+KA
Sbjct: 182  EGEPMPLIVQKSDGGYNYATTDLAALRYRIQQDEAKRIIYVTDSGQSNHFAQFFQVARKA 241

Query: 840  GILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTEL 899
            G +  N   +  V FG+VLGED KKFKTRSGDTV+L +LLDE + R+   L+ + +  E 
Sbjct: 242  GWVR-NDVELVHVPFGLVLGEDGKKFKTRSGDTVRLRDLLDEAVIRARADLEARLKEEER 300

Query: 900  TPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI 957
              TE  +SE  + V    +KYADLS NR  DY+FS+DKMLD +GNTA Y+LYAY RI  I
Sbjct: 301  EETEQFISEVAEIVGISAVKYADLSQNRTSDYIFSYDKMLDLKGNTAPYMLYAYARIQGI 360

Query: 958  ARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017
            +R  GIN  +L    ++  V L+HE E ALAK LL+++ V+  V ++L  + LCEYLY++
Sbjct: 361  SRKGGINFAEL---GENVKVLLQHETELALAKYLLQLDGVISSVEQELLPNRLCEYLYEL 417

Query: 1018 STAFSEFYDNCYCIE-KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            S  F++FYD    +   +AE   + + T RL+L + TA+ ++   D+L IR 
Sbjct: 418  SKKFNQFYDRNQGVRVLEAE---EPLRTSRLVLCDLTARTLRLGLDLLGIRV 466



 Score =  246 bits (629), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 122/223 (54%), Positives = 167/223 (74%), Gaps = 7/223 (3%)

Query: 217 LVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD 276
           +VDFSSPNIAKEMHVGHLRSTI+GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++
Sbjct: 2   IVDFSSPNIAKEMHVGHLRSTILGDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLRE 61

Query: 277 KFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 334
            +P+ LT +    I DL +FY+++K+RFDEDE F++ A Q VV LQ    D   AW+++C
Sbjct: 62  VYPEALTTANALDIGDLVSFYRKAKQRFDEDEAFQETARQEVVRLQAGAEDTLHAWKLLC 121

Query: 335 DVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DR 391
           + SRR+FQ IYD L+V + ERGESFY   +  +V  L K GLL  + G ++++ E   +R
Sbjct: 122 EQSRREFQIIYDLLDVQVIERGESFYNPLLPSVVEDLAKSGLLVENQGAQVVFLEGFTNR 181

Query: 392 GSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
              PM ++  KSDGG+ Y T+DLAA+R RI++++A  I+YVTD
Sbjct: 182 EGEPMPLIVQKSDGGYNYATTDLAALRYRIQQDEAKRIIYVTD 224



 Score =  246 bits (629), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 122/223 (54%), Positives = 167/223 (74%), Gaps = 7/223 (3%)

Query: 1234 LVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD 1293
            +VDFSSPNIAKEMHVGHLRSTI+GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++
Sbjct: 2    IVDFSSPNIAKEMHVGHLRSTILGDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLRE 61

Query: 1294 KFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 1351
             +P+ LT +    I DL +FY+++K+RFDEDE F++ A Q VV LQ    D   AW+++C
Sbjct: 62   VYPEALTTANALDIGDLVSFYRKAKQRFDEDEAFQETARQEVVRLQAGAEDTLHAWKLLC 121

Query: 1352 DVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DR 1408
            + SRR+FQ IYD L+V + ERGESFY   +  +V  L K GLL  + G ++++ E   +R
Sbjct: 122  EQSRREFQIIYDLLDVQVIERGESFYNPLLPSVVEDLAKSGLLVENQGAQVVFLEGFTNR 181

Query: 1409 GSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
               PM ++  KSDGG+ Y T+DLAA+R RI++++A  I+YVTD
Sbjct: 182  EGEPMPLIVQKSDGGYNYATTDLAALRYRIQQDEAKRIIYVTD 224


>gi|237802882|ref|YP_002888076.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231274116|emb|CAX10910.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 563

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/592 (41%), Positives = 351/592 (59%), Gaps = 42/592 (7%)

Query: 480  YLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 539
            +L+ + + A+  AF EL + T  +  + +++   FG +QCNDAM L ++ +     K+P 
Sbjct: 7    FLTSLCSAAIHQAFSELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR-----KSPR 58

Query: 540  DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IVNGVQ 596
             IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + NG +
Sbjct: 59   AIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELANGFR 109

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
              +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GDWGT 
Sbjct: 110  AASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGTA 166

Query: 657  FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 716
            FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  D   
Sbjct: 167  FGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSGDAQA 223

Query: 717  KKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIM 776
               W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG K +
Sbjct: 224  LALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDGAKCV 283

Query: 777  WGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECA 836
            + E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LLE   
Sbjct: 284  FHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATC 342

Query: 837  KKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRH 896
              AG L P+K     VGFG+VL    +KFKTRSG+ +KL ELLD  + ++ + L  K   
Sbjct: 343  LAAGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESL--KAHR 399

Query: 897  TELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIAS 956
             +++  EL+     +    IKYADLS +R  DYVFSF+KML   GNTA+ LLYAY RI  
Sbjct: 400  PDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYVRIQG 459

Query: 957  IARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYD 1016
            I R  G+ S       Q  P+++    E ALA TLLR  ++L L  R+LC H L +YLY 
Sbjct: 460  IKRRMGLES-----LPQEEPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYA 514

Query: 1017 ISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            ++  F+ F+ +C+    D++ +       RL L   T + +     +L ++T
Sbjct: 515  LTNKFNAFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559



 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/358 (42%), Positives = 221/358 (61%), Gaps = 29/358 (8%)

Query: 90  YLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 149
           +L+ + + A+  AF EL + T  +  + +++   FG +QCNDAM L ++ +     K+P 
Sbjct: 7   FLTSLCSAAIHQAFSELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR-----KSPR 58

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IVNGVQ 206
            IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + NG +
Sbjct: 59  AIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELANGFR 109

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
             +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GDWGT 
Sbjct: 110 AASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGTA 166

Query: 267 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 326
           FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  D   
Sbjct: 167 FGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSGDAQA 223

Query: 327 KKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIM 386
              W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG K +
Sbjct: 224 LALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDGAKCV 283

Query: 387 WGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQA 442
           + E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD  +S H Q+L+A
Sbjct: 284 FHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEA 340



 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/346 (42%), Positives = 213/346 (61%), Gaps = 27/346 (7%)

Query: 1107 YLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 1166
            +L+ + + A+  AF EL + T  +  + +++   FG +QCNDAM L ++ +     K+P 
Sbjct: 7    FLTSLCSAAIHQAFSELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR-----KSPR 58

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IVNGVQ 1223
             IA+SI     + +   P        IE+A  GF+N   S+ +   Q++     + NG +
Sbjct: 59   AIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELANGFR 109

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
              +  K   V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GDWGT 
Sbjct: 110  AASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGTA 166

Query: 1284 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 1343
            FGMLI +LQ+   + + +   + DL A YK++  RF ED  FKKR+   VVALQ  D   
Sbjct: 167  FGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSGDAQA 223

Query: 1344 KKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIM 1403
               W+ IC VS + FQ IY  L+V L  RGESFY   + ++V  LE K L+ L DG K +
Sbjct: 224  LALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDGAKCV 283

Query: 1404 WGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            + E   SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 284  FHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328


>gi|78213959|ref|YP_382738.1| arginyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|109895048|sp|Q3AGU9.1|SYR_SYNSC RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|78198418|gb|ABB36183.1| arginyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 590

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 251/592 (42%), Positives = 352/592 (59%), Gaps = 42/592 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            +S+   L      A+Q AFPE     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LSLSQSLDAQLRAAMQRAFPEADAGLDPQLASASKQE-----FGDFQANGALPLAKPLKQ 56

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
                       + IA+ +  +L  +P+   +  + ++A PGF+N+ +       ++   +
Sbjct: 57   A---------PRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 107

Query: 592  VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             +   GV  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108  GDERLGV--PAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLN 165

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            HVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  +   V
Sbjct: 166  HVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEV 225

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   L
Sbjct: 226  VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDILLSERGESFYNPFLPAVIDGLKAAEL 285

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 817
            L  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     E + A  +
Sbjct: 286  LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPEGDGARRV 345

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            VYVTD GQ  HF  + + A++AG + P+  R++ V FG+V GED KK KTR+GDTV+L +
Sbjct: 346  VYVTDAGQANHFAGVFQVAERAGWI-PDGARLEHVPFGLVQGEDGKKLKTRAGDTVRLRD 404

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDK 935
            LLDE + R+   L+ + +  E + +E  +      V    +KYADLS NR  +Y FSFD+
Sbjct: 405  LLDEAVERAETDLRSRLKEEERSESEEFIQHVAGTVGLAAVKYADLSQNRITNYQFSFDR 464

Query: 936  MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMN 995
            ML  +GNTA YLLYA  RIA IAR  G    DL  AA +  +     +E+AL + LL+ +
Sbjct: 465  MLALQGNTAPYLLYAVVRIAGIARKGG----DL--AATNAQLQFSEPQEWALVRELLKFD 518

Query: 996  DVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRL 1047
             V+  V  +L  + LC YL+++S  F+ FYD    ++ D E     +   RL
Sbjct: 519  AVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLKADPEALASRLALCRL 570



 Score =  282 bits (722), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 160/365 (43%), Positives = 220/365 (60%), Gaps = 33/365 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           +S+   L      A+Q AFPE     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2   LSLSQSLDAQLRAAMQRAFPEADAGLDPQLASASKQE-----FGDFQANGALPLAKPLKQ 56

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
                      + IA+ +  +L  +P+   +  + ++A PGF+N+ +       ++   +
Sbjct: 57  A---------PRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 107

Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +   GV  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108 GDERLGV--PAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLN 165

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           HVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  +   V
Sbjct: 166 HVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEV 225

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   L
Sbjct: 226 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDILLSERGESFYNPFLPAVIDGLKAAEL 285

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 427
           L  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     E + A  +
Sbjct: 286 LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPEGDGARRV 345

Query: 428 VYVTD 432
           VYVTD
Sbjct: 346 VYVTD 350



 Score =  282 bits (722), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 160/365 (43%), Positives = 220/365 (60%), Gaps = 33/365 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            +S+   L      A+Q AFPE     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LSLSQSLDAQLRAAMQRAFPEADAGLDPQLASASKQE-----FGDFQANGALPLAKPLKQ 56

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
                       + IA+ +  +L  +P+   +  + ++A PGF+N+ +       ++   +
Sbjct: 57   A---------PRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 107

Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             +   GV  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108  GDERLGV--PAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLN 165

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            HVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  +   V
Sbjct: 166  HVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEV 225

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   L
Sbjct: 226  VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDILLSERGESFYNPFLPAVIDGLKAAEL 285

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 1444
            L  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     E + A  +
Sbjct: 286  LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPEGDGARRV 345

Query: 1445 VYVTD 1449
            VYVTD
Sbjct: 346  VYVTD 350


>gi|254422588|ref|ZP_05036306.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196190077|gb|EDX85041.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 585

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/568 (41%), Positives = 349/568 (61%), Gaps = 40/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q N AM+L K  +      NP    ++IA+ +T+ L     +  + +   +A PG
Sbjct: 38   KFGDYQANVAMSLAKPLR-----MNP----RAIATKITANL----DVTNICEPPSIAGPG 84

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N  L   Y  +Q+K++  +   GV  P  N   +V+VD+ SPNIAKEMHVGHLR  +I
Sbjct: 85   FINFKLKTEYLEQQLKEMHSSDRLGV--PKANPPQKVIVDYPSPNIAKEMHVGHLRPAVI 142

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPD--YLTKSPPIADLQAFYKE 687
            G+  +R+LE+LGHDV++++HVGDWGT FGMLIA+LQ+ +PD      +    +L  FY++
Sbjct: 143  GECFARVLEFLGHDVLKVSHVGDWGTPFGMLIAYLQEAYPDPQAAAAASTTGELATFYRQ 202

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT--LTER 745
            +KKRFD DE FK+ A Q VV LQ  D    +AW+ +C +S+R ++KIYD LN++  + +R
Sbjct: 203  AKKRFDTDEAFKENARQAVVKLQAGDQAVLEAWQRVCQLSKRSYRKIYDLLNISEDIIDR 262

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTS 800
            GESFY  ++  +V  L+K GLL  DDG K ++ E     D   +P+ + KS+GG+ Y T+
Sbjct: 263  GESFYNPYLADVVTDLDKAGLLVEDDGAKCVFLEGFTNKDGEPLPLIVQKSNGGYNYATT 322

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            DLAA+R RI E+K D IVY TD GQ  HF    + A++AG + P    + +  FG+V GE
Sbjct: 323  DLAALRYRITEDKVDRIVYSTDAGQANHFSQFFQVARRAGWV-PESVELSYAPFGLVQGE 381

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKY 918
            D K+ K+RSG+ V L ELLDE + R+   ++ + +  E T ++  +    + V  G +KY
Sbjct: 382  DGKRLKSRSGEVVPLQELLDEAIARTRTDVEGRLQQEERTESDDFIQNVAEKVGIGAVKY 441

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  +Y FS+D+ML  +GNTA Y++YAY R+  I+R   I+   L        V 
Sbjct: 442  ADLSQNRISNYTFSYDRMLALQGNTAPYMMYAYVRVQGISRKGEIDLSTL-----DAQVK 496

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L  E E  LAK LL++++VL  V ++L  + LC+YL+++S  F++FYD C  ++ +   +
Sbjct: 497  LTEESELTLAKHLLQLDEVLAEVEKELLPNRLCQYLFELSQKFNQFYDQCSVLQAEEPQR 556

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNI 1066
                 T RL+L + TA+ +K    +L I
Sbjct: 557  -----TSRLVLCDLTARTLKLGLSLLGI 579



 Score =  269 bits (687), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 143/322 (44%), Positives = 207/322 (64%), Gaps = 27/322 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q N AM+L K  +      NP    ++IA+ +T+ L     +  + +   +A PG
Sbjct: 38  KFGDYQANVAMSLAKPLR-----MNP----RAIATKITANL----DVTNICEPPSIAGPG 84

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N  L   Y  +Q+K++  +   GV  P  N   +V+VD+ SPNIAKEMHVGHLR  +I
Sbjct: 85  FINFKLKTEYLEQQLKEMHSSDRLGV--PKANPPQKVIVDYPSPNIAKEMHVGHLRPAVI 142

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPD--YLTKSPPIADLQAFYKE 297
           G+  +R+LE+LGHDV++++HVGDWGT FGMLIA+LQ+ +PD      +    +L  FY++
Sbjct: 143 GECFARVLEFLGHDVLKVSHVGDWGTPFGMLIAYLQEAYPDPQAAAAASTTGELATFYRQ 202

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT--LTER 355
           +KKRFD DE FK+ A Q VV LQ  D    +AW+ +C +S+R ++KIYD LN++  + +R
Sbjct: 203 AKKRFDTDEAFKENARQAVVKLQAGDQAVLEAWQRVCQLSKRSYRKIYDLLNISEDIIDR 262

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTS 410
           GESFY  ++  +V  L+K GLL  DDG K ++ E     D   +P+ + KS+GG+ Y T+
Sbjct: 263 GESFYNPYLADVVTDLDKAGLLVEDDGAKCVFLEGFTNKDGEPLPLIVQKSNGGYNYATT 322

Query: 411 DLAAIRQRIEEEKADWIVYVTD 432
           DLAA+R RI E+K D IVY TD
Sbjct: 323 DLAALRYRITEDKVDRIVYSTD 344



 Score =  269 bits (687), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 143/322 (44%), Positives = 207/322 (64%), Gaps = 27/322 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q N AM+L K  +      NP    ++IA+ +T+ L     +  + +   +A PG
Sbjct: 38   KFGDYQANVAMSLAKPLR-----MNP----RAIATKITANL----DVTNICEPPSIAGPG 84

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N  L   Y  +Q+K++  +   GV  P  N   +V+VD+ SPNIAKEMHVGHLR  +I
Sbjct: 85   FINFKLKTEYLEQQLKEMHSSDRLGV--PKANPPQKVIVDYPSPNIAKEMHVGHLRPAVI 142

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPD--YLTKSPPIADLQAFYKE 1314
            G+  +R+LE+LGHDV++++HVGDWGT FGMLIA+LQ+ +PD      +    +L  FY++
Sbjct: 143  GECFARVLEFLGHDVLKVSHVGDWGTPFGMLIAYLQEAYPDPQAAAAASTTGELATFYRQ 202

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT--LTER 1372
            +KKRFD DE FK+ A Q VV LQ  D    +AW+ +C +S+R ++KIYD LN++  + +R
Sbjct: 203  AKKRFDTDEAFKENARQAVVKLQAGDQAVLEAWQRVCQLSKRSYRKIYDLLNISEDIIDR 262

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTS 1427
            GESFY  ++  +V  L+K GLL  DDG K ++ E     D   +P+ + KS+GG+ Y T+
Sbjct: 263  GESFYNPYLADVVTDLDKAGLLVEDDGAKCVFLEGFTNKDGEPLPLIVQKSNGGYNYATT 322

Query: 1428 DLAAIRQRIEEEKADWIVYVTD 1449
            DLAA+R RI E+K D IVY TD
Sbjct: 323  DLAALRYRITEDKVDRIVYSTD 344


>gi|84996665|ref|XP_953054.1| arginyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65304050|emb|CAI76429.1| arginyl-tRNA synthetase, putative [Theileria annulata]
          Length = 632

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/602 (41%), Positives = 358/602 (59%), Gaps = 64/602 (10%)

Query: 512  HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI----ASVVTSELATNPSLAKVIDKIE 567
             KFGD+Q +DAM+L K  KD     +P ++A+ +    +S   S +  +P   K  +K  
Sbjct: 44   QKFGDYQWSDAMSLFKAAKDHLSVNSPKELAEMVKNNISSNSFSSINVSPQGNKYQNKTN 103

Query: 568  VAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-----VLVDFSSPNIAKEMHVG 622
            +   GF+   LS  +  ++I+ +   G   P+++K        V++DFSSPNIAKEMHVG
Sbjct: 104  MW-IGFMTFVLSNDWIEQEIRSLAKYG---PSVDKSTEKHGETVVIDFSSPNIAKEMHVG 159

Query: 623  HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 682
            HLRST+IGD+++R+LE+ G+ V R+NH+GDWGTQFGMLI ++ +K+PD+L   P I+DL 
Sbjct: 160  HLRSTVIGDSLARVLEFFGYKVRRINHLGDWGTQFGMLIEYMFEKYPDFLNNMPSISDLT 219

Query: 683  AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
             FYKE+K R D DE FKK++   VV LQ  D + K  W+++CD+S   F +IY RL++  
Sbjct: 220  KFYKEAKLRMDVDEEFKKKSRSRVVRLQSGDEESKLVWKVLCDISLESFNRIYKRLDINF 279

Query: 743  TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDL 802
               GESFY   + ++V  L+ +G+ +  +G  +++  D  S+P+ +VKSDGGF YD++DL
Sbjct: 280  EIFGESFYNDMIPEIVKDLQDRGIAQESEGALVIF-TDASSVPLMLVKSDGGFGYDSTDL 338

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            A IR R ++ KADWI+YVTD+GQ  HF  L + A+ AG       R+D VGFG+V  E  
Sbjct: 339  ACIRYRTQQLKADWIIYVTDIGQSEHFLKLFKSAQIAGWCE--NVRIDHVGFGMVQNEFG 396

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            +KFKTRSGDTVKL +LLDE ++RS  +L+ ++ +       L E  +A+ YG IKY DL+
Sbjct: 397  EKFKTRSGDTVKLVDLLDEAVKRSKIELEKRDPNI----PNLDEIAEALGYGSIKYFDLN 452

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR-----------TAG--------- 962
            H+   +Y FSFDKMLD RGNTAVY+ Y+Y RI  I +           T+G         
Sbjct: 453  HSVTTNYKFSFDKMLDPRGNTAVYMFYSYARICQIFKKAQSKTSSNPETSGDHAETNPNP 512

Query: 963  --------INSED-LRVAAQSTPVS--------LEHEKEFALAKTLLRMNDVLMLVTRDL 1005
                    +N ED L V  +ST V         +EH  E AL K LL+   +L  + +DL
Sbjct: 513  ENSDDNPEVNGEDNLLVNEKSTVVDDVKLSKLVIEHPTEVALGKCLLKFPSILDQIHKDL 572

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILN 1065
             ++ L +YLY++S  FS FY  C  +          +   RL+L   T  VM+ CF ++ 
Sbjct: 573  AINRLTDYLYELSVQFSSFYTKCKVVG-------DPMQESRLILCSCTKDVMRTCFQLIG 625

Query: 1066 IR 1067
            I+
Sbjct: 626  IK 627



 Score =  267 bits (683), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 209/320 (65%), Gaps = 14/320 (4%)

Query: 122 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI----ASVVTSELATNPSLAKVIDKIE 177
            KFGD+Q +DAM+L K  KD     +P ++A+ +    +S   S +  +P   K  +K  
Sbjct: 44  QKFGDYQWSDAMSLFKAAKDHLSVNSPKELAEMVKNNISSNSFSSINVSPQGNKYQNKTN 103

Query: 178 VAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-----VLVDFSSPNIAKEMHVG 232
           +   GF+   LS  +  ++I+ +   G   P+++K        V++DFSSPNIAKEMHVG
Sbjct: 104 MW-IGFMTFVLSNDWIEQEIRSLAKYG---PSVDKSTEKHGETVVIDFSSPNIAKEMHVG 159

Query: 233 HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 292
           HLRST+IGD+++R+LE+ G+ V R+NH+GDWGTQFGMLI ++ +K+PD+L   P I+DL 
Sbjct: 160 HLRSTVIGDSLARVLEFFGYKVRRINHLGDWGTQFGMLIEYMFEKYPDFLNNMPSISDLT 219

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FYKE+K R D DE FKK++   VV LQ  D + K  W+++CD+S   F +IY RL++  
Sbjct: 220 KFYKEAKLRMDVDEEFKKKSRSRVVRLQSGDEESKLVWKVLCDISLESFNRIYKRLDINF 279

Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDL 412
              GESFY   + ++V  L+ +G+ +  +G  +++  D  S+P+ +VKSDGGF YD++DL
Sbjct: 280 EIFGESFYNDMIPEIVKDLQDRGIAQESEGALVIF-TDASSVPLMLVKSDGGFGYDSTDL 338

Query: 413 AAIRQRIEEEKADWIVYVTD 432
           A IR R ++ KADWI+YVTD
Sbjct: 339 ACIRYRTQQLKADWIIYVTD 358



 Score =  267 bits (683), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 209/320 (65%), Gaps = 14/320 (4%)

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSI----ASVVTSELATNPSLAKVIDKIE 1194
             KFGD+Q +DAM+L K  KD     +P ++A+ +    +S   S +  +P   K  +K  
Sbjct: 44   QKFGDYQWSDAMSLFKAAKDHLSVNSPKELAEMVKNNISSNSFSSINVSPQGNKYQNKTN 103

Query: 1195 VAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-----VLVDFSSPNIAKEMHVG 1249
            +   GF+   LS  +  ++I+ +   G   P+++K        V++DFSSPNIAKEMHVG
Sbjct: 104  MW-IGFMTFVLSNDWIEQEIRSLAKYG---PSVDKSTEKHGETVVIDFSSPNIAKEMHVG 159

Query: 1250 HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 1309
            HLRST+IGD+++R+LE+ G+ V R+NH+GDWGTQFGMLI ++ +K+PD+L   P I+DL 
Sbjct: 160  HLRSTVIGDSLARVLEFFGYKVRRINHLGDWGTQFGMLIEYMFEKYPDFLNNMPSISDLT 219

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FYKE+K R D DE FKK++   VV LQ  D + K  W+++CD+S   F +IY RL++  
Sbjct: 220  KFYKEAKLRMDVDEEFKKKSRSRVVRLQSGDEESKLVWKVLCDISLESFNRIYKRLDINF 279

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDL 1429
               GESFY   + ++V  L+ +G+ +  +G  +++  D  S+P+ +VKSDGGF YD++DL
Sbjct: 280  EIFGESFYNDMIPEIVKDLQDRGIAQESEGALVIF-TDASSVPLMLVKSDGGFGYDSTDL 338

Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
            A IR R ++ KADWI+YVTD
Sbjct: 339  ACIRYRTQQLKADWIIYVTD 358


>gi|113955154|ref|YP_731855.1| arginyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123327552|sp|Q0I6R7.1|SYR_SYNS3 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|113882505|gb|ABI47463.1| arginyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 590

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/615 (41%), Positives = 360/615 (58%), Gaps = 51/615 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPE---LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            + +   L      A+Q AFP+   L D   + A+  E     FGDFQ N A+ L K  K 
Sbjct: 2    LRIAQALDTQLREAMQRAFPDVDALLDPQLAPANKPE-----FGDFQANGALPLAKPLKQ 56

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
                       + IA  +   L  +P+ A +  + ++A PGF+N+ +       ++   +
Sbjct: 57   A---------PRLIAGAIVEALQADPAFAALCLEPQIAGPGFINLTIRPERLAAEVSARL 107

Query: 592  VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             +   GV  P +     V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108  GDPRLGV--PEVQSDAAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLN 165

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            HVGDWGTQFGMLI HL+   P+ L ++  +   DL AFY+E+KKRFDEDE F+  + + V
Sbjct: 166  HVGDWGTQFGMLITHLKQVAPETLNRADAVDLGDLVAFYREAKKRFDEDEAFQATSREEV 225

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++  ++  L++  L
Sbjct: 226  VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKEADL 285

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 817
            L  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  +
Sbjct: 286  LVTDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFALAPDGDGARRV 345

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +YVTD GQ  HF  + + AK+A  + P   R++ V FG+V GED KK KTRSGDTV+L +
Sbjct: 346  IYVTDAGQANHFAGVFQVAKRANWI-PEHGRLEHVPFGLVQGEDGKKLKTRSGDTVRLRD 404

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTE----LSEAQQAVAYGCIKYADLSHNRNLDYVFSF 933
            LLDE + R+   L  + R  E   +E    +      V    +KYADLS NR  +Y FSF
Sbjct: 405  LLDEAVERAEADL--RRRLEEEGRSEDDQFIEHVAGTVGLAAVKYADLSQNRITNYQFSF 462

Query: 934  DKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLR 993
            D+ML  +GNTA YLLYA  RIA IAR  G    DL   A++  +     +E++L + LL+
Sbjct: 463  DRMLALQGNTAPYLLYAVVRIAGIARKGG----DLE--AEAGMLQFSEPQEWSLVRELLK 516

Query: 994  MNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEAT 1053
             + V+  V  +L  + LC YL+++S  F+ FYD    ++  AEG+       RL L   T
Sbjct: 517  FDAVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLK--AEGQ---SLPSRLALCRLT 571

Query: 1054 AKVMKKCFDILNIRT 1068
            A  +K    +L I T
Sbjct: 572  ADTLKSGLGLLGIAT 586



 Score =  282 bits (721), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 158/365 (43%), Positives = 222/365 (60%), Gaps = 33/365 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPE---LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           + +   L      A+Q AFP+   L D   + A+  E     FGDFQ N A+ L K  K 
Sbjct: 2   LRIAQALDTQLREAMQRAFPDVDALLDPQLAPANKPE-----FGDFQANGALPLAKPLKQ 56

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
                      + IA  +   L  +P+ A +  + ++A PGF+N+ +       ++   +
Sbjct: 57  A---------PRLIAGAIVEALQADPAFAALCLEPQIAGPGFINLTIRPERLAAEVSARL 107

Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +   GV  P +     V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108 GDPRLGV--PEVQSDAAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLN 165

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           HVGDWGTQFGMLI HL+   P+ L ++  +   DL AFY+E+KKRFDEDE F+  + + V
Sbjct: 166 HVGDWGTQFGMLITHLKQVAPETLNRADAVDLGDLVAFYREAKKRFDEDEAFQATSREEV 225

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++  ++  L++  L
Sbjct: 226 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKEADL 285

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 427
           L  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  +
Sbjct: 286 LVTDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFALAPDGDGARRV 345

Query: 428 VYVTD 432
           +YVTD
Sbjct: 346 IYVTD 350



 Score =  282 bits (721), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 158/365 (43%), Positives = 222/365 (60%), Gaps = 33/365 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPE---LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            + +   L      A+Q AFP+   L D   + A+  E     FGDFQ N A+ L K  K 
Sbjct: 2    LRIAQALDTQLREAMQRAFPDVDALLDPQLAPANKPE-----FGDFQANGALPLAKPLKQ 56

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
                       + IA  +   L  +P+ A +  + ++A PGF+N+ +       ++   +
Sbjct: 57   A---------PRLIAGAIVEALQADPAFAALCLEPQIAGPGFINLTIRPERLAAEVSARL 107

Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             +   GV  P +     V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108  GDPRLGV--PEVQSDAAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLN 165

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            HVGDWGTQFGMLI HL+   P+ L ++  +   DL AFY+E+KKRFDEDE F+  + + V
Sbjct: 166  HVGDWGTQFGMLITHLKQVAPETLNRADAVDLGDLVAFYREAKKRFDEDEAFQATSREEV 225

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ  DP   KAW ++CD SRR+FQKIYDRL++ L+ERGESFY  ++  ++  L++  L
Sbjct: 226  VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKEADL 285

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 1444
            L  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  +
Sbjct: 286  LVTDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFALAPDGDGARRV 345

Query: 1445 VYVTD 1449
            +YVTD
Sbjct: 346  IYVTD 350


>gi|116074027|ref|ZP_01471289.1| arginyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116069332|gb|EAU75084.1| arginyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 595

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 250/600 (41%), Positives = 346/600 (57%), Gaps = 42/600 (7%)

Query: 488  AVQVAFPELGDKTASVA---STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQS 544
            A+Q AFPE  + T               +FGDFQ N A+ L K  K            + 
Sbjct: 15   ALQRAFPEAWEATEGAGLDPQLAPASKPEFGDFQANGALPLAKPLKQA---------PRQ 65

Query: 545  IASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLN 601
            IA+ +  +L  +P+   +  + ++A PGF+N+ +       ++   + +   GV  P + 
Sbjct: 66   IATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPEQLAAEVASRLGDPRLGV--PAVE 123

Query: 602  KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 661
                V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHVGDWGTQFGMLI
Sbjct: 124  NAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLI 183

Query: 662  AHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 719
             HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  +   VV LQ  DP   KA
Sbjct: 184  THLKQVAPEALQTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEVVKLQGGDPVSLKA 243

Query: 720  WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-- 777
            W ++CD SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   LL  DDG + ++  
Sbjct: 244  WGLLCDQSRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAQCVFLE 303

Query: 778  ---GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWIVYVTDLGQGVHFR 830
               G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  +VYVTD GQ  HF 
Sbjct: 304  GVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGAKRVVYVTDAGQANHFA 363

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS-LDK 889
             + + A++AG + P  +R++ V FG+V GED KK KTR+GDTV+L +LLDE + R+  D 
Sbjct: 364  GVFQVAERAGWI-PEGSRLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVERAEADL 422

Query: 890  LKDKNRHTELTPTE-LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
                +        E +      V    +KYADLS NR  +Y FSFD+ML  +GNTA YLL
Sbjct: 423  RSRLSEEERSESKEFIGHVATTVGLAAVKYADLSQNRITNYQFSFDRMLALQGNTAPYLL 482

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YA  RIA IAR  G    DL V      +     +E+AL + LL+ + V+  V  +L  +
Sbjct: 483  YAVVRIAGIARKGG----DLEVLGAQ--LQFSEPQEWALVRELLKFDAVIAEVEEELLPN 536

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             LC YL+++S  F+ FYD    ++ D E         RL L   TA  +K    +L I T
Sbjct: 537  RLCSYLFELSQVFNRFYDQVPVLKADPE-----ALPSRLALCRLTADTLKAGLGLLGIAT 591



 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 165/415 (39%), Positives = 232/415 (55%), Gaps = 35/415 (8%)

Query: 98  AVQVAFPELGDKTASVA---STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQS 154
           A+Q AFPE  + T               +FGDFQ N A+ L K  K            + 
Sbjct: 15  ALQRAFPEAWEATEGAGLDPQLAPASKPEFGDFQANGALPLAKPLKQA---------PRQ 65

Query: 155 IASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLN 211
           IA+ +  +L  +P+   +  + ++A PGF+N+ +       ++   + +   GV  P + 
Sbjct: 66  IATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPEQLAAEVASRLGDPRLGV--PAVE 123

Query: 212 KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 271
               V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHVGDWGTQFGMLI
Sbjct: 124 NAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLI 183

Query: 272 AHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 329
            HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  +   VV LQ  DP   KA
Sbjct: 184 THLKQVAPEALQTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEVVKLQGGDPVSLKA 243

Query: 330 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-- 387
           W ++CD SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   LL  DDG + ++  
Sbjct: 244 WGLLCDQSRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAQCVFLE 303

Query: 388 ---GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWIVYVTDHRSYHQVL 440
              G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  +VYVTD    +   
Sbjct: 304 GVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGAKRVVYVTDAGQANHFA 363

Query: 441 QAIAEEEKKQGISSSSSSQ------TKGT-AKKMNVPVRDRMSVRDYLSDVFTHA 488
                 E+   I   S  +       +G   KK+     D + +RD L +    A
Sbjct: 364 GVFQVAERAGWIPEGSRLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVERA 418



 Score =  279 bits (713), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 154/352 (43%), Positives = 213/352 (60%), Gaps = 28/352 (7%)

Query: 1115 AVQVAFPELGDKTASVA---STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQS 1171
            A+Q AFPE  + T               +FGDFQ N A+ L K  K            + 
Sbjct: 15   ALQRAFPEAWEATEGAGLDPQLAPASKPEFGDFQANGALPLAKPLKQA---------PRQ 65

Query: 1172 IASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLN 1228
            IA+ +  +L  +P+   +  + ++A PGF+N+ +       ++   + +   GV  P + 
Sbjct: 66   IATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPEQLAAEVASRLGDPRLGV--PAVE 123

Query: 1229 KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 1288
                V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHVGDWGTQFGMLI
Sbjct: 124  NAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLI 183

Query: 1289 AHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 1346
             HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  +   VV LQ  DP   KA
Sbjct: 184  THLKQVAPEALQTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEVVKLQGGDPVSLKA 243

Query: 1347 WEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-- 1404
            W ++CD SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   LL  DDG + ++  
Sbjct: 244  WGLLCDQSRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAQCVFLE 303

Query: 1405 ---GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWIVYVTD 1449
               G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  +VYVTD
Sbjct: 304  GVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGAKRVVYVTD 355


>gi|219114449|ref|XP_002176395.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402641|gb|EEC42631.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 564

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/574 (40%), Positives = 346/574 (60%), Gaps = 36/574 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEK----KNPFDIAQSIASVVTSELATNPSLAKVIDKIEV 568
            K GD+QCN AM +    K         ++P D+A+++ + +     T+P    VI ++ +
Sbjct: 3    KHGDYQCNAAMPVFAALKKDSSMPDNIRSPPDVARALMAAIGD---THP----VIMELSM 55

Query: 569  AKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
              PGFV   +   +    +   +  G+ P  L  K   +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 56   NGPGFVLCRIRPSFLETHVDRFLQTGILPKPLIPKQTCVVDFSSPNIAKEMHVGHLRSTI 115

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS---------PPIA 679
            IG+ + R+LE++GHDV R+NHVGDWGTQFGMLI +L++++P+    +         P I 
Sbjct: 116  IGEAVCRILEFVGHDVHRINHVGDWGTQFGMLIQYLKEEYPEVANHNSDVDDQAALPNIT 175

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL  FYK +K RFDE   FKK +   VVALQ  DP+  + W+++CDVSR++F+K+Y RL+
Sbjct: 176  DLTQFYKSAKARFDESADFKKTSQTNVVALQSGDPECLRIWKLLCDVSRQEFEKVYQRLD 235

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 799
            VT  E GESFY   +  ++   E  G + +++G       D+  +P+ + KSDGG+ YD+
Sbjct: 236  VTTHEFGESFYNAKIPPVIAEFEAAGKISVEEGGAKCVFVDKFKVPLMLQKSDGGYGYDS 295

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +D+AA++ R++E KAD I+ +TD  QG HF+++    +  G L+ N+ +++ +GFG V G
Sbjct: 296  TDMAALKYRLQELKADRIIVITDFSQGDHFKMVYAAGRDIGWLDRNQ-QLEHIGFGTVQG 354

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVAYGCIK 917
            ED K+FKTRSGDTV+L +LLDE + R    L+++  +  + +   E+ +  +A+ YG +K
Sbjct: 355  EDGKRFKTRSGDTVRLVDLLDEAVERMEGSLRERIESDKSNIALDEVHDIAEAIGYGAVK 414

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTA----GINSEDLRVAAQ 973
            Y DL  N   +Y FS+D+MLD +G+T VYLLYA  R+ SI   A     I+ E+L     
Sbjct: 415  YYDLRRNPTTNYKFSYDQMLDTKGDTGVYLLYARVRLESIVAKAKQDYSIDVEEL--IQN 472

Query: 974  STPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK 1033
               V L H  E  L   L +  DV+     DL  +H+CEY+Y ++ A S+F  NC  +  
Sbjct: 473  GEKVRLTHPSERNLVFQLQQFPDVIEQTLEDLFPYHVCEYVYKLAVATSDFIKNCMVLGS 532

Query: 1034 DAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            D   ++KT    RLLL  AT+  M +CFD+L IR
Sbjct: 533  D---EMKT----RLLLCHATSLAMHQCFDLLGIR 559



 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 135/323 (41%), Positives = 201/323 (62%), Gaps = 20/323 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEK----KNPFDIAQSIASVVTSELATNPSLAKVIDKIEV 178
           K GD+QCN AM +    K         ++P D+A+++ + +     T+P    VI ++ +
Sbjct: 3   KHGDYQCNAAMPVFAALKKDSSMPDNIRSPPDVARALMAAIGD---THP----VIMELSM 55

Query: 179 AKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
             PGFV   +   +    +   +  G+ P  L  K   +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 56  NGPGFVLCRIRPSFLETHVDRFLQTGILPKPLIPKQTCVVDFSSPNIAKEMHVGHLRSTI 115

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS---------PPIA 289
           IG+ + R+LE++GHDV R+NHVGDWGTQFGMLI +L++++P+    +         P I 
Sbjct: 116 IGEAVCRILEFVGHDVHRINHVGDWGTQFGMLIQYLKEEYPEVANHNSDVDDQAALPNIT 175

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL  FYK +K RFDE   FKK +   VVALQ  DP+  + W+++CDVSR++F+K+Y RL+
Sbjct: 176 DLTQFYKSAKARFDESADFKKTSQTNVVALQSGDPECLRIWKLLCDVSRQEFEKVYQRLD 235

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 409
           VT  E GESFY   +  ++   E  G + +++G       D+  +P+ + KSDGG+ YD+
Sbjct: 236 VTTHEFGESFYNAKIPPVIAEFEAAGKISVEEGGAKCVFVDKFKVPLMLQKSDGGYGYDS 295

Query: 410 SDLAAIRQRIEEEKADWIVYVTD 432
           +D+AA++ R++E KAD I+ +TD
Sbjct: 296 TDMAALKYRLQELKADRIIVITD 318



 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 135/323 (41%), Positives = 201/323 (62%), Gaps = 20/323 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEK----KNPFDIAQSIASVVTSELATNPSLAKVIDKIEV 1195
            K GD+QCN AM +    K         ++P D+A+++ + +     T+P    VI ++ +
Sbjct: 3    KHGDYQCNAAMPVFAALKKDSSMPDNIRSPPDVARALMAAIGD---THP----VIMELSM 55

Query: 1196 AKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
              PGFV   +   +    +   +  G+ P  L  K   +VDFSSPNIAKEMHVGHLRSTI
Sbjct: 56   NGPGFVLCRIRPSFLETHVDRFLQTGILPKPLIPKQTCVVDFSSPNIAKEMHVGHLRSTI 115

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS---------PPIA 1306
            IG+ + R+LE++GHDV R+NHVGDWGTQFGMLI +L++++P+    +         P I 
Sbjct: 116  IGEAVCRILEFVGHDVHRINHVGDWGTQFGMLIQYLKEEYPEVANHNSDVDDQAALPNIT 175

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL  FYK +K RFDE   FKK +   VVALQ  DP+  + W+++CDVSR++F+K+Y RL+
Sbjct: 176  DLTQFYKSAKARFDESADFKKTSQTNVVALQSGDPECLRIWKLLCDVSRQEFEKVYQRLD 235

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 1426
            VT  E GESFY   +  ++   E  G + +++G       D+  +P+ + KSDGG+ YD+
Sbjct: 236  VTTHEFGESFYNAKIPPVIAEFEAAGKISVEEGGAKCVFVDKFKVPLMLQKSDGGYGYDS 295

Query: 1427 SDLAAIRQRIEEEKADWIVYVTD 1449
            +D+AA++ R++E KAD I+ +TD
Sbjct: 296  TDMAALKYRLQELKADRIIVITD 318


>gi|67587705|ref|XP_665270.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis TU502]
 gi|54655858|gb|EAL35040.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis]
          Length = 505

 Score =  428 bits (1101), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/488 (47%), Positives = 311/488 (63%), Gaps = 26/488 (5%)

Query: 602  KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 661
            K  +V+VDFSSPNIAKEMHVGHLRSTIIGDT SR+LEYLG +V+R+NHVGDWGTQFGMLI
Sbjct: 19   KTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTSRILEYLGFEVLRVNHVGDWGTQFGMLI 78

Query: 662  AHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWE 721
             +L++++P ++   P I+DLQ FYK SKKRFD D  FK R+ Q VV LQ  D D   AW+
Sbjct: 79   EYLKEEYPTFVENLPEISDLQEFYKNSKKRFDTDPQFKLRSQQNVVKLQGGDQDALIAWK 138

Query: 722  MICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDR 781
             IC+VSR +FQKIYDRL V L E GES+Y   +  +V  L++KG+L+LD+G + ++ +  
Sbjct: 139  KICEVSRVEFQKIYDRLGVRLEEFGESYYNDMIPGVVKMLDEKGILKLDNGAQCVYTK-I 197

Query: 782  GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGI 841
              IP+  VKSDGG+ YD++DLAAI  R+    ADW+VY TD+GQ  HF  L + A+  G 
Sbjct: 198  NEIPLMAVKSDGGYGYDSTDLAAIHHRLITLDADWVVYTTDMGQEEHFMKLFDVAETMGW 257

Query: 842  LNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR------ 895
             +P+ TR+ F+GFGV+ GED KKFKTRSGD VKL+EL+DEG+ R+  +L D+        
Sbjct: 258  HDPSNTRLFFIGFGVIQGEDGKKFKTRSGDVVKLTELIDEGVARAKKELVDRRNQRRSDQ 317

Query: 896  -----------HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
                       H ++  + L      + +  IKY DL  NR  +Y FSFD+MLD +GNTA
Sbjct: 318  TIKSNTDVEVDHPDIDDSNLDLMANTIGHAAIKYFDLKQNRLTNYRFSFDRMLDPKGNTA 377

Query: 945  VYLLYAYTRIASIARTAG-INSEDLRVAAQSTP---VSLEHEKEFALAKTLLRMNDVLML 1000
            VYLLYAY RI +I R    I S+D  V  Q      + + +  E  L+  LLR  +V   
Sbjct: 378  VYLLYAYARICAIFRKVEFIQSDDNMVIKQKVSNFKLKISNNVERKLSIQLLRFPEVFDG 437

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            +  D   + L +Y Y++S +F++FY  C  I  + +     +   RLLL   T +++ K 
Sbjct: 438  ILNDFFPNRLADYCYELSESFAQFYTECRIIGLEEQ----QLEQSRLLLCFLTKQILLKG 493

Query: 1061 FDILNIRT 1068
             D+L + T
Sbjct: 494  LDLLGVET 501



 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 130/221 (58%), Positives = 166/221 (75%), Gaps = 1/221 (0%)

Query: 212 KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 271
           K  +V+VDFSSPNIAKEMHVGHLRSTIIGDT SR+LEYLG +V+R+NHVGDWGTQFGMLI
Sbjct: 19  KTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTSRILEYLGFEVLRVNHVGDWGTQFGMLI 78

Query: 272 AHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWE 331
            +L++++P ++   P I+DLQ FYK SKKRFD D  FK R+ Q VV LQ  D D   AW+
Sbjct: 79  EYLKEEYPTFVENLPEISDLQEFYKNSKKRFDTDPQFKLRSQQNVVKLQGGDQDALIAWK 138

Query: 332 MICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDR 391
            IC+VSR +FQKIYDRL V L E GES+Y   +  +V  L++KG+L+LD+G + ++ +  
Sbjct: 139 KICEVSRVEFQKIYDRLGVRLEEFGESYYNDMIPGVVKMLDEKGILKLDNGAQCVYTK-I 197

Query: 392 GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             IP+  VKSDGG+ YD++DLAAI  R+    ADW+VY TD
Sbjct: 198 NEIPLMAVKSDGGYGYDSTDLAAIHHRLITLDADWVVYTTD 238



 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 130/221 (58%), Positives = 166/221 (75%), Gaps = 1/221 (0%)

Query: 1229 KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLI 1288
            K  +V+VDFSSPNIAKEMHVGHLRSTIIGDT SR+LEYLG +V+R+NHVGDWGTQFGMLI
Sbjct: 19   KTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTSRILEYLGFEVLRVNHVGDWGTQFGMLI 78

Query: 1289 AHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWE 1348
             +L++++P ++   P I+DLQ FYK SKKRFD D  FK R+ Q VV LQ  D D   AW+
Sbjct: 79   EYLKEEYPTFVENLPEISDLQEFYKNSKKRFDTDPQFKLRSQQNVVKLQGGDQDALIAWK 138

Query: 1349 MICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDR 1408
             IC+VSR +FQKIYDRL V L E GES+Y   +  +V  L++KG+L+LD+G + ++ +  
Sbjct: 139  KICEVSRVEFQKIYDRLGVRLEEFGESYYNDMIPGVVKMLDEKGILKLDNGAQCVYTK-I 197

Query: 1409 GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              IP+  VKSDGG+ YD++DLAAI  R+    ADW+VY TD
Sbjct: 198  NEIPLMAVKSDGGYGYDSTDLAAIHHRLITLDADWVVYTTD 238


>gi|29839939|ref|NP_829045.1| arginyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301690|sp|Q824H4.1|SYR_CHLCV RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|29834286|gb|AAP04923.1| arginyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 564

 Score =  428 bits (1101), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/594 (40%), Positives = 352/594 (59%), Gaps = 36/594 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++  YLS +   A   AFP++   +  +  + +++   FG +QCNDAM L +  K    
Sbjct: 3    MTLLSYLSSLCREATLSAFPQIDTFSPDITQSTKEH---FGHYQCNDAMKLARTLK---- 55

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P  IA++I + +  E+ T+         IE+A  GF+N   S+ +    +K      
Sbjct: 56   -MAPRAIAEAIVNHIPKEIFTS---------IEIAGAGFINFTFSKEFLNNSLKTFSEEL 105

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                 +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV RLNH+GDWG
Sbjct: 106  SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFAFVGNDVSRLNHIGDWG 165

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 166  TAFGMLITYLQEEPSEDIEN---LEDLTVLYKKAHARFAEDAEFKKRSQTNVVALQAGDP 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
               K W+ IC +S R FQKIY+ L++ + +RGESFY   + +++  LE K L+ + D  K
Sbjct: 223  SALKLWKQICAISERAFQKIYNILDIAIEKRGESFYNPFLPEIIQDLENKNLITISDNAK 282

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
             ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+  + AD I+ VTD+GQ +HF+LLE 
Sbjct: 283  CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVNNDGADKIIIVTDMGQSLHFQLLEA 341

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A  AG L PNK     VGFG+VL  + KKFKTRSG+ +KL ELLD  + ++   LK+  
Sbjct: 342  TALAAGYL-PNKETFSHVGFGLVLDSEGKKFKTRSGENIKLKELLDTAIDQAKATLKE-- 398

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
               E++  E+S     +    IKYADLS +R  DY+FSF+KML   GNTA++LLYAY RI
Sbjct: 399  HRPEISDEEISSRAPILGINAIKYADLSSHRVSDYIFSFEKMLRFEGNTAMFLLYAYVRI 458

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
              I R  GI + DL    ++TP +++   E ALA  LLR  + + L  +DLC H L +YL
Sbjct: 459  QGIKRRLGIETLDL----EATP-NIQEPSEEALALALLRFPEAIDLTLKDLCPHFLTDYL 513

Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            Y ++  F+ F+ +C+ IE  +  K       RL L     K +     +L ++T
Sbjct: 514  YMLTNKFNAFFRDCH-IEGSSHQK------ERLYLCALVEKTLAAGMHLLGLQT 560



 Score =  267 bits (682), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/362 (40%), Positives = 218/362 (60%), Gaps = 23/362 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++  YLS +   A   AFP++   +  +  + +++   FG +QCNDAM L +  K    
Sbjct: 3   MTLLSYLSSLCREATLSAFPQIDTFSPDITQSTKEH---FGHYQCNDAMKLARTLK---- 55

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P  IA++I + +  E+ T+         IE+A  GF+N   S+ +    +K      
Sbjct: 56  -MAPRAIAEAIVNHIPKEIFTS---------IEIAGAGFINFTFSKEFLNNSLKTFSEEL 105

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV RLNH+GDWG
Sbjct: 106 SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFAFVGNDVSRLNHIGDWG 165

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 166 TAFGMLITYLQEEPSEDIEN---LEDLTVLYKKAHARFAEDAEFKKRSQTNVVALQAGDP 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
              K W+ IC +S R FQKIY+ L++ + +RGESFY   + +++  LE K L+ + D  K
Sbjct: 223 SALKLWKQICAISERAFQKIYNILDIAIEKRGESFYNPFLPEIIQDLENKNLITISDNAK 282

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQA 442
            ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+  + AD I+ VTD  +S H Q+L+A
Sbjct: 283 CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVNNDGADKIIIVTDMGQSLHFQLLEA 341

Query: 443 IA 444
            A
Sbjct: 342 TA 343



 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/348 (40%), Positives = 209/348 (60%), Gaps = 21/348 (6%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++  YLS +   A   AFP++   +  +  + +++   FG +QCNDAM L +  K    
Sbjct: 3    MTLLSYLSSLCREATLSAFPQIDTFSPDITQSTKEH---FGHYQCNDAMKLARTLK---- 55

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P  IA++I + +  E+ T+         IE+A  GF+N   S+ +    +K      
Sbjct: 56   -MAPRAIAEAIVNHIPKEIFTS---------IEIAGAGFINFTFSKEFLNNSLKTFSEEL 105

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                 +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV RLNH+GDWG
Sbjct: 106  SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFAFVGNDVSRLNHIGDWG 165

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 166  TAFGMLITYLQEEPSEDIEN---LEDLTVLYKKAHARFAEDAEFKKRSQTNVVALQAGDP 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
               K W+ IC +S R FQKIY+ L++ + +RGESFY   + +++  LE K L+ + D  K
Sbjct: 223  SALKLWKQICAISERAFQKIYNILDIAIEKRGESFYNPFLPEIIQDLENKNLITISDNAK 282

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+  + AD I+ VTD
Sbjct: 283  CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVNNDGADKIIIVTD 329


>gi|71028762|ref|XP_764024.1| arginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350978|gb|EAN31741.1| arginyl-tRNA synthetase, putative [Theileria parva]
          Length = 629

 Score =  428 bits (1101), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/611 (39%), Positives = 355/611 (58%), Gaps = 82/611 (13%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGD+Q +DA++L K+ KD     +P ++A+ + S +TS   ++         I V+  G
Sbjct: 40   KFGDYQWSDALSLFKVAKDHLSVNSPQELAEMVKSNITSNSFSS---------INVSPQG 90

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-----VLVDFSSPNIAKEMHVGHLRST 627
            F+   LS  +  ++I+ +   G   P+++K  +     V++DFSSPNIAKEMHVGHLRST
Sbjct: 91   FMTFVLSNDWIEQEIRSLAKYG---PSVDKSTKKHGETVVIDFSSPNIAKEMHVGHLRST 147

Query: 628  IIGDT-----------------------ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL 664
            +IGD+                       ++R+LE+ G+ V R+NH+GDWGTQFGMLI ++
Sbjct: 148  VIGDSLGTLHNYLTKYLYITLLRRIYLFVARVLEFFGYKVRRINHLGDWGTQFGMLIEYM 207

Query: 665  QDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 724
             +K+PD+++  P I+D   FYKE+K R D DE FKK++   VV LQ  D + K  W+++C
Sbjct: 208  FEKYPDFVSNMPSISDFTKFYKEAKLRMDVDEEFKKKSRSRVVKLQSGDEESKLVWKVLC 267

Query: 725  DVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSI 784
            D+S   F +IY RL++     GESFY   + ++V  L+ +G+ +  +G  +++  D   +
Sbjct: 268  DISLDSFNRIYKRLDIKFEIFGESFYNDMIPEIVKDLQDRGIAQESEGALVIF-TDGSPV 326

Query: 785  PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNP 844
            P+ +VKSDGGF YD++D+A +R R  E KADWI+YVTD+GQ  HF+ L + A+ AG    
Sbjct: 327  PLMLVKSDGGFGYDSTDMACLRYRTHELKADWIIYVTDIGQSEHFQKLFKSAQLAGWC-- 384

Query: 845  NKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTEL 904
               R+D VGFG+V  E  +KFKTRSGDTVKL +LLDE +RRS  KL+ + R   +    L
Sbjct: 385  ENVRIDHVGFGMVQNELGEKFKTRSGDTVKLVDLLDEAVRRS--KLELEKRDPNI--PNL 440

Query: 905  SEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR----- 959
             E  +A+ YG +KY DL+H+   +Y FSFDKMLD RGNTAVY+ Y+Y RI  I +     
Sbjct: 441  DEVAEALGYGSVKYFDLNHSVTTNYKFSFDKMLDPRGNTAVYMFYSYARICQIFKKAESK 500

Query: 960  ------TAGINSEDLRV----------AAQSTP-------VSLEHEKEFALAKTLLRMND 996
                  T  + + D R              S P       + +EH  E ALAK LL+   
Sbjct: 501  TADGTETNNVETSDNRPVIVEDSVEVNGTSSVPNEVDLSKLVIEHPTEVALAKCLLKFPS 560

Query: 997  VLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
            +L  + +DL ++ L +YLY++S  FS FY  C  +          +   RL+L   T +V
Sbjct: 561  ILDQIHKDLAINRLTDYLYELSVQFSSFYTKCKVVG-------DPLQESRLILCSCTKEV 613

Query: 1057 MKKCFDILNIR 1067
            M+ CF ++ IR
Sbjct: 614  MRTCFQLIGIR 624



 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 135/338 (39%), Positives = 208/338 (61%), Gaps = 41/338 (12%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGD+Q +DA++L K+ KD     +P ++A+ + S +TS   ++         I V+  G
Sbjct: 40  KFGDYQWSDALSLFKVAKDHLSVNSPQELAEMVKSNITSNSFSS---------INVSPQG 90

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-----VLVDFSSPNIAKEMHVGHLRST 237
           F+   LS  +  ++I+ +   G   P+++K  +     V++DFSSPNIAKEMHVGHLRST
Sbjct: 91  FMTFVLSNDWIEQEIRSLAKYG---PSVDKSTKKHGETVVIDFSSPNIAKEMHVGHLRST 147

Query: 238 IIGDT-----------------------ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL 274
           +IGD+                       ++R+LE+ G+ V R+NH+GDWGTQFGMLI ++
Sbjct: 148 VIGDSLGTLHNYLTKYLYITLLRRIYLFVARVLEFFGYKVRRINHLGDWGTQFGMLIEYM 207

Query: 275 QDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 334
            +K+PD+++  P I+D   FYKE+K R D DE FKK++   VV LQ  D + K  W+++C
Sbjct: 208 FEKYPDFVSNMPSISDFTKFYKEAKLRMDVDEEFKKKSRSRVVKLQSGDEESKLVWKVLC 267

Query: 335 DVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSI 394
           D+S   F +IY RL++     GESFY   + ++V  L+ +G+ +  +G  +++  D   +
Sbjct: 268 DISLDSFNRIYKRLDIKFEIFGESFYNDMIPEIVKDLQDRGIAQESEGALVIF-TDGSPV 326

Query: 395 PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           P+ +VKSDGGF YD++D+A +R R  E KADWI+YVTD
Sbjct: 327 PLMLVKSDGGFGYDSTDMACLRYRTHELKADWIIYVTD 364



 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 135/338 (39%), Positives = 208/338 (61%), Gaps = 41/338 (12%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGD+Q +DA++L K+ KD     +P ++A+ + S +TS   ++         I V+  G
Sbjct: 40   KFGDYQWSDALSLFKVAKDHLSVNSPQELAEMVKSNITSNSFSS---------INVSPQG 90

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-----VLVDFSSPNIAKEMHVGHLRST 1254
            F+   LS  +  ++I+ +   G   P+++K  +     V++DFSSPNIAKEMHVGHLRST
Sbjct: 91   FMTFVLSNDWIEQEIRSLAKYG---PSVDKSTKKHGETVVIDFSSPNIAKEMHVGHLRST 147

Query: 1255 IIGDT-----------------------ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL 1291
            +IGD+                       ++R+LE+ G+ V R+NH+GDWGTQFGMLI ++
Sbjct: 148  VIGDSLGTLHNYLTKYLYITLLRRIYLFVARVLEFFGYKVRRINHLGDWGTQFGMLIEYM 207

Query: 1292 QDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMIC 1351
             +K+PD+++  P I+D   FYKE+K R D DE FKK++   VV LQ  D + K  W+++C
Sbjct: 208  FEKYPDFVSNMPSISDFTKFYKEAKLRMDVDEEFKKKSRSRVVKLQSGDEESKLVWKVLC 267

Query: 1352 DVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSI 1411
            D+S   F +IY RL++     GESFY   + ++V  L+ +G+ +  +G  +++  D   +
Sbjct: 268  DISLDSFNRIYKRLDIKFEIFGESFYNDMIPEIVKDLQDRGIAQESEGALVIF-TDGSPV 326

Query: 1412 PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            P+ +VKSDGGF YD++D+A +R R  E KADWI+YVTD
Sbjct: 327  PLMLVKSDGGFGYDSTDMACLRYRTHELKADWIIYVTD 364


>gi|329942490|ref|ZP_08291300.1| arginyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287127|ref|YP_004422028.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|384450273|ref|YP_005662873.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|384451278|ref|YP_005663876.1| arginyl-tRNA synthetase [Chlamydophila psittaci 01DC11]
 gi|384452254|ref|YP_005664851.1| arginyl-tRNA synthetase [Chlamydophila psittaci 08DC60]
 gi|384453228|ref|YP_005665824.1| arginyl-tRNA synthetase [Chlamydophila psittaci C19/98]
 gi|384454206|ref|YP_005666801.1| arginyl-tRNA synthetase [Chlamydophila psittaci 02DC15]
 gi|392376380|ref|YP_004064158.1| putative arginyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|406591992|ref|YP_006739172.1| arginyl-tRNA synthetase [Chlamydia psittaci CP3]
 gi|406593104|ref|YP_006740283.1| arginyl-tRNA synthetase [Chlamydia psittaci NJ1]
 gi|406594513|ref|YP_006741324.1| arginyl-tRNA synthetase [Chlamydia psittaci MN]
 gi|407453663|ref|YP_006732771.1| arginyl-tRNA synthetase [Chlamydia psittaci 84/55]
 gi|407454994|ref|YP_006733885.1| arginyl-tRNA synthetase [Chlamydia psittaci GR9]
 gi|407457727|ref|YP_006736032.1| arginyl-tRNA synthetase [Chlamydia psittaci WS/RT/E30]
 gi|407460344|ref|YP_006738119.1| arginyl-tRNA synthetase [Chlamydia psittaci WC]
 gi|410858157|ref|YP_006974097.1| putative arginyl-tRNA synthetase [Chlamydia psittaci 01DC12]
 gi|449070821|ref|YP_007437901.1| arginyl-tRNA synthetase [Chlamydophila psittaci Mat116]
 gi|313847723|emb|CBY16713.1| putative arginyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506631|gb|ADZ18269.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815400|gb|EGF85388.1| arginyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914367|gb|AEB55200.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|334692009|gb|AEG85228.1| arginyl-tRNA synthetase [Chlamydophila psittaci C19/98]
 gi|334692988|gb|AEG86206.1| arginyl-tRNA synthetase [Chlamydophila psittaci 01DC11]
 gi|334693963|gb|AEG87180.1| arginyl-tRNA synthetase [Chlamydophila psittaci 02DC15]
 gi|334694943|gb|AEG88159.1| arginyl-tRNA synthetase [Chlamydophila psittaci 08DC60]
 gi|405780422|gb|AFS19172.1| arginyl-tRNA synthetase [Chlamydia psittaci 84/55]
 gi|405781537|gb|AFS20286.1| arginyl-tRNA synthetase [Chlamydia psittaci GR9]
 gi|405782945|gb|AFS21693.1| arginyl-tRNA synthetase [Chlamydia psittaci MN]
 gi|405785547|gb|AFS24293.1| arginyl-tRNA synthetase [Chlamydia psittaci WS/RT/E30]
 gi|405787372|gb|AFS26116.1| arginyl-tRNA synthetase [Chlamydia psittaci WC]
 gi|405787864|gb|AFS26607.1| arginyl-tRNA synthetase [Chlamydia psittaci CP3]
 gi|405788976|gb|AFS27718.1| arginyl-tRNA synthetase [Chlamydia psittaci NJ1]
 gi|410811052|emb|CCO01695.1| putative arginyl-tRNA synthetase [Chlamydia psittaci 01DC12]
 gi|449039329|gb|AGE74753.1| arginyl-tRNA synthetase [Chlamydophila psittaci Mat116]
          Length = 562

 Score =  428 bits (1100), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/594 (40%), Positives = 355/594 (59%), Gaps = 36/594 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1    MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P  IA+SI + ++               IE+A  GF+N   S+ +    ++    + 
Sbjct: 54   -MPPRAIAESIVNHISK---------NSFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDL 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                 +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104  SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164  TAFGMLITYLQEESSEDIEN---LEDLTILYKKAHARFAEDAEFKKRSQTNVVALQSGDP 220

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
              +K WE IC++S R FQKIY+ L++++ +RGESFY   + +++  LEKK L+ + D  K
Sbjct: 221  KARKLWERICEISERAFQKIYNILDISIEKRGESFYNPFLPEIIKDLEKKNLITISDNAK 280

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
             ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E + AD I+ VTD+GQ +HF+LLE 
Sbjct: 281  CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKIIIVTDMGQSLHFQLLEA 339

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A  AG L PNK     VGFG+VL  + KKFKTRSG+ +KL ELLD  + +++  LK K+
Sbjct: 340  TALAAGYL-PNKEVFSHVGFGLVLDSEGKKFKTRSGENIKLQELLDMAIDQAVATLK-KH 397

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            R  E++  E++E    +    IKYADLS +R  DYVFSF+KML   GNTA+++LY Y RI
Sbjct: 398  R-PEMSEAEIAERAPVLGINAIKYADLSSHRVSDYVFSFEKMLRFEGNTAMFILYGYVRI 456

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
              I R  GI     +++ +ST   ++   E ALA  LLR  + + L  ++LC H L +YL
Sbjct: 457  QGIKRRLGIE----KLSLEST-ADIQEPSEEALALALLRFPEAIDLTLKELCPHFLTDYL 511

Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            Y ++  F  F+ +C+ IE     K       RL L     K +     +L ++T
Sbjct: 512  YMLTNKFHAFFRDCH-IEGSPHQK------ARLYLCALVEKTLATGMHLLGLQT 558



 Score =  272 bits (696), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 148/362 (40%), Positives = 222/362 (61%), Gaps = 23/362 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1   MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P  IA+SI + ++               IE+A  GF+N   S+ +    ++    + 
Sbjct: 54  -MPPRAIAESIVNHISK---------NSFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDL 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104 SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164 TAFGMLITYLQEESSEDIEN---LEDLTILYKKAHARFAEDAEFKKRSQTNVVALQSGDP 220

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
             +K WE IC++S R FQKIY+ L++++ +RGESFY   + +++  LEKK L+ + D  K
Sbjct: 221 KARKLWERICEISERAFQKIYNILDISIEKRGESFYNPFLPEIIKDLEKKNLITISDNAK 280

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQA 442
            ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E + AD I+ VTD  +S H Q+L+A
Sbjct: 281 CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKIIIVTDMGQSLHFQLLEA 339

Query: 443 IA 444
            A
Sbjct: 340 TA 341



 Score =  270 bits (689), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 142/348 (40%), Positives = 213/348 (61%), Gaps = 21/348 (6%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1    MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P  IA+SI + ++               IE+A  GF+N   S+ +    ++    + 
Sbjct: 54   -MPPRAIAESIVNHISK---------NSFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDL 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                 +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104  SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164  TAFGMLITYLQEESSEDIEN---LEDLTILYKKAHARFAEDAEFKKRSQTNVVALQSGDP 220

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
              +K WE IC++S R FQKIY+ L++++ +RGESFY   + +++  LEKK L+ + D  K
Sbjct: 221  KARKLWERICEISERAFQKIYNILDISIEKRGESFYNPFLPEIIKDLEKKNLITISDNAK 280

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E + AD I+ VTD
Sbjct: 281  CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKIIIVTD 327


>gi|148243340|ref|YP_001228497.1| arginyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166228634|sp|A5GW85.1|SYR_SYNR3 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|147851650|emb|CAK29144.1| Arginyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 590

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/597 (41%), Positives = 351/597 (58%), Gaps = 45/597 (7%)

Query: 488  AVQVAFPEL-GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 546
            A+Q AFPE  G+   ++   ++    +FGDFQ N A+AL K  K            + IA
Sbjct: 15   AMQQAFPEADGELNPALGPASKP---EFGDFQANGALALAKPLKQA---------PRQIA 62

Query: 547  SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN----- 601
            + +  +L  NP  + + +  ++A PGF+N+ L       +++  I +    P L      
Sbjct: 63   AAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVLAAEVRQRIGD----PRLGVAAVE 118

Query: 602  -KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 660
              +  V+VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ GH V+RLNHVGDWGTQFGML
Sbjct: 119  QAEAPVIVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGHQVLRLNHVGDWGTQFGML 178

Query: 661  IAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 718
            I HL+   P+ L  +  I   DL AFY+E+KKRFD+DE F+  + + VV LQ  D    K
Sbjct: 179  ITHLKQVAPEALNTADAIDLGDLVAFYREAKKRFDDDEAFQTTSREEVVKLQGGDATSLK 238

Query: 719  AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW- 777
            AW ++CD SRR+FQKIYDRL++ L ERGESFY   +  +V  L   GLL  D+G   ++ 
Sbjct: 239  AWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPQLAAVVDDLRSSGLLVTDEGAGCVFL 298

Query: 778  ----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE--EKADWIVYVTDLGQGVHFRL 831
                G++   +P+ + KSDGGF Y T+DLAAIR R+    + A  ++YVTD GQ  HF  
Sbjct: 299  EGVVGKEGKPLPLIVQKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTDAGQAAHFAG 358

Query: 832  LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
            + + AK+AG + P    ++ V FG+V G+D KK KTR+GDTV+L +LLDE + R+   L+
Sbjct: 359  VFQVAKRAGWV-PAAASLEHVPFGLVQGDDGKKLKTRAGDTVRLKDLLDEAVERAQADLR 417

Query: 892  DKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
             +    E   +E  + +    V    +KYADLS NR  +Y FSF++ML   GNTA YLLY
Sbjct: 418  RRLEEEERQESESFIDQVATTVGLAAVKYADLSTNRITNYQFSFERMLALTGNTAPYLLY 477

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A  RI+ IAR  G    +L        +  E  +E+AL + LL+++ V+  V  DL  + 
Sbjct: 478  AVVRISGIARKGGALDGEL-----PERLVFEEPQEWALIRQLLQLDAVISEVESDLLPNR 532

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            LC YL+++S +F+ FYD    ++ D     + + + RL L    A  +K    +L I
Sbjct: 533  LCTYLFELSQSFNRFYDQVPVLKAD-----EPMRSSRLALCRLAADTLKLGLSLLGI 584



 Score =  287 bits (734), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/351 (44%), Positives = 215/351 (61%), Gaps = 32/351 (9%)

Query: 98  AVQVAFPEL-GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 156
           A+Q AFPE  G+   ++   ++    +FGDFQ N A+AL K  K            + IA
Sbjct: 15  AMQQAFPEADGELNPALGPASKP---EFGDFQANGALALAKPLKQA---------PRQIA 62

Query: 157 SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN----- 211
           + +  +L  NP  + + +  ++A PGF+N+ L       +++  I +    P L      
Sbjct: 63  AAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVLAAEVRQRIGD----PRLGVAAVE 118

Query: 212 -KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 270
             +  V+VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ GH V+RLNHVGDWGTQFGML
Sbjct: 119 QAEAPVIVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGHQVLRLNHVGDWGTQFGML 178

Query: 271 IAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 328
           I HL+   P+ L  +  I   DL AFY+E+KKRFD+DE F+  + + VV LQ  D    K
Sbjct: 179 ITHLKQVAPEALNTADAIDLGDLVAFYREAKKRFDDDEAFQTTSREEVVKLQGGDATSLK 238

Query: 329 AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW- 387
           AW ++CD SRR+FQKIYDRL++ L ERGESFY   +  +V  L   GLL  D+G   ++ 
Sbjct: 239 AWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPQLAAVVDDLRSSGLLVTDEGAGCVFL 298

Query: 388 ----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE--EKADWIVYVTD 432
               G++   +P+ + KSDGGF Y T+DLAAIR R+    + A  ++YVTD
Sbjct: 299 EGVVGKEGKPLPLIVQKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTD 349



 Score =  287 bits (734), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/351 (44%), Positives = 215/351 (61%), Gaps = 32/351 (9%)

Query: 1115 AVQVAFPEL-GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 1173
            A+Q AFPE  G+   ++   ++    +FGDFQ N A+AL K  K            + IA
Sbjct: 15   AMQQAFPEADGELNPALGPASKP---EFGDFQANGALALAKPLKQA---------PRQIA 62

Query: 1174 SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN----- 1228
            + +  +L  NP  + + +  ++A PGF+N+ L       +++  I +    P L      
Sbjct: 63   AAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVLAAEVRQRIGD----PRLGVAAVE 118

Query: 1229 -KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 1287
              +  V+VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ GH V+RLNHVGDWGTQFGML
Sbjct: 119  QAEAPVIVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGHQVLRLNHVGDWGTQFGML 178

Query: 1288 IAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 1345
            I HL+   P+ L  +  I   DL AFY+E+KKRFD+DE F+  + + VV LQ  D    K
Sbjct: 179  ITHLKQVAPEALNTADAIDLGDLVAFYREAKKRFDDDEAFQTTSREEVVKLQGGDATSLK 238

Query: 1346 AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW- 1404
            AW ++CD SRR+FQKIYDRL++ L ERGESFY   +  +V  L   GLL  D+G   ++ 
Sbjct: 239  AWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPQLAAVVDDLRSSGLLVTDEGAGCVFL 298

Query: 1405 ----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE--EKADWIVYVTD 1449
                G++   +P+ + KSDGGF Y T+DLAAIR R+    + A  ++YVTD
Sbjct: 299  EGVVGKEGKPLPLIVQKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTD 349


>gi|15618481|ref|NP_224766.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836101|ref|NP_300625.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752468|ref|NP_444730.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241923|ref|NP_876864.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|7674357|sp|Q9Z7Y3.1|SYR_CHLPN RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|4376863|gb|AAD18710.1| Arginyl tRNA Transferase [Chlamydophila pneumoniae CWL029]
 gi|7189110|gb|AAF38053.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978941|dbj|BAA98776.1| arginyl tRNA transferase [Chlamydophila pneumoniae J138]
 gi|33236433|gb|AAP98521.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 561

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/591 (42%), Positives = 350/591 (59%), Gaps = 44/591 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            LS + + A+  AFP L D    +  + +++   FG +QCNDAM L ++ K     K P  
Sbjct: 8    LSVICSQAIAKAFPNLEDWAPEITPSTKEH---FGHYQCNDAMKLARVLK-----KAP-- 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---KDIIVNGVQP 597
              ++IA  + +EL   P        IE+A  GF+N   S V+  +Q+   KD +  G Q 
Sbjct: 58   --RAIAEAIVAELPQEP-----FSLIEIAGAGFINFTFSPVFLNQQLEHFKDALKLGFQ- 109

Query: 598  PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
              +++  ++++DFSSPNIAK+MHVGHLRSTIIGD+++R+  Y+GHDV+RLNH+GDWGT F
Sbjct: 110  --VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAF 167

Query: 658  GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            GMLI +LQ+   DY      + DL + YK++   F  DE FKKR+ Q VVALQ  DP   
Sbjct: 168  GMLITYLQENPCDY----SDLEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAI 223

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 777
              WE IC+ S + FQKIYD L++ + +RGESFY   + +++  LEKKGLL + +  K ++
Sbjct: 224  AIWEKICETSEKAFQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVF 283

Query: 778  GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAK 837
             E   SIP  + KSDGG+ Y T+DLAA+R RIEE+ AD I+ VTDLGQ +HF+LLE  A 
Sbjct: 284  HE-AFSIPFMVQKSDGGYNYATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAI 342

Query: 838  KAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT 897
             AG L P       VGFG+VL    KK KTRSG+ VKL ELLD  + ++ + L++     
Sbjct: 343  AAGYLQPGI--FSHVGFGLVLDPQGKKLKTRSGENVKLRELLDTAIEKAEEALRE--HRP 398

Query: 898  ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI 957
            ELT   + E    +    IKY+DLS +R  DYVFSF+KML   GNTA++LLYAY RI  I
Sbjct: 399  ELTDEAIQERAPVIGINAIKYSDLSSHRTSDYVFSFEKMLRFEGNTAMFLLYAYVRIQGI 458

Query: 958  ARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017
             R  GI+   L       P  ++   E  LA TLLR  + L    ++LC H L +YLY++
Sbjct: 459  KRRLGISQLSLE-----GPPEIQEPAEELLALTLLRFPEALESTIKELCPHFLTDYLYNL 513

Query: 1018 STAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +  F+ F+       +D+  +       RL L     +V+     +L ++T
Sbjct: 514  THKFNGFF-------RDSHIQDSPYAKSRLFLCALAEQVLATGMHLLGLKT 557



 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 161/359 (44%), Positives = 227/359 (63%), Gaps = 30/359 (8%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           LS + + A+  AFP L D    +  + +++   FG +QCNDAM L ++ K     K P  
Sbjct: 8   LSVICSQAIAKAFPNLEDWAPEITPSTKEH---FGHYQCNDAMKLARVLK-----KAP-- 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---KDIIVNGVQP 207
             ++IA  + +EL   P        IE+A  GF+N   S V+  +Q+   KD +  G Q 
Sbjct: 58  --RAIAEAIVAELPQEP-----FSLIEIAGAGFINFTFSPVFLNQQLEHFKDALKLGFQ- 109

Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
             +++  ++++DFSSPNIAK+MHVGHLRSTIIGD+++R+  Y+GHDV+RLNH+GDWGT F
Sbjct: 110 --VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAF 167

Query: 268 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           GMLI +LQ+   DY      + DL + YK++   F  DE FKKR+ Q VVALQ  DP   
Sbjct: 168 GMLITYLQENPCDY----SDLEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAI 223

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 387
             WE IC+ S + FQKIYD L++ + +RGESFY   + +++  LEKKGLL + +  K ++
Sbjct: 224 AIWEKICETSEKAFQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVF 283

Query: 388 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-HRSYH-QVLQAIA 444
            E   SIP  + KSDGG+ Y T+DLAA+R RIEE+ AD I+ VTD  +S H Q+L+A A
Sbjct: 284 HE-AFSIPFMVQKSDGGYNYATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATA 341



 Score =  285 bits (730), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/345 (44%), Positives = 218/345 (63%), Gaps = 28/345 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            LS + + A+  AFP L D    +  + +++   FG +QCNDAM L ++ K     K P  
Sbjct: 8    LSVICSQAIAKAFPNLEDWAPEITPSTKEH---FGHYQCNDAMKLARVLK-----KAP-- 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---KDIIVNGVQP 1224
              ++IA  + +EL   P        IE+A  GF+N   S V+  +Q+   KD +  G Q 
Sbjct: 58   --RAIAEAIVAELPQEP-----FSLIEIAGAGFINFTFSPVFLNQQLEHFKDALKLGFQ- 109

Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
              +++  ++++DFSSPNIAK+MHVGHLRSTIIGD+++R+  Y+GHDV+RLNH+GDWGT F
Sbjct: 110  --VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAF 167

Query: 1285 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            GMLI +LQ+   DY      + DL + YK++   F  DE FKKR+ Q VVALQ  DP   
Sbjct: 168  GMLITYLQENPCDY----SDLEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAI 223

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 1404
              WE IC+ S + FQKIYD L++ + +RGESFY   + +++  LEKKGLL + +  K ++
Sbjct: 224  AIWEKICETSEKAFQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVF 283

Query: 1405 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             E   SIP  + KSDGG+ Y T+DLAA+R RIEE+ AD I+ VTD
Sbjct: 284  HE-AFSIPFMVQKSDGGYNYATTDLAAMRYRIEEDHADKIIIVTD 327


>gi|424824862|ref|ZP_18249849.1| arginyl-tRNA synthetase [Chlamydophila abortus LLG]
 gi|333409961|gb|EGK68948.1| arginyl-tRNA synthetase [Chlamydophila abortus LLG]
          Length = 562

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/599 (41%), Positives = 355/599 (59%), Gaps = 46/599 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1    MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---I 591
               P  IA+SI   ++               IE+A  GF+N   S+ +    ++     +
Sbjct: 54   -MPPRAIAESIVKQISK---------NNFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDL 103

Query: 592  VNG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
             +G  VQ P      +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++GHDV+RLNH
Sbjct: 104  SSGFRVQDPK-----KVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNH 158

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            +GDWGT FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVAL
Sbjct: 159  IGDWGTAFGMLITYLQEESSEDIES---LEDLTILYKKAHARFAEDAEFKKRSQTNVVAL 215

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  DP  +K WE IC++S R FQKIY+ L++ + +RGESFY   + +++  LEKK L+ +
Sbjct: 216  QSGDPKTRKLWERICEISERAFQKIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITV 275

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
             D  K ++ E   SIP+ + K DGG+ Y T+DLAA+R R+E++ AD I+ VTD+GQ +HF
Sbjct: 276  SDEAKCVFHEG-FSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHF 334

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            +LLE  A  AG L PNK     VGFG+VL  + KKFKTRSG+ +KL ELLD  + +++  
Sbjct: 335  QLLEATALAAGYL-PNKDVFSHVGFGLVLDSEGKKFKTRSGENIKLQELLDTAIDQAVAT 393

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK K+R  E++  E++E    +    IKYADLS +R  DYVFSF+KML   GNTA+++LY
Sbjct: 394  LK-KHR-PEMSDAEITERAPVLGMNAIKYADLSSHRVSDYVFSFEKMLRFEGNTAMFILY 451

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
             Y RI  I R  GI    L  AA     +++   E ALA  LLR  + + +  ++LC H 
Sbjct: 452  GYVRIQGIKRRLGIEKLSLESAA-----NIQEPSEEALALALLRFPEAIDITLKELCPHF 506

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            L +YLY ++  F  F+ +C+ IE     K       RL L     K +     +L ++T
Sbjct: 507  LTDYLYMLTNKFHAFFRDCH-IEGSPHQK------ERLYLCALVEKTLATGMHLLGLQT 558



 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/367 (41%), Positives = 224/367 (61%), Gaps = 33/367 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1   MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---I 201
              P  IA+SI   ++               IE+A  GF+N   S+ +    ++     +
Sbjct: 54  -MPPRAIAESIVKQISK---------NNFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDL 103

Query: 202 VNG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
            +G  VQ P      +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++GHDV+RLNH
Sbjct: 104 SSGFRVQDPK-----KVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNH 158

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           +GDWGT FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVAL
Sbjct: 159 IGDWGTAFGMLITYLQEESSEDIES---LEDLTILYKKAHARFAEDAEFKKRSQTNVVAL 215

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 379
           Q  DP  +K WE IC++S R FQKIY+ L++ + +RGESFY   + +++  LEKK L+ +
Sbjct: 216 QSGDPKTRKLWERICEISERAFQKIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITV 275

Query: 380 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH- 437
            D  K ++ E   SIP+ + K DGG+ Y T+DLAA+R R+E++ AD I+ VTD  +S H 
Sbjct: 276 SDEAKCVFHEG-FSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHF 334

Query: 438 QVLQAIA 444
           Q+L+A A
Sbjct: 335 QLLEATA 341



 Score =  269 bits (687), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/353 (41%), Positives = 215/353 (60%), Gaps = 31/353 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1    MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---I 1218
               P  IA+SI   ++               IE+A  GF+N   S+ +    ++     +
Sbjct: 54   -MPPRAIAESIVKQISK---------NNFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDL 103

Query: 1219 VNG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
             +G  VQ P      +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++GHDV+RLNH
Sbjct: 104  SSGFRVQDPK-----KVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNH 158

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            +GDWGT FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVAL
Sbjct: 159  IGDWGTAFGMLITYLQEESSEDIES---LEDLTILYKKAHARFAEDAEFKKRSQTNVVAL 215

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  DP  +K WE IC++S R FQKIY+ L++ + +RGESFY   + +++  LEKK L+ +
Sbjct: 216  QSGDPKTRKLWERICEISERAFQKIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITV 275

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             D  K ++ E   SIP+ + K DGG+ Y T+DLAA+R R+E++ AD I+ VTD
Sbjct: 276  SDEAKCVFHEG-FSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVTD 327


>gi|260436601|ref|ZP_05790571.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414475|gb|EEX07771.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 590

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/592 (42%), Positives = 348/592 (58%), Gaps = 42/592 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            +S+   L      A+Q AFPE     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LSLSQSLDAQLRAAMQRAFPEADAGLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
                       + IAS +  +L  +P+   +  + ++A PGF+N+ +       ++   +
Sbjct: 57   A---------PRQIASAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 107

Query: 592  VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             +   GV  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108  GDERLGV--PAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLN 165

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            HVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  +   V
Sbjct: 166  HVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEV 225

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ  DP   KAW ++C  SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   L
Sbjct: 226  VKLQGGDPVSLKAWGLLCAQSRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKAAEL 285

Query: 767  LELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 817
            L  DDG +      M G+D   +P+ + KSDGGF Y T+DLAAIR R     E + A  +
Sbjct: 286  LVTDDGAQCVFLEGMQGKDSKPLPVIVQKSDGGFNYATTDLAAIRYRFGVAPEGDGARRV 345

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            VYVTD GQ  HF  + + A++AG + P+  R++ V FG+V GED KK KTR+GDTV+L +
Sbjct: 346  VYVTDAGQANHFAGVFQVAERAGWI-PDGARLEHVPFGLVQGEDGKKLKTRAGDTVRLRD 404

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDK 935
            LLDE + R+   L+ + +  E + +E  +      V    +KYADLS NR  +Y FSFD+
Sbjct: 405  LLDEAVERAETDLRSRLKEEERSESEEFIQHVAGTVGLAAVKYADLSQNRITNYQFSFDR 464

Query: 936  MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMN 995
            ML  +GNTA YLLYA  RIA IAR  G    DL  A  +  +     +E+AL + LL+ +
Sbjct: 465  MLALQGNTAPYLLYALVRIAGIARKGG----DL--AGTNAQLQFSEPQEWALVRELLKFD 518

Query: 996  DVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRL 1047
             V+  V  +L  + LC Y +++S  F+ FYD    ++ D E     +   RL
Sbjct: 519  AVIAEVEEELLPNRLCSYTFELSQVFNRFYDQVPVLKADPEALASRLALCRL 570



 Score =  281 bits (720), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 161/365 (44%), Positives = 218/365 (59%), Gaps = 33/365 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           +S+   L      A+Q AFPE     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2   LSLSQSLDAQLRAAMQRAFPEADAGLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
                      + IAS +  +L  +P+   +  + ++A PGF+N+ +       ++   +
Sbjct: 57  A---------PRQIASAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 107

Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +   GV  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108 GDERLGV--PAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLN 165

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           HVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  +   V
Sbjct: 166 HVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEV 225

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ  DP   KAW ++C  SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   L
Sbjct: 226 VKLQGGDPVSLKAWGLLCAQSRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKAAEL 285

Query: 377 LELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 427
           L  DDG +      M G+D   +P+ + KSDGGF Y T+DLAAIR R     E + A  +
Sbjct: 286 LVTDDGAQCVFLEGMQGKDSKPLPVIVQKSDGGFNYATTDLAAIRYRFGVAPEGDGARRV 345

Query: 428 VYVTD 432
           VYVTD
Sbjct: 346 VYVTD 350



 Score =  281 bits (720), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 161/365 (44%), Positives = 218/365 (59%), Gaps = 33/365 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            +S+   L      A+Q AFPE     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LSLSQSLDAQLRAAMQRAFPEADAGLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
                       + IAS +  +L  +P+   +  + ++A PGF+N+ +       ++   +
Sbjct: 57   A---------PRQIASAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 107

Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             +   GV  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108  GDERLGV--PAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLN 165

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            HVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+DE F+  +   V
Sbjct: 166  HVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEV 225

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ  DP   KAW ++C  SRR+FQKIYDRL++ L+ERGESFY   +  ++  L+   L
Sbjct: 226  VKLQGGDPVSLKAWGLLCAQSRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKAAEL 285

Query: 1394 LELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 1444
            L  DDG +      M G+D   +P+ + KSDGGF Y T+DLAAIR R     E + A  +
Sbjct: 286  LVTDDGAQCVFLEGMQGKDSKPLPVIVQKSDGGFNYATTDLAAIRYRFGVAPEGDGARRV 345

Query: 1445 VYVTD 1449
            VYVTD
Sbjct: 346  VYVTD 350


>gi|407458974|ref|YP_006737077.1| arginyl-tRNA synthetase [Chlamydia psittaci M56]
 gi|405786535|gb|AFS25280.1| arginyl-tRNA synthetase [Chlamydia psittaci M56]
          Length = 562

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/594 (40%), Positives = 355/594 (59%), Gaps = 36/594 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1    MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P  IA+SI + ++               IE+A  GF+N   S+ +    ++    + 
Sbjct: 54   -MPPRAIAESIVNHISK---------NSFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDL 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                 +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104  SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164  TAFGMLITYLQEESSEDIEN---LEDLTILYKKAHARFAEDAEFKKRSQTNVVALQSGDP 220

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
              +K WE IC++S R FQKIY+ L++++ +RGESFY   + +++  LEKK L+ + D  K
Sbjct: 221  KARKLWERICEISERAFQKIYNILDISIEKRGESFYNPFLPEIIKDLEKKNLITISDNAK 280

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
             ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E + AD I+ VTD+GQ +HF+LLE 
Sbjct: 281  CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKIMIVTDMGQSLHFQLLEA 339

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A  AG L PNK     VGFG+VL  + KKFKTRSG+ +KL ELLD  + +++  LK K+
Sbjct: 340  TALAAGYL-PNKEVFSHVGFGLVLDSEGKKFKTRSGENIKLQELLDMAIDQAVATLK-KH 397

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            R  E++  E++E    +    IKYADLS +R  DYVFSF+KML   GNTA+++LY Y RI
Sbjct: 398  R-PEMSEAEIAERAPVLGINAIKYADLSSHRVSDYVFSFEKMLRFEGNTAMFILYGYVRI 456

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
              I R  GI     +++ +ST   ++   E ALA  LLR  + + L  ++LC H L +YL
Sbjct: 457  QGIKRRLGIE----KLSLEST-ADIQEPSEEALALALLRFPEAIDLTLKELCPHFLTDYL 511

Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            Y ++  F  F+ +C+ IE     K       RL L     K +     +L ++T
Sbjct: 512  YMLTNKFHTFFRDCH-IEGSPHQK------ARLYLCALVEKTLATGMHLLGLQT 558



 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 148/362 (40%), Positives = 222/362 (61%), Gaps = 23/362 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1   MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P  IA+SI + ++               IE+A  GF+N   S+ +    ++    + 
Sbjct: 54  -MPPRAIAESIVNHISK---------NSFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDL 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104 SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164 TAFGMLITYLQEESSEDIEN---LEDLTILYKKAHARFAEDAEFKKRSQTNVVALQSGDP 220

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
             +K WE IC++S R FQKIY+ L++++ +RGESFY   + +++  LEKK L+ + D  K
Sbjct: 221 KARKLWERICEISERAFQKIYNILDISIEKRGESFYNPFLPEIIKDLEKKNLITISDNAK 280

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQA 442
            ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E + AD I+ VTD  +S H Q+L+A
Sbjct: 281 CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKIMIVTDMGQSLHFQLLEA 339

Query: 443 IA 444
            A
Sbjct: 340 TA 341



 Score =  269 bits (687), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/348 (40%), Positives = 213/348 (61%), Gaps = 21/348 (6%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1    MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P  IA+SI + ++               IE+A  GF+N   S+ +    ++    + 
Sbjct: 54   -MPPRAIAESIVNHISK---------NSFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDL 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                 +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104  SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164  TAFGMLITYLQEESSEDIEN---LEDLTILYKKAHARFAEDAEFKKRSQTNVVALQSGDP 220

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
              +K WE IC++S R FQKIY+ L++++ +RGESFY   + +++  LEKK L+ + D  K
Sbjct: 221  KARKLWERICEISERAFQKIYNILDISIEKRGESFYNPFLPEIIKDLEKKNLITISDNAK 280

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E + AD I+ VTD
Sbjct: 281  CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKIMIVTD 327


>gi|116072008|ref|ZP_01469276.1| arginyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065631|gb|EAU71389.1| arginyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 590

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/611 (40%), Positives = 359/611 (58%), Gaps = 43/611 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            +S+   L      A+Q AFP+     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LSLSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
                       + IA+ +  +L+ + +   +    ++A PGF+N+ +      E++   +
Sbjct: 57   P---------PRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARL 107

Query: 592  -VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
              + +  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHV
Sbjct: 108  GTDRLGVPAVDNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHV 167

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            GDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+D+ F+  +   VV 
Sbjct: 168  GDWGTQFGMLITHLKQVAPETLDTADAVDLGDLVAFYREAKKRFDDDDAFQATSRDEVVK 227

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQ  DP   KAW ++CD SRR+FQK+YDRL++ L+ERGESFY  ++  ++  L+   LL 
Sbjct: 228  LQGGDPVSLKAWGLLCDQSRREFQKLYDRLDIRLSERGESFYNPYLPAVLEGLKAVDLLV 287

Query: 769  LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVY 819
             DD  + ++     G+D   +P+ + K DGGF Y T+DLAAIR R       + A  ++Y
Sbjct: 288  TDDDAQCVFLEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRYRFASSPAGDAAQRVIY 347

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
            VTD GQ  HF  + + A++AG + P + R++ V FG+V GED KK KTR+GDTV+L +LL
Sbjct: 348  VTDAGQANHFAGVFQVAERAGWI-PAEARLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLL 406

Query: 880  DEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            DE + RS   L+ + +  E T ++  +S     V    +KYADLS NR  +Y FSFD+ML
Sbjct: 407  DEAVERSEQDLRSRLQEEERTESDAFISHVATTVGLAAVKYADLSQNRLTNYQFSFDRML 466

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
              +GNTA YLLYA  RIA IAR  G    DL V+  +  +     +E+AL + LL+ + V
Sbjct: 467  ALQGNTAPYLLYAVVRIAGIARKGG----DLGVS--NAALQFSEPQEWALVRELLKFDRV 520

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            ++ V  +L  + LC YL+++S  F+ FYD    ++ +      +    RL L   TA  +
Sbjct: 521  IVEVEDELLPNRLCSYLFELSQVFNRFYDQVPVLKAE-----PSALASRLALCRHTADTL 575

Query: 1058 KKCFDILNIRT 1068
            +    +L I T
Sbjct: 576  RCGLALLGIPT 586



 Score =  271 bits (692), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 217/363 (59%), Gaps = 29/363 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           +S+   L      A+Q AFP+     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2   LSLSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
                      + IA+ +  +L+ + +   +    ++A PGF+N+ +      E++   +
Sbjct: 57  P---------PRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARL 107

Query: 202 -VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
             + +  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHV
Sbjct: 108 GTDRLGVPAVDNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHV 167

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           GDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+D+ F+  +   VV 
Sbjct: 168 GDWGTQFGMLITHLKQVAPETLDTADAVDLGDLVAFYREAKKRFDDDDAFQATSRDEVVK 227

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ  DP   KAW ++CD SRR+FQK+YDRL++ L+ERGESFY  ++  ++  L+   LL 
Sbjct: 228 LQGGDPVSLKAWGLLCDQSRREFQKLYDRLDIRLSERGESFYNPYLPAVLEGLKAVDLLV 287

Query: 379 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVY 429
            DD  + ++     G+D   +P+ + K DGGF Y T+DLAAIR R       + A  ++Y
Sbjct: 288 TDDDAQCVFLEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRYRFASSPAGDAAQRVIY 347

Query: 430 VTD 432
           VTD
Sbjct: 348 VTD 350



 Score =  271 bits (692), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 217/363 (59%), Gaps = 29/363 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            +S+   L      A+Q AFP+     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LSLSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
                       + IA+ +  +L+ + +   +    ++A PGF+N+ +      E++   +
Sbjct: 57   P---------PRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARL 107

Query: 1219 -VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
              + +  P ++    V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHV
Sbjct: 108  GTDRLGVPAVDNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHV 167

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            GDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+D+ F+  +   VV 
Sbjct: 168  GDWGTQFGMLITHLKQVAPETLDTADAVDLGDLVAFYREAKKRFDDDDAFQATSRDEVVK 227

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQ  DP   KAW ++CD SRR+FQK+YDRL++ L+ERGESFY  ++  ++  L+   LL 
Sbjct: 228  LQGGDPVSLKAWGLLCDQSRREFQKLYDRLDIRLSERGESFYNPYLPAVLEGLKAVDLLV 287

Query: 1396 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVY 1446
             DD  + ++     G+D   +P+ + K DGGF Y T+DLAAIR R       + A  ++Y
Sbjct: 288  TDDDAQCVFLEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRYRFASSPAGDAAQRVIY 347

Query: 1447 VTD 1449
            VTD
Sbjct: 348  VTD 350


>gi|62184813|ref|YP_219598.1| arginyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81313008|sp|Q5L6U4.1|SYR_CHLAB RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|62147880|emb|CAH63627.1| putative arginyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 562

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/599 (41%), Positives = 355/599 (59%), Gaps = 46/599 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1    MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---I 591
               P  IA+SI   ++               IE+A  GF+N   S+ +    ++     +
Sbjct: 54   -MPPRAIAESIVKQISK---------NNFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDL 103

Query: 592  VNG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
             +G  VQ P      +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++GHDV+RLNH
Sbjct: 104  SSGFRVQDPK-----KVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNH 158

Query: 650  VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            +GDWGT FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVAL
Sbjct: 159  IGDWGTAFGMLITYLQEESSEDIES---LEDLTILYKKAHVRFAEDAEFKKRSQTNVVAL 215

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
            Q  DP  +K WE IC++S R FQKIY+ L++ + +RGESFY   + +++  LEKK L+ +
Sbjct: 216  QSGDPKARKLWERICEISERAFQKIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITV 275

Query: 770  DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
             D  K ++ E   SIP+ + K DGG+ Y T+DLAA+R R+E++ AD I+ VTD+GQ +HF
Sbjct: 276  SDEAKCVFHEG-FSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHF 334

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            +LLE  A  AG L PNK     VGFG+VL  + KKFKTRSG+ +KL ELLD  + +++  
Sbjct: 335  QLLEATALAAGYL-PNKDVFSHVGFGLVLDSEGKKFKTRSGENIKLQELLDTAIDQAVAT 393

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            LK K+R  E++  E++E    +    IKYADLS +R  DYVFSF+KML   GNTA+++LY
Sbjct: 394  LK-KHR-PEMSDAEITERAPVLGMNAIKYADLSSHRVSDYVFSFEKMLRFEGNTAMFILY 451

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
             Y RI  I R  GI    L  AA     +++   E ALA  LLR  + + +  ++LC H 
Sbjct: 452  GYVRIQGIKRRLGIEKLSLESAA-----NIQEPSEEALALALLRFPEAIDITLKELCPHF 506

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            L +YLY ++  F  F+ +C+ IE     K       RL L     K +     +L ++T
Sbjct: 507  LTDYLYMLTNKFHAFFRDCH-IEGSPHQK------ERLYLCALVEKTLATGMHLLGLQT 558



 Score =  271 bits (692), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 152/367 (41%), Positives = 224/367 (61%), Gaps = 33/367 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1   MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---I 201
              P  IA+SI   ++               IE+A  GF+N   S+ +    ++     +
Sbjct: 54  -MPPRAIAESIVKQISK---------NNFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDL 103

Query: 202 VNG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
            +G  VQ P      +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++GHDV+RLNH
Sbjct: 104 SSGFRVQDPK-----KVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNH 158

Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           +GDWGT FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVAL
Sbjct: 159 IGDWGTAFGMLITYLQEESSEDIES---LEDLTILYKKAHVRFAEDAEFKKRSQTNVVAL 215

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 379
           Q  DP  +K WE IC++S R FQKIY+ L++ + +RGESFY   + +++  LEKK L+ +
Sbjct: 216 QSGDPKARKLWERICEISERAFQKIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITV 275

Query: 380 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH- 437
            D  K ++ E   SIP+ + K DGG+ Y T+DLAA+R R+E++ AD I+ VTD  +S H 
Sbjct: 276 SDEAKCVFHEG-FSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHF 334

Query: 438 QVLQAIA 444
           Q+L+A A
Sbjct: 335 QLLEATA 341



 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/353 (41%), Positives = 215/353 (60%), Gaps = 31/353 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1    MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---I 1218
               P  IA+SI   ++               IE+A  GF+N   S+ +    ++     +
Sbjct: 54   -MPPRAIAESIVKQISK---------NNFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDL 103

Query: 1219 VNG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
             +G  VQ P      +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++GHDV+RLNH
Sbjct: 104  SSGFRVQDPK-----KVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNH 158

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            +GDWGT FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVAL
Sbjct: 159  IGDWGTAFGMLITYLQEESSEDIES---LEDLTILYKKAHVRFAEDAEFKKRSQTNVVAL 215

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
            Q  DP  +K WE IC++S R FQKIY+ L++ + +RGESFY   + +++  LEKK L+ +
Sbjct: 216  QSGDPKARKLWERICEISERAFQKIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITV 275

Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             D  K ++ E   SIP+ + K DGG+ Y T+DLAA+R R+E++ AD I+ VTD
Sbjct: 276  SDEAKCVFHEG-FSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVTD 327


>gi|302757685|ref|XP_002962266.1| hypothetical protein SELMODRAFT_76727 [Selaginella moellendorffii]
 gi|300170925|gb|EFJ37526.1| hypothetical protein SELMODRAFT_76727 [Selaginella moellendorffii]
          Length = 578

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/595 (40%), Positives = 349/595 (58%), Gaps = 32/595 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD-KGE 534
            SVR  +S +F  A +    E       V + N     KFGD+Q N+AM +    K  +  
Sbjct: 6    SVRSEISQIFQAAFRSTVGEWVSVEPIVTACNNP---KFGDYQINNAMGIWSRIKGMQST 62

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP  IAQ +          N     + +K  VA  G++NV LS  +  E++  ++  G
Sbjct: 63   YGNPVSIAQDVLR--------NIPRTSLFEKTSVAGAGYINVTLSARFIAERLTTVLHQG 114

Query: 595  VQP--PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            V    P L  K   LVDFSSPNIAKE+HVGHLRST+IGD+++R+LE+    V+R NHVGD
Sbjct: 115  VDALAPELPVK-HALVDFSSPNIAKELHVGHLRSTVIGDSVARMLEFCNVSVMRRNHVGD 173

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGTQFGML+ H+ +   +       I DLQ  Y E+ +RF  DE FK +A Q VV LQR 
Sbjct: 174  WGTQFGMLLEHIFETGAEV----EGIGDLQKMYVEASERFKSDEQFKAKAQQGVVKLQRS 229

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            + +Y   W+ +CDVSRR +++ Y RLNV+L E+GESFY  ++   +  LE+KGLL+  DG
Sbjct: 230  EAEYHAKWKSLCDVSRRAYERTYGRLNVSLEEKGESFYHPYIPYAIKALEEKGLLQESDG 289

Query: 773  RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             ++++ E    IP+ + K+DG  TY T+DLAA+  R+  EKA+WI+YVTD+GQ  HF + 
Sbjct: 290  ARVIFLEGY-DIPLIVTKTDGAITYATTDLAALWYRVHVEKAEWIIYVTDVGQKQHFDMF 348

Query: 833  EECAKKAGILNPNK-TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
             + AK AG L  +   +   +GFG+VLGED K+ + R G  V L+ LLD+   RS  +L 
Sbjct: 349  FQAAKLAGWLPEHGFPKAQHIGFGMVLGEDGKRIRGRKGG-VLLANLLDDAKSRSHKELI 407

Query: 892  DKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
            ++ R  E +  +L  A +A+ YG +KYADL +NR  +Y F FD+MLD +GNTAVYL YAY
Sbjct: 408  ERGRKGEWSGQDLEAAAEALGYGAVKYADLKNNRETNYRFDFDQMLDIKGNTAVYLFYAY 467

Query: 952  TRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
             R+ SI R +G + ++++   Q   + +EH  E +L   L++  + +      L    LC
Sbjct: 468  ARVCSIIRKSGRSIDEIK---QICELVVEHPHERSLGLHLIQFTETVEDSISRLLPSTLC 524

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +YLY +S  F++FY +C        G ++     RLLL EA   +MK+  ++L +
Sbjct: 525  DYLYTLSELFTQFYTSC-----KVNGSLQ--EASRLLLCEAARLIMKQGLELLGL 572



 Score =  274 bits (701), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/350 (42%), Positives = 209/350 (59%), Gaps = 20/350 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD-KGE 144
           SVR  +S +F  A +    E       V + N     KFGD+Q N+AM +    K  +  
Sbjct: 6   SVRSEISQIFQAAFRSTVGEWVSVEPIVTACNNP---KFGDYQINNAMGIWSRIKGMQST 62

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP  IAQ +          N     + +K  VA  G++NV LS  +  E++  ++  G
Sbjct: 63  YGNPVSIAQDVLR--------NIPRTSLFEKTSVAGAGYINVTLSARFIAERLTTVLHQG 114

Query: 205 VQP--PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           V    P L  K   LVDFSSPNIAKE+HVGHLRST+IGD+++R+LE+    V+R NHVGD
Sbjct: 115 VDALAPELPVK-HALVDFSSPNIAKELHVGHLRSTVIGDSVARMLEFCNVSVMRRNHVGD 173

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGTQFGML+ H+ +   +       I DLQ  Y E+ +RF  DE FK +A Q VV LQR 
Sbjct: 174 WGTQFGMLLEHIFETGAEV----EGIGDLQKMYVEASERFKSDEQFKAKAQQGVVKLQRS 229

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           + +Y   W+ +CDVSRR +++ Y RLNV+L E+GESFY  ++   +  LE+KGLL+  DG
Sbjct: 230 EAEYHAKWKSLCDVSRRAYERTYGRLNVSLEEKGESFYHPYIPYAIKALEEKGLLQESDG 289

Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            ++++ E    IP+ + K+DG  TY T+DLAA+  R+  EKA+WI+YVTD
Sbjct: 290 ARVIFLEGY-DIPLIVTKTDGAITYATTDLAALWYRVHVEKAEWIIYVTD 338



 Score =  274 bits (701), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/350 (42%), Positives = 209/350 (59%), Gaps = 20/350 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD-KGE 1161
            SVR  +S +F  A +    E       V + N     KFGD+Q N+AM +    K  +  
Sbjct: 6    SVRSEISQIFQAAFRSTVGEWVSVEPIVTACNNP---KFGDYQINNAMGIWSRIKGMQST 62

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP  IAQ +          N     + +K  VA  G++NV LS  +  E++  ++  G
Sbjct: 63   YGNPVSIAQDVLR--------NIPRTSLFEKTSVAGAGYINVTLSARFIAERLTTVLHQG 114

Query: 1222 VQP--PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            V    P L  K   LVDFSSPNIAKE+HVGHLRST+IGD+++R+LE+    V+R NHVGD
Sbjct: 115  VDALAPELPVK-HALVDFSSPNIAKELHVGHLRSTVIGDSVARMLEFCNVSVMRRNHVGD 173

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGTQFGML+ H+ +   +       I DLQ  Y E+ +RF  DE FK +A Q VV LQR 
Sbjct: 174  WGTQFGMLLEHIFETGAEV----EGIGDLQKMYVEASERFKSDEQFKAKAQQGVVKLQRS 229

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            + +Y   W+ +CDVSRR +++ Y RLNV+L E+GESFY  ++   +  LE+KGLL+  DG
Sbjct: 230  EAEYHAKWKSLCDVSRRAYERTYGRLNVSLEEKGESFYHPYIPYAIKALEEKGLLQESDG 289

Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++++ E    IP+ + K+DG  TY T+DLAA+  R+  EKA+WI+YVTD
Sbjct: 290  ARVIFLEGY-DIPLIVTKTDGAITYATTDLAALWYRVHVEKAEWIIYVTD 338


>gi|403336906|gb|EJY67655.1| Arginyl-tRNA synthetase [Oxytricha trifallax]
          Length = 645

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 255/659 (38%), Positives = 354/659 (53%), Gaps = 84/659 (12%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            +S+  +L  +   A  +A P L +K       N+ +     D+ C   + +  + K  G 
Sbjct: 2    LSLPKHLGGIIGKAALMALPGLNEKIQVTPERNKDW-----DYTCPSGIKIYNMNKKTG- 55

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG---------FVNVFLSRVYAGE 585
                F   Q +A+ +   L    S    I+K+E+ + G         F+N+ L   +   
Sbjct: 56   -SFGFPTCQELANAIVQNLDHENS---AIEKVELKQAGAGPADKAGFFLNISLKNEFIEN 111

Query: 586  QIKDIIVNGVQPPTLN------KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 639
            +I  I+ +  Q    N      KK RV+VDFSSPNIAK MHVGHLRSTI GD+I R+LE+
Sbjct: 112  EIMKIL-HTEQLSVQNDEEEEAKKQRVVVDFSSPNIAKNMHVGHLRSTIQGDSICRVLEF 170

Query: 640  LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFK 699
            LG+DV+R NH+GDWGTQFGMLI  L DKFP+   +   + DLQ FY+ +KKRFDE+  FK
Sbjct: 171  LGYDVLRTNHLGDWGTQFGMLITELNDKFPNMQAEGIDMGDLQTFYQNAKKRFDEEPEFK 230

Query: 700  KRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVP 759
            K +   VV LQ  D D  KAW+ +C+VSR++FQKIY+RL++ + ERGESFY   ++ LV 
Sbjct: 231  KTSQLNVVKLQSGDEDCVKAWQYLCEVSRKEFQKIYERLDIRIEERGESFYNPLLKPLVE 290

Query: 760  YLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
             +E++G ++ D G K ++   +  IP+ + KSDGGF YDT+DLAA+R RI E+ ADWI+Y
Sbjct: 291  EMEERGFIKEDKGAKCIF-IPKQKIPLMLQKSDGGFNYDTTDLAALRFRINEQGADWIIY 349

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF-------------- 865
            +TD GQ +HF+L+ E  K  GI +P KTR+D +GFG+VL E    +              
Sbjct: 350  ITDCGQELHFKLVFEGGKIVGIYDPTKTRIDHMGFGLVLQESTYDYEEEKKEGQEETKEI 409

Query: 866  -------------------------KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELT 900
                                     KTR G + KL  LLDE   R+L   K++N   +L 
Sbjct: 410  KKEQIKEEKKEETKAAPKKKKVEKIKTREGKSTKLEALLDEAKNRALQIFKNRNEEHQLE 469

Query: 901  PTE-----------LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
              E           L +  + +    IKY DL  NR  +YVFSFDKMLD RGNT VYL Y
Sbjct: 470  GAEAVHKVQVEDSDLEKTAEILGISSIKYYDLKQNRIQNYVFSFDKMLDPRGNTGVYLQY 529

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
             Y R+ SI R      + +    Q+    +  + E  LA TLLR+ + + L   DL L+ 
Sbjct: 530  MYVRVLSIMRKGNYTPDKIHELMQNDKFVITSKSERELALTLLRLPEQIDLALTDLQLNR 589

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            L E LY+ +    EFY     I    E         R+LL EAT KVM + F +L ++T
Sbjct: 590  LTELLYETAVKIGEFYQQNKVIGSQEE-------KSRILLLEATRKVMLQIFGLLGMKT 641



 Score =  284 bits (726), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 155/363 (42%), Positives = 220/363 (60%), Gaps = 27/363 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           +S+  +L  +   A  +A P L +K       N+ +     D+ C   + +  + K  G 
Sbjct: 2   LSLPKHLGGIIGKAALMALPGLNEKIQVTPERNKDW-----DYTCPSGIKIYNMNKKTG- 55

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG---------FVNVFLSRVYAGE 195
               F   Q +A+ +   L    S    I+K+E+ + G         F+N+ L   +   
Sbjct: 56  -SFGFPTCQELANAIVQNLDHENS---AIEKVELKQAGAGPADKAGFFLNISLKNEFIEN 111

Query: 196 QIKDIIVNGVQPPTLN------KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 249
           +I  I+ +  Q    N      KK RV+VDFSSPNIAK MHVGHLRSTI GD+I R+LE+
Sbjct: 112 EIMKIL-HTEQLSVQNDEEEEAKKQRVVVDFSSPNIAKNMHVGHLRSTIQGDSICRVLEF 170

Query: 250 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFK 309
           LG+DV+R NH+GDWGTQFGMLI  L DKFP+   +   + DLQ FY+ +KKRFDE+  FK
Sbjct: 171 LGYDVLRTNHLGDWGTQFGMLITELNDKFPNMQAEGIDMGDLQTFYQNAKKRFDEEPEFK 230

Query: 310 KRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVP 369
           K +   VV LQ  D D  KAW+ +C+VSR++FQKIY+RL++ + ERGESFY   ++ LV 
Sbjct: 231 KTSQLNVVKLQSGDEDCVKAWQYLCEVSRKEFQKIYERLDIRIEERGESFYNPLLKPLVE 290

Query: 370 YLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 429
            +E++G ++ D G K ++   +  IP+ + KSDGGF YDT+DLAA+R RI E+ ADWI+Y
Sbjct: 291 EMEERGFIKEDKGAKCIF-IPKQKIPLMLQKSDGGFNYDTTDLAALRFRINEQGADWIIY 349

Query: 430 VTD 432
           +TD
Sbjct: 350 ITD 352



 Score =  284 bits (726), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 155/363 (42%), Positives = 220/363 (60%), Gaps = 27/363 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            +S+  +L  +   A  +A P L +K       N+ +     D+ C   + +  + K  G 
Sbjct: 2    LSLPKHLGGIIGKAALMALPGLNEKIQVTPERNKDW-----DYTCPSGIKIYNMNKKTG- 55

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG---------FVNVFLSRVYAGE 1212
                F   Q +A+ +   L    S    I+K+E+ + G         F+N+ L   +   
Sbjct: 56   -SFGFPTCQELANAIVQNLDHENS---AIEKVELKQAGAGPADKAGFFLNISLKNEFIEN 111

Query: 1213 QIKDIIVNGVQPPTLN------KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 1266
            +I  I+ +  Q    N      KK RV+VDFSSPNIAK MHVGHLRSTI GD+I R+LE+
Sbjct: 112  EIMKIL-HTEQLSVQNDEEEEAKKQRVVVDFSSPNIAKNMHVGHLRSTIQGDSICRVLEF 170

Query: 1267 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFK 1326
            LG+DV+R NH+GDWGTQFGMLI  L DKFP+   +   + DLQ FY+ +KKRFDE+  FK
Sbjct: 171  LGYDVLRTNHLGDWGTQFGMLITELNDKFPNMQAEGIDMGDLQTFYQNAKKRFDEEPEFK 230

Query: 1327 KRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVP 1386
            K +   VV LQ  D D  KAW+ +C+VSR++FQKIY+RL++ + ERGESFY   ++ LV 
Sbjct: 231  KTSQLNVVKLQSGDEDCVKAWQYLCEVSRKEFQKIYERLDIRIEERGESFYNPLLKPLVE 290

Query: 1387 YLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 1446
             +E++G ++ D G K ++   +  IP+ + KSDGGF YDT+DLAA+R RI E+ ADWI+Y
Sbjct: 291  EMEERGFIKEDKGAKCIF-IPKQKIPLMLQKSDGGFNYDTTDLAALRFRINEQGADWIIY 349

Query: 1447 VTD 1449
            +TD
Sbjct: 350  ITD 352


>gi|224008801|ref|XP_002293359.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970759|gb|EED89095.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 553

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/545 (42%), Positives = 336/545 (61%), Gaps = 29/545 (5%)

Query: 537  NPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-- 594
            +P D+A++I   V S+   NP L +    + V  PGF+   + R Y    +  II NG  
Sbjct: 19   SPQDVAKAIIDAVPSD---NPVLCE----MNVNGPGFIMSRIKREYLERGVNHIIKNGAP 71

Query: 595  VQPPTLNKK------LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             +P +  +         V+VDFSSPNIAKEMHVGHLRSTIIG+++ R+L Y+GHDV R+N
Sbjct: 72   TKPKSAGRNDASGGGGVVVVDFSSPNIAKEMHVGHLRSTIIGESVCRILSYVGHDVKRIN 131

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLI +L++++PD+    P I DL  FYK +K RFDE   FKK +   VV 
Sbjct: 132  HVGDWGTQFGMLIQYLKEEYPDFHGDIPNITDLTEFYKNAKMRFDESPEFKKISQLNVVK 191

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQ  D + +K W+++CDVSR++F+K+YDRL++T+ E GESFY   +  ++   + +GL+ 
Sbjct: 192  LQAGDEECRKIWQVLCDVSRKEFEKVYDRLDITVEECGESFYNDKIAPVIEEFDSRGLVS 251

Query: 769  LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            +++G        +  +P+ + KSDGG+ YD++D+AAI+ R+++ KA  IVY+TD  QG H
Sbjct: 252  VEEGGAKCVFVPKYKVPLMLQKSDGGYGYDSTDMAAIKYRLDQMKASQIVYITDFTQGDH 311

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            F+++   AKK G ++ +  R+D +GFG V GED K+FKTRSGDTV+L +LLDE + R   
Sbjct: 312  FQMVFAAAKKIGWVSEDSHRLDHIGFGTVQGEDGKRFKTRSGDTVRLVDLLDEAVSRMET 371

Query: 889  KLKDK--NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
             LK++  +    +   E+     A+ YG +KY DL  N   +Y+FS+D+MLD +GNTA+Y
Sbjct: 372  SLKERATDGKAAVDDAEIHATASAMGYGAVKYFDLRRNPTSNYIFSYDRMLDTKGNTAIY 431

Query: 947  LLYAYTRIASIARTA----GINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            LLYA+ R+ SI        G++ ++L + A    + L H+ E  L   L    D +    
Sbjct: 432  LLYAHARLESIISKGKAEFGVDVDEL-IKAGKAKIILAHKSERNLGLHLEFFADAVEETL 490

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
             DL  +H+C+++Y +S A SEF   C  +              RLLL  ATA  M++CFD
Sbjct: 491  NDLFPYHICDFVYALSNAASEFVTQCKVLGSPE-------MESRLLLCRATAISMRQCFD 543

Query: 1063 ILNIR 1067
            +L IR
Sbjct: 544  LLGIR 548



 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 132/294 (44%), Positives = 194/294 (65%), Gaps = 15/294 (5%)

Query: 147 NPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-- 204
           +P D+A++I   V S+   NP L +    + V  PGF+   + R Y    +  II NG  
Sbjct: 19  SPQDVAKAIIDAVPSD---NPVLCE----MNVNGPGFIMSRIKREYLERGVNHIIKNGAP 71

Query: 205 VQPPTLNKK------LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +P +  +         V+VDFSSPNIAKEMHVGHLRSTIIG+++ R+L Y+GHDV R+N
Sbjct: 72  TKPKSAGRNDASGGGGVVVVDFSSPNIAKEMHVGHLRSTIIGESVCRILSYVGHDVKRIN 131

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLI +L++++PD+    P I DL  FYK +K RFDE   FKK +   VV 
Sbjct: 132 HVGDWGTQFGMLIQYLKEEYPDFHGDIPNITDLTEFYKNAKMRFDESPEFKKISQLNVVK 191

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ  D + +K W+++CDVSR++F+K+YDRL++T+ E GESFY   +  ++   + +GL+ 
Sbjct: 192 LQAGDEECRKIWQVLCDVSRKEFEKVYDRLDITVEECGESFYNDKIAPVIEEFDSRGLVS 251

Query: 379 LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +++G        +  +P+ + KSDGG+ YD++D+AAI+ R+++ KA  IVY+TD
Sbjct: 252 VEEGGAKCVFVPKYKVPLMLQKSDGGYGYDSTDMAAIKYRLDQMKASQIVYITD 305



 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 132/294 (44%), Positives = 194/294 (65%), Gaps = 15/294 (5%)

Query: 1164 NPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-- 1221
            +P D+A++I   V S+   NP L +    + V  PGF+   + R Y    +  II NG  
Sbjct: 19   SPQDVAKAIIDAVPSD---NPVLCE----MNVNGPGFIMSRIKREYLERGVNHIIKNGAP 71

Query: 1222 VQPPTLNKK------LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             +P +  +         V+VDFSSPNIAKEMHVGHLRSTIIG+++ R+L Y+GHDV R+N
Sbjct: 72   TKPKSAGRNDASGGGGVVVVDFSSPNIAKEMHVGHLRSTIIGESVCRILSYVGHDVKRIN 131

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLI +L++++PD+    P I DL  FYK +K RFDE   FKK +   VV 
Sbjct: 132  HVGDWGTQFGMLIQYLKEEYPDFHGDIPNITDLTEFYKNAKMRFDESPEFKKISQLNVVK 191

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQ  D + +K W+++CDVSR++F+K+YDRL++T+ E GESFY   +  ++   + +GL+ 
Sbjct: 192  LQAGDEECRKIWQVLCDVSRKEFEKVYDRLDITVEECGESFYNDKIAPVIEEFDSRGLVS 251

Query: 1396 LDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +++G        +  +P+ + KSDGG+ YD++D+AAI+ R+++ KA  IVY+TD
Sbjct: 252  VEEGGAKCVFVPKYKVPLMLQKSDGGYGYDSTDMAAIKYRLDQMKASQIVYITD 305


>gi|157412544|ref|YP_001483410.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157387119|gb|ABV49824.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 604

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/581 (42%), Positives = 353/581 (60%), Gaps = 47/581 (8%)

Query: 512  HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
             +FGD+QCN  ++L KI+K     KNP DI+    ++    L  N S++K+   +E+A P
Sbjct: 43   EEFGDYQCNVCLSLSKIYK-----KNPRDISNDFINL----LNKNKSISKLCKSLEIAGP 93

Query: 572  GFVNVFLSRVYAGEQIK-DIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 624
            GF+N+ L       +IK +I  N    P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDAVLINEIKANIQCNRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 625  RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 682
            RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 683  AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
             FYKESKKRFD +  F+KR+ + VV LQ  D    KAW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKESKKRFDNESEFQKRSREEVVKLQSGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 743  TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 797
             ERGESFY   ++ L+  L  K +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274  EERGESFYNPFLKSLIDDLNLKKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 798  DTSDLAAIRQRIEE----EKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
             T+DLAAIR R  +    + A  I+YVTD GQ  HF  + + AKKA  + P   ++D V 
Sbjct: 334  ATTDLAAIRYRFNQPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWI-PENRQVDHVP 392

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQ 909
            FG+V G D KK KTR G+T++L +LL+E +RR+    L +LKD++R+   T   ++   +
Sbjct: 393  FGLVQGIDGKKLKTREGETIRLKDLLNEAVRRAKEDLLKRLKDEDRYE--TEEFIANTSR 450

Query: 910  AVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGI--NSED 967
             +  G +KYADLS NR  +Y FSFDKML   GNTA YLLY   RI  I R      +S+D
Sbjct: 451  IIGLGAVKYADLSQNRITNYQFSFDKMLSLNGNTAPYLLYTLVRILGIKRKNDFVYDSKD 510

Query: 968  LRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDN 1027
            L+       ++ EH+ E+ L + LL+ ++V++ + +DL  + LC YL+++   F+ FYD 
Sbjct: 511  LQY------INYEHKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYDQ 564

Query: 1028 CYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               ++++     K +   RL L + TAK +K   ++L I T
Sbjct: 565  VPILKEE-----KYIKISRLNLCDLTAKTLKLSLELLGIET 600



 Score =  275 bits (702), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/330 (46%), Positives = 207/330 (62%), Gaps = 27/330 (8%)

Query: 122 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
            +FGD+QCN  ++L KI+K     KNP DI+    ++    L  N S++K+   +E+A P
Sbjct: 43  EEFGDYQCNVCLSLSKIYK-----KNPRDISNDFINL----LNKNKSISKLCKSLEIAGP 93

Query: 182 GFVNVFLSRVYAGEQIK-DIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 234
           GF+N+ L       +IK +I  N    P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94  GFINIKLKDAVLINEIKANIQCNRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 235 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 292
           RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154 RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FYKESKKRFD +  F+KR+ + VV LQ  D    KAW+++CD SR++F +IY  L + +
Sbjct: 214 EFYKESKKRFDNESEFQKRSREEVVKLQSGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 407
            ERGESFY   ++ L+  L  K +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274 EERGESFYNPFLKSLIDDLNLKKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 408 DTSDLAAIRQRIEE----EKADWIVYVTDH 433
            T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334 ATTDLAAIRYRFNQPPNGDDASRIIYVTDH 363



 Score =  275 bits (702), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/330 (46%), Positives = 207/330 (62%), Gaps = 27/330 (8%)

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             +FGD+QCN  ++L KI+K     KNP DI+    ++    L  N S++K+   +E+A P
Sbjct: 43   EEFGDYQCNVCLSLSKIYK-----KNPRDISNDFINL----LNKNKSISKLCKSLEIAGP 93

Query: 1199 GFVNVFLSRVYAGEQIK-DIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 1251
            GF+N+ L       +IK +I  N    P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDAVLINEIKANIQCNRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 1252 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 1309
            RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FYKESKKRFD +  F+KR+ + VV LQ  D    KAW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKESKKRFDNESEFQKRSREEVVKLQSGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 1424
             ERGESFY   ++ L+  L  K +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274  EERGESFYNPFLKSLIDDLNLKKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 1425 DTSDLAAIRQRIEE----EKADWIVYVTDH 1450
             T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334  ATTDLAAIRYRFNQPPNGDDASRIIYVTDH 363


>gi|15835354|ref|NP_297113.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285526|ref|ZP_06194920.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289537|ref|ZP_06195839.1| arginyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336923|ref|ZP_07225125.1| arginyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878798|sp|Q9PJT8.1|SYR_CHLMU RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|7190768|gb|AAF39548.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 563

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/593 (40%), Positives = 349/593 (58%), Gaps = 36/593 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            ++  +L+ + + A++ AFPEL + T  +  + +++   FG +QCNDAM L +  +     
Sbjct: 3    TLLSFLTSLCSSAIRQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARALR----- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
            K+P  IA+ I + +          A     IE+A  GF+N   S+ +   Q++       
Sbjct: 55   KSPRAIAEEIVAHIP---------ATPFSSIEIAGAGFINFTFSKEFLANQLQIFSQELA 105

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            +   ++   +V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GDWGT
Sbjct: 106  KGFPVSSPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGT 165

Query: 656  QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
             FGMLI +LQ+      T    + +L   YK++  RF ED  FKKR+   VVALQ  DP 
Sbjct: 166  AFGMLITYLQETAQ---TDIHQLENLTELYKKAHVRFAEDPEFKKRSQYNVVALQSGDPQ 222

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
                W+ IC VS + FQKIY  L+V L  RGESFY   +  +V  LE K L+ L DG K 
Sbjct: 223  ALALWKQICAVSEKSFQKIYSILDVELHTRGESFYNPFLADVVSDLESKNLVTLSDGAKC 282

Query: 776  MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
            ++ E+  SIP+ I KSDGG+ Y T+D+AA+R RI+++ AD I+ VTD GQ +HF+LLE  
Sbjct: 283  VFHEEF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDHADRILIVTDSGQSLHFQLLEAT 341

Query: 836  AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
               AG L P+K     VGFG+VL    +KFKTRSG+ +KL ELLD  + ++ + L++   
Sbjct: 342  CLAAGYL-PHKGIFSHVGFGLVLDTQGRKFKTRSGENIKLQELLDTAIEKAKESLREHR- 399

Query: 896  HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIA 955
              E++  EL+     +    IKYADLS +R  DYVFSF+KML   GNTA+ LLYAY RI 
Sbjct: 400  -PEISEEELAYQGPILGINAIKYADLSAHRINDYVFSFEKMLRFEGNTAMSLLYAYVRIQ 458

Query: 956  SIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLY 1015
             I R   +++       Q  P+S+    E  LA TLLR  +VL L  R+LC H L +YLY
Sbjct: 459  GIKRRMKLDT-----LPQKGPLSIHEPAEETLALTLLRFPEVLDLTLRELCPHFLTDYLY 513

Query: 1016 DISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             ++  F+ F+ +C+    D + +       RL L   T K ++    +L ++T
Sbjct: 514  VLTNKFNAFFRDCHIEGSDYQQE-------RLYLCGLTEKTLETGMHLLGLKT 559



 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/359 (42%), Positives = 219/359 (61%), Gaps = 23/359 (6%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           ++  +L+ + + A++ AFPEL + T  +  + +++   FG +QCNDAM L +  +     
Sbjct: 3   TLLSFLTSLCSSAIRQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARALR----- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
           K+P  IA+ I + +          A     IE+A  GF+N   S+ +   Q++       
Sbjct: 55  KSPRAIAEEIVAHIP---------ATPFSSIEIAGAGFINFTFSKEFLANQLQIFSQELA 105

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
           +   ++   +V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GDWGT
Sbjct: 106 KGFPVSSPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGT 165

Query: 266 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 325
            FGMLI +LQ+      T    + +L   YK++  RF ED  FKKR+   VVALQ  DP 
Sbjct: 166 AFGMLITYLQETAQ---TDIHQLENLTELYKKAHVRFAEDPEFKKRSQYNVVALQSGDPQ 222

Query: 326 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
               W+ IC VS + FQKIY  L+V L  RGESFY   +  +V  LE K L+ L DG K 
Sbjct: 223 ALALWKQICAVSEKSFQKIYSILDVELHTRGESFYNPFLADVVSDLESKNLVTLSDGAKC 282

Query: 386 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQA 442
           ++ E+  SIP+ I KSDGG+ Y T+D+AA+R RI+++ AD I+ VTD  +S H Q+L+A
Sbjct: 283 VFHEEF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDHADRILIVTDSGQSLHFQLLEA 340



 Score =  270 bits (691), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 146/347 (42%), Positives = 211/347 (60%), Gaps = 21/347 (6%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            ++  +L+ + + A++ AFPEL + T  +  + +++   FG +QCNDAM L +  +     
Sbjct: 3    TLLSFLTSLCSSAIRQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARALR----- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
            K+P  IA+ I + +          A     IE+A  GF+N   S+ +   Q++       
Sbjct: 55   KSPRAIAEEIVAHIP---------ATPFSSIEIAGAGFINFTFSKEFLANQLQIFSQELA 105

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            +   ++   +V++DFSSPNIAK+MHVGHLRSTIIGD ++R   ++GHDV+RLNH+GDWGT
Sbjct: 106  KGFPVSSPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGT 165

Query: 1283 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
             FGMLI +LQ+      T    + +L   YK++  RF ED  FKKR+   VVALQ  DP 
Sbjct: 166  AFGMLITYLQETAQ---TDIHQLENLTELYKKAHVRFAEDPEFKKRSQYNVVALQSGDPQ 222

Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
                W+ IC VS + FQKIY  L+V L  RGESFY   +  +V  LE K L+ L DG K 
Sbjct: 223  ALALWKQICAVSEKSFQKIYSILDVELHTRGESFYNPFLADVVSDLESKNLVTLSDGAKC 282

Query: 1403 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++ E+  SIP+ I KSDGG+ Y T+D+AA+R RI+++ AD I+ VTD
Sbjct: 283  VFHEEF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDHADRILIVTD 328


>gi|33866849|ref|NP_898408.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|39932064|sp|Q7U3V8.1|SYR_SYNPX RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|33639450|emb|CAE08834.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 597

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/592 (41%), Positives = 351/592 (59%), Gaps = 42/592 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFP---ELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            +S+ + L      A+Q AFP    + D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 9    LSLSNTLDAQLRAAMQRAFPVADAVLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 63

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
                       + IA+ +  +L  +     +  + ++A PGF+N+ +       ++   +
Sbjct: 64   A---------PRQIATAIVEQLQADSGFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 114

Query: 592  VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             +   GV  P + +   V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 115  GDERLGV--PAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHTVLRLN 172

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            HVGDWGTQFGMLI HL+   PD L  +  +   DL AFY+E+KKRFD+DE F+  + + V
Sbjct: 173  HVGDWGTQFGMLITHLKQVAPDALETADAVDLGDLVAFYREAKKRFDDDEAFQSTSREEV 232

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
            V LQ  DP   KAW ++CD SRR+FQKIYDRL++ L ERGESFY   +  ++  L+   L
Sbjct: 233  VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPFLPAVIDGLKAAEL 292

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 817
            L  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  +
Sbjct: 293  LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGARRV 352

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            VYVTD GQ  HF  + + A++AG + P+  R++ V FG+V GED KK KTR+GDTV+L +
Sbjct: 353  VYVTDAGQANHFAGVFQVAERAGWI-PDGARLEHVPFGLVQGEDGKKLKTRAGDTVRLRD 411

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDK 935
            LLDE + R+   L+ + +  E + +E  +      V    +KYADLS NR  +Y FSFD+
Sbjct: 412  LLDEAVERAETDLRSRLKEEERSESEEFIQNVAGTVGLAAVKYADLSQNRITNYQFSFDR 471

Query: 936  MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMN 995
            ML  +GNTA YLLYA  RIA IAR  G    DL V+  +  +     +E+AL + LL+ +
Sbjct: 472  MLALQGNTAPYLLYAVVRIAGIARKGG----DLEVS--TGQLQFSEPQEWALVRELLKFD 525

Query: 996  DVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRL 1047
             V+  V  +L  + LC YL+++S  F+ FYD    ++ D E     +   RL
Sbjct: 526  SVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLKADPEALASRLALCRL 577



 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 158/365 (43%), Positives = 219/365 (60%), Gaps = 33/365 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFP---ELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           +S+ + L      A+Q AFP    + D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 9   LSLSNTLDAQLRAAMQRAFPVADAVLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 63

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
                      + IA+ +  +L  +     +  + ++A PGF+N+ +       ++   +
Sbjct: 64  A---------PRQIATAIVEQLQADSGFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 114

Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +   GV  P + +   V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 115 GDERLGV--PAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHTVLRLN 172

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           HVGDWGTQFGMLI HL+   PD L  +  +   DL AFY+E+KKRFD+DE F+  + + V
Sbjct: 173 HVGDWGTQFGMLITHLKQVAPDALETADAVDLGDLVAFYREAKKRFDDDEAFQSTSREEV 232

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
           V LQ  DP   KAW ++CD SRR+FQKIYDRL++ L ERGESFY   +  ++  L+   L
Sbjct: 233 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPFLPAVIDGLKAAEL 292

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 427
           L  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  +
Sbjct: 293 LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGARRV 352

Query: 428 VYVTD 432
           VYVTD
Sbjct: 353 VYVTD 357



 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 158/365 (43%), Positives = 219/365 (60%), Gaps = 33/365 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFP---ELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            +S+ + L      A+Q AFP    + D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 9    LSLSNTLDAQLRAAMQRAFPVADAVLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 63

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
                       + IA+ +  +L  +     +  + ++A PGF+N+ +       ++   +
Sbjct: 64   A---------PRQIATAIVEQLQADSGFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 114

Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             +   GV  P + +   V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 115  GDERLGV--PAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHTVLRLN 172

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            HVGDWGTQFGMLI HL+   PD L  +  +   DL AFY+E+KKRFD+DE F+  + + V
Sbjct: 173  HVGDWGTQFGMLITHLKQVAPDALETADAVDLGDLVAFYREAKKRFDDDEAFQSTSREEV 232

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
            V LQ  DP   KAW ++CD SRR+FQKIYDRL++ L ERGESFY   +  ++  L+   L
Sbjct: 233  VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPFLPAVIDGLKAAEL 292

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 1444
            L  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAAIR R     + + A  +
Sbjct: 293  LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGARRV 352

Query: 1445 VYVTD 1449
            VYVTD
Sbjct: 353  VYVTD 357


>gi|303274520|ref|XP_003056579.1| arginyl-tRNA synthetase [Micromonas pusilla CCMP1545]
 gi|226462663|gb|EEH59955.1| arginyl-tRNA synthetase [Micromonas pusilla CCMP1545]
          Length = 654

 Score =  425 bits (1092), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 253/608 (41%), Positives = 364/608 (59%), Gaps = 46/608 (7%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+R  +  +F+ A  V FP        +A  + +     GD+QCN AM +    KD+G+ 
Sbjct: 70   SLRSTMKLMFSQAGNVVFPGESSLDFEIAECSNR---ALGDYQCNSAMKIFAELKDRGDT 126

Query: 536  --KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII-- 591
              KNP  +A++I   +       P+     +K+ VA PGF+N+  SR +  ++   +   
Sbjct: 127  RFKNPRSLAEAIIQAI-------PAENSFFEKLAVAGPGFINITFSREFLAQEALRVFHC 179

Query: 592  -VNGVQPPTLN-KKL---RVLVDFSSPNIAKEM---HVGHLRSTIIGDTISRLLEYLGHD 643
              +G    T   +KL   R +VD+SSPNIAKEM   HVGHLRSTIIG+TI R LE++G +
Sbjct: 180  SADGTFETTRKFRKLTAKRAVVDYSSPNIAKEMQEMHVGHLRSTIIGETICRALEFVGVE 239

Query: 644  VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKR 701
            V+RLNHVGDWGTQFGML+AHL+D     +++S    + +LQ  YK+SK RFD DE FKKR
Sbjct: 240  VIRLNHVGDWGTQFGMLLAHLED-----ISESSDFEVKNLQELYKQSKIRFDSDEDFKKR 294

Query: 702  AYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYL 761
            A   VV LQ  D   K+ W  IC+VSR+DF++IY  L+V + ERGES+Y   +  ++  L
Sbjct: 295  ARAAVVHLQAGDKHLKEKWTDICEVSRQDFEEIYRLLDVHILERGESYYNYLIPDVLSEL 354

Query: 762  EKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
             +K +    DG   ++ +   S P+   KS+G F Y ++DLAA+ QRI +  ADWI+YVT
Sbjct: 355  IEKEIAVQSDGALCIFADGSDS-PLICRKSNGSFNYASTDLAALWQRISDLCADWIIYVT 413

Query: 822  DLGQGVHFRLLEECAKKAGIL---NPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSEL 878
            D+GQ  HF  + + A +AG L   N N + +D VGFG+V+G D K+F+TRSGDTV L  L
Sbjct: 414  DVGQKKHFDAIFDAASRAGWLKRENGNVS-LDHVGFGLVMGVDGKRFRTRSGDTVPLKSL 472

Query: 879  LDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            L E   R LD L  + R + L+  EL +A + +    +KYADL +NR  +Y FS+++MLD
Sbjct: 473  LREAQSRCLDSL--RGRESTLSDDELEDASRIMGVAAVKYADLHNNRLTNYTFSYERMLD 530

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
             +GNTAVYLLY + RI+S+   A  +++DL   + +  V L+ E E  LA T+++  DV+
Sbjct: 531  LKGNTAVYLLYTHARISSLLERA--HTQDLEPLSINDLV-LKDEFERVLALTIMKFPDVV 587

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
              V +DL    LC+Y Y +   F+EFY +C  +  + E         R  L +ATA  ++
Sbjct: 588  ESVVQDLLPSRLCDYTYSLCVTFNEFYGSCKVLGGEQE-------RSRTFLCQATAISLR 640

Query: 1059 KCFDILNI 1066
            +CF IL I
Sbjct: 641  QCFHILGI 648



 Score =  263 bits (673), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 153/361 (42%), Positives = 217/361 (60%), Gaps = 30/361 (8%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           S+R  +  +F+ A  V FP        +A  + +     GD+QCN AM +    KD+G+ 
Sbjct: 70  SLRSTMKLMFSQAGNVVFPGESSLDFEIAECSNR---ALGDYQCNSAMKIFAELKDRGDT 126

Query: 146 --KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII-- 201
             KNP  +A++I   +       P+     +K+ VA PGF+N+  SR +  ++   +   
Sbjct: 127 RFKNPRSLAEAIIQAI-------PAENSFFEKLAVAGPGFINITFSREFLAQEALRVFHC 179

Query: 202 -VNGVQPPTLN-KKL---RVLVDFSSPNIAKEM---HVGHLRSTIIGDTISRLLEYLGHD 253
             +G    T   +KL   R +VD+SSPNIAKEM   HVGHLRSTIIG+TI R LE++G +
Sbjct: 180 SADGTFETTRKFRKLTAKRAVVDYSSPNIAKEMQEMHVGHLRSTIIGETICRALEFVGVE 239

Query: 254 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKR 311
           V+RLNHVGDWGTQFGML+AHL+D     +++S    + +LQ  YK+SK RFD DE FKKR
Sbjct: 240 VIRLNHVGDWGTQFGMLLAHLED-----ISESSDFEVKNLQELYKQSKIRFDSDEDFKKR 294

Query: 312 AYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYL 371
           A   VV LQ  D   K+ W  IC+VSR+DF++IY  L+V + ERGES+Y   +  ++  L
Sbjct: 295 ARAAVVHLQAGDKHLKEKWTDICEVSRQDFEEIYRLLDVHILERGESYYNYLIPDVLSEL 354

Query: 372 EKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
            +K +    DG   ++ +   S P+   KS+G F Y ++DLAA+ QRI +  ADWI+YVT
Sbjct: 355 IEKEIAVQSDGALCIFADGSDS-PLICRKSNGSFNYASTDLAALWQRISDLCADWIIYVT 413

Query: 432 D 432
           D
Sbjct: 414 D 414



 Score =  263 bits (673), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 153/361 (42%), Positives = 217/361 (60%), Gaps = 30/361 (8%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+R  +  +F+ A  V FP        +A  + +     GD+QCN AM +    KD+G+ 
Sbjct: 70   SLRSTMKLMFSQAGNVVFPGESSLDFEIAECSNR---ALGDYQCNSAMKIFAELKDRGDT 126

Query: 1163 --KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII-- 1218
              KNP  +A++I   +       P+     +K+ VA PGF+N+  SR +  ++   +   
Sbjct: 127  RFKNPRSLAEAIIQAI-------PAENSFFEKLAVAGPGFINITFSREFLAQEALRVFHC 179

Query: 1219 -VNGVQPPTLN-KKL---RVLVDFSSPNIAKEM---HVGHLRSTIIGDTISRLLEYLGHD 1270
              +G    T   +KL   R +VD+SSPNIAKEM   HVGHLRSTIIG+TI R LE++G +
Sbjct: 180  SADGTFETTRKFRKLTAKRAVVDYSSPNIAKEMQEMHVGHLRSTIIGETICRALEFVGVE 239

Query: 1271 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKR 1328
            V+RLNHVGDWGTQFGML+AHL+D     +++S    + +LQ  YK+SK RFD DE FKKR
Sbjct: 240  VIRLNHVGDWGTQFGMLLAHLED-----ISESSDFEVKNLQELYKQSKIRFDSDEDFKKR 294

Query: 1329 AYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYL 1388
            A   VV LQ  D   K+ W  IC+VSR+DF++IY  L+V + ERGES+Y   +  ++  L
Sbjct: 295  ARAAVVHLQAGDKHLKEKWTDICEVSRQDFEEIYRLLDVHILERGESYYNYLIPDVLSEL 354

Query: 1389 EKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
             +K +    DG   ++ +   S P+   KS+G F Y ++DLAA+ QRI +  ADWI+YVT
Sbjct: 355  IEKEIAVQSDGALCIFADGSDS-PLICRKSNGSFNYASTDLAALWQRISDLCADWIIYVT 413

Query: 1449 D 1449
            D
Sbjct: 414  D 414


>gi|159902746|ref|YP_001550090.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687135|sp|A9BDF0.1|SYR_PROM4 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|159887922|gb|ABX08136.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 603

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/606 (41%), Positives = 365/606 (60%), Gaps = 46/606 (7%)

Query: 488  AVQVAFPELG-DKTASVASTNEKYVH----KFGDFQCNDAMALCKIFKDKGEKKNPFDIA 542
            A++ AFP+       S  S N + V     +FGDFQ N A+AL KI K     K P  IA
Sbjct: 15   ALEAAFPQASLVAKQSGQSLNPQLVPATKPEFGDFQVNGALALSKILK-----KAPRKIA 69

Query: 543  QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------KDIIVNGVQ 596
            + I      +L  N    K+  K E+A PGF+N+ +       +I        + V   +
Sbjct: 70   EEI----IKQLVKNDDFNKLCLKPEIAGPGFINLTIQNSCLTTEICARLNDDHLGVPIAK 125

Query: 597  PPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            P   +K L+ ++VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 126  PLKTHKSLKPIVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHPVLRLNHVGDWGT 185

Query: 656  QFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            QFGMLI +L+   P+ LT +  I   DL  FY+++KK FDEDE F+  + + VV LQ  D
Sbjct: 186  QFGMLITYLKLVAPEALTTANAINLGDLVKFYRQAKKLFDEDETFQDASREEVVRLQNGD 245

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
            P   KAW+++CD SR +F+KIY RL++ +TERGESFY ++++ ++  L+   LL  D+G 
Sbjct: 246  PQSLKAWQLLCDQSRIEFEKIYKRLDIHITERGESFYNQYLQDVIDDLKSTNLLVTDNGA 305

Query: 774  KIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVYVTDLG 824
            K ++     G+D   +P+ + K+DGGF Y T+DLAAIR R++     + A  ++YVTD G
Sbjct: 306  KCIFLDDITGKDGKPLPLIVQKTDGGFNYATTDLAAIRYRLQAYPQGDGACRLIYVTDAG 365

Query: 825  QGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
            Q  HF  + + A++A  + PN  R++ V FG+V GED KK KTRSGDTV+L +LLDE + 
Sbjct: 366  QASHFFAVFQVARRANWI-PNDCRIEHVPFGLVQGEDGKKLKTRSGDTVRLKDLLDEAII 424

Query: 885  RSLDKLKDK-NRHTELTPTE-LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            R+ + L+++ N        E +++  + +    +KYADLS NR  +Y FSF++ML  +GN
Sbjct: 425  RAKNDLEERLNAEGRKEDQEFINKVSRVIGIAAVKYADLSQNRITNYQFSFNRMLALQGN 484

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA YLLYA  RIA I R  G       + A    ++    +E+ LA+ LL+ ++V++ V 
Sbjct: 485  TAPYLLYALVRIAGINRKGG------SLNATINKLTFNEPQEWMLARELLKFDEVILQVE 538

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
             +L  + LC YL+++S  F+ FYD    ++ +      ++   RL L + TA  +K    
Sbjct: 539  EELLPNRLCNYLFELSQVFNRFYDQVPVLKAN-----DSLKASRLALCQLTADTIKLGLK 593

Query: 1063 ILNIRT 1068
            +L I T
Sbjct: 594  LLGIPT 599



 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/358 (44%), Positives = 223/358 (62%), Gaps = 32/358 (8%)

Query: 98  AVQVAFPELG-DKTASVASTNEKYVH----KFGDFQCNDAMALCKIFKDKGEKKNPFDIA 152
           A++ AFP+       S  S N + V     +FGDFQ N A+AL KI K     K P  IA
Sbjct: 15  ALEAAFPQASLVAKQSGQSLNPQLVPATKPEFGDFQVNGALALSKILK-----KAPRKIA 69

Query: 153 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------KDIIVNGVQ 206
           + I      +L  N    K+  K E+A PGF+N+ +       +I        + V   +
Sbjct: 70  EEI----IKQLVKNDDFNKLCLKPEIAGPGFINLTIQNSCLTTEICARLNDDHLGVPIAK 125

Query: 207 PPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
           P   +K L+ ++VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 126 PLKTHKSLKPIVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHPVLRLNHVGDWGT 185

Query: 266 QFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           QFGMLI +L+   P+ LT +  I   DL  FY+++KK FDEDE F+  + + VV LQ  D
Sbjct: 186 QFGMLITYLKLVAPEALTTANAINLGDLVKFYRQAKKLFDEDETFQDASREEVVRLQNGD 245

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
           P   KAW+++CD SR +F+KIY RL++ +TERGESFY ++++ ++  L+   LL  D+G 
Sbjct: 246 PQSLKAWQLLCDQSRIEFEKIYKRLDIHITERGESFYNQYLQDVIDDLKSTNLLVTDNGA 305

Query: 384 KIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVYVTD 432
           K ++     G+D   +P+ + K+DGGF Y T+DLAAIR R++     + A  ++YVTD
Sbjct: 306 KCIFLDDITGKDGKPLPLIVQKTDGGFNYATTDLAAIRYRLQAYPQGDGACRLIYVTD 363



 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/358 (44%), Positives = 223/358 (62%), Gaps = 32/358 (8%)

Query: 1115 AVQVAFPELG-DKTASVASTNEKYVH----KFGDFQCNDAMALCKIFKDKGEKKNPFDIA 1169
            A++ AFP+       S  S N + V     +FGDFQ N A+AL KI K     K P  IA
Sbjct: 15   ALEAAFPQASLVAKQSGQSLNPQLVPATKPEFGDFQVNGALALSKILK-----KAPRKIA 69

Query: 1170 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------KDIIVNGVQ 1223
            + I      +L  N    K+  K E+A PGF+N+ +       +I        + V   +
Sbjct: 70   EEI----IKQLVKNDDFNKLCLKPEIAGPGFINLTIQNSCLTTEICARLNDDHLGVPIAK 125

Query: 1224 PPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            P   +K L+ ++VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 126  PLKTHKSLKPIVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHPVLRLNHVGDWGT 185

Query: 1283 QFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            QFGMLI +L+   P+ LT +  I   DL  FY+++KK FDEDE F+  + + VV LQ  D
Sbjct: 186  QFGMLITYLKLVAPEALTTANAINLGDLVKFYRQAKKLFDEDETFQDASREEVVRLQNGD 245

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
            P   KAW+++CD SR +F+KIY RL++ +TERGESFY ++++ ++  L+   LL  D+G 
Sbjct: 246  PQSLKAWQLLCDQSRIEFEKIYKRLDIHITERGESFYNQYLQDVIDDLKSTNLLVTDNGA 305

Query: 1401 KIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVYVTD 1449
            K ++     G+D   +P+ + K+DGGF Y T+DLAAIR R++     + A  ++YVTD
Sbjct: 306  KCIFLDDITGKDGKPLPLIVQKTDGGFNYATTDLAAIRYRLQAYPQGDGACRLIYVTD 363


>gi|219119306|ref|XP_002180416.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407889|gb|EEC47824.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 573

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/580 (41%), Positives = 340/580 (58%), Gaps = 43/580 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM L K         +P + A  I        A  P +   +++ E+A PG
Sbjct: 9    EFGDYQVNAAMGLAKALN-----LSPRECAAQIVK------ALQPKIQSFMEEPEIAGPG 57

Query: 573  FVNVFLSRVYAGEQIKDIIVNG---VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            FVN+     Y  + +  +  +    +  P   +  +++VDFSSPNIAKEMHVGHLRSTII
Sbjct: 58   FVNLRFRTSYLTQAVSSMAGDAQGRLAVPRTAQTQKIVVDFSSPNIAKEMHVGHLRSTII 117

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP----IADLQAFY 685
            GDT+  +LE+ GH+V RLNHVGDWGTQFGML+ HL+D++P  L         + DL   Y
Sbjct: 118  GDTLCNVLEFAGHEVTRLNHVGDWGTQFGMLVEHLRDEYPAALRSDTADDVDLGDLVQLY 177

Query: 686  KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTE 744
            K +KKRFDED+ FK RA + VV LQ  + +   AWE +C  SR+++QKIYDRL +  L E
Sbjct: 178  KAAKKRFDEDDEFKTRAREGVVKLQAGNEEELAAWESLCAASRKEYQKIYDRLQIEGLVE 237

Query: 745  RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDT 799
            RGESFY   ++ +V  L +KGL    DG  +++ E     D   +PM + KSDGGF Y T
Sbjct: 238  RGESFYNPFLKDVVDELVEKGLAVESDGALVVYLEGYTNRDGSPLPMIVRKSDGGFNYAT 297

Query: 800  SDLAAIRQRI------EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
            +DLAA+R R         E+AD ++YVTD GQ  HF ++ E  K AG      + ++ V 
Sbjct: 298  TDLAAMRHRTLMPRAESGERADRVLYVTDAGQAQHFEMVFEAGKVAGFCREGAS-LEHVP 356

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE-LSEAQQAVA 912
            FG+V GED KKF TRSG+TVKL +LLDE +R S   LK +N + +    + +    + V 
Sbjct: 357  FGLVQGEDGKKFATRSGETVKLKDLLDEAVRISGADLKKRNENVDQEFLDRVDNVARIVG 416

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTA----GINSEDL 968
             G +KYADLS NR  +Y FS+D+ML   GNTA Y+LYAY R+  I R A    G  + D 
Sbjct: 417  IGAVKYADLSMNRESNYRFSYDRMLSLNGNTAPYMLYAYARVCGIIRKASGQEGTGAIDW 476

Query: 969  RVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNC 1028
              A++   + + HE E  L + L+++ DVL  V R+L  + +C+YL++ S  F++FY++C
Sbjct: 477  PKASE---IMITHESELELIRNLVKLPDVLNEVERELYPNRMCDYLFETSQKFNQFYESC 533

Query: 1029 YCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               + ++E     +   RL L  ATA  ++    +L I T
Sbjct: 534  SVNKAESE----EIKASRLSLCTATAGTIRLLLTLLGIET 569



 Score =  266 bits (680), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 197/329 (59%), Gaps = 30/329 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM L K         +P + A  I        A  P +   +++ E+A PG
Sbjct: 9   EFGDYQVNAAMGLAKALN-----LSPRECAAQIVK------ALQPKIQSFMEEPEIAGPG 57

Query: 183 FVNVFLSRVYAGEQIKDIIVNG---VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           FVN+     Y  + +  +  +    +  P   +  +++VDFSSPNIAKEMHVGHLRSTII
Sbjct: 58  FVNLRFRTSYLTQAVSSMAGDAQGRLAVPRTAQTQKIVVDFSSPNIAKEMHVGHLRSTII 117

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP----IADLQAFY 295
           GDT+  +LE+ GH+V RLNHVGDWGTQFGML+ HL+D++P  L         + DL   Y
Sbjct: 118 GDTLCNVLEFAGHEVTRLNHVGDWGTQFGMLVEHLRDEYPAALRSDTADDVDLGDLVQLY 177

Query: 296 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTE 354
           K +KKRFDED+ FK RA + VV LQ  + +   AWE +C  SR+++QKIYDRL +  L E
Sbjct: 178 KAAKKRFDEDDEFKTRAREGVVKLQAGNEEELAAWESLCAASRKEYQKIYDRLQIEGLVE 237

Query: 355 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDT 409
           RGESFY   ++ +V  L +KGL    DG  +++ E     D   +PM + KSDGGF Y T
Sbjct: 238 RGESFYNPFLKDVVDELVEKGLAVESDGALVVYLEGYTNRDGSPLPMIVRKSDGGFNYAT 297

Query: 410 SDLAAIRQRI------EEEKADWIVYVTD 432
           +DLAA+R R         E+AD ++YVTD
Sbjct: 298 TDLAAMRHRTLMPRAESGERADRVLYVTD 326



 Score =  266 bits (680), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 197/329 (59%), Gaps = 30/329 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM L K         +P + A  I        A  P +   +++ E+A PG
Sbjct: 9    EFGDYQVNAAMGLAKALN-----LSPRECAAQIVK------ALQPKIQSFMEEPEIAGPG 57

Query: 1200 FVNVFLSRVYAGEQIKDIIVNG---VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            FVN+     Y  + +  +  +    +  P   +  +++VDFSSPNIAKEMHVGHLRSTII
Sbjct: 58   FVNLRFRTSYLTQAVSSMAGDAQGRLAVPRTAQTQKIVVDFSSPNIAKEMHVGHLRSTII 117

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP----IADLQAFY 1312
            GDT+  +LE+ GH+V RLNHVGDWGTQFGML+ HL+D++P  L         + DL   Y
Sbjct: 118  GDTLCNVLEFAGHEVTRLNHVGDWGTQFGMLVEHLRDEYPAALRSDTADDVDLGDLVQLY 177

Query: 1313 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV-TLTE 1371
            K +KKRFDED+ FK RA + VV LQ  + +   AWE +C  SR+++QKIYDRL +  L E
Sbjct: 178  KAAKKRFDEDDEFKTRAREGVVKLQAGNEEELAAWESLCAASRKEYQKIYDRLQIEGLVE 237

Query: 1372 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDT 1426
            RGESFY   ++ +V  L +KGL    DG  +++ E     D   +PM + KSDGGF Y T
Sbjct: 238  RGESFYNPFLKDVVDELVEKGLAVESDGALVVYLEGYTNRDGSPLPMIVRKSDGGFNYAT 297

Query: 1427 SDLAAIRQRI------EEEKADWIVYVTD 1449
            +DLAA+R R         E+AD ++YVTD
Sbjct: 298  TDLAAMRHRTLMPRAESGERADRVLYVTD 326


>gi|302763517|ref|XP_002965180.1| hypothetical protein SELMODRAFT_83543 [Selaginella moellendorffii]
 gi|300167413|gb|EFJ34018.1| hypothetical protein SELMODRAFT_83543 [Selaginella moellendorffii]
          Length = 578

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/597 (39%), Positives = 353/597 (59%), Gaps = 36/597 (6%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD-KGE 534
            SVR+ +S +F  A +    E       V + N     KFGD+Q N+AM +    K  +  
Sbjct: 6    SVRNEISQIFQAAFRSTVGEWVSVEPIVIACNNP---KFGDYQINNAMGIWSRIKGMQST 62

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP  +AQ +          N     +++K  VA  G++NV LS  +  E++  ++  G
Sbjct: 63   YGNPVSVAQDVLR--------NIPRTSMLEKTSVAGAGYINVTLSARFIAEKLTTVLHQG 114

Query: 595  VQP--PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
            V    P L  K   LVDFSSPNIAKE+HVGHLRST+IGD+++++LE+    V+R NHVGD
Sbjct: 115  VDALAPELPVK-HALVDFSSPNIAKELHVGHLRSTVIGDSVAKMLEFCNVSVMRRNHVGD 173

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGTQFGML+ H+ +   +       I DLQ  Y E+ +RF  DE FK +A Q VV LQR 
Sbjct: 174  WGTQFGMLLEHIFETGAEV----EAIGDLQKMYVEASERFKSDEQFKAKAQQGVVKLQRS 229

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
            + +Y   W+ +CDVSRR +++ Y RLNV+L E+ ESFY  ++   +  LE+KGLL+  DG
Sbjct: 230  EAEYHAKWKSLCDVSRRAYERTYGRLNVSLEEKAESFYHPYIPYAIKSLEEKGLLQESDG 289

Query: 773  RKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
             ++++  G D   IP+ + K+DG +TY ++DLAA+  R+  EKA+WI+YVTD+GQ  HF 
Sbjct: 290  ARVIFLKGYD---IPLIVTKTDGAYTYASTDLAALWYRVHVEKAEWIIYVTDVGQKQHFD 346

Query: 831  LLEECAKKAGILNPNK-TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            +  + AK AG L  +   +   +GFG+VLGED K+ + R G  V L+ LLD+   RS  +
Sbjct: 347  MFFQAAKLAGWLPEHGFPKAQHIGFGMVLGEDGKRIRGRKGG-VLLANLLDDAKSRSHKE 405

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            L ++ R  E +  +L  A +A+ YG +KYADL +NR   Y F F++MLD +GNTAVYL Y
Sbjct: 406  LIERGRKGEWSGEDLEAAAEALGYGAVKYADLKNNRETTYRFDFEQMLDIKGNTAVYLFY 465

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            AY R+ SI R +G + ++++   Q+  + +EH  E +L   L++  + +      L    
Sbjct: 466  AYARVCSIIRKSGRSIDEIK---QTCELVVEHPHERSLGLHLVQFTETVEDSISRLLPST 522

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            LC+YLY +S  F++FY +C        G ++     RLLL EAT  +MK+  ++L +
Sbjct: 523  LCDYLYTLSELFTQFYTSC-----KVNGSLQ--EASRLLLCEATRLIMKQGLELLGL 572



 Score =  271 bits (692), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/352 (41%), Positives = 212/352 (60%), Gaps = 24/352 (6%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD-KGE 144
           SVR+ +S +F  A +    E       V + N     KFGD+Q N+AM +    K  +  
Sbjct: 6   SVRNEISQIFQAAFRSTVGEWVSVEPIVIACNNP---KFGDYQINNAMGIWSRIKGMQST 62

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP  +AQ +          N     +++K  VA  G++NV LS  +  E++  ++  G
Sbjct: 63  YGNPVSVAQDVLR--------NIPRTSMLEKTSVAGAGYINVTLSARFIAEKLTTVLHQG 114

Query: 205 VQP--PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           V    P L  K   LVDFSSPNIAKE+HVGHLRST+IGD+++++LE+    V+R NHVGD
Sbjct: 115 VDALAPELPVK-HALVDFSSPNIAKELHVGHLRSTVIGDSVAKMLEFCNVSVMRRNHVGD 173

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGTQFGML+ H+ +   +       I DLQ  Y E+ +RF  DE FK +A Q VV LQR 
Sbjct: 174 WGTQFGMLLEHIFETGAEV----EAIGDLQKMYVEASERFKSDEQFKAKAQQGVVKLQRS 229

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
           + +Y   W+ +CDVSRR +++ Y RLNV+L E+ ESFY  ++   +  LE+KGLL+  DG
Sbjct: 230 EAEYHAKWKSLCDVSRRAYERTYGRLNVSLEEKAESFYHPYIPYAIKSLEEKGLLQESDG 289

Query: 383 RKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            ++++  G D   IP+ + K+DG +TY ++DLAA+  R+  EKA+WI+YVTD
Sbjct: 290 ARVIFLKGYD---IPLIVTKTDGAYTYASTDLAALWYRVHVEKAEWIIYVTD 338



 Score =  271 bits (692), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/352 (41%), Positives = 212/352 (60%), Gaps = 24/352 (6%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD-KGE 1161
            SVR+ +S +F  A +    E       V + N     KFGD+Q N+AM +    K  +  
Sbjct: 6    SVRNEISQIFQAAFRSTVGEWVSVEPIVIACNNP---KFGDYQINNAMGIWSRIKGMQST 62

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP  +AQ +          N     +++K  VA  G++NV LS  +  E++  ++  G
Sbjct: 63   YGNPVSVAQDVLR--------NIPRTSMLEKTSVAGAGYINVTLSARFIAEKLTTVLHQG 114

Query: 1222 VQP--PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            V    P L  K   LVDFSSPNIAKE+HVGHLRST+IGD+++++LE+    V+R NHVGD
Sbjct: 115  VDALAPELPVK-HALVDFSSPNIAKELHVGHLRSTVIGDSVAKMLEFCNVSVMRRNHVGD 173

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGTQFGML+ H+ +   +       I DLQ  Y E+ +RF  DE FK +A Q VV LQR 
Sbjct: 174  WGTQFGMLLEHIFETGAEV----EAIGDLQKMYVEASERFKSDEQFKAKAQQGVVKLQRS 229

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
            + +Y   W+ +CDVSRR +++ Y RLNV+L E+ ESFY  ++   +  LE+KGLL+  DG
Sbjct: 230  EAEYHAKWKSLCDVSRRAYERTYGRLNVSLEEKAESFYHPYIPYAIKSLEEKGLLQESDG 289

Query: 1400 RKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++++  G D   IP+ + K+DG +TY ++DLAA+  R+  EKA+WI+YVTD
Sbjct: 290  ARVIFLKGYD---IPLIVTKTDGAYTYASTDLAALWYRVHVEKAEWIIYVTD 338


>gi|31747865|gb|AAN10190.1| argynyl tRNA synthetase [Candidatus Fritschea bemisiae]
          Length = 578

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/599 (40%), Positives = 360/599 (60%), Gaps = 39/599 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            LS++       +  ++    A +A   +    +FG +QCN AM L K        ++P +
Sbjct: 4    LSEILQARATDSLKKILKSDAPLAEIVQSTHPQFGHYQCNSAMELAK-----KTSRHPRE 58

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQP 597
            IA+ I          N  L + ++K+EVA PGFVN+ L + +  +++  +  +   G  P
Sbjct: 59   IAEQIVK--------NWGLDERVEKLEVAGPGFVNITLKKEFLDQELNRLATDRRLGASP 110

Query: 598  PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
              L K+ +++V+FSSPNIAKE+HVGHLRSTIIG++++RL E+LGH V+RLNH+GDWGTQF
Sbjct: 111  --LKKRKKIIVEFSSPNIAKELHVGHLRSTIIGESLARLFEFLGHQVLRLNHIGDWGTQF 168

Query: 658  GMLIAHLQDKFPDYLTKSPPIADLQA---FYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            GMLIA+L++ F   +      ADL A   +Y+ESKK FD +  FKKRA   VV LQ+ + 
Sbjct: 169  GMLIAYLKE-FQKEVLSGEKKADLPALMDWYRESKKLFDTNPAFKKRAQIEVVNLQKKEK 227

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            +    WE I ++SR+ FQ+IYD L+V+L ERGES+Y + + +++   E KG++++ DG K
Sbjct: 228  EALAVWETIREISRKGFQEIYDWLDVSLIERGESYYNETLPKVIEEYEAKGIIQISDGAK 287

Query: 775  IMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
             ++     G+D+  +P+ + KSDGG+ Y T+D AA+ QRI  EK D I+YV D GQ +HF
Sbjct: 288  CVFLEGFKGKDQAPLPLILQKSDGGYNYATTDTAALFQRIHIEKGDRILYVVDAGQRLHF 347

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            +++   A KAG  +P +  ++ V FGVVLG D KKFKTRSG T KL +LL E + R+  K
Sbjct: 348  QMVFAAAFKAGYYDPARVEIEHVPFGVVLGADGKKFKTRSGQTEKLIDLLKEAVYRA--K 405

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            +  KNR   +   +L +  + +    +KYADLS +R  DY+F++D+ML+  GNTA YLLY
Sbjct: 406  ILLKNRLPSVEEKDLEKLAKILGINSVKYADLSCHRLKDYIFNYDRMLNFEGNTAAYLLY 465

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            +Y RI  I      N + L   + S  + L H  E AL   L +  + L L+ RDL  + 
Sbjct: 466  SYVRIQGIKEKCNRNIDLL---SHSARIQLTHPTEIALGLKLRQFGEALTLMDRDLLPNR 522

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            L +YLY ++  F  F+ +C       E         RLLL E T+++++K   IL ++T
Sbjct: 523  LSDYLYHLAEKFHAFFRDCRVKGSPQE-------DSRLLLCELTSQILQKGLYILGLKT 574



 Score =  271 bits (692), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/367 (41%), Positives = 229/367 (62%), Gaps = 29/367 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           LS++       +  ++    A +A   +    +FG +QCN AM L K        ++P +
Sbjct: 4   LSEILQARATDSLKKILKSDAPLAEIVQSTHPQFGHYQCNSAMELAK-----KTSRHPRE 58

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQP 207
           IA+ I          N  L + ++K+EVA PGFVN+ L + +  +++  +  +   G  P
Sbjct: 59  IAEQIVK--------NWGLDERVEKLEVAGPGFVNITLKKEFLDQELNRLATDRRLGASP 110

Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
             L K+ +++V+FSSPNIAKE+HVGHLRSTIIG++++RL E+LGH V+RLNH+GDWGTQF
Sbjct: 111 --LKKRKKIIVEFSSPNIAKELHVGHLRSTIIGESLARLFEFLGHQVLRLNHIGDWGTQF 168

Query: 268 GMLIAHLQDKFPDYLTKSPPIADLQA---FYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           GMLIA+L++ F   +      ADL A   +Y+ESKK FD +  FKKRA   VV LQ+ + 
Sbjct: 169 GMLIAYLKE-FQKEVLSGEKKADLPALMDWYRESKKLFDTNPAFKKRAQIEVVNLQKKEK 227

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
           +    WE I ++SR+ FQ+IYD L+V+L ERGES+Y + + +++   E KG++++ DG K
Sbjct: 228 EALAVWETIREISRKGFQEIYDWLDVSLIERGESYYNETLPKVIEEYEAKGIIQISDGAK 287

Query: 385 IMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYH 437
            ++     G+D+  +P+ + KSDGG+ Y T+D AA+ QRI  EK D I+YV D   R + 
Sbjct: 288 CVFLEGFKGKDQAPLPLILQKSDGGYNYATTDTAALFQRIHIEKGDRILYVVDAGQRLHF 347

Query: 438 QVLQAIA 444
           Q++ A A
Sbjct: 348 QMVFAAA 354



 Score =  270 bits (690), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 147/353 (41%), Positives = 222/353 (62%), Gaps = 27/353 (7%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            LS++       +  ++    A +A   +    +FG +QCN AM L K        ++P +
Sbjct: 4    LSEILQARATDSLKKILKSDAPLAEIVQSTHPQFGHYQCNSAMELAK-----KTSRHPRE 58

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQP 1224
            IA+ I          N  L + ++K+EVA PGFVN+ L + +  +++  +  +   G  P
Sbjct: 59   IAEQIVK--------NWGLDERVEKLEVAGPGFVNITLKKEFLDQELNRLATDRRLGASP 110

Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
              L K+ +++V+FSSPNIAKE+HVGHLRSTIIG++++RL E+LGH V+RLNH+GDWGTQF
Sbjct: 111  --LKKRKKIIVEFSSPNIAKELHVGHLRSTIIGESLARLFEFLGHQVLRLNHIGDWGTQF 168

Query: 1285 GMLIAHLQDKFPDYLTKSPPIADLQA---FYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            GMLIA+L++ F   +      ADL A   +Y+ESKK FD +  FKKRA   VV LQ+ + 
Sbjct: 169  GMLIAYLKE-FQKEVLSGEKKADLPALMDWYRESKKLFDTNPAFKKRAQIEVVNLQKKEK 227

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            +    WE I ++SR+ FQ+IYD L+V+L ERGES+Y + + +++   E KG++++ DG K
Sbjct: 228  EALAVWETIREISRKGFQEIYDWLDVSLIERGESYYNETLPKVIEEYEAKGIIQISDGAK 287

Query: 1402 IMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++     G+D+  +P+ + KSDGG+ Y T+D AA+ QRI  EK D I+YV D
Sbjct: 288  CVFLEGFKGKDQAPLPLILQKSDGGYNYATTDTAALFQRIHIEKGDRILYVVD 340


>gi|33864335|ref|NP_895895.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|39932085|sp|Q7V493.1|SYR_PROMM RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|33641115|emb|CAE22244.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 612

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 253/629 (40%), Positives = 354/629 (56%), Gaps = 66/629 (10%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMA 524
            +S+   L      A+  AFPE            D   + AS  E     FGDFQ N A+ 
Sbjct: 11   LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPE-----FGDFQANAALP 65

Query: 525  LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 584
            L K  K            + IA+ +  +L  + +   +    E+A PGF+N+ +      
Sbjct: 66   LAKPLKQP---------PRQIAAAIVDQLMVDTAFTAICLTPEIAGPGFINLTVRPECLA 116

Query: 585  EQIKDIIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
             +++  +             N  Q PT      V+VDFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 117  AEVQARLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDS 171

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKK 690
            ++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL  FY+++K+
Sbjct: 172  LARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQ 231

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 750
            RFD+DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL+V L ERGESFY
Sbjct: 232  RFDDDEAFQTTSREEVVKLQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFY 291

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 805
              ++E +V  L   GLL  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAA+
Sbjct: 292  NAYLESVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAM 351

Query: 806  RQRI----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            R R     + + A  ++YVTD GQ  HF  + + A++AG + P+  R+  V FG+V GED
Sbjct: 352  RYRFAAPPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWI-PDAGRLQHVPFGLVQGED 410

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYA 919
             KK KTR+GDTV+L ELLDE + R+   L+ + +       E  + +    V    +KYA
Sbjct: 411  GKKLKTRAGDTVRLRELLDEAVERAESDLRRRLQEEGRDEDESFIEQVATTVGLAAVKYA 470

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  +Y FSFD+ML  +GNTA YLLYA  RIA IAR  G    DL V   +  +  
Sbjct: 471  DLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG----DLDVT--TAELQF 524

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
               +E+AL + LL+ + V+  V  +L  + LC YL+++S  F+ FYD    ++ +   + 
Sbjct: 525  SETQEWALVRELLKFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYDQVPVLKAEQPSR- 583

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                + RL L   TA  +K    +L I T
Sbjct: 584  ----SCRLALCRLTADTLKLGLSLLGIPT 608



 Score =  272 bits (696), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 158/381 (41%), Positives = 217/381 (56%), Gaps = 52/381 (13%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMA 134
           +S+   L      A+  AFPE            D   + AS  E     FGDFQ N A+ 
Sbjct: 11  LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPE-----FGDFQANAALP 65

Query: 135 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 194
           L K  K            + IA+ +  +L  + +   +    E+A PGF+N+ +      
Sbjct: 66  LAKPLKQP---------PRQIAAAIVDQLMVDTAFTAICLTPEIAGPGFINLTVRPECLA 116

Query: 195 EQIKDIIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
            +++  +             N  Q PT      V+VDFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 117 AEVQARLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDS 171

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKK 300
           ++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL  FY+++K+
Sbjct: 172 LARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQ 231

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 360
           RFD+DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL+V L ERGESFY
Sbjct: 232 RFDDDEAFQTTSREEVVKLQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFY 291

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 415
             ++E +V  L   GLL  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAA+
Sbjct: 292 NAYLESVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAM 351

Query: 416 RQRI----EEEKADWIVYVTD 432
           R R     + + A  ++YVTD
Sbjct: 352 RYRFAAPPQGDGARRVIYVTD 372



 Score =  272 bits (696), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 158/381 (41%), Positives = 217/381 (56%), Gaps = 52/381 (13%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMA 1151
            +S+   L      A+  AFPE            D   + AS  E     FGDFQ N A+ 
Sbjct: 11   LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPE-----FGDFQANAALP 65

Query: 1152 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 1211
            L K  K            + IA+ +  +L  + +   +    E+A PGF+N+ +      
Sbjct: 66   LAKPLKQP---------PRQIAAAIVDQLMVDTAFTAICLTPEIAGPGFINLTVRPECLA 116

Query: 1212 EQIKDIIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
             +++  +             N  Q PT      V+VDFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 117  AEVQARLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDS 171

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKK 1317
            ++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL  FY+++K+
Sbjct: 172  LARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQ 231

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
            RFD+DE F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL+V L ERGESFY
Sbjct: 232  RFDDDEAFQTTSREEVVKLQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFY 291

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 1432
              ++E +V  L   GLL  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAA+
Sbjct: 292  NAYLESVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAM 351

Query: 1433 RQRI----EEEKADWIVYVTD 1449
            R R     + + A  ++YVTD
Sbjct: 352  RYRFAAPPQGDGARRVIYVTD 372


>gi|126695545|ref|YP_001090431.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126542588|gb|ABO16830.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 604

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/581 (42%), Positives = 352/581 (60%), Gaps = 47/581 (8%)

Query: 512  HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
             +FGD+QCN  ++L KIFK     KNP DI+    ++    L  N S+AK+   +E+A P
Sbjct: 43   EEFGDYQCNVCLSLSKIFK-----KNPRDISNDFINL----LKKNKSIAKLCKSLEIAGP 93

Query: 572  GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 624
            GF+N+ L   V   E I +I  N    P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDEVLINEIISNIQCNRAGIPLIRKDLDRGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 625  RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 682
            RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 683  AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
             FYKESKKRFD +  F+KR+ + VV LQ  D    KAW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKESKKRFDNESEFQKRSREEVVKLQSGDIKSIKAWKLLCDQSRQEFDEIYKNLKIKI 273

Query: 743  TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 797
             ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274  EERGESFYNPFLKSVIDDLNLKKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 798  DTSDLAAIRQRIEE----EKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
             T+DLAAIR R  +    + A  I+YVTD GQ  HF  + + AKKA  + P   ++D V 
Sbjct: 334  ATTDLAAIRYRFNKPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWI-PENCQVDHVP 392

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQ 909
            FG+V G D KK KTR G+T++L +LL+E +RR+    L +L+D++R+       ++   +
Sbjct: 393  FGLVQGIDGKKLKTREGETIRLKDLLNEAVRRAKEDLLKRLEDEDRYE--NEEFIANTSR 450

Query: 910  AVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGI--NSED 967
             + +G +KYADLS NR  +Y FSFDKML   GNTA YLLY   RI  I R      +S+D
Sbjct: 451  IIGFGAVKYADLSQNRITNYQFSFDKMLSLNGNTAPYLLYTLVRILGIKRKNDFVYDSKD 510

Query: 968  LRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDN 1027
             +       V+ E++ E+ L + LL+ ++V++ + +DL  + LC YL+++   F+ FYD 
Sbjct: 511  FQY------VNYENKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYDQ 564

Query: 1028 CYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               ++++     K +   RL L + TAK +K   ++L I T
Sbjct: 565  VPILKEE-----KNIKISRLNLCDLTAKTLKLSLELLGIET 600



 Score =  276 bits (707), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 155/330 (46%), Positives = 207/330 (62%), Gaps = 27/330 (8%)

Query: 122 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
            +FGD+QCN  ++L KIFK     KNP DI+    ++    L  N S+AK+   +E+A P
Sbjct: 43  EEFGDYQCNVCLSLSKIFK-----KNPRDISNDFINL----LKKNKSIAKLCKSLEIAGP 93

Query: 182 GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 234
           GF+N+ L   V   E I +I  N    P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94  GFINIKLKDEVLINEIISNIQCNRAGIPLIRKDLDRGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 235 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 292
           RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154 RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FYKESKKRFD +  F+KR+ + VV LQ  D    KAW+++CD SR++F +IY  L + +
Sbjct: 214 EFYKESKKRFDNESEFQKRSREEVVKLQSGDIKSIKAWKLLCDQSRQEFDEIYKNLKIKI 273

Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 407
            ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274 EERGESFYNPFLKSVIDDLNLKKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 408 DTSDLAAIRQRIEE----EKADWIVYVTDH 433
            T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334 ATTDLAAIRYRFNKPPNGDDASRIIYVTDH 363



 Score =  276 bits (707), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 155/330 (46%), Positives = 207/330 (62%), Gaps = 27/330 (8%)

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             +FGD+QCN  ++L KIFK     KNP DI+    ++    L  N S+AK+   +E+A P
Sbjct: 43   EEFGDYQCNVCLSLSKIFK-----KNPRDISNDFINL----LKKNKSIAKLCKSLEIAGP 93

Query: 1199 GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 1251
            GF+N+ L   V   E I +I  N    P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDEVLINEIISNIQCNRAGIPLIRKDLDRGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 1252 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 1309
            RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FYKESKKRFD +  F+KR+ + VV LQ  D    KAW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKESKKRFDNESEFQKRSREEVVKLQSGDIKSIKAWKLLCDQSRQEFDEIYKNLKIKI 273

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 1424
             ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274  EERGESFYNPFLKSVIDDLNLKKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 1425 DTSDLAAIRQRIEE----EKADWIVYVTDH 1450
             T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334  ATTDLAAIRYRFNKPPNGDDASRIIYVTDH 363


>gi|330444190|ref|YP_004377176.1| arginyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807300|gb|AEB41473.1| arginyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 564

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 249/593 (41%), Positives = 352/593 (59%), Gaps = 35/593 (5%)

Query: 476  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            S+   LS +   A+ +AFPE+      V  + ++    FG +QCNDAM L ++ K     
Sbjct: 3    SLLSELSVLCHQALSLAFPEVKGWEPEVTPSTKEL---FGHYQCNDAMKLARVLK----- 54

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
            + P  IA++I S +  +        +  D IE+A  GF+N   S  +  E++        
Sbjct: 55   QAPRSIAEAIVSHLPHK--------EFFDSIEIAGAGFINFTFSSKFLTERLNSFSSTLA 106

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
                +     +++DFSSPNIAK+MHVGHLRSTIIG+ ++R+L Y+G+ V+RLNH+GDWGT
Sbjct: 107  SGLRVEHPQNIVIDFSSPNIAKDMHVGHLRSTIIGECLARILSYVGNSVLRLNHIGDWGT 166

Query: 656  QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
             FGMLIA +++  P+       + DL   YK + KRF E+E FKKRA Q VVALQ  +P 
Sbjct: 167  AFGMLIAFIEES-PEE-ANLDNLKDLTELYKRAHKRFAEEEAFKKRAQQRVVALQAQEPQ 224

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
                W+ IC++S + FQ+IYD L++TL +RGESFY   + +++  LE K L+ L D  K 
Sbjct: 225  ALALWKKICEISEKAFQQIYDILDITLEKRGESFYNPFLPEVIQDLESKHLITLSDKAKC 284

Query: 776  MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
            ++ E   SIP  + KSDGG+ Y T+DLAA+R R+E + A+ I+ VTDLGQ +HF+LLE  
Sbjct: 285  VFHEGF-SIPFMVQKSDGGYNYATTDLAAMRYRVEHDHAEKIIIVTDLGQSLHFQLLEAT 343

Query: 836  AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
            A  AG L+P       VGFG+VL  + KKFKTRSG+ +KL ELLD  + ++ + L   + 
Sbjct: 344  AIAAGYLHPG--MFSHVGFGLVLDAEGKKFKTRSGENIKLQELLDTAIEKAREAL--LSH 399

Query: 896  HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIA 955
              E+T TEL E    +    IKYADLS +R  DY+FSF+KML   GNTA++LLYAY RI 
Sbjct: 400  RPEVTETELEELAPIIGINAIKYADLSSHRVSDYIFSFEKMLRFDGNTAMFLLYAYVRIQ 459

Query: 956  SIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLY 1015
             I R   +    L     S P+SL+   E ALA +LLR  + L L  ++LC H L EYLY
Sbjct: 460  GIKRRLHLQELSL-----SGPLSLQDPAEEALALSLLRFPEALQLTIKELCPHFLTEYLY 514

Query: 1016 DISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             ++  F+ F+ +C+      EG    + + RL L   T KV+     +L +RT
Sbjct: 515  TLTQKFNRFFRDCHI-----EG--SPLESERLTLCALTEKVLATGMHLLGLRT 560



 Score =  266 bits (680), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 150/361 (41%), Positives = 219/361 (60%), Gaps = 21/361 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           S+   LS +   A+ +AFPE+      V  + ++    FG +QCNDAM L ++ K     
Sbjct: 3   SLLSELSVLCHQALSLAFPEVKGWEPEVTPSTKEL---FGHYQCNDAMKLARVLK----- 54

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
           + P  IA++I S +  +        +  D IE+A  GF+N   S  +  E++        
Sbjct: 55  QAPRSIAEAIVSHLPHK--------EFFDSIEIAGAGFINFTFSSKFLTERLNSFSSTLA 106

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
               +     +++DFSSPNIAK+MHVGHLRSTIIG+ ++R+L Y+G+ V+RLNH+GDWGT
Sbjct: 107 SGLRVEHPQNIVIDFSSPNIAKDMHVGHLRSTIIGECLARILSYVGNSVLRLNHIGDWGT 166

Query: 266 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 325
            FGMLIA +++  P+       + DL   YK + KRF E+E FKKRA Q VVALQ  +P 
Sbjct: 167 AFGMLIAFIEES-PEE-ANLDNLKDLTELYKRAHKRFAEEEAFKKRAQQRVVALQAQEPQ 224

Query: 326 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
               W+ IC++S + FQ+IYD L++TL +RGESFY   + +++  LE K L+ L D  K 
Sbjct: 225 ALALWKKICEISEKAFQQIYDILDITLEKRGESFYNPFLPEVIQDLESKHLITLSDKAKC 284

Query: 386 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-HRSYH-QVLQAI 443
           ++ E   SIP  + KSDGG+ Y T+DLAA+R R+E + A+ I+ VTD  +S H Q+L+A 
Sbjct: 285 VFHEGF-SIPFMVQKSDGGYNYATTDLAAMRYRVEHDHAEKIIIVTDLGQSLHFQLLEAT 343

Query: 444 A 444
           A
Sbjct: 344 A 344



 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/347 (41%), Positives = 210/347 (60%), Gaps = 19/347 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            S+   LS +   A+ +AFPE+      V  + ++    FG +QCNDAM L ++ K     
Sbjct: 3    SLLSELSVLCHQALSLAFPEVKGWEPEVTPSTKEL---FGHYQCNDAMKLARVLK----- 54

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
            + P  IA++I S +  +        +  D IE+A  GF+N   S  +  E++        
Sbjct: 55   QAPRSIAEAIVSHLPHK--------EFFDSIEIAGAGFINFTFSSKFLTERLNSFSSTLA 106

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
                +     +++DFSSPNIAK+MHVGHLRSTIIG+ ++R+L Y+G+ V+RLNH+GDWGT
Sbjct: 107  SGLRVEHPQNIVIDFSSPNIAKDMHVGHLRSTIIGECLARILSYVGNSVLRLNHIGDWGT 166

Query: 1283 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
             FGMLIA +++  P+       + DL   YK + KRF E+E FKKRA Q VVALQ  +P 
Sbjct: 167  AFGMLIAFIEES-PEE-ANLDNLKDLTELYKRAHKRFAEEEAFKKRAQQRVVALQAQEPQ 224

Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
                W+ IC++S + FQ+IYD L++TL +RGESFY   + +++  LE K L+ L D  K 
Sbjct: 225  ALALWKKICEISEKAFQQIYDILDITLEKRGESFYNPFLPEVIQDLESKHLITLSDKAKC 284

Query: 1403 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            ++ E   SIP  + KSDGG+ Y T+DLAA+R R+E + A+ I+ VTD
Sbjct: 285  VFHEGF-SIPFMVQKSDGGYNYATTDLAAMRYRVEHDHAEKIIIVTD 330


>gi|124024435|ref|YP_001018742.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166232822|sp|A2CDB7.1|SYR_PROM3 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|123964721|gb|ABM79477.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 603

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 248/624 (39%), Positives = 353/624 (56%), Gaps = 56/624 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH-----KFGDFQCNDAMALCKIF 529
            +S+   L      A+  AFPE         +  +  +      +FGDFQ N A+ L K  
Sbjct: 2    LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPL 61

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
            K            + IA+ +  +L  + +   +    ++A PGF+N+ +       +++ 
Sbjct: 62   KQP---------PRQIAAAIVDQLMVDTAFNAICLTPDIAGPGFINLTVRPECLAAEVQA 112

Query: 590  IIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLL 637
             +             N  Q PT      V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+L
Sbjct: 113  RLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVL 167

Query: 638  EYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDED 695
            E+ GH V+RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL  FY+++K+RFD+D
Sbjct: 168  EFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDD 227

Query: 696  EIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHME 755
            E F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL+V L ERGESFY  ++E
Sbjct: 228  EAFQTTSREEVVKLQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLE 287

Query: 756  QLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI- 809
             +V  L   GLL  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAA+R R  
Sbjct: 288  SVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFA 347

Query: 810  ---EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFK 866
               + + A  ++YVTD GQ  HF  + + A++AG + P+  R+  V FG+V GED KK K
Sbjct: 348  APPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWI-PDAGRLQHVPFGLVQGEDGKKLK 406

Query: 867  TRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHN 924
            TR+GDTV+L ELLDE + R+   L+ + +       E  + +    V    +KYADLS N
Sbjct: 407  TRAGDTVRLRELLDEAVERAESDLRRRLQEEGRDEDESFIEQVATTVGLAAVKYADLSQN 466

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  +Y FSFD+ML  +GNTA YLLYA  RIA IAR  G    DL V   +  +     +E
Sbjct: 467  RITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG----DLDVT--TAELQFSETQE 520

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
            +AL + LL+ + V+  V  +L  + LC YL+++S  F+ FYD    ++ +   +     +
Sbjct: 521  WALVRELLKFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYDQVPVLKAEQPSR-----S 575

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL L   TA  +K    +L I T
Sbjct: 576  CRLALCRLTADTLKLGLSLLGIPT 599



 Score =  270 bits (690), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 153/376 (40%), Positives = 216/376 (57%), Gaps = 42/376 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH-----KFGDFQCNDAMALCKIF 139
           +S+   L      A+  AFPE         +  +  +      +FGDFQ N A+ L K  
Sbjct: 2   LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPL 61

Query: 140 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 199
           K            + IA+ +  +L  + +   +    ++A PGF+N+ +       +++ 
Sbjct: 62  KQP---------PRQIAAAIVDQLMVDTAFNAICLTPDIAGPGFINLTVRPECLAAEVQA 112

Query: 200 IIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLL 247
            +             N  Q PT      V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+L
Sbjct: 113 RLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVL 167

Query: 248 EYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDED 305
           E+ GH V+RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL  FY+++K+RFD+D
Sbjct: 168 EFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDD 227

Query: 306 EIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHME 365
           E F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL+V L ERGESFY  ++E
Sbjct: 228 EAFQTTSREEVVKLQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLE 287

Query: 366 QLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI- 419
            +V  L   GLL  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAA+R R  
Sbjct: 288 SVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFA 347

Query: 420 ---EEEKADWIVYVTD 432
              + + A  ++YVTD
Sbjct: 348 APPQGDGARRVIYVTD 363



 Score =  270 bits (690), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 153/376 (40%), Positives = 216/376 (57%), Gaps = 42/376 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH-----KFGDFQCNDAMALCKIF 1156
            +S+   L      A+  AFPE         +  +  +      +FGDFQ N A+ L K  
Sbjct: 2    LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPL 61

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
            K            + IA+ +  +L  + +   +    ++A PGF+N+ +       +++ 
Sbjct: 62   KQP---------PRQIAAAIVDQLMVDTAFNAICLTPDIAGPGFINLTVRPECLAAEVQA 112

Query: 1217 IIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLL 1264
             +             N  Q PT      V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+L
Sbjct: 113  RLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVL 167

Query: 1265 EYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDED 1322
            E+ GH V+RLNHVGDWGTQFGMLI HL+   P+ L  +  +   DL  FY+++K+RFD+D
Sbjct: 168  EFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDD 227

Query: 1323 EIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHME 1382
            E F+  + + VV LQ  DP   KAW ++CD SRR+FQKIYDRL+V L ERGESFY  ++E
Sbjct: 228  EAFQTTSREEVVKLQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLE 287

Query: 1383 QLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI- 1436
             +V  L   GLL  DDG + ++     G+D   +P+ + KSDGGF Y T+DLAA+R R  
Sbjct: 288  SVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFA 347

Query: 1437 ---EEEKADWIVYVTD 1449
               + + A  ++YVTD
Sbjct: 348  APPQGDGARRVIYVTD 363


>gi|443310197|ref|ZP_21039858.1| arginyl-tRNA synthetase [Synechocystis sp. PCC 7509]
 gi|442779741|gb|ELR89973.1| arginyl-tRNA synthetase [Synechocystis sp. PCC 7509]
          Length = 584

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 251/603 (41%), Positives = 364/603 (60%), Gaps = 53/603 (8%)

Query: 485  FTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 539
            F  A+  AF   GD+ A      V ++N K    FGD+Q N A++L K        + P 
Sbjct: 12   FEQALSAAF---GDEYAKTDPLLVPASNPK----FGDYQSNVALSLAKRLG-----QQPR 59

Query: 540  DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK----DIIVNGV 595
             IA+ I   +        ++  + +  ++A  GF+N+ L   Y   ++K    D+ +  V
Sbjct: 60   KIAEQIIQKL--------NVVGICETPQLAGAGFINLTLLPSYLETELKSAYTDLRLGIV 111

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            +  T     RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNH+GDWGT
Sbjct: 112  KAKTPK---RVVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHNVLRLNHLGDWGT 168

Query: 656  QFGMLIAHLQ--DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            QFGMLI  L+  +   DY      + +L  FY+ESKKRFD+D  F++R+ Q VVALQ  D
Sbjct: 169  QFGMLITQLREAESVNDY--DLLDLGELVEFYRESKKRFDDDAEFRERSRQAVVALQSGD 226

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTL-TERGESFYQKHMEQLVPYLEKKGLLELDDG 772
               K AW+ +C+ SR +F+ IY  L+V    ERGESFY   + Q+V  L+K GLL  + G
Sbjct: 227  EKAKIAWKFLCNKSRIEFEIIYALLDVHFDEERGESFYNPFLVQVVEDLDKAGLLVENQG 286

Query: 773  RKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
             K ++       +   +P+ + KSDGG+ Y T+DLAA+R RIE++KA+ ++YVTD GQ  
Sbjct: 287  AKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAAVRYRIEQDKANRLIYVTDAGQAN 346

Query: 828  HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
            HF  + + A++A +  P    +D V FG+V GED KK KTRSG+TVKL +LLDE + R+ 
Sbjct: 347  HFAQVFQVARRA-LWIPESIEIDHVPFGLVQGEDGKKLKTRSGETVKLKDLLDEAIVRAR 405

Query: 888  DKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
              L+++ +  +   TE  ++ A   +    +KYADLS NR  +YVFS+D+MLD +GNTA 
Sbjct: 406  ADLENRLKAEDRQETEEFVANAASVIGISSVKYADLSQNRTSNYVFSYDRMLDRQGNTAP 465

Query: 946  YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
            Y+LYAY R   I+R   I+ E L     S  + L+HE E  LAK LL++++V+  V +DL
Sbjct: 466  YMLYAYVRTQGISRRGEIDFEQL---GNSVDILLQHETELILAKHLLQLDEVVNAVEQDL 522

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILN 1065
              + LCEYL+ +S  F++FYD    +  +     + + T RL+L   TA+ +K    +L 
Sbjct: 523  FPNRLCEYLFQLSQKFNQFYDKVPVLNAE-----EPLRTSRLVLCNLTARTLKLGLSLLG 577

Query: 1066 IRT 1068
            I+ 
Sbjct: 578  IQV 580



 Score =  249 bits (636), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 155/367 (42%), Positives = 220/367 (59%), Gaps = 45/367 (12%)

Query: 95  FTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 149
           F  A+  AF   GD+ A      V ++N K    FGD+Q N A++L K        + P 
Sbjct: 12  FEQALSAAF---GDEYAKTDPLLVPASNPK----FGDYQSNVALSLAKRLG-----QQPR 59

Query: 150 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK----DIIVNGV 205
            IA+ I   +        ++  + +  ++A  GF+N+ L   Y   ++K    D+ +  V
Sbjct: 60  KIAEQIIQKL--------NVVGICETPQLAGAGFINLTLLPSYLETELKSAYTDLRLGIV 111

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
           +  T     RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNH+GDWGT
Sbjct: 112 KAKTPK---RVVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHNVLRLNHLGDWGT 168

Query: 266 QFGMLIAHLQ--DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           QFGMLI  L+  +   DY      + +L  FY+ESKKRFD+D  F++R+ Q VVALQ  D
Sbjct: 169 QFGMLITQLREAESVNDY--DLLDLGELVEFYRESKKRFDDDAEFRERSRQAVVALQSGD 226

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTL-TERGESFYQKHMEQLVPYLEKKGLLELDDG 382
              K AW+ +C+ SR +F+ IY  L+V    ERGESFY   + Q+V  L+K GLL  + G
Sbjct: 227 EKAKIAWKFLCNKSRIEFEIIYALLDVHFDEERGESFYNPFLVQVVEDLDKAGLLVENQG 286

Query: 383 RKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HR 434
            K ++       +   +P+ + KSDGG+ Y T+DLAA+R RIE++KA+ ++YVTD     
Sbjct: 287 AKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAAVRYRIEQDKANRLIYVTDAGQAN 346

Query: 435 SYHQVLQ 441
            + QV Q
Sbjct: 347 HFAQVFQ 353



 Score =  249 bits (636), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 155/367 (42%), Positives = 220/367 (59%), Gaps = 45/367 (12%)

Query: 1112 FTHAVQVAFPELGDKTAS-----VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 1166
            F  A+  AF   GD+ A      V ++N K    FGD+Q N A++L K        + P 
Sbjct: 12   FEQALSAAF---GDEYAKTDPLLVPASNPK----FGDYQSNVALSLAKRLG-----QQPR 59

Query: 1167 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK----DIIVNGV 1222
             IA+ I   +        ++  + +  ++A  GF+N+ L   Y   ++K    D+ +  V
Sbjct: 60   KIAEQIIQKL--------NVVGICETPQLAGAGFINLTLLPSYLETELKSAYTDLRLGIV 111

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            +  T     RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNH+GDWGT
Sbjct: 112  KAKTPK---RVVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHNVLRLNHLGDWGT 168

Query: 1283 QFGMLIAHLQ--DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            QFGMLI  L+  +   DY      + +L  FY+ESKKRFD+D  F++R+ Q VVALQ  D
Sbjct: 169  QFGMLITQLREAESVNDY--DLLDLGELVEFYRESKKRFDDDAEFRERSRQAVVALQSGD 226

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTL-TERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
               K AW+ +C+ SR +F+ IY  L+V    ERGESFY   + Q+V  L+K GLL  + G
Sbjct: 227  EKAKIAWKFLCNKSRIEFEIIYALLDVHFDEERGESFYNPFLVQVVEDLDKAGLLVENQG 286

Query: 1400 RKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HR 1451
             K ++       +   +P+ + KSDGG+ Y T+DLAA+R RIE++KA+ ++YVTD     
Sbjct: 287  AKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAAVRYRIEQDKANRLIYVTDAGQAN 346

Query: 1452 SYHQVLQ 1458
             + QV Q
Sbjct: 347  HFAQVFQ 353


>gi|254526915|ref|ZP_05138967.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538339|gb|EEE40792.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 604

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 246/581 (42%), Positives = 351/581 (60%), Gaps = 47/581 (8%)

Query: 512  HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
             +FGD+QCN  ++L KI+K     KNP DI+    ++    L  N S++K+   +E+A P
Sbjct: 43   EEFGDYQCNVCLSLSKIYK-----KNPRDISNDFINL----LNKNKSISKLCKSLEIAGP 93

Query: 572  GFVNVFLSRVYAGEQIK-DIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 624
            GF+N+ L       +IK +I  N      + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDAVLINEIKSNIQCNRAGITLIRKDLDSGFSNKVIVDFSSPNIAKEMHVGHL 153

Query: 625  RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 682
            RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 683  AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
             FYKESKKRFD +  F+KR+ + VV LQR D    KAW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKESKKRFDNESEFQKRSREEVVKLQRGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 743  TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 797
             ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274  EERGESFYNPFLKSVIDDLNLKKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 798  DTSDLAAIRQRIEE----EKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
             T+DLAAIR R  +    + A  I+YVTD GQ  HF  + + AKKA  + P   ++D V 
Sbjct: 334  ATTDLAAIRYRFNKPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWI-PENRQVDHVP 392

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQ 909
            FG+V G D KK KTR G+T++L +LL+E +RR+    L +LKD+ R+   T   ++   +
Sbjct: 393  FGLVQGIDGKKLKTREGETIRLKDLLNEAVRRAKEDLLKRLKDEERYE--TEEFIANTSR 450

Query: 910  AVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGI--NSED 967
             +  G +KYADLS NR  +Y FSFDKML   GNTA YLLY   RI  I R      +S+D
Sbjct: 451  IIGLGAVKYADLSQNRITNYQFSFDKMLSLNGNTAPYLLYTLVRILGIKRKNDFVYDSKD 510

Query: 968  LRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDN 1027
             +       V+ EH+ E+ L + LL+ ++V++ + +DL  + LC YL+++   F+ FYD 
Sbjct: 511  FQY------VNYEHKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYDQ 564

Query: 1028 CYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               ++++     K +   RL L + TAK +K   ++L I T
Sbjct: 565  VPILKEE-----KYIKISRLNLCDLTAKTLKLSLELLGIET 600



 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 207/330 (62%), Gaps = 27/330 (8%)

Query: 122 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
            +FGD+QCN  ++L KI+K     KNP DI+    ++    L  N S++K+   +E+A P
Sbjct: 43  EEFGDYQCNVCLSLSKIYK-----KNPRDISNDFINL----LNKNKSISKLCKSLEIAGP 93

Query: 182 GFVNVFLSRVYAGEQIK-DIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 234
           GF+N+ L       +IK +I  N      + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94  GFINIKLKDAVLINEIKSNIQCNRAGITLIRKDLDSGFSNKVIVDFSSPNIAKEMHVGHL 153

Query: 235 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 292
           RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154 RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FYKESKKRFD +  F+KR+ + VV LQR D    KAW+++CD SR++F +IY  L + +
Sbjct: 214 EFYKESKKRFDNESEFQKRSREEVVKLQRGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 407
            ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274 EERGESFYNPFLKSVIDDLNLKKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 408 DTSDLAAIRQRIEE----EKADWIVYVTDH 433
            T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334 ATTDLAAIRYRFNKPPNGDDASRIIYVTDH 363



 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 207/330 (62%), Gaps = 27/330 (8%)

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             +FGD+QCN  ++L KI+K     KNP DI+    ++    L  N S++K+   +E+A P
Sbjct: 43   EEFGDYQCNVCLSLSKIYK-----KNPRDISNDFINL----LNKNKSISKLCKSLEIAGP 93

Query: 1199 GFVNVFLSRVYAGEQIK-DIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 1251
            GF+N+ L       +IK +I  N      + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDAVLINEIKSNIQCNRAGITLIRKDLDSGFSNKVIVDFSSPNIAKEMHVGHL 153

Query: 1252 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 1309
            RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FYKESKKRFD +  F+KR+ + VV LQR D    KAW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKESKKRFDNESEFQKRSREEVVKLQRGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 1424
             ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274  EERGESFYNPFLKSVIDDLNLKKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 1425 DTSDLAAIRQRIEE----EKADWIVYVTDH 1450
             T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334  ATTDLAAIRYRFNKPPNGDDASRIIYVTDH 363


>gi|126291425|ref|XP_001380293.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Monodelphis
            domestica]
          Length = 358

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/345 (59%), Positives = 265/345 (76%), Gaps = 5/345 (1%)

Query: 724  CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 783
            CD    +FQKIYD L+++L ERGESFYQ  M  +V   E+KG +++DDGRKI++  +  S
Sbjct: 13   CD---SEFQKIYDALDISLIERGESFYQDRMTDIVKEFEEKGFVQVDDGRKIVFVPE-SS 68

Query: 784  IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILN 843
            +P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ VHF+ +   A+  G  +
Sbjct: 69   VPLTIVKSDGGYTYDTSDLAAIKQRLMEEKADIIIYVVDSGQAVHFQAIFVAAQMIGWYD 128

Query: 844  PNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE 903
            P  TR+   GFGVVLGED+KKFKTRSGDTV+L +LL+EGL+RS+DKLK+K R   LTP E
Sbjct: 129  PKVTRVSHAGFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVLTPEE 188

Query: 904  LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGI 963
            L  AQ +VA+GCI+YADLSHNR  DY+FSFDKMLDDRGNTA YLLYA+TRI SIAR A I
Sbjct: 189  LKAAQTSVAFGCIRYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANI 248

Query: 964  NSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSE 1023
            + E L+ AA+ T + L+HEKE+ L + +LR  ++L  +  DL LH LC+Y+Y+++T F+E
Sbjct: 249  DEEMLQKAAKETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTE 308

Query: 1024 FYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            FYD+CYC+EKD + GKI  V+  R+LL EATA +M K FDIL I+
Sbjct: 309  FYDSCYCVEKDRQTGKILKVNMWRMLLCEATAAIMAKGFDILGIK 353



 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 78/99 (78%), Gaps = 4/99 (4%)

Query: 334 CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 393
           CD    +FQKIYD L+++L ERGESFYQ  M  +V   E+KG +++DDGRKI++  +  S
Sbjct: 13  CD---SEFQKIYDALDISLIERGESFYQDRMTDIVKEFEEKGFVQVDDGRKIVFVPE-SS 68

Query: 394 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 69  VPLTIVKSDGGYTYDTSDLAAIKQRLMEEKADIIIYVVD 107



 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 78/99 (78%), Gaps = 4/99 (4%)

Query: 1351 CDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS 1410
            CD    +FQKIYD L+++L ERGESFYQ  M  +V   E+KG +++DDGRKI++  +  S
Sbjct: 13   CD---SEFQKIYDALDISLIERGESFYQDRMTDIVKEFEEKGFVQVDDGRKIVFVPE-SS 68

Query: 1411 IPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D
Sbjct: 69   VPLTIVKSDGGYTYDTSDLAAIKQRLMEEKADIIIYVVD 107


>gi|156084636|ref|XP_001609801.1| arginyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154797053|gb|EDO06233.1| arginyl-tRNA synthetase, putative [Babesia bovis]
          Length = 581

 Score =  418 bits (1075), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/564 (42%), Positives = 335/564 (59%), Gaps = 32/564 (5%)

Query: 502  SVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAK 561
            SV S N K    FGDFQ NDA++L K      +  +P ++A+ + S ++S          
Sbjct: 33   SVVSANPK----FGDFQWNDAISLYKAIGSTLQVGSPKELAELVKSHISSS--------- 79

Query: 562  VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
                + V+  GF+ V LS+ +   +I+ +  +GV  P   K  RV VDFSSPNIAKEMHV
Sbjct: 80   TFSAVNVSPQGFLTVTLSKEFIEGEIRHLYKHGVSVPQAPKGFRVAVDFSSPNIAKEMHV 139

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADL 681
            GHLRSTIIG+++SR+LE+ G+DV+R+NH+GDWGT FGML+ ++  K PD++T  P I+D 
Sbjct: 140  GHLRSTIIGESLSRILEFHGYDVLRINHLGDWGTHFGMLVEYMLAKHPDFMTNVPSISDF 199

Query: 682  QAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT 741
              FYKE+K   D D  FK R+ + VV LQ  D      W+++C +S R+F KIY  L++T
Sbjct: 200  TQFYKEAKALMDADAEFKARSRKRVVLLQSGDELSINVWKLLCQISEREFAKIYKMLDIT 259

Query: 742  LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSD 801
            +   GESFY   +  +V  L++K L+   +G + ++     S+P+  +KSDG + YD++D
Sbjct: 260  IENCGESFYNDMIPDVVNELKEKDLVVESEGAQCVF-TSVSSVPLMAIKSDGSYGYDSTD 318

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGI--LNPNKTRMDFVGFGVVLG 859
            LA IR RI+   + W++YVTD+GQ  HF  + E A+ AG   ++    R+D +GFG+V  
Sbjct: 319  LACIRYRIKTLGSKWLIYVTDVGQQEHFMKVFETARLAGWSKVDGQDIRIDHLGFGMVQD 378

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR-HTELTPTEL----SEAQQAVAYG 914
                KFKTRSGDTVKL  LLDE + R+  +L+ + +   E   TE+     E  + + YG
Sbjct: 379  SSGNKFKTRSGDTVKLITLLDEAVSRATVELESRIKARQEEGETEIDINVPEVAKVLGYG 438

Query: 915  CIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQS 974
             +KY +L  N   +Y FSFD MLD RGNTA+YLLYAY RI  I   AGI+ E L    Q 
Sbjct: 439  AVKYFELRQNIANNYKFSFDHMLDPRGNTAIYLLYAYARICQIFHKAGIDPETL----QP 494

Query: 975  TPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKD 1034
              + L H  E +LAK +L++  VL  +T D  +  L +++Y +S  FS FY  C  I   
Sbjct: 495  ELLDLVHPLEISLAKHILKLPAVLHQITADFLISKLADFVYALSVEFSSFYKQCKVIGDP 554

Query: 1035 AEGKIKTVHTGRLLLAEATAKVMK 1058
             E   KT    RLLL  AT  VMK
Sbjct: 555  NE---KT----RLLLCHATKTVMK 571



 Score =  266 bits (679), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 200/321 (62%), Gaps = 14/321 (4%)

Query: 112 SVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAK 171
           SV S N K    FGDFQ NDA++L K      +  +P ++A+ + S ++S          
Sbjct: 33  SVVSANPK----FGDFQWNDAISLYKAIGSTLQVGSPKELAELVKSHISSS--------- 79

Query: 172 VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
               + V+  GF+ V LS+ +   +I+ +  +GV  P   K  RV VDFSSPNIAKEMHV
Sbjct: 80  TFSAVNVSPQGFLTVTLSKEFIEGEIRHLYKHGVSVPQAPKGFRVAVDFSSPNIAKEMHV 139

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADL 291
           GHLRSTIIG+++SR+LE+ G+DV+R+NH+GDWGT FGML+ ++  K PD++T  P I+D 
Sbjct: 140 GHLRSTIIGESLSRILEFHGYDVLRINHLGDWGTHFGMLVEYMLAKHPDFMTNVPSISDF 199

Query: 292 QAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT 351
             FYKE+K   D D  FK R+ + VV LQ  D      W+++C +S R+F KIY  L++T
Sbjct: 200 TQFYKEAKALMDADAEFKARSRKRVVLLQSGDELSINVWKLLCQISEREFAKIYKMLDIT 259

Query: 352 LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSD 411
           +   GESFY   +  +V  L++K L+   +G + ++     S+P+  +KSDG + YD++D
Sbjct: 260 IENCGESFYNDMIPDVVNELKEKDLVVESEGAQCVF-TSVSSVPLMAIKSDGSYGYDSTD 318

Query: 412 LAAIRQRIEEEKADWIVYVTD 432
           LA IR RI+   + W++YVTD
Sbjct: 319 LACIRYRIKTLGSKWLIYVTD 339



 Score =  266 bits (679), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 200/321 (62%), Gaps = 14/321 (4%)

Query: 1129 SVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAK 1188
            SV S N K    FGDFQ NDA++L K      +  +P ++A+ + S ++S          
Sbjct: 33   SVVSANPK----FGDFQWNDAISLYKAIGSTLQVGSPKELAELVKSHISSS--------- 79

Query: 1189 VIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
                + V+  GF+ V LS+ +   +I+ +  +GV  P   K  RV VDFSSPNIAKEMHV
Sbjct: 80   TFSAVNVSPQGFLTVTLSKEFIEGEIRHLYKHGVSVPQAPKGFRVAVDFSSPNIAKEMHV 139

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADL 1308
            GHLRSTIIG+++SR+LE+ G+DV+R+NH+GDWGT FGML+ ++  K PD++T  P I+D 
Sbjct: 140  GHLRSTIIGESLSRILEFHGYDVLRINHLGDWGTHFGMLVEYMLAKHPDFMTNVPSISDF 199

Query: 1309 QAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT 1368
              FYKE+K   D D  FK R+ + VV LQ  D      W+++C +S R+F KIY  L++T
Sbjct: 200  TQFYKEAKALMDADAEFKARSRKRVVLLQSGDELSINVWKLLCQISEREFAKIYKMLDIT 259

Query: 1369 LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSD 1428
            +   GESFY   +  +V  L++K L+   +G + ++     S+P+  +KSDG + YD++D
Sbjct: 260  IENCGESFYNDMIPDVVNELKEKDLVVESEGAQCVF-TSVSSVPLMAIKSDGSYGYDSTD 318

Query: 1429 LAAIRQRIEEEKADWIVYVTD 1449
            LA IR RI+   + W++YVTD
Sbjct: 319  LACIRYRIKTLGSKWLIYVTD 339


>gi|124024975|ref|YP_001014091.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166232821|sp|A2C016.1|SYR_PROM1 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|123960043|gb|ABM74826.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 607

 Score =  418 bits (1075), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 250/625 (40%), Positives = 369/625 (59%), Gaps = 54/625 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 529
            + +   L +    A    FP+     KT+S+ + +        +FGDFQ N A++L K  
Sbjct: 2    LEISARLEEALNRAFTKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVY- 582
                  + P DIAQ IA     +L  +    ++ +   +A PGF+N+       +S ++ 
Sbjct: 62   N-----RPPRDIAQQIAK----QLQQDNDFVRICNPPLIAGPGFINLSINSKTLISEIHF 112

Query: 583  ------AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 636
                   G  +K    + ++    N   RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113  RLNDKRLGVPLKKFNTDKIEEEKSNN--RVIIDFSSPNIAKEMHVGHLRSTIIGDSLARV 170

Query: 637  LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 694
            LE+ G++V+RLNHVGDWGTQFGMLI HL++  P+ L TK    I+DL  FY+++KKRFDE
Sbjct: 171  LEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 754
            D+IF+ ++   VV LQ  D +   AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231  DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290

Query: 755  EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 809
              ++  L+ K LL  D G + ++     G+D    P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291  VDVINDLKNKKLLINDQGAQCIFLDGLVGKDGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350

Query: 810  ----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
                  + A  ++YVTD GQ  HF  + + AK A  + P   +++ V FG+V GED KK 
Sbjct: 351  TIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANWI-PTDCQIEHVPFGLVQGEDGKKL 409

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSH 923
            KTRSG+T++L +LLDE ++R+ D LK++      +  E  + +    V    IKYADLS 
Sbjct: 410  KTRSGETIRLVDLLDEAIQRARDDLKNRLNTESRSENENFIDKVSTTVGIASIKYADLSQ 469

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  +Y FSFDKML  +GNTA YLLYA  RIA I+R  G    DL V++Q+  +     +
Sbjct: 470  NRISNYQFSFDKMLSLQGNTAPYLLYALVRIAGISRKGG----DLNVSSQN--IQFNESQ 523

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E+ L + LL+++ ++  V ++L  + LC YL+++S  F+ FYD    ++     +     
Sbjct: 524  EWDLIRKLLQLDSIIAEVEKELLPNRLCGYLFELSQTFNRFYDQVPILKASEPSR----- 578

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL+L   TA  +K    +L I T
Sbjct: 579  ASRLVLCSITADTLKLGMSLLGIPT 603



 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 156/377 (41%), Positives = 228/377 (60%), Gaps = 40/377 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 139
           + +   L +    A    FP+     KT+S+ + +        +FGDFQ N A++L K  
Sbjct: 2   LEISARLEEALNRAFTKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61

Query: 140 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVY- 192
                 + P DIAQ IA     +L  +    ++ +   +A PGF+N+       +S ++ 
Sbjct: 62  N-----RPPRDIAQQIAK----QLQQDNDFVRICNPPLIAGPGFINLSINSKTLISEIHF 112

Query: 193 ------AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 246
                  G  +K    + ++    N   RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113 RLNDKRLGVPLKKFNTDKIEEEKSNN--RVIIDFSSPNIAKEMHVGHLRSTIIGDSLARV 170

Query: 247 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 304
           LE+ G++V+RLNHVGDWGTQFGMLI HL++  P+ L TK    I+DL  FY+++KKRFDE
Sbjct: 171 LEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 364
           D+IF+ ++   VV LQ  D +   AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231 DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290

Query: 365 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 419
             ++  L+ K LL  D G + ++     G+D    P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291 VDVINDLKNKKLLINDQGAQCIFLDGLVGKDGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350

Query: 420 ----EEEKADWIVYVTD 432
                 + A  ++YVTD
Sbjct: 351 TIPPHGDGACRLIYVTD 367



 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 156/377 (41%), Positives = 228/377 (60%), Gaps = 40/377 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 1156
            + +   L +    A    FP+     KT+S+ + +        +FGDFQ N A++L K  
Sbjct: 2    LEISARLEEALNRAFTKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVY- 1209
                  + P DIAQ IA     +L  +    ++ +   +A PGF+N+       +S ++ 
Sbjct: 62   N-----RPPRDIAQQIAK----QLQQDNDFVRICNPPLIAGPGFINLSINSKTLISEIHF 112

Query: 1210 ------AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 1263
                   G  +K    + ++    N   RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113  RLNDKRLGVPLKKFNTDKIEEEKSNN--RVIIDFSSPNIAKEMHVGHLRSTIIGDSLARV 170

Query: 1264 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 1321
            LE+ G++V+RLNHVGDWGTQFGMLI HL++  P+ L TK    I+DL  FY+++KKRFDE
Sbjct: 171  LEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 1381
            D+IF+ ++   VV LQ  D +   AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231  DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290

Query: 1382 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 1436
              ++  L+ K LL  D G + ++     G+D    P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291  VDVINDLKNKKLLINDQGAQCIFLDGLVGKDGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350

Query: 1437 ----EEEKADWIVYVTD 1449
                  + A  ++YVTD
Sbjct: 351  TIPPHGDGACRLIYVTD 367


>gi|123967742|ref|YP_001008600.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123197852|gb|ABM69493.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 604

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/581 (41%), Positives = 349/581 (60%), Gaps = 47/581 (8%)

Query: 512  HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
             +FGD+QCN  ++L KI+K     KNP DI+    ++    L  N  ++K+   +E+A P
Sbjct: 43   EEFGDYQCNVCLSLSKIYK-----KNPRDISNDFINL----LNKNKRISKLCKSLEIAGP 93

Query: 572  GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 624
            GF+N+ L   V   E   +I  N    P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDEVLINEIKSNIQCNRAGIPLIRKDLESGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 625  RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 682
            RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 683  AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
             FYKESKKRFD +  F+KR+ + VV LQ  D    KAW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKESKKRFDNESEFQKRSREEVVKLQSGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 743  TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 797
             ERGESFY   ++ ++  L  + +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274  EERGESFYNPFLKSVIDDLNLEKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 798  DTSDLAAIRQRIEE----EKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
             T+DLAAIR R  +    + A  I+YVTD GQ  HF  + + AKKA  + P   ++D V 
Sbjct: 334  ATTDLAAIRYRFNKPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWI-PENCQVDHVP 392

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQ 909
            FG+V G D KK KTR G T++L +LL+E +RR+    L +L+D++R+   T   ++   +
Sbjct: 393  FGLVQGIDGKKLKTREGKTIRLKDLLNEAVRRAKEDLLKRLEDEDRYE--TEEFIANTSR 450

Query: 910  AVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGI--NSED 967
             +  G +KYADLS NR  +Y FSFDKML   GNTA YLLY   RI  I R      +S+D
Sbjct: 451  IIGLGAVKYADLSQNRITNYQFSFDKMLSLNGNTAPYLLYTLVRILGIKRKNNFVYDSKD 510

Query: 968  LRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDN 1027
             +       V+ EH+ E+ L + LL+ ++V++ + +DL  + LC YL+++   F+ FYD 
Sbjct: 511  FQY------VNYEHKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYDQ 564

Query: 1028 CYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               ++++     K +   RL L + TAK +K   +IL I T
Sbjct: 565  VPILKEE-----KNIKISRLNLCDLTAKTLKLSLEILGIET 600



 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 205/330 (62%), Gaps = 27/330 (8%)

Query: 122 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
            +FGD+QCN  ++L KI+K     KNP DI+    ++    L  N  ++K+   +E+A P
Sbjct: 43  EEFGDYQCNVCLSLSKIYK-----KNPRDISNDFINL----LNKNKRISKLCKSLEIAGP 93

Query: 182 GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 234
           GF+N+ L   V   E   +I  N    P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94  GFINIKLKDEVLINEIKSNIQCNRAGIPLIRKDLESGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 235 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 292
           RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154 RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FYKESKKRFD +  F+KR+ + VV LQ  D    KAW+++CD SR++F +IY  L + +
Sbjct: 214 EFYKESKKRFDNESEFQKRSREEVVKLQSGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 407
            ERGESFY   ++ ++  L  + +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274 EERGESFYNPFLKSVIDDLNLEKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 408 DTSDLAAIRQRIEE----EKADWIVYVTDH 433
            T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334 ATTDLAAIRYRFNKPPNGDDASRIIYVTDH 363



 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 205/330 (62%), Gaps = 27/330 (8%)

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             +FGD+QCN  ++L KI+K     KNP DI+    ++    L  N  ++K+   +E+A P
Sbjct: 43   EEFGDYQCNVCLSLSKIYK-----KNPRDISNDFINL----LNKNKRISKLCKSLEIAGP 93

Query: 1199 GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 1251
            GF+N+ L   V   E   +I  N    P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDEVLINEIKSNIQCNRAGIPLIRKDLESGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 1252 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 1309
            RSTIIGD+ISR+ E  G++V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FYKESKKRFD +  F+KR+ + VV LQ  D    KAW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKESKKRFDNESEFQKRSREEVVKLQSGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 1424
             ERGESFY   ++ ++  L  + +L  D G K      M  ++   +P+ I K DGGF Y
Sbjct: 274  EERGESFYNPFLKSVIDDLNLEKILVEDQGAKCVFLDGMTNKEGKPLPLIIQKKDGGFNY 333

Query: 1425 DTSDLAAIRQRIEE----EKADWIVYVTDH 1450
             T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334  ATTDLAAIRYRFNKPPNGDDASRIIYVTDH 363


>gi|407789729|ref|ZP_11136828.1| arginyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
 gi|407205936|gb|EKE75899.1| arginyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
          Length = 578

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/565 (42%), Positives = 336/565 (59%), Gaps = 34/565 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K        +NP + AQ        +L  N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGVMGAAKRMG-----QNPREFAQ--------KLLDNLELDGIADKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  EQ +  + +     +      V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKPQWLAEQAEKALADAALAVSKPAAQTVVVDYSSPNLAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKR 691
            + R LE+LGH VVR NHVGDWGTQFGML+A+L+ +  +  +++   ++DL+ FY+ +K  
Sbjct: 142  VVRTLEFLGHKVVRQNHVGDWGTQFGMLLAYLEKQKAEGKSQAEMGLSDLEVFYRAAKGC 201

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDEDE F  RA + VV LQ  D    K W    D+S     ++Y +LNV+LT +   GES
Sbjct: 202  FDEDEAFANRARELVVQLQGGDQACLKMWREFNDISLAHCHEVYHKLNVSLTRQDVMGES 261

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 803
             Y   + Q+V  LE KGLL  D G K ++      +D   +P+ I K+ GG+ Y T+DLA
Sbjct: 262  AYNADLAQVVSDLEAKGLLVEDQGAKCVFLDEFKNKDGSILPIIIQKAGGGYLYATTDLA 321

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
            A+R R    KAD  +Y  D  Q +HF+ +   A KAG +  +   ++ +GFG + GED K
Sbjct: 322  AMRYRNNVLKADRALYFVDQRQALHFKQVFTLAHKAGFVR-DALSLEHMGFGTMNGEDGK 380

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSG TVKL +LL E   ++   +K++N  ++    EL E   AV  G +KYADLS 
Sbjct: 381  PFKTRSGGTVKLIDLLVEAEDKAYQLVKERN--SDFDEAELREIAHAVGIGAVKYADLSK 438

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            +R+ DY+FSFD ML   GNTA Y+LYAYTR+ASI R AGI++  L     S P+ L   +
Sbjct: 439  HRSSDYIFSFDAMLSFEGNTAPYMLYAYTRVASIFRKAGIDAASL-----SAPLLLAEPQ 493

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E ALA+ LL+  + +  V R+   H+LC YL++++  FS FY+ C  +  + EG    V 
Sbjct: 494  EKALAQKLLQFEETIESVVREGAPHYLCLYLFELAGLFSGFYEACPILSSEDEG----VK 549

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL LA  TA+ +K+  D+L I+T
Sbjct: 550  GSRLKLAHLTARTLKQGLDLLGIKT 574



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 188/321 (58%), Gaps = 22/321 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K        +NP + AQ        +L  N  L  + DK+E+A PG
Sbjct: 35  EFGDYQANGVMGAAKRMG-----QNPREFAQ--------KLLDNLELDGIADKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  EQ +  + +     +      V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLKPQWLAEQAEKALADAALAVSKPAAQTVVVDYSSPNLAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKR 301
           + R LE+LGH VVR NHVGDWGTQFGML+A+L+ +  +  +++   ++DL+ FY+ +K  
Sbjct: 142 VVRTLEFLGHKVVRQNHVGDWGTQFGMLLAYLEKQKAEGKSQAEMGLSDLEVFYRAAKGC 201

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDEDE F  RA + VV LQ  D    K W    D+S     ++Y +LNV+LT +   GES
Sbjct: 202 FDEDEAFANRARELVVQLQGGDQACLKMWREFNDISLAHCHEVYHKLNVSLTRQDVMGES 261

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 413
            Y   + Q+V  LE KGLL  D G K ++      +D   +P+ I K+ GG+ Y T+DLA
Sbjct: 262 AYNADLAQVVSDLEAKGLLVEDQGAKCVFLDEFKNKDGSILPIIIQKAGGGYLYATTDLA 321

Query: 414 AIRQRIEEEKADWIVYVTDHR 434
           A+R R    KAD  +Y  D R
Sbjct: 322 AMRYRNNVLKADRALYFVDQR 342



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 188/321 (58%), Gaps = 22/321 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K        +NP + AQ        +L  N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGVMGAAKRMG-----QNPREFAQ--------KLLDNLELDGIADKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  EQ +  + +     +      V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKPQWLAEQAEKALADAALAVSKPAAQTVVVDYSSPNLAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKR 1318
            + R LE+LGH VVR NHVGDWGTQFGML+A+L+ +  +  +++   ++DL+ FY+ +K  
Sbjct: 142  VVRTLEFLGHKVVRQNHVGDWGTQFGMLLAYLEKQKAEGKSQAEMGLSDLEVFYRAAKGC 201

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDEDE F  RA + VV LQ  D    K W    D+S     ++Y +LNV+LT +   GES
Sbjct: 202  FDEDEAFANRARELVVQLQGGDQACLKMWREFNDISLAHCHEVYHKLNVSLTRQDVMGES 261

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
             Y   + Q+V  LE KGLL  D G K ++      +D   +P+ I K+ GG+ Y T+DLA
Sbjct: 262  AYNADLAQVVSDLEAKGLLVEDQGAKCVFLDEFKNKDGSILPIIIQKAGGGYLYATTDLA 321

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
            A+R R    KAD  +Y  D R
Sbjct: 322  AMRYRNNVLKADRALYFVDQR 342


>gi|332289781|ref|YP_004420633.1| arginyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432677|gb|AEC17736.1| arginyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 575

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/602 (39%), Positives = 349/602 (57%), Gaps = 39/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+    A+  A    G    S A        +FGD+Q N  MA  K       
Sbjct: 1    MNIQTILSEKIKQAMIAA----GADQQSEALVRPSSKAQFGDYQANGVMAAAKKLA---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P D+AQ +          N  L ++I+K+E+A PGF+N+FL+  +   Q   ++ + 
Sbjct: 53   -MPPRDLAQKVVE--------NLDLGEMIEKVEIAGPGFINIFLNPAWLATQTNKMLADH 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                   K   ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE++GH+V+R NHVGDWG
Sbjct: 104  HFLIAPVKAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFVGHNVIRANHVGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DEDE+F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNENASDMELSDLEAFYREAKKHYDEDEVFAEKARGYVVKLQGGDE 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
              +K W  + D++ +  Q+ YDRLNVTLT++   GES Y   +  +V  LE KGL   DD
Sbjct: 223  YCRKMWRKLVDITMKQNQRNYDRLNVTLTDKDVMGESLYNPMLPGIVADLEAKGLAVKDD 282

Query: 772  GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G  +++      ++   + + I K DGG+ Y T+D+A  + R E   AD I+Y TD  Q 
Sbjct: 283  GAVVVFLNEFKNKEGDPLGVIIQKKDGGYLYATTDIACAKYRYETLHADRILYFTDSRQS 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H + +    +KAG + P     D   FG++LG+D K FKTR+G TVKL++LLDE + R+
Sbjct: 343  QHLQQVWLIVRKAGYV-PESVTWDHFNFGMMLGKDNKPFKTRTGGTVKLADLLDEAVERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               + +K+  T L+  E  +  + V  G +KYADLS NR  DYVF +D ML   GNTA Y
Sbjct: 402  EKLISEKS--TNLSAEEQHQVAEVVGIGAVKYADLSKNRTTDYVFDWDNMLTFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTRI SI   +GI+ + L     +  + ++ +KE  LA TLL+  + +  V ++  
Sbjct: 460  IQYAYTRIRSIFANSGIDPQQL-----AGEIQIKDDKERQLALTLLKFEEAINTVVKEGT 514

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLYD++ AFS FY++C  + +  E     V   RL LA  TAKV+K+  D+L I
Sbjct: 515  PHVLCAYLYDLAGAFSSFYEHCPILNQAEE-----VKQSRLKLAALTAKVLKQGLDLLGI 569

Query: 1067 RT 1068
            +T
Sbjct: 570  KT 571



 Score =  253 bits (646), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 158/439 (35%), Positives = 238/439 (54%), Gaps = 31/439 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+    A+  A    G    S A        +FGD+Q N  MA  K       
Sbjct: 1   MNIQTILSEKIKQAMIAA----GADQQSEALVRPSSKAQFGDYQANGVMAAAKKLA---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P D+AQ +          N  L ++I+K+E+A PGF+N+FL+  +   Q   ++ + 
Sbjct: 53  -MPPRDLAQKVVE--------NLDLGEMIEKVEIAGPGFINIFLNPAWLATQTNKMLADH 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                  K   ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE++GH+V+R NHVGDWG
Sbjct: 104 HFLIAPVKAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFVGHNVIRANHVGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DEDE+F ++A   VV LQ  D 
Sbjct: 164 TQFGMLIAYLE-KMQNENASDMELSDLEAFYREAKKHYDEDEVFAEKARGYVVKLQGGDE 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
             +K W  + D++ +  Q+ YDRLNVTLT++   GES Y   +  +V  LE KGL   DD
Sbjct: 223 YCRKMWRKLVDITMKQNQRNYDRLNVTLTDKDVMGESLYNPMLPGIVADLEAKGLAVKDD 282

Query: 382 GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G  +++      ++   + + I K DGG+ Y T+D+A  + R E   AD I+Y TD R  
Sbjct: 283 GAVVVFLNEFKNKEGDPLGVIIQKKDGGYLYATTDIACAKYRYETLHADRILYFTDSRQ- 341

Query: 437 HQVLQAIAEEEKKQGISSSSSSQTKGTAKKM----NVPVRDRMSVRDYLSDVFTHAVQVA 492
            Q LQ +    +K G    S +        M    N P + R      L+D+   AV+ A
Sbjct: 342 SQHLQQVWLIVRKAGYVPESVTWDHFNFGMMLGKDNKPFKTRTGGTVKLADLLDEAVERA 401

Query: 493 FPELGDKTASVASTNEKYV 511
              + +K+ ++++  +  V
Sbjct: 402 EKLISEKSTNLSAEEQHQV 420



 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/365 (38%), Positives = 208/365 (56%), Gaps = 26/365 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+    A+  A    G    S A        +FGD+Q N  MA  K       
Sbjct: 1    MNIQTILSEKIKQAMIAA----GADQQSEALVRPSSKAQFGDYQANGVMAAAKKLA---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P D+AQ +          N  L ++I+K+E+A PGF+N+FL+  +   Q   ++ + 
Sbjct: 53   -MPPRDLAQKVVE--------NLDLGEMIEKVEIAGPGFINIFLNPAWLATQTNKMLADH 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                   K   ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE++GH+V+R NHVGDWG
Sbjct: 104  HFLIAPVKAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFVGHNVIRANHVGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DEDE+F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNENASDMELSDLEAFYREAKKHYDEDEVFAEKARGYVVKLQGGDE 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
              +K W  + D++ +  Q+ YDRLNVTLT++   GES Y   +  +V  LE KGL   DD
Sbjct: 223  YCRKMWRKLVDITMKQNQRNYDRLNVTLTDKDVMGESLYNPMLPGIVADLEAKGLAVKDD 282

Query: 1399 GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G  +++      ++   + + I K DGG+ Y T+D+A  + R E   AD I+Y TD R  
Sbjct: 283  GAVVVFLNEFKNKEGDPLGVIIQKKDGGYLYATTDIACAKYRYETLHADRILYFTDSRQS 342

Query: 1454 HQVLQ 1458
              + Q
Sbjct: 343  QHLQQ 347


>gi|427704030|ref|YP_007047252.1| arginyl-tRNA synthetase [Cyanobium gracile PCC 6307]
 gi|427347198|gb|AFY29911.1| arginyl-tRNA synthetase [Cyanobium gracile PCC 6307]
          Length = 607

 Score =  415 bits (1066), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 253/618 (40%), Positives = 354/618 (57%), Gaps = 52/618 (8%)

Query: 481  LSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMALCKIFK 530
            L+ +   A++ AFPE            D   + AS  E     FGDFQ N A+AL K  +
Sbjct: 8    LNSLLLGALERAFPEAAASARQGGQPLDPQLAPASRPE-----FGDFQANGALALAKPLR 62

Query: 531  DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-SRVYA---GEQ 586
                        ++IA+ + + L  + +   +    E+A PGF+N+ +   V A   G +
Sbjct: 63   QA---------PRAIAAAIVAGLEADSAFLALCLPPEIAGPGFINLTVRPEVLAAELGRR 113

Query: 587  IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
            + D  + GV+P        V+VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ GH V+R
Sbjct: 114  LADPRL-GVEP-VAPGGAPVVVDFSSPNIAKEMHVGHLRSTIIGDALARVLEFRGHPVLR 171

Query: 647  LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQ 704
            LNHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+++K RFD D+ F+  + +
Sbjct: 172  LNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYRQAKARFDSDDAFQTTSRE 231

Query: 705  CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 764
             VV LQ  DP  ++AW+++CD SRR+FQ++YDRL++ L ERGESFY  ++E +V  L   
Sbjct: 232  EVVKLQSGDPVSRRAWQLLCDQSRREFQRLYDRLDIRLDERGESFYNPYLEGVVTDLAAA 291

Query: 765  GLLELDDGRKIMWGE-DRGSI----PMTIVKSDGGFTYDTSDLAAIRQRI----EEEKAD 815
            GLL  D G + ++ E D G+     P+ + KSDGGF Y T+DLAAIR R     + + A 
Sbjct: 292  GLLVSDGGAQCVFLEADDGTASQAPPVIVRKSDGGFNYATTDLAAIRYRFAAPPDGDGAR 351

Query: 816  WIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKL 875
             ++YVTD GQ  HF  + + A++AG + P   R++ V FG+V GED KK KTR+GDTV+L
Sbjct: 352  RVIYVTDAGQASHFAGVFQVARRAGWI-PEGGRLEHVPFGLVQGEDGKKLKTRAGDTVRL 410

Query: 876  SELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSF 933
             ELLDE + R    L+ +         E   SE    V    +KYADLS NR  +Y FSF
Sbjct: 411  KELLDEAVERCDADLRRRLEEEGRQEEEAFTSEVATTVGLAAVKYADLSTNRITNYQFSF 470

Query: 934  DKMLDDRGNTAVYLLYAYTRIASIAR-TAGINSEDLRVAAQSTPVSLE--HEKEFALAKT 990
            D+ML   GNTA YLLYA  RIA IAR   G   +    +    P SL     +E+AL + 
Sbjct: 471  DRMLALSGNTAPYLLYAVVRIAGIARKGGGDGEDAAGTSGPEAPASLAFTEPQEWALVRQ 530

Query: 991  LLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLA 1050
            LL+ + V+  V  +L  + LC YL+++   F+ FYD    +  +     +   T RL L 
Sbjct: 531  LLQFDAVIQEVEEELLPNRLCSYLFELCQLFNRFYDQVPVLRAE-----EPARTSRLALC 585

Query: 1051 EATAKVMKKCFDILNIRT 1068
              +A  +K+   +L I T
Sbjct: 586  RLSADTLKQGLGLLGIPT 603



 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 157/367 (42%), Positives = 221/367 (60%), Gaps = 41/367 (11%)

Query: 91  LSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMALCKIFK 140
           L+ +   A++ AFPE            D   + AS  E     FGDFQ N A+AL K  +
Sbjct: 8   LNSLLLGALERAFPEAAASARQGGQPLDPQLAPASRPE-----FGDFQANGALALAKPLR 62

Query: 141 DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-SRVYA---GEQ 196
                       ++IA+ + + L  + +   +    E+A PGF+N+ +   V A   G +
Sbjct: 63  QA---------PRAIAAAIVAGLEADSAFLALCLPPEIAGPGFINLTVRPEVLAAELGRR 113

Query: 197 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
           + D  + GV+P        V+VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ GH V+R
Sbjct: 114 LADPRL-GVEP-VAPGGAPVVVDFSSPNIAKEMHVGHLRSTIIGDALARVLEFRGHPVLR 171

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQ 314
           LNHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+++K RFD D+ F+  + +
Sbjct: 172 LNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYRQAKARFDSDDAFQTTSRE 231

Query: 315 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 374
            VV LQ  DP  ++AW+++CD SRR+FQ++YDRL++ L ERGESFY  ++E +V  L   
Sbjct: 232 EVVKLQSGDPVSRRAWQLLCDQSRREFQRLYDRLDIRLDERGESFYNPYLEGVVTDLAAA 291

Query: 375 GLLELDDGRKIMWGE-DRGSI----PMTIVKSDGGFTYDTSDLAAIRQRI----EEEKAD 425
           GLL  D G + ++ E D G+     P+ + KSDGGF Y T+DLAAIR R     + + A 
Sbjct: 292 GLLVSDGGAQCVFLEADDGTASQAPPVIVRKSDGGFNYATTDLAAIRYRFAAPPDGDGAR 351

Query: 426 WIVYVTD 432
            ++YVTD
Sbjct: 352 RVIYVTD 358



 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 157/367 (42%), Positives = 221/367 (60%), Gaps = 41/367 (11%)

Query: 1108 LSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMALCKIFK 1157
            L+ +   A++ AFPE            D   + AS  E     FGDFQ N A+AL K  +
Sbjct: 8    LNSLLLGALERAFPEAAASARQGGQPLDPQLAPASRPE-----FGDFQANGALALAKPLR 62

Query: 1158 DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-SRVYA---GEQ 1213
                        ++IA+ + + L  + +   +    E+A PGF+N+ +   V A   G +
Sbjct: 63   QA---------PRAIAAAIVAGLEADSAFLALCLPPEIAGPGFINLTVRPEVLAAELGRR 113

Query: 1214 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
            + D  + GV+P        V+VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ GH V+R
Sbjct: 114  LADPRL-GVEP-VAPGGAPVVVDFSSPNIAKEMHVGHLRSTIIGDALARVLEFRGHPVLR 171

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQ 1331
            LNHVGDWGTQFGMLI HL+   P+ L  +  +   DL AFY+++K RFD D+ F+  + +
Sbjct: 172  LNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYRQAKARFDSDDAFQTTSRE 231

Query: 1332 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 1391
             VV LQ  DP  ++AW+++CD SRR+FQ++YDRL++ L ERGESFY  ++E +V  L   
Sbjct: 232  EVVKLQSGDPVSRRAWQLLCDQSRREFQRLYDRLDIRLDERGESFYNPYLEGVVTDLAAA 291

Query: 1392 GLLELDDGRKIMWGE-DRGSI----PMTIVKSDGGFTYDTSDLAAIRQRI----EEEKAD 1442
            GLL  D G + ++ E D G+     P+ + KSDGGF Y T+DLAAIR R     + + A 
Sbjct: 292  GLLVSDGGAQCVFLEADDGTASQAPPVIVRKSDGGFNYATTDLAAIRYRFAAPPDGDGAR 351

Query: 1443 WIVYVTD 1449
             ++YVTD
Sbjct: 352  RVIYVTD 358


>gi|194476818|ref|YP_002048997.1| arginyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191825|gb|ACB42787.1| arginyl-tRNA synthetase [Paulinella chromatophora]
          Length = 602

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 250/625 (40%), Positives = 364/625 (58%), Gaps = 59/625 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMA 524
            + +   L+++   A++  FPE            D    +AS  E     FGDFQ N  +A
Sbjct: 2    LGIAQELNNLLLTAMENMFPEAVILATDSGKPLDPQLIIASKPE-----FGDFQVNGPLA 56

Query: 525  LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 584
            L KI      K         IA+ + + L   PS +++     +A PGF+N+ L      
Sbjct: 57   LSKILGKPPRK---------IATDLVNALLAIPSFSELCSPPIIAGPGFINLVLKPELLK 107

Query: 585  EQIKDIIVN-GVQPPTLNKK----LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 639
             +I+ ++ N  +  P + +       V++DFSSPNIAK+MHVGHLRST+IGD ++R+LE+
Sbjct: 108  SEIRKVLSNPNIGVPNVTETEDHLFPVIIDFSSPNIAKDMHVGHLRSTLIGDCLARILEF 167

Query: 640  LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEI 697
             G++V+RLNHVGDWGTQFGMLI HL+   P  L     I   DL AFY+++K RFD D+ 
Sbjct: 168  RGYNVLRLNHVGDWGTQFGMLITHLKQVAPQALINPDVIELGDLVAFYRQAKNRFDNDQS 227

Query: 698  FKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQL 757
            F+  + + VV LQ  DPD +KAW+++CD SRR+FQ IYDRL++T+TERGESFY  ++E++
Sbjct: 228  FQIASREEVVRLQSGDPDSRKAWQLLCDQSRREFQVIYDRLDITITERGESFYNSYLEEV 287

Query: 758  VPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR---- 808
            +  L+   LL  D+G + ++     G+    +P+ I KSDGGF Y T+DLAAIR R    
Sbjct: 288  ILDLDALDLLVTDEGARCVFLEGVMGKSNKPLPVIIQKSDGGFNYATTDLAAIRYRFGVI 347

Query: 809  IEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTR 868
             E + A  IVYVTD GQ  HF  + + A++AG + P   R++ V FG+V G+D KK KTR
Sbjct: 348  FEGDGASRIVYVTDSGQANHFAGIFQIARRAGWV-PTNGRLEHVPFGLVQGQDGKKLKTR 406

Query: 869  SGDTVKLSELLDEGLRRS-LD---KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            +GDTV+L +LLDE + R+ +D   +L ++NR  E     + +  + V    +KYADLS N
Sbjct: 407  AGDTVRLKDLLDEAIERADIDLRKRLAEENRSEE--EIFIKDVSKKVGIAAVKYADLSQN 464

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQ-STPVSLEHEK 983
            R   Y F+FD+ML   GNTA YLLYA  RIA I R +    + L      S P+      
Sbjct: 465  RITSYQFNFDRMLSLNGNTAPYLLYAMVRIAGILRKSSKQHDTLEKQLHFSEPI------ 518

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E+AL + +LR + +++ V  +L    LC YL+++S  F+ FYD    + K  E  + +  
Sbjct: 519  EWALVRHILRFDLIIIEVEEELLPSRLCSYLFELSQLFNRFYDQVPVL-KAKEPNLSS-- 575

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL+L + TA  +K   ++L I T
Sbjct: 576  --RLILCQLTADTLKMGLNLLGIPT 598



 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/374 (41%), Positives = 223/374 (59%), Gaps = 40/374 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMA 134
           + +   L+++   A++  FPE            D    +AS  E     FGDFQ N  +A
Sbjct: 2   LGIAQELNNLLLTAMENMFPEAVILATDSGKPLDPQLIIASKPE-----FGDFQVNGPLA 56

Query: 135 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 194
           L KI      K         IA+ + + L   PS +++     +A PGF+N+ L      
Sbjct: 57  LSKILGKPPRK---------IATDLVNALLAIPSFSELCSPPIIAGPGFINLVLKPELLK 107

Query: 195 EQIKDIIVN-GVQPPTLNKK----LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 249
            +I+ ++ N  +  P + +       V++DFSSPNIAK+MHVGHLRST+IGD ++R+LE+
Sbjct: 108 SEIRKVLSNPNIGVPNVTETEDHLFPVIIDFSSPNIAKDMHVGHLRSTLIGDCLARILEF 167

Query: 250 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEI 307
            G++V+RLNHVGDWGTQFGMLI HL+   P  L     I   DL AFY+++K RFD D+ 
Sbjct: 168 RGYNVLRLNHVGDWGTQFGMLITHLKQVAPQALINPDVIELGDLVAFYRQAKNRFDNDQS 227

Query: 308 FKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQL 367
           F+  + + VV LQ  DPD +KAW+++CD SRR+FQ IYDRL++T+TERGESFY  ++E++
Sbjct: 228 FQIASREEVVRLQSGDPDSRKAWQLLCDQSRREFQVIYDRLDITITERGESFYNSYLEEV 287

Query: 368 VPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR---- 418
           +  L+   LL  D+G + ++     G+    +P+ I KSDGGF Y T+DLAAIR R    
Sbjct: 288 ILDLDALDLLVTDEGARCVFLEGVMGKSNKPLPVIIQKSDGGFNYATTDLAAIRYRFGVI 347

Query: 419 IEEEKADWIVYVTD 432
            E + A  IVYVTD
Sbjct: 348 FEGDGASRIVYVTD 361



 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/374 (41%), Positives = 223/374 (59%), Gaps = 40/374 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMA 1151
            + +   L+++   A++  FPE            D    +AS  E     FGDFQ N  +A
Sbjct: 2    LGIAQELNNLLLTAMENMFPEAVILATDSGKPLDPQLIIASKPE-----FGDFQVNGPLA 56

Query: 1152 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 1211
            L KI      K         IA+ + + L   PS +++     +A PGF+N+ L      
Sbjct: 57   LSKILGKPPRK---------IATDLVNALLAIPSFSELCSPPIIAGPGFINLVLKPELLK 107

Query: 1212 EQIKDIIVN-GVQPPTLNKK----LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEY 1266
             +I+ ++ N  +  P + +       V++DFSSPNIAK+MHVGHLRST+IGD ++R+LE+
Sbjct: 108  SEIRKVLSNPNIGVPNVTETEDHLFPVIIDFSSPNIAKDMHVGHLRSTLIGDCLARILEF 167

Query: 1267 LGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEI 1324
             G++V+RLNHVGDWGTQFGMLI HL+   P  L     I   DL AFY+++K RFD D+ 
Sbjct: 168  RGYNVLRLNHVGDWGTQFGMLITHLKQVAPQALINPDVIELGDLVAFYRQAKNRFDNDQS 227

Query: 1325 FKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQL 1384
            F+  + + VV LQ  DPD +KAW+++CD SRR+FQ IYDRL++T+TERGESFY  ++E++
Sbjct: 228  FQIASREEVVRLQSGDPDSRKAWQLLCDQSRREFQVIYDRLDITITERGESFYNSYLEEV 287

Query: 1385 VPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQR---- 1435
            +  L+   LL  D+G + ++     G+    +P+ I KSDGGF Y T+DLAAIR R    
Sbjct: 288  ILDLDALDLLVTDEGARCVFLEGVMGKSNKPLPVIIQKSDGGFNYATTDLAAIRYRFGVI 347

Query: 1436 IEEEKADWIVYVTD 1449
             E + A  IVYVTD
Sbjct: 348  FEGDGASRIVYVTD 361


>gi|419839061|ref|ZP_14362479.1| arginine--tRNA ligase [Haemophilus haemolyticus HK386]
 gi|386909772|gb|EIJ74436.1| arginine--tRNA ligase [Haemophilus haemolyticus HK386]
          Length = 577

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 244/602 (40%), Positives = 350/602 (58%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSEN 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                    K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGIQATDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQGGDE 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
              +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL   DD
Sbjct: 223  YCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAVEDD 282

Query: 772  GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q 
Sbjct: 283  GALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE + R+
Sbjct: 343  QHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNTA Y
Sbjct: 402  TVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTRI SI     INS  L  A    P++LE +KE ALA  LL+  + +  V ++  
Sbjct: 460  MQYAYTRIRSIFNKTDINSTALLAA----PLTLEDDKERALAIKLLQFEEAVQTVGKEGT 515

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLY+++  FS FY++C  +  + E    +V   RL LA  T K +K+  ++L I
Sbjct: 516  PHVLCAYLYELAGIFSSFYEHCPILNAEDE----SVKLSRLKLALLTEKTLKQGLELLGI 571

Query: 1067 RT 1068
            RT
Sbjct: 572  RT 573



 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/438 (35%), Positives = 239/438 (54%), Gaps = 29/438 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSEN 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                   K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104 NLGIQATDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ  D 
Sbjct: 164 TQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQGGDE 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
             +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL   DD
Sbjct: 223 YCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAVEDD 282

Query: 382 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283 GALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 437 HQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVAF 493
             + QA     K   +  S S + K     +     P + R      L+D+   A++ A 
Sbjct: 343 QHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERAT 402

Query: 494 PELGDKTASVASTNEKYV 511
             + +K  ++++  ++ V
Sbjct: 403 VLINEKNTNLSNDEKEAV 420



 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/365 (39%), Positives = 210/365 (57%), Gaps = 26/365 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSEN 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                    K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGIQATDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQGGDE 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
              +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL   DD
Sbjct: 223  YCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAVEDD 282

Query: 1399 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283  GALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 1454 HQVLQ 1458
              + Q
Sbjct: 343  QHMQQ 347


>gi|332140679|ref|YP_004426417.1| arginyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|410860886|ref|YP_006976120.1| arginyl-tRNA ligase [Alteromonas macleodii AltDE1]
 gi|238693246|sp|B4RU34.1|SYR_ALTMD RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|327550701|gb|AEA97419.1| arginyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|410818148|gb|AFV84765.1| arginyl-tRNA ligase [Alteromonas macleodii AltDE1]
          Length = 576

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 246/606 (40%), Positives = 357/606 (58%), Gaps = 46/606 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++   L + FT A+Q    E+G + A V  +      +FG++Q N AMAL K  K K  
Sbjct: 1    MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ----IKDI 590
               P DIA+ I   V         L  +  K+EVA PGF+NV L+  +   Q    + D 
Sbjct: 54   ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLNDAWLANQCELSLTDP 102

Query: 591  IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
             +   + P  N    ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+
Sbjct: 103  RLGIAKSPEQN----IVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHM 158

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGML+AHL DK  + + ++  ++DL+ FY+E+K RFDE+E F  RA + VV LQ
Sbjct: 159  GDWGTQFGMLLAHLSDKLQEEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQ 217

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 767
              D      WE   DVS    +++YD+LNV+LT +   GES Y   +  ++  L+ KGL 
Sbjct: 218  GGDAQCLALWEKFIDVSITHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKTKGLA 277

Query: 768  ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              D G ++++     +  G+  + IV KS GG+ Y T+DLAA+R R  +  AD  + +TD
Sbjct: 278  VEDQGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTD 337

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q +HF+  E   +KAG +   +T  +   FG++LG D K FKTR+G TVKL ELLDE 
Sbjct: 338  ARQALHFKQTEIVGRKAGFMKEEQT-YEHCPFGMMLGSDGKPFKTRTGGTVKLVELLDEA 396

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            + R+   + +  R  +L+  EL E  + V  G +KYADLS NR  DY+F++D ML   GN
Sbjct: 397  VERAGKLIAE--RDNDLSEEELKEVARKVGIGAVKYADLSKNRTTDYMFNWDSMLSFEGN 454

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA YL YAYTR+ S+ R AG++     +A     + L  ++E ALA  L++  +V+ +V+
Sbjct: 455  TAPYLQYAYTRVKSLFRKAGVD-----MATMPVDIKLVEKQEHALAVLLMQFEEVIGMVS 509

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
            R+   H LC YLYD+++AF  FY+ C  ++   EG    V   RL L+   AK ++K   
Sbjct: 510  REATPHVLCTYLYDVASAFMTFYEACPMLK---EGIEPQVRDSRLALSALVAKTLEKGLT 566

Query: 1063 ILNIRT 1068
            +L I T
Sbjct: 567  LLGIET 572



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/362 (40%), Positives = 214/362 (59%), Gaps = 35/362 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++   L + FT A+Q    E+G + A V  +      +FG++Q N AMAL K  K K  
Sbjct: 1   MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ----IKDI 200
              P DIA+ I   V         L  +  K+EVA PGF+NV L+  +   Q    + D 
Sbjct: 54  ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLNDAWLANQCELSLTDP 102

Query: 201 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
            +   + P  N    ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+
Sbjct: 103 RLGIAKSPEQN----IVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHM 158

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGML+AHL DK  + + ++  ++DL+ FY+E+K RFDE+E F  RA + VV LQ
Sbjct: 159 GDWGTQFGMLLAHLSDKLQEEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQ 217

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 377
             D      WE   DVS    +++YD+LNV+LT +   GES Y   +  ++  L+ KGL 
Sbjct: 218 GGDAQCLALWEKFIDVSITHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKTKGLA 277

Query: 378 ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D G ++++     +  G+  + IV KS GG+ Y T+DLAA+R R  +  AD  + +TD
Sbjct: 278 VEDQGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTD 337

Query: 433 HR 434
            R
Sbjct: 338 AR 339



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/362 (40%), Positives = 214/362 (59%), Gaps = 35/362 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++   L + FT A+Q    E+G + A V  +      +FG++Q N AMAL K  K K  
Sbjct: 1    MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ----IKDI 1217
               P DIA+ I   V         L  +  K+EVA PGF+NV L+  +   Q    + D 
Sbjct: 54   ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLNDAWLANQCELSLTDP 102

Query: 1218 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
             +   + P  N    ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+
Sbjct: 103  RLGIAKSPEQN----IVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHM 158

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGML+AHL DK  + + ++  ++DL+ FY+E+K RFDE+E F  RA + VV LQ
Sbjct: 159  GDWGTQFGMLLAHLSDKLQEEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQ 217

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 1394
              D      WE   DVS    +++YD+LNV+LT +   GES Y   +  ++  L+ KGL 
Sbjct: 218  GGDAQCLALWEKFIDVSITHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKTKGLA 277

Query: 1395 ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D G ++++     +  G+  + IV KS GG+ Y T+DLAA+R R  +  AD  + +TD
Sbjct: 278  VEDQGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTD 337

Query: 1450 HR 1451
             R
Sbjct: 338  AR 339


>gi|378774260|ref|YP_005176503.1| srginyl-tRNA synthase [Pasteurella multocida 36950]
 gi|356596808|gb|AET15534.1| srginyl-tRNA synthase [Pasteurella multocida 36950]
          Length = 577

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/600 (39%), Positives = 355/600 (59%), Gaps = 41/600 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 596
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
                 +   V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  A---TETQTVVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 657  FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 716
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 717  KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 773
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 774  KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q  H
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
             +      +KAG + P+  +++   FG++LG+D K FKTR+G TVKL++LLDE + R+  
Sbjct: 345  MQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQ 403

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             +++K+  T L+  E +   +AVA G +KYADLS NR  DYVF +D ML   GNTA Y+ 
Sbjct: 404  LIQEKS--TALSAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPYMQ 461

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YAYTRI SI   + +N +DL      +PV L +EKE  LA  LL+  + +  V ++   H
Sbjct: 462  YAYTRIRSIFNRSELNEQDL----SESPVVLSNEKERLLAIKLLQFEEAIQFVAKEGTPH 517

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             LC YLY+++ AFS FY++C  +  + E     +   RL LA  T K +K+  D+L I+T
Sbjct: 518  VLCTYLYELAGAFSSFYEHCPILNNEDE----QIKRSRLKLALLTEKTLKQGLDLLGIKT 573



 Score =  248 bits (632), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 153/430 (35%), Positives = 237/430 (55%), Gaps = 33/430 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3   IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 206
            AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58  FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
                +   V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109 A---TETQTVVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 267 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 326
           FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166 FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 327 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 383
           +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225 RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 384 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
            +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285 FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 439 VLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVAFPE 495
           + QA     K   +  S   + K     +     P + R      L+D+   AV+ A   
Sbjct: 345 MQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQL 404

Query: 496 LGDKTASVAS 505
           + +K+ ++++
Sbjct: 405 IQEKSTALSA 414



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 211/363 (58%), Gaps = 30/363 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 1223
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
                 +   V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  A---TETQTVVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 1284 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 1343
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 1344 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 1400
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 1401 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 1455
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 1456 VLQ 1458
            + Q
Sbjct: 345  MQQ 347


>gi|78778575|ref|YP_396687.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|109895016|sp|Q31CZ4.1|SYR_PROM9 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|78712074|gb|ABB49251.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 604

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/581 (41%), Positives = 350/581 (60%), Gaps = 47/581 (8%)

Query: 512  HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
             +FGD+QCN  + L KI+K     K P +I++    +    L  N S++K+   +E+A P
Sbjct: 43   EEFGDYQCNVCLCLSKIYK-----KKPREISEDFVYL----LNKNKSISKLCKSLEIAGP 93

Query: 572  GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 624
            GF+N+ L   V   E   +I       P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDEVLINEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 625  RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 682
            RSTIIGD+ISR+ E  G+ V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYQVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 683  AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
             FYK SKKRFD +  F+KR+ + VV LQ  D    +AW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKASKKRFDNESEFQKRSREEVVKLQSGDSKSIQAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 743  TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 797
             ERGESFY   ++ ++  L+ K +L  D G K      M  ++   +P+ + K DGGF Y
Sbjct: 274  KERGESFYNPFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLPLIVQKKDGGFNY 333

Query: 798  DTSDLAAIRQRIEE----EKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
             T+DLAAIR R  +    + A  I+YVTD GQ  HF  + + AKKA  + P+K ++D V 
Sbjct: 334  ATTDLAAIRYRFNKAPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWI-PDKCQVDHVP 392

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQ 909
            FG+V G D KK KTR G+T++L +LL+E +RR+    L +L+D++R+   T   ++   +
Sbjct: 393  FGLVQGIDGKKLKTREGETIRLKDLLNEAVRRAKEDLLKRLEDEDRYE--TEEFIANTSR 450

Query: 910  AVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGI--NSED 967
             +  G +KYADLS NR  +Y FSFDKML   GNTA YLLY   RI+ I R      +SED
Sbjct: 451  IIGLGAVKYADLSQNRITNYQFSFDKMLSLNGNTAPYLLYTLVRISGIKRKNDFVYDSED 510

Query: 968  LRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDN 1027
             +       ++ EH+ E+ L + LL+ ++V++ + +DL  + LC YL+++   F+ FYD 
Sbjct: 511  FQY------INYEHKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYDQ 564

Query: 1028 CYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               ++++     K +   RL L + TAK +K   ++L I T
Sbjct: 565  VPILKEE-----KNIKISRLNLCDLTAKTLKLSLELLGIET 600



 Score =  259 bits (662), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 202/330 (61%), Gaps = 27/330 (8%)

Query: 122 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
            +FGD+QCN  + L KI+K     K P +I++    +    L  N S++K+   +E+A P
Sbjct: 43  EEFGDYQCNVCLCLSKIYK-----KKPREISEDFVYL----LNKNKSISKLCKSLEIAGP 93

Query: 182 GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 234
           GF+N+ L   V   E   +I       P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94  GFINIKLKDEVLINEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 235 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 292
           RSTIIGD+ISR+ E  G+ V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154 RSTIIGDSISRIFELRGYQVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FYK SKKRFD +  F+KR+ + VV LQ  D    +AW+++CD SR++F +IY  L + +
Sbjct: 214 EFYKASKKRFDNESEFQKRSREEVVKLQSGDSKSIQAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 407
            ERGESFY   ++ ++  L+ K +L  D G K      M  ++   +P+ + K DGGF Y
Sbjct: 274 KERGESFYNPFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLPLIVQKKDGGFNY 333

Query: 408 DTSDLAAIRQRIEE----EKADWIVYVTDH 433
            T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334 ATTDLAAIRYRFNKAPNGDDASRIIYVTDH 363



 Score =  259 bits (662), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 202/330 (61%), Gaps = 27/330 (8%)

Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             +FGD+QCN  + L KI+K     K P +I++    +    L  N S++K+   +E+A P
Sbjct: 43   EEFGDYQCNVCLCLSKIYK-----KKPREISEDFVYL----LNKNKSISKLCKSLEIAGP 93

Query: 1199 GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 1251
            GF+N+ L   V   E   +I       P + K L      +V+VDFSSPNIAKEMHVGHL
Sbjct: 94   GFINIKLKDEVLINEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHL 153

Query: 1252 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 1309
            RSTIIGD+ISR+ E  G+ V+RLNHVGDWGTQFGMLI  L+D + + L +     I+DL 
Sbjct: 154  RSTIIGDSISRIFELRGYQVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FYK SKKRFD +  F+KR+ + VV LQ  D    +AW+++CD SR++F +IY  L + +
Sbjct: 214  EFYKASKKRFDNESEFQKRSREEVVKLQSGDSKSIQAWKLLCDQSRKEFDEIYKNLKIKI 273

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 1424
             ERGESFY   ++ ++  L+ K +L  D G K      M  ++   +P+ + K DGGF Y
Sbjct: 274  KERGESFYNPFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLPLIVQKKDGGFNY 333

Query: 1425 DTSDLAAIRQRIEE----EKADWIVYVTDH 1450
             T+DLAAIR R  +    + A  I+YVTDH
Sbjct: 334  ATTDLAAIRYRFNKAPNGDDASRIIYVTDH 363


>gi|322513913|ref|ZP_08066990.1| arginine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120248|gb|EFX92201.1| arginine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 584

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 242/567 (42%), Positives = 344/567 (60%), Gaps = 41/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 44   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 90

Query: 573  FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 91   FINIFLNQQWLASQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 147

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 148  GDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 206

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 207  EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 266

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 267  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 326

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +AA + R E   AD ++  +D  Q  H +      +KAG + P    ++   FG++LG+D
Sbjct: 327  IAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYV-PESFSLEHPFFGMMLGKD 385

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL +LLDE + R+ DKL  + R T+LT  E +   +AVA G +KY+DL
Sbjct: 386  GKPFKTRSGGTVKLKDLLDEAVERA-DKLISE-RSTDLTAEEKAAVVEAVAIGSVKYSDL 443

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTRI SI   AGIN+  L     +  + L  
Sbjct: 444  SKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFNRAGINANGL-----NGEIGLIE 498

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE ALA  LL+  +VL  V +D   H LC+YLY+++ AFS FY+ C  +  +     + 
Sbjct: 499  DKERALAVKLLQFEEVLNGVAKDGMPHILCQYLYELAGAFSSFYEACPMLNAE-----EN 553

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K+  D+L I+T
Sbjct: 554  VKNSRLRLATLTAKTLKQGLDLLGIKT 580



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 202/331 (61%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 44  EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 90

Query: 183 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 91  FINIFLNQQWLASQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 147

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 148 GDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 206

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 207 EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 266

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 267 ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 326

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +AA + R E   AD ++  +D R    + QA
Sbjct: 327 IAAAKYRYETLNADRVLVFSDSRQAQHMQQA 357



 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 201/330 (60%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 44   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 90

Query: 1200 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 91   FINIFLNQQWLASQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 147

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 148  GDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 206

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 207  EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 266

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 267  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 326

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +AA + R E   AD ++  +D R    + Q
Sbjct: 327  IAAAKYRYETLNADRVLVFSDSRQAQHMQQ 356


>gi|72383390|ref|YP_292745.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|109895017|sp|Q46HI6.1|SYR_PROMT RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|72003240|gb|AAZ59042.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 607

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 247/625 (39%), Positives = 370/625 (59%), Gaps = 54/625 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 529
            + +   L +    A    FP+     KT+S+ + +        +FGDFQ N A++L K  
Sbjct: 2    LEISARLEEALNRAFIKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61

Query: 530  KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVYA 583
            K     + P +IAQ IA+    +L  +    ++ +   +A PGF+N+       +S ++ 
Sbjct: 62   K-----QPPREIAQKIAN----QLQKDNDFVRMCNPPRIAGPGFINLSINSKTLISEIHV 112

Query: 584  -------GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 636
                   G  +K    + ++    N   RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113  RLNDKRLGVPLKKFSTDKIEEGKSNN--RVILDFSSPNIAKEMHVGHLRSTIIGDSLARI 170

Query: 637  LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 694
            LE+ G++V+RLNHVGDWGTQFGMLI HL++  P+ L TK    I+DL  FY+++KKRFDE
Sbjct: 171  LEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 754
            D+IF+ ++   VV LQ  D +   AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231  DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290

Query: 755  EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 809
              ++  L+ K LL  D G + ++     G++    P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291  VDVINDLKNKKLLINDQGAQCIFLDGLVGKNGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350

Query: 810  ----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
                  + A  ++YVTD GQ  HF  + + AK A  + P   +++ V FG+V GED KK 
Sbjct: 351  TIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANWI-PTDCQIEHVPFGLVQGEDGKKL 409

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSH 923
            KTRSG+T++L +LLDE ++R+ + LK++      +  E  + +    V    IKYADLS 
Sbjct: 410  KTRSGETIRLVDLLDEAIQRAKNDLKNRLNTERRSENENFIDKVSTTVGIASIKYADLSQ 469

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  +Y FSFDKML  +GNTA YLLYA  RIA I+R  G    DL V++ +  +     +
Sbjct: 470  NRISNYQFSFDKMLSLQGNTAPYLLYALVRIAGISRKGG----DLNVSSHN--IQFNESQ 523

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E+ L + LL+++ ++  V ++L  + LC YL+++S  F+ FYD    ++     +     
Sbjct: 524  EWELIRKLLQLDYIIAEVEKELLPNRLCGYLFELSQTFNRFYDQVPILKASEPSR----- 578

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL+L   TA  +K    +L I T
Sbjct: 579  ASRLILCSITADTLKLGMSLLGIPT 603



 Score =  262 bits (670), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/377 (41%), Positives = 230/377 (61%), Gaps = 40/377 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 139
           + +   L +    A    FP+     KT+S+ + +        +FGDFQ N A++L K  
Sbjct: 2   LEISARLEEALNRAFIKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61

Query: 140 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVYA 193
           K     + P +IAQ IA+    +L  +    ++ +   +A PGF+N+       +S ++ 
Sbjct: 62  K-----QPPREIAQKIAN----QLQKDNDFVRMCNPPRIAGPGFINLSINSKTLISEIHV 112

Query: 194 -------GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 246
                  G  +K    + ++    N   RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113 RLNDKRLGVPLKKFSTDKIEEGKSNN--RVILDFSSPNIAKEMHVGHLRSTIIGDSLARI 170

Query: 247 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 304
           LE+ G++V+RLNHVGDWGTQFGMLI HL++  P+ L TK    I+DL  FY+++KKRFDE
Sbjct: 171 LEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 364
           D+IF+ ++   VV LQ  D +   AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231 DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290

Query: 365 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 419
             ++  L+ K LL  D G + ++     G++    P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291 VDVINDLKNKKLLINDQGAQCIFLDGLVGKNGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350

Query: 420 ----EEEKADWIVYVTD 432
                 + A  ++YVTD
Sbjct: 351 TIPPHGDGACRLIYVTD 367



 Score =  262 bits (670), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/377 (41%), Positives = 230/377 (61%), Gaps = 40/377 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 1156
            + +   L +    A    FP+     KT+S+ + +        +FGDFQ N A++L K  
Sbjct: 2    LEISARLEEALNRAFIKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61

Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVYA 1210
            K     + P +IAQ IA+    +L  +    ++ +   +A PGF+N+       +S ++ 
Sbjct: 62   K-----QPPREIAQKIAN----QLQKDNDFVRMCNPPRIAGPGFINLSINSKTLISEIHV 112

Query: 1211 -------GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 1263
                   G  +K    + ++    N   RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113  RLNDKRLGVPLKKFSTDKIEEGKSNN--RVILDFSSPNIAKEMHVGHLRSTIIGDSLARI 170

Query: 1264 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 1321
            LE+ G++V+RLNHVGDWGTQFGMLI HL++  P+ L TK    I+DL  FY+++KKRFDE
Sbjct: 171  LEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 1381
            D+IF+ ++   VV LQ  D +   AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231  DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290

Query: 1382 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 1436
              ++  L+ K LL  D G + ++     G++    P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291  VDVINDLKNKKLLINDQGAQCIFLDGLVGKNGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350

Query: 1437 ----EEEKADWIVYVTD 1449
                  + A  ++YVTD
Sbjct: 351  TIPPHGDGACRLIYVTD 367


>gi|383310194|ref|YP_005363004.1| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
            HN06]
 gi|386834328|ref|YP_006239643.1| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
            3480]
 gi|380871466|gb|AFF23833.1| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
            HN06]
 gi|385201029|gb|AFI45884.1| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
            3480]
          Length = 577

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 354/600 (59%), Gaps = 41/600 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 596
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEITEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 657  FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 716
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 717  KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 773
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 774  KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q  H
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
             +      +KAG + P+  +++   FG++LG+D K FKTR+G TVKL++LLDE + R+  
Sbjct: 345  MQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQ 403

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             +++K+  T L+  E +   +AVA G +KYADLS NR  DYVF +D ML   GNTA Y+ 
Sbjct: 404  LIQEKS--TALSAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPYMQ 461

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YAYTRI SI   + +N +DL      +PV L +EKE  LA  LL+  + + +V ++   H
Sbjct: 462  YAYTRIRSIFNRSELNEQDL----SESPVVLSNEKERLLAIKLLQFEEAIQIVAKEGTPH 517

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             LC YLY+++  FS FY++C  +  + E     +   RL LA  T K +K+  D+L I+T
Sbjct: 518  VLCTYLYELAGVFSSFYEHCPILNNEDE----QIKRSRLKLALLTEKTLKQGLDLLGIKT 573



 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/430 (35%), Positives = 236/430 (54%), Gaps = 33/430 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3   IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 206
            AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58  FAQQVIEQL--------DLSEITEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
                    V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109 ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 267 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 326
           FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166 FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 327 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 383
           +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225 RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 384 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
            +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285 FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 439 VLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVAFPE 495
           + QA     K   +  S   + K     +     P + R      L+D+   AV+ A   
Sbjct: 345 MQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQL 404

Query: 496 LGDKTASVAS 505
           + +K+ ++++
Sbjct: 405 IQEKSTALSA 414



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 210/363 (57%), Gaps = 30/363 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 1223
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEITEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 1284 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 1343
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 1344 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 1400
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 1401 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 1455
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 1456 VLQ 1458
            + Q
Sbjct: 345  MQQ 347


>gi|161723314|ref|NP_245488.2| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
            Pm70]
 gi|425065339|ref|ZP_18468459.1| Arginyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
            P1059]
 gi|404384203|gb|EJZ80646.1| Arginyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
            P1059]
          Length = 577

 Score =  412 bits (1058), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 354/600 (59%), Gaps = 41/600 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 596
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 657  FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 716
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 717  KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 773
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 774  KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q  H
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
             +      +KAG + P+  +++   FG++LG+D K FKTR+G TVKL++LLDE + R+  
Sbjct: 345  MQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQ 403

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             +++K+  T L+  E +   +AVA G +KYADLS NR  DYVF +D ML   GNTA Y+ 
Sbjct: 404  LIQEKS--TALSAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPYMQ 461

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YAYTRI SI   + +N +DL      +PV L +EKE  LA  LL+  + + +V ++   H
Sbjct: 462  YAYTRIRSIFNRSELNEQDL----SESPVVLSNEKERLLAIKLLQFEEAIQIVAKEGTPH 517

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             LC YLY+++  FS FY++C  +  + E     +   RL LA  T K +K+  D+L I+T
Sbjct: 518  VLCTYLYELAGVFSSFYEHCPILNNEDE----QIKRSRLKLALLTEKTLKQGLDLLGIKT 573



 Score =  248 bits (632), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 153/430 (35%), Positives = 236/430 (54%), Gaps = 33/430 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3   IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 206
            AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58  FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
                    V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109 ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 267 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 326
           FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166 FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 327 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 383
           +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225 RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 384 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
            +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285 FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 439 VLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVAFPE 495
           + QA     K   +  S   + K     +     P + R      L+D+   AV+ A   
Sbjct: 345 MQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQL 404

Query: 496 LGDKTASVAS 505
           + +K+ ++++
Sbjct: 405 IQEKSTALSA 414



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 210/363 (57%), Gaps = 30/363 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 1223
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 1284 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 1343
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 1344 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 1400
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 1401 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 1455
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 1456 VLQ 1458
            + Q
Sbjct: 345  MQQ 347


>gi|373467410|ref|ZP_09558709.1| arginine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
 gi|371758945|gb|EHO47701.1| arginine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
          Length = 577

 Score =  412 bits (1058), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 244/605 (40%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSQK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++LE +KE ALA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTLEDDKERALAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    +V   RL LA  T K +K+  ++
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SVKLSRLKLALLTEKTLKQGLEL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  254 bits (649), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 158/441 (35%), Positives = 242/441 (54%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSQK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280 EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/368 (39%), Positives = 213/368 (57%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSQK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|406596043|ref|YP_006747173.1| arginyl-tRNA ligase [Alteromonas macleodii ATCC 27126]
 gi|407682987|ref|YP_006798161.1| arginyl-tRNA ligase [Alteromonas macleodii str. 'English Channel
            673']
 gi|407686899|ref|YP_006802072.1| arginyl-tRNA ligase [Alteromonas macleodii str. 'Balearic Sea AD45']
 gi|406373364|gb|AFS36619.1| arginyl-tRNA ligase [Alteromonas macleodii ATCC 27126]
 gi|407244598|gb|AFT73784.1| arginyl-tRNA ligase [Alteromonas macleodii str. 'English Channel
            673']
 gi|407290279|gb|AFT94591.1| arginyl-tRNA ligase [Alteromonas macleodii str. 'Balearic Sea AD45']
          Length = 576

 Score =  411 bits (1057), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 242/602 (40%), Positives = 356/602 (59%), Gaps = 38/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++   L + FT A+Q    E+G + A V  +      +FG++Q N AMAL K  K K  
Sbjct: 1    MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P DIA+ I   V         L  +  K+EVA PGF+NV L+  +   Q +  + + 
Sbjct: 54   ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLNDEWLSNQCELSLTDP 102

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                  +K+  ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+GDWG
Sbjct: 103  RLGIAKSKEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHMGDWG 162

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGML+AHL DK  D + ++  ++DL+ FY+E+K RFDE+E F  RA + VV LQ  D 
Sbjct: 163  TQFGMLLAHLSDKLQDEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQGGDA 221

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
                 WE   DVS    +++YD+LNV+LT +   GES Y   +  ++  L+ KGL   D 
Sbjct: 222  QCLALWEKFIDVSIAHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKAKGLAVEDQ 281

Query: 772  GRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G ++++     +  G+  + IV KS GG+ Y T+DLAA+R R  +  AD  + +TD  Q 
Sbjct: 282  GAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTDARQA 341

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
            +HF+  E   +KAG +   +T  +   FG++LG D K FKTR+G TVKL ELLDE + R+
Sbjct: 342  LHFKQTEIVGRKAGFMKEEQT-YEHCPFGMMLGSDGKPFKTRTGGTVKLVELLDEAVERA 400

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               + +  R  +L+  EL E    V  G +KYADLS NR  DY+F++D ML   GNTA Y
Sbjct: 401  GKLIAE--RDNDLSEDELKEVAHKVGIGAVKYADLSKNRTTDYMFNWDSMLSFEGNTAPY 458

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            L YAYTR+ S+ R AG++     +A     +++  ++E ALA  L++  +V+  V+R+  
Sbjct: 459  LQYAYTRVKSLFRKAGVD-----MATMPVDINIAEKQEHALAVLLMQFEEVIGTVSREAT 513

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLYD+++AF  FY+ C  ++   +G    V   RL L+   AK +++   +L I
Sbjct: 514  PHVLCTYLYDVASAFMSFYEACPMLK---DGIEPAVRDSRLALSALVAKTLEQGLTLLGI 570

Query: 1067 RT 1068
             T
Sbjct: 571  ET 572



 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/358 (41%), Positives = 214/358 (59%), Gaps = 27/358 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++   L + FT A+Q    E+G + A V  +      +FG++Q N AMAL K  K K  
Sbjct: 1   MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P DIA+ I   V         L  +  K+EVA PGF+NV L+  +   Q +  + + 
Sbjct: 54  ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLNDEWLSNQCELSLTDP 102

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                 +K+  ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+GDWG
Sbjct: 103 RLGIAKSKEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHMGDWG 162

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGML+AHL DK  D + ++  ++DL+ FY+E+K RFDE+E F  RA + VV LQ  D 
Sbjct: 163 TQFGMLLAHLSDKLQDEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQGGDA 221

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
                WE   DVS    +++YD+LNV+LT +   GES Y   +  ++  L+ KGL   D 
Sbjct: 222 QCLALWEKFIDVSIAHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKAKGLAVEDQ 281

Query: 382 GRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
           G ++++     +  G+  + IV KS GG+ Y T+DLAA+R R  +  AD  + +TD R
Sbjct: 282 GAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTDAR 339



 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/358 (41%), Positives = 214/358 (59%), Gaps = 27/358 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++   L + FT A+Q    E+G + A V  +      +FG++Q N AMAL K  K K  
Sbjct: 1    MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P DIA+ I   V         L  +  K+EVA PGF+NV L+  +   Q +  + + 
Sbjct: 54   ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLNDEWLSNQCELSLTDP 102

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                  +K+  ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+GDWG
Sbjct: 103  RLGIAKSKEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHMGDWG 162

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGML+AHL DK  D + ++  ++DL+ FY+E+K RFDE+E F  RA + VV LQ  D 
Sbjct: 163  TQFGMLLAHLSDKLQDEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQGGDA 221

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
                 WE   DVS    +++YD+LNV+LT +   GES Y   +  ++  L+ KGL   D 
Sbjct: 222  QCLALWEKFIDVSIAHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKAKGLAVEDQ 281

Query: 1399 GRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            G ++++     +  G+  + IV KS GG+ Y T+DLAA+R R  +  AD  + +TD R
Sbjct: 282  GAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTDAR 339


>gi|407699345|ref|YP_006824132.1| arginyl-tRNA ligase [Alteromonas macleodii str. 'Black Sea 11']
 gi|407248492|gb|AFT77677.1| arginyl-tRNA ligase [Alteromonas macleodii str. 'Black Sea 11']
          Length = 576

 Score =  411 bits (1057), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 242/602 (40%), Positives = 356/602 (59%), Gaps = 38/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++   L + FT A+Q    E+G + A V  +      +FG++Q N AMAL K  K K  
Sbjct: 1    MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P DIA+ I   V         L  +  K+EVA PGF+NV LS  +   Q +  + + 
Sbjct: 54   ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLSDEWLSNQCELSLTDP 102

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                  +K+  ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+GDWG
Sbjct: 103  RLGIAKSKEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHMGDWG 162

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGML+AHL DK  + + ++  ++DL+ FY+E+K RFDE+E F  RA + VV LQ  D 
Sbjct: 163  TQFGMLLAHLSDKLQEEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQGGDA 221

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
                 WE   DVS    +++YD+LNV+LT +   GES Y   +  ++  L+ KGL   D 
Sbjct: 222  QCLALWEKFIDVSIAHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKAKGLAVEDQ 281

Query: 772  GRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G ++++     +  G+  + IV KS GG+ Y T+DLAA+R R  +  AD  + +TD  Q 
Sbjct: 282  GAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTDARQA 341

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
            +HF+  E   +KAG +   +T  +   FG++LG D K FKTR+G TVKL ELLDE + R+
Sbjct: 342  LHFKQTEIVGRKAGFMKEEQT-YEHCPFGMMLGSDGKPFKTRTGGTVKLVELLDEAVERA 400

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               + +  R  +L+  EL E    V  G +KYADLS NR  DY+F++D ML   GNTA Y
Sbjct: 401  GKLIAE--RDNDLSEDELKEVAHKVGIGAVKYADLSKNRTTDYMFNWDSMLSFEGNTAPY 458

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            L YAYTR+ S+ R AG++     +A     +++  ++E ALA  L++  +V+  V+R+  
Sbjct: 459  LQYAYTRVKSLFRKAGVD-----MATMPVDINIAEKQEHALAVLLMQFEEVIGTVSREAT 513

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLYD+++AF  FY+ C  ++   +G    V   RL L+   AK +++   +L I
Sbjct: 514  PHVLCTYLYDVASAFMSFYEACPMLK---DGIEPAVRDSRLALSALVAKTLEQGLTLLGI 570

Query: 1067 RT 1068
             T
Sbjct: 571  ET 572



 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 147/358 (41%), Positives = 214/358 (59%), Gaps = 27/358 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++   L + FT A+Q    E+G + A V  +      +FG++Q N AMAL K  K K  
Sbjct: 1   MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P DIA+ I   V         L  +  K+EVA PGF+NV LS  +   Q +  + + 
Sbjct: 54  ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLSDEWLSNQCELSLTDP 102

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                 +K+  ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+GDWG
Sbjct: 103 RLGIAKSKEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHMGDWG 162

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGML+AHL DK  + + ++  ++DL+ FY+E+K RFDE+E F  RA + VV LQ  D 
Sbjct: 163 TQFGMLLAHLSDKLQEEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQGGDA 221

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
                WE   DVS    +++YD+LNV+LT +   GES Y   +  ++  L+ KGL   D 
Sbjct: 222 QCLALWEKFIDVSIAHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKAKGLAVEDQ 281

Query: 382 GRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
           G ++++     +  G+  + IV KS GG+ Y T+DLAA+R R  +  AD  + +TD R
Sbjct: 282 GAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTDAR 339



 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 147/358 (41%), Positives = 214/358 (59%), Gaps = 27/358 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++   L + FT A+Q    E+G + A V  +      +FG++Q N AMAL K  K K  
Sbjct: 1    MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P DIA+ I   V         L  +  K+EVA PGF+NV LS  +   Q +  + + 
Sbjct: 54   ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLSDEWLSNQCELSLTDP 102

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                  +K+  ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+GDWG
Sbjct: 103  RLGIAKSKEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHMGDWG 162

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGML+AHL DK  + + ++  ++DL+ FY+E+K RFDE+E F  RA + VV LQ  D 
Sbjct: 163  TQFGMLLAHLSDKLQEEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQGGDA 221

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
                 WE   DVS    +++YD+LNV+LT +   GES Y   +  ++  L+ KGL   D 
Sbjct: 222  QCLALWEKFIDVSIAHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKAKGLAVEDQ 281

Query: 1399 GRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            G ++++     +  G+  + IV KS GG+ Y T+DLAA+R R  +  AD  + +TD R
Sbjct: 282  GAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTDAR 339


>gi|240948908|ref|ZP_04753264.1| arginyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296723|gb|EER47334.1| arginyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 575

 Score =  411 bits (1057), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 242/567 (42%), Positives = 344/567 (60%), Gaps = 41/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N +L  ++DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NANLDGIVDKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL++ +  E     +  VN G+Q  T N +  ++VD+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNKAWLAENANQALQAVNFGIQ--TANPQ-TIVVDYSSPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +D DE F ++A   VV LQ  D   +  W+ + D++ R  Q+ YDRLNVTLTE+   G
Sbjct: 198  EHYDSDEAFAEKARNYVVKLQSGDEYCRTMWKKLVDITMRHNQENYDRLNVTLTEKDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   + ++V  L+ KGL   D+G  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDEGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +AA + R E  KAD  +  +D  Q  H +      +KAG + P+   ++   FG++LG+D
Sbjct: 318  VAAAKYRYETLKADRALVFSDSRQAQHMQQAWLITRKAGYV-PDSFSLEHPFFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL +LLDE + R+ DKL    R T+LT  E +   +AVA G +KY+DL
Sbjct: 377  GKPFKTRSGGTVKLKDLLDEAVERA-DKLISA-RSTDLTAEEKAAVVEAVAIGSVKYSDL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTRI SI   AGI++ +L     +  + L  
Sbjct: 435  SKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFARAGIDANNL-----TGNILLTE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE ALA  LL+  + L  V ++   H LC+YLY+++  FS FY+ C  +  +     + 
Sbjct: 490  DKERALAVKLLQFEEALNGVAKEGMPHILCQYLYELAGTFSSFYEACPILNAE-----EA 544

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K+  D+L I+T
Sbjct: 545  VKNSRLRLAALTAKTLKQGLDLLGIKT 571



 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 141/331 (42%), Positives = 203/331 (61%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N +L  ++DK+E+A PG
Sbjct: 35  EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NANLDGIVDKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL++ +  E     +  VN G+Q  T N +  ++VD+SSPN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLNKAWLAENANQALQAVNFGIQ--TANPQ-TIVVDYSSPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139 GDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +D DE F ++A   VV LQ  D   +  W+ + D++ R  Q+ YDRLNVTLTE+   G
Sbjct: 198 EHYDSDEAFAEKARNYVVKLQSGDEYCRTMWKKLVDITMRHNQENYDRLNVTLTEKDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   + ++V  L+ KGL   D+G  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258 ESLYNPMLPEIVADLKAKGLAVEDEGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +AA + R E  KAD  +  +D R    + QA
Sbjct: 318 VAAAKYRYETLKADRALVFSDSRQAQHMQQA 348



 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/330 (42%), Positives = 202/330 (61%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N +L  ++DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NANLDGIVDKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL++ +  E     +  VN G+Q  T N +  ++VD+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNKAWLAENANQALQAVNFGIQ--TANPQ-TIVVDYSSPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +D DE F ++A   VV LQ  D   +  W+ + D++ R  Q+ YDRLNVTLTE+   G
Sbjct: 198  EHYDSDEAFAEKARNYVVKLQSGDEYCRTMWKKLVDITMRHNQENYDRLNVTLTEKDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   + ++V  L+ KGL   D+G  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDEGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +AA + R E  KAD  +  +D R    + Q
Sbjct: 318  VAAAKYRYETLKADRALVFSDSRQAQHMQQ 347


>gi|417842785|ref|ZP_12488865.1| Arginyl-tRNA synthetase [Haemophilus haemolyticus M21127]
 gi|341950946|gb|EGT77527.1| Arginyl-tRNA synthetase [Haemophilus haemolyticus M21127]
          Length = 577

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 244/605 (40%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTSEVSTALSQK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQYNYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++LE +KE ALA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTLEDDKERALAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    +V   RL LA  T K +K+  ++
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SVKLSRLKLALLTEKTLKQGLEL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 158/441 (35%), Positives = 242/441 (54%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTSEVSTALSQK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQYNYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280 EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  249 bits (636), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 145/368 (39%), Positives = 213/368 (57%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTSEVSTALSQK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQYNYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|421263284|ref|ZP_15714341.1| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
            P52VAC]
 gi|401689794|gb|EJS85171.1| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
            P52VAC]
          Length = 577

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 354/600 (59%), Gaps = 41/600 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 596
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 657  FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 716
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 717  KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 773
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RIMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 774  KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q  H
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
             +      +KAG + P+  +++   FG++LG+D K FKTR+G TVKL++LLDE + R+  
Sbjct: 345  MQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQ 403

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             +++K+  T L+  E +   +AVA G +KYADLS NR  DYVF +D ML   GNTA Y+ 
Sbjct: 404  LIQEKS--TALSAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPYMQ 461

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YAYTRI SI   + +N +DL      +PV L +EKE  LA  LL+  + + +V ++   H
Sbjct: 462  YAYTRIRSIFNRSELNEQDL----SESPVVLSNEKERLLAIKLLQFEEAIQIVAKEGIPH 517

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             LC YLY+++  FS FY++C  +  + E     +   RL LA  T K +K+  D+L I+T
Sbjct: 518  VLCTYLYELAGVFSSFYEHCPILNNEDE----QIKRSRLKLALLTEKTLKQGLDLLGIKT 573



 Score =  246 bits (629), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 153/430 (35%), Positives = 236/430 (54%), Gaps = 33/430 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3   IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 206
            AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58  FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
                    V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109 ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 267 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 326
           FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166 FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 327 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 383
           +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225 RIMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 384 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
            +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285 FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 439 VLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVAFPE 495
           + QA     K   +  S   + K     +     P + R      L+D+   AV+ A   
Sbjct: 345 MQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQL 404

Query: 496 LGDKTASVAS 505
           + +K+ ++++
Sbjct: 405 IQEKSTALSA 414



 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 210/363 (57%), Gaps = 30/363 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 1223
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 1284 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 1343
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 1344 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 1400
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RIMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 1401 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 1455
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 1456 VLQ 1458
            + Q
Sbjct: 345  MQQ 347


>gi|425063240|ref|ZP_18466365.1| Arginyl-tRNA synthetase [Pasteurella multocida subsp. gallicida X73]
 gi|404382803|gb|EJZ79260.1| Arginyl-tRNA synthetase [Pasteurella multocida subsp. gallicida X73]
          Length = 577

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 353/600 (58%), Gaps = 41/600 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 596
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 657  FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 716
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 717  KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 773
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 774  KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q  H
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
             +      +KAG + P+  +++   FG++LG+D K FKTR+G TVKL++LLDE + R+  
Sbjct: 345  MQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQ 403

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             +++K+  T L+  E +   +AVA G +KYADLS NR  DYVF +D ML   GNTA Y+ 
Sbjct: 404  LIQEKS--TALSAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPYMQ 461

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YAYTRI SI   + +N +DL      +PV L +EKE  LA  LL+  + + +V ++   H
Sbjct: 462  YAYTRIRSIFNRSELNEQDL----SESPVVLSNEKERLLAIKLLQFEEAIQIVAKEGTPH 517

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             LC YLY+++  FS FY+ C  +  + E     +   RL LA  T K +K+  D+L I+T
Sbjct: 518  VLCTYLYELAGVFSSFYEYCPILNNEDE----QIKRSRLKLALLTEKTLKQGLDLLGIKT 573



 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 153/430 (35%), Positives = 236/430 (54%), Gaps = 33/430 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3   IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 206
            AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58  FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
                    V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109 ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 267 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 326
           FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166 FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 327 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 383
           +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225 RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 384 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
            +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285 FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 439 VLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVAFPE 495
           + QA     K   +  S   + K     +     P + R      L+D+   AV+ A   
Sbjct: 345 MQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQL 404

Query: 496 LGDKTASVAS 505
           + +K+ ++++
Sbjct: 405 IQEKSTALSA 414



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 210/363 (57%), Gaps = 30/363 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 1223
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 1284 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 1343
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 1344 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 1400
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 1401 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 1455
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 1456 VLQ 1458
            + Q
Sbjct: 345  MQQ 347


>gi|417842091|ref|ZP_12488186.1| Arginyl-tRNA synthetase [Haemophilus haemolyticus M19501]
 gi|341947871|gb|EGT74512.1| Arginyl-tRNA synthetase [Haemophilus haemolyticus M19501]
          Length = 577

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 243/605 (40%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSQK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DED++F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELHDLEAFYREAKKHYDEDKVFAEKARNYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++LE +KE ALA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTLEEDKERALAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    +V   RL LA  T K +K+  ++
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SVKLSRLKLALLTEKTLKQGLEL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  252 bits (644), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 157/441 (35%), Positives = 242/441 (54%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSQK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DED++F ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELHDLEAFYREAKKHYDEDKVFAEKARNYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280 EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 213/368 (57%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSQK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DED++F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELHDLEAFYREAKKHYDEDKVFAEKARNYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|417853169|ref|ZP_12498591.1| arginyl-tRNA synthetase [Pasteurella multocida subsp. gallicida str.
            Anand1_poultry]
 gi|338215452|gb|EGP01729.1| arginyl-tRNA synthetase [Pasteurella multocida subsp. gallicida str.
            Anand1_poultry]
          Length = 577

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/600 (39%), Positives = 353/600 (58%), Gaps = 41/600 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 596
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 657  FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 716
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 717  KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 773
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 774  KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q  H
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
             +      +KAG + P+  +++   FG++LG+D K FKTR+G TVKL++LL+E + R+  
Sbjct: 345  MQQAWLITRKAGYV-PDSFQLEHKNFGMILGKDGKPFKTRTGGTVKLADLLNEAVERATQ 403

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             +++K+  T L+  E +   +AVA G +KYADLS NR  DYVF +D ML   GNTA Y+ 
Sbjct: 404  LIQEKS--TALSAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPYMQ 461

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YAYTRI SI   + +N  DL      +PV L +EKE  LA  LL+  + + +V ++   H
Sbjct: 462  YAYTRIRSIFNRSELNELDL----SESPVVLSNEKERLLAIKLLQFEEAIQIVAKEGTPH 517

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             LC YLY+++  FS FY++C  +  + E     +   RL LA  T K +K+  D+L I+T
Sbjct: 518  VLCTYLYELAGVFSSFYEHCPILNNEDE----QIKRSRLKLALLTEKTLKQGLDLLGIKT 573



 Score =  248 bits (634), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/430 (35%), Positives = 236/430 (54%), Gaps = 33/430 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3   IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 206
            AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58  FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
                    V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109 ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 267 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 326
           FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166 FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 327 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 383
           +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225 RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 384 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
            +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285 FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 439 VLQAIAEEEKKQGISSSSSSQTKGTA---KKMNVPVRDRMSVRDYLSDVFTHAVQVAFPE 495
           + QA     K   +  S   + K       K   P + R      L+D+   AV+ A   
Sbjct: 345 MQQAWLITRKAGYVPDSFQLEHKNFGMILGKDGKPFKTRTGGTVKLADLLNEAVERATQL 404

Query: 496 LGDKTASVAS 505
           + +K+ ++++
Sbjct: 405 IQEKSTALSA 414



 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 210/363 (57%), Gaps = 30/363 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  + +H +Q A    G  T S A   +    +FGD+Q N  MA  K        +NP +
Sbjct: 3    IQSILSHKIQQAMIASGADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPRE 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQ 1223
             AQ +   +         L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q
Sbjct: 58   FAQQVIEQL--------DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQ 108

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
                     V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQ
Sbjct: 109  ATETQT---VVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQ 165

Query: 1284 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 1343
            FGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   
Sbjct: 166  FGMLIAYLE-KVENESASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYC 224

Query: 1344 KKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGR 1400
            +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G 
Sbjct: 225  RTMWKKLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGA 284

Query: 1401 KIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 1455
             +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    
Sbjct: 285  FVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQH 344

Query: 1456 VLQ 1458
            + Q
Sbjct: 345  MQQ 347


>gi|342904392|ref|ZP_08726193.1| Arginyl-tRNA synthetase [Haemophilus haemolyticus M21621]
 gi|341953632|gb|EGT80136.1| Arginyl-tRNA synthetase [Haemophilus haemolyticus M21621]
          Length = 577

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/602 (40%), Positives = 350/602 (58%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTSEVSTALSQK 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                    K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGIKATDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQGGDE 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
              +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL   DD
Sbjct: 223  YCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAVEDD 282

Query: 772  GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q 
Sbjct: 283  GALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE + R+
Sbjct: 343  QHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNTA Y
Sbjct: 402  TVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTRI SI     INS  L  A+    ++LE +KE ALA  LL+  + +  V ++  
Sbjct: 460  MQYAYTRIRSIFNKTDINSTALLAAS----LTLEDDKERALAIKLLQFEEAVQTVGKEGT 515

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLY+++  FS FY++C  +  + E    +V   RL LA  T K +K+  ++L I
Sbjct: 516  PHVLCAYLYELAGIFSSFYEHCPILNAEDE----SVKLSRLKLALLTEKTLKQGLELLGI 571

Query: 1067 RT 1068
            +T
Sbjct: 572  KT 573



 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 156/438 (35%), Positives = 239/438 (54%), Gaps = 29/438 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTSEVSTALSQK 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                   K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104 NLGIKATDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ  D 
Sbjct: 164 TQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQGGDE 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
             +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL   DD
Sbjct: 223 YCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAVEDD 282

Query: 382 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283 GALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 437 HQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVAF 493
             + QA     K   +  S S + K     +     P + R      L+D+   A++ A 
Sbjct: 343 QHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERAT 402

Query: 494 PELGDKTASVASTNEKYV 511
             + +K  ++++  ++ V
Sbjct: 403 VLINEKNTNLSNDEKEAV 420



 Score =  250 bits (639), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 143/365 (39%), Positives = 210/365 (57%), Gaps = 26/365 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTSEVSTALSQK 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                    K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGIKATDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQGGDE 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
              +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL   DD
Sbjct: 223  YCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAVEDD 282

Query: 1399 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283  GALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 1454 HQVLQ 1458
              + Q
Sbjct: 343  QHMQQ 347


>gi|417845459|ref|ZP_12491487.1| Arginyl-tRNA synthetase [Haemophilus haemolyticus M21639]
 gi|341955029|gb|EGT81494.1| Arginyl-tRNA synthetase [Haemophilus haemolyticus M21639]
          Length = 577

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 243/605 (40%), Positives = 351/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSQK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH ++R NHVG
Sbjct: 104  NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHHIIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIIQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAMKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P +LE +KE ALA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PFTLEDDKERALAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    +V   RL LA  T K +K+  ++
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SVKLSRLKLALLTEKTLKQGLEL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  253 bits (645), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 157/441 (35%), Positives = 241/441 (54%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSQK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH ++R NHVG
Sbjct: 104 NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHHIIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280 EDDGALVVYLDEFKNKEGDPMGVIIQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 212/368 (57%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   ++   +   
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEVSTALSQK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH ++R NHVG
Sbjct: 104  NLGIQA---TDKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHHIIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIIQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|385871600|gb|AFI90120.1| Arginyl-tRNA synthetase [Pectobacterium sp. SCC3193]
          Length = 576

 Score =  408 bits (1049), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/611 (39%), Positives = 348/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGHDV+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHDVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNNMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  + DKN   E    EL+   + V+ G IKYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAYNRALKLIADKNPQME--SDELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + AGI  + L     + P++L  E+EFALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVASIFKRAGIQEDTL-----TQPITLSDEREFALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  + +     V   RL LA  TAK +
Sbjct: 506  ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAETD----DVRQSRLRLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I T
Sbjct: 562  KQGLDTLGIET 572



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 211/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53  -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGHDV+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHDVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNNMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 210/374 (56%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGHDV+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHDVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNNMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|403058253|ref|YP_006646470.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
            carotovorum PCC21]
 gi|402805579|gb|AFR03217.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
            carotovorum PCC21]
          Length = 576

 Score =  408 bits (1048), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/611 (39%), Positives = 350/611 (57%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDASARTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESASEMDLSDLEAFYREAKKHYDEDADFAERARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  + +KN   E    EL+   + V+ G IKYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAYDRALKLIAEKNPQME--SDELTTLAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + AGI  + L     + P++L  E+EFALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVASIFKRAGIQEDSL-----TQPITLSDEREFALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  +++     V   RL LA  TAK +
Sbjct: 506  ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAESD----NVRQSRLRLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I T
Sbjct: 562  KQGLDTLGIET 572



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 212/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53  -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDASARTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESASEMDLSDLEAFYREAKKHYDEDADFAERARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 211/374 (56%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDASARTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESASEMDLSDLEAFYREAKKHYDEDADFAERARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|223042112|ref|ZP_03612285.1| arginyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017100|gb|EEF15539.1| arginyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 575

 Score =  408 bits (1048), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/567 (42%), Positives = 343/567 (60%), Gaps = 41/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N +L  ++DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NANLDGIVDKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL++ +  E     +  VN G+Q  T N +  ++VD+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNKAWLAENANQALQAVNFGIQ--TANPQ-TIVVDYSSPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +D DE F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   G
Sbjct: 198  EHYDSDEAFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   + ++V  L+ KGL   D+G  +++ +   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDEGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +AA + R E  KAD  +  +D  Q  H +      +KAG + P+   ++   FG++LG+D
Sbjct: 318  VAAAKYRYETLKADRALVFSDSRQAQHMQQAWLITRKAGYV-PDSFSLEHPFFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL +LLDE + R+ DKL    R T+LT  E +   +AVA G +KY+DL
Sbjct: 377  GKPFKTRSGGTVKLKDLLDEAVERA-DKLISA-RSTDLTAEEKAAVVEAVAIGSVKYSDL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTRI SI   AGI++ +L     +  + L  
Sbjct: 435  SKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFARAGIDANEL-----TGEIHLTE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE ALA  LL+  + L  V ++   H LC+YLY+++  FS FY+ C  +  +     + 
Sbjct: 490  DKERALAVKLLQFEEALNGVAKEGMPHILCQYLYELAGTFSSFYEACPILNAE-----EA 544

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K+  D+L I+T
Sbjct: 545  VKNSRLRLAALTAKTLKQGLDLLGIKT 571



 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 202/331 (61%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N +L  ++DK+E+A PG
Sbjct: 35  EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NANLDGIVDKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL++ +  E     +  VN G+Q  T N +  ++VD+SSPN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLNKAWLAENANQALQAVNFGIQ--TANPQ-TIVVDYSSPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139 GDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +D DE F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   G
Sbjct: 198 EHYDSDEAFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   + ++V  L+ KGL   D+G  +++ +   ++   PM ++  K DGGF Y T+D
Sbjct: 258 ESLYNPMLPEIVADLKAKGLAVEDEGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +AA + R E  KAD  +  +D R    + QA
Sbjct: 318 VAAAKYRYETLKADRALVFSDSRQAQHMQQA 348



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 201/330 (60%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N +L  ++DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NANLDGIVDKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL++ +  E     +  VN G+Q  T N +  ++VD+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNKAWLAENANQALQAVNFGIQ--TANPQ-TIVVDYSSPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +D DE F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   G
Sbjct: 198  EHYDSDEAFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   + ++V  L+ KGL   D+G  +++ +   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDEGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +AA + R E  KAD  +  +D R    + Q
Sbjct: 318  VAAAKYRYETLKADRALVFSDSRQAQHMQQ 347


>gi|148826102|ref|YP_001290855.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229847101|ref|ZP_04467206.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166232791|sp|A5UCH1.1|SYR_HAEIE RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|148716262|gb|ABQ98472.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229809930|gb|EEP45651.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 577

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 241/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMVIA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +A+  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKQAVIEAIGIGSVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTEINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E     V   RL LA  T K +K+  ++
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDEA----VKLSRLKLALLTEKTLKQGLEL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  256 bits (654), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 159/441 (36%), Positives = 244/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMVIA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKQAV 420



 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/368 (39%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMVIA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|261821364|ref|YP_003259470.1| arginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605377|gb|ACX87863.1| arginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 576

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/611 (39%), Positives = 348/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGHDV+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHDVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNNMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  + DKN   E    EL+   + V+ G IKYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAYDRALKLIADKNPQME--SDELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + AGI  + L     + P++L  E+EFALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVASIFKRAGIQEDTL-----TQPITLSDEREFALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  + +     V   RL LA  TAK +
Sbjct: 506  ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAETD----DVRQSRLRLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I T
Sbjct: 562  KQGLDTLGIET 572



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 211/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53  -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGHDV+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHDVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNNMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 210/374 (56%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGHDV+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHDVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNNMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|145637830|ref|ZP_01793478.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145268973|gb|EDK08928.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 577

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 241/605 (39%), Positives = 352/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GSDQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K          + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQHEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  256 bits (653), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 159/441 (36%), Positives = 243/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GSDQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K          + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQHEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 EDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/368 (39%), Positives = 214/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GSDQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K          + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQHEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  EDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|227329329|ref|ZP_03833353.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
            carotovorum WPP14]
          Length = 576

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/611 (39%), Positives = 350/611 (57%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDASARTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESASEMDLSDLEAFYREAKKHYDEDADFAERARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  + +KN   E    EL+   + V+ G IKYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAYDRALKLIAEKNPQME--SDELTALAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + AGI  + L     + P++L  E+EFALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVASIFKRAGIQEDSL-----TQPITLNDEREFALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  +++     V   RL LA  TAK +
Sbjct: 506  ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAESD----DVRQSRLRLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I T
Sbjct: 562  KQGLDTLGIET 572



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 212/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53  -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDASARTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESASEMDLSDLEAFYREAKKHYDEDADFAERARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 211/374 (56%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDASARTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESASEMDLSDLEAFYREAKKHYDEDADFAERARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|399217836|emb|CCF74723.1| unnamed protein product [Babesia microti strain RI]
          Length = 576

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/591 (37%), Positives = 354/591 (59%), Gaps = 25/591 (4%)

Query: 477  VRDYLSDVFTHAVQVAFPELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
            +++++ +VF+ A+  AFP +  + + +++  N      FGD+Q N AM + K  KD+ + 
Sbjct: 4    LQNHIKEVFSKAIAKAFPTIAYEHSPNISKANPS----FGDYQWNGAMDIFKQCKDELKL 59

Query: 536  KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
            ++   + + ++  ++ ++       +VI   +    GFV + LS  +  E++K +I NGV
Sbjct: 60   ESVSQVTELVSKHLSRDM-----FEEVIPAKDANNLGFVTMKLSSKWVSEELKTLIRNGV 114

Query: 596  QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
            +    N   ++LVDFSSPNIAK+MHVGHLRSTI+G++I R+ E+LG++V+R+NH+GDWGT
Sbjct: 115  KIEWKNDTYKILVDFSSPNIAKDMHVGHLRSTILGESICRVFEFLGYNVLRINHIGDWGT 174

Query: 656  QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
             FGM I +L+ + P+Y+   P I+DL +FYK++++  D DE FKK A   VV LQ  +  
Sbjct: 175  NFGMYIEYLKREHPNYIENFPAISDLTSFYKKARQLMDTDEDFKKCARANVVKLQEREKV 234

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
              KAWE+IC++S+ + +K+YD L++TL + GES+Y   +  ++  L  KG+ +   G   
Sbjct: 235  SVKAWEIICEISKAEIKKLYDILDITLEDYGESYYVDMIPGVIDELTAKGICKESSGAMC 294

Query: 776  MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
            ++  +    P+ + KSDGG+ YD++D+A IR RI       ++YVTD GQ  HF LL E 
Sbjct: 295  VF-TNIDKTPLILRKSDGGYGYDSTDMACIRHRIITLGCKRLIYVTDSGQRSHFDLLFEA 353

Query: 836  AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
            A+ AG    +   +D VGFG++  ED KKFK+RSG+ V+L  L+DE + RS  +LK +  
Sbjct: 354  ARIAG-WATDDIVLDHVGFGLIQNEDGKKFKSRSGEPVRLMSLIDEAIERSKTELKMRGA 412

Query: 896  HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIA 955
            H +     +  A + +    I+Y DL  N N +Y FS+DKML+ +GNTA+Y+LY Y RI 
Sbjct: 413  HDD---AYIKYASKVLGCASIRYFDLKQNYNTNYKFSYDKMLNPKGNTAIYILYGYARIC 469

Query: 956  SIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLY 1015
            SI + + +   ++        ++L H KE  L K LL   DV+   T+DL +  + +Y Y
Sbjct: 470  SIFKKSTL---EVDFMNDCDKINLVHPKELTLGKHLLYFPDVISFTTQDLLISRIADYTY 526

Query: 1016 DISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +++  F+ FY+ C  +  D E         RLLL +AT  ++  C  +L I
Sbjct: 527  NLTEIFTSFYNECKVVGGDEE-------VSRLLLCKATKSILDMCLYMLGI 570



 Score =  254 bits (649), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 134/357 (37%), Positives = 224/357 (62%), Gaps = 13/357 (3%)

Query: 87  VRDYLSDVFTHAVQVAFPELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           +++++ +VF+ A+  AFP +  + + +++  N      FGD+Q N AM + K  KD+ + 
Sbjct: 4   LQNHIKEVFSKAIAKAFPTIAYEHSPNISKANPS----FGDYQWNGAMDIFKQCKDELKL 59

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
           ++   + + ++  ++ ++       +VI   +    GFV + LS  +  E++K +I NGV
Sbjct: 60  ESVSQVTELVSKHLSRDM-----FEEVIPAKDANNLGFVTMKLSSKWVSEELKTLIRNGV 114

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
           +    N   ++LVDFSSPNIAK+MHVGHLRSTI+G++I R+ E+LG++V+R+NH+GDWGT
Sbjct: 115 KIEWKNDTYKILVDFSSPNIAKDMHVGHLRSTILGESICRVFEFLGYNVLRINHIGDWGT 174

Query: 266 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 325
            FGM I +L+ + P+Y+   P I+DL +FYK++++  D DE FKK A   VV LQ  +  
Sbjct: 175 NFGMYIEYLKREHPNYIENFPAISDLTSFYKKARQLMDTDEDFKKCARANVVKLQEREKV 234

Query: 326 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
             KAWE+IC++S+ + +K+YD L++TL + GES+Y   +  ++  L  KG+ +   G   
Sbjct: 235 SVKAWEIICEISKAEIKKLYDILDITLEDYGESYYVDMIPGVIDELTAKGICKESSGAMC 294

Query: 386 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVL 440
           ++  +    P+ + KSDGG+ YD++D+A IR RI       ++YVTD   RS+  +L
Sbjct: 295 VF-TNIDKTPLILRKSDGGYGYDSTDMACIRHRIITLGCKRLIYVTDSGQRSHFDLL 350



 Score =  254 bits (649), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 134/357 (37%), Positives = 224/357 (62%), Gaps = 13/357 (3%)

Query: 1104 VRDYLSDVFTHAVQVAFPELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            +++++ +VF+ A+  AFP +  + + +++  N      FGD+Q N AM + K  KD+ + 
Sbjct: 4    LQNHIKEVFSKAIAKAFPTIAYEHSPNISKANPS----FGDYQWNGAMDIFKQCKDELKL 59

Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
            ++   + + ++  ++ ++       +VI   +    GFV + LS  +  E++K +I NGV
Sbjct: 60   ESVSQVTELVSKHLSRDM-----FEEVIPAKDANNLGFVTMKLSSKWVSEELKTLIRNGV 114

Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
            +    N   ++LVDFSSPNIAK+MHVGHLRSTI+G++I R+ E+LG++V+R+NH+GDWGT
Sbjct: 115  KIEWKNDTYKILVDFSSPNIAKDMHVGHLRSTILGESICRVFEFLGYNVLRINHIGDWGT 174

Query: 1283 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
             FGM I +L+ + P+Y+   P I+DL +FYK++++  D DE FKK A   VV LQ  +  
Sbjct: 175  NFGMYIEYLKREHPNYIENFPAISDLTSFYKKARQLMDTDEDFKKCARANVVKLQEREKV 234

Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
              KAWE+IC++S+ + +K+YD L++TL + GES+Y   +  ++  L  KG+ +   G   
Sbjct: 235  SVKAWEIICEISKAEIKKLYDILDITLEDYGESYYVDMIPGVIDELTAKGICKESSGAMC 294

Query: 1403 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVL 1457
            ++  +    P+ + KSDGG+ YD++D+A IR RI       ++YVTD   RS+  +L
Sbjct: 295  VF-TNIDKTPLILRKSDGGYGYDSTDMACIRHRIITLGCKRLIYVTDSGQRSHFDLL 350


>gi|271500744|ref|YP_003333769.1| arginyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344299|gb|ACZ77064.1| arginyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 576

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 244/611 (39%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+    A+  A    G    S A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQALLSEKVHQAMIAA----GAPADSEAMVRQSAKAQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ + + +         L  +  K E+A PGF+N+FL   +   Q++  +   
Sbjct: 53   -MPPRQLAEKVVNTL--------QLDGIAAKTEIAGPGFINIFLDSQWLSAQLEHALAAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V+ V+P T      ++VD+S+PN+AKEMHVG+LRSTIIGD   R LE+LGH V+R N
Sbjct: 104  KLGVSPVEPQT------IVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHHVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIAHL+D   D  T+   +ADL+AFY+E+KK++D+DE+F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAHLEDVQNDS-TQDLELADLEAFYREAKKQYDDDEVFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W  + D++    Q+ YDRLNV+LT     GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRSMWRKLVDITMVQNQRSYDRLNVSLTPENVMGESLYNAMLPDIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L E  +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A+ +
Sbjct: 277  LAEESEGAIVVYLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYEKLGANRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWSIVRKAGYV-PESVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  +  KN   E+  TEL +  Q V+ G +KYADLS NR  DY+F +D ML
Sbjct: 393  LLDEAYERALTLIAGKN--PEMERTELEQLAQVVSIGAVKYADLSKNRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR++SI + AG+    L     + P+ L  E E ALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVSSIFKRAGVEESSL-----TQPIVLTAEHEQALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V RD   H +C YLYD++  FS FY+NC  +  D +    +    RL LA  TAK +
Sbjct: 506  VTTVARDGTPHVMCAYLYDLAGLFSGFYENCPILNADND----STRQSRLKLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K   D L I+T
Sbjct: 562  KTGLDTLGIQT 572



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 144/375 (38%), Positives = 210/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+    A+  A    G    S A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQALLSEKVHQAMIAA----GAPADSEAMVRQSAKAQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ + + +         L  +  K E+A PGF+N+FL   +   Q++  +   
Sbjct: 53  -MPPRQLAEKVVNTL--------QLDGIAAKTEIAGPGFINIFLDSQWLSAQLEHALAAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V+ V+P T      ++VD+S+PN+AKEMHVG+LRSTIIGD   R LE+LGH V+R N
Sbjct: 104 KLGVSPVEPQT------IVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHHVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIAHL+D   D  T+   +ADL+AFY+E+KK++D+DE+F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAHLEDVQNDS-TQDLELADLEAFYREAKKQYDDDEVFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W  + D++    Q+ YDRLNV+LT     GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRSMWRKLVDITMVQNQRSYDRLNVSLTPENVMGESLYNAMLPDIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L E  +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A+ +
Sbjct: 277 LAEESEGAIVVYLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYEKLGANRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/374 (38%), Positives = 209/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+    A+  A    G    S A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQALLSEKVHQAMIAA----GAPADSEAMVRQSAKAQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ + + +         L  +  K E+A PGF+N+FL   +   Q++  +   
Sbjct: 53   -MPPRQLAEKVVNTL--------QLDGIAAKTEIAGPGFINIFLDSQWLSAQLEHALAAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V+ V+P T      ++VD+S+PN+AKEMHVG+LRSTIIGD   R LE+LGH V+R N
Sbjct: 104  KLGVSPVEPQT------IVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHHVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIAHL+D   D  T+   +ADL+AFY+E+KK++D+DE+F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAHLEDVQNDS-TQDLELADLEAFYREAKKQYDDDEVFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W  + D++    Q+ YDRLNV+LT     GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRSMWRKLVDITMVQNQRSYDRLNVSLTPENVMGESLYNAMLPDIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L E  +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A+ +
Sbjct: 277  LAEESEGAIVVYLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYEKLGANRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|226701384|sp|B8CI29.1|SYR_SHEPW RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|212554851|gb|ACJ27305.1| Arginyl-tRNA synthetase [Shewanella piezotolerans WP3]
          Length = 581

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 237/565 (41%), Positives = 339/565 (60%), Gaps = 39/565 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K       +KNP +IAQ I          N   +  ++K+E+A PGF+
Sbjct: 41   GDFATNLAMMLTK-----AARKNPREIAQLIID--------NLPQSSHVEKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F+       Q+ D + +     TL +   V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDNALANQLMDALNSDHLGVTLPESQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 693
            R LE++GH+V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148  RSLEFMGHNVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQIELSDLENFYRAAKVRFD 207

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E E F  RA + VVALQ  D    K W    D+S     +IY+RL V+LT    RGES Y
Sbjct: 208  ESEDFANRARKLVVALQSGDEYCNKLWREFNDISLSHCHEIYERLGVSLTRQDVRGESSY 267

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 805
               +EQ+V  L+ +GLL   +G K+++ E+  +     +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268  NDDLEQVVADLDSQGLLSESNGAKVVFQEEFKNKEGEPLPVIIQKADGGYLYATSDMAAM 327

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDF--VGFGVVLGEDRK 863
            R R    KAD  +Y  DL Q +HF+ + + AK A  +   +  M F  +GFG + GED +
Sbjct: 328  RYRSNVLKADRALYFVDLRQALHFQQVFKLAKTAKFV---REEMSFEHMGFGTMNGEDGR 384

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSG  VKL +LL E   R+L+ ++ KN   ++   EL+E  + V    +KYADLS 
Sbjct: 385  PFKTRSGGVVKLIDLLKEADTRALELVRSKN--PDMDEAELAEIARVVGIASVKYADLSK 442

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DY+FSF++ML   GNTA YLLYAYTR+A I + A    +D+ ++     + LEHEK
Sbjct: 443  NRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA----QDVDLS--DAKIVLEHEK 496

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  L   L +  +V+  V      H LC YL++++ AFS FY+ C  +  D E + K+  
Sbjct: 497  EKDLGTKLAQFGEVMNRVVNKGQPHALCAYLFELAGAFSSFYEACPVLAADTEAQKKS-- 554

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RLLLA+ TAK +K+  ++L + T
Sbjct: 555  --RLLLAQLTAKTLKQGLNLLGLET 577



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 197/329 (59%), Gaps = 25/329 (7%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K       +KNP +IAQ I          N   +  ++K+E+A PGF+
Sbjct: 41  GDFATNLAMMLTK-----AARKNPREIAQLIID--------NLPQSSHVEKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F+       Q+ D + +     TL +   V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88  NFFIDDNALANQLMDALNSDHLGVTLPESQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 303
           R LE++GH+V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148 RSLEFMGHNVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQIELSDLENFYRAAKVRFD 207

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E E F  RA + VVALQ  D    K W    D+S     +IY+RL V+LT    RGES Y
Sbjct: 208 ESEDFANRARKLVVALQSGDEYCNKLWREFNDISLSHCHEIYERLGVSLTRQDVRGESSY 267

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 415
              +EQ+V  L+ +GLL   +G K+++ E+  +     +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268 NDDLEQVVADLDSQGLLSESNGAKVVFQEEFKNKEGEPLPVIIQKADGGYLYATSDMAAM 327

Query: 416 RQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           R R    KAD  +Y  D R    + QV +
Sbjct: 328 RYRSNVLKADRALYFVDLRQALHFQQVFK 356



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 197/329 (59%), Gaps = 25/329 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K       +KNP +IAQ I          N   +  ++K+E+A PGF+
Sbjct: 41   GDFATNLAMMLTK-----AARKNPREIAQLIID--------NLPQSSHVEKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F+       Q+ D + +     TL +   V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDNALANQLMDALNSDHLGVTLPESQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 1320
            R LE++GH+V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148  RSLEFMGHNVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQIELSDLENFYRAAKVRFD 207

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E E F  RA + VVALQ  D    K W    D+S     +IY+RL V+LT    RGES Y
Sbjct: 208  ESEDFANRARKLVVALQSGDEYCNKLWREFNDISLSHCHEIYERLGVSLTRQDVRGESSY 267

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 1432
               +EQ+V  L+ +GLL   +G K+++ E+  +     +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268  NDDLEQVVADLDSQGLLSESNGAKVVFQEEFKNKEGEPLPVIIQKADGGYLYATSDMAAM 327

Query: 1433 RQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            R R    KAD  +Y  D R    + QV +
Sbjct: 328  RYRSNVLKADRALYFVDLRQALHFQQVFK 356


>gi|253688194|ref|YP_003017384.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
            carotovorum PC1]
 gi|259511652|sp|C6DFD9.1|SYR_PECCP RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|251754772|gb|ACT12848.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
            carotovorum PC1]
          Length = 576

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/611 (39%), Positives = 350/611 (57%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +D+D  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASEMDLSDLEAFYREAKKHYDDDADFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  + +KN   E    ELS   + V+ G IKYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAYDRALKLIAEKNPQME--SDELSALAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + AGI  + L     + P++L  E+EFALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVASIFKRAGIQEDSL-----TQPITLSDEREFALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  +++     V   RL LA  TAK +
Sbjct: 506  ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAESD----DVRQSRLRLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I T
Sbjct: 562  KQGLDTLGIET 572



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/375 (36%), Positives = 212/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53  -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +D+D  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASEMDLSDLEAFYREAKKHYDDDADFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/374 (36%), Positives = 211/374 (56%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +D+D  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASEMDLSDLEAFYREAKKHYDDDADFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|190149308|ref|YP_001967833.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
            str. AP76]
 gi|303250518|ref|ZP_07336715.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
            str. Femo]
 gi|303251862|ref|ZP_07338033.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
            str. 4226]
 gi|307244840|ref|ZP_07526939.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
            str. 4074]
 gi|307247015|ref|ZP_07529069.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
            str. S1536]
 gi|307249238|ref|ZP_07531235.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
            str. M62]
 gi|307251560|ref|ZP_07533467.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
            str. Femo]
 gi|307253794|ref|ZP_07535648.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
            str. CVJ13261]
 gi|307256060|ref|ZP_07537848.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
            str. D13039]
 gi|307258250|ref|ZP_07539993.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
            str. 56153]
 gi|307260491|ref|ZP_07542185.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
            str. 1096]
 gi|307262621|ref|ZP_07544251.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
            str. N273]
 gi|189914439|gb|ACE60691.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
            str. AP76]
 gi|302649292|gb|EFL79477.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
            str. 4226]
 gi|302650506|gb|EFL80665.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
            str. Femo]
 gi|306854285|gb|EFM86491.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
            str. 4074]
 gi|306856467|gb|EFM88616.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
            str. S1536]
 gi|306858762|gb|EFM90821.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
            str. M62]
 gi|306861024|gb|EFM93030.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
            str. Femo]
 gi|306863278|gb|EFM95218.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
            str. CVJ13261]
 gi|306865482|gb|EFM97377.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
            str. D13039]
 gi|306867710|gb|EFM99555.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
            str. 56153]
 gi|306869803|gb|EFN01586.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
            str. 1096]
 gi|306872044|gb|EFN03758.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
            str. N273]
          Length = 575

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/567 (42%), Positives = 342/567 (60%), Gaps = 41/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 198  EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +AA + R E   AD ++  +D  Q  H +      +KAG + P    ++   FG++LG+D
Sbjct: 318  IAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYV-PESFSLEHPFFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL +LLDE + R+ DKL  + R T+LT  E +   +AVA G +KY+DL
Sbjct: 377  GKPFKTRSGGTVKLKDLLDEAVERA-DKLISE-RSTDLTAEEKAAVVEAVAIGSVKYSDL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTRI SI   AGI+   L     +  ++L  
Sbjct: 435  SKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFNRAGIDVNGL-----NGEINLTE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE ALA  LL+  + L  V +D   + LC+YLY+++ AFS FY+ C  +  +     + 
Sbjct: 490  DKERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFYEACPMLNAE-----EN 544

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K+  D+L I+T
Sbjct: 545  VKNSRLSLAALTAKTLKQGLDLLGIKT 571



 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 201/331 (60%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35  EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139 GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 198 EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258 ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +AA + R E   AD ++  +D R    + QA
Sbjct: 318 IAAAKYRYETLNADRVLVFSDSRQAQHMQQA 348



 Score =  243 bits (621), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 200/330 (60%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 198  EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +AA + R E   AD ++  +D R    + Q
Sbjct: 318  IAAAKYRYETLNADRVLVFSDSRQAQHMQQ 347


>gi|53729104|ref|ZP_00134063.2| COG0018: Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
            serovar 1 str. 4074]
          Length = 575

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/567 (42%), Positives = 342/567 (60%), Gaps = 41/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 198  EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +AA + R E   AD ++  +D  Q  H +      +KAG + P    ++   FG++LG+D
Sbjct: 318  IAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYV-PESFSLEHPFFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL +LLDE + R+ DKL  + R T+LT  E +   +AVA G +KY+DL
Sbjct: 377  GKPFKTRSGGTVKLKDLLDEAVERA-DKLISE-RSTDLTAEEKAAVVEAVAIGSVKYSDL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTRI SI   AGI+   L     +  ++L  
Sbjct: 435  SKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFNRAGIDVNGL-----NGEINLTE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE ALA  LL+  + L  V +D   + LC+YLY+++ AFS FY+ C  +  +     + 
Sbjct: 490  DKERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFYEACPMLNAE-----EN 544

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K+  D+L I+T
Sbjct: 545  VKNSRLSLAALTAKTLKQGLDLLGIKT 571



 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 201/331 (60%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35  EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139 GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 198 EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258 ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +AA + R E   AD ++  +D R    + QA
Sbjct: 318 IAAAKYRYETLNADRVLVFSDSRQAQHMQQA 348



 Score =  243 bits (620), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 200/330 (60%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 198  EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +AA + R E   AD ++  +D R    + Q
Sbjct: 318  IAAAKYRYETLNADRVLVFSDSRQAQHMQQ 347


>gi|251789870|ref|YP_003004591.1| arginyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538491|gb|ACT07112.1| arginyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 576

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 242/611 (39%), Positives = 344/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+   H   +A     D  A V  + +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQALLSEK-VHQAMIAAGAPADSEAMVRQSAKA---QFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 588
              +P  +A+ +   +         L  +  K E+A PGF+N+FL   +   Q++      
Sbjct: 53   -MSPRQLAEKVVQTL--------QLDGIAAKTEIAGPGFINIFLDSHWLSAQLEHALAAP 103

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
            ++ +  V+P T      ++VD+S+PN+AKEMHVG+LRSTIIGD   R LE+LGH V+R N
Sbjct: 104  NLGILPVEPQT------IVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHRVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIAHL+D   +       +ADL+AFY+E+KK++DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAHLED-VQNGSASDLELADLEAFYREAKKQYDEDAAFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W  + D++    Q+ YDRLNV+LT     GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRSMWRKLVDITMVQNQRSYDRLNVSLTPNDVMGESLYNAMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L E  +G  +++        GE  G I   + K DGG+ Y T+D+A  + R E+  AD +
Sbjct: 277  LAEESEGAIVVYLDEYKNKEGEAMGVI---VQKKDGGYLYTTTDIACAKYRYEKLGADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWSIVRKAGYV-PESVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  +  KN   E+  TEL +  Q V+ G +KYADLS NR  DY+F +D ML
Sbjct: 393  LLDEAYERALALIAGKN--PEMDRTELEQLAQVVSIGAVKYADLSKNRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR++SI + AG+    L     + P++L  E E ALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVSSIFKRAGVEESSL-----TQPIALTAEHEQALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V RD   H +C YLYD++  FS FY+NC  +  D+E   ++    RL LA  TAK +
Sbjct: 506  VTTVARDGTPHVMCAYLYDLAGLFSGFYENCPILNADSENTRQS----RLKLARLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K   D L I+T
Sbjct: 562  KTGLDTLGIQT 572



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/375 (37%), Positives = 208/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+   H   +A     D  A V  + +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQALLSEK-VHQAMIAAGAPADSEAMVRQSAKA---QFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 198
             +P  +A+ +   +         L  +  K E+A PGF+N+FL   +   Q++      
Sbjct: 53  -MSPRQLAEKVVQTL--------QLDGIAAKTEIAGPGFINIFLDSHWLSAQLEHALAAP 103

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
           ++ +  V+P T      ++VD+S+PN+AKEMHVG+LRSTIIGD   R LE+LGH V+R N
Sbjct: 104 NLGILPVEPQT------IVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHRVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIAHL+D   +       +ADL+AFY+E+KK++DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAHLED-VQNGSASDLELADLEAFYREAKKQYDEDAAFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W  + D++    Q+ YDRLNV+LT     GES Y   + ++V  L+ KG
Sbjct: 217 LQSGDEYCRSMWRKLVDITMVQNQRSYDRLNVSLTPNDVMGESLYNAMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L E  +G  +++        GE  G I   + K DGG+ Y T+D+A  + R E+  AD +
Sbjct: 277 LAEESEGAIVVYLDEYKNKEGEAMGVI---VQKKDGGYLYTTTDIACAKYRYEKLGADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 207/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+   H   +A     D  A V  + +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQALLSEK-VHQAMIAAGAPADSEAMVRQSAKA---QFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 1215
              +P  +A+ +   +         L  +  K E+A PGF+N+FL   +   Q++      
Sbjct: 53   -MSPRQLAEKVVQTL--------QLDGIAAKTEIAGPGFINIFLDSHWLSAQLEHALAAP 103

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
            ++ +  V+P T      ++VD+S+PN+AKEMHVG+LRSTIIGD   R LE+LGH V+R N
Sbjct: 104  NLGILPVEPQT------IVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHRVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIAHL+D   +       +ADL+AFY+E+KK++DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAHLED-VQNGSASDLELADLEAFYREAKKQYDEDAAFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W  + D++    Q+ YDRLNV+LT     GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRSMWRKLVDITMVQNQRSYDRLNVSLTPNDVMGESLYNAMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L E  +G  +++        GE  G I   + K DGG+ Y T+D+A  + R E+  AD +
Sbjct: 277  LAEESEGAIVVYLDEYKNKEGEAMGVI---VQKKDGGYLYTTTDIACAKYRYEKLGADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|50121444|ref|YP_050611.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81644856|sp|Q6D474.1|SYR_ERWCT RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|49611970|emb|CAG75419.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 576

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/611 (38%), Positives = 349/611 (57%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+++R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNIIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPNIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  + +KN   E    EL+   + V+ G IKYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAYGRALKLIAEKNPQME--SDELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + AGI  + L     + P++L  E+EFALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVASIFKRAGIQEDTL-----TQPITLNDEREFALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  + +     V   RL LA  TAK +
Sbjct: 506  ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAEND----DVRQSRLRLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I T
Sbjct: 562  KQGLDTLGIET 572



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/375 (36%), Positives = 212/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQALTAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53  -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+++R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNIIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPNIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 137/374 (36%), Positives = 211/374 (56%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+++R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNIIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPNIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|419802983|ref|ZP_14328161.1| arginine--tRNA ligase [Haemophilus parainfluenzae HK262]
 gi|419844850|ref|ZP_14368137.1| arginine--tRNA ligase [Haemophilus parainfluenzae HK2019]
 gi|385188779|gb|EIF36252.1| arginine--tRNA ligase [Haemophilus parainfluenzae HK262]
 gi|386416776|gb|EIJ31268.1| arginine--tRNA ligase [Haemophilus parainfluenzae HK2019]
          Length = 577

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/602 (39%), Positives = 348/602 (57%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+  A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMIAA----GADEQCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ +          +  L+ V +K E+A PGF+N+FL+  +    +   + + 
Sbjct: 53   -LNPREFAQKVLD--------HADLSDVAEKTEIAGPGFINIFLNPTWLANNVSAALKDQ 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                + N+K  +++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGVSANEKQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMENEHASEMELQDLEAFYREAKKHYDEDEAFAEKARNYVVKLQGGDE 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
              +  W+ + D++ +  Q+ YDRLNVTLTE+   GES Y   +  +V  L+K+GL   D+
Sbjct: 223  YCRTMWKKLVDITMQQNQRNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLAVEDE 282

Query: 772  GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q 
Sbjct: 283  GALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE + R+
Sbjct: 343  QHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               + +KN  T L+  E +   +AV  G +KYADLS NR  DYVF +D ML   GNTA Y
Sbjct: 402  TVLINEKN--TNLSDEEKTAVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTRI SI   A +N   L  A     + L  EKE ALA  LL+  + +  V ++  
Sbjct: 460  MQYAYTRIRSIFNKADVNPTALAEA----KIQLSDEKERALAIKLLQFEEAVQTVGKEGT 515

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLY+++  FS FY++C  +  + E    +V   RL LA  T K +K+  ++L I
Sbjct: 516  PHVLCAYLYELAGVFSSFYEHCPILNAEDE----SVKLSRLKLASLTEKTLKQGLELLGI 571

Query: 1067 RT 1068
            +T
Sbjct: 572  KT 573



 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/431 (35%), Positives = 235/431 (54%), Gaps = 29/431 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+  A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMIAA----GADEQCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ +          +  L+ V +K E+A PGF+N+FL+  +    +   + + 
Sbjct: 53  -LNPREFAQKVLD--------HADLSDVAEKTEIAGPGFINIFLNPTWLANNVSAALKDQ 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
               + N+K  +++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104 NLGVSANEKQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE F ++A   VV LQ  D 
Sbjct: 164 TQFGMLIAYLE-KMENEHASEMELQDLEAFYREAKKHYDEDEAFAEKARNYVVKLQGGDE 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
             +  W+ + D++ +  Q+ YDRLNVTLTE+   GES Y   +  +V  L+K+GL   D+
Sbjct: 223 YCRTMWKKLVDITMQQNQRNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLAVEDE 282

Query: 382 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283 GALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 437 HQVLQAIAEEEKKQGISSSSSSQTKGTA---KKMNVPVRDRMSVRDYLSDVFTHAVQVAF 493
             + QA     K   +  S S + K       K   P + R      L+D+   A++ A 
Sbjct: 343 QHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERAT 402

Query: 494 PELGDKTASVA 504
             + +K  +++
Sbjct: 403 VLINEKNTNLS 413



 Score =  248 bits (632), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/365 (38%), Positives = 210/365 (57%), Gaps = 26/365 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+  A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMIAA----GADEQCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ +          +  L+ V +K E+A PGF+N+FL+  +    +   + + 
Sbjct: 53   -LNPREFAQKVLD--------HADLSDVAEKTEIAGPGFINIFLNPTWLANNVSAALKDQ 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                + N+K  +++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGVSANEKQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMENEHASEMELQDLEAFYREAKKHYDEDEAFAEKARNYVVKLQGGDE 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
              +  W+ + D++ +  Q+ YDRLNVTLTE+   GES Y   +  +V  L+K+GL   D+
Sbjct: 223  YCRTMWKKLVDITMQQNQRNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLAVEDE 282

Query: 1399 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283  GALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 1454 HQVLQ 1458
              + Q
Sbjct: 343  QHMQQ 347


>gi|359298724|ref|ZP_09184563.1| arginyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
          Length = 575

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 252/611 (41%), Positives = 355/611 (58%), Gaps = 57/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+  A    G    + A   +    +FGD+Q N AM   K       
Sbjct: 1    MNIQQILSDKIKQAMIAA----GADENAEALVRQSGKPEFGDYQANGAMGAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ I          N +L  + +K+E+A PGF+N+FLS        KD + NG
Sbjct: 53   -INPREFAQKILD--------NLNLDGIAEKLEIAGPGFINIFLS--------KDWLANG 95

Query: 595  VQPP---------TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 645
                         T N +  ++VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG++V+
Sbjct: 96   ANSALQAVNFGIKTANPQ-TIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVI 154

Query: 646  RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 705
            R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K  +DED  F ++A   
Sbjct: 155  RANHVGDWGTQFGMLIAYLE-KMENENASQLELSDLEAFYRAAKAHYDEDAAFAEKARGY 213

Query: 706  VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLE 762
            VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   GES Y   + ++V  L+
Sbjct: 214  VVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLK 273

Query: 763  KKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWI 817
             KGL   DDG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KAD  
Sbjct: 274  AKGLAVEDDGALVVFLSEFKNKDGDPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRA 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +  +D  Q  H +      +KAG + P+   ++   FG++LG+D K FKTRSGDTVKL +
Sbjct: 334  LVFSDSRQAQHMQQAWLITRKAGYV-PDSFSLEHPFFGMMLGKDGKPFKTRSGDTVKLKD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+ D L  + R T LT  E +   +AVA G +KYADLS NR  DYVF +D ML
Sbjct: 393  LLDEAIERA-DALISQ-RSTNLTEEEKAAVVEAVAIGSVKYADLSKNRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTRI S+   AGI+      +A S  + L  EKE ALA  LL+  + 
Sbjct: 451  SFEGNTAPYMQYAYTRIRSVFAKAGIDP-----SALSGEIILTEEKERALAIKLLQFEEA 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            L  V ++   H LC+YLY+++ AFS FY+ C  +  +AE K+K     RL L++ TA+ +
Sbjct: 506  LNSVAKEGMPHILCQYLYELAGAFSSFYEACPML--NAEEKVK---NSRLRLSDLTARTL 560

Query: 1058 KKCFDILNIRT 1068
            K+  D+L I+T
Sbjct: 561  KQGLDLLGIKT 571



 Score =  240 bits (612), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/375 (39%), Positives = 210/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+  A    G    + A   +    +FGD+Q N AM   K       
Sbjct: 1   MNIQQILSDKIKQAMIAA----GADENAEALVRQSGKPEFGDYQANGAMGAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ I          N +L  + +K+E+A PGF+N+FLS        KD + NG
Sbjct: 53  -INPREFAQKILD--------NLNLDGIAEKLEIAGPGFINIFLS--------KDWLANG 95

Query: 205 VQPP---------TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 255
                        T N +  ++VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG++V+
Sbjct: 96  ANSALQAVNFGIKTANPQ-TIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVI 154

Query: 256 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 315
           R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K  +DED  F ++A   
Sbjct: 155 RANHVGDWGTQFGMLIAYLE-KMENENASQLELSDLEAFYRAAKAHYDEDAAFAEKARGY 213

Query: 316 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLE 372
           VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   GES Y   + ++V  L+
Sbjct: 214 VVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLK 273

Query: 373 KKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWI 427
            KGL   DDG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KAD  
Sbjct: 274 AKGLAVEDDGALVVFLSEFKNKDGDPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRA 333

Query: 428 VYVTDHRSYHQVLQA 442
           +  +D R    + QA
Sbjct: 334 LVFSDSRQAQHMQQA 348



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/374 (39%), Positives = 209/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+  A    G    + A   +    +FGD+Q N AM   K       
Sbjct: 1    MNIQQILSDKIKQAMIAA----GADENAEALVRQSGKPEFGDYQANGAMGAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ I          N +L  + +K+E+A PGF+N+FLS        KD + NG
Sbjct: 53   -INPREFAQKILD--------NLNLDGIAEKLEIAGPGFINIFLS--------KDWLANG 95

Query: 1222 VQPP---------TLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 1272
                         T N +  ++VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG++V+
Sbjct: 96   ANSALQAVNFGIKTANPQ-TIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVI 154

Query: 1273 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 1332
            R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K  +DED  F ++A   
Sbjct: 155  RANHVGDWGTQFGMLIAYLE-KMENENASQLELSDLEAFYRAAKAHYDEDAAFAEKARGY 213

Query: 1333 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLE 1389
            VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   GES Y   + ++V  L+
Sbjct: 214  VVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLK 273

Query: 1390 KKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
             KGL   DDG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KAD  
Sbjct: 274  AKGLAVEDDGALVVFLSEFKNKDGDPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRA 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +  +D R    + Q
Sbjct: 334  LVFSDSRQAQHMQQ 347


>gi|407692986|ref|YP_006817775.1| arginyl-tRNA ligase [Actinobacillus suis H91-0380]
 gi|407389043|gb|AFU19536.1| arginyl-tRNA ligase [Actinobacillus suis H91-0380]
          Length = 575

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/567 (41%), Positives = 340/567 (59%), Gaps = 41/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNAIADKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 198  EHYDSDEVFAEKARNYVVKLQGGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKNVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 801
            ES Y   + ++V  L+ KGL   DDG  +++      +D   + + + K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDLMGVIVQKKDGGFLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +AA + R E   AD ++  +D  Q  H +      +KAG + P    ++   FG++LG+D
Sbjct: 318  IAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYV-PENFSLEHPFFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL +LLDE + R+ DKL  + R T+LT  E +   +AVA G +KY+DL
Sbjct: 377  GKPFKTRSGGTVKLKDLLDEAVERA-DKLISE-RSTDLTAEEKAAVVEAVAIGSVKYSDL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTRI SI   AGI+   L     +  ++L  
Sbjct: 435  SKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFNRAGIDVNGL-----NGEINLTE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE ALA  LL+  + L  V +D   H LC+YLY+++ AFS FY+ C  +  +     + 
Sbjct: 490  DKERALAVKLLQFEEALNGVAKDGMPHILCQYLYELAGAFSSFYEACPMLNAE-----EN 544

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K+  D+L I+T
Sbjct: 545  VKNSRLRLAALTAKTLKQGLDLLGIKT 571



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 199/331 (60%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35  EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNAIADKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139 GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 198 EHYDSDEVFAEKARNYVVKLQGGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKNVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 411
           ES Y   + ++V  L+ KGL   DDG  +++      +D   + + + K DGGF Y T+D
Sbjct: 258 ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDLMGVIVQKKDGGFLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +AA + R E   AD ++  +D R    + QA
Sbjct: 318 IAAAKYRYETLNADRVLVFSDSRQAQHMQQA 348



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 198/330 (60%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNAIADKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 198  EHYDSDEVFAEKARNYVVKLQGGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKNVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 1428
            ES Y   + ++V  L+ KGL   DDG  +++      +D   + + + K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDLMGVIVQKKDGGFLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +AA + R E   AD ++  +D R    + Q
Sbjct: 318  IAAAKYRYETLNADRVLVFSDSRQAQHMQQ 347


>gi|410626602|ref|ZP_11337357.1| arginyl-tRNA synthetase [Glaciecola mesophila KMM 241]
 gi|410153849|dbj|GAC24126.1| arginyl-tRNA synthetase [Glaciecola mesophila KMM 241]
          Length = 578

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/563 (41%), Positives = 330/563 (58%), Gaps = 32/563 (5%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+Q N AMAL K+ K K     P DIA+ I   V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIAEKIVEAV--------ELDGIAEKLEVAGPGF 82

Query: 574  VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            +N++LS+ +   Q+ +   +            V+VD+SSPN+AKEMHVGHLR+TIIGD +
Sbjct: 83   INIYLSKAWLAAQLSEAAADTRLNIEAQPSKTVVVDYSSPNLAKEMHVGHLRTTIIGDAV 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
             + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K RFD
Sbjct: 143  VKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAKVRFD 202

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E+E F  RA + VV LQ  D      W+   DVS    +++Y +LNV+LT     GES Y
Sbjct: 203  EEEGFADRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHKLNVSLTRDDIMGESAY 262

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAI 805
               +  +V  L+ KGL     G ++++     +  G+    IV KS GG+ Y T+DLAAI
Sbjct: 263  NHDLANVVNELQAKGLAVESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTDLAAI 322

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R ++  AD  + +TD  Q +HF+  E  A+KAG + P +T  +   FG++LG D + F
Sbjct: 323  RHRNKQLHADRTLILTDARQALHFKQTELVARKAGFIEPEQT-YEHCPFGMMLGNDGRPF 381

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTR+G TVKL ELLDE + R+ + L  K R T+L+  EL      +  G +KYADLS NR
Sbjct: 382  KTRTGGTVKLVELLDEAVERA-EALLSK-RETDLSSDELKVLANKIGIGAVKYADLSKNR 439

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY+FS+D ML   GNTA YL YAYTR+ SI R AG++ + L     + P+SL+  +E 
Sbjct: 440  TTDYMFSWDSMLSFEGNTAPYLQYAYTRVMSIFRKAGVDHQTL-----NAPISLDAPQEK 494

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA   L+  + +  V  +   H LC YLY++++ F  FY+ C  ++   +G  + V   
Sbjct: 495  ILAVKQLQYVEAINQVIAEGTPHVLCTYLYELASLFMSFYEACPMLK---DGIEQDVRDS 551

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            R+ LA  TAK ++    +L I T
Sbjct: 552  RMTLAALTAKTLQSGLSLLGIDT 574



 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 188/319 (58%), Gaps = 21/319 (6%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+Q N AMAL K+ K K     P DIA+ I   V         L  + +K+EVA PGF
Sbjct: 36  FGDYQFNGAMALAKVLKQK-----PRDIAEKIVEAV--------ELDGIAEKLEVAGPGF 82

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N++LS+ +   Q+ +   +            V+VD+SSPN+AKEMHVGHLR+TIIGD +
Sbjct: 83  INIYLSKAWLAAQLSEAAADTRLNIEAQPSKTVVVDYSSPNLAKEMHVGHLRTTIIGDAV 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K RFD
Sbjct: 143 VKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAKVRFD 202

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E+E F  RA + VV LQ  D      W+   DVS    +++Y +LNV+LT     GES Y
Sbjct: 203 EEEGFADRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHKLNVSLTRDDIMGESAY 262

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAI 415
              +  +V  L+ KGL     G ++++     +  G+    IV KS GG+ Y T+DLAAI
Sbjct: 263 NHDLANVVNELQAKGLAVESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTDLAAI 322

Query: 416 RQRIEEEKADWIVYVTDHR 434
           R R ++  AD  + +TD R
Sbjct: 323 RHRNKQLHADRTLILTDAR 341



 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 188/319 (58%), Gaps = 21/319 (6%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGD+Q N AMAL K+ K K     P DIA+ I   V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIAEKIVEAV--------ELDGIAEKLEVAGPGF 82

Query: 1201 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            +N++LS+ +   Q+ +   +            V+VD+SSPN+AKEMHVGHLR+TIIGD +
Sbjct: 83   INIYLSKAWLAAQLSEAAADTRLNIEAQPSKTVVVDYSSPNLAKEMHVGHLRTTIIGDAV 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
             + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K RFD
Sbjct: 143  VKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAKVRFD 202

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E+E F  RA + VV LQ  D      W+   DVS    +++Y +LNV+LT     GES Y
Sbjct: 203  EEEGFADRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHKLNVSLTRDDIMGESAY 262

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               +  +V  L+ KGL     G ++++     +  G+    IV KS GG+ Y T+DLAAI
Sbjct: 263  NHDLANVVNELQAKGLAVESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTDLAAI 322

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R ++  AD  + +TD R
Sbjct: 323  RHRNKQLHADRTLILTDAR 341


>gi|345430103|ref|YP_004823223.1| arginyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
 gi|301156166|emb|CBW15637.1| arginyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 577

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/602 (39%), Positives = 347/602 (57%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+  A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMIAA----GADEQCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ +          +  L+ + +K E+A PGF+N+FL+  +    +   + + 
Sbjct: 53   -LNPREFAQKVLD--------HADLSDIAEKTEIAGPGFINIFLNPTWLANNVSAALKDQ 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                + N+K  +++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGVSANEKQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMENEHASEMELQDLEAFYREAKKHYDEDESFAEKARNYVVKLQGGDE 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
              +  W+ + D++ +  Q+ YDRLNVTLTE+   GES Y   +  +V  L+K+GL   D+
Sbjct: 223  YCRTMWKKLVDITMQQNQRNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLAVEDE 282

Query: 772  GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q 
Sbjct: 283  GALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE + R+
Sbjct: 343  QHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               + +KN  T L+  E +   +AV  G +KYADLS NR  DYVF +D ML   GNTA Y
Sbjct: 402  TVLINEKN--TNLSDEEKTAVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTRI SI   A +N   L  A     + L  EKE ALA  LL+  + +  V ++  
Sbjct: 460  MQYAYTRIRSIFNKANVNPTALAEA----KIQLSDEKERALAIKLLQFEEAVQTVGKEGT 515

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLY+++ AFS FY++C  +  + E     V   RL LA  T K +K+   +L I
Sbjct: 516  PHVLCAYLYELAGAFSSFYEHCPILNAEDE----NVKLSRLKLASLTEKTLKQGLALLGI 571

Query: 1067 RT 1068
            +T
Sbjct: 572  KT 573



 Score =  250 bits (639), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 235/431 (54%), Gaps = 29/431 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+  A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMIAA----GADEQCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ +          +  L+ + +K E+A PGF+N+FL+  +    +   + + 
Sbjct: 53  -LNPREFAQKVLD--------HADLSDIAEKTEIAGPGFINIFLNPTWLANNVSAALKDQ 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
               + N+K  +++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104 NLGVSANEKQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE F ++A   VV LQ  D 
Sbjct: 164 TQFGMLIAYLE-KMENEHASEMELQDLEAFYREAKKHYDEDESFAEKARNYVVKLQGGDE 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
             +  W+ + D++ +  Q+ YDRLNVTLTE+   GES Y   +  +V  L+K+GL   D+
Sbjct: 223 YCRTMWKKLVDITMQQNQRNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLAVEDE 282

Query: 382 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283 GALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 437 HQVLQAIAEEEKKQGISSSSSSQTKGTA---KKMNVPVRDRMSVRDYLSDVFTHAVQVAF 493
             + QA     K   +  S S + K       K   P + R      L+D+   A++ A 
Sbjct: 343 QHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERAT 402

Query: 494 PELGDKTASVA 504
             + +K  +++
Sbjct: 403 VLINEKNTNLS 413



 Score =  247 bits (630), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/365 (38%), Positives = 210/365 (57%), Gaps = 26/365 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+  A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMIAA----GADEQCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ +          +  L+ + +K E+A PGF+N+FL+  +    +   + + 
Sbjct: 53   -LNPREFAQKVLD--------HADLSDIAEKTEIAGPGFINIFLNPTWLANNVSAALKDQ 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                + N+K  +++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGVSANEKQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMENEHASEMELQDLEAFYREAKKHYDEDESFAEKARNYVVKLQGGDE 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
              +  W+ + D++ +  Q+ YDRLNVTLTE+   GES Y   +  +V  L+K+GL   D+
Sbjct: 223  YCRTMWKKLVDITMQQNQRNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLAVEDE 282

Query: 1399 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283  GALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 1454 HQVLQ 1458
              + Q
Sbjct: 343  QHMQQ 347


>gi|127511312|ref|YP_001092509.1| arginyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166232841|sp|A3Q9V2.1|SYR_SHELP RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|126636607|gb|ABO22250.1| arginyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 581

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/563 (41%), Positives = 333/563 (59%), Gaps = 35/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K+      +KNP ++AQ    ++   L  N  +AKV    E+A PGF+
Sbjct: 41   GDFATNLAMMLTKV-----ARKNPREVAQ----LIIDSLPQNSQVAKV----EIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F+       Q+   + +     TL     V+VD+SSPN+AKEMHVGHLRSTIIGD + 
Sbjct: 88   NFFIDENALTNQLMAALSDDHLGVTLPTPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 693
            R LE+ GH V+R NHVGDWGTQFGML+A++++       ++   +ADL++FY+ +K RFD
Sbjct: 148  RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAQQGEQAQVELADLESFYRAAKVRFD 207

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E E F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT    RGES Y
Sbjct: 208  ESEEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAY 267

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 805
               +EQ+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGGF Y TSDLAA+
Sbjct: 268  NDDLEQVVRDLDAQGLLSESNGAKVVFQDEFQTKEGEPLPVIIQKADGGFLYATSDLAAM 327

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R    KAD  +Y  DL Q +HF+ +   A+ A  + P  + ++ +GFG + GED + F
Sbjct: 328  RYRSNVLKADRALYFVDLRQALHFQQVFSLARTANFVRPELS-LEHMGFGTMNGEDGRPF 386

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSG  VKL +LL E   R+L+ ++ KN   ++   EL++  + V    +KYADLS NR
Sbjct: 387  KTRSGGVVKLVDLLSEAETRALELVRSKN--PDMDEEELAKIAKVVGIASVKYADLSKNR 444

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY+FSF++ML   GNTA YLLYAYTR+A I + A        +      + LEH+KE 
Sbjct: 445  ASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRAA------EIDLTGASIKLEHDKEK 498

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             L   L +  +VL  +      H LC YL++++ AFS FY+ C  +  D+E + K+    
Sbjct: 499  ELGNKLAQFAEVLGRMVAKGQPHALCGYLFELAGAFSSFYEACPVLAADSEDEKKS---- 554

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RLLLA+ TAK +K+  D+L I T
Sbjct: 555  RLLLAQLTAKTLKQGLDLLGIET 577



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/319 (43%), Positives = 190/319 (59%), Gaps = 22/319 (6%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K+      +KNP ++AQ    ++   L  N  +AKV    E+A PGF+
Sbjct: 41  GDFATNLAMMLTKV-----ARKNPREVAQ----LIIDSLPQNSQVAKV----EIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F+       Q+   + +     TL     V+VD+SSPN+AKEMHVGHLRSTIIGD + 
Sbjct: 88  NFFIDENALTNQLMAALSDDHLGVTLPTPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 303
           R LE+ GH V+R NHVGDWGTQFGML+A++++       ++   +ADL++FY+ +K RFD
Sbjct: 148 RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAQQGEQAQVELADLESFYRAAKVRFD 207

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E E F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT    RGES Y
Sbjct: 208 ESEEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAY 267

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 415
              +EQ+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGGF Y TSDLAA+
Sbjct: 268 NDDLEQVVRDLDAQGLLSESNGAKVVFQDEFQTKEGEPLPVIIQKADGGFLYATSDLAAM 327

Query: 416 RQRIEEEKADWIVYVTDHR 434
           R R    KAD  +Y  D R
Sbjct: 328 RYRSNVLKADRALYFVDLR 346



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/319 (43%), Positives = 190/319 (59%), Gaps = 22/319 (6%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K+      +KNP ++AQ    ++   L  N  +AKV    E+A PGF+
Sbjct: 41   GDFATNLAMMLTKV-----ARKNPREVAQ----LIIDSLPQNSQVAKV----EIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F+       Q+   + +     TL     V+VD+SSPN+AKEMHVGHLRSTIIGD + 
Sbjct: 88   NFFIDENALTNQLMAALSDDHLGVTLPTPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 1320
            R LE+ GH V+R NHVGDWGTQFGML+A++++       ++   +ADL++FY+ +K RFD
Sbjct: 148  RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAQQGEQAQVELADLESFYRAAKVRFD 207

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E E F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT    RGES Y
Sbjct: 208  ESEEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAY 267

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 1432
               +EQ+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGGF Y TSDLAA+
Sbjct: 268  NDDLEQVVRDLDAQGLLSESNGAKVVFQDEFQTKEGEPLPVIIQKADGGFLYATSDLAAM 327

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R    KAD  +Y  D R
Sbjct: 328  RYRSNVLKADRALYFVDLR 346


>gi|378697828|ref|YP_005179786.1| arginyl-tRNA synthetase [Haemophilus influenzae 10810]
 gi|301170344|emb|CBW29950.1| arginyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 577

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVTRTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/441 (35%), Positives = 244/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVTRTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/368 (39%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVTRTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|428210471|ref|YP_007094824.1| arginyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
 gi|428012392|gb|AFY90955.1| arginyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
          Length = 589

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/569 (40%), Positives = 341/569 (59%), Gaps = 38/569 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKP 571
            KFGD+Q N A+ L K        K P  IA+ I   +  ++   NP+         VA P
Sbjct: 38   KFGDYQANVALPLAKQVG-----KPPRAIAEQIVLKLDVNDFCENPT---------VAGP 83

Query: 572  GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            GF+N+ L   Y   Q++ I  +   G+   ++    +V+VD+ SPNIAKEMHVGHLR  +
Sbjct: 84   GFINLTLKPAYLEAQLQKINPDPRLGIA--SVKHPKKVIVDYPSPNIAKEMHVGHLRPAV 141

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLT--KSPPIADLQAFYK 686
            IGD +SR+LE++GHDVVRL+HVGDWGT FGMLIA+LQ  +P+ LT  ++  + DL +FY+
Sbjct: 142  IGDCLSRILEFIGHDVVRLSHVGDWGTPFGMLIAYLQKAYPEALTTDENLNLGDLSSFYR 201

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT-LTER 745
            ++KK+FD DE FK+ A Q VV LQ  +     AW+++C +S R ++ IYD + +    ER
Sbjct: 202  QAKKQFDTDEGFKEAARQAVVQLQAGEEKTILAWKIVCQLSSRAYRVIYDLMGIAPFIER 261

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTS 800
            GESFY   + + +  LE KGL+E+D G K ++ E     +   +P+ + KSDGG+ Y T+
Sbjct: 262  GESFYNALLAETIEELEAKGLVEIDAGAKCIFLEGFTNKEGKPLPLIVQKSDGGYNYATT 321

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            DLAAIR R+  +KA  ++Y     Q  HF  + +  K+AG +  ++       FG+VLGE
Sbjct: 322  DLAAIRYRVNVDKAQRVIYPVGAEQTNHFAQIFQVGKRAGWIT-DEVEFFHAPFGLVLGE 380

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKY 918
            D  K KTRSG+ V+L +LLDE +  +   L+ + +      TE  ++   Q +    +KY
Sbjct: 381  DGSKLKTRSGEAVRLKDLLDEAIAHARKDLESRLKEEGREETEEFINHVAQVIGISAVKY 440

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NRN +Y+FS+DKML  +GNTA Y+LYAY RI  I+R  GI+ E L     +  V 
Sbjct: 441  ADLSQNRNSNYIFSYDKMLALQGNTAPYMLYAYARIQGISRKGGIDFEQL---GDNVKVV 497

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK-DAEG 1037
            L+HE E  LAK LL++++V+  +  DL  + LCEYL+ +S  F++FYD    +   +AE 
Sbjct: 498  LQHETELVLAKHLLQLDEVISTIEEDLLPNRLCEYLFQLSQKFNQFYDRDRGVPVLNAE- 556

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
              +   T RL+L   TA+ +K    +L I
Sbjct: 557  --EPQRTSRLVLCNLTARTLKLGLSLLGI 583



 Score =  251 bits (640), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 199/319 (62%), Gaps = 28/319 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKP 181
           KFGD+Q N A+ L K        K P  IA+ I   +  ++   NP+         VA P
Sbjct: 38  KFGDYQANVALPLAKQVG-----KPPRAIAEQIVLKLDVNDFCENPT---------VAGP 83

Query: 182 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           GF+N+ L   Y   Q++ I  +   G+   ++    +V+VD+ SPNIAKEMHVGHLR  +
Sbjct: 84  GFINLTLKPAYLEAQLQKINPDPRLGIA--SVKHPKKVIVDYPSPNIAKEMHVGHLRPAV 141

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLT--KSPPIADLQAFYK 296
           IGD +SR+LE++GHDVVRL+HVGDWGT FGMLIA+LQ  +P+ LT  ++  + DL +FY+
Sbjct: 142 IGDCLSRILEFIGHDVVRLSHVGDWGTPFGMLIAYLQKAYPEALTTDENLNLGDLSSFYR 201

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT-LTER 355
           ++KK+FD DE FK+ A Q VV LQ  +     AW+++C +S R ++ IYD + +    ER
Sbjct: 202 QAKKQFDTDEGFKEAARQAVVQLQAGEEKTILAWKIVCQLSSRAYRVIYDLMGIAPFIER 261

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTS 410
           GESFY   + + +  LE KGL+E+D G K ++ E     +   +P+ + KSDGG+ Y T+
Sbjct: 262 GESFYNALLAETIEELEAKGLVEIDAGAKCIFLEGFTNKEGKPLPLIVQKSDGGYNYATT 321

Query: 411 DLAAIRQRIEEEKADWIVY 429
           DLAAIR R+  +KA  ++Y
Sbjct: 322 DLAAIRYRVNVDKAQRVIY 340



 Score =  251 bits (640), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 199/319 (62%), Gaps = 28/319 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKP 1198
            KFGD+Q N A+ L K        K P  IA+ I   +  ++   NP+         VA P
Sbjct: 38   KFGDYQANVALPLAKQVG-----KPPRAIAEQIVLKLDVNDFCENPT---------VAGP 83

Query: 1199 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            GF+N+ L   Y   Q++ I  +   G+   ++    +V+VD+ SPNIAKEMHVGHLR  +
Sbjct: 84   GFINLTLKPAYLEAQLQKINPDPRLGIA--SVKHPKKVIVDYPSPNIAKEMHVGHLRPAV 141

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLT--KSPPIADLQAFYK 1313
            IGD +SR+LE++GHDVVRL+HVGDWGT FGMLIA+LQ  +P+ LT  ++  + DL +FY+
Sbjct: 142  IGDCLSRILEFIGHDVVRLSHVGDWGTPFGMLIAYLQKAYPEALTTDENLNLGDLSSFYR 201

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVT-LTER 1372
            ++KK+FD DE FK+ A Q VV LQ  +     AW+++C +S R ++ IYD + +    ER
Sbjct: 202  QAKKQFDTDEGFKEAARQAVVQLQAGEEKTILAWKIVCQLSSRAYRVIYDLMGIAPFIER 261

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTS 1427
            GESFY   + + +  LE KGL+E+D G K ++ E     +   +P+ + KSDGG+ Y T+
Sbjct: 262  GESFYNALLAETIEELEAKGLVEIDAGAKCIFLEGFTNKEGKPLPLIVQKSDGGYNYATT 321

Query: 1428 DLAAIRQRIEEEKADWIVY 1446
            DLAAIR R+  +KA  ++Y
Sbjct: 322  DLAAIRYRVNVDKAQRVIY 340


>gi|109897684|ref|YP_660939.1| arginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064815|sp|Q15W53.1|SYR_PSEA6 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|109699965|gb|ABG39885.1| arginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 578

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/567 (41%), Positives = 331/567 (58%), Gaps = 40/567 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+Q N AMAL K+ K K     P DIA+ I   V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIAEKIVEAV--------ELDGIAEKLEVAGPGF 82

Query: 574  VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 629
            +N++LS+ +   Q+     +    P LN + +    V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83   INIYLSKEWLAAQLS----HAAADPRLNIESQPTKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139  GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
             RFDE+E F  RA + VV LQ  D      W+   DVS    +++Y +LNV+LT     G
Sbjct: 199  VRFDEEEGFADRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHKLNVSLTRDDIMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL     G ++++     +  G+    IV KS GG+ Y T+D
Sbjct: 259  ESAYNHDLANVVSELQAKGLAVESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTD 318

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAAIR R ++  AD  + +TD  Q +HF+  E  A+KAG + P +T  +   FG++LG D
Sbjct: 319  LAAIRHRNKQLHADRTLILTDARQALHFKQTELVARKAGFIEPEQT-YEHCPFGMMLGND 377

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR+G TVKL ELLDE + R+   L    R T+L+  EL      +  G +KYADL
Sbjct: 378  GRPFKTRTGGTVKLVELLDEAVERAETLL--SKRETDLSSDELKVLANKIGIGAVKYADL 435

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+FS+D ML   GNTA YL YAYTR+ SI R AG++ + L     + P+SL+ 
Sbjct: 436  SKNRTTDYMFSWDSMLSFEGNTAPYLQYAYTRVMSIFRKAGVDHQTL-----NAPISLDA 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
             +E  LA   L+  + +  V  +   H LC YLY++++ F  FY+ C  ++   E   + 
Sbjct: 491  PQEKILAVKQLQYVEAINQVIAEGTPHVLCTYLYELASLFMSFYEACPMLKDGIE---QD 547

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   R+ LA  TAK ++    +L I T
Sbjct: 548  VRDSRMTLAALTAKTLQSGLSLLGIDT 574



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 192/323 (59%), Gaps = 29/323 (8%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+Q N AMAL K+ K K     P DIA+ I   V         L  + +K+EVA PGF
Sbjct: 36  FGDYQFNGAMALAKVLKQK-----PRDIAEKIVEAV--------ELDGIAEKLEVAGPGF 82

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 239
           +N++LS+ +   Q+     +    P LN + +    V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83  INIYLSKEWLAAQLS----HAAADPRLNIESQPTKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139 GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
            RFDE+E F  RA + VV LQ  D      W+   DVS    +++Y +LNV+LT     G
Sbjct: 199 VRFDEEEGFADRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHKLNVSLTRDDIMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL     G ++++     +  G+    IV KS GG+ Y T+D
Sbjct: 259 ESAYNHDLANVVSELQAKGLAVESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTD 318

Query: 412 LAAIRQRIEEEKADWIVYVTDHR 434
           LAAIR R ++  AD  + +TD R
Sbjct: 319 LAAIRHRNKQLHADRTLILTDAR 341



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 192/323 (59%), Gaps = 29/323 (8%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGD+Q N AMAL K+ K K     P DIA+ I   V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIAEKIVEAV--------ELDGIAEKLEVAGPGF 82

Query: 1201 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 1256
            +N++LS+ +   Q+     +    P LN + +    V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83   INIYLSKEWLAAQLS----HAAADPRLNIESQPTKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139  GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
             RFDE+E F  RA + VV LQ  D      W+   DVS    +++Y +LNV+LT     G
Sbjct: 199  VRFDEEEGFADRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHKLNVSLTRDDIMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL     G ++++     +  G+    IV KS GG+ Y T+D
Sbjct: 259  ESAYNHDLANVVSELQAKGLAVESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTD 318

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LAAIR R ++  AD  + +TD R
Sbjct: 319  LAAIRHRNKQLHADRTLILTDAR 341


>gi|126207527|ref|YP_001052752.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
            str. L20]
 gi|165975497|ref|YP_001651090.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
            str. JL03]
 gi|126096319|gb|ABN73147.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
            str. L20]
 gi|165875598|gb|ABY68646.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
            str. JL03]
          Length = 548

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/567 (42%), Positives = 342/567 (60%), Gaps = 41/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 8    EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 54

Query: 573  FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 55   FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 111

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 112  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 170

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 171  EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 230

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 231  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 290

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +AA + R E   AD ++  +D  Q  H +      +KAG + P    ++   FG++LG+D
Sbjct: 291  IAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYV-PESFSLEHPFFGMMLGKD 349

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL +LLDE + R+ DKL  + R T+LT  E +   +AVA G +KY+DL
Sbjct: 350  GKPFKTRSGGTVKLKDLLDEAVERA-DKLISE-RSTDLTAEEKAAVVEAVAIGSVKYSDL 407

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTRI SI   AGI+   L     +  ++L  
Sbjct: 408  SKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFNRAGIDVNGL-----NGEINLTE 462

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE ALA  LL+  + L  V +D   + LC+YLY+++ AFS FY+ C  +  +     + 
Sbjct: 463  DKERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFYEACPMLNAE-----EN 517

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K+  D+L I+T
Sbjct: 518  VKNSRLSLAALTAKTLKQGLDLLGIKT 544



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 201/331 (60%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 8   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 54

Query: 183 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 55  FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 111

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 112 GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 170

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 171 EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 230

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 231 ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 290

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +AA + R E   AD ++  +D R    + QA
Sbjct: 291 IAAAKYRYETLNADRVLVFSDSRQAQHMQQA 321



 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 200/330 (60%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 8    EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NADLNGIADKLEIAGPG 54

Query: 1200 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL++ +   Q  + +  VN G++  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 55   FINIFLNQAWLANQASEALQAVNFGIK--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 111

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 112  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASQMELSDLEAFYRAAK 170

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +D DE+F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTL+E+   G
Sbjct: 171  EHYDSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLSEKDVMG 230

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   + ++V  L+ KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 231  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 290

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +AA + R E   AD ++  +D R    + Q
Sbjct: 291  IAAAKYRYETLNADRVLVFSDSRQAQHMQQ 320


>gi|78185701|ref|YP_378135.1| arginyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|109895047|sp|Q3AVY5.1|SYR_SYNS9 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|78169995|gb|ABB27092.1| arginyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 590

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 250/611 (40%), Positives = 360/611 (58%), Gaps = 43/611 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            +S+   L      A+Q AFP+     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LSLSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
                       + IA+ +  +L+ + +   +    ++A PGF+N+ +      E++   +
Sbjct: 57   P---------PRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARL 107

Query: 592  -VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
              + +  P +     V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHV
Sbjct: 108  GTDRLGVPVVEDVAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHV 167

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            GDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+D+ F+  +   VV 
Sbjct: 168  GDWGTQFGMLITHLKQVAPETLDTADAVDLGDLVAFYREAKKRFDDDDDFQATSRDEVVK 227

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 768
            LQ  DP   KAW ++CD SRR+FQK+YDRL++ LTERGESFY  ++  ++  L+   LL 
Sbjct: 228  LQGGDPVSLKAWGLLCDQSRREFQKLYDRLDIRLTERGESFYNPYLPAVLDGLKAVDLLV 287

Query: 769  LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVY 819
             DDG + ++     G+D   +P+ + K DGGF Y T+DLAAIR R       + A  ++Y
Sbjct: 288  TDDGAQCVFLEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRFRFASPPTGDAAQRVIY 347

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
            VTD GQ  HF  + + A++AG + P+  R++ V FG+V GED KK KTR+GDTV+L +LL
Sbjct: 348  VTDAGQANHFAGVFQVAERAGWI-PDGARLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLL 406

Query: 880  DEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            DE + RS   L+ + +  E T ++  +S     V    +KYADLS NR  +Y FSFD+ML
Sbjct: 407  DEAVERSEQDLRSRLQEEERTESDAFISHVATTVGLAAVKYADLSQNRLTNYQFSFDRML 466

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
              +GNTA YLLYA  RIA IAR  G    DL V+  +  +     +E+AL + LL+ + V
Sbjct: 467  ALQGNTAPYLLYAVVRIAGIARKGG----DLGVS--NAALQFSEPQEWALVRELLKFDRV 520

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            ++ V  +L  + LC YL+++S  F+ FYD    ++ + E       + RL L   TA  +
Sbjct: 521  IVEVEDELLPNRLCSYLFELSQVFNRFYDQVPVLKAEPE-----ALSSRLALCRHTADTL 575

Query: 1058 KKCFDILNIRT 1068
            +    +L I T
Sbjct: 576  RCGLALLGIPT 586



 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/363 (42%), Positives = 217/363 (59%), Gaps = 29/363 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           +S+   L      A+Q AFP+     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2   LSLSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
                      + IA+ +  +L+ + +   +    ++A PGF+N+ +      E++   +
Sbjct: 57  P---------PRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARL 107

Query: 202 -VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
             + +  P +     V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHV
Sbjct: 108 GTDRLGVPVVEDVAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHV 167

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           GDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+D+ F+  +   VV 
Sbjct: 168 GDWGTQFGMLITHLKQVAPETLDTADAVDLGDLVAFYREAKKRFDDDDDFQATSRDEVVK 227

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 378
           LQ  DP   KAW ++CD SRR+FQK+YDRL++ LTERGESFY  ++  ++  L+   LL 
Sbjct: 228 LQGGDPVSLKAWGLLCDQSRREFQKLYDRLDIRLTERGESFYNPYLPAVLDGLKAVDLLV 287

Query: 379 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVY 429
            DDG + ++     G+D   +P+ + K DGGF Y T+DLAAIR R       + A  ++Y
Sbjct: 288 TDDGAQCVFLEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRFRFASPPTGDAAQRVIY 347

Query: 430 VTD 432
           VTD
Sbjct: 348 VTD 350



 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/363 (42%), Positives = 217/363 (59%), Gaps = 29/363 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            +S+   L      A+Q AFP+     D   + AS  E     FGDFQ N A+ L K  K 
Sbjct: 2    LSLSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPE-----FGDFQANGALPLAKPLKQ 56

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
                       + IA+ +  +L+ + +   +    ++A PGF+N+ +      E++   +
Sbjct: 57   P---------PRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARL 107

Query: 1219 -VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
              + +  P +     V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLNHV
Sbjct: 108  GTDRLGVPVVEDVAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHV 167

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            GDWGTQFGMLI HL+   P+ L  +  +   DL AFY+E+KKRFD+D+ F+  +   VV 
Sbjct: 168  GDWGTQFGMLITHLKQVAPETLDTADAVDLGDLVAFYREAKKRFDDDDDFQATSRDEVVK 227

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLE 1395
            LQ  DP   KAW ++CD SRR+FQK+YDRL++ LTERGESFY  ++  ++  L+   LL 
Sbjct: 228  LQGGDPVSLKAWGLLCDQSRREFQKLYDRLDIRLTERGESFYNPYLPAVLDGLKAVDLLV 287

Query: 1396 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVY 1446
             DDG + ++     G+D   +P+ + K DGGF Y T+DLAAIR R       + A  ++Y
Sbjct: 288  TDDGAQCVFLEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRFRFASPPTGDAAQRVIY 347

Query: 1447 VTD 1449
            VTD
Sbjct: 348  VTD 350


>gi|332307387|ref|YP_004435238.1| arginyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
 gi|332174716|gb|AEE23970.1| arginyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
          Length = 578

 Score =  405 bits (1040), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/567 (41%), Positives = 331/567 (58%), Gaps = 40/567 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+Q N AMAL K+ K K     P DIA  I + V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIADKIVAAV--------ELDGIAEKLEVAGPGF 82

Query: 574  VNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            +N++LS+ +   Q+ +   +    P LN    +   V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83   INIYLSKDWLATQLSEAAAD----PRLNIETQRSKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139  GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
             RFDE++ F  RA + VV LQ  D      W+   DVS    +++YD+LNV+LT     G
Sbjct: 199  VRFDEEDGFADRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVYDKLNVSLTRADIMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G ++++     +  G     IV KS GG+ Y T+D
Sbjct: 259  ESAYNHDLANVVSELQAKGLAVESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTD 318

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAA+R R ++  AD  + +TD  Q +HF+  E  A+KAG + P +T  +   FG++LG D
Sbjct: 319  LAAVRYRNKQLHADRTLILTDARQALHFKQTEIVARKAGFIEPEQT-YEHCPFGMMLGSD 377

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR+G TVKL ELLDE + R+   L    R T+L+  EL      +  G +KYADL
Sbjct: 378  GRPFKTRTGGTVKLVELLDEAVERAQALL--SKRETDLSTDELKVLANKIGIGAVKYADL 435

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+FS+D ML   GNTA YL YAYTR+ SI R AG++ + L  A     ++L+ 
Sbjct: 436  SKNRTTDYMFSWDSMLSFEGNTAPYLQYAYTRVMSIFRKAGVDHKTLNAA-----ITLDA 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
             +E  LA   L+  + +  V  +   H LC YLY++++ F  FY+ C  ++   EG    
Sbjct: 491  PQEKMLAVKQLQYVEAINQVIAEGTPHVLCTYLYELASLFMSFYEACPMLK---EGIAPE 547

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   R+ LA  TAK ++    +L I T
Sbjct: 548  VRDSRMTLAALTAKTLQSGLSLLGIDT 574



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/323 (42%), Positives = 193/323 (59%), Gaps = 29/323 (8%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+Q N AMAL K+ K K     P DIA  I + V         L  + +K+EVA PGF
Sbjct: 36  FGDYQFNGAMALAKVLKQK-----PRDIADKIVAAV--------ELDGIAEKLEVAGPGF 82

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           +N++LS+ +   Q+ +   +    P LN    +   V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83  INIYLSKDWLATQLSEAAAD----PRLNIETQRSKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139 GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
            RFDE++ F  RA + VV LQ  D      W+   DVS    +++YD+LNV+LT     G
Sbjct: 199 VRFDEEDGFADRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVYDKLNVSLTRADIMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G ++++     +  G     IV KS GG+ Y T+D
Sbjct: 259 ESAYNHDLANVVSELQAKGLAVESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTD 318

Query: 412 LAAIRQRIEEEKADWIVYVTDHR 434
           LAA+R R ++  AD  + +TD R
Sbjct: 319 LAAVRYRNKQLHADRTLILTDAR 341



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/323 (42%), Positives = 193/323 (59%), Gaps = 29/323 (8%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGD+Q N AMAL K+ K K     P DIA  I + V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIADKIVAAV--------ELDGIAEKLEVAGPGF 82

Query: 1201 VNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            +N++LS+ +   Q+ +   +    P LN    +   V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83   INIYLSKDWLATQLSEAAAD----PRLNIETQRSKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139  GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
             RFDE++ F  RA + VV LQ  D      W+   DVS    +++YD+LNV+LT     G
Sbjct: 199  VRFDEEDGFADRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVYDKLNVSLTRADIMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G ++++     +  G     IV KS GG+ Y T+D
Sbjct: 259  ESAYNHDLANVVSELQAKGLAVESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTD 318

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LAA+R R ++  AD  + +TD R
Sbjct: 319  LAAVRYRNKQLHADRTLILTDAR 341


>gi|13431882|sp|P57851.1|SYR_PASMU RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|12720817|gb|AAK02635.1| ArgS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 563

 Score =  405 bits (1040), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/584 (40%), Positives = 348/584 (59%), Gaps = 41/584 (7%)

Query: 497  GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATN 556
            G  T S A   +    +FGD+Q N  MA  K        +NP + AQ +   +       
Sbjct: 5    GADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPREFAQQVIEQL------- 52

Query: 557  PSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSS 612
              L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q     +   V+ D+SS
Sbjct: 53   -DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQA---TETQTVVADYSS 107

Query: 613  PNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL 672
            PN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +  
Sbjct: 108  PNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KVENES 166

Query: 673  TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 732
                 ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   +  W+ + D++ +  Q
Sbjct: 167  ASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMQQNQ 226

Query: 733  KIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPM 786
              YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G  +++ +   ++   PM
Sbjct: 227  HNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGAFVVYLDEFKNKEGEPM 286

Query: 787  TIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNP 844
             ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q  H +      +KAG + P
Sbjct: 287  GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQAWLITRKAGYV-P 345

Query: 845  NKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTEL 904
            +  +++   FG++LG+D K FKTR+G TVKL++LLDE + R+   +++K+  T L+  E 
Sbjct: 346  DSFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQLIQEKS--TALSAQEK 403

Query: 905  SEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGIN 964
            +   +AVA G +KYADLS NR  DYVF +D ML   GNTA Y+ YAYTRI SI   + +N
Sbjct: 404  AAVIEAVAIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSELN 463

Query: 965  SEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEF 1024
             +DL      +PV L +EKE  LA  LL+  + + +V ++   H LC YLY+++  FS F
Sbjct: 464  EQDL----SESPVVLSNEKERLLAIKLLQFEEAIQIVAKEGTPHVLCTYLYELAGVFSSF 519

Query: 1025 YDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            Y++C  +  + E     +   RL LA  T K +K+  D+L I+T
Sbjct: 520  YEHCPILNNEDE----QIKRSRLKLALLTEKTLKQGLDLLGIKT 559



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/414 (36%), Positives = 230/414 (55%), Gaps = 33/414 (7%)

Query: 107 GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATN 166
           G  T S A   +    +FGD+Q N  MA  K        +NP + AQ +   +       
Sbjct: 5   GADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPREFAQQVIEQL------- 52

Query: 167 PSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSS 222
             L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q     +   V+ D+SS
Sbjct: 53  -DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQA---TETQTVVADYSS 107

Query: 223 PNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL 282
           PN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +  
Sbjct: 108 PNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KVENES 166

Query: 283 TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 342
                ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   +  W+ + D++ +  Q
Sbjct: 167 ASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMQQNQ 226

Query: 343 KIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPM 396
             YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G  +++ +   ++   PM
Sbjct: 227 HNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGAFVVYLDEFKNKEGEPM 286

Query: 397 TIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISS 454
            ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    + QA     K   +  
Sbjct: 287 GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQAWLITRKAGYVPD 346

Query: 455 SSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 505
           S   + K     +     P + R      L+D+   AV+ A   + +K+ ++++
Sbjct: 347 SFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQLIQEKSTALSA 400



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/347 (39%), Positives = 204/347 (58%), Gaps = 30/347 (8%)

Query: 1124 GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATN 1183
            G  T S A   +    +FGD+Q N  MA  K        +NP + AQ +   +       
Sbjct: 5    GADTQSDALVRQSAKVQFGDYQANGIMAAAKKLG-----RNPREFAQQVIEQL------- 52

Query: 1184 PSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSS 1239
              L+++ +KIE+A PGF+N+FL + +  EQI  + VN    G+Q     +   V+ D+SS
Sbjct: 53   -DLSEIAEKIEIAGPGFINLFLDKNWLAEQIS-LAVNDDKLGIQA---TETQTVVADYSS 107

Query: 1240 PNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL 1299
            PN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +  
Sbjct: 108  PNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KVENES 166

Query: 1300 TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 1359
                 ++DL+AFY+ +K+ +D D +F ++A   VV LQ  D   +  W+ + D++ +  Q
Sbjct: 167  ASEMELSDLEAFYRAAKEHYDSDPVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMQQNQ 226

Query: 1360 KIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPM 1413
              YDRLNVTLTE+   GES Y   +  +V  L+++GL   D+G  +++ +   ++   PM
Sbjct: 227  HNYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGAFVVYLDEFKNKEGEPM 286

Query: 1414 TIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             ++  K DGGF Y T+D+AA + R E  KAD  +  +D R    + Q
Sbjct: 287  GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ 333


>gi|410647721|ref|ZP_11358140.1| arginyl-tRNA synthetase [Glaciecola agarilytica NO2]
 gi|410132628|dbj|GAC06539.1| arginyl-tRNA synthetase [Glaciecola agarilytica NO2]
          Length = 578

 Score =  405 bits (1040), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/567 (41%), Positives = 332/567 (58%), Gaps = 40/567 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+Q N AMAL K+ K K     P DIA  I + V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIADKIVAAV--------ELDGIAEKLEVAGPGF 82

Query: 574  VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 629
            +N++LS+ +   Q+ +   +    P LN + +    V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83   INIYLSKDWLATQLSEAAAD----PRLNIETQPSKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139  GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
             RFDE++ F  RA + VV LQ  D      W+   DVS    +++YD+LNV+LT     G
Sbjct: 199  VRFDEEDGFADRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVYDKLNVSLTRADIMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G ++++     +  G     IV KS GG+ Y T+D
Sbjct: 259  ESAYNHDLANVVSELQAKGLAVESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTD 318

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAA+R R ++  AD  + +TD  Q +HF+  E  A+KAG + P +T  +   FG++LG D
Sbjct: 319  LAAVRYRNKQLHADRTLILTDARQALHFKQTEIVARKAGFIEPEQT-YEHCPFGMMLGSD 377

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR+G TVKL ELLDE + R+   L    R T+L+  EL      +  G +KYADL
Sbjct: 378  GRPFKTRTGGTVKLVELLDEAVERAQALL--SKRETDLSTDELKVLANKIGIGAVKYADL 435

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+FS+D ML   GNTA YL YAYTR+ S+ R AG++ + L  A     ++L+ 
Sbjct: 436  SKNRTTDYMFSWDSMLSFEGNTAPYLQYAYTRVMSVFRKAGVDHQTLNAA-----ITLDA 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
             +E  LA   L+  + +  V  +   H LC YLY++++ F  FY+ C  ++   EG    
Sbjct: 491  PQEKMLAVKQLQYVEAINQVIAEGTPHVLCTYLYELASLFMSFYEACPMLK---EGIAPE 547

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   R+ LA  TAK ++    +L I T
Sbjct: 548  VRDSRMTLAALTAKTLQSGLSLLGIDT 574



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/323 (42%), Positives = 194/323 (60%), Gaps = 29/323 (8%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+Q N AMAL K+ K K     P DIA  I + V         L  + +K+EVA PGF
Sbjct: 36  FGDYQFNGAMALAKVLKQK-----PRDIADKIVAAV--------ELDGIAEKLEVAGPGF 82

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 239
           +N++LS+ +   Q+ +   +    P LN + +    V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83  INIYLSKDWLATQLSEAAAD----PRLNIETQPSKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139 GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
            RFDE++ F  RA + VV LQ  D      W+   DVS    +++YD+LNV+LT     G
Sbjct: 199 VRFDEEDGFADRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVYDKLNVSLTRADIMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G ++++     +  G     IV KS GG+ Y T+D
Sbjct: 259 ESAYNHDLANVVSELQAKGLAVESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTD 318

Query: 412 LAAIRQRIEEEKADWIVYVTDHR 434
           LAA+R R ++  AD  + +TD R
Sbjct: 319 LAAVRYRNKQLHADRTLILTDAR 341



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/323 (42%), Positives = 194/323 (60%), Gaps = 29/323 (8%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGD+Q N AMAL K+ K K     P DIA  I + V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIADKIVAAV--------ELDGIAEKLEVAGPGF 82

Query: 1201 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 1256
            +N++LS+ +   Q+ +   +    P LN + +    V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83   INIYLSKDWLATQLSEAAAD----PRLNIETQPSKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139  GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
             RFDE++ F  RA + VV LQ  D      W+   DVS    +++YD+LNV+LT     G
Sbjct: 199  VRFDEEDGFADRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVYDKLNVSLTRADIMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G ++++     +  G     IV KS GG+ Y T+D
Sbjct: 259  ESAYNHDLANVVSELQAKGLAVESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTD 318

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LAA+R R ++  AD  + +TD R
Sbjct: 319  LAAVRYRNKQLHADRTLILTDAR 341


>gi|410643050|ref|ZP_11353555.1| arginyl-tRNA synthetase [Glaciecola chathamensis S18K6]
 gi|410137399|dbj|GAC11742.1| arginyl-tRNA synthetase [Glaciecola chathamensis S18K6]
          Length = 578

 Score =  405 bits (1040), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/567 (41%), Positives = 332/567 (58%), Gaps = 40/567 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+Q N AMAL K+ K K     P DIA  I + V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIADKIVAAV--------ELDGIAEKLEVAGPGF 82

Query: 574  VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 629
            +N++LS+ +   Q+ +   +    P LN + +    V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83   INIYLSKDWLATQLSEAAAD----PRLNIETQPSKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139  GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
             RFDE++ F  RA + VV LQ  D      W+   DVS    +++YD+LNV+LT     G
Sbjct: 199  VRFDEEDGFADRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVYDKLNVSLTRADIMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G ++++     +  G     IV KS GG+ Y T+D
Sbjct: 259  ESAYNHDLANVVSELQAKGLAVESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTD 318

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAA+R R ++  AD  + +TD  Q +HF+  E  A+KAG + P +T  +   FG++LG D
Sbjct: 319  LAAVRYRNKQLHADRTLILTDARQALHFKQTEIVARKAGFIEPEQT-YEHCPFGMMLGSD 377

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR+G TVKL ELLDE + R+   L    R T+L+  EL      +  G +KYADL
Sbjct: 378  GRPFKTRTGGTVKLVELLDEAVERAQALL--SKRETDLSTDELKVLANKIGIGAVKYADL 435

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+FS+D ML   GNTA YL YAYTR+ SI R AG++ + L  A     ++L+ 
Sbjct: 436  SKNRTTDYMFSWDSMLSFEGNTAPYLQYAYTRVMSIFRKAGVDHKTLNAA-----ITLDA 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
             +E  LA   L+  + +  V  +   H LC YLY++++ F  FY+ C  ++   EG    
Sbjct: 491  PQEKMLAVKQLQYVEAINQVIAEGTPHVLCTYLYELASLFMSFYEACPMLK---EGIAPE 547

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   R+ LA  TAK ++    +L I T
Sbjct: 548  VRDSRMTLAALTAKTLQSGLSLLGIDT 574



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/323 (42%), Positives = 194/323 (60%), Gaps = 29/323 (8%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+Q N AMAL K+ K K     P DIA  I + V         L  + +K+EVA PGF
Sbjct: 36  FGDYQFNGAMALAKVLKQK-----PRDIADKIVAAV--------ELDGIAEKLEVAGPGF 82

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 239
           +N++LS+ +   Q+ +   +    P LN + +    V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83  INIYLSKDWLATQLSEAAAD----PRLNIETQPSKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139 GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
            RFDE++ F  RA + VV LQ  D      W+   DVS    +++YD+LNV+LT     G
Sbjct: 199 VRFDEEDGFADRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVYDKLNVSLTRADIMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G ++++     +  G     IV KS GG+ Y T+D
Sbjct: 259 ESAYNHDLANVVSELQAKGLAVESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTD 318

Query: 412 LAAIRQRIEEEKADWIVYVTDHR 434
           LAA+R R ++  AD  + +TD R
Sbjct: 319 LAAVRYRNKQLHADRTLILTDAR 341



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/323 (42%), Positives = 194/323 (60%), Gaps = 29/323 (8%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGD+Q N AMAL K+ K K     P DIA  I + V         L  + +K+EVA PGF
Sbjct: 36   FGDYQFNGAMALAKVLKQK-----PRDIADKIVAAV--------ELDGIAEKLEVAGPGF 82

Query: 1201 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 1256
            +N++LS+ +   Q+ +   +    P LN + +    V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83   INIYLSKDWLATQLSEAAAD----PRLNIETQPSKTVVVDYSSPNLAKEMHVGHLRTTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+E+K
Sbjct: 139  GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
             RFDE++ F  RA + VV LQ  D      W+   DVS    +++YD+LNV+LT     G
Sbjct: 199  VRFDEEDGFADRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVYDKLNVSLTRADIMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G ++++     +  G     IV KS GG+ Y T+D
Sbjct: 259  ESAYNHDLANVVSELQAKGLAVESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTD 318

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LAA+R R ++  AD  + +TD R
Sbjct: 319  LAAVRYRNKQLHADRTLILTDAR 341


>gi|294635811|ref|ZP_06714268.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|451964548|ref|ZP_21917812.1| arginyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
 gi|291090846|gb|EFE23407.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|451316668|dbj|GAC63174.1| arginyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
          Length = 577

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 240/608 (39%), Positives = 341/608 (56%), Gaps = 49/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  +SD  T A+  A    G    S A        +FGD+Q N  MA  K       
Sbjct: 1    MNIQALISDKVTQALVAA----GAPADSEALVRPSAKVQFGDYQANGIMAAAKKMA---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ + +        N +L  +  K+E+A PGF+N+FL   +  +Q+   +   
Sbjct: 53   -MPPRQLAEQVVA--------NLALDGIASKVEIAGPGFINIFLDAAWLADQVDAALADP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVARVAPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+    +       +ADL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLERVQSESQAGEMALADLEAFYREAKKHYDEDAAFAERARGYVVK 217

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++ R  Q+ YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 218  LQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 766  LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   A+ I+Y 
Sbjct: 278  LATESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLGANRILYY 337

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTR+G T+KL++LLD
Sbjct: 338  IDSRQHQHLMQAWAIVRKAGYV-PESVSLEHHMFGMMLGKDGKPFKTRAGGTIKLADLLD 396

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   + DKN   EL+  EL E  + V  G +KYADLS NR  DY+F +D ML   
Sbjct: 397  EATERAAKLIADKN--PELSGDELKELVEVVGIGAVKYADLSKNRTTDYIFDWDNMLAFE 454

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ASI + AGI+   L     S  V L  E+E ALA  L++  + ++ 
Sbjct: 455  GNTAPYMQYAYTRVASIFKRAGIDENSL-----SGAVILTEEREKALATRLMQFEETILT 509

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLY+++  FS FY+ C  +  D E     V   RL LA  TA+ +K  
Sbjct: 510  VAREGTPHVMCAYLYEVAGLFSSFYEACPILNADDE----HVRASRLKLAALTARTLKTG 565

Query: 1061 FDILNIRT 1068
             D L I+T
Sbjct: 566  LDTLGIKT 573



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/438 (35%), Positives = 230/438 (52%), Gaps = 40/438 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  +SD  T A+  A    G    S A        +FGD+Q N  MA  K       
Sbjct: 1   MNIQALISDKVTQALVAA----GAPADSEALVRPSAKVQFGDYQANGIMAAAKKMA---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ + +        N +L  +  K+E+A PGF+N+FL   +  +Q+   +   
Sbjct: 53  -MPPRQLAEQVVA--------NLALDGIASKVEIAGPGFINIFLDAAWLADQVDAALADP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 RLGVARVAPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+    +       +ADL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLERVQSESQAGEMALADLEAFYREAKKHYDEDAAFAERARGYVVK 217

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++ R  Q+ YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 218 LQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 376 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   A+ I+Y 
Sbjct: 278 LATESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLGANRILYY 337

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTH 487
            D R +  ++QA A   K   +  S S +       +     P + R      L+D+   
Sbjct: 338 IDSRQHQHLMQAWAIVRKAGYVPESVSLEHHMFGMMLGKDGKPFKTRAGGTIKLADLLDE 397

Query: 488 AVQVAFPELGDKTASVAS 505
           A + A   + DK   ++ 
Sbjct: 398 ATERAAKLIADKNPELSG 415



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/371 (38%), Positives = 207/371 (55%), Gaps = 37/371 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  +SD  T A+  A    G    S A        +FGD+Q N  MA  K       
Sbjct: 1    MNIQALISDKVTQALVAA----GAPADSEALVRPSAKVQFGDYQANGIMAAAKKMA---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ + +        N +L  +  K+E+A PGF+N+FL   +  +Q+   +   
Sbjct: 53   -MPPRQLAEQVVA--------NLALDGIASKVEIAGPGFINIFLDAAWLADQVDAALADP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVARVAPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+    +       +ADL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLERVQSESQAGEMALADLEAFYREAKKHYDEDAAFAERARGYVVK 217

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++ R  Q+ YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 218  LQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 1393 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   A+ I+Y 
Sbjct: 278  LATESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLGANRILYY 337

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 338  IDSRQHQHLMQ 348


>gi|113461098|ref|YP_719166.1| arginyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123132089|sp|Q0I3B0.1|SYR_HAES1 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|112823141|gb|ABI25230.1| arginyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 577

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/564 (41%), Positives = 337/564 (59%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA  K         NP D AQ +  ++         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMATAKKLG-----LNPRDFAQKVLDLI--------DLKNIAEKMEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL + +  E I+  + +     T+ +   ++VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDKNWLAENIQVTLQDKKLGVTVEEIQTIVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ K  +    +  +ADL+AFY+ +K+ +
Sbjct: 142  VVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLE-KMENEHASAMELADLEAFYRAAKEHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            D DE F ++A   VV LQ  D   +  W+ + D++ +  Q+ YDRLNVTLT+    GES 
Sbjct: 201  DNDETFAEKARNYVVKLQNGDAYCRTMWKKLVDITMQQNQRNYDRLNVTLTQNDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   D+G ++++ E   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 261  YNPMLPEIVADLKAQGLAVEDEGAQVVYLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R    KAD  +  +D  Q  H +      +KAG + P+  +++   FG++LG+D K 
Sbjct: 321  AKYRYHTLKADRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSG TVKL++LLDE + R+ DKL  + + T L+  E +   +AV  G +KYADLS N
Sbjct: 380  FKTRSGGTVKLTDLLDEAIERA-DKLISE-KSTALSSKEKAAVIEAVGIGSVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI     I+ E L  A     + L  EKE
Sbjct: 438  RTTDYVFDWDIMLSFEGNTAPYMQYAYTRIRSIFNKTDISEEQLHPA----KIQLTDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+  + + +V ++   H LC YLY+++  FS FY++C  +  D E     V  
Sbjct: 494  RLLAIKLLQFEETVQIVGKEGTPHILCAYLYELAGLFSSFYEHCPILNNDNE----NVKL 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T K +K+  D+L I+T
Sbjct: 550  SRLKLALLTEKTLKQGLDLLGIKT 573



 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 144/394 (36%), Positives = 224/394 (56%), Gaps = 25/394 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA  K         NP D AQ +  ++         L  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMATAKKLG-----LNPRDFAQKVLDLI--------DLKNIAEKMEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL + +  E I+  + +     T+ +   ++VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDKNWLAENIQVTLQDKKLGVTVEEIQTIVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ K  +    +  +ADL+AFY+ +K+ +
Sbjct: 142 VVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLE-KMENEHASAMELADLEAFYRAAKEHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           D DE F ++A   VV LQ  D   +  W+ + D++ +  Q+ YDRLNVTLT+    GES 
Sbjct: 201 DNDETFAEKARNYVVKLQNGDAYCRTMWKKLVDITMQQNQRNYDRLNVTLTQNDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   D+G ++++ E   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 261 YNPMLPEIVADLKAQGLAVEDEGAQVVYLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R    KAD  +  +D R    + QA     K   +  S   + K     +     P 
Sbjct: 321 AKYRYHTLKADRALVFSDTRQSQHMQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPF 380

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 505
           + R      L+D+   A++ A   + +K+ +++S
Sbjct: 381 KTRSGGTVKLTDLLDEAIERADKLISEKSTALSS 414



 Score =  246 bits (627), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 198/327 (60%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA  K         NP D AQ +  ++         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMATAKKLG-----LNPRDFAQKVLDLI--------DLKNIAEKMEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL + +  E I+  + +     T+ +   ++VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDKNWLAENIQVTLQDKKLGVTVEEIQTIVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ K  +    +  +ADL+AFY+ +K+ +
Sbjct: 142  VVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLE-KMENEHASAMELADLEAFYRAAKEHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            D DE F ++A   VV LQ  D   +  W+ + D++ +  Q+ YDRLNVTLT+    GES 
Sbjct: 201  DNDETFAEKARNYVVKLQNGDAYCRTMWKKLVDITMQQNQRNYDRLNVTLTQNDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   D+G ++++ E   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 261  YNPMLPEIVADLKAQGLAVEDEGAQVVYLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R    KAD  +  +D R    + Q
Sbjct: 321  AKYRYHTLKADRALVFSDTRQSQHMQQ 347


>gi|402306058|ref|ZP_10825110.1| arginine--tRNA ligase [Haemophilus sputorum HK 2154]
 gi|400375473|gb|EJP28372.1| arginine--tRNA ligase [Haemophilus sputorum HK 2154]
          Length = 575

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 250/610 (40%), Positives = 355/610 (58%), Gaps = 55/610 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+  A    G    + A   +    +FGD+Q N AM   K       
Sbjct: 1    MNIQQILSDKIKQAMIAA----GADENAEALVRQSGKPEFGDYQANGAMGAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ I          N +L  + +K+E+A PGF+N+FLS        KD + NG
Sbjct: 53   -INPREFAQKILD--------NLNLDGIAEKLEIAGPGFINIFLS--------KDWLANG 95

Query: 595  VQPP--TLNKKLR------VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
                   +N  ++      ++VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG++V+R
Sbjct: 96   ANSALQAVNFGIKTENPQTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIR 155

Query: 647  LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 706
             NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K  +DED  F ++A   V
Sbjct: 156  ANHVGDWGTQFGMLIAYLE-KMENENASQLELSDLEAFYRAAKAHYDEDAAFAEKARGYV 214

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEK 763
            V LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   GES Y   + ++V  L+ 
Sbjct: 215  VKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKA 274

Query: 764  KGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIV 818
            KGL   DDG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KAD  +
Sbjct: 275  KGLAVEDDGALVVFLSEFKNKDGDPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRAL 334

Query: 819  YVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSEL 878
              +D  Q  H +      +KAG + P+   ++   FG++LG+D K FKTRSGDTVKL +L
Sbjct: 335  VFSDSRQAQHMQQAWLITRKAGYV-PDSFSLEHPFFGMMLGKDGKPFKTRSGDTVKLKDL 393

Query: 879  LDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            LDE + R+ D L  + R T LT  E +   +AVA G +KYADLS NR  DYVF +D ML 
Sbjct: 394  LDEAIERA-DALISQ-RSTNLTEEEKAAVVEAVAIGSVKYADLSKNRTTDYVFDWDNMLS 451

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
              GNTA Y+ YAYTRI S+   AGI+   L     S  + L  +KE ALA  LL+  + L
Sbjct: 452  FEGNTAPYMQYAYTRIRSVFAKAGIDPSTL-----SGEIILTEDKERALAIKLLQFEEAL 506

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
              V ++   H LC+YLY+++ AFS FY+ C  +  +AE K+K     RL L++ TA+ +K
Sbjct: 507  NSVAKEGMPHILCQYLYELAGAFSSFYEACPML--NAEEKVK---NSRLRLSDLTARTLK 561

Query: 1059 KCFDILNIRT 1068
            +  D+L I+T
Sbjct: 562  QGLDLLGIKT 571



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 146/374 (39%), Positives = 211/374 (56%), Gaps = 42/374 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+  A    G    + A   +    +FGD+Q N AM   K       
Sbjct: 1   MNIQQILSDKIKQAMIAA----GADENAEALVRQSGKPEFGDYQANGAMGAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ I          N +L  + +K+E+A PGF+N+FLS        KD + NG
Sbjct: 53  -INPREFAQKILD--------NLNLDGIAEKLEIAGPGFINIFLS--------KDWLANG 95

Query: 205 VQPP--TLNKKLR------VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
                  +N  ++      ++VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG++V+R
Sbjct: 96  ANSALQAVNFGIKTENPQTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIR 155

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
            NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K  +DED  F ++A   V
Sbjct: 156 ANHVGDWGTQFGMLIAYLE-KMENENASQLELSDLEAFYRAAKAHYDEDAAFAEKARGYV 214

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEK 373
           V LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   GES Y   + ++V  L+ 
Sbjct: 215 VKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKA 274

Query: 374 KGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIV 428
           KGL   DDG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KAD  +
Sbjct: 275 KGLAVEDDGALVVFLSEFKNKDGDPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRAL 334

Query: 429 YVTDHRSYHQVLQA 442
             +D R    + QA
Sbjct: 335 VFSDSRQAQHMQQA 348



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/373 (38%), Positives = 210/373 (56%), Gaps = 42/373 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+  A    G    + A   +    +FGD+Q N AM   K       
Sbjct: 1    MNIQQILSDKIKQAMIAA----GADENAEALVRQSGKPEFGDYQANGAMGAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ I          N +L  + +K+E+A PGF+N+FLS        KD + NG
Sbjct: 53   -INPREFAQKILD--------NLNLDGIAEKLEIAGPGFINIFLS--------KDWLANG 95

Query: 1222 VQPP--TLNKKLR------VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
                   +N  ++      ++VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG++V+R
Sbjct: 96   ANSALQAVNFGIKTENPQTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIR 155

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
             NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K  +DED  F ++A   V
Sbjct: 156  ANHVGDWGTQFGMLIAYLE-KMENENASQLELSDLEAFYRAAKAHYDEDAAFAEKARGYV 214

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEK 1390
            V LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   GES Y   + ++V  L+ 
Sbjct: 215  VKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKA 274

Query: 1391 KGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIV 1445
            KGL   DDG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KAD  +
Sbjct: 275  KGLAVEDDGALVVFLSEFKNKDGDPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRAL 334

Query: 1446 YVTDHRSYHQVLQ 1458
              +D R    + Q
Sbjct: 335  VFSDSRQAQHMQQ 347


>gi|170717675|ref|YP_001784750.1| arginyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083536|sp|B0UUF1.1|SYR_HAES2 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|168825804|gb|ACA31175.1| arginyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 577

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/564 (41%), Positives = 337/564 (59%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA  K         NP D AQ +  ++         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMATAKKLG-----LNPRDFAQKVLDLI--------DLKNIAEKMEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL + +  E I+  + +     T+ +   ++VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDKNWLAENIQVTLQDKKLGVTVEEIQTIVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ K  +    +  +ADL+AFY+ +K+ +
Sbjct: 142  VVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLE-KMENEHASAMELADLEAFYRAAKEHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            D DE F ++A   VV LQ  D   +  W+ + D++ +  Q+ YDRLNVTLT+    GES 
Sbjct: 201  DNDETFAEKARNYVVKLQNGDAYCRTMWKKLVDITMQQNQRNYDRLNVTLTQNDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   D+G ++++ E   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 261  YNPMLPEIVADLKAQGLAVEDEGAQVVYLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R    KAD  +  +D  Q  H +      +KAG + P+  +++   FG++LG+D K 
Sbjct: 321  AKYRYHTLKADRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSG TVKL++LLDE + R+ DKL  + + T L+  E +   +AV  G +KYADLS N
Sbjct: 380  FKTRSGGTVKLTDLLDEAIERA-DKLISE-KSTALSSKEKAAVIEAVGIGSVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI     I+ E L  A     + L  EKE
Sbjct: 438  RTTDYVFDWDIMLSFEGNTAPYMQYAYTRIRSIFNKTDISEEQLHPA----KIQLTDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+  + + +V ++   H LC YLY+++  FS FY++C  +  D E     V  
Sbjct: 494  RLLAIKLLQFEETVQIVGKEGTPHILCAYLYELAGLFSSFYEHCPILNNDNE----NVKL 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T K +K+  D+L I+T
Sbjct: 550  SRLKLALLTEKTLKQGLDLLGIKT 573



 Score =  249 bits (637), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 144/394 (36%), Positives = 224/394 (56%), Gaps = 25/394 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA  K         NP D AQ +  ++         L  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMATAKKLG-----LNPRDFAQKVLDLI--------DLKNIAEKMEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL + +  E I+  + +     T+ +   ++VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDKNWLAENIQVTLQDKKLGVTVEEIQTIVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ K  +    +  +ADL+AFY+ +K+ +
Sbjct: 142 VVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLE-KMENEHASAMELADLEAFYRAAKEHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           D DE F ++A   VV LQ  D   +  W+ + D++ +  Q+ YDRLNVTLT+    GES 
Sbjct: 201 DNDETFAEKARNYVVKLQNGDAYCRTMWKKLVDITMQQNQRNYDRLNVTLTQNDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   D+G ++++ E   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 261 YNPMLPEIVADLKAQGLAVEDEGAQVVYLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R    KAD  +  +D R    + QA     K   +  S   + K     +     P 
Sbjct: 321 AKYRYHTLKADRALVFSDTRQSQHMQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPF 380

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 505
           + R      L+D+   A++ A   + +K+ +++S
Sbjct: 381 KTRSGGTVKLTDLLDEAIERADKLISEKSTALSS 414



 Score =  246 bits (627), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 198/327 (60%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA  K         NP D AQ +  ++         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMATAKKLG-----LNPRDFAQKVLDLI--------DLKNIAEKMEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL + +  E I+  + +     T+ +   ++VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDKNWLAENIQVTLQDKKLGVTVEEIQTIVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ K  +    +  +ADL+AFY+ +K+ +
Sbjct: 142  VVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLE-KMENEHASAMELADLEAFYRAAKEHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            D DE F ++A   VV LQ  D   +  W+ + D++ +  Q+ YDRLNVTLT+    GES 
Sbjct: 201  DNDETFAEKARNYVVKLQNGDAYCRTMWKKLVDITMQQNQRNYDRLNVTLTQNDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   D+G ++++ E   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 261  YNPMLPEIVADLKAQGLAVEDEGAQVVYLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R    KAD  +  +D R    + Q
Sbjct: 321  AKYRYHTLKADRALVFSDTRQSQHMQQ 347


>gi|319897254|ref|YP_004135449.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432758|emb|CBY81123.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 577

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 240/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             RS   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERSTVLINEKN--TNLSNDEKEAVIKAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/443 (35%), Positives = 245/443 (55%), Gaps = 35/443 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYVHK 513
            +   + +K  ++++  ++ V K
Sbjct: 400 RSTVLINEKNTNLSNDEKEAVIK 422



 Score =  248 bits (632), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|89898642|ref|YP_515752.1| arginyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|109894981|sp|Q253D1.1|SYR_CHLFF RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|89332014|dbj|BAE81607.1| arginyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 562

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/594 (39%), Positives = 354/594 (59%), Gaps = 36/594 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++  YLS +   A   AFP++ + +  +  + +++   FG +QCNDAM L     D+  
Sbjct: 1    MTLLSYLSSLCREATLSAFPQVENPSPDITQSTKEH---FGHYQCNDAMKL-----DRTL 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K  P  IA++I + +  +             +EVA  GF+N   S+ +  ++++    + 
Sbjct: 53   KMAPRAIAEAIVNNLPKD---------NFSSVEVAGAGFINFTFSKEFLKQRLETFSADL 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                 +    ++++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104  SSGFCVKDPKKIVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFSFVGNDVLRLNHIGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            T FGMLI +LQ++  + +     + DL A YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164  TAFGMLITYLQEEASEDVGN---LEDLTALYKKAHARFAEDVEFKKRSQANVVALQSGDP 220

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
                 W+ IC++S R FQKIYD L V + +RGESFY   + +++  LE K L+ + D  K
Sbjct: 221  SALNLWKHICEISERAFQKIYDILGVAIEKRGESFYNPFLPEIIQDLENKKLITVSDNAK 280

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
             ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E++ AD I+ VTD+GQ +HF+LLE 
Sbjct: 281  CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEKDHADKIIIVTDMGQSLHFQLLEA 339

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             A  AG L  +K     VGFG+VL  + KKFKTRSG+ +KL ELL+  + +++  LK+  
Sbjct: 340  TALAAGYLR-DKETFSHVGFGLVLDSEGKKFKTRSGENIKLKELLNTAVDQAVATLKE-- 396

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
               E++  E+S+    +    IKYADLS +R  DYVFSF+KML   GNTA++LLYAY RI
Sbjct: 397  HRPEMSEEEISQRAPILGINAIKYADLSSHRVSDYVFSFEKMLRFEGNTAMFLLYAYVRI 456

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
              I R   +N E L + A    V+++   E ALA  LLR  + + +  ++LC H L +YL
Sbjct: 457  QGIKRR--LNIEKLNLEA---VVNIQEPAEEALALALLRFPEAIDVTLKELCPHFLTDYL 511

Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            Y ++  F+ F+ +C+      EG        RL L     K +     +L ++T
Sbjct: 512  YMLTNKFNAFFRDCHI-----EG--SPYQQERLYLCALVEKTLATGMHLLGLQT 558



 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 147/362 (40%), Positives = 223/362 (61%), Gaps = 23/362 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++  YLS +   A   AFP++ + +  +  + +++   FG +QCNDAM L     D+  
Sbjct: 1   MTLLSYLSSLCREATLSAFPQVENPSPDITQSTKEH---FGHYQCNDAMKL-----DRTL 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
           K  P  IA++I + +  +             +EVA  GF+N   S+ +  ++++    + 
Sbjct: 53  KMAPRAIAEAIVNNLPKD---------NFSSVEVAGAGFINFTFSKEFLKQRLETFSADL 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                +    ++++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104 SSGFCVKDPKKIVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFSFVGNDVLRLNHIGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           T FGMLI +LQ++  + +     + DL A YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164 TAFGMLITYLQEEASEDVGN---LEDLTALYKKAHARFAEDVEFKKRSQANVVALQSGDP 220

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
                W+ IC++S R FQKIYD L V + +RGESFY   + +++  LE K L+ + D  K
Sbjct: 221 SALNLWKHICEISERAFQKIYDILGVAIEKRGESFYNPFLPEIIQDLENKKLITVSDNAK 280

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQA 442
            ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E++ AD I+ VTD  +S H Q+L+A
Sbjct: 281 CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEKDHADKIIIVTDMGQSLHFQLLEA 339

Query: 443 IA 444
            A
Sbjct: 340 TA 341



 Score =  266 bits (680), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 141/348 (40%), Positives = 214/348 (61%), Gaps = 21/348 (6%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++  YLS +   A   AFP++ + +  +  + +++   FG +QCNDAM L     D+  
Sbjct: 1    MTLLSYLSSLCREATLSAFPQVENPSPDITQSTKEH---FGHYQCNDAMKL-----DRTL 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K  P  IA++I + +  +             +EVA  GF+N   S+ +  ++++    + 
Sbjct: 53   KMAPRAIAEAIVNNLPKD---------NFSSVEVAGAGFINFTFSKEFLKQRLETFSADL 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                 +    ++++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104  SSGFCVKDPKKIVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFSFVGNDVLRLNHIGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            T FGMLI +LQ++  + +     + DL A YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164  TAFGMLITYLQEEASEDVGN---LEDLTALYKKAHARFAEDVEFKKRSQANVVALQSGDP 220

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
                 W+ IC++S R FQKIYD L V + +RGESFY   + +++  LE K L+ + D  K
Sbjct: 221  SALNLWKHICEISERAFQKIYDILGVAIEKRGESFYNPFLPEIIQDLENKKLITVSDNAK 280

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E++ AD I+ VTD
Sbjct: 281  CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEKDHADKIIIVTD 327


>gi|325578263|ref|ZP_08148398.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159999|gb|EGC72128.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 577

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/602 (39%), Positives = 346/602 (57%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+  A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMIAA----GADEQCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ +          +  L+ V +K E+A PGF+N+FL+  +    +   + + 
Sbjct: 53   -LNPREFAQKVLD--------HADLSDVAEKTEIAGPGFINIFLNPTWLANNVSAALKDQ 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                + N+K  +++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGVSANEKQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMENEHASEMELQDLEAFYREAKKHYDEDEAFAEKARNYVVKLQGGDE 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
              +  W+ + D++ +  Q+ YDRLNVTLTE+   GES Y   +  +V  L+K+GL   D+
Sbjct: 223  YCRTMWKKLVDITMQQNQRNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLAVEDE 282

Query: 772  GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D  Q 
Sbjct: 283  GALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE + R+
Sbjct: 343  QHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               + +KN  T L+  E +   +AV  G +KYADLS NR  DYVF +D ML   GNTA Y
Sbjct: 402  TVLINEKN--TNLSDEEKTAVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLSFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTRI SI   A +N   L  A     + L  EKE ALA  LL+  + +  V ++  
Sbjct: 460  MQYAYTRIRSIFNKADVNPTALAEA----KIQLSDEKERALAIKLLQFEEAVQTVGKEGT 515

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLY+++  FS FY++C  +  + E     V   RL LA  T K +K+   +L I
Sbjct: 516  PHVLCAYLYELAGIFSSFYEHCPILNAEDE----NVKLSRLKLASLTEKTLKQGLALLGI 571

Query: 1067 RT 1068
            +T
Sbjct: 572  KT 573



 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/431 (35%), Positives = 235/431 (54%), Gaps = 29/431 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+  A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMIAA----GADEQCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ +          +  L+ V +K E+A PGF+N+FL+  +    +   + + 
Sbjct: 53  -LNPREFAQKVLD--------HADLSDVAEKTEIAGPGFINIFLNPTWLANNVSAALKDQ 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
               + N+K  +++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104 NLGVSANEKQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE F ++A   VV LQ  D 
Sbjct: 164 TQFGMLIAYLE-KMENEHASEMELQDLEAFYREAKKHYDEDEAFAEKARNYVVKLQGGDE 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
             +  W+ + D++ +  Q+ YDRLNVTLTE+   GES Y   +  +V  L+K+GL   D+
Sbjct: 223 YCRTMWKKLVDITMQQNQRNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLAVEDE 282

Query: 382 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283 GALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 437 HQVLQAIAEEEKKQGISSSSSSQTKGTA---KKMNVPVRDRMSVRDYLSDVFTHAVQVAF 493
             + QA     K   +  S S + K       K   P + R      L+D+   A++ A 
Sbjct: 343 QHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIERAT 402

Query: 494 PELGDKTASVA 504
             + +K  +++
Sbjct: 403 VLINEKNTNLS 413



 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/365 (38%), Positives = 210/365 (57%), Gaps = 26/365 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+  A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMIAA----GADEQCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ +          +  L+ V +K E+A PGF+N+FL+  +    +   + + 
Sbjct: 53   -LNPREFAQKVLD--------HADLSDVAEKTEIAGPGFINIFLNPTWLANNVSAALKDQ 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                + N+K  +++D+SSPN+AKEMHVGHLRSTIIGD + R LE+LGH+V+R NHVGDWG
Sbjct: 104  NLGVSANEKQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE F ++A   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMENEHASEMELQDLEAFYREAKKHYDEDEAFAEKARNYVVKLQGGDE 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
              +  W+ + D++ +  Q+ YDRLNVTLTE+   GES Y   +  +V  L+K+GL   D+
Sbjct: 223  YCRTMWKKLVDITMQQNQRNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLAVEDE 282

Query: 1399 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D R  
Sbjct: 283  GALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQS 342

Query: 1454 HQVLQ 1458
              + Q
Sbjct: 343  QHMQQ 347


>gi|145635709|ref|ZP_01791404.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267032|gb|EDK07041.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 577

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/605 (39%), Positives = 352/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHANEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML    NT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFESNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS     A  + P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINS----TALLAVPLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/441 (36%), Positives = 244/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHANEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/368 (39%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHANEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|68249833|ref|YP_248945.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335742|sp|Q4QL12.1|SYR_HAEI8 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|68058032|gb|AAX88285.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 577

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMVIA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LL+E +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLNEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +A+  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKQAVIEAIGIGSVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAENE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/441 (35%), Positives = 244/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMVIA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLNEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKQAV 420



 Score =  249 bits (636), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMVIA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|148828426|ref|YP_001293179.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166232792|sp|A5UJ40.1|SYR_HAEIG RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|148719668|gb|ABR00796.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 577

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/605 (39%), Positives = 355/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+    ++ ++   + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLEKMQHEHASEM-ELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G T+KL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTIKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/441 (35%), Positives = 246/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+    ++ ++   + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLEKMQHEHASEM-ELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTIKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  248 bits (632), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 217/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+    ++ ++   + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLEKMQHEHASEM-ELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|319776477|ref|YP_004138965.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123983|ref|ZP_08252530.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317451068|emb|CBY87301.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327467408|gb|EGF12906.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 577

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  +A  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIIAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGNPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             RS   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERSTVLINEKN--TNLSNDEKEAVIKAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/443 (35%), Positives = 245/443 (55%), Gaps = 35/443 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  +A  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIIAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKDGNPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYVHK 513
            +   + +K  ++++  ++ V K
Sbjct: 400 RSTVLINEKNTNLSNDEKEAVIK 422



 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  +A  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIIAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGNPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|145632971|ref|ZP_01788704.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|386266018|ref|YP_005829510.1| arginyl-tRNA synthetase [Haemophilus influenzae R2846]
 gi|144986627|gb|EDJ93193.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|309973254|gb|ADO96455.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 577

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G T+KL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTIKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAENE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/441 (35%), Positives = 244/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTIKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|229845606|ref|ZP_04465732.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811473|gb|EEP47176.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 577

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRMMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G T+KL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTIKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAENE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/441 (35%), Positives = 244/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRMMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTIKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y+RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRMMWKRLVDITMQQNQHNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|420258260|ref|ZP_14760998.1| arginyl-tRNA ligase [Yersinia enterocolitica subsp. enterocolitica
            WA-314]
 gi|404514234|gb|EKA28031.1| arginyl-tRNA ligase [Yersinia enterocolitica subsp. enterocolitica
            WA-314]
          Length = 576

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 236/608 (38%), Positives = 348/608 (57%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAIAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIASKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAIERAGKLIAEKN--PDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ S+ + AGI+  +L     + P+ +  ++E ALA  LL+  +V+  
Sbjct: 454  GNTAPYMQYAYTRVVSVFKRAGIDESNL-----TLPLVITEDREAALATRLLQFEEVITT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  D+E   ++    RL LA  TAK +K+ 
Sbjct: 509  VAREGTPHVMCSYLYDLAGLFSSFYEHCQILNADSEESRQS----RLKLAMLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             D L I+T
Sbjct: 565  LDTLGIQT 572



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/372 (37%), Positives = 209/372 (56%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAIAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53  -MQPRQLAEKVIELL--------DLDGIASKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104 KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220 GDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280 ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 140/371 (37%), Positives = 208/371 (56%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAIAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIASKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|421079122|ref|ZP_15540067.1| Arginine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
 gi|401706309|gb|EJS96487.1| Arginine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
          Length = 576

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/611 (38%), Positives = 346/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT +   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMAQNQINYERLNVTLTTQDVMGESLYNNMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  + +KN   E    EL    + V+ G IKYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAYDRALKLIAEKNPQME--RDELEALAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + AGI  + L     + P++L  E+EFALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVASIFKRAGIQEDTL-----TQPITLNDEREFALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  + +     V   RL LA  TAK +
Sbjct: 506  ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAETD----DVRQSRLRLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I T
Sbjct: 562  KQGLDTLGIET 572



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/375 (36%), Positives = 210/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53  -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT +   GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMAQNQINYERLNVTLTTQDVMGESLYNNMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/374 (36%), Positives = 209/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT +   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMAQNQINYERLNVTLTTQDVMGESLYNNMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|309751074|gb|ADO81058.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 577

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+    ++ ++   + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLEKMQHEHASEM-ELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQYNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 769  LDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLYEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKESVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E     V   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDEA----VKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 156/441 (35%), Positives = 245/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+    ++ ++   + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLEKMQHEHASEM-ELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQYNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 379 LDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLYEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKESV 420



 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 216/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+    ++ ++   + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLEKMQHEHASEM-ELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQYNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 1396 LDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLYEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|317048536|ref|YP_004116184.1| arginyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950153|gb|ADU69628.1| arginyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 576

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/570 (39%), Positives = 335/570 (58%), Gaps = 46/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+ +          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAEQVIQ--------HLDLQGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL R +  +Q    +      V+ V   T      +++D+S+PN+AKEMHVGH+RS
Sbjct: 82   FINIFLDRQWLADQAAQALTLPRLGVSSVAAQT------IVIDYSAPNVAKEMHVGHVRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  ++  +   +ADL+AFY+
Sbjct: 136  TIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAYLEKQQSEH-HEDIALADLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
            E+K+ +DEDE F +RA   VV LQ  D   +  W+ + D++    QK+YDRLNVTLT + 
Sbjct: 195  EAKRTYDEDEAFAERARGYVVKLQGGDEYCRTMWKKLVDITMSQNQKVYDRLNVTLTRKD 254

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L++KGL  + +G  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPGIVADLKEKGLAVISEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H +      +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLQQAWTIVRKAGYV-PESVPLEHHAFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D + FKTRSG T+KL++LLDE + R+L  + +KN   E++  EL    + V  G +KY
Sbjct: 374  GKDGRPFKTRSGGTIKLADLLDEAVERALALVSEKN--PEMSSDELQALAEVVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI ++ L+       + 
Sbjct: 432  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIAADSLQ-----GEIV 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L  E+E  LA  LL+  DV+  V RD   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 487  LSEEREAQLATRLLQFEDVITQVARDGTPHVMCAYLYDLAGLFSGFYEHCPILTAEEE-- 544

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA  TAK +K+  D L I+T
Sbjct: 545  --QVRNSRLQLAALTAKTLKQGLDTLGIKT 572



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/401 (36%), Positives = 220/401 (54%), Gaps = 39/401 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+ +          +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----QAPRQLAEQVIQ--------HLDLQGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL R +  +Q    +      V+ V   T      +++D+S+PN+AKEMHVGH+RS
Sbjct: 82  FINIFLDRQWLADQAAQALTLPRLGVSSVAAQT------IVIDYSAPNVAKEMHVGHVRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  ++  +   +ADL+AFY+
Sbjct: 136 TIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAYLEKQQSEH-HEDIALADLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
           E+K+ +DEDE F +RA   VV LQ  D   +  W+ + D++    QK+YDRLNVTLT + 
Sbjct: 195 EAKRTYDEDEAFAERARGYVVKLQGGDEYCRTMWKKLVDITMSQNQKVYDRLNVTLTRKD 254

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L++KGL  + +G  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255 VMGESLYNDMLPGIVADLKEKGLAVISEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM- 467
           T+D+A  + R E   AD ++Y  D R  HQ LQ      +K G    S          M 
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQ-HQHLQQAWTIVRKAGYVPESVPLEHHAFGMML 373

Query: 468 ---NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 505
                P + R      L+D+   AV+ A   + +K   ++S
Sbjct: 374 GKDGRPFKTRSGGTIKLADLLDEAVERALALVSEKNPEMSS 414



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 198/333 (59%), Gaps = 35/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+ +          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAEQVIQ--------HLDLQGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL R +  +Q    +      V+ V   T      +++D+S+PN+AKEMHVGH+RS
Sbjct: 82   FINIFLDRQWLADQAAQALTLPRLGVSSVAAQT------IVIDYSAPNVAKEMHVGHVRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  ++  +   +ADL+AFY+
Sbjct: 136  TIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAYLEKQQSEH-HEDIALADLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
            E+K+ +DEDE F +RA   VV LQ  D   +  W+ + D++    QK+YDRLNVTLT + 
Sbjct: 195  EAKRTYDEDEAFAERARGYVVKLQGGDEYCRTMWKKLVDITMSQNQKVYDRLNVTLTRKD 254

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L++KGL  + +G  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPGIVADLKEKGLAVISEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R  HQ LQ
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQ-HQHLQ 346


>gi|167855456|ref|ZP_02478221.1| hypothetical protein HPS_03952 [Haemophilus parasuis 29755]
 gi|167853450|gb|EDS24699.1| hypothetical protein HPS_03952 [Haemophilus parasuis 29755]
          Length = 575

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/564 (40%), Positives = 336/564 (59%), Gaps = 35/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +          N  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----LNPREFAQKVVD--------NVDLNGIAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL+  +  +Q ++          LN+   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82   FINIFLAPTWLAQQTENAFSGDKLGINLNQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R+LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K+ +
Sbjct: 142  VVRVLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRTAKEHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            D DE+F ++A   VV LQ  D   +  W+ + +++ +  Q  Y+RLNVTLTE    GES 
Sbjct: 201  DSDEVFAEKARNYVVKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 261  YNPMLPEIVADLKAQGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KAD  +  +D  Q  H +      +KAG + P+   ++   FG++LG+D K 
Sbjct: 321  AKYRFETLKADRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFSLEHHNFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TVKL++LLDE + R+   + +KN   +LT  E     +AVA G +KY+DLS N
Sbjct: 380  FKTRTGGTVKLADLLDEAVERAEKLIAEKN--PDLTACEKQAVVEAVAIGAVKYSDLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ SI   AGI+   L     +  + L  EKE
Sbjct: 438  RTTDYVFDWDNMLSFEGNTAPYMQYAYTRVRSIFSRAGIDPNSL-----TANIVLIDEKE 492

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+  + + +V +D   H LC+YLY+++  FS FY+ C  +  +AE  IK    
Sbjct: 493  RNLAIKLLQFEEAVTVVAKDGTPHVLCQYLYELAGIFSSFYEACPIL--NAEESIK---Q 547

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  D+L I+T
Sbjct: 548  SRLKLAHLTAKTLKQGLDLLGIKT 571



 Score =  243 bits (619), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 143/400 (35%), Positives = 221/400 (55%), Gaps = 25/400 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +          N  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----LNPREFAQKVVD--------NVDLNGIAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL+  +  +Q ++          LN+   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82  FINIFLAPTWLAQQTENAFSGDKLGINLNQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R+LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K+ +
Sbjct: 142 VVRVLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRTAKEHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           D DE+F ++A   VV LQ  D   +  W+ + +++ +  Q  Y+RLNVTLTE    GES 
Sbjct: 201 DSDEVFAEKARNYVVKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 261 YNPMLPEIVADLKAQGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R E  KAD  +  +D R    + QA     K   +  S S +       +     P 
Sbjct: 321 AKYRFETLKADRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHHNFGMMLGKDGKPF 380

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 511
           + R      L+D+   AV+ A   + +K   + +  ++ V
Sbjct: 381 KTRTGGTVKLADLLDEAVERAEKLIAEKNPDLTACEKQAV 420



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 195/327 (59%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +          N  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----LNPREFAQKVVD--------NVDLNGIAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL+  +  +Q ++          LN+   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82   FINIFLAPTWLAQQTENAFSGDKLGINLNQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R+LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K+ +
Sbjct: 142  VVRVLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRTAKEHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            D DE+F ++A   VV LQ  D   +  W+ + +++ +  Q  Y+RLNVTLTE    GES 
Sbjct: 201  DSDEVFAEKARNYVVKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 261  YNPMLPEIVADLKAQGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KAD  +  +D R    + Q
Sbjct: 321  AKYRFETLKADRALVFSDTRQSQHMQQ 347


>gi|16273477|ref|NP_439728.1| arginyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580361|ref|ZP_05848190.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174541|sp|P43832.1|SYR_HAEIN RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|1574424|gb|AAC23231.1| arginyl-tRNA synthetase (argS) [Haemophilus influenzae Rd KW20]
 gi|260093038|gb|EEW76972.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 577

 Score =  402 bits (1032), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 238/605 (39%), Positives = 352/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  250 bits (639), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/441 (35%), Positives = 243/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQHNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  246 bits (627), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 214/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQHNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|170728748|ref|YP_001762774.1| arginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688680|sp|B1KK48.1|SYR_SHEWM RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|169814095|gb|ACA88679.1| arginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 581

 Score =  402 bits (1032), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/563 (41%), Positives = 337/563 (59%), Gaps = 35/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L KI      +KNP +IAQ I       + + P  A+V  K+E+A PGF+
Sbjct: 41   GDFATNLAMMLTKI-----ARKNPREIAQLI-------IDSLPEDAQV-SKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F+       Q+   + +      L +   V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDSALANQLMTALNDDRLGIALPQAQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 693
            R LE++GH V+R NHVGDWGTQFGML+A++++       ++   ++DL+ FY+ +K RFD
Sbjct: 148  RALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAQSGEQAQMELSDLETFYRAAKVRFD 207

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E E F  RA + VVALQ  D    K W    D+S     ++Y+RL V+LT    RGES Y
Sbjct: 208  ESEEFATRARKLVVALQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAY 267

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 805
               + Q+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268  NDDLAQVVRDLDSQGLLSESNGAKVVFQDEFKNKEGEPLPVIIQKADGGYLYATSDMAAM 327

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R    KAD  +Y  DL Q +HF+ + + A+KA  ++ N + ++ +GFG + G+D + F
Sbjct: 328  RYRANVLKADRALYFVDLRQALHFQQVFKLARKANFVDDNIS-LEHMGFGTMNGDDGRPF 386

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSG  VKL +LL E   R+L+ ++ KN   ++   EL++  + V    +KYADLS NR
Sbjct: 387  KTRSGGVVKLVDLLSEADTRALELVRSKN--PDMDEAELAKIAKVVGISSVKYADLSKNR 444

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY+FSF++ML   GNTA YLLYAYTR+A I + A        V      + LEHEKE 
Sbjct: 445  ASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA------TDVDLSDAKIQLEHEKEK 498

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             L   L + N+VL  +      H LC YL++++ AFS FY+ C  +  D E + K+    
Sbjct: 499  ELGTKLAQFNEVLTRMVSKGQPHALCGYLFELAGAFSSFYEACPVLAADTEEQKKS---- 554

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RLLLA+ TAK +K+   +L I T
Sbjct: 555  RLLLAKLTAKTLKQGLGLLGIET 577



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/329 (41%), Positives = 196/329 (59%), Gaps = 25/329 (7%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L KI      +KNP +IAQ I       + + P  A+V  K+E+A PGF+
Sbjct: 41  GDFATNLAMMLTKI-----ARKNPREIAQLI-------IDSLPEDAQV-SKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F+       Q+   + +      L +   V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88  NFFIDDSALANQLMTALNDDRLGIALPQAQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 303
           R LE++GH V+R NHVGDWGTQFGML+A++++       ++   ++DL+ FY+ +K RFD
Sbjct: 148 RALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAQSGEQAQMELSDLETFYRAAKVRFD 207

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E E F  RA + VVALQ  D    K W    D+S     ++Y+RL V+LT    RGES Y
Sbjct: 208 ESEEFATRARKLVVALQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAY 267

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 415
              + Q+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268 NDDLAQVVRDLDSQGLLSESNGAKVVFQDEFKNKEGEPLPVIIQKADGGYLYATSDMAAM 327

Query: 416 RQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           R R    KAD  +Y  D R    + QV +
Sbjct: 328 RYRANVLKADRALYFVDLRQALHFQQVFK 356



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/329 (41%), Positives = 196/329 (59%), Gaps = 25/329 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L KI      +KNP +IAQ I       + + P  A+V  K+E+A PGF+
Sbjct: 41   GDFATNLAMMLTKI-----ARKNPREIAQLI-------IDSLPEDAQV-SKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F+       Q+   + +      L +   V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDSALANQLMTALNDDRLGIALPQAQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 1320
            R LE++GH V+R NHVGDWGTQFGML+A++++       ++   ++DL+ FY+ +K RFD
Sbjct: 148  RALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAQSGEQAQMELSDLETFYRAAKVRFD 207

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E E F  RA + VVALQ  D    K W    D+S     ++Y+RL V+LT    RGES Y
Sbjct: 208  ESEEFATRARKLVVALQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAY 267

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 1432
               + Q+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268  NDDLAQVVRDLDSQGLLSESNGAKVVFQDEFKNKEGEPLPVIIQKADGGYLYATSDMAAM 327

Query: 1433 RQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            R R    KAD  +Y  D R    + QV +
Sbjct: 328  RYRANVLKADRALYFVDLRQALHFQQVFK 356


>gi|260582207|ref|ZP_05850001.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094839|gb|EEW78733.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 577

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 239/605 (39%), Positives = 352/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKQAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A     ++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAAL----LTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/441 (35%), Positives = 244/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKQAV 420



 Score =  250 bits (638), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 145/368 (39%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDE+F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEVFAEKARNYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KAD  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|253989980|ref|YP_003041336.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica]
 gi|211639039|emb|CAR67652.1| arginyl-trna synthetase (ec 6.1.1.19) (arginine--trna ligase) (argrs)
            [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781430|emb|CAQ84593.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 576

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 239/608 (39%), Positives = 344/608 (56%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  +HA+  A    G  T S A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSEKVSHALIAA----GAPTDSEAHIRQSAKSQFGDYQANGVMAAAKKVG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ + S++         L  +  K+E+A PGF+N+FL + +    ++  + + 
Sbjct: 53   -MPPRQLAEKVVSLL--------DLQGIASKVEIAGPGFINIFLDKAWIAANVETALKDE 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    K   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH V+R NHVG
Sbjct: 104  KLGITPV---KPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNENASDMALSDLEAFYREAKKNYDEDEEFAVRARSYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W  + D++    Q+ YDRLNVTLT     GES Y   +  LV  L++KGL  
Sbjct: 220  GDEYCRTMWRKLIDITMVQNQQTYDRLNVTLTRDSVMGESLYNDLLPGLVADLKQKGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I+Y 
Sbjct: 280  ESDGATVVYLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLHADRILYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTR+G TV+L++LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHMFGMMLGKDGKPFKTRAGGTVRLTDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   +++KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAIERANTLIREKN--PDMPKDELKKVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLAFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ SI + AGI+   L     + PV L  E+E ALA  LL+  + +  
Sbjct: 454  GNTAPYMQYAYTRVTSIFKRAGIDENSL-----TLPVILNEEREQALATRLLQFEETITT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +K+ 
Sbjct: 509  VAREGTPHVMCAYLYDLAGLFSGFYEHCQILNAESEA----LRQSRLKLALLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             + L I T
Sbjct: 565  LNTLGIET 572



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/372 (39%), Positives = 208/372 (55%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  +HA+  A    G  T S A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQAILSEKVSHALIAA----GAPTDSEAHIRQSAKSQFGDYQANGVMAAAKKVG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ + S++         L  +  K+E+A PGF+N+FL + +    ++  + + 
Sbjct: 53  -MPPRQLAEKVVSLL--------DLQGIASKVEIAGPGFINIFLDKAWIAANVETALKDE 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    K   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH V+R NHVG
Sbjct: 104 KLGITPV---KPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KVQNENASDMALSDLEAFYREAKKNYDEDEEFAVRARSYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W  + D++    Q+ YDRLNVTLT     GES Y   +  LV  L++KGL  
Sbjct: 220 GDEYCRTMWRKLIDITMVQNQQTYDRLNVTLTRDSVMGESLYNDLLPGLVADLKQKGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I+Y 
Sbjct: 280 ESDGATVVYLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLHADRILYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  244 bits (622), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/371 (39%), Positives = 207/371 (55%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  +HA+  A    G  T S A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSEKVSHALIAA----GAPTDSEAHIRQSAKSQFGDYQANGVMAAAKKVG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ + S++         L  +  K+E+A PGF+N+FL + +    ++  + + 
Sbjct: 53   -MPPRQLAEKVVSLL--------DLQGIASKVEIAGPGFINIFLDKAWIAANVETALKDE 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    K   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH V+R NHVG
Sbjct: 104  KLGITPV---KPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNENASDMALSDLEAFYREAKKNYDEDEEFAVRARSYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W  + D++    Q+ YDRLNVTLT     GES Y   +  LV  L++KGL  
Sbjct: 220  GDEYCRTMWRKLIDITMVQNQQTYDRLNVTLTRDSVMGESLYNDLLPGLVADLKQKGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I+Y 
Sbjct: 280  ESDGATVVYLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLHADRILYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|123442647|ref|YP_001006624.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp.
            enterocolitica 8081]
 gi|166200587|sp|A1JRM9.1|SYR_YERE8 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|122089608|emb|CAL12457.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp.
            enterocolitica 8081]
          Length = 576

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 348/608 (57%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAIAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIASKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAIERAGKLIAEKN--PDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ S+ + AGI+  +L     + P+ +  ++E ALA  LL+  +++  
Sbjct: 454  GNTAPYMQYAYTRVVSVFKRAGIDESNL-----TLPLVITEDREAALATRLLQFEEIITT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  D+E   ++    RL LA  TAK +K+ 
Sbjct: 509  VAREGTPHVMCSYLYDLAGLFSSFYEHCQILNADSEESRQS----RLKLAMLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             D L I+T
Sbjct: 565  LDTLGIQT 572



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/372 (37%), Positives = 209/372 (56%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAIAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53  -MQPRQLAEKVIELL--------DLDGIASKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104 KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220 GDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280 ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/371 (37%), Positives = 208/371 (56%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAIAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIASKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|149911776|ref|ZP_01900381.1| arginyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805164|gb|EDM65185.1| arginyl-tRNA synthetase [Moritella sp. PE36]
          Length = 584

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 236/566 (41%), Positives = 331/566 (58%), Gaps = 38/566 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM + K       KKNP ++AQ I          N   + ++D+ E+A PGF+
Sbjct: 41   GDLATNLAMMMAK-----PAKKNPRELAQLIID--------NLPESDLVDRTEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 630
            N+FL++ +  +QI DI +      VQ  T      V+VD SSPN+AKEMHVGHLRS+IIG
Sbjct: 88   NIFLNQNWLAQQI-DIALEDDNLAVQKTTAPDT--VVVDLSSPNLAKEMHVGHLRSSIIG 144

Query: 631  DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 690
            D+++R LE LGH+V+R NHVGDWGTQFGML+A++++K  +    S  ++DL+ FY+ +K 
Sbjct: 145  DSVARTLELLGHNVIRQNHVGDWGTQFGMLLAYMEEKRAENAEISMQLSDLEVFYRAAKG 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE E F  RA + VV LQ  D +  K W+   DVS      IY RLNV LT    RGE
Sbjct: 205  RFDESEDFAIRAREMVVMLQSGDEECNKLWKEFNDVSLAHCHDIYKRLNVKLTRDDVRGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 802
            SFY   +  +V  LE +GLL   +G K ++      +D   +P+ I K+ GGF Y T+DL
Sbjct: 265  SFYNSDLHNVVSELEAQGLLTESNGAKCVFLDEFKNKDGDPLPVIIQKNGGGFLYATTDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R +   A+ I+Y  D  Q +HF+ +    +KAG + P +T ++ +GFG + G D 
Sbjct: 325  AAMRYRQQTLNANRIMYFVDQRQALHFQQVFSVVQKAGFVKP-ETSLEHLGFGTMNGADG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTRSG TVKL +LL E   R+   +K KN +  L   EL    + V    +KYADLS
Sbjct: 384  RPFKTRSGGTVKLVDLLTEAEERAYALVKSKNPN--LAEDELKHIARVVGISSVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR+ DY+F+FD ML   GNTA YLLYA TR+ SI       +E     A+   V L  +
Sbjct: 442  KNRSSDYIFNFDSMLSFEGNTAPYLLYACTRVGSIFNKVDAATEAKLATAK---VQLNED 498

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            KE  LA  L++ N+++ LV +    + LC YL++++  FS FY+ C  +  + E     +
Sbjct: 499  KEQELAGKLIQFNEIVHLVAKRATPNTLCTYLFELAGVFSSFYEACPILSTEDEA----I 554

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RL LA+ TAK +K+  D+L I T
Sbjct: 555  KLSRLKLAQLTAKTLKQGLDLLGIET 580



 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 158/408 (38%), Positives = 224/408 (54%), Gaps = 39/408 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM + K       KKNP ++AQ I          N   + ++D+ E+A PGF+
Sbjct: 41  GDLATNLAMMMAK-----PAKKNPRELAQLIID--------NLPESDLVDRTEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           N+FL++ +  +QI DI +      VQ  T      V+VD SSPN+AKEMHVGHLRS+IIG
Sbjct: 88  NIFLNQNWLAQQI-DIALEDDNLAVQKTTAPDT--VVVDLSSPNLAKEMHVGHLRSSIIG 144

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 300
           D+++R LE LGH+V+R NHVGDWGTQFGML+A++++K  +    S  ++DL+ FY+ +K 
Sbjct: 145 DSVARTLELLGHNVIRQNHVGDWGTQFGMLLAYMEEKRAENAEISMQLSDLEVFYRAAKG 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE E F  RA + VV LQ  D +  K W+   DVS      IY RLNV LT    RGE
Sbjct: 205 RFDESEDFAIRAREMVVMLQSGDEECNKLWKEFNDVSLAHCHDIYKRLNVKLTRDDVRGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 412
           SFY   +  +V  LE +GLL   +G K ++      +D   +P+ I K+ GGF Y T+DL
Sbjct: 265 SFYNSDLHNVVSELEAQGLLTESNGAKCVFLDEFKNKDGDPLPVIIQKNGGGFLYATTDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHRS---YHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMN- 468
           AA+R R +   A+ I+Y  D R    + QV   +    +K G     +S        MN 
Sbjct: 325 AAMRYRQQTLNANRIMYFVDQRQALHFQQVFSVV----QKAGFVKPETSLEHLGFGTMNG 380

Query: 469 ---VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 513
               P + R      L D+ T A + A+  +  K  ++A    K++ +
Sbjct: 381 ADGRPFKTRSGGTVKLVDLLTEAEERAYALVKSKNPNLAEDELKHIAR 428



 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/322 (43%), Positives = 193/322 (59%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM + K       KKNP ++AQ I          N   + ++D+ E+A PGF+
Sbjct: 41   GDLATNLAMMMAK-----PAKKNPRELAQLIID--------NLPESDLVDRTEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            N+FL++ +  +QI DI +      VQ  T      V+VD SSPN+AKEMHVGHLRS+IIG
Sbjct: 88   NIFLNQNWLAQQI-DIALEDDNLAVQKTTAPDT--VVVDLSSPNLAKEMHVGHLRSSIIG 144

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+++R LE LGH+V+R NHVGDWGTQFGML+A++++K  +    S  ++DL+ FY+ +K 
Sbjct: 145  DSVARTLELLGHNVIRQNHVGDWGTQFGMLLAYMEEKRAENAEISMQLSDLEVFYRAAKG 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE E F  RA + VV LQ  D +  K W+   DVS      IY RLNV LT    RGE
Sbjct: 205  RFDESEDFAIRAREMVVMLQSGDEECNKLWKEFNDVSLAHCHDIYKRLNVKLTRDDVRGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 1429
            SFY   +  +V  LE +GLL   +G K ++      +D   +P+ I K+ GGF Y T+DL
Sbjct: 265  SFYNSDLHNVVSELEAQGLLTESNGAKCVFLDEFKNKDGDPLPVIIQKNGGGFLYATTDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R +   A+ I+Y  D R
Sbjct: 325  AAMRYRQQTLNANRIMYFVDQR 346


>gi|227111621|ref|ZP_03825277.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
            brasiliensis PBR1692]
          Length = 576

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/611 (38%), Positives = 348/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWIASQVENALNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDASARTLAFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESASEMDLSDLEAFYREAKKHYDEDADFAERARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  + +KN   E    EL+   + V+ G IKYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAYDRALKLIAEKNPQME--SDELTALAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + AGI  + L     + P++L  E+EFALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVASIFKRAGIQEDSL-----TQPITLSDEREFALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  +++     V   RL LA  TAK +
Sbjct: 506  ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAESD----DVRQSRLRLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K   D L I T
Sbjct: 562  KLGLDTLGIET 572



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/375 (36%), Positives = 211/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53  -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWIASQVENALNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDASARTLAFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESASEMDLSDLEAFYREAKKHYDEDADFAERARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/374 (36%), Positives = 210/374 (56%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++        +L  + +K E+A PGF+N+FL + +   Q+++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWIASQVENALNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104  KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDASARTLAFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESASEMDLSDLEAFYREAKKHYDEDADFAERARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT++   GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|145639894|ref|ZP_01795494.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145270985|gb|EDK10902.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII]
          Length = 581

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 239/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+    ++ ++   + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLEKMQHEHASEM-ELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQYNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 769  LDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLYEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKESVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E     V   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDEA----VKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/441 (35%), Positives = 245/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+    ++ ++   + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLEKMQHEHASEM-ELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRTMWKRLVDITMQQNQYNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 379 LDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLYEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R      L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKESV 420



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 216/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+    ++ ++   + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLEKMQHEHASEM-ELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRTMWKRLVDITMQQNQYNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLAV 279

Query: 1396 LDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++    +++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLYEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|114564914|ref|YP_752428.1| arginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122298448|sp|Q07WM5.1|SYR_SHEFN RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|114336207|gb|ABI73589.1| arginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 581

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 239/566 (42%), Positives = 333/566 (58%), Gaps = 41/566 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K+      KKNP ++AQ I       + T P+ +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AKKNPRELAQLI-------IDTLPA-SSYVAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F+       Q++  + +   GV  PT   K  ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDNALANQLQQALTSDHLGVALPT---KQTIVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LEYLGH+V+R NHVGDWGTQFGML+A +++ +  +       ++DL++FY+ +K 
Sbjct: 145  SVVRALEYLGHNVIRQNHVGDWGTQFGMLLALMEELRAANGEQAKMELSDLESFYRAAKV 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VVALQ  D    K W    D+S      +Y RL V+LT     GE
Sbjct: 205  RFDESTEFATRARQLVVALQSGDEYCNKLWREFNDISLSHCHDVYKRLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   + Q+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLAQVVKDLDAQGLLSESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD  +Y  DL Q +HF+ +   AK A  + P  + ++  GFG + GED 
Sbjct: 325  AAMRYRSNVLKADRAMYFVDLRQALHFQQVFSLAKLAKFVRPEMS-LEHTGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTRSG  VKL +LLDE   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRSGGVVKLVDLLDEADVRALELVRSKN--PDMDEATLTEIARVVGISSVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I + A     DL  A     + LEHE
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDIDLSQA----KIVLEHE 495

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            KE  L   L +  +VL  +T     H LC YLY++++ FS FY+ C  +  + E + ++ 
Sbjct: 496  KEKDLGTKLAQFGEVLTRMTDKGLPHVLCGYLYELASEFSSFYEACPVLAAETEAQKQS- 554

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RLLLA+ TAK +K    +L I T
Sbjct: 555  ---RLLLAQLTAKTLKTGLSLLGIET 577



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 191/322 (59%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K+      KKNP ++AQ I       + T P+ +  + K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTKV-----AKKNPRELAQLI-------IDTLPA-SSYVAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F+       Q++  + +   GV  PT   K  ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFIDDNALANQLQQALTSDHLGVALPT---KQTIVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LEYLGH+V+R NHVGDWGTQFGML+A +++ +  +       ++DL++FY+ +K 
Sbjct: 145 SVVRALEYLGHNVIRQNHVGDWGTQFGMLLALMEELRAANGEQAKMELSDLESFYRAAKV 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VVALQ  D    K W    D+S      +Y RL V+LT     GE
Sbjct: 205 RFDESTEFATRARQLVVALQSGDEYCNKLWREFNDISLSHCHDVYKRLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   + Q+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265 SAYNADLAQVVKDLDAQGLLSESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD  +Y  D R
Sbjct: 325 AAMRYRSNVLKADRAMYFVDLR 346



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 191/322 (59%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K+      KKNP ++AQ I       + T P+ +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AKKNPRELAQLI-------IDTLPA-SSYVAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F+       Q++  + +   GV  PT   K  ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDNALANQLQQALTSDHLGVALPT---KQTIVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LEYLGH+V+R NHVGDWGTQFGML+A +++ +  +       ++DL++FY+ +K 
Sbjct: 145  SVVRALEYLGHNVIRQNHVGDWGTQFGMLLALMEELRAANGEQAKMELSDLESFYRAAKV 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VVALQ  D    K W    D+S      +Y RL V+LT     GE
Sbjct: 205  RFDESTEFATRARQLVVALQSGDEYCNKLWREFNDISLSHCHDVYKRLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   + Q+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLAQVVKDLDAQGLLSESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD  +Y  D R
Sbjct: 325  AAMRYRSNVLKADRAMYFVDLR 346


>gi|145627706|ref|ZP_01783507.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979481|gb|EDJ89140.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 577

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 239/605 (39%), Positives = 351/605 (58%), Gaps = 43/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYARLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR G TVKL++LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRIGGTVKLADLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN  T L+  E     +AV  G +KYADLS NR  DYVF +D ML   GNT
Sbjct: 399  ERATVLINEKN--TNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI     INS  L  A    P++++ +KE  LA  LL+  + +  V +
Sbjct: 457  APYMQYAYTRIRSIFNKTDINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H LC YLY+++  FS FY++C  +  + E    ++   RL LA  T K +K+   +
Sbjct: 513  EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDE----SIKLSRLKLALLTEKTLKQGLTL 568

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 569  LGIKT 573



 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/441 (35%), Positives = 244/441 (55%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53  -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQHNYARLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280 ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R    + QA     K   +  S S + K     +     P + R+     L+D+   A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRIGGTVKLADLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   + +K  ++++  ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKEAV 420



 Score =  246 bits (628), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 214/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A    G   +  A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQSILSDKIKQAMILA----GADQSCDALIRQSGKPQFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP + AQ +          N  L+ + +K+E+A PGF+N+FL+  +   +I   + + 
Sbjct: 53   -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+Q      K  V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104  NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       + DL+AFY+E+KK +DEDEIF ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ +  Q  Y RLNVTLTE+   GES Y   +  +V  L+K+GL  
Sbjct: 220  GDEYCRAMWKRLVDITMQQNQHNYARLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             +DG  +++ +   ++   PM ++  K DGGF Y T+D+AA + R E  KA+  +  +D 
Sbjct: 280  ENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|307130871|ref|YP_003882887.1| arginyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528400|gb|ADM98330.1| arginyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 576

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 240/611 (39%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+   H   +A     D  A V  + +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQALLSEK-VHQAMIAAGAPADSEAMVRQSAKA---QFGDYQANGIMAAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +   +         L  +  K E+A PGF+N+FL+  +   Q++  +   
Sbjct: 53   -MAPRQLAEKVLQTL--------QLDGIAAKTEIAGPGFINIFLAPQWLSGQLEHALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V+ V+P T      ++VD+S+PN+AKEMHVG+LRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  KLGVSAVEPQT------IVVDYSAPNVAKEMHVGNLRSTIIGDASVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIAHL+D   +  T    +ADL+AFY+E+KK +D+D +F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAHLED-VQNGNTSDLELADLEAFYREAKKHYDDDAVFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W  + D++    Q+ YDRLNV+LT     GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRSMWRKLVDITMVQNQRSYDRLNVSLTPNDVMGESLYNAMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A  +
Sbjct: 277  LAVESEGAIVVYLDEYKNKEGEAMGVI---IQKKDGGYLYTTTDIACAKYRYEKLGASRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTR+G T+KLSE
Sbjct: 334  LYYIDSRQHQHLMQAWSIVRKAGYV-PESVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  +  KN   E+   EL +  Q V+ G +KYADLS NR  DY+F +D ML
Sbjct: 393  LLDEAYERALTLIAGKN--PEMERGELEQLAQVVSVGAVKYADLSKNRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR++SI + AG+    L     + P++L  E E ALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVSSIFKRAGVEEASL-----TQPITLTAEHEQALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V RD   H +C YLYD++  FS FY+NC  +  D +G  ++    RL LA  TAK +
Sbjct: 506  VTTVARDGTPHVMCAYLYDLAGLFSGFYENCPILNADNDGTRQS----RLKLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K   + L I+T
Sbjct: 562  KTGLNTLGIQT 572



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/375 (37%), Positives = 208/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+   H   +A     D  A V  + +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQALLSEK-VHQAMIAAGAPADSEAMVRQSAKA---QFGDYQANGIMAAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +   +         L  +  K E+A PGF+N+FL+  +   Q++  +   
Sbjct: 53  -MAPRQLAEKVLQTL--------QLDGIAAKTEIAGPGFINIFLAPQWLSGQLEHALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V+ V+P T      ++VD+S+PN+AKEMHVG+LRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 KLGVSAVEPQT------IVVDYSAPNVAKEMHVGNLRSTIIGDASVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIAHL+D   +  T    +ADL+AFY+E+KK +D+D +F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAHLED-VQNGNTSDLELADLEAFYREAKKHYDDDAVFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W  + D++    Q+ YDRLNV+LT     GES Y   + ++V  L+ KG
Sbjct: 217 LQSGDEYCRSMWRKLVDITMVQNQRSYDRLNVSLTPNDVMGESLYNAMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A  +
Sbjct: 277 LAVESEGAIVVYLDEYKNKEGEAMGVI---IQKKDGGYLYTTTDIACAKYRYEKLGASRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  233 bits (594), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 207/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+   H   +A     D  A V  + +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQALLSEK-VHQAMIAAGAPADSEAMVRQSAKA---QFGDYQANGIMAAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +   +         L  +  K E+A PGF+N+FL+  +   Q++  +   
Sbjct: 53   -MAPRQLAEKVLQTL--------QLDGIAAKTEIAGPGFINIFLAPQWLSGQLEHALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V+ V+P T      ++VD+S+PN+AKEMHVG+LRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  KLGVSAVEPQT------IVVDYSAPNVAKEMHVGNLRSTIIGDASVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIAHL+D   +  T    +ADL+AFY+E+KK +D+D +F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAHLED-VQNGNTSDLELADLEAFYREAKKHYDDDAVFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W  + D++    Q+ YDRLNV+LT     GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRSMWRKLVDITMVQNQRSYDRLNVSLTPNDVMGESLYNAMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A  +
Sbjct: 277  LAVESEGAIVVYLDEYKNKEGEAMGVI---IQKKDGGYLYTTTDIACAKYRYEKLGASRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|33860747|ref|NP_892308.1| arginyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
            CCMP1986]
 gi|39932084|sp|Q7V396.1|SYR_PROMP RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|33633689|emb|CAE18646.1| Arginyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
            CCMP1986]
          Length = 603

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/583 (40%), Positives = 342/583 (58%), Gaps = 42/583 (7%)

Query: 507  NEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKI 566
            N+    +FGD+QCN  + L KI+K      NP +IA  IA + T  L  N  ++ + + +
Sbjct: 38   NQASKEEFGDYQCNICLVLSKIYKS-----NPREIA--IAFIET--LKENKKISNLCENL 88

Query: 567  EVAKPGFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
            E+A PGF+N+ L      E IK  I      V       +  K +V+VDFSSPNIAKEMH
Sbjct: 89   EIAGPGFINIKLKNKVLIEAIKSNIKCPRAGVPLSHKNNIYSKKKVIVDFSSPNIAKEMH 148

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPI 678
            VGHLRSTIIGD+IS++ E+ G+ V+RLNH+GDWGTQFGMLI  L+D +   L +     I
Sbjct: 149  VGHLRSTIIGDSISKIFEFRGYIVLRLNHIGDWGTQFGMLITQLKDLYSSDLKEIDRIKI 208

Query: 679  ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 738
            +DL  FYK SKKRFD +  F+KR+ + VV LQ  D    +AW+++C+ SR++F +IY  L
Sbjct: 209  SDLVEFYKASKKRFDNETEFQKRSREEVVQLQSGDKKSIEAWKLLCNQSRKEFDQIYKTL 268

Query: 739  NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDG 793
            N+ + ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DG
Sbjct: 269  NIKIKERGESFYNPFLKSIIEDLNYKKILIEDQGAKCVFLDGMTNKEGNPLPLIIQKKDG 328

Query: 794  GFTYDTSDLAAIRQRIEEE----KADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRM 849
            GF Y T+DLAA+R R  +E     A  I+YVTD GQ  HF  + + AK+A  + P    +
Sbjct: 329  GFNYATTDLAALRYRFTKEPYGDNAARIIYVTDHGQSNHFAGVFQVAKRANWI-PKDCEV 387

Query: 850  DFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELS 905
            + V FG+V G D KK KTR GDT+KL +LL E ++R+    L +L++++R        + 
Sbjct: 388  NHVPFGLVQGIDGKKLKTREGDTIKLKDLLSESVKRAKEDLLKRLENESRFE--NDDFVL 445

Query: 906  EAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINS 965
               + +  G +KYADLS NR  +Y FSF+KML   GNTA YLLY   RI+ I R   +  
Sbjct: 446  NTSKVIGIGAVKYADLSQNRITNYQFSFEKMLSLNGNTAPYLLYTLVRISGINRKNNMTE 505

Query: 966  EDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFY 1025
            E + + +    +S  H+ E+ L + LL+ ++V++ + +DL  + LC YL+++   F+ FY
Sbjct: 506  EAINLES----ISYSHDLEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCKTFNRFY 561

Query: 1026 DNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            D    ++ + + KI      RL L   T K +K   ++L I T
Sbjct: 562  DQVPILKGEIDTKI-----SRLTLCALTEKTLKLSLELLGIET 599



 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/334 (44%), Positives = 204/334 (61%), Gaps = 26/334 (7%)

Query: 117 NEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKI 176
           N+    +FGD+QCN  + L KI+K      NP +IA  IA + T  L  N  ++ + + +
Sbjct: 38  NQASKEEFGDYQCNICLVLSKIYKS-----NPREIA--IAFIET--LKENKKISNLCENL 88

Query: 177 EVAKPGFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMH 230
           E+A PGF+N+ L      E IK  I      V       +  K +V+VDFSSPNIAKEMH
Sbjct: 89  EIAGPGFINIKLKNKVLIEAIKSNIKCPRAGVPLSHKNNIYSKKKVIVDFSSPNIAKEMH 148

Query: 231 VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPI 288
           VGHLRSTIIGD+IS++ E+ G+ V+RLNH+GDWGTQFGMLI  L+D +   L +     I
Sbjct: 149 VGHLRSTIIGDSISKIFEFRGYIVLRLNHIGDWGTQFGMLITQLKDLYSSDLKEIDRIKI 208

Query: 289 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 348
           +DL  FYK SKKRFD +  F+KR+ + VV LQ  D    +AW+++C+ SR++F +IY  L
Sbjct: 209 SDLVEFYKASKKRFDNETEFQKRSREEVVQLQSGDKKSIEAWKLLCNQSRKEFDQIYKTL 268

Query: 349 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDG 403
           N+ + ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DG
Sbjct: 269 NIKIKERGESFYNPFLKSIIEDLNYKKILIEDQGAKCVFLDGMTNKEGNPLPLIIQKKDG 328

Query: 404 GFTYDTSDLAAIRQRIEEE----KADWIVYVTDH 433
           GF Y T+DLAA+R R  +E     A  I+YVTDH
Sbjct: 329 GFNYATTDLAALRYRFTKEPYGDNAARIIYVTDH 362



 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/334 (44%), Positives = 204/334 (61%), Gaps = 26/334 (7%)

Query: 1134 NEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKI 1193
            N+    +FGD+QCN  + L KI+K      NP +IA  IA + T  L  N  ++ + + +
Sbjct: 38   NQASKEEFGDYQCNICLVLSKIYKS-----NPREIA--IAFIET--LKENKKISNLCENL 88

Query: 1194 EVAKPGFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMH 1247
            E+A PGF+N+ L      E IK  I      V       +  K +V+VDFSSPNIAKEMH
Sbjct: 89   EIAGPGFINIKLKNKVLIEAIKSNIKCPRAGVPLSHKNNIYSKKKVIVDFSSPNIAKEMH 148

Query: 1248 VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPI 1305
            VGHLRSTIIGD+IS++ E+ G+ V+RLNH+GDWGTQFGMLI  L+D +   L +     I
Sbjct: 149  VGHLRSTIIGDSISKIFEFRGYIVLRLNHIGDWGTQFGMLITQLKDLYSSDLKEIDRIKI 208

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
            +DL  FYK SKKRFD +  F+KR+ + VV LQ  D    +AW+++C+ SR++F +IY  L
Sbjct: 209  SDLVEFYKASKKRFDNETEFQKRSREEVVQLQSGDKKSIEAWKLLCNQSRKEFDQIYKTL 268

Query: 1366 NVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDG 1420
            N+ + ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DG
Sbjct: 269  NIKIKERGESFYNPFLKSIIEDLNYKKILIEDQGAKCVFLDGMTNKEGNPLPLIIQKKDG 328

Query: 1421 GFTYDTSDLAAIRQRIEEE----KADWIVYVTDH 1450
            GF Y T+DLAA+R R  +E     A  I+YVTDH
Sbjct: 329  GFNYATTDLAALRYRFTKEPYGDNAARIIYVTDH 362


>gi|74311774|ref|YP_310193.1| arginyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|383177881|ref|YP_005455886.1| arginyl-tRNA synthetase [Shigella sonnei 53G]
 gi|414575520|ref|ZP_11432723.1| arginyl-tRNA synthetase [Shigella sonnei 3233-85]
 gi|415850789|ref|ZP_11527649.1| arginyl-tRNA synthetase [Shigella sonnei 53G]
 gi|418264242|ref|ZP_12884799.1| arginyl-tRNA synthetase [Shigella sonnei str. Moseley]
 gi|420358035|ref|ZP_14859036.1| arginyl-tRNA synthetase [Shigella sonnei 3226-85]
 gi|420362891|ref|ZP_14863796.1| arginyl-tRNA synthetase [Shigella sonnei 4822-66]
 gi|109895036|sp|Q3Z2Q4.1|SYR_SHISS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|73855251|gb|AAZ87958.1| arginine tRNA synthetase [Shigella sonnei Ss046]
 gi|323165334|gb|EFZ51122.1| arginyl-tRNA synthetase [Shigella sonnei 53G]
 gi|391286097|gb|EIQ44650.1| arginyl-tRNA synthetase [Shigella sonnei 3226-85]
 gi|391287504|gb|EIQ46029.1| arginyl-tRNA synthetase [Shigella sonnei 3233-85]
 gi|391295464|gb|EIQ53620.1| arginyl-tRNA synthetase [Shigella sonnei 4822-66]
 gi|397902358|gb|EJL18683.1| arginyl-tRNA synthetase [Shigella sonnei str. Moseley]
          Length = 578

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 324/570 (56%), Gaps = 44/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MTPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGDEMELADLEGFYRDAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 199  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 375  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 433  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 488

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 489  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 547  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 574



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 192/336 (57%), Gaps = 33/336 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MTPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGDEMELADLEGFYRDAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 199 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 351



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 190/333 (57%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MTPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGDEMELADLEGFYRDAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 199  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 348


>gi|387774126|ref|ZP_10129400.1| arginine--tRNA ligase [Haemophilus parahaemolyticus HK385]
 gi|386902676|gb|EIJ67511.1| arginine--tRNA ligase [Haemophilus parahaemolyticus HK385]
          Length = 575

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 238/567 (41%), Positives = 341/567 (60%), Gaps = 41/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I +        N +L  V +K+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILA--------NVNLDGVAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL++ +        +  VN G+Q  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNKDWLANNANSALQAVNFGIQ--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENENASQLELSDLEAFYRAAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
              +DED  F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   G
Sbjct: 198  AHYDEDAAFAEKARGYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   + ++V  L+ KGL   DDG  +++ +   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +AA + R E   AD ++  +D  Q  H +      +KAG + P+   ++   FG++LG+D
Sbjct: 318  IAAAKYRYETLSADRVLVFSDSRQAQHMQQAWLITRKAGYV-PDSFSLEHPFFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL +LLDE + R+ DKL  + R  ELT  E +   +AVA G +KY+DL
Sbjct: 377  GKPFKTRSGGTVKLKDLLDEAVERA-DKLISE-RSQELTAEEKAAVVEAVAIGSVKYSDL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTRI SI   +GI+++ L     +  + L  
Sbjct: 435  SKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFARSGIDADQL-----TGDIVLTE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE ALA  LL+  + L  V +D   H LC+YLY+++  FS FY+ C  +  +     ++
Sbjct: 490  DKERALAVKLLQFEEALNGVAKDGMPHILCQYLYELAGTFSSFYEACPILNAE-----ES 544

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K+  D+L I+T
Sbjct: 545  VKNSRLRLAALTAKTLKQGLDLLGIKT 571



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 199/331 (60%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I +        N +L  V +K+E+A PG
Sbjct: 35  EFGDYQANGAMGAAKKLG-----MNPREFAQKILA--------NVNLDGVAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL++ +        +  VN G+Q  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLNKDWLANNANSALQAVNFGIQ--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139 GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENENASQLELSDLEAFYRAAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
             +DED  F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   G
Sbjct: 198 AHYDEDAAFAEKARGYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   + ++V  L+ KGL   DDG  +++ +   ++   PM ++  K DGGF Y T+D
Sbjct: 258 ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +AA + R E   AD ++  +D R    + QA
Sbjct: 318 IAAAKYRYETLSADRVLVFSDSRQAQHMQQA 348



 Score =  237 bits (604), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 198/330 (60%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I +        N +L  V +K+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILA--------NVNLDGVAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL++ +        +  VN G+Q  T N +  +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLNKDWLANNANSALQAVNFGIQ--TANPQ-TIVIDYSSPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENENASQLELSDLEAFYRAAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
              +DED  F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   G
Sbjct: 198  AHYDEDAAFAEKARGYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   + ++V  L+ KGL   DDG  +++ +   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +AA + R E   AD ++  +D R    + Q
Sbjct: 318  IAAAKYRYETLSADRVLVFSDSRQAQHMQQ 347


>gi|242239601|ref|YP_002987782.1| arginyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131658|gb|ACS85960.1| arginyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 576

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 332/570 (58%), Gaps = 46/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +  ++         L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----MPPRQLAEQVVQLL--------QLDGIAAKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL R +   Q++  +      + GV+P T      +++D+S+PN+AKEMHVGHLRS
Sbjct: 82   FINIFLDRQWLSAQLEHALSAPKLGIAGVEPQT------IVIDYSAPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD   R L +LGH V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+
Sbjct: 136  TIIGDAAVRTLAFLGHKVIRANHVGDWGTQFGMLIAYLE-KVQNEHAGDLELSDLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
            E+KK +D+D  F +RA   VV LQ  D   +  W  + D++    Q+ YDRLNVTLT+  
Sbjct: 195  EAKKHYDDDAAFAERARGYVVKLQGGDEYCRTLWRRLVDITMSQNQRNYDRLNVTLTKDD 254

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L+ KGL    +G  +++ E   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPGIVADLKAKGLAVESEGATVVYLEEFRNKEGEPMGVIIQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   A+ ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLNANRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDAVSLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLSELLDE   R+L  + +KN   ++   EL +  Q V+ G +KY
Sbjct: 374  GKDGKPFKTRAGGTIKLSELLDEAYDRALALIAEKN--PQMARAELEQLAQVVSVGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ASI + AG++   L     + P+ 
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFKRAGVDDGSL-----TQPII 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L+ E+E ALA  LL+  + +  V R+   H +C YLYD++  FS FY++C  +  D++  
Sbjct: 487  LDDERELALATRLLQFEETITTVAREGTPHVMCAYLYDLAGLFSSFYEHCPILNADSD-- 544

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              +V   RL LA+ TA  +K   D L I+T
Sbjct: 545  --SVRQSRLKLAQLTAMTLKTGLDTLGIQT 572



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/334 (38%), Positives = 193/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +  ++         L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----MPPRQLAEQVVQLL--------QLDGIAAKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL R +   Q++  +      + GV+P T      +++D+S+PN+AKEMHVGHLRS
Sbjct: 82  FINIFLDRQWLSAQLEHALSAPKLGIAGVEPQT------IVIDYSAPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD   R L +LGH V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+
Sbjct: 136 TIIGDAAVRTLAFLGHKVIRANHVGDWGTQFGMLIAYLE-KVQNEHAGDLELSDLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
           E+KK +D+D  F +RA   VV LQ  D   +  W  + D++    Q+ YDRLNVTLT+  
Sbjct: 195 EAKKHYDDDAAFAERARGYVVKLQGGDEYCRTLWRRLVDITMSQNQRNYDRLNVTLTKDD 254

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L+ KGL    +G  +++ E   ++   PM ++  K DGG+ Y 
Sbjct: 255 VMGESLYNDMLPGIVADLKAKGLAVESEGATVVYLEEFRNKEGEPMGVIIQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   A+ ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLNANRVLYYIDSRQHQHLMQA 348



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/333 (38%), Positives = 192/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +  ++         L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----MPPRQLAEQVVQLL--------QLDGIAAKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL R +   Q++  +      + GV+P T      +++D+S+PN+AKEMHVGHLRS
Sbjct: 82   FINIFLDRQWLSAQLEHALSAPKLGIAGVEPQT------IVIDYSAPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD   R L +LGH V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+
Sbjct: 136  TIIGDAAVRTLAFLGHKVIRANHVGDWGTQFGMLIAYLE-KVQNEHAGDLELSDLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
            E+KK +D+D  F +RA   VV LQ  D   +  W  + D++    Q+ YDRLNVTLT+  
Sbjct: 195  EAKKHYDDDAAFAERARGYVVKLQGGDEYCRTLWRRLVDITMSQNQRNYDRLNVTLTKDD 254

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L+ KGL    +G  +++ E   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPGIVADLKAKGLAVESEGATVVYLEEFRNKEGEPMGVIIQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   A+ ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLNANRVLYYIDSRQHQHLMQ 347


>gi|238021933|ref|ZP_04602359.1| hypothetical protein GCWU000324_01837 [Kingella oralis ATCC 51147]
 gi|237866547|gb|EEP67589.1| hypothetical protein GCWU000324_01837 [Kingella oralis ATCC 51147]
          Length = 570

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 327/563 (58%), Gaps = 41/563 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            KFGDFQ N  M   K  K     +NP ++AQ IA +    LA NP    +    EVA PG
Sbjct: 34   KFGDFQINGVMGAAKSLK-----QNPRELAQKIAGL----LAANP----LFTAAEVAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+ L+  +   Q+     + +   T+ K   V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 81   FINLRLNPEFIAAQLS-AADSRLGVATVAKSKTVVIDYSSPNLAKEMHVGHLRSSIIGDS 139

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            ++R+L +LGH V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RF
Sbjct: 140  LARVLGFLGHKVIRQNHVGDWGTQFGMLVAYLAEQQQD--DANFRLADLEQFYRNAKVRF 197

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER----GES 748
            DEDE F   A + VV LQ  D      W    D+S +  + +Y++L + L ER    GES
Sbjct: 198  DEDENFANTAREYVVKLQGGDETVLSWWRKFVDISLQHAETVYEKLGL-LLERGDVAGES 256

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 803
             Y   ++ +V  L + GL   D+G K+M+      +D    P  I K DGGF Y T+DLA
Sbjct: 257  SYNDDLQNVVDELLQHGLAVDDNGTKVMFLDELKNQDGDPQPFIIQKQDGGFLYATTDLA 316

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD I+YV D  Q +HF+ L    +KAG L P     +F+GFG ++G+D K
Sbjct: 317  CVRHRVRNLHADRILYVVDTRQSLHFQQLFAATRKAGWL-PENVEAEFIGFGTMMGKDGK 375

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL ELLDE   R+   +K+KN   EL     ++  +AV  G +KYADLS 
Sbjct: 376  PFKTRSGDTVKLVELLDEATERATALVKEKN--PELPADTAAQIGRAVGIGAVKYADLSK 433

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NRN DY+F ++ ML   GNTA YL YAYTR+ S+ R AG  +E       + P+ ++   
Sbjct: 434  NRNSDYIFDWENMLSFEGNTAPYLQYAYTRVQSVLRRAGAWNE-------TAPLQIKEPL 486

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY ++  FS FY+ C  ++  AEG  +   
Sbjct: 487  EQQLAVELLKFEDVLNSVAETSFPHYLANYLYQLAALFSRFYEACPILK--AEGATRDT- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T + +K    +L I
Sbjct: 544  --RLQLAKLTGETLKTGLGLLGI 564



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/355 (39%), Positives = 198/355 (55%), Gaps = 26/355 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           KFGDFQ N  M   K  K     +NP ++AQ IA +    LA NP    +    EVA PG
Sbjct: 34  KFGDFQINGVMGAAKSLK-----QNPRELAQKIAGL----LAANP----LFTAAEVAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+ L+  +   Q+     + +   T+ K   V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 81  FINLRLNPEFIAAQLS-AADSRLGVATVAKSKTVVIDYSSPNLAKEMHVGHLRSSIIGDS 139

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           ++R+L +LGH V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RF
Sbjct: 140 LARVLGFLGHKVIRQNHVGDWGTQFGMLVAYLAEQQQD--DANFRLADLEQFYRNAKVRF 197

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER----GES 358
           DEDE F   A + VV LQ  D      W    D+S +  + +Y++L + L ER    GES
Sbjct: 198 DEDENFANTAREYVVKLQGGDETVLSWWRKFVDISLQHAETVYEKLGL-LLERGDVAGES 256

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 413
            Y   ++ +V  L + GL   D+G K+M+      +D    P  I K DGGF Y T+DLA
Sbjct: 257 SYNDDLQNVVDELLQHGLAVDDNGTKVMFLDELKNQDGDPQPFIIQKQDGGFLYATTDLA 316

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMN 468
            +R R+    AD I+YV D R      Q  A   K   +  +  ++  G    M 
Sbjct: 317 CVRHRVRNLHADRILYVVDTRQSLHFQQLFAATRKAGWLPENVEAEFIGFGTMMG 371



 Score =  233 bits (594), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 189/321 (58%), Gaps = 26/321 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            KFGDFQ N  M   K  K     +NP ++AQ IA +    LA NP    +    EVA PG
Sbjct: 34   KFGDFQINGVMGAAKSLK-----QNPRELAQKIAGL----LAANP----LFTAAEVAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+ L+  +   Q+     + +   T+ K   V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 81   FINLRLNPEFIAAQLS-AADSRLGVATVAKSKTVVIDYSSPNLAKEMHVGHLRSSIIGDS 139

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            ++R+L +LGH V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RF
Sbjct: 140  LARVLGFLGHKVIRQNHVGDWGTQFGMLVAYLAEQQQD--DANFRLADLEQFYRNAKVRF 197

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER----GES 1375
            DEDE F   A + VV LQ  D      W    D+S +  + +Y++L + L ER    GES
Sbjct: 198  DEDENFANTAREYVVKLQGGDETVLSWWRKFVDISLQHAETVYEKLGL-LLERGDVAGES 256

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
             Y   ++ +V  L + GL   D+G K+M+      +D    P  I K DGGF Y T+DLA
Sbjct: 257  SYNDDLQNVVDELLQHGLAVDDNGTKVMFLDELKNQDGDPQPFIIQKQDGGFLYATTDLA 316

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD I+YV D R
Sbjct: 317  CVRHRVRNLHADRILYVVDTR 337


>gi|238897849|ref|YP_002923528.1| arginine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
            (Acyrthosiphon pisum)]
 gi|259511649|sp|C4K487.1|SYR_HAMD5 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|229465606|gb|ACQ67380.1| arginine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
            (Acyrthosiphon pisum)]
          Length = 576

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/605 (38%), Positives = 356/605 (58%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++ +LSD   HA+ +A    G    S A  +     +FGD+Q N  M+  K      +
Sbjct: 1    MNIQLFLSDRIRHALIMA----GAPDDSDAQLHPSTKAQFGDYQANGVMSAAK-----KQ 51

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
            +  P ++A+ +          +  L+ +  K+E+A PGF+N+FL+  +  ++I+ + +  
Sbjct: 52   RIPPRELAERVLE--------HLDLSDIAKKVEIAGPGFINIFLNEQWISQKIESVFIGP 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P T     R+++D+S+PN+AKEMHVGHLRSTIIGD ++R L +LGH V+R NH+G
Sbjct: 104  KLGLTPVTPQ---RIVIDYSAPNVAKEMHVGHLRSTIIGDAMARTLSFLGHHVIRANHIG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+    D+  +   ++DL+ FY+E+KK +DEDEIF +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLEKIQHDHALEM-VLSDLEHFYREAKKHYDEDEIFAQRARDYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             DP  ++ W  + D++       Y+RL VTLT     GES Y   +  +V  L  KG+  
Sbjct: 220  GDPYCREMWRKLVDITMTQNHLSYERLKVTLTPEDMMGESLYNDMLPNIVEDLIAKGVAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             D G  +++ E   ++   PM +V  K DGG+ Y T+D+A ++ R E  KAD I+Y  D 
Sbjct: 280  KDQGSVLVFLEEYQNKIGEPMGVVIQKKDGGYLYATTDIACVKYRCETLKADRILYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H   +    + AG + P    ++   FG++LG+D K FKTR+G TVKLS+LLDE +
Sbjct: 340  RQNQHLAQVWTITRLAGYV-PESVSLEHHMFGMMLGKDGKPFKTRTGGTVKLSDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   ++ KN   +L  T+L+   QAVA G +KYADLS NR  DY+F +D+ML   GNT
Sbjct: 399  ERAGQLIRGKN--PDLNETDLNNLIQAVAIGAVKYADLSKNRTTDYIFDWDRMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAY+R+ S+ + +G++ + +      +PV ++ EKE +LA  LL+  +++  V R
Sbjct: 457  APYIQYAYSRVTSLFKKSGLDEKKIM-----SPVIIQEEKERSLAILLLQFEEMISTVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   H +C YLYD++T FS FY++C  +      K + +   RL LA  TAK +K     
Sbjct: 512  DGTPHLMCSYLYDLATRFSIFYEHCPIL----NAKNEQIRQSRLKLAWLTAKTLKLGLKN 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIET 572



 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 139/368 (37%), Positives = 214/368 (58%), Gaps = 32/368 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++ +LSD   HA+ +A    G    S A  +     +FGD+Q N  M+  K      +
Sbjct: 1   MNIQLFLSDRIRHALIMA----GAPDDSDAQLHPSTKAQFGDYQANGVMSAAK-----KQ 51

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
           +  P ++A+ +          +  L+ +  K+E+A PGF+N+FL+  +  ++I+ + +  
Sbjct: 52  RIPPRELAERVLE--------HLDLSDIAKKVEIAGPGFINIFLNEQWISQKIESVFIGP 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P T     R+++D+S+PN+AKEMHVGHLRSTIIGD ++R L +LGH V+R NH+G
Sbjct: 104 KLGLTPVTPQ---RIVIDYSAPNVAKEMHVGHLRSTIIGDAMARTLSFLGHHVIRANHIG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+    D+  +   ++DL+ FY+E+KK +DEDEIF +RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLEKIQHDHALEM-VLSDLEHFYREAKKHYDEDEIFAQRARDYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            DP  ++ W  + D++       Y+RL VTLT     GES Y   +  +V  L  KG+  
Sbjct: 220 GDPYCREMWRKLVDITMTQNHLSYERLKVTLTPEDMMGESLYNDMLPNIVEDLIAKGVAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            D G  +++ E   ++   PM +V  K DGG+ Y T+D+A ++ R E  KAD I+Y  D 
Sbjct: 280 KDQGSVLVFLEEYQNKIGEPMGVVIQKKDGGYLYATTDIACVKYRCETLKADRILYYIDS 339

Query: 434 RSYHQVLQ 441
           R    + Q
Sbjct: 340 RQNQHLAQ 347



 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 139/368 (37%), Positives = 214/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++ +LSD   HA+ +A    G    S A  +     +FGD+Q N  M+  K      +
Sbjct: 1    MNIQLFLSDRIRHALIMA----GAPDDSDAQLHPSTKAQFGDYQANGVMSAAK-----KQ 51

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
            +  P ++A+ +          +  L+ +  K+E+A PGF+N+FL+  +  ++I+ + +  
Sbjct: 52   RIPPRELAERVLE--------HLDLSDIAKKVEIAGPGFINIFLNEQWISQKIESVFIGP 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P T     R+++D+S+PN+AKEMHVGHLRSTIIGD ++R L +LGH V+R NH+G
Sbjct: 104  KLGLTPVTPQ---RIVIDYSAPNVAKEMHVGHLRSTIIGDAMARTLSFLGHHVIRANHIG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+    D+  +   ++DL+ FY+E+KK +DEDEIF +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLEKIQHDHALEM-VLSDLEHFYREAKKHYDEDEIFAQRARDYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             DP  ++ W  + D++       Y+RL VTLT     GES Y   +  +V  L  KG+  
Sbjct: 220  GDPYCREMWRKLVDITMTQNHLSYERLKVTLTPEDMMGESLYNDMLPNIVEDLIAKGVAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             D G  +++ E   ++   PM +V  K DGG+ Y T+D+A ++ R E  KAD I+Y  D 
Sbjct: 280  KDQGSVLVFLEEYQNKIGEPMGVVIQKKDGGYLYATTDIACVKYRCETLKADRILYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQNQHLAQ 347


>gi|204930959|ref|ZP_03221785.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Javiana str. GA_MM04042433]
 gi|452119892|ref|YP_007470140.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Javiana str. CFSAN001992]
 gi|204320003|gb|EDZ05208.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Javiana str. GA_MM04042433]
 gi|451908896|gb|AGF80702.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Javiana str. CFSAN001992]
          Length = 577

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PTL     ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPTLQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN +  +   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKNPN--MPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  244 bits (622), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PTL     ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASDRLGVSQPTLQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  242 bits (618), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/330 (40%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PTL     ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPTLQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|416050685|ref|ZP_11577061.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype e str. SC1083]
 gi|347993875|gb|EGY35204.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype e str. SC1083]
          Length = 577

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/568 (41%), Positives = 333/568 (58%), Gaps = 41/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----VNPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL   +  E I     N V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLKDGWLAENIG----NAVKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       + DL+AFY+ +
Sbjct: 138  IGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELCDLEAFYRAA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            KK +DED IF ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   
Sbjct: 197  KKHYDEDPIFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTS 800
            GES Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+
Sbjct: 257  GESLYNPMLPGIVEDLKKQGLAVKDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTT 316

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+AA + R E  KA+  +  +D  Q  H +      +KAG + P+  +++   FG++LG+
Sbjct: 317  DIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGK 375

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D K FKTRSGDTVKL++LLDE + R+ D L  + + T L+  E ++  +AV  G +KYAD
Sbjct: 376  DGKPFKTRSGDTVKLADLLDEAIERA-DVLISQ-KSTALSEQEKADVIEAVGIGSVKYAD 433

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  DYVF +D ML   GNTA Y+ YAYTRI SI   + IN  ++  A    P++L 
Sbjct: 434  LSKNRTTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQINPGEVEQA----PLTLT 489

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             EKE  LA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +    
Sbjct: 490  DEKERVLAIKLLQFEEAIQLVAKDGVPHVLCAYLYELAGVFSSFYEHCPILNSEDQ---- 545

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             V   RL LA  T + +K+  D+L I+T
Sbjct: 546  QVKLSRLKLALLTERTLKQGLDLLGIKT 573



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 191/332 (57%), Gaps = 30/332 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----VNPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL   +  E I     N V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTI
Sbjct: 82  FINIFLKDGWLAENIG----NAVKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       + DL+AFY+ +
Sbjct: 138 IGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELCDLEAFYRAA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           KK +DED IF ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   
Sbjct: 197 KKHYDEDPIFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTS 410
           GES Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+
Sbjct: 257 GESLYNPMLPGIVEDLKKQGLAVKDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTT 316

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           D+AA + R E  KA+  +  +D R    + QA
Sbjct: 317 DIAAAKYRYETLKANRALVFSDTRQSQHMQQA 348



 Score =  236 bits (602), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 190/331 (57%), Gaps = 30/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----VNPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL   +  E I     N V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLKDGWLAENIG----NAVKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       + DL+AFY+ +
Sbjct: 138  IGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELCDLEAFYRAA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            KK +DED IF ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   
Sbjct: 197  KKHYDEDPIFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTS 1427
            GES Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+
Sbjct: 257  GESLYNPMLPGIVEDLKKQGLAVKDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTT 316

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+AA + R E  KA+  +  +D R    + Q
Sbjct: 317  DIAAAKYRYETLKANRALVFSDTRQSQHMQQ 347


>gi|421432004|ref|ZP_15881581.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 8b-1]
 gi|437802876|ref|ZP_20838469.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 33944]
 gi|445349179|ref|ZP_21419958.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 13-1]
 gi|445362305|ref|ZP_21424146.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. PT23]
 gi|396051255|gb|EJI59773.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 8b-1]
 gi|435303611|gb|ELO79468.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 33944]
 gi|444875677|gb|ELX99874.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 13-1]
 gi|444884285|gb|ELY08126.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. PT23]
          Length = 577

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 331/569 (58%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLETAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLETAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLETAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|168462557|ref|ZP_02696488.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. SL317]
 gi|375000954|ref|ZP_09725294.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Infantis str. SARB27]
 gi|418760784|ref|ZP_13316937.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 35185]
 gi|418764819|ref|ZP_13320912.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 35199]
 gi|418772428|ref|ZP_13328432.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21539]
 gi|418775616|ref|ZP_13331574.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 33953]
 gi|418778119|ref|ZP_13334032.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 35188]
 gi|418783222|ref|ZP_13339070.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21559]
 gi|418800785|ref|ZP_13356433.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 35202]
 gi|419789379|ref|ZP_14315059.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. Levine 1]
 gi|419794375|ref|ZP_14319989.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. Levine 15]
 gi|195634216|gb|EDX52568.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. SL317]
 gi|353075642|gb|EHB41402.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Infantis str. SARB27]
 gi|392615118|gb|EIW97558.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. Levine 15]
 gi|392615164|gb|EIW97603.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. Levine 1]
 gi|392732542|gb|EIZ89753.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21539]
 gi|392741768|gb|EIZ98863.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 35199]
 gi|392742336|gb|EIZ99426.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 35185]
 gi|392748689|gb|EJA05675.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 33953]
 gi|392755933|gb|EJA12832.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 35188]
 gi|392757642|gb|EJA14528.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21559]
 gi|392783352|gb|EJA39977.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 35202]
          Length = 577

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 331/569 (58%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|238792571|ref|ZP_04636204.1| Arginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728206|gb|EEQ19727.1| Arginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 576

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/611 (38%), Positives = 347/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L+ +  K+E+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLSGIASKVEIAGPGFINIFLDRQWVAEKVEHALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKL++
Sbjct: 334  LYYIDTRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLAD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +   AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAIERAGKLIAEKN--PDMPADELKQVVDAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ + AGI+  +L     + P+ +  ++E ALA  LL+  +V
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFKRAGIDESNL-----TLPLVITEDREAALATRLLQFEEV 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESE----EIRQSRLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIQT 572



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 210/375 (56%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L+ +  K+E+A PGF+N+FL R +  E+++  +   
Sbjct: 53  -MQPRQLAEKVIELL--------DLSGIASKVEIAGPGFINIFLDRQWVAEKVEHALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDTRQHQHLMQA 348



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 209/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L+ +  K+E+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLSGIASKVEIAGPGFINIFLDRQWVAEKVEHALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDTRQHQHLMQ 347


>gi|238788535|ref|ZP_04632328.1| Arginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238723448|gb|EEQ15095.1| Arginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 576

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/611 (38%), Positives = 346/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   +++  +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIASKVEIAGPGFINIFLDRQWVASKVEHALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESDGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 334  LYYIDTRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAIERAGKLIAEKN--PDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ SI + AGI+   L     + P+ +  ++E ALA  LL+  +V
Sbjct: 451  ALDGNTAPYMQYAYTRVVSIFKRAGIDENSL-----TLPLVITEDREAALATRLLQFEEV 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  ++E   ++    RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESEESRQS----RLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIQT 572



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 208/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   +++  +   
Sbjct: 53  -MQPRQLAEKVIELL--------DLDGIASKVEIAGPGFINIFLDRQWVASKVEHALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESDGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDTRQHQHLMQA 348



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 207/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   +++  +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIASKVEIAGPGFINIFLDRQWVASKVEHALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESDGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDTRQHQHLMQ 347


>gi|167552453|ref|ZP_02346206.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Saintpaul str. SARA29]
 gi|168259814|ref|ZP_02681787.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Hadar str. RI_05P066]
 gi|198246204|ref|YP_002215175.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Dublin str. CT_02021853]
 gi|375118656|ref|ZP_09763823.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Dublin str. SD3246]
 gi|445148162|ref|ZP_21388672.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Dublin str. SL1438]
 gi|445150080|ref|ZP_21389541.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Dublin str. HWS51]
 gi|238690367|sp|B5FSM1.1|SYR_SALDC RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|197940720|gb|ACH78053.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Dublin str. CT_02021853]
 gi|205322924|gb|EDZ10763.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Saintpaul str. SARA29]
 gi|205351086|gb|EDZ37717.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Hadar str. RI_05P066]
 gi|326622923|gb|EGE29268.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Dublin str. SD3246]
 gi|444843758|gb|ELX69011.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Dublin str. SL1438]
 gi|444857291|gb|ELX82304.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Dublin str. HWS51]
          Length = 577

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 331/569 (58%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|377576210|ref|ZP_09805194.1| arginyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
 gi|377542242|dbj|GAB50359.1| arginyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
          Length = 576

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 243/611 (39%), Positives = 337/611 (55%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  T A+  A    G          +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQALLSDKVTQALIAA----GAPADCEPQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ + +        +  LA +  K+E+A PGF+N+FL   Y    ++  ++N 
Sbjct: 53   -MPPRQLAEQVLN--------HLDLAGIASKVEIAGPGFINIFLDPAYLSGLVESAVLNE 103

Query: 594  -----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
                  V P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RIGIPQVAPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KQQNENAGEMALADLEGFYREAKKHYDEDEAFAERARNYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT     GES Y   +  +V  L+ KG
Sbjct: 217  LQSGDEYCREMWRKLVDITMTQNQITYERLNVTLTRDDVMGESLYNPMLAGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGGF Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGFLYTTTDIACAKYRYETLHADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G TVKLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKDGKPFKTRAGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE L R+   +  KN   ++   EL     AV  G +KYADLS NR  DY+F +D ML
Sbjct: 393  LLDEALERARRLVAAKN--PDMPADELEALANAVGIGAVKYADLSKNRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ SI R AG+    L     + PV +  E+E ALA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVLSIFRKAGMEESML-----TAPVKITEEREAALAARLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            L  V R+   H +C YLYD++  FS FY++C  +  ++EG    V   RL LA  TAK +
Sbjct: 506  LTTVAREGTPHVMCAYLYDVAGLFSGFYEHCPILTAESEG----VRQSRLKLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K   D L I+T
Sbjct: 562  KIGLDTLGIQT 572



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/375 (38%), Positives = 204/375 (54%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  T A+  A    G          +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQALLSDKVTQALIAA----GAPADCEPQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ + +        +  LA +  K+E+A PGF+N+FL   Y    ++  ++N 
Sbjct: 53  -MPPRQLAEQVLN--------HLDLAGIASKVEIAGPGFINIFLDPAYLSGLVESAVLNE 103

Query: 204 -----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
                 V P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 RIGIPQVAPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KQQNENAGEMALADLEGFYREAKKHYDEDEAFAERARNYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT     GES Y   +  +V  L+ KG
Sbjct: 217 LQSGDEYCREMWRKLVDITMTQNQITYERLNVTLTRDDVMGESLYNPMLAGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGGF Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGFLYTTTDIACAKYRYETLHADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/374 (37%), Positives = 203/374 (54%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  T A+  A    G          +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQALLSDKVTQALIAA----GAPADCEPQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ + +        +  LA +  K+E+A PGF+N+FL   Y    ++  ++N 
Sbjct: 53   -MPPRQLAEQVLN--------HLDLAGIASKVEIAGPGFINIFLDPAYLSGLVESAVLNE 103

Query: 1221 -----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
                  V P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RIGIPQVAPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KQQNENAGEMALADLEGFYREAKKHYDEDEAFAERARNYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT     GES Y   +  +V  L+ KG
Sbjct: 217  LQSGDEYCREMWRKLVDITMTQNQITYERLNVTLTRDDVMGESLYNPMLAGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGGF Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGFLYTTTDIACAKYRYETLHADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|238754848|ref|ZP_04616198.1| Arginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706859|gb|EEP99226.1| Arginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 577

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/611 (38%), Positives = 346/611 (56%), Gaps = 55/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ + +++         L  +  K+E+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAEKVVALL--------DLEGISSKVEIAGPGFINIFLDRQWIAEKVEYALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      V++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGIAPVEPQT------VVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLEVFYREAKKHYDEDEAFAARARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRAMWRKLVDITMAQNQISYDRLNVTLTQDDVMGESLYNSMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TV+LS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVRLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL+E   AV  G +KYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAIERAGKLIAEKN--PDMPANELAEVVNAVGIGAVKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ + AG+  E     + + P+ +  E+E ALA  LL+  + 
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFKRAGVVDER----SLTLPLVITEEREAALATRLLQFEET 506

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  D+E   ++    RL LA  TAK +
Sbjct: 507  ITNVAREGTPHVMCAYLYDVAGLFSSFYEHCQILNADSEESRQS----RLKLAMLTAKTL 562

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 563  KQGLDTLGIQT 573



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 209/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ + +++         L  +  K+E+A PGF+N+FL R +  E+++  +   
Sbjct: 53  -MQPRQLAEKVVALL--------DLEGISSKVEIAGPGFINIFLDRQWIAEKVEYALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      V++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104 KLGIAPVEPQT------VVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DEDE F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLEVFYREAKKHYDEDEAFAARARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRAMWRKLVDITMAQNQISYDRLNVTLTQDDVMGESLYNSMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 208/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ + +++         L  +  K+E+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAEKVVALL--------DLEGISSKVEIAGPGFINIFLDRQWIAEKVEYALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      V++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGIAPVEPQT------VVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLEVFYREAKKHYDEDEAFAARARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRAMWRKLVDITMAQNQISYDRLNVTLTQDDVMGESLYNSMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|83643984|ref|YP_432419.1| arginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|109894996|sp|Q2SMY0.1|SYR_HAHCH RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|83632027|gb|ABC27994.1| arginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 578

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 346/602 (57%), Gaps = 44/602 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L  +    +  A    G    S A        +FGD+Q N  M   K  K      NP +
Sbjct: 3    LQQLLEQKISAALHAAGAPEGSPAIVKPSGKPQFGDYQANGVMGAAKALK-----MNPRE 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPPT 599
            +A  +  V+         L  + +K+E+A PGF+N+FLS+ +  + ++ ++ +  +  P 
Sbjct: 58   LATKVLDVL--------DLGDMAEKVEIAGPGFINIFLSKDWMSQSLRQVLADPRLTIPL 109

Query: 600  LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
             + K  V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NHVGDWGTQFGM
Sbjct: 110  DSPKQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFLGHRVIRQNHVGDWGTQFGM 169

Query: 660  LIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 718
            L+A++   K  +  T S  +ADL+ FY+++K  FDED  FK  A Q VV LQ  D +   
Sbjct: 170  LLAYMNKLKAENQQTLSMELADLENFYRQAKTCFDEDPEFKDSARQYVVKLQSGDQECVS 229

Query: 719  AWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
             W+   D+S +  + +Y+RLNV+LT      ES Y + +  ++  L +KGLL   DG + 
Sbjct: 230  LWKTFIDISLQHCEDVYERLNVSLTRADVMPESAYNEDLPNVIDDLREKGLLTNSDGAEC 289

Query: 776  MW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            ++     G+D  ++P+ + KSDGG+ Y T+DLAA+R R    KA+ ++Y  D  Q +H  
Sbjct: 290  VFMDEFKGKDDETLPLIVKKSDGGYLYATTDLAALRYRERVLKANRVLYFVDARQSLHLN 349

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
             +    +KAG ++P+ + ++ + FG+VLG D K FKTR G TVKL++LL E   R+   +
Sbjct: 350  QVYAAGRKAGFVSPDMS-LEHMAFGMVLGADGKPFKTRDGGTVKLADLLTEAQGRAYAVV 408

Query: 891  KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            K KN   E+   EL+     V    +KYADLS NR+ DY+FSFD ML   GNTA Y+ YA
Sbjct: 409  KGKN--PEMPEEELNRIAHVVGMAAVKYADLSKNRSSDYIFSFDAMLSLEGNTAPYVQYA 466

Query: 951  YTRIASIARTAGINS----EDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            Y+R+ ++ +   + +     DL++A    P+      E ALA  LL+ N++L  V  + C
Sbjct: 467  YSRVVNVFKKGEVGNLTFEGDLQLA---EPI------ERALAVRLLQFNEILHSVASEGC 517

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLYD+S  F+ FY+ C  ++ +     + V + RL+L+   AK +K+  D+L I
Sbjct: 518  PHILCGYLYDLSKEFASFYEGCPVLKAE-----EPVRSSRLMLSLLIAKTLKQGLDLLGI 572

Query: 1067 RT 1068
             T
Sbjct: 573  ET 574



 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 224/416 (53%), Gaps = 26/416 (6%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L  +    +  A    G    S A        +FGD+Q N  M   K  K      NP +
Sbjct: 3   LQQLLEQKISAALHAAGAPEGSPAIVKPSGKPQFGDYQANGVMGAAKALK-----MNPRE 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPPT 209
           +A  +  V+         L  + +K+E+A PGF+N+FLS+ +  + ++ ++ +  +  P 
Sbjct: 58  LATKVLDVL--------DLGDMAEKVEIAGPGFINIFLSKDWMSQSLRQVLADPRLTIPL 109

Query: 210 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
            + K  V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NHVGDWGTQFGM
Sbjct: 110 DSPKQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFLGHRVIRQNHVGDWGTQFGM 169

Query: 270 LIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 328
           L+A++   K  +  T S  +ADL+ FY+++K  FDED  FK  A Q VV LQ  D +   
Sbjct: 170 LLAYMNKLKAENQQTLSMELADLENFYRQAKTCFDEDPEFKDSARQYVVKLQSGDQECVS 229

Query: 329 AWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
            W+   D+S +  + +Y+RLNV+LT      ES Y + +  ++  L +KGLL   DG + 
Sbjct: 230 LWKTFIDISLQHCEDVYERLNVSLTRADVMPESAYNEDLPNVIDDLREKGLLTNSDGAEC 289

Query: 386 MW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVL 440
           ++     G+D  ++P+ + KSDGG+ Y T+DLAA+R R    KA+ ++Y  D R    + 
Sbjct: 290 VFMDEFKGKDDETLPLIVKKSDGGYLYATTDLAALRYRERVLKANRVLYFVDARQSLHLN 349

Query: 441 QAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTHAVQVAF 493
           Q  A   K   +S   S +       +     P + R      L+D+ T A   A+
Sbjct: 350 QVYAAGRKAGFVSPDMSLEHMAFGMVLGADGKPFKTRDGGTVKLADLLTEAQGRAY 405



 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 137/354 (38%), Positives = 204/354 (57%), Gaps = 23/354 (6%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L  +    +  A    G    S A        +FGD+Q N  M   K  K      NP +
Sbjct: 3    LQQLLEQKISAALHAAGAPEGSPAIVKPSGKPQFGDYQANGVMGAAKALK-----MNPRE 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPPT 1226
            +A  +  V+         L  + +K+E+A PGF+N+FLS+ +  + ++ ++ +  +  P 
Sbjct: 58   LATKVLDVL--------DLGDMAEKVEIAGPGFINIFLSKDWMSQSLRQVLADPRLTIPL 109

Query: 1227 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
             + K  V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NHVGDWGTQFGM
Sbjct: 110  DSPKQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFLGHRVIRQNHVGDWGTQFGM 169

Query: 1287 LIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 1345
            L+A++   K  +  T S  +ADL+ FY+++K  FDED  FK  A Q VV LQ  D +   
Sbjct: 170  LLAYMNKLKAENQQTLSMELADLENFYRQAKTCFDEDPEFKDSARQYVVKLQSGDQECVS 229

Query: 1346 AWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
             W+   D+S +  + +Y+RLNV+LT      ES Y + +  ++  L +KGLL   DG + 
Sbjct: 230  LWKTFIDISLQHCEDVYERLNVSLTRADVMPESAYNEDLPNVIDDLREKGLLTNSDGAEC 289

Query: 1403 MW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            ++     G+D  ++P+ + KSDGG+ Y T+DLAA+R R    KA+ ++Y  D R
Sbjct: 290  VFMDEFKGKDDETLPLIVKKSDGGYLYATTDLAALRYRERVLKANRVLYFVDAR 343


>gi|219871399|ref|YP_002475774.1| arginyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691603|gb|ACL32826.1| arginyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 548

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/564 (40%), Positives = 334/564 (59%), Gaps = 35/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +          N  L  + +K+E+A PG
Sbjct: 8    QFGDYQANGIMGAAKKLG-----LNPREFAQKVVD--------NVDLNGIAEKLEIAGPG 54

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL+  +  +Q ++          LN+   V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 55   FINIFLAPTWLAQQTENAFSGDKLGINLNQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDG 114

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K+ +
Sbjct: 115  VVRALEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRTAKEHY 173

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            D DE+F ++A   VV LQ  D   +  W+ + +++ +  Q  Y+RLNVTLTE    GES 
Sbjct: 174  DSDEVFAEKARNYVVKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESL 233

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 234  YNPMLPEIVADLKAQGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 293

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KAD  +  +D  Q  H +      +KAG + P+   ++   FG++LG+D K 
Sbjct: 294  AKYRFETLKADRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFSLEHHNFGMMLGKDGKP 352

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TVKL++LLDE + R+   + +KN   +LT  E     +AVA G +KY+DLS N
Sbjct: 353  FKTRTGGTVKLADLLDEAVERAEKLIAEKN--PDLTACEKQAVVEAVAIGAVKYSDLSKN 410

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ SI   AGI+   L     +  + L  EKE
Sbjct: 411  RTTDYVFDWDNMLSFEGNTAPYMQYAYTRVRSIFSRAGIDPNSL-----TANIVLIDEKE 465

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+  + + +V +D   H LC+YLY+++  FS FY+ C  +  +AE  IK    
Sbjct: 466  RNLAIKLLQFEEAVTVVAKDGTPHVLCQYLYELAGIFSSFYEACPIL--NAEESIK---Q 520

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  D+L I+T
Sbjct: 521  SRLKLAHLTAKTLKQGLDLLGIKT 544



 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/400 (35%), Positives = 219/400 (54%), Gaps = 25/400 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +          N  L  + +K+E+A PG
Sbjct: 8   QFGDYQANGIMGAAKKLG-----LNPREFAQKVVD--------NVDLNGIAEKLEIAGPG 54

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL+  +  +Q ++          LN+   V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 55  FINIFLAPTWLAQQTENAFSGDKLGINLNQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDG 114

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K+ +
Sbjct: 115 VVRALEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRTAKEHY 173

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           D DE+F ++A   VV LQ  D   +  W+ + +++ +  Q  Y+RLNVTLTE    GES 
Sbjct: 174 DSDEVFAEKARNYVVKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESL 233

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 234 YNPMLPEIVADLKAQGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 293

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R E  KAD  +  +D R    + QA     K   +  S S +       +     P 
Sbjct: 294 AKYRFETLKADRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHHNFGMMLGKDGKPF 353

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 511
           + R      L+D+   AV+ A   + +K   + +  ++ V
Sbjct: 354 KTRTGGTVKLADLLDEAVERAEKLIAEKNPDLTACEKQAV 393



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 193/327 (59%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +          N  L  + +K+E+A PG
Sbjct: 8    QFGDYQANGIMGAAKKLG-----LNPREFAQKVVD--------NVDLNGIAEKLEIAGPG 54

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL+  +  +Q ++          LN+   V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 55   FINIFLAPTWLAQQTENAFSGDKLGINLNQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDG 114

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K+ +
Sbjct: 115  VVRALEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRTAKEHY 173

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            D DE+F ++A   VV LQ  D   +  W+ + +++ +  Q  Y+RLNVTLTE    GES 
Sbjct: 174  DSDEVFAEKARNYVVKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESL 233

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG  +++ +   ++   PM ++  K DGGF Y T+D+AA
Sbjct: 234  YNPMLPEIVADLKAQGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAA 293

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KAD  +  +D R    + Q
Sbjct: 294  AKYRFETLKADRALVFSDTRQSQHMQQ 320


>gi|332161947|ref|YP_004298524.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
            105.5R(r)]
 gi|325666177|gb|ADZ42821.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
            105.5R(r)]
          Length = 576

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 348/608 (57%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIARKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAIERAGKLIAEKN--PDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ S+ + AG++  +L +     P+ +  ++E ALA  LL+  +V+  
Sbjct: 454  GNTAPYMQYAYTRVVSVFKRAGVDESNLIL-----PLVITEDREAALATRLLQFEEVITT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  D+E   ++    RL LA  TAK +K+ 
Sbjct: 509  VAREGTPHVMCSYLYDLAGLFSSFYEHCQILNADSEESRQS----RLKLAMLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             D L I+T
Sbjct: 565  LDTLGIQT 572



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/372 (37%), Positives = 209/372 (56%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53  -MQPRQLAEKVIELL--------DLDGIARKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104 KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220 GDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280 ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/371 (37%), Positives = 208/371 (56%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIARKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|161613533|ref|YP_001587498.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Paratyphi B str. SPB7]
 gi|197263437|ref|ZP_03163511.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Saintpaul str. SARA23]
 gi|189083546|sp|A9MUA9.1|SYR_SALPB RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|161362897|gb|ABX66665.1| hypothetical protein SPAB_01253 [Salmonella enterica subsp. enterica
            serovar Paratyphi B str. SPB7]
 gi|197241692|gb|EDY24312.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Saintpaul str. SARA23]
          Length = 577

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 331/569 (58%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|157373673|ref|YP_001472273.1| arginyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083550|sp|A8FQM2.1|SYR_SHESH RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|157316047|gb|ABV35145.1| Arginine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 581

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/567 (41%), Positives = 341/567 (60%), Gaps = 43/567 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K+      +KNP ++AQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41   GDFATNLAMMLTKV-----ARKNPRELAQ----LIIDSLPQDSQVAKV----EIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F+       Q+   + +   G+Q P   +   V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDENALASQLMAALNDDHLGIQLP---EPQTVVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LE+ GH+V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFQGHNVIRQNHVGDWGTQFGMLLAYMEELRAENGEQAQMELSDLETFYRAAKV 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE E F  RA + VV+LQ  D    K W    D+S      +Y+RL V+LT    RGE
Sbjct: 205  RFDESEDFAIRARKLVVSLQSGDEYCNKLWREFNDISLSHCHDVYERLGVSLTRKDVRGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ KGLL   +G K+++ +     D   +P+ I K+DGG+ Y TSDL
Sbjct: 265  STYNDDLEQVVKDLDAKGLLSESNGAKVVFQDEFKTKDGDPLPVIIQKADGGYLYATSDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD  +Y  DL QG+HF+ + + A+ A  +NP+ + ++ +GFG + G+D 
Sbjct: 325  AAMRYRSNVLKADRALYFVDLRQGLHFQQVFKLARTAEFINPDMS-LEHMGFGTMNGDDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTRSG  VKL +LL E   R+L+ ++ KN   ++   EL +  + V    +KYADLS
Sbjct: 384  RPFKTRSGGVVKLVDLLTEADTRALELVRSKN--PDMDQAELEKIAKVVGISSVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI-ARTAGINSEDLRVAAQSTPVSLEH 981
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I  R   I+  D +       + L+H
Sbjct: 442  KNRASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRATDIDLSDAK-------MQLDH 494

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE  L   L +  +VL  +      H LC YL++++ AFS FY+ C  +  ++E + K+
Sbjct: 495  DKEKDLGNKLAQFGEVLSRMVTKGQPHALCGYLFELAGAFSSFYEACPVLAAESEEQKKS 554

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RLLL++ TAK +K+  D+L I T
Sbjct: 555  ----RLLLSQLTAKTLKQGLDLLGIET 577



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 139/332 (41%), Positives = 197/332 (59%), Gaps = 31/332 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K+      +KNP ++AQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41  GDFATNLAMMLTKV-----ARKNPRELAQ----LIIDSLPQDSQVAKV----EIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F+       Q+   + +   G+Q P   +   V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFIDENALASQLMAALNDDHLGIQLP---EPQTVVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LE+ GH+V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145 SVVRALEFQGHNVIRQNHVGDWGTQFGMLLAYMEELRAENGEQAQMELSDLETFYRAAKV 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE E F  RA + VV+LQ  D    K W    D+S      +Y+RL V+LT    RGE
Sbjct: 205 RFDESEDFAIRARKLVVSLQSGDEYCNKLWREFNDISLSHCHDVYERLGVSLTRKDVRGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ KGLL   +G K+++ +     D   +P+ I K+DGG+ Y TSDL
Sbjct: 265 STYNDDLEQVVKDLDAKGLLSESNGAKVVFQDEFKTKDGDPLPVIIQKADGGYLYATSDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           AA+R R    KAD  +Y  D R    + QV +
Sbjct: 325 AAMRYRSNVLKADRALYFVDLRQGLHFQQVFK 356



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 139/332 (41%), Positives = 197/332 (59%), Gaps = 31/332 (9%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K+      +KNP ++AQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41   GDFATNLAMMLTKV-----ARKNPRELAQ----LIIDSLPQDSQVAKV----EIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F+       Q+   + +   G+Q P   +   V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDENALASQLMAALNDDHLGIQLP---EPQTVVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LE+ GH+V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFQGHNVIRQNHVGDWGTQFGMLLAYMEELRAENGEQAQMELSDLETFYRAAKV 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE E F  RA + VV+LQ  D    K W    D+S      +Y+RL V+LT    RGE
Sbjct: 205  RFDESEDFAIRARKLVVSLQSGDEYCNKLWREFNDISLSHCHDVYERLGVSLTRKDVRGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ KGLL   +G K+++ +     D   +P+ I K+DGG+ Y TSDL
Sbjct: 265  STYNDDLEQVVKDLDAKGLLSESNGAKVVFQDEFKTKDGDPLPVIIQKADGGYLYATSDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            AA+R R    KAD  +Y  D R    + QV +
Sbjct: 325  AAMRYRSNVLKADRALYFVDLRQGLHFQQVFK 356


>gi|415763954|ref|ZP_11482261.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            D17P-3]
 gi|348654421|gb|EGY70045.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            D17P-3]
          Length = 577

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/564 (40%), Positives = 333/564 (59%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + S           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLS--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +  T    ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHTSEMELSDLEAFYRAAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KA   +  +D  Q  H +      +KAG + P+  ++++  FG++LG+D K 
Sbjct: 321  AKYRYETLKASRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEYKNFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL++LLDE + R+   +  K+  T L+  E ++  +AV  G +KYADLS N
Sbjct: 380  FKTRSGDTVKLADLLDEAIERAGVLISQKS--TALSEQEKADVIEAVGIGSVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI   + IN  ++  A+    ++L +EKE
Sbjct: 438  RITDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQINPAEVEQAS----LTLTNEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +     V  
Sbjct: 494  RALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEHCPILNNEDQ----QVKL 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T + +K+  D+L I+T
Sbjct: 550  SRLKLALLTERTLKQGLDLLGIKT 573



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 189/328 (57%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + S           L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----INPREFAQLVLS--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +  T    ++DL+AFY+ +KK +
Sbjct: 142 VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHTSEMELSDLEAFYRAAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201 DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261 YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E  KA   +  +D R    + QA
Sbjct: 321 AKYRYETLKASRALVFSDTRQSQHMQQA 348



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 188/327 (57%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + S           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLS--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +  T    ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHTSEMELSDLEAFYRAAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KA   +  +D R    + Q
Sbjct: 321  AKYRYETLKASRALVFSDTRQSQHMQQ 347


>gi|238799211|ref|ZP_04642660.1| Arginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238716940|gb|EEQ08807.1| Arginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 608

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/611 (38%), Positives = 344/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 33   VNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 84

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   +++  +   
Sbjct: 85   -MQPRQLAEKVIELL--------DLEGIASKVEIAGPGFINIFLDRQWVASKVEHALTAP 135

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 136  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 189

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 190  HVGDWGTQFGMLIAYLE-KMQNESASDMDLSDLELFYQQAKKTYDEDEEFALRARAYVVK 248

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 249  LQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKG 308

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 309  LAVESDGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 365

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 366  LYYIDTRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 424

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML
Sbjct: 425  LLDEAIERAGKLIAEKN--PDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNML 482

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ + AG++   L     + P+ +  ++E ALA  LL+  +V
Sbjct: 483  ALDGNTAPYMQYAYTRVVSVFKRAGVDESSL-----TLPLVITEDREAALATRLLQFEEV 537

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +
Sbjct: 538  ITTVAREGTPHVMCSYLYDVAGLFSSFYEHCQILNAESE----EIRQSRLKLAMLTAKTL 593

Query: 1058 KKCFDILNIRT 1068
            K+  D L IRT
Sbjct: 594  KQGLDTLGIRT 604



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/375 (37%), Positives = 207/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 33  VNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 84

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   +++  +   
Sbjct: 85  -MQPRQLAEKVIELL--------DLEGIASKVEIAGPGFINIFLDRQWVASKVEHALTAP 135

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 136 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 189

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 190 HVGDWGTQFGMLIAYLE-KMQNESASDMDLSDLELFYQQAKKTYDEDEEFALRARAYVVK 248

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 249 LQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKG 308

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 309 LAVESDGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 365

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 366 LYYIDTRQHQHLMQA 380



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 206/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 33   VNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 84

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   +++  +   
Sbjct: 85   -MQPRQLAEKVIELL--------DLEGIASKVEIAGPGFINIFLDRQWVASKVEHALTAP 135

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 136  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 189

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 190  HVGDWGTQFGMLIAYLE-KMQNESASDMDLSDLELFYQQAKKTYDEDEEFALRARAYVVK 248

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 249  LQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKG 308

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 309  LAVESDGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 365

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 366  LYYIDTRQHQHLMQ 379


>gi|200390366|ref|ZP_03216977.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Virchow str. SL491]
 gi|207856570|ref|YP_002243221.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. P125109]
 gi|421358615|ref|ZP_15808912.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 622731-39]
 gi|421362585|ref|ZP_15812837.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 639016-6]
 gi|421367785|ref|ZP_15817978.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 640631]
 gi|421370547|ref|ZP_15820712.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 77-0424]
 gi|421378035|ref|ZP_15828124.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 607307-6]
 gi|421382644|ref|ZP_15832690.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 485549-17]
 gi|421387628|ref|ZP_15837627.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 596866-22]
 gi|421391731|ref|ZP_15841697.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 596866-70]
 gi|421395065|ref|ZP_15845004.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 629164-26]
 gi|421401329|ref|ZP_15851205.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 629164-37]
 gi|421403069|ref|ZP_15852923.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 639672-46]
 gi|421410436|ref|ZP_15860217.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 639672-50]
 gi|421412701|ref|ZP_15862455.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 77-1427]
 gi|421416694|ref|ZP_15866413.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 77-2659]
 gi|421421688|ref|ZP_15871356.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 78-1757]
 gi|421425136|ref|ZP_15874772.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 22510-1]
 gi|421436580|ref|ZP_15886107.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648905 5-18]
 gi|421441358|ref|ZP_15890828.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648901 6-18]
 gi|421446705|ref|ZP_15896117.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 50-3079]
 gi|421447814|ref|ZP_15897210.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 58-6482]
 gi|436596619|ref|ZP_20512565.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 22704]
 gi|436730359|ref|ZP_20519274.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SE30663]
 gi|436797522|ref|ZP_20523268.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CHS44]
 gi|436811430|ref|ZP_20530310.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1882]
 gi|436815801|ref|ZP_20533352.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1884]
 gi|436838948|ref|ZP_20537268.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1594]
 gi|436851395|ref|ZP_20541994.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1566]
 gi|436858159|ref|ZP_20546679.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1580]
 gi|436865334|ref|ZP_20551301.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1543]
 gi|436875493|ref|ZP_20557400.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1441]
 gi|436883384|ref|ZP_20561813.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1810]
 gi|436887756|ref|ZP_20564085.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1558]
 gi|436896454|ref|ZP_20569210.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1018]
 gi|436906433|ref|ZP_20575279.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1010]
 gi|436911618|ref|ZP_20577447.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1729]
 gi|436921093|ref|ZP_20583564.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_0895]
 gi|436930523|ref|ZP_20588748.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_0899]
 gi|436935570|ref|ZP_20591010.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1457]
 gi|436942759|ref|ZP_20595705.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1747]
 gi|436951748|ref|ZP_20600803.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_0968]
 gi|436964543|ref|ZP_20606179.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1444]
 gi|436971480|ref|ZP_20609873.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1445]
 gi|436985550|ref|ZP_20615070.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1559]
 gi|436991483|ref|ZP_20617494.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1565]
 gi|437012304|ref|ZP_20624817.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1808]
 gi|437020726|ref|ZP_20627537.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1811]
 gi|437029982|ref|ZP_20631164.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_0956]
 gi|437042379|ref|ZP_20635970.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1455]
 gi|437052456|ref|ZP_20641879.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1575]
 gi|437058090|ref|ZP_20644937.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1725]
 gi|437067403|ref|ZP_20650323.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1745]
 gi|437075781|ref|ZP_20654144.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1791]
 gi|437086656|ref|ZP_20660665.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1795]
 gi|437095368|ref|ZP_20664472.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 576709]
 gi|437100424|ref|ZP_20665911.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 635290-58]
 gi|437134503|ref|ZP_20678927.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 607308-19]
 gi|437139746|ref|ZP_20682010.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 607307-2]
 gi|437147114|ref|ZP_20686666.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 607308-9]
 gi|437155405|ref|ZP_20691624.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 629163]
 gi|437158120|ref|ZP_20693062.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SE15-1]
 gi|437171679|ref|ZP_20700783.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_N202]
 gi|437177348|ref|ZP_20703828.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_56-3991]
 gi|437187556|ref|ZP_20710037.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_76-3618]
 gi|437239451|ref|ZP_20714273.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 13183-1]
 gi|437261146|ref|ZP_20718216.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_81-2490]
 gi|437265746|ref|ZP_20720561.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SL909]
 gi|437281974|ref|ZP_20728975.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SL913]
 gi|437286589|ref|ZP_20730243.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_69-4941]
 gi|437308439|ref|ZP_20735480.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 638970-15]
 gi|437328688|ref|ZP_20740983.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 17927]
 gi|437344049|ref|ZP_20746063.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CHS4]
 gi|437431637|ref|ZP_20756103.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 543463 22-17]
 gi|437433178|ref|ZP_20756271.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 543463 40-18]
 gi|437462603|ref|ZP_20762754.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 561362 1-1]
 gi|437478532|ref|ZP_20767545.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 642044 4-1]
 gi|437487169|ref|ZP_20769850.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 642046 4-7]
 gi|437506357|ref|ZP_20775640.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648898 4-5]
 gi|437538431|ref|ZP_20782001.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648899 3-17]
 gi|437553338|ref|ZP_20783980.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648900 1-16]
 gi|437575224|ref|ZP_20790020.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648901 1-17]
 gi|437585779|ref|ZP_20793059.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648901 39-2]
 gi|437601489|ref|ZP_20797733.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648902 6-8]
 gi|437617260|ref|ZP_20802896.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648903 1-6]
 gi|437678314|ref|ZP_20817673.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 642044 8-1]
 gi|437688247|ref|ZP_20819681.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 561362 9-7]
 gi|438048475|ref|ZP_20856106.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 50-5646]
 gi|438090068|ref|ZP_20860370.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 81-2625]
 gi|438101202|ref|ZP_20864153.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 62-1976]
 gi|438112462|ref|ZP_20869059.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 53-407]
 gi|445167824|ref|ZP_21394654.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SE8a]
 gi|445217323|ref|ZP_21402246.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 20037]
 gi|445219930|ref|ZP_21402869.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SE10]
 gi|445338562|ref|ZP_21416135.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 18569]
 gi|238690436|sp|B5R142.1|SYR_SALEP RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|199602811|gb|EDZ01357.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Virchow str. SL491]
 gi|206708373|emb|CAR32677.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. P125109]
 gi|395986305|gb|EJH95469.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 640631]
 gi|395987055|gb|EJH96218.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 622731-39]
 gi|395990409|gb|EJH99540.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 639016-6]
 gi|395997340|gb|EJI06381.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 607307-6]
 gi|395997752|gb|EJI06792.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 485549-17]
 gi|396006630|gb|EJI15593.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 77-0424]
 gi|396008453|gb|EJI17387.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 596866-22]
 gi|396010694|gb|EJI19606.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 596866-70]
 gi|396013802|gb|EJI22689.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 629164-26]
 gi|396021394|gb|EJI30220.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 629164-37]
 gi|396022569|gb|EJI31382.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 639672-50]
 gi|396030100|gb|EJI38835.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 639672-46]
 gi|396039789|gb|EJI48413.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 77-1427]
 gi|396041003|gb|EJI49626.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 78-1757]
 gi|396044871|gb|EJI53466.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 77-2659]
 gi|396052922|gb|EJI61427.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648905 5-18]
 gi|396057606|gb|EJI66076.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 22510-1]
 gi|396062287|gb|EJI70700.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 50-3079]
 gi|396064961|gb|EJI73344.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648901 6-18]
 gi|396074111|gb|EJI82402.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 58-6482]
 gi|434960864|gb|ELL54206.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CHS44]
 gi|434964061|gb|ELL57083.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1882]
 gi|434973917|gb|ELL66305.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1884]
 gi|434976932|gb|ELL69108.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 22704]
 gi|434980256|gb|ELL72177.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1594]
 gi|434980678|gb|ELL72587.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SE30663]
 gi|434986697|gb|ELL78348.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1566]
 gi|434990311|gb|ELL81861.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1580]
 gi|434995084|gb|ELL86401.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1441]
 gi|434996369|gb|ELL87685.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1543]
 gi|435001829|gb|ELL92918.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1810]
 gi|435009466|gb|ELM00252.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1558]
 gi|435015010|gb|ELM05567.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1010]
 gi|435016343|gb|ELM06869.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1018]
 gi|435025863|gb|ELM15994.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1729]
 gi|435027215|gb|ELM17344.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_0895]
 gi|435032178|gb|ELM22122.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_0899]
 gi|435038408|gb|ELM28189.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1457]
 gi|435042958|gb|ELM32675.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1747]
 gi|435048400|gb|ELM37965.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1444]
 gi|435052215|gb|ELM41717.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_0968]
 gi|435057769|gb|ELM47138.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1445]
 gi|435062390|gb|ELM51572.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1559]
 gi|435063624|gb|ELM52772.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1808]
 gi|435068060|gb|ELM57089.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1565]
 gi|435079354|gb|ELM68065.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1811]
 gi|435083016|gb|ELM71627.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_0956]
 gi|435084304|gb|ELM72890.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1455]
 gi|435091056|gb|ELM79457.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1575]
 gi|435093903|gb|ELM82242.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1725]
 gi|435096124|gb|ELM84397.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1745]
 gi|435102802|gb|ELM90905.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1795]
 gi|435105078|gb|ELM93115.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CDC_2010K_1791]
 gi|435109745|gb|ELM97691.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 576709]
 gi|435119982|gb|ELN07584.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 607308-19]
 gi|435125220|gb|ELN12668.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 635290-58]
 gi|435131151|gb|ELN18378.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 607307-2]
 gi|435134744|gb|ELN21870.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 607308-9]
 gi|435138273|gb|ELN25300.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 629163]
 gi|435146201|gb|ELN32995.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_N202]
 gi|435152782|gb|ELN39405.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SE15-1]
 gi|435155028|gb|ELN41586.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_56-3991]
 gi|435156800|gb|ELN43271.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_76-3618]
 gi|435163602|gb|ELN49738.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_81-2490]
 gi|435168592|gb|ELN54424.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SL913]
 gi|435177110|gb|ELN62442.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SL909]
 gi|435181873|gb|ELN66912.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 13183-1]
 gi|435184486|gb|ELN69415.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CVM_69-4941]
 gi|435186034|gb|ELN70890.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 638970-15]
 gi|435190951|gb|ELN75523.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 17927]
 gi|435191103|gb|ELN75670.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. CHS4]
 gi|435198648|gb|ELN82805.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 543463 22-17]
 gi|435214259|gb|ELN97084.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 543463 40-18]
 gi|435219269|gb|ELO01632.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 561362 1-1]
 gi|435221351|gb|ELO03624.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 642044 4-1]
 gi|435233070|gb|ELO14127.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 642046 4-7]
 gi|435234548|gb|ELO15402.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648898 4-5]
 gi|435238768|gb|ELO19388.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648899 3-17]
 gi|435244985|gb|ELO25092.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648900 1-16]
 gi|435245189|gb|ELO25276.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648901 1-17]
 gi|435260899|gb|ELO40088.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648901 39-2]
 gi|435261025|gb|ELO40187.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648903 1-6]
 gi|435261259|gb|ELO40420.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 648902 6-8]
 gi|435273444|gb|ELO51713.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 642044 8-1]
 gi|435282964|gb|ELO60562.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 561362 9-7]
 gi|435316639|gb|ELO89752.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 81-2625]
 gi|435319259|gb|ELO92112.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 50-5646]
 gi|435324774|gb|ELO96702.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 62-1976]
 gi|435330540|gb|ELP01806.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 53-407]
 gi|444857559|gb|ELX82564.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 20037]
 gi|444865121|gb|ELX89901.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SE8a]
 gi|444870823|gb|ELX95295.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SE10]
 gi|444872699|gb|ELX97017.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 18569]
          Length = 577

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 331/569 (58%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (612), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|261867613|ref|YP_003255535.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            D11S-1]
 gi|415767194|ref|ZP_11483063.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            D17P-2]
 gi|261412945|gb|ACX82316.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            D11S-1]
 gi|348658650|gb|EGY76216.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            D17P-2]
          Length = 577

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 334/564 (59%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KA+  +  +D  Q  H +      +KAG + P+  +++   FG++LG+D K 
Sbjct: 321  AKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL++LLDE + R+   +  K+  T L+  E ++  +AV  G +KYADLS N
Sbjct: 380  FKTRSGDTVKLADLLDEAIERAGVLISQKS--TALSEQEKADVIEAVGIGSVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI   + I+  +++ A    P++L +EKE
Sbjct: 438  RITDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQISPGEVKQA----PLTLTNEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +     V  
Sbjct: 494  RALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEHCPILNNEDQ----QVKL 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T + +K+  D+L I+T
Sbjct: 550  SRLKLALLTERTLKQGLDLLGIKT 573



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 190/328 (57%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142 VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 201 DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261 YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E  KA+  +  +D R    + QA
Sbjct: 321 AKYRYETLKANRALVFSDTRQSQHMQQA 348



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 189/327 (57%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KA+  +  +D R    + Q
Sbjct: 321  AKYRYETLKANRALVFSDTRQSQHMQQ 347


>gi|123965451|ref|YP_001010532.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123199817|gb|ABM71425.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 602

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/580 (40%), Positives = 338/580 (58%), Gaps = 41/580 (7%)

Query: 507  NEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKI 566
            N+    +FGD+QCN  + L KI+K     +NP +IA         +L  N  ++ + + +
Sbjct: 38   NQASKEEFGDYQCNICLVLSKIYK-----RNPREIAIEFVQ----KLKENKEISNLCEAL 88

Query: 567  EVAKPGFVNVFLSRVYAGEQIKDIIV---NGVQPPTLNK--KLRVLVDFSSPNIAKEMHV 621
            E+A PGF+N+ L       +IK  I     GV     N   + +V+VDFSSPNIAKEMHV
Sbjct: 89   EIAGPGFINIKLKNNLLIAKIKSNIKCPRAGVPLSNNNSHSQKKVIVDFSSPNIAKEMHV 148

Query: 622  GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIA 679
            GHLRSTIIGD+I+++ E  G+ V+RLNHVGDWGTQFGMLI  L+D +   L +     I+
Sbjct: 149  GHLRSTIIGDSIAKIFELRGYTVLRLNHVGDWGTQFGMLITQLKDLYSSDLREIDKITIS 208

Query: 680  DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
            DL  FYK SKKRFD +  FKKR+ + VV LQ  D    KAW+++C+ SR++F +IY  LN
Sbjct: 209  DLVEFYKASKKRFDNETEFKKRSREEVVKLQSGDKKSIKAWKLLCNQSRKEFDEIYKILN 268

Query: 740  VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGG 794
            + + ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DGG
Sbjct: 269  IKIKERGESFYNPFLKSIIEDLTFKKILVEDQGAKCVFLHGMTNKEGNPLPLIIKKKDGG 328

Query: 795  FTYDTSDLAAIRQRIEEE----KADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMD 850
            F Y T+DLAA+R R  +E     A  I+YVTD GQ  HF  + + AK+A  + P    ++
Sbjct: 329  FNYATTDLAALRYRFRKEPHGDNATRIIYVTDHGQSNHFAGVFQVAKRANWI-PEDCEVN 387

Query: 851  FVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSE 906
             V FG+V G D KK KTR GD +KL +LL E ++R+    L +L+ ++R    T   +  
Sbjct: 388  HVPFGLVQGIDGKKLKTREGDIIKLKDLLSESIKRAKEDLLKRLEKESRFE--TEEFILN 445

Query: 907  AQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSE 966
              + +  G +KYADLS NR  +Y FSF+KML   GNTA YLLY   RI+ I R   +N +
Sbjct: 446  TSKVIGIGAVKYADLSQNRITNYQFSFEKMLSLNGNTAPYLLYTLVRISGINRKNNMNED 505

Query: 967  DLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYD 1026
                A  S  ++  H+ E+ L + LL+ ++V++ + +DL  + LC YL+++  +F+ FYD
Sbjct: 506  ----AVNSESIAYSHDLEWKLIRKLLKFDEVIVSIEKDLMPNRLCNYLFELCQSFNRFYD 561

Query: 1027 NCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
                ++ +   KI      RL L   T K +K   ++L I
Sbjct: 562  QVSILKVEMNTKI-----SRLTLCALTEKTLKLSLELLGI 596



 Score =  259 bits (661), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 147/333 (44%), Positives = 202/333 (60%), Gaps = 25/333 (7%)

Query: 117 NEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKI 176
           N+    +FGD+QCN  + L KI+K     +NP +IA         +L  N  ++ + + +
Sbjct: 38  NQASKEEFGDYQCNICLVLSKIYK-----RNPREIAIEFVQ----KLKENKEISNLCEAL 88

Query: 177 EVAKPGFVNVFLSRVYAGEQIKDIIV---NGVQPPTLNK--KLRVLVDFSSPNIAKEMHV 231
           E+A PGF+N+ L       +IK  I     GV     N   + +V+VDFSSPNIAKEMHV
Sbjct: 89  EIAGPGFINIKLKNNLLIAKIKSNIKCPRAGVPLSNNNSHSQKKVIVDFSSPNIAKEMHV 148

Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIA 289
           GHLRSTIIGD+I+++ E  G+ V+RLNHVGDWGTQFGMLI  L+D +   L +     I+
Sbjct: 149 GHLRSTIIGDSIAKIFELRGYTVLRLNHVGDWGTQFGMLITQLKDLYSSDLREIDKITIS 208

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DL  FYK SKKRFD +  FKKR+ + VV LQ  D    KAW+++C+ SR++F +IY  LN
Sbjct: 209 DLVEFYKASKKRFDNETEFKKRSREEVVKLQSGDKKSIKAWKLLCNQSRKEFDEIYKILN 268

Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGG 404
           + + ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DGG
Sbjct: 269 IKIKERGESFYNPFLKSIIEDLTFKKILVEDQGAKCVFLHGMTNKEGNPLPLIIKKKDGG 328

Query: 405 FTYDTSDLAAIRQRIEEE----KADWIVYVTDH 433
           F Y T+DLAA+R R  +E     A  I+YVTDH
Sbjct: 329 FNYATTDLAALRYRFRKEPHGDNATRIIYVTDH 361



 Score =  259 bits (661), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 147/333 (44%), Positives = 202/333 (60%), Gaps = 25/333 (7%)

Query: 1134 NEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKI 1193
            N+    +FGD+QCN  + L KI+K     +NP +IA         +L  N  ++ + + +
Sbjct: 38   NQASKEEFGDYQCNICLVLSKIYK-----RNPREIAIEFVQ----KLKENKEISNLCEAL 88

Query: 1194 EVAKPGFVNVFLSRVYAGEQIKDIIV---NGVQPPTLNK--KLRVLVDFSSPNIAKEMHV 1248
            E+A PGF+N+ L       +IK  I     GV     N   + +V+VDFSSPNIAKEMHV
Sbjct: 89   EIAGPGFINIKLKNNLLIAKIKSNIKCPRAGVPLSNNNSHSQKKVIVDFSSPNIAKEMHV 148

Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIA 1306
            GHLRSTIIGD+I+++ E  G+ V+RLNHVGDWGTQFGMLI  L+D +   L +     I+
Sbjct: 149  GHLRSTIIGDSIAKIFELRGYTVLRLNHVGDWGTQFGMLITQLKDLYSSDLREIDKITIS 208

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DL  FYK SKKRFD +  FKKR+ + VV LQ  D    KAW+++C+ SR++F +IY  LN
Sbjct: 209  DLVEFYKASKKRFDNETEFKKRSREEVVKLQSGDKKSIKAWKLLCNQSRKEFDEIYKILN 268

Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGG 1421
            + + ERGESFY   ++ ++  L  K +L  D G K      M  ++   +P+ I K DGG
Sbjct: 269  IKIKERGESFYNPFLKSIIEDLTFKKILVEDQGAKCVFLHGMTNKEGNPLPLIIKKKDGG 328

Query: 1422 FTYDTSDLAAIRQRIEEE----KADWIVYVTDH 1450
            F Y T+DLAA+R R  +E     A  I+YVTDH
Sbjct: 329  FNYATTDLAALRYRFRKEPHGDNATRIIYVTDH 361


>gi|290475235|ref|YP_003468121.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174554|emb|CBJ81348.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 576

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/602 (39%), Positives = 341/602 (56%), Gaps = 52/602 (8%)

Query: 484  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 543
            + +  +  A  E G  T S A   +    +FGD+Q N  MA  K          P  +A+
Sbjct: 6    ILSEKISNALIEAGAPTDSEAHVRQSAKAQFGDYQANGVMAAAKKVG-----MPPRQLAE 60

Query: 544  SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQP 597
             + S +         L  +  KIE+A PGF+N+FL + +    I+  +      +  V+P
Sbjct: 61   KVISQL--------DLQGIASKIEIAGPGFINIFLDKAWIAANIETALKDEKLGITPVEP 112

Query: 598  PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
             T      +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVGDWGTQF
Sbjct: 113  QT------IVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVGDWGTQF 166

Query: 658  GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            GMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE F  RA   VV LQ  D   +
Sbjct: 167  GMLIAYLE-KIQNEDANDMALADLEAFYREAKKHYDEDEEFAIRARNYVVKLQGGDEYCR 225

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRK 774
            + W  + D++    Q+ Y+RLNVTLTE+   GES Y   +  +V  L+++G+    DG  
Sbjct: 226  EMWRKLVDITMSQNQQTYNRLNVTLTEKDVMGESLYNDMLPGIVADLKQRGIAVKSDGAT 285

Query: 775  IMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            +++        GE  G I   I K DGG+ Y T+D+A  + R E   A  ++Y TD  Q 
Sbjct: 286  VVYLDEFKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHETLNASRVLYYTDSRQH 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H        +K G + P    ++   FG++LG+D K FKTR+G TV+LS+LLDE + R+
Sbjct: 343  QHLMQAWAIIRKTGYI-PASMLLEHHMFGMMLGKDGKPFKTRAGGTVRLSDLLDEAIERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               +++KN   ++   EL +  +AV  G +KYADLS +R  DYVF +D ML   GNTA Y
Sbjct: 402  DTLIREKN--PDMPEDELKKIVEAVGIGAVKYADLSKSRTTDYVFDWDNMLAFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTR++SI + A I+  +L     + PV L  E+E ALA  LL+  + +  V R+  
Sbjct: 460  MQYAYTRVSSIFKRADIDENNL-----TLPVMLNEEREQALATRLLQFEETITTVAREGT 514

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H +C YLYD++  FS FY++C  +  D+E     +   RL LA  TAK +K+  D L I
Sbjct: 515  PHVMCAYLYDLAGLFSGFYEHCPILNADSE----ELRQSRLKLALLTAKTLKQGLDTLGI 570

Query: 1067 RT 1068
            +T
Sbjct: 571  QT 572



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/379 (37%), Positives = 209/379 (55%), Gaps = 40/379 (10%)

Query: 94  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 153
           + +  +  A  E G  T S A   +    +FGD+Q N  MA  K          P  +A+
Sbjct: 6   ILSEKISNALIEAGAPTDSEAHVRQSAKAQFGDYQANGVMAAAKKVG-----MPPRQLAE 60

Query: 154 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQP 207
            + S +         L  +  KIE+A PGF+N+FL + +    I+  +      +  V+P
Sbjct: 61  KVISQL--------DLQGIASKIEIAGPGFINIFLDKAWIAANIETALKDEKLGITPVEP 112

Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
            T      +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVGDWGTQF
Sbjct: 113 QT------IVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVGDWGTQF 166

Query: 268 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           GMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE F  RA   VV LQ  D   +
Sbjct: 167 GMLIAYLE-KIQNEDANDMALADLEAFYREAKKHYDEDEEFAIRARNYVVKLQGGDEYCR 225

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRK 384
           + W  + D++    Q+ Y+RLNVTLTE+   GES Y   +  +V  L+++G+    DG  
Sbjct: 226 EMWRKLVDITMSQNQQTYNRLNVTLTEKDVMGESLYNDMLPGIVADLKQRGIAVKSDGAT 285

Query: 385 IMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           +++        GE  G I   I K DGG+ Y T+D+A  + R E   A  ++Y TD R +
Sbjct: 286 VVYLDEFKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHETLNASRVLYYTDSRQH 342

Query: 437 HQVLQAIAEEEKKQGISSS 455
             ++QA A   K   I +S
Sbjct: 343 QHLMQAWAIIRKTGYIPAS 361



 Score =  242 bits (618), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/365 (38%), Positives = 203/365 (55%), Gaps = 40/365 (10%)

Query: 1111 VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 1170
            + +  +  A  E G  T S A   +    +FGD+Q N  MA  K          P  +A+
Sbjct: 6    ILSEKISNALIEAGAPTDSEAHVRQSAKAQFGDYQANGVMAAAKKVG-----MPPRQLAE 60

Query: 1171 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQP 1224
             + S +         L  +  KIE+A PGF+N+FL + +    I+  +      +  V+P
Sbjct: 61   KVISQL--------DLQGIASKIEIAGPGFINIFLDKAWIAANIETALKDEKLGITPVEP 112

Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
             T      +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVGDWGTQF
Sbjct: 113  QT------IVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVGDWGTQF 166

Query: 1285 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            GMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE F  RA   VV LQ  D   +
Sbjct: 167  GMLIAYLE-KIQNEDANDMALADLEAFYREAKKHYDEDEEFAIRARNYVVKLQGGDEYCR 225

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
            + W  + D++    Q+ Y+RLNVTLTE+   GES Y   +  +V  L+++G+    DG  
Sbjct: 226  EMWRKLVDITMSQNQQTYNRLNVTLTEKDVMGESLYNDMLPGIVADLKQRGIAVKSDGAT 285

Query: 1402 IMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            +++        GE  G I   I K DGG+ Y T+D+A  + R E   A  ++Y TD R +
Sbjct: 286  VVYLDEFKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHETLNASRVLYYTDSRQH 342

Query: 1454 HQVLQ 1458
              ++Q
Sbjct: 343  QHLMQ 347


>gi|386308151|ref|YP_006004207.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
            Y11]
 gi|418243017|ref|ZP_12869513.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
            PhRBD_Ye1]
 gi|433549804|ref|ZP_20505848.1| Arginyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
 gi|318605975|emb|CBY27473.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
            Y11]
 gi|351777497|gb|EHB19705.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
            PhRBD_Ye1]
 gi|431788939|emb|CCO68888.1| Arginyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
          Length = 576

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 348/608 (57%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIARKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAIERAGKLIAEKN--PDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ S+ + AG++  +L +     P+ +  ++E ALA  LL+  +V+  
Sbjct: 454  GNTAPYMQYAYTRVVSVFKRAGVDESNLIL-----PLVITEDREAALATRLLQFEEVITT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  D+E   ++    RL LA  TAK +K+ 
Sbjct: 509  VAREGIPHVMCSYLYDLAGLFSSFYEHCQILNADSEESRQS----RLKLAMLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             D L I+T
Sbjct: 565  LDTLGIQT 572



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/372 (37%), Positives = 209/372 (56%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53  -MQPRQLAEKVIELL--------DLDGIARKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104 KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220 GDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280 ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/371 (37%), Positives = 208/371 (56%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   ++++ +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIARKVEIAGPGFINIFLDRQWVASKVEEALKAP 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GVQP    +   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVMGESLYNTMLPEIVADLKAKGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|418513307|ref|ZP_13079538.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Pomona str. ATCC 10729]
 gi|366082204|gb|EHN46141.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Pomona str. ATCC 10729]
          Length = 577

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|423140420|ref|ZP_17128058.1| arginyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
            ATCC BAA-1581]
 gi|379052974|gb|EHY70865.1| arginyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
            ATCC BAA-1581]
          Length = 577

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSSIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSSIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSSIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|205352385|ref|YP_002226186.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Gallinarum str. 287/91]
 gi|375123187|ref|ZP_09768351.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Gallinarum str. SG9]
 gi|378955472|ref|YP_005212959.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Gallinarum/pullorum str. RKS5078]
 gi|438133157|ref|ZP_20873950.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Pullorum str. ATCC 9120]
 gi|445137936|ref|ZP_21383789.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Gallinarum str. 9184]
 gi|238690484|sp|B5R8C8.1|SYR_SALG2 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|205272166|emb|CAR37024.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Gallinarum str. 287/91]
 gi|326627437|gb|EGE33780.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Gallinarum str. SG9]
 gi|357206083|gb|AET54129.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Gallinarum/pullorum str. RKS5078]
 gi|434941101|gb|ELL47599.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Pullorum str. ATCC 9120]
 gi|444843851|gb|ELX69098.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Gallinarum str. 9184]
          Length = 577

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 331/569 (58%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLSEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLSEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLSEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|437706447|ref|ZP_20825376.1| arginyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
            serovar Enteritidis str. 543463 42-20]
 gi|435291653|gb|ELO68463.1| arginyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
            serovar Enteritidis str. 543463 42-20]
          Length = 559

 Score =  399 bits (1024), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 331/569 (58%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 17   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 63

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 64   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 120

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 121  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 179

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 180  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 239

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 240  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 299

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 300  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 358

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 359  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 416

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 417  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 472

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 473  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 528

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 529  --VRNSRLKLAQLTAKTLKLGLDTLGIET 555



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 17  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 63

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 64  FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 120

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 121 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 179

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 180 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 239

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 240 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 299

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 300 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 330



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 17   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 63

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 64   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 120

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 121  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 179

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 180  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 239

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 240  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 299

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 300  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 329


>gi|110805849|ref|YP_689369.1| arginyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|123146957|sp|Q0T3Q1.1|SYR_SHIF8 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|110615397|gb|ABF04064.1| arginine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 577

 Score =  399 bits (1024), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 233/570 (40%), Positives = 326/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GDT  R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN +  +   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPY--MPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 194/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GDT  R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  237 bits (605), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 192/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GDT  R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|24113254|ref|NP_707764.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30063324|ref|NP_837495.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|384543531|ref|YP_005727594.1| arginyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|415854901|ref|ZP_11530440.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|417723459|ref|ZP_12372272.1| arginyl-tRNA synthetase [Shigella flexneri K-304]
 gi|417728667|ref|ZP_12377376.1| arginyl-tRNA synthetase [Shigella flexneri K-671]
 gi|417733811|ref|ZP_12382466.1| arginyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|417743620|ref|ZP_12392152.1| arginyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|420342085|ref|ZP_14843574.1| arginyl-tRNA synthetase [Shigella flexneri K-404]
 gi|39932172|sp|Q83KQ3.1|SYR_SHIFL RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|24052255|gb|AAN43471.1| arginine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30041576|gb|AAP17304.1| arginine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|281601317|gb|ADA74301.1| Arginyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313650080|gb|EFS14493.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|332757309|gb|EGJ87646.1| arginyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332757427|gb|EGJ87762.1| arginyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332766600|gb|EGJ96804.1| arginyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333017694|gb|EGK37006.1| arginyl-tRNA synthetase [Shigella flexneri K-304]
 gi|391267950|gb|EIQ26880.1| arginyl-tRNA synthetase [Shigella flexneri K-404]
          Length = 577

 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 233/570 (40%), Positives = 326/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GDT  R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDVFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 194/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GDT  R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDVFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 192/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GDT  R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDVFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417702488|ref|ZP_12351605.1| arginyl-tRNA synthetase [Shigella flexneri K-218]
 gi|417738790|ref|ZP_12387374.1| arginyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|418256447|ref|ZP_12880418.1| arginyl-tRNA synthetase [Shigella flexneri 6603-63]
 gi|420372755|ref|ZP_14872963.1| arginyl-tRNA synthetase [Shigella flexneri 1235-66]
 gi|332756015|gb|EGJ86368.1| arginyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|333003263|gb|EGK22809.1| arginyl-tRNA synthetase [Shigella flexneri K-218]
 gi|391317932|gb|EIQ75172.1| arginyl-tRNA synthetase [Shigella flexneri 1235-66]
 gi|397897891|gb|EJL14289.1| arginyl-tRNA synthetase [Shigella flexneri 6603-63]
          Length = 577

 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 233/570 (40%), Positives = 326/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GDT  R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 194/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GDT  R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 192/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GDT  R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417538714|ref|ZP_12191218.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Wandsworth str. A4-580]
 gi|353665921|gb|EHD03895.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Wandsworth str. A4-580]
          Length = 559

 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 331/569 (58%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 17   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 63

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 64   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 120

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 121  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 179

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 180  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 239

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 240  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 299

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 300  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 358

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 359  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 416

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 417  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 472

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 473  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 528

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 529  --VRNSRLKLAQLTAKTLKLGLDTLGIET 555



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 17  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 63

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 64  FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 120

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 121 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 179

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 180 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 239

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 240 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 299

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 300 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 330



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 17   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 63

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 64   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 120

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 121  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 179

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 180  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 239

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 240  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 299

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 300  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 329


>gi|16765251|ref|NP_460866.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. LT2]
 gi|167994213|ref|ZP_02575305.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            4,[5],12:i:- str. CVM23701]
 gi|374980932|ref|ZP_09722262.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. TN061786]
 gi|378445300|ref|YP_005232932.1| ArgRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
            D23580]
 gi|378450516|ref|YP_005237875.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. 14028S]
 gi|378699781|ref|YP_005181738.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. SL1344]
 gi|378984475|ref|YP_005247630.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. T000240]
 gi|378989255|ref|YP_005252419.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. UK-1]
 gi|379701094|ref|YP_005242822.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. ST4/74]
 gi|383496588|ref|YP_005397277.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. 798]
 gi|422026106|ref|ZP_16372515.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm1]
 gi|422031136|ref|ZP_16377315.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm2]
 gi|427550368|ref|ZP_18927822.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm8]
 gi|427566454|ref|ZP_18932537.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm9]
 gi|427586550|ref|ZP_18937326.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm3]
 gi|427609903|ref|ZP_18942191.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm4]
 gi|427633761|ref|ZP_18947086.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm6]
 gi|427656149|ref|ZP_18951851.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm10]
 gi|427661296|ref|ZP_18956763.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm11]
 gi|427668928|ref|ZP_18961564.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm12]
 gi|427767310|ref|ZP_18966738.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm5]
 gi|325530298|sp|E1WGF0.1|SYR_SALTS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|325530299|sp|P0CL51.1|SYR_SALTY RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|16420446|gb|AAL20825.1| arginine tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. LT2]
 gi|205327860|gb|EDZ14624.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            4,[5],12:i:- str. CVM23701]
 gi|261247079|emb|CBG24900.1| ArgRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
            D23580]
 gi|267993894|gb|ACY88779.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. 14028S]
 gi|301158429|emb|CBW17938.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. SL1344]
 gi|312912903|dbj|BAJ36877.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. T000240]
 gi|321224552|gb|EFX49615.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. TN061786]
 gi|323130193|gb|ADX17623.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. ST4/74]
 gi|332988802|gb|AEF07785.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. UK-1]
 gi|380463409|gb|AFD58812.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. 798]
 gi|414018397|gb|EKT02050.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm1]
 gi|414019073|gb|EKT02698.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm8]
 gi|414021100|gb|EKT04663.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm2]
 gi|414032691|gb|EKT15684.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm9]
 gi|414034566|gb|EKT17492.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm3]
 gi|414037625|gb|EKT20387.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm4]
 gi|414047490|gb|EKT29768.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm10]
 gi|414048983|gb|EKT31210.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm6]
 gi|414053464|gb|EKT35460.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm11]
 gi|414059695|gb|EKT41252.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm12]
 gi|414065225|gb|EKT46000.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Typhimurium str. STm5]
          Length = 577

 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|62180486|ref|YP_216903.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Choleraesuis str. SC-B67]
 gi|168241540|ref|ZP_02666472.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. SL486]
 gi|194449121|ref|YP_002045963.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. SL476]
 gi|375114816|ref|ZP_09759986.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Choleraesuis str. SCSA50]
 gi|386591746|ref|YP_006088146.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. B182]
 gi|419730429|ref|ZP_14257375.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41579]
 gi|419732114|ref|ZP_14259020.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41563]
 gi|419738286|ref|ZP_14265051.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41573]
 gi|419742322|ref|ZP_14268996.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41566]
 gi|419747458|ref|ZP_14273978.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41565]
 gi|421570966|ref|ZP_16016649.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. CFSAN00322]
 gi|421574696|ref|ZP_16020317.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. CFSAN00325]
 gi|421579697|ref|ZP_16025259.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. CFSAN00326]
 gi|421586004|ref|ZP_16031491.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. CFSAN00328]
 gi|75482759|sp|Q57N89.1|SYR_SALCH RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|238693639|sp|B4T808.1|SYR_SALHS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|62128119|gb|AAX65822.1| arginine tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Choleraesuis str. SC-B67]
 gi|194407425|gb|ACF67644.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. SL476]
 gi|205339146|gb|EDZ25910.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. SL486]
 gi|322714962|gb|EFZ06533.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Choleraesuis str. SCSA50]
 gi|381294437|gb|EIC35576.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41579]
 gi|381302654|gb|EIC43686.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41573]
 gi|381302963|gb|EIC43992.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41563]
 gi|381314193|gb|EIC54967.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41566]
 gi|381318612|gb|EIC59332.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. 41565]
 gi|383798790|gb|AFH45872.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. B182]
 gi|402521172|gb|EJW28510.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. CFSAN00326]
 gi|402522601|gb|EJW29923.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. CFSAN00322]
 gi|402524896|gb|EJW32193.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. CFSAN00325]
 gi|402529130|gb|EJW36374.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Heidelberg str. CFSAN00328]
          Length = 577

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (612), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|366157433|ref|ZP_09457295.1| arginyl-tRNA synthetase [Escherichia sp. TW09308]
          Length = 577

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 327/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL  V+  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPVFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN + L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEDQLAAA----PVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 195/336 (58%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL  V+  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPVFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 193/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL  V+  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPVFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417168000|ref|ZP_12000622.1| arginine--tRNA ligase [Escherichia coli 99.0741]
 gi|386171026|gb|EIH43074.1| arginine--tRNA ligase [Escherichia coli 99.0741]
          Length = 577

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPANELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQ 347


>gi|418844987|ref|ZP_13399773.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19443]
 gi|418859040|ref|ZP_13413649.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19470]
 gi|418863490|ref|ZP_13418028.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19536]
 gi|392813796|gb|EJA69760.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19443]
 gi|392831279|gb|EJA86913.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19470]
 gi|392833358|gb|EJA88973.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19536]
          Length = 577

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|215487089|ref|YP_002329520.1| arginyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|254782961|sp|B7USQ3.1|SYR_ECO27 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|215265161|emb|CAS09549.1| arginyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
          Length = 577

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 326/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGASVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGASVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGASVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417348444|ref|ZP_12127391.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Gaminara str. A4-567]
 gi|353575592|gb|EHC38291.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Gaminara str. A4-567]
          Length = 558

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 16   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 62

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 63   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 119

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 120  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 178

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 179  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 238

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 239  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 298

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 299  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 357

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 358  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 415

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 416  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 471

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 472  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 527

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 528  --VRNSRLKLAQLTAKTLKLGLDTLGIET 554



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 16  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 62

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 63  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 119

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 120 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 178

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 179 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 238

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 239 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 298

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 299 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 329



 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 16   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 62

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 63   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 119

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 120  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 178

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 179  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 238

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 239  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 298

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 299  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 328


>gi|417414839|ref|ZP_12158652.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Mississippi str. A4-633]
 gi|417457488|ref|ZP_12163829.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Montevideo str. S5-403]
 gi|353624464|gb|EHC73497.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Mississippi str. A4-633]
 gi|353633833|gb|EHC80547.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Montevideo str. S5-403]
          Length = 558

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 16   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 62

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 63   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 119

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 120  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 178

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 179  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 238

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 239  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 298

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 299  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 357

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 358  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 415

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 416  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 471

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 472  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 527

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 528  --VRNSRLKLAQLTAKTLKLGLDTLGIET 554



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 16  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 62

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 63  FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 119

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 120 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 178

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 179 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 238

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 239 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 298

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 299 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 329



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 16   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 62

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 63   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 119

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 120  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 178

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 179  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 238

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 239  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 298

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 299  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 328


>gi|168820735|ref|ZP_02832735.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Weltevreden str. HI_N05-537]
 gi|197248879|ref|YP_002146112.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Agona str. SL483]
 gi|238912513|ref|ZP_04656350.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Tennessee str. CDC07-0191]
 gi|409249644|ref|YP_006885466.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Weltevreden str. 2007-60-3289-1]
 gi|416421671|ref|ZP_11689669.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 315996572]
 gi|416433745|ref|ZP_11697168.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 495297-1]
 gi|416436566|ref|ZP_11698368.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 495297-3]
 gi|416449028|ref|ZP_11706679.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 495297-4]
 gi|416452347|ref|ZP_11708898.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 515920-1]
 gi|416456516|ref|ZP_11711520.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 515920-2]
 gi|416469395|ref|ZP_11718507.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 531954]
 gi|416477786|ref|ZP_11721582.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. NC_MB110209-0054]
 gi|416491044|ref|ZP_11726936.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. OH_2009072675]
 gi|416498178|ref|ZP_11730104.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CASC_09SCPH15965]
 gi|416504822|ref|ZP_11733404.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. SARB31]
 gi|416512323|ref|ZP_11737712.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. ATCC BAA710]
 gi|416527964|ref|ZP_11743612.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. LQC 10]
 gi|416535136|ref|ZP_11747500.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. SARB30]
 gi|416542612|ref|ZP_11751678.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 19N]
 gi|416550557|ref|ZP_11756049.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 29N]
 gi|416562464|ref|ZP_11762164.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 42N]
 gi|416570713|ref|ZP_11766208.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 4441 H]
 gi|416579315|ref|ZP_11771173.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 81038-01]
 gi|416585186|ref|ZP_11774739.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MD_MDA09249507]
 gi|416589928|ref|ZP_11777444.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 414877]
 gi|416601244|ref|ZP_11784908.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 366867]
 gi|416604346|ref|ZP_11786106.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 413180]
 gi|416612021|ref|ZP_11791200.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 446600]
 gi|416619512|ref|ZP_11795174.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 609458-1]
 gi|416629488|ref|ZP_11800152.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 556150-1]
 gi|416638792|ref|ZP_11804160.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 609460]
 gi|416651728|ref|ZP_11811245.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 507440-20]
 gi|416660917|ref|ZP_11815302.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 556152]
 gi|416666437|ref|ZP_11817511.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MB101509-0077]
 gi|416677014|ref|ZP_11822118.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MB102109-0047]
 gi|416699346|ref|ZP_11828622.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MB110209-0055]
 gi|416705025|ref|ZP_11830637.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MB111609-0052]
 gi|416711013|ref|ZP_11834971.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 2009083312]
 gi|416716881|ref|ZP_11839173.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 2009085258]
 gi|416722016|ref|ZP_11843075.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 315731156]
 gi|416727500|ref|ZP_11847095.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2009159199]
 gi|416737401|ref|ZP_11852633.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008282]
 gi|416758754|ref|ZP_11863852.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008284]
 gi|416762314|ref|ZP_11866310.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008285]
 gi|416771682|ref|ZP_11872917.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008287]
 gi|418484068|ref|ZP_13053072.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 80959-06]
 gi|418493751|ref|ZP_13060213.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CT_02035318]
 gi|418497586|ref|ZP_13064003.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CT_02035320]
 gi|418502319|ref|ZP_13068691.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CT_02035321]
 gi|418509523|ref|ZP_13075817.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CT_02035327]
 gi|418527742|ref|ZP_13093698.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008286]
 gi|440764845|ref|ZP_20943869.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Agona str. SH11G1113]
 gi|440768264|ref|ZP_20947237.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Agona str. SH08SF124]
 gi|440774713|ref|ZP_20953600.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Agona str. SH10GFN094]
 gi|238690037|sp|B5F3I0.1|SYR_SALA4 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|197212582|gb|ACH49979.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Agona str. SL483]
 gi|205342662|gb|EDZ29426.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Weltevreden str. HI_N05-537]
 gi|320085472|emb|CBY95253.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Weltevreden str. 2007-60-3289-1]
 gi|322616909|gb|EFY13817.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 315996572]
 gi|322618147|gb|EFY15039.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 495297-1]
 gi|322625818|gb|EFY22637.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 495297-3]
 gi|322626270|gb|EFY23080.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 495297-4]
 gi|322632684|gb|EFY29429.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 515920-1]
 gi|322639028|gb|EFY35721.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 515920-2]
 gi|322640468|gb|EFY37121.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 531954]
 gi|322646023|gb|EFY42540.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. NC_MB110209-0054]
 gi|322649555|gb|EFY45987.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. OH_2009072675]
 gi|322655463|gb|EFY51771.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CASC_09SCPH15965]
 gi|322660242|gb|EFY56480.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 19N]
 gi|322662923|gb|EFY59130.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 81038-01]
 gi|322668108|gb|EFY64267.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MD_MDA09249507]
 gi|322674132|gb|EFY70226.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 414877]
 gi|322675514|gb|EFY71588.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 366867]
 gi|322683072|gb|EFY79088.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 413180]
 gi|322686766|gb|EFY82744.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 446600]
 gi|323195343|gb|EFZ80523.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 609458-1]
 gi|323199235|gb|EFZ84330.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 556150-1]
 gi|323204040|gb|EFZ89055.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 609460]
 gi|323210677|gb|EFZ95555.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 556152]
 gi|323217475|gb|EGA02194.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MB101509-0077]
 gi|323221966|gb|EGA06356.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MB102109-0047]
 gi|323224424|gb|EGA08712.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MB110209-0055]
 gi|323231497|gb|EGA15610.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. MB111609-0052]
 gi|323235939|gb|EGA20018.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 2009083312]
 gi|323240509|gb|EGA24552.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 2009085258]
 gi|323245401|gb|EGA29401.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 315731156]
 gi|323250172|gb|EGA34064.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2009159199]
 gi|323253620|gb|EGA37448.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008282]
 gi|323260282|gb|EGA43903.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008284]
 gi|323266873|gb|EGA50359.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008285]
 gi|323269079|gb|EGA52535.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008287]
 gi|363554721|gb|EHL38955.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. LQC 10]
 gi|363557270|gb|EHL41477.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. SARB31]
 gi|363566278|gb|EHL50295.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. SARB30]
 gi|363568340|gb|EHL52323.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 29N]
 gi|363569835|gb|EHL53784.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. ATCC BAA710]
 gi|363572795|gb|EHL56683.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 42N]
 gi|363575166|gb|EHL59024.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 4441 H]
 gi|366059853|gb|EHN24120.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 80959-06]
 gi|366063896|gb|EHN28107.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CT_02035318]
 gi|366075343|gb|EHN39400.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CT_02035320]
 gi|366075675|gb|EHN39727.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CT_02035321]
 gi|366078230|gb|EHN42235.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. CT_02035327]
 gi|366827475|gb|EHN54381.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. 507440-20]
 gi|372204370|gb|EHP17898.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008286]
 gi|436412936|gb|ELP10874.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Agona str. SH10GFN094]
 gi|436415528|gb|ELP13447.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Agona str. SH11G1113]
 gi|436418144|gb|ELP16030.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Agona str. SH08SF124]
          Length = 577

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|194443417|ref|YP_002041175.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. SL254]
 gi|418789544|ref|ZP_13345331.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19447]
 gi|418796941|ref|ZP_13352632.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19567]
 gi|418809462|ref|ZP_13365014.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21550]
 gi|418813615|ref|ZP_13369136.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 22513]
 gi|418814882|ref|ZP_13370390.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21538]
 gi|418822669|ref|ZP_13378080.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 22425]
 gi|418833666|ref|ZP_13388585.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM N18486]
 gi|418836664|ref|ZP_13391548.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM N1543]
 gi|418840563|ref|ZP_13395392.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21554]
 gi|418850597|ref|ZP_13405313.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 37978]
 gi|418853897|ref|ZP_13408582.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19593]
 gi|418868150|ref|ZP_13422593.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 4176]
 gi|421884134|ref|ZP_16315350.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Senftenberg str. SS209]
 gi|238693529|sp|B4SVG0.1|SYR_SALNS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|194402080|gb|ACF62302.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. SL254]
 gi|379986215|emb|CCF87623.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Senftenberg str. SS209]
 gi|392760785|gb|EJA17620.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19447]
 gi|392770314|gb|EJA27042.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19567]
 gi|392773547|gb|EJA30243.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21550]
 gi|392774841|gb|EJA31536.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 22513]
 gi|392786926|gb|EJA43474.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 22425]
 gi|392793261|gb|EJA49705.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21538]
 gi|392795086|gb|EJA51469.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM N18486]
 gi|392801025|gb|EJA57255.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM N1543]
 gi|392811053|gb|EJA67065.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 21554]
 gi|392818447|gb|EJA74331.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 37978]
 gi|392826037|gb|EJA81771.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19593]
 gi|392838056|gb|EJA93620.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 4176]
          Length = 577

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|238783286|ref|ZP_04627311.1| Arginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715879|gb|EEQ07866.1| Arginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 576

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 236/611 (38%), Positives = 341/611 (55%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 588
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   +++      
Sbjct: 53   -MQPRQLAEKVIELL--------DLEGIASKVEIAGPGFINIFLDRQWVASKVEFALTAP 103

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHHVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESASDMDLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT     GES Y   +  +V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTTDDVMGESLYNAMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESDGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 334  LYYIDTRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAIERAGKLIAEKN--PDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ + AG++   L     + P+ +  ++E ALA  LL+  +V
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFKRAGVDENSL-----TLPLVITEDREAALATRLLQFEEV 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +   +E     +   RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDVAGLFSSFYEHCQILNAASE----EIRQSRLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L IRT
Sbjct: 562  KQGLDTLGIRT 572



 Score =  237 bits (605), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 205/375 (54%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 198
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   +++      
Sbjct: 53  -MQPRQLAEKVIELL--------DLEGIASKVEIAGPGFINIFLDRQWVASKVEFALTAP 103

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH V+R N
Sbjct: 104 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHHVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESASDMDLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT     GES Y   +  +V  L+ KG
Sbjct: 217 LQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTTDDVMGESLYNAMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESDGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDTRQHQHLMQA 348



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 204/374 (54%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 1215
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL R +   +++      
Sbjct: 53   -MQPRQLAEKVIELL--------DLEGIASKVEIAGPGFINIFLDRQWVASKVEFALTAP 103

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHHVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNESASDMDLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT     GES Y   +  +V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTTDDVMGESLYNAMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESDGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDTRQHQHLMQ 347


>gi|417473864|ref|ZP_12169152.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Rubislaw str. A4-653]
 gi|353649657|gb|EHC92232.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Rubislaw str. A4-653]
          Length = 558

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 16   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 62

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 63   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 119

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 120  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 178

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 179  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 238

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 239  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 298

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 299  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 357

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 358  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 415

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 416  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 471

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 472  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 527

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 528  --VRNSRLKLAQLTAKTLKLGLDTLGIET 554



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 16  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 62

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 63  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 119

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 120 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 178

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 179 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 238

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 239 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 298

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 299 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 329



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 16   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 62

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 63   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 119

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 120  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 178

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 179  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 238

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 239  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 298

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 299  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 328


>gi|16760859|ref|NP_456476.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. CT18]
 gi|29141449|ref|NP_804791.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. Ty2]
 gi|378959125|ref|YP_005216611.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. P-stx-12]
 gi|21542251|sp|Q8Z5V7.1|SYR_SALTI RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|25293290|pir||AI0744 arginine-tRNA ligase (EC 6.1.1.19) - Salmonella enterica subsp.
            enterica serovar Typhi (strain CT18)
 gi|16503156|emb|CAD05660.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi]
 gi|29137076|gb|AAO68640.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. Ty2]
 gi|374352997|gb|AEZ44758.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. P-stx-12]
          Length = 577

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDETFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRTGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDETFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDETFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417372745|ref|ZP_12142961.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Inverness str. R8-3668]
 gi|353604456|gb|EHC59237.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Inverness str. R8-3668]
          Length = 559

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 17   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 63

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 64   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 120

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 121  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 179

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 180  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 239

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 240  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 299

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 300  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 358

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 359  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 416

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 417  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 472

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 473  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 528

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 529  --VRNSRLKLAQLTAKTLKLGLDTLGIET 555



 Score =  241 bits (615), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 17  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 63

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 64  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 120

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 121 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 179

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 180 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 239

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 240 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 299

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 300 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 330



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 17   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 63

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 64   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 120

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 121  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 179

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 180  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 239

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 240  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 299

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 300  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 329


>gi|168238541|ref|ZP_02663599.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Schwarzengrund str. SL480]
 gi|194737429|ref|YP_002114945.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Schwarzengrund str. CVM19633]
 gi|437837283|ref|ZP_20845718.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SARB17]
 gi|238689771|sp|B4TYT3.1|SYR_SALSV RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|194712931|gb|ACF92152.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Schwarzengrund str. CVM19633]
 gi|197288679|gb|EDY28054.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Schwarzengrund str. SL480]
 gi|435299181|gb|ELO75349.1| arginyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. SARB17]
          Length = 577

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417325718|ref|ZP_12111608.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Adelaide str. A4-669]
 gi|353575227|gb|EHC38022.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Adelaide str. A4-669]
          Length = 567

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 25   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 71

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 72   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 128

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 129  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 187

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 188  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 247

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 248  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 307

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 308  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 366

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 367  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 424

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 425  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 480

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 481  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 536

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 537  --VRNSRLKLAQLTAKTLKLGLDTLGIET 563



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 25  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 71

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 72  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 128

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 129 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 187

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 188 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 247

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 248 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 307

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 308 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 338



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 25   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 71

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 72   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 128

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 129  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 187

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 188  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 247

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 248  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 307

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 308  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 337


>gi|365967404|ref|YP_004948966.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            ANH9381]
 gi|416076163|ref|ZP_11585291.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype b str. SCC1398]
 gi|348005306|gb|EGY45793.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype b str. SCC1398]
 gi|365746317|gb|AEW77222.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            ANH9381]
          Length = 577

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 333/564 (59%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KA+  +  +D  Q  H +      +KAG + P+  +++   FG++LG+D K 
Sbjct: 321  AKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL++LLDE + R+   +  K+  T L+  E ++  +AV  G +KYADLS N
Sbjct: 380  FKTRSGDTVKLADLLDEAIERAGVLISQKS--TALSEQEKADVIEAVGIGSVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI   + I+   ++ A    P++L +EKE
Sbjct: 438  RITDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQISPGKVKQA----PLTLTNEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +     V  
Sbjct: 494  RALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEHCPILNNEDQ----QVKL 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T + +K+  D+L I+T
Sbjct: 550  SRLKLALLTERTLKQGLDLLGIKT 573



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 190/328 (57%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142 VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 201 DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261 YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E  KA+  +  +D R    + QA
Sbjct: 321 AKYRYETLKANRALVFSDTRQSQHMQQA 348



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 189/327 (57%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KA+  +  +D R    + Q
Sbjct: 321  AKYRYETLKANRALVFSDTRQSQHMQQ 347


>gi|56413172|ref|YP_150247.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Paratyphi A str. ATCC 9150]
 gi|197362098|ref|YP_002141735.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Paratyphi A str. AKU_12601]
 gi|213163291|ref|ZP_03349001.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. E00-7866]
 gi|213426390|ref|ZP_03359140.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. E02-1180]
 gi|81361941|sp|Q5PMZ2.1|SYR_SALPA RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|238690743|sp|B5BH46.1|SYR_SALPK RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|56127429|gb|AAV76935.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Paratyphi A str. ATCC 9150]
 gi|197093575|emb|CAR59038.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Paratyphi A str. AKU_12601]
          Length = 577

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRTGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (615), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|168234027|ref|ZP_02659085.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Kentucky str. CDC 191]
 gi|194468774|ref|ZP_03074758.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Kentucky str. CVM29188]
 gi|194455138|gb|EDX43977.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Kentucky str. CVM29188]
 gi|205331975|gb|EDZ18739.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Kentucky str. CDC 191]
          Length = 577

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 328/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F  RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAARARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN    +   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PNMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 194/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F  RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAARARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 193/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F  RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAARARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|261491990|ref|ZP_05988566.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
            BOVINE]
 gi|261495282|ref|ZP_05991734.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309047|gb|EEY10298.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312361|gb|EEY13488.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
            BOVINE]
          Length = 575

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/570 (41%), Positives = 336/570 (58%), Gaps = 47/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILE--------NADLNGIADKLEIAGPG 81

Query: 573  FVNVFLSRVYAGE------QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL+  +  E      Q  +  +    P T      +++D+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLNPEWLAENTNSSLQAVNFGIKTANPQT------IVIDYSSPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD + R L +LG++V+R NHVGDWGTQFGMLIA+L+    +++++   ++DL+AFY+
Sbjct: 136  TIIGDAVVRTLAFLGNNVIRANHVGDWGTQFGMLIAYLEKMENEHVSEM-ELSDLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
             +K+ +D DE F ++A   VV LQ  D      W+ + D++    Q+ Y+RLNVTLTE+ 
Sbjct: 195  AAKEHYDSDEAFAEKARNYVVKLQSSDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKD 254

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   + ++V  L+ KGL   DDG  +++ +   ++   PM ++  K DGGF Y 
Sbjct: 255  VMGESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+AA + R E  KAD  +  +D  Q  H +      +KAG + P+   ++   FG++L
Sbjct: 315  TTDIAAAKYRYETLKADRALVFSDSRQAQHMQQAWLITRKAGYV-PDSFSLEHPFFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTRSG TVKL +LLDE + R+ DKL  + R TELT  E +   +AVA G +KY
Sbjct: 374  GKDGKPFKTRSGGTVKLKDLLDEAVERA-DKLIAE-RSTELTAEEKAAVVEAVAIGSVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            +DLS NR  DYVF +D ML   GNTA Y+ YAYTRI SI   A I+ + L     S  + 
Sbjct: 432  SDLSKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFARANIDEDAL-----SGSIQ 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L   KE ALA  LL+  + L  V ++   H LC+YLY+++ +FS FY+ C  +  +    
Sbjct: 487  LNEPKERALAVKLLQFEEALNGVAKEGMPHILCQYLYELAGSFSSFYEACPILNAE---- 542

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             +T    RL LA  TAK +K+  D+L I+T
Sbjct: 543  -ETTKNSRLKLAALTAKTLKQGLDLLGIKT 571



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 196/334 (58%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35  EFGDYQANGAMGAAKKLG-----MNPREFAQKILE--------NADLNGIADKLEIAGPG 81

Query: 183 FVNVFLSRVYAGE------QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL+  +  E      Q  +  +    P T      +++D+SSPN+AKEMHVGHLRS
Sbjct: 82  FINIFLNPEWLAENTNSSLQAVNFGIKTANPQT------IVIDYSSPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD + R L +LG++V+R NHVGDWGTQFGMLIA+L+    +++++   ++DL+AFY+
Sbjct: 136 TIIGDAVVRTLAFLGNNVIRANHVGDWGTQFGMLIAYLEKMENEHVSEM-ELSDLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
            +K+ +D DE F ++A   VV LQ  D      W+ + D++    Q+ Y+RLNVTLTE+ 
Sbjct: 195 AAKEHYDSDEAFAEKARNYVVKLQSSDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKD 254

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   + ++V  L+ KGL   DDG  +++ +   ++   PM ++  K DGGF Y 
Sbjct: 255 VMGESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+AA + R E  KAD  +  +D R    + QA
Sbjct: 315 TTDIAAAKYRYETLKADRALVFSDSRQAQHMQQA 348



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 195/333 (58%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILE--------NADLNGIADKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGE------QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL+  +  E      Q  +  +    P T      +++D+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLNPEWLAENTNSSLQAVNFGIKTANPQT------IVIDYSSPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD + R L +LG++V+R NHVGDWGTQFGMLIA+L+    +++++   ++DL+AFY+
Sbjct: 136  TIIGDAVVRTLAFLGNNVIRANHVGDWGTQFGMLIAYLEKMENEHVSEM-ELSDLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
             +K+ +D DE F ++A   VV LQ  D      W+ + D++    Q+ Y+RLNVTLTE+ 
Sbjct: 195  AAKEHYDSDEAFAEKARNYVVKLQSSDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKD 254

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   + ++V  L+ KGL   DDG  +++ +   ++   PM ++  K DGGF Y 
Sbjct: 255  VMGESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+AA + R E  KAD  +  +D R    + Q
Sbjct: 315  TTDIAAAKYRYETLKADRALVFSDSRQAQHMQQ 347


>gi|224583587|ref|YP_002637385.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Paratyphi C strain RKS4594]
 gi|224468114|gb|ACN45944.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Paratyphi C strain RKS4594]
          Length = 563

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 67

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 183

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 303

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 304  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 362

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 363  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 420

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 421  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 476

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 477  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 532

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 533  --VRNSRLKLAQLTAKTLKLGLDTLGIET 559



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 21  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 67

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 125 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 183

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 244 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 303

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 304 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 334



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 67

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 183

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 303

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 304  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 333


>gi|193065443|ref|ZP_03046512.1| arginyl-tRNA synthetase [Escherichia coli E22]
 gi|260844286|ref|YP_003222064.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855816|ref|YP_003229707.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868474|ref|YP_003234876.1| arginyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|415792275|ref|ZP_11495800.1| arginyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|415805125|ref|ZP_11501334.1| arginyl-tRNA synthetase [Escherichia coli E128010]
 gi|415809874|ref|ZP_11502497.1| arginyl-tRNA synthetase [Escherichia coli LT-68]
 gi|415818049|ref|ZP_11507965.1| arginyl-tRNA synthetase [Escherichia coli OK1180]
 gi|417172181|ref|ZP_12002214.1| arginine--tRNA ligase [Escherichia coli 3.2608]
 gi|417187716|ref|ZP_12012382.1| arginine--tRNA ligase [Escherichia coli 93.0624]
 gi|417189752|ref|ZP_12012890.1| arginine--tRNA ligase [Escherichia coli 4.0522]
 gi|417206947|ref|ZP_12019582.1| arginine--tRNA ligase [Escherichia coli JB1-95]
 gi|417249079|ref|ZP_12040864.1| arginine--tRNA ligase [Escherichia coli 4.0967]
 gi|417298139|ref|ZP_12085381.1| arginine--tRNA ligase [Escherichia coli 900105 (10e)]
 gi|417592030|ref|ZP_12242729.1| arginyl-tRNA synthetase [Escherichia coli 2534-86]
 gi|417623721|ref|ZP_12274024.1| arginyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
 gi|419197278|ref|ZP_13740671.1| arginyl-tRNA synthetase [Escherichia coli DEC8A]
 gi|419203712|ref|ZP_13746907.1| arginyl-tRNA synthetase [Escherichia coli DEC8B]
 gi|419209795|ref|ZP_13752882.1| arginyl-tRNA synthetase [Escherichia coli DEC8C]
 gi|419215866|ref|ZP_13758868.1| arginyl-tRNA synthetase [Escherichia coli DEC8D]
 gi|419221672|ref|ZP_13764602.1| arginyl-tRNA synthetase [Escherichia coli DEC8E]
 gi|419226974|ref|ZP_13769839.1| arginyl-tRNA synthetase [Escherichia coli DEC9A]
 gi|419249354|ref|ZP_13791943.1| arginyl-tRNA synthetase [Escherichia coli DEC9E]
 gi|419255150|ref|ZP_13797672.1| arginyl-tRNA synthetase [Escherichia coli DEC10A]
 gi|419261367|ref|ZP_13803792.1| arginyl-tRNA synthetase [Escherichia coli DEC10B]
 gi|419267276|ref|ZP_13809633.1| arginyl-tRNA synthetase [Escherichia coli DEC10C]
 gi|419284318|ref|ZP_13826500.1| arginyl-tRNA synthetase [Escherichia coli DEC10F]
 gi|419295172|ref|ZP_13837218.1| arginyl-tRNA synthetase [Escherichia coli DEC11B]
 gi|419300479|ref|ZP_13842479.1| arginyl-tRNA synthetase [Escherichia coli DEC11C]
 gi|419306522|ref|ZP_13848426.1| arginyl-tRNA synthetase [Escherichia coli DEC11D]
 gi|419311548|ref|ZP_13853415.1| arginyl-tRNA synthetase [Escherichia coli DEC11E]
 gi|419869514|ref|ZP_14391718.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
 gi|419878131|ref|ZP_14399608.1| arginyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
 gi|419879999|ref|ZP_14401415.1| arginyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
 gi|419890981|ref|ZP_14411155.1| arginyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
 gi|419897226|ref|ZP_14416819.1| arginyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
 gi|419901599|ref|ZP_14420925.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
 gi|419905441|ref|ZP_14424408.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
 gi|420091488|ref|ZP_14603235.1| arginyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
 gi|420095239|ref|ZP_14606763.1| arginyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
 gi|420104114|ref|ZP_14614872.1| arginyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
 gi|420107908|ref|ZP_14618218.1| arginyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
 gi|420114042|ref|ZP_14623730.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
 gi|420123704|ref|ZP_14632585.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
 gi|420128371|ref|ZP_14636929.1| arginyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
 gi|420133852|ref|ZP_14642022.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
 gi|420391560|ref|ZP_14890817.1| arginyl-tRNA synthetase [Escherichia coli EPEC C342-62]
 gi|424753397|ref|ZP_18181354.1| arginyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
 gi|424760779|ref|ZP_18188384.1| arginyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
 gi|424774496|ref|ZP_18201510.1| arginyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
 gi|425379654|ref|ZP_18763764.1| arginine--tRNA ligase [Escherichia coli EC1865]
 gi|192926848|gb|EDV81473.1| arginyl-tRNA synthetase [Escherichia coli E22]
 gi|257754465|dbj|BAI25967.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759433|dbj|BAI30930.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764830|dbj|BAI36325.1| arginyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|323152635|gb|EFZ38911.1| arginyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323158639|gb|EFZ44653.1| arginyl-tRNA synthetase [Escherichia coli E128010]
 gi|323174607|gb|EFZ60228.1| arginyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180673|gb|EFZ66218.1| arginyl-tRNA synthetase [Escherichia coli OK1180]
 gi|345340690|gb|EGW73108.1| arginyl-tRNA synthetase [Escherichia coli 2534-86]
 gi|345378967|gb|EGX10885.1| arginyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
 gi|378048590|gb|EHW10944.1| arginyl-tRNA synthetase [Escherichia coli DEC8A]
 gi|378050423|gb|EHW12751.1| arginyl-tRNA synthetase [Escherichia coli DEC8B]
 gi|378055026|gb|EHW17294.1| arginyl-tRNA synthetase [Escherichia coli DEC8C]
 gi|378062350|gb|EHW24527.1| arginyl-tRNA synthetase [Escherichia coli DEC8D]
 gi|378067159|gb|EHW29285.1| arginyl-tRNA synthetase [Escherichia coli DEC8E]
 gi|378076065|gb|EHW38078.1| arginyl-tRNA synthetase [Escherichia coli DEC9A]
 gi|378096727|gb|EHW58497.1| arginyl-tRNA synthetase [Escherichia coli DEC9E]
 gi|378101314|gb|EHW63001.1| arginyl-tRNA synthetase [Escherichia coli DEC10A]
 gi|378107483|gb|EHW69103.1| arginyl-tRNA synthetase [Escherichia coli DEC10B]
 gi|378112048|gb|EHW73628.1| arginyl-tRNA synthetase [Escherichia coli DEC10C]
 gi|378133783|gb|EHW95118.1| arginyl-tRNA synthetase [Escherichia coli DEC10F]
 gi|378142259|gb|EHX03461.1| arginyl-tRNA synthetase [Escherichia coli DEC11B]
 gi|378149957|gb|EHX11077.1| arginyl-tRNA synthetase [Escherichia coli DEC11D]
 gi|378151368|gb|EHX12480.1| arginyl-tRNA synthetase [Escherichia coli DEC11C]
 gi|378158649|gb|EHX19667.1| arginyl-tRNA synthetase [Escherichia coli DEC11E]
 gi|386179879|gb|EIH57353.1| arginine--tRNA ligase [Escherichia coli 3.2608]
 gi|386181373|gb|EIH64136.1| arginine--tRNA ligase [Escherichia coli 93.0624]
 gi|386192305|gb|EIH81034.1| arginine--tRNA ligase [Escherichia coli 4.0522]
 gi|386197403|gb|EIH91607.1| arginine--tRNA ligase [Escherichia coli JB1-95]
 gi|386221062|gb|EII37525.1| arginine--tRNA ligase [Escherichia coli 4.0967]
 gi|386258407|gb|EIJ13886.1| arginine--tRNA ligase [Escherichia coli 900105 (10e)]
 gi|388335888|gb|EIL02437.1| arginyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
 gi|388342719|gb|EIL08753.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
 gi|388351893|gb|EIL17069.1| arginyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
 gi|388355804|gb|EIL20626.1| arginyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
 gi|388370153|gb|EIL33696.1| arginyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
 gi|388375757|gb|EIL38758.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
 gi|388381308|gb|EIL43876.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
 gi|391313325|gb|EIQ70918.1| arginyl-tRNA synthetase [Escherichia coli EPEC C342-62]
 gi|394383073|gb|EJE60681.1| arginyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
 gi|394385798|gb|EJE63317.1| arginyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
 gi|394393838|gb|EJE70490.1| arginyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
 gi|394405305|gb|EJE80522.1| arginyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
 gi|394410242|gb|EJE84652.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
 gi|394411503|gb|EJE85731.1| arginyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
 gi|394416359|gb|EJE90155.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
 gi|394424015|gb|EJE97220.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
 gi|408298216|gb|EKJ16167.1| arginine--tRNA ligase [Escherichia coli EC1865]
 gi|421933874|gb|EKT91653.1| arginyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
 gi|421935619|gb|EKT93307.1| arginyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
 gi|421945450|gb|EKU02666.1| arginyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
          Length = 577

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQ 347


>gi|417517770|ref|ZP_12180287.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Uganda str. R8-3404]
 gi|353650909|gb|EHC93141.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Uganda str. R8-3404]
          Length = 577

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRMLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRMLYYIDSRQHQHLMQA 348



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRMLYYIDSRQHQHLMQ 347


>gi|300819860|ref|ZP_07100045.1| arginyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|415874783|ref|ZP_11541716.1| arginine--tRNA ligase [Escherichia coli MS 79-10]
 gi|300527557|gb|EFK48619.1| arginyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|342929985|gb|EGU98707.1| arginine--tRNA ligase [Escherichia coli MS 79-10]
          Length = 577

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNSIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNSIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNSIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|387121890|ref|YP_006287773.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|416034780|ref|ZP_11573372.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype a str. H5P1]
 gi|416043983|ref|ZP_11574841.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype d str. I63B]
 gi|429733894|ref|ZP_19267946.1| arginine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
 gi|347996679|gb|EGY37738.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype d str. I63B]
 gi|347997762|gb|EGY38732.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype a str. H5P1]
 gi|385876382|gb|AFI87941.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|429154074|gb|EKX96828.1| arginine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
          Length = 577

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 332/564 (58%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + S           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLS--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KA   +  +D  Q  H +      +KAG + P+  ++++  FG++LG+D K 
Sbjct: 321  AKYRYETLKASRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEYKNFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL++LLDE + R+   +  K+  T L+  E ++  +AV  G +KYADLS N
Sbjct: 380  FKTRSGDTVKLADLLDEAIERAGVLISQKS--TALSEQEKADVIEAVGIGSVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI   + IN  ++  A+    ++L +EKE
Sbjct: 438  RITDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQINPAEVEQAS----LTLTNEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +     V  
Sbjct: 494  RALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEHCPILNNEDQ----QVKL 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T + +K+  D+L I+T
Sbjct: 550  SRLKLALLTERTLKQGLDLLGIKT 573



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 188/328 (57%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + S           L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----INPREFAQLVLS--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142 VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201 DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261 YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E  KA   +  +D R    + QA
Sbjct: 321 AKYRYETLKASRALVFSDTRQSQHMQQA 348



 Score =  233 bits (593), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 187/327 (57%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + S           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLS--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KA   +  +D R    + Q
Sbjct: 321  AKYRYETLKASRALVFSDTRQSQHMQQ 347


>gi|444348287|ref|ZP_21155985.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype b str. S23A]
 gi|443547361|gb|ELT56871.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype b str. S23A]
          Length = 551

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 333/564 (59%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 9    QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 55

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 56   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 115

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 116  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 174

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 175  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 234

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 235  YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 294

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KA+  +  +D  Q  H +      +KAG + P+  +++   FG++LG+D K 
Sbjct: 295  AKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKP 353

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL++LLDE + R+   +  K+  T L+  E ++  +AV  G +KYADLS N
Sbjct: 354  FKTRSGDTVKLADLLDEAIERAGVLISQKS--TALSEQEKADVIEAVGIGSVKYADLSKN 411

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI   + I+   ++ A    P++L +EKE
Sbjct: 412  RITDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQISPGKVKQA----PLTLTNEKE 467

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +     V  
Sbjct: 468  RALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEHCPILNNEDQ----QVKL 523

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T + +K+  D+L I+T
Sbjct: 524  SRLKLALLTERTLKQGLDLLGIKT 547



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 190/328 (57%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 9   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 55

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 56  FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 115

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 116 VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 174

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 175 DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 234

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 235 YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 294

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E  KA+  +  +D R    + QA
Sbjct: 295 AKYRYETLKANRALVFSDTRQSQHMQQA 322



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 189/327 (57%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 9    QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 55

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 56   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 115

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 116  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 174

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 175  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 234

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 235  YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 294

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KA+  +  +D R    + Q
Sbjct: 295  AKYRYETLKANRALVFSDTRQSQHMQQ 321


>gi|187731263|ref|YP_001880686.1| arginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|218554464|ref|YP_002387377.1| arginyl-tRNA synthetase [Escherichia coli IAI1]
 gi|300904762|ref|ZP_07122591.1| arginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300917544|ref|ZP_07134200.1| arginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|301306901|ref|ZP_07212947.1| arginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|332278952|ref|ZP_08391365.1| arginyl-tRNA synthetase [Shigella sp. D9]
 gi|415861188|ref|ZP_11534854.1| arginyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|416259591|ref|ZP_11640007.1| Arginyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|416292214|ref|ZP_11650119.1| Arginyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|416345500|ref|ZP_11678982.1| Arginyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|419278253|ref|ZP_13820507.1| arginyl-tRNA synthetase [Escherichia coli DEC10E]
 gi|419370301|ref|ZP_13911422.1| arginyl-tRNA synthetase [Escherichia coli DEC14A]
 gi|419375753|ref|ZP_13916782.1| arginyl-tRNA synthetase [Escherichia coli DEC14B]
 gi|419381069|ref|ZP_13922025.1| arginyl-tRNA synthetase [Escherichia coli DEC14C]
 gi|419386342|ref|ZP_13927223.1| arginyl-tRNA synthetase [Escherichia coli DEC14D]
 gi|419391864|ref|ZP_13932678.1| arginyl-tRNA synthetase [Escherichia coli DEC15A]
 gi|419396954|ref|ZP_13937724.1| arginyl-tRNA synthetase [Escherichia coli DEC15B]
 gi|419402278|ref|ZP_13943002.1| arginyl-tRNA synthetase [Escherichia coli DEC15C]
 gi|419407392|ref|ZP_13948082.1| arginyl-tRNA synthetase [Escherichia coli DEC15D]
 gi|419412963|ref|ZP_13953618.1| arginyl-tRNA synthetase [Escherichia coli DEC15E]
 gi|419923767|ref|ZP_14441692.1| arginyl-tRNA synthetase [Escherichia coli 541-15]
 gi|419950164|ref|ZP_14466384.1| arginyl-tRNA synthetase [Escherichia coli CUMT8]
 gi|420325771|ref|ZP_14827530.1| arginyl-tRNA synthetase [Shigella flexneri CCH060]
 gi|420379529|ref|ZP_14879008.1| arginyl-tRNA synthetase [Shigella dysenteriae 225-75]
 gi|421682783|ref|ZP_16122587.1| arginyl-tRNA synthetase [Shigella flexneri 1485-80]
 gi|422761122|ref|ZP_16814881.1| arginyl-tRNA synthetase [Escherichia coli E1167]
 gi|432809539|ref|ZP_20043432.1| arginyl-tRNA synthetase [Escherichia coli KTE101]
 gi|432831856|ref|ZP_20065430.1| arginyl-tRNA synthetase [Escherichia coli KTE135]
 gi|433130419|ref|ZP_20315864.1| arginyl-tRNA synthetase [Escherichia coli KTE163]
 gi|226701378|sp|B7M2G7.1|SYR_ECO8A RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|238689519|sp|B2U4X7.1|SYR_SHIB3 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|187428255|gb|ACD07529.1| arginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|218361232|emb|CAQ98816.1| arginyl-tRNA synthetase [Escherichia coli IAI1]
 gi|300403322|gb|EFJ86860.1| arginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300415223|gb|EFJ98533.1| arginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300837876|gb|EFK65636.1| arginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|315257291|gb|EFU37259.1| arginyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320177414|gb|EFW52415.1| Arginyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320187322|gb|EFW62019.1| Arginyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320198571|gb|EFW73171.1| Arginyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|324118936|gb|EGC12825.1| arginyl-tRNA synthetase [Escherichia coli E1167]
 gi|332101304|gb|EGJ04650.1| arginyl-tRNA synthetase [Shigella sp. D9]
 gi|378129252|gb|EHW90624.1| arginyl-tRNA synthetase [Escherichia coli DEC10E]
 gi|378218688|gb|EHX78959.1| arginyl-tRNA synthetase [Escherichia coli DEC14A]
 gi|378220677|gb|EHX80929.1| arginyl-tRNA synthetase [Escherichia coli DEC14B]
 gi|378229058|gb|EHX89208.1| arginyl-tRNA synthetase [Escherichia coli DEC14C]
 gi|378232165|gb|EHX92267.1| arginyl-tRNA synthetase [Escherichia coli DEC14D]
 gi|378237985|gb|EHX97998.1| arginyl-tRNA synthetase [Escherichia coli DEC15A]
 gi|378245305|gb|EHY05243.1| arginyl-tRNA synthetase [Escherichia coli DEC15B]
 gi|378246812|gb|EHY06731.1| arginyl-tRNA synthetase [Escherichia coli DEC15C]
 gi|378254803|gb|EHY14665.1| arginyl-tRNA synthetase [Escherichia coli DEC15D]
 gi|378259348|gb|EHY19161.1| arginyl-tRNA synthetase [Escherichia coli DEC15E]
 gi|388392599|gb|EIL54015.1| arginyl-tRNA synthetase [Escherichia coli 541-15]
 gi|388417479|gb|EIL77321.1| arginyl-tRNA synthetase [Escherichia coli CUMT8]
 gi|391252200|gb|EIQ11400.1| arginyl-tRNA synthetase [Shigella flexneri CCH060]
 gi|391304222|gb|EIQ62039.1| arginyl-tRNA synthetase [Shigella dysenteriae 225-75]
 gi|404340232|gb|EJZ66660.1| arginyl-tRNA synthetase [Shigella flexneri 1485-80]
 gi|431362307|gb|ELG48885.1| arginyl-tRNA synthetase [Escherichia coli KTE101]
 gi|431375826|gb|ELG61149.1| arginyl-tRNA synthetase [Escherichia coli KTE135]
 gi|431647467|gb|ELJ14951.1| arginyl-tRNA synthetase [Escherichia coli KTE163]
          Length = 577

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417357488|ref|ZP_12132611.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Give str. S5-487]
 gi|353593922|gb|EHC51568.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Give str. S5-487]
          Length = 562

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 20   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 66

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 67   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 123

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 124  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 182

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 183  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 242

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 243  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 302

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 303  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 361

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 362  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 419

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 420  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 475

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 476  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 531

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 532  --VRNSRLKLAQLTAKTLKLGLDTLGIET 558



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 20  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 66

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 67  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 123

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 124 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 182

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 183 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 242

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 243 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 302

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 303 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 333



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 20   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 66

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 67   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 123

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 124  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 182

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 183  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 242

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 243  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 302

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 303  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 332


>gi|82543644|ref|YP_407591.1| arginyl-tRNA synthetase [Shigella boydii Sb227]
 gi|417681473|ref|ZP_12330848.1| arginyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|420351914|ref|ZP_14853079.1| arginyl-tRNA synthetase [Shigella boydii 4444-74]
 gi|109895034|sp|Q322J5.1|SYR_SHIBS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|81245055|gb|ABB65763.1| arginine tRNA synthetase [Shigella boydii Sb227]
 gi|332096695|gb|EGJ01686.1| arginyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|391285636|gb|EIQ44210.1| arginyl-tRNA synthetase [Shigella boydii 4444-74]
          Length = 577

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWHKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWHKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWHKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|424838263|ref|ZP_18262900.1| arginyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
 gi|383467315|gb|EID62336.1| arginyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
          Length = 577

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN +  +   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPY--MPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|418465109|ref|ZP_13036046.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans RhAA1]
 gi|359756041|gb|EHK90200.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans RhAA1]
          Length = 577

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 234/568 (41%), Positives = 331/568 (58%), Gaps = 41/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----VNPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL   +  E I     N V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLKDGWLAENIG----NAVKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       + DL+AFY+ +
Sbjct: 138  IGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELRDLEAFYRAA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            KK +DED IF ++A   VV LQ  D   +  W+ +  ++    Q  YDRLNVTLTE+   
Sbjct: 197  KKHYDEDPIFAEKARNYVVKLQSGDEYCRTMWQKLVKITMHQNQHNYDRLNVTLTEKDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTS 800
            GES Y   +  +V  L+K+ L   DDG  +++      +D G + + + K DGGF Y T+
Sbjct: 257  GESLYNPMLPDIVEDLKKQALAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTT 316

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+AA + R E  KA+  +  +D  Q  H +      +KAG + P+  +++   FG++LG+
Sbjct: 317  DIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGK 375

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D K FKTRSGDTVKL++LLDE + R+ D L  + + T L+  E ++  +AV  G +KYAD
Sbjct: 376  DGKPFKTRSGDTVKLADLLDEAIERA-DVLISQ-KSTALSEQEKADVIEAVGIGSVKYAD 433

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  DYVF +D ML   GNTA Y+ YAYTRI SI   + IN  ++  A    P++L 
Sbjct: 434  LSKNRTTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQINPGEVEQA----PLTLT 489

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             EKE  LA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +    
Sbjct: 490  DEKERVLAIKLLQFEEAIQLVAKDGVPHVLCAYLYELAGVFSSFYEHCPILNSEDQ---- 545

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             V   RL LA  T + +K+  D+L I+T
Sbjct: 546  QVKLSRLKLALLTERTLKQGLDLLGIKT 573



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 189/332 (56%), Gaps = 30/332 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----VNPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL   +  E I     N V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTI
Sbjct: 82  FINIFLKDGWLAENIG----NAVKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       + DL+AFY+ +
Sbjct: 138 IGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELRDLEAFYRAA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           KK +DED IF ++A   VV LQ  D   +  W+ +  ++    Q  YDRLNVTLTE+   
Sbjct: 197 KKHYDEDPIFAEKARNYVVKLQSGDEYCRTMWQKLVKITMHQNQHNYDRLNVTLTEKDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTS 410
           GES Y   +  +V  L+K+ L   DDG  +++      +D G + + + K DGGF Y T+
Sbjct: 257 GESLYNPMLPDIVEDLKKQALAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTT 316

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           D+AA + R E  KA+  +  +D R    + QA
Sbjct: 317 DIAAAKYRYETLKANRALVFSDTRQSQHMQQA 348



 Score =  233 bits (594), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 188/331 (56%), Gaps = 30/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----VNPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL   +  E I     N V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLKDGWLAENIG----NAVKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       + DL+AFY+ +
Sbjct: 138  IGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELRDLEAFYRAA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            KK +DED IF ++A   VV LQ  D   +  W+ +  ++    Q  YDRLNVTLTE+   
Sbjct: 197  KKHYDEDPIFAEKARNYVVKLQSGDEYCRTMWQKLVKITMHQNQHNYDRLNVTLTEKDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTS 1427
            GES Y   +  +V  L+K+ L   DDG  +++      +D G + + + K DGGF Y T+
Sbjct: 257  GESLYNPMLPDIVEDLKKQALAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTT 316

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+AA + R E  KA+  +  +D R    + Q
Sbjct: 317  DIAAAKYRYETLKANRALVFSDTRQSQHMQQ 347


>gi|110641994|ref|YP_669724.1| arginyl-tRNA synthetase [Escherichia coli 536]
 gi|191173026|ref|ZP_03034560.1| arginyl-tRNA synthetase [Escherichia coli F11]
 gi|300982204|ref|ZP_07175916.1| arginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|422375129|ref|ZP_16455396.1| arginyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|432471173|ref|ZP_19713220.1| arginyl-tRNA synthetase [Escherichia coli KTE206]
 gi|432713584|ref|ZP_19948625.1| arginyl-tRNA synthetase [Escherichia coli KTE8]
 gi|433077954|ref|ZP_20264505.1| arginyl-tRNA synthetase [Escherichia coli KTE131]
 gi|123147998|sp|Q0TGV6.1|SYR_ECOL5 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|110343586|gb|ABG69823.1| arginyl-tRNA synthetase [Escherichia coli 536]
 gi|190906737|gb|EDV66342.1| arginyl-tRNA synthetase [Escherichia coli F11]
 gi|300307274|gb|EFJ61794.1| arginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|324013521|gb|EGB82740.1| arginyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|430998391|gb|ELD14632.1| arginyl-tRNA synthetase [Escherichia coli KTE206]
 gi|431257387|gb|ELF50311.1| arginyl-tRNA synthetase [Escherichia coli KTE8]
 gi|431597625|gb|ELI67531.1| arginyl-tRNA synthetase [Escherichia coli KTE131]
          Length = 577

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/567 (40%), Positives = 323/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 189/330 (57%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|419345507|ref|ZP_13886885.1| arginyl-tRNA synthetase [Escherichia coli DEC13A]
 gi|419349928|ref|ZP_13891272.1| arginyl-tRNA synthetase [Escherichia coli DEC13B]
 gi|378187425|gb|EHX48037.1| arginyl-tRNA synthetase [Escherichia coli DEC13A]
 gi|378202289|gb|EHX62728.1| arginyl-tRNA synthetase [Escherichia coli DEC13B]
          Length = 576

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 324/570 (56%), Gaps = 46/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQEN--AGEMELADLEGFYRDAK 196

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 197  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 256

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 257  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 313

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 314  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 372

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 373  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 430

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 431  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 487  IREDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 544

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 545  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 572



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 192/336 (57%), Gaps = 35/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQEN--AGEMELADLEGFYRDAK 196

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 197 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 256

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 257 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 313

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 314 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 349



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 190/333 (57%), Gaps = 35/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQEN--AGEMELADLEGFYRDAK 196

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 197  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 256

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 257  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 313

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 314  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 346


>gi|26248143|ref|NP_754183.1| arginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|170019779|ref|YP_001724733.1| arginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|194439027|ref|ZP_03071110.1| arginyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209919302|ref|YP_002293386.1| arginyl-tRNA synthetase [Escherichia coli SE11]
 gi|222156620|ref|YP_002556759.1| Arginyl-tRNA synthetase [Escherichia coli LF82]
 gi|227885696|ref|ZP_04003501.1| arginyl-tRNA synthetase [Escherichia coli 83972]
 gi|293446263|ref|ZP_06662685.1| arginyl-tRNA synthetase [Escherichia coli B088]
 gi|300994045|ref|ZP_07180664.1| arginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301050768|ref|ZP_07197626.1| arginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|306814294|ref|ZP_07448460.1| arginyl-tRNA synthetase [Escherichia coli NC101]
 gi|312967079|ref|ZP_07781297.1| arginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|331668572|ref|ZP_08369420.1| arginine--tRNA ligase [Escherichia coli TA271]
 gi|331677761|ref|ZP_08378436.1| arginine--tRNA ligase [Escherichia coli H591]
 gi|386614433|ref|YP_006134099.1| arginyl-tRNA synthetase ArgS [Escherichia coli UMNK88]
 gi|386619462|ref|YP_006139042.1| arginyl-tRNA synthetase [Escherichia coli NA114]
 gi|386629579|ref|YP_006149299.1| arginyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
 gi|386634499|ref|YP_006154218.1| arginyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
 gi|386639403|ref|YP_006106201.1| arginine tRNA synthetase [Escherichia coli ABU 83972]
 gi|387617215|ref|YP_006120237.1| arginyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|387829789|ref|YP_003349726.1| arginyl-tRNA synthetase [Escherichia coli SE15]
 gi|415826100|ref|ZP_11513375.1| arginyl-tRNA synthetase [Escherichia coli OK1357]
 gi|415842498|ref|ZP_11523145.1| arginyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|417133582|ref|ZP_11978367.1| arginine--tRNA ligase [Escherichia coli 5.0588]
 gi|417138119|ref|ZP_11981852.1| arginine--tRNA ligase [Escherichia coli 97.0259]
 gi|417149883|ref|ZP_11989801.1| arginine--tRNA ligase [Escherichia coli 1.2264]
 gi|417154243|ref|ZP_11992372.1| arginine--tRNA ligase [Escherichia coli 96.0497]
 gi|417222195|ref|ZP_12025635.1| arginine--tRNA ligase [Escherichia coli 96.154]
 gi|417247702|ref|ZP_12040458.1| arginine--tRNA ligase [Escherichia coli 9.0111]
 gi|417266053|ref|ZP_12053422.1| arginine--tRNA ligase [Escherichia coli 3.3884]
 gi|417283217|ref|ZP_12070514.1| arginine--tRNA ligase [Escherichia coli 3003]
 gi|417286849|ref|ZP_12074136.1| arginine--tRNA ligase [Escherichia coli TW07793]
 gi|417308348|ref|ZP_12095201.1| Arginyl-tRNA synthetase [Escherichia coli PCN033]
 gi|417581405|ref|ZP_12232207.1| arginyl-tRNA synthetase [Escherichia coli STEC_B2F1]
 gi|417602475|ref|ZP_12253045.1| arginyl-tRNA synthetase [Escherichia coli STEC_94C]
 gi|417629053|ref|ZP_12279293.1| arginyl-tRNA synthetase [Escherichia coli STEC_MHI813]
 gi|417667320|ref|ZP_12316865.1| arginyl-tRNA synthetase [Escherichia coli STEC_O31]
 gi|417755923|ref|ZP_12404007.1| arginyl-tRNA synthetase [Escherichia coli DEC2B]
 gi|418044070|ref|ZP_12682219.1| arginyl-tRNA synthetase [Escherichia coli W26]
 gi|418997094|ref|ZP_13544694.1| arginyl-tRNA synthetase [Escherichia coli DEC1A]
 gi|419002337|ref|ZP_13549873.1| arginyl-tRNA synthetase [Escherichia coli DEC1B]
 gi|419007931|ref|ZP_13555371.1| arginyl-tRNA synthetase [Escherichia coli DEC1C]
 gi|419013713|ref|ZP_13561068.1| arginyl-tRNA synthetase [Escherichia coli DEC1D]
 gi|419018542|ref|ZP_13565853.1| arginyl-tRNA synthetase [Escherichia coli DEC1E]
 gi|419024184|ref|ZP_13571415.1| arginyl-tRNA synthetase [Escherichia coli DEC2A]
 gi|419029230|ref|ZP_13576402.1| arginyl-tRNA synthetase [Escherichia coli DEC2C]
 gi|419034507|ref|ZP_13581598.1| arginyl-tRNA synthetase [Escherichia coli DEC2D]
 gi|419039829|ref|ZP_13586870.1| arginyl-tRNA synthetase [Escherichia coli DEC2E]
 gi|419159448|ref|ZP_13703957.1| arginyl-tRNA synthetase [Escherichia coli DEC6D]
 gi|419164666|ref|ZP_13709123.1| arginyl-tRNA synthetase [Escherichia coli DEC6E]
 gi|419805763|ref|ZP_14330890.1| arginyl-tRNA synthetase [Escherichia coli AI27]
 gi|419914094|ref|ZP_14432499.1| arginyl-tRNA synthetase [Escherichia coli KD1]
 gi|422354028|ref|ZP_16434775.1| arginyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|422366990|ref|ZP_16447447.1| arginyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|422790876|ref|ZP_16843580.1| arginyl-tRNA synthetase [Escherichia coli TA007]
 gi|422835837|ref|ZP_16883889.1| arginyl-tRNA synthetase [Escherichia coli E101]
 gi|422973338|ref|ZP_16975722.1| arginyl-tRNA synthetase [Escherichia coli TA124]
 gi|423705864|ref|ZP_17680247.1| arginyl-tRNA synthetase [Escherichia coli B799]
 gi|425278124|ref|ZP_18669388.1| arginine--tRNA ligase [Escherichia coli ARS4.2123]
 gi|425300646|ref|ZP_18690590.1| arginine--tRNA ligase [Escherichia coli 07798]
 gi|425305426|ref|ZP_18695168.1| arginine--tRNA ligase [Escherichia coli N1]
 gi|432381541|ref|ZP_19624486.1| arginyl-tRNA synthetase [Escherichia coli KTE15]
 gi|432387357|ref|ZP_19630247.1| arginyl-tRNA synthetase [Escherichia coli KTE16]
 gi|432392349|ref|ZP_19635186.1| arginyl-tRNA synthetase [Escherichia coli KTE21]
 gi|432412090|ref|ZP_19654756.1| arginyl-tRNA synthetase [Escherichia coli KTE39]
 gi|432422138|ref|ZP_19664686.1| arginyl-tRNA synthetase [Escherichia coli KTE178]
 gi|432432085|ref|ZP_19674517.1| arginyl-tRNA synthetase [Escherichia coli KTE187]
 gi|432435957|ref|ZP_19678350.1| arginyl-tRNA synthetase [Escherichia coli KTE188]
 gi|432449971|ref|ZP_19692239.1| arginyl-tRNA synthetase [Escherichia coli KTE193]
 gi|432456902|ref|ZP_19699089.1| arginyl-tRNA synthetase [Escherichia coli KTE201]
 gi|432481218|ref|ZP_19723176.1| arginyl-tRNA synthetase [Escherichia coli KTE210]
 gi|432485633|ref|ZP_19727549.1| arginyl-tRNA synthetase [Escherichia coli KTE212]
 gi|432495935|ref|ZP_19737734.1| arginyl-tRNA synthetase [Escherichia coli KTE214]
 gi|432500230|ref|ZP_19741990.1| arginyl-tRNA synthetase [Escherichia coli KTE216]
 gi|432504602|ref|ZP_19746332.1| arginyl-tRNA synthetase [Escherichia coli KTE220]
 gi|432514108|ref|ZP_19751334.1| arginyl-tRNA synthetase [Escherichia coli KTE224]
 gi|432523976|ref|ZP_19761108.1| arginyl-tRNA synthetase [Escherichia coli KTE230]
 gi|432531263|ref|ZP_19768292.1| arginyl-tRNA synthetase [Escherichia coli KTE233]
 gi|432553901|ref|ZP_19790627.1| arginyl-tRNA synthetase [Escherichia coli KTE47]
 gi|432558957|ref|ZP_19795635.1| arginyl-tRNA synthetase [Escherichia coli KTE49]
 gi|432568869|ref|ZP_19805387.1| arginyl-tRNA synthetase [Escherichia coli KTE53]
 gi|432593091|ref|ZP_19829409.1| arginyl-tRNA synthetase [Escherichia coli KTE60]
 gi|432607698|ref|ZP_19843887.1| arginyl-tRNA synthetase [Escherichia coli KTE67]
 gi|432611610|ref|ZP_19847773.1| arginyl-tRNA synthetase [Escherichia coli KTE72]
 gi|432646374|ref|ZP_19882164.1| arginyl-tRNA synthetase [Escherichia coli KTE86]
 gi|432651311|ref|ZP_19887068.1| arginyl-tRNA synthetase [Escherichia coli KTE87]
 gi|432655952|ref|ZP_19891658.1| arginyl-tRNA synthetase [Escherichia coli KTE93]
 gi|432670958|ref|ZP_19906489.1| arginyl-tRNA synthetase [Escherichia coli KTE119]
 gi|432694621|ref|ZP_19929828.1| arginyl-tRNA synthetase [Escherichia coli KTE162]
 gi|432699228|ref|ZP_19934386.1| arginyl-tRNA synthetase [Escherichia coli KTE169]
 gi|432710783|ref|ZP_19945845.1| arginyl-tRNA synthetase [Escherichia coli KTE6]
 gi|432723293|ref|ZP_19958213.1| arginyl-tRNA synthetase [Escherichia coli KTE17]
 gi|432727880|ref|ZP_19962759.1| arginyl-tRNA synthetase [Escherichia coli KTE18]
 gi|432741571|ref|ZP_19976290.1| arginyl-tRNA synthetase [Escherichia coli KTE23]
 gi|432745851|ref|ZP_19980520.1| arginyl-tRNA synthetase [Escherichia coli KTE43]
 gi|432750347|ref|ZP_19984954.1| arginyl-tRNA synthetase [Escherichia coli KTE29]
 gi|432765232|ref|ZP_19999671.1| arginyl-tRNA synthetase [Escherichia coli KTE48]
 gi|432783754|ref|ZP_20017935.1| arginyl-tRNA synthetase [Escherichia coli KTE63]
 gi|432802029|ref|ZP_20036010.1| arginyl-tRNA synthetase [Escherichia coli KTE84]
 gi|432805942|ref|ZP_20039880.1| arginyl-tRNA synthetase [Escherichia coli KTE91]
 gi|432834869|ref|ZP_20068408.1| arginyl-tRNA synthetase [Escherichia coli KTE136]
 gi|432844750|ref|ZP_20077649.1| arginyl-tRNA synthetase [Escherichia coli KTE141]
 gi|432862008|ref|ZP_20086768.1| arginyl-tRNA synthetase [Escherichia coli KTE146]
 gi|432905040|ref|ZP_20113946.1| arginyl-tRNA synthetase [Escherichia coli KTE194]
 gi|432919297|ref|ZP_20123428.1| arginyl-tRNA synthetase [Escherichia coli KTE173]
 gi|432927104|ref|ZP_20128644.1| arginyl-tRNA synthetase [Escherichia coli KTE175]
 gi|432934536|ref|ZP_20134045.1| arginyl-tRNA synthetase [Escherichia coli KTE184]
 gi|432938056|ref|ZP_20136433.1| arginyl-tRNA synthetase [Escherichia coli KTE183]
 gi|432972031|ref|ZP_20160899.1| arginyl-tRNA synthetase [Escherichia coli KTE207]
 gi|432978544|ref|ZP_20167362.1| arginyl-tRNA synthetase [Escherichia coli KTE209]
 gi|432981281|ref|ZP_20170057.1| arginyl-tRNA synthetase [Escherichia coli KTE211]
 gi|432985560|ref|ZP_20174284.1| arginyl-tRNA synthetase [Escherichia coli KTE215]
 gi|432990881|ref|ZP_20179545.1| arginyl-tRNA synthetase [Escherichia coli KTE217]
 gi|432995536|ref|ZP_20184147.1| arginyl-tRNA synthetase [Escherichia coli KTE218]
 gi|433000112|ref|ZP_20188642.1| arginyl-tRNA synthetase [Escherichia coli KTE223]
 gi|433033625|ref|ZP_20221356.1| arginyl-tRNA synthetase [Escherichia coli KTE112]
 gi|433038796|ref|ZP_20226400.1| arginyl-tRNA synthetase [Escherichia coli KTE113]
 gi|433058260|ref|ZP_20245319.1| arginyl-tRNA synthetase [Escherichia coli KTE124]
 gi|433082740|ref|ZP_20269205.1| arginyl-tRNA synthetase [Escherichia coli KTE133]
 gi|433087443|ref|ZP_20273826.1| arginyl-tRNA synthetase [Escherichia coli KTE137]
 gi|433092301|ref|ZP_20278575.1| arginyl-tRNA synthetase [Escherichia coli KTE138]
 gi|433096696|ref|ZP_20282893.1| arginyl-tRNA synthetase [Escherichia coli KTE139]
 gi|433101331|ref|ZP_20287428.1| arginyl-tRNA synthetase [Escherichia coli KTE145]
 gi|433106060|ref|ZP_20292051.1| arginyl-tRNA synthetase [Escherichia coli KTE148]
 gi|433111092|ref|ZP_20296957.1| arginyl-tRNA synthetase [Escherichia coli KTE150]
 gi|433115725|ref|ZP_20301529.1| arginyl-tRNA synthetase [Escherichia coli KTE153]
 gi|433125362|ref|ZP_20310937.1| arginyl-tRNA synthetase [Escherichia coli KTE160]
 gi|433139425|ref|ZP_20324696.1| arginyl-tRNA synthetase [Escherichia coli KTE167]
 gi|433144405|ref|ZP_20329557.1| arginyl-tRNA synthetase [Escherichia coli KTE168]
 gi|433149373|ref|ZP_20334409.1| arginyl-tRNA synthetase [Escherichia coli KTE174]
 gi|433173741|ref|ZP_20358275.1| arginyl-tRNA synthetase [Escherichia coli KTE232]
 gi|433188606|ref|ZP_20372709.1| arginyl-tRNA synthetase [Escherichia coli KTE88]
 gi|433193862|ref|ZP_20377861.1| arginyl-tRNA synthetase [Escherichia coli KTE90]
 gi|433198437|ref|ZP_20382349.1| arginyl-tRNA synthetase [Escherichia coli KTE94]
 gi|433208033|ref|ZP_20391714.1| arginyl-tRNA synthetase [Escherichia coli KTE97]
 gi|433212676|ref|ZP_20396279.1| arginyl-tRNA synthetase [Escherichia coli KTE99]
 gi|442604597|ref|ZP_21019442.1| Arginyl-tRNA synthetase [Escherichia coli Nissle 1917]
 gi|29427485|sp|Q8FGQ0.1|SYR_ECOL6 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|189083533|sp|B1J0L2.1|SYR_ECOLC RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|238065088|sp|B6I0S7.1|SYR_ECOSE RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|26108547|gb|AAN80750.1|AE016762_3 Arginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|169754707|gb|ACA77406.1| arginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|194421986|gb|EDX37990.1| arginyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209912561|dbj|BAG77635.1| arginyl-tRNA synthase [Escherichia coli SE11]
 gi|222033625|emb|CAP76366.1| Arginyl-tRNA synthetase [Escherichia coli LF82]
 gi|227837269|gb|EEJ47735.1| arginyl-tRNA synthetase [Escherichia coli 83972]
 gi|281178946|dbj|BAI55276.1| arginyl-tRNA synthetase [Escherichia coli SE15]
 gi|291323093|gb|EFE62521.1| arginyl-tRNA synthetase [Escherichia coli B088]
 gi|300297585|gb|EFJ53970.1| arginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300406413|gb|EFJ89951.1| arginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|305852453|gb|EFM52904.1| arginyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553895|gb|ADN46670.1| arginine tRNA synthetase [Escherichia coli ABU 83972]
 gi|312288543|gb|EFR16445.1| arginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312946476|gb|ADR27303.1| arginyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315290304|gb|EFU49680.1| arginyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|323186348|gb|EFZ71698.1| arginyl-tRNA synthetase [Escherichia coli OK1357]
 gi|323186757|gb|EFZ72077.1| arginyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323972615|gb|EGB67818.1| arginyl-tRNA synthetase [Escherichia coli TA007]
 gi|324017993|gb|EGB87212.1| arginyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|331063766|gb|EGI35677.1| arginine--tRNA ligase [Escherichia coli TA271]
 gi|331074221|gb|EGI45541.1| arginine--tRNA ligase [Escherichia coli H591]
 gi|332343602|gb|AEE56936.1| arginyl-tRNA synthetase ArgS [Escherichia coli UMNK88]
 gi|333969963|gb|AEG36768.1| Arginyl-tRNA synthetase [Escherichia coli NA114]
 gi|338770198|gb|EGP24965.1| Arginyl-tRNA synthetase [Escherichia coli PCN033]
 gi|345337176|gb|EGW69608.1| arginyl-tRNA synthetase [Escherichia coli STEC_B2F1]
 gi|345350141|gb|EGW82416.1| arginyl-tRNA synthetase [Escherichia coli STEC_94C]
 gi|345374267|gb|EGX06220.1| arginyl-tRNA synthetase [Escherichia coli STEC_MHI813]
 gi|355420478|gb|AER84675.1| arginyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
 gi|355425398|gb|AER89594.1| arginyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
 gi|371597091|gb|EHN85916.1| arginyl-tRNA synthetase [Escherichia coli TA124]
 gi|371611610|gb|EHO00132.1| arginyl-tRNA synthetase [Escherichia coli E101]
 gi|377845711|gb|EHU10733.1| arginyl-tRNA synthetase [Escherichia coli DEC1A]
 gi|377846440|gb|EHU11452.1| arginyl-tRNA synthetase [Escherichia coli DEC1C]
 gi|377849388|gb|EHU14362.1| arginyl-tRNA synthetase [Escherichia coli DEC1B]
 gi|377858697|gb|EHU23536.1| arginyl-tRNA synthetase [Escherichia coli DEC1D]
 gi|377862272|gb|EHU27085.1| arginyl-tRNA synthetase [Escherichia coli DEC1E]
 gi|377865665|gb|EHU30456.1| arginyl-tRNA synthetase [Escherichia coli DEC2A]
 gi|377876174|gb|EHU40782.1| arginyl-tRNA synthetase [Escherichia coli DEC2B]
 gi|377880268|gb|EHU44839.1| arginyl-tRNA synthetase [Escherichia coli DEC2C]
 gi|377881577|gb|EHU46134.1| arginyl-tRNA synthetase [Escherichia coli DEC2D]
 gi|377894080|gb|EHU58505.1| arginyl-tRNA synthetase [Escherichia coli DEC2E]
 gi|378009492|gb|EHV72448.1| arginyl-tRNA synthetase [Escherichia coli DEC6D]
 gi|378010748|gb|EHV73693.1| arginyl-tRNA synthetase [Escherichia coli DEC6E]
 gi|383473021|gb|EID65051.1| arginyl-tRNA synthetase [Escherichia coli W26]
 gi|384471208|gb|EIE55292.1| arginyl-tRNA synthetase [Escherichia coli AI27]
 gi|385713256|gb|EIG50192.1| arginyl-tRNA synthetase [Escherichia coli B799]
 gi|386151436|gb|EIH02725.1| arginine--tRNA ligase [Escherichia coli 5.0588]
 gi|386158104|gb|EIH14441.1| arginine--tRNA ligase [Escherichia coli 97.0259]
 gi|386160895|gb|EIH22700.1| arginine--tRNA ligase [Escherichia coli 1.2264]
 gi|386167332|gb|EIH33848.1| arginine--tRNA ligase [Escherichia coli 96.0497]
 gi|386201997|gb|EII00988.1| arginine--tRNA ligase [Escherichia coli 96.154]
 gi|386209069|gb|EII19560.1| arginine--tRNA ligase [Escherichia coli 9.0111]
 gi|386232046|gb|EII59393.1| arginine--tRNA ligase [Escherichia coli 3.3884]
 gi|386243160|gb|EII84893.1| arginine--tRNA ligase [Escherichia coli 3003]
 gi|386249182|gb|EII95353.1| arginine--tRNA ligase [Escherichia coli TW07793]
 gi|388387439|gb|EIL49056.1| arginyl-tRNA synthetase [Escherichia coli KD1]
 gi|397784466|gb|EJK95319.1| arginyl-tRNA synthetase [Escherichia coli STEC_O31]
 gi|408202893|gb|EKI27951.1| arginine--tRNA ligase [Escherichia coli ARS4.2123]
 gi|408216793|gb|EKI41107.1| arginine--tRNA ligase [Escherichia coli 07798]
 gi|408229408|gb|EKI52840.1| arginine--tRNA ligase [Escherichia coli N1]
 gi|430906750|gb|ELC28255.1| arginyl-tRNA synthetase [Escherichia coli KTE16]
 gi|430908544|gb|ELC29937.1| arginyl-tRNA synthetase [Escherichia coli KTE15]
 gi|430919352|gb|ELC40292.1| arginyl-tRNA synthetase [Escherichia coli KTE21]
 gi|430935316|gb|ELC55638.1| arginyl-tRNA synthetase [Escherichia coli KTE39]
 gi|430944897|gb|ELC64986.1| arginyl-tRNA synthetase [Escherichia coli KTE178]
 gi|430953634|gb|ELC72532.1| arginyl-tRNA synthetase [Escherichia coli KTE187]
 gi|430964379|gb|ELC81826.1| arginyl-tRNA synthetase [Escherichia coli KTE188]
 gi|430980730|gb|ELC97479.1| arginyl-tRNA synthetase [Escherichia coli KTE193]
 gi|430982784|gb|ELC99473.1| arginyl-tRNA synthetase [Escherichia coli KTE201]
 gi|431007875|gb|ELD22686.1| arginyl-tRNA synthetase [Escherichia coli KTE210]
 gi|431016030|gb|ELD29577.1| arginyl-tRNA synthetase [Escherichia coli KTE212]
 gi|431024478|gb|ELD37643.1| arginyl-tRNA synthetase [Escherichia coli KTE214]
 gi|431029100|gb|ELD42132.1| arginyl-tRNA synthetase [Escherichia coli KTE216]
 gi|431039585|gb|ELD50405.1| arginyl-tRNA synthetase [Escherichia coli KTE220]
 gi|431042706|gb|ELD53194.1| arginyl-tRNA synthetase [Escherichia coli KTE224]
 gi|431053078|gb|ELD62714.1| arginyl-tRNA synthetase [Escherichia coli KTE230]
 gi|431054491|gb|ELD64061.1| arginyl-tRNA synthetase [Escherichia coli KTE233]
 gi|431084631|gb|ELD90760.1| arginyl-tRNA synthetase [Escherichia coli KTE47]
 gi|431092008|gb|ELD97716.1| arginyl-tRNA synthetase [Escherichia coli KTE49]
 gi|431100720|gb|ELE05690.1| arginyl-tRNA synthetase [Escherichia coli KTE53]
 gi|431128069|gb|ELE30361.1| arginyl-tRNA synthetase [Escherichia coli KTE60]
 gi|431138796|gb|ELE40608.1| arginyl-tRNA synthetase [Escherichia coli KTE67]
 gi|431149034|gb|ELE50307.1| arginyl-tRNA synthetase [Escherichia coli KTE72]
 gi|431180411|gb|ELE80298.1| arginyl-tRNA synthetase [Escherichia coli KTE86]
 gi|431191180|gb|ELE90565.1| arginyl-tRNA synthetase [Escherichia coli KTE87]
 gi|431192010|gb|ELE91384.1| arginyl-tRNA synthetase [Escherichia coli KTE93]
 gi|431211032|gb|ELF09015.1| arginyl-tRNA synthetase [Escherichia coli KTE119]
 gi|431234820|gb|ELF30214.1| arginyl-tRNA synthetase [Escherichia coli KTE162]
 gi|431244477|gb|ELF38785.1| arginyl-tRNA synthetase [Escherichia coli KTE169]
 gi|431249575|gb|ELF43730.1| arginyl-tRNA synthetase [Escherichia coli KTE6]
 gi|431265847|gb|ELF57409.1| arginyl-tRNA synthetase [Escherichia coli KTE17]
 gi|431273569|gb|ELF64643.1| arginyl-tRNA synthetase [Escherichia coli KTE18]
 gi|431283262|gb|ELF74121.1| arginyl-tRNA synthetase [Escherichia coli KTE23]
 gi|431291988|gb|ELF82484.1| arginyl-tRNA synthetase [Escherichia coli KTE43]
 gi|431297264|gb|ELF86922.1| arginyl-tRNA synthetase [Escherichia coli KTE29]
 gi|431310993|gb|ELF99173.1| arginyl-tRNA synthetase [Escherichia coli KTE48]
 gi|431329622|gb|ELG16908.1| arginyl-tRNA synthetase [Escherichia coli KTE63]
 gi|431349006|gb|ELG35848.1| arginyl-tRNA synthetase [Escherichia coli KTE84]
 gi|431355063|gb|ELG41777.1| arginyl-tRNA synthetase [Escherichia coli KTE91]
 gi|431385229|gb|ELG69216.1| arginyl-tRNA synthetase [Escherichia coli KTE136]
 gi|431395077|gb|ELG78590.1| arginyl-tRNA synthetase [Escherichia coli KTE141]
 gi|431405755|gb|ELG88988.1| arginyl-tRNA synthetase [Escherichia coli KTE146]
 gi|431433340|gb|ELH15012.1| arginyl-tRNA synthetase [Escherichia coli KTE194]
 gi|431444611|gb|ELH25633.1| arginyl-tRNA synthetase [Escherichia coli KTE173]
 gi|431445331|gb|ELH26258.1| arginyl-tRNA synthetase [Escherichia coli KTE175]
 gi|431453517|gb|ELH33924.1| arginyl-tRNA synthetase [Escherichia coli KTE184]
 gi|431464140|gb|ELH44262.1| arginyl-tRNA synthetase [Escherichia coli KTE183]
 gi|431479438|gb|ELH59173.1| arginyl-tRNA synthetase [Escherichia coli KTE209]
 gi|431482732|gb|ELH62434.1| arginyl-tRNA synthetase [Escherichia coli KTE207]
 gi|431492036|gb|ELH71639.1| arginyl-tRNA synthetase [Escherichia coli KTE211]
 gi|431494963|gb|ELH74549.1| arginyl-tRNA synthetase [Escherichia coli KTE217]
 gi|431500997|gb|ELH79983.1| arginyl-tRNA synthetase [Escherichia coli KTE215]
 gi|431507249|gb|ELH85535.1| arginyl-tRNA synthetase [Escherichia coli KTE218]
 gi|431510129|gb|ELH88376.1| arginyl-tRNA synthetase [Escherichia coli KTE223]
 gi|431552256|gb|ELI26218.1| arginyl-tRNA synthetase [Escherichia coli KTE113]
 gi|431553150|gb|ELI27080.1| arginyl-tRNA synthetase [Escherichia coli KTE112]
 gi|431570903|gb|ELI43811.1| arginyl-tRNA synthetase [Escherichia coli KTE124]
 gi|431603067|gb|ELI72494.1| arginyl-tRNA synthetase [Escherichia coli KTE133]
 gi|431606489|gb|ELI75865.1| arginyl-tRNA synthetase [Escherichia coli KTE137]
 gi|431610847|gb|ELI80131.1| arginyl-tRNA synthetase [Escherichia coli KTE138]
 gi|431616957|gb|ELI85980.1| arginyl-tRNA synthetase [Escherichia coli KTE139]
 gi|431620461|gb|ELI89338.1| arginyl-tRNA synthetase [Escherichia coli KTE145]
 gi|431628396|gb|ELI96772.1| arginyl-tRNA synthetase [Escherichia coli KTE150]
 gi|431629284|gb|ELI97650.1| arginyl-tRNA synthetase [Escherichia coli KTE148]
 gi|431635251|gb|ELJ03466.1| arginyl-tRNA synthetase [Escherichia coli KTE153]
 gi|431646747|gb|ELJ14239.1| arginyl-tRNA synthetase [Escherichia coli KTE160]
 gi|431661803|gb|ELJ28615.1| arginyl-tRNA synthetase [Escherichia coli KTE167]
 gi|431662951|gb|ELJ29719.1| arginyl-tRNA synthetase [Escherichia coli KTE168]
 gi|431672037|gb|ELJ38310.1| arginyl-tRNA synthetase [Escherichia coli KTE174]
 gi|431693631|gb|ELJ59043.1| arginyl-tRNA synthetase [Escherichia coli KTE232]
 gi|431706649|gb|ELJ71219.1| arginyl-tRNA synthetase [Escherichia coli KTE88]
 gi|431717164|gb|ELJ81266.1| arginyl-tRNA synthetase [Escherichia coli KTE90]
 gi|431723103|gb|ELJ87065.1| arginyl-tRNA synthetase [Escherichia coli KTE94]
 gi|431730452|gb|ELJ94016.1| arginyl-tRNA synthetase [Escherichia coli KTE97]
 gi|431734958|gb|ELJ98334.1| arginyl-tRNA synthetase [Escherichia coli KTE99]
 gi|441714854|emb|CCQ05419.1| Arginyl-tRNA synthetase [Escherichia coli Nissle 1917]
          Length = 577

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|425288756|ref|ZP_18679624.1| arginine--tRNA ligase, partial [Escherichia coli 3006]
 gi|408214769|gb|EKI39179.1| arginine--tRNA ligase, partial [Escherichia coli 3006]
          Length = 549

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 7    QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 53

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 54   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 110

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 111  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 169

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 170  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 229

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 230  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 286

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 287  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 345

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 346  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 403

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 404  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 459

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 460  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 517

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 518  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 545



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 7   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 53

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 54  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 110

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 111 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 169

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 170 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 229

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 230 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 286

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 287 TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 322



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 7    QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 53

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 54   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 110

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 111  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 169

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 170  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 229

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 230  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 286

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 287  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQ 319


>gi|419355324|ref|ZP_13896586.1| arginyl-tRNA synthetase [Escherichia coli DEC13C]
 gi|419360350|ref|ZP_13901571.1| arginyl-tRNA synthetase [Escherichia coli DEC13D]
 gi|419365501|ref|ZP_13906666.1| arginyl-tRNA synthetase [Escherichia coli DEC13E]
 gi|378202049|gb|EHX62489.1| arginyl-tRNA synthetase [Escherichia coli DEC13C]
 gi|378205280|gb|EHX65695.1| arginyl-tRNA synthetase [Escherichia coli DEC13D]
 gi|378213986|gb|EHX74296.1| arginyl-tRNA synthetase [Escherichia coli DEC13E]
          Length = 577

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|331647473|ref|ZP_08348565.1| arginine--tRNA ligase [Escherichia coli M605]
 gi|417662468|ref|ZP_12312049.1| arginyl-tRNA synthetase [Escherichia coli AA86]
 gi|432894692|ref|ZP_20106513.1| arginyl-tRNA synthetase [Escherichia coli KTE165]
 gi|330911686|gb|EGH40196.1| arginyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043197|gb|EGI15335.1| arginine--tRNA ligase [Escherichia coli M605]
 gi|431422605|gb|ELH04797.1| arginyl-tRNA synthetase [Escherichia coli KTE165]
          Length = 577

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILNAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|238756954|ref|ZP_04618142.1| Arginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704784|gb|EEP97313.1| Arginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 576

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 236/608 (38%), Positives = 344/608 (56%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAECEAQVRQSAKVQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +   +         L  +  K+E+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAEKVIEQL--------DLTGIASKVEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV P    + L ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVAPV---EPLTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W  + D++    Q  Y+RLNVTLT+    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRAMWRKLVDITMAQNQIAYNRLNVTLTQDDVMGESLYNPMLPGIVADLKAKGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAIERAGKLIAEKN--PDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ S+ + AGI+   L     + P+ +  E+E +LA  LL+  +V+  
Sbjct: 454  GNTAPYMQYAYTRVISVFKRAGIDESSL-----TLPLVITEEREASLATRLLQFEEVITA 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  D+E   ++    RL LA  TAK +K+ 
Sbjct: 509  VAREGTPHVMCSYLYDLAGLFSSFYEHCQILNADSEESRQS----RLKLAMLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             D L I+T
Sbjct: 565  LDTLGIQT 572



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/372 (37%), Positives = 206/372 (55%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPAECEAQVRQSAKVQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +   +         L  +  K+E+A PGF+N+FL R +  E+++  +   
Sbjct: 53  -MQPRQLAEKVIEQL--------DLTGIASKVEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GV P    + L ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104 KLGVAPV---EPLTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W  + D++    Q  Y+RLNVTLT+    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRAMWRKLVDITMAQNQIAYNRLNVTLTQDDVMGESLYNPMLPGIVADLKAKGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280 ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/371 (37%), Positives = 205/371 (55%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAECEAQVRQSAKVQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +   +         L  +  K+E+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAEKVIEQL--------DLTGIASKVEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV P    + L ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R NHVG
Sbjct: 104  KLGVAPV---EPLTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F KRA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W  + D++    Q  Y+RLNVTLT+    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRAMWRKLVDITMAQNQIAYNRLNVTLTQDDVMGESLYNPMLPGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|418794726|ref|ZP_13350444.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19449]
 gi|392760940|gb|EJA17771.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 19449]
          Length = 577

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 329/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ+   + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVLQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 194/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ+   + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVLQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 193/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ+   + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVLQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417364712|ref|ZP_12137565.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Hvittingfoss str. A4-620]
 gi|353596406|gb|EHC53405.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Hvittingfoss str. A4-620]
          Length = 563

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 67

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQREN-AGDMALADLEGFYRDAK 183

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 303

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 304  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 362

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 363  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 420

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 421  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 476

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 477  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 532

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              +   RL LA+ TAK +K   D L I T
Sbjct: 533  --IRNSRLKLAQLTAKTLKLGLDTLGIET 559



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 21  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 67

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 125 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQREN-AGDMALADLEGFYRDAK 183

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 244 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 303

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 304 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 334



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 67

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQREN-AGDMALADLEGFYRDAK 183

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 303

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 304  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 333


>gi|386745334|ref|YP_006218513.1| arginyl-tRNA synthetase [Providencia stuartii MRSN 2154]
 gi|384482027|gb|AFH95822.1| arginyl-tRNA synthetase [Providencia stuartii MRSN 2154]
          Length = 576

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 233/605 (38%), Positives = 342/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+Q A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP  +A+ I S        +  L  +  K+E+A PGF+N+FL   +   Q++  +   
Sbjct: 53   -INPRQLAEQIVS--------HLDLEGIASKVEIAGPGFINIFLEPSWLTTQVEQALTCD 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVG
Sbjct: 104  RLGLSPV---KSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+K+ +D DE+F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMALADLEEFYREAKQHYDSDEVFAERARGYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNDMLPGIVADLKAKGLAV 279

Query: 769  LDDGRKIMWGED---RGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++ ++   +   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVYLDEFKTKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRALYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TV+LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMSLEHHMFGMMLGKDGKPFKTRSGGTVRLSDLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   ++ KN   ++   EL+     V  G +KYADLS +R  DY+F +D ML   GNT
Sbjct: 399  ERAQVLIRSKN--PDMPEDELNNVANVVGIGSVKYADLSKSRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+ASI + A +   DL     + P+ L+  +E ALA  L++  + +++V R
Sbjct: 457  APYMQYAYTRVASIFKKANVTQADL-----TLPIVLQDPREIALATRLMQFEETILMVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   H +C YLYD++  FS FY++C  +  + E + ++    RL LA  T K +K   D 
Sbjct: 512  DGTPHVMCAYLYDLAGLFSSFYEHCPILSAEDEAQRQS----RLKLALLTQKTLKAGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIDT 572



 Score =  241 bits (615), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/422 (36%), Positives = 225/422 (53%), Gaps = 35/422 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+Q A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP  +A+ I S        +  L  +  K+E+A PGF+N+FL   +   Q++  +   
Sbjct: 53  -INPRQLAEQIVS--------HLDLEGIASKVEIAGPGFINIFLEPSWLTTQVEQALTCD 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVG
Sbjct: 104 RLGLSPV---KSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+K+ +D DE+F +RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNENASDMALADLEEFYREAKQHYDSDEVFAERARGYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNDMLPGIVADLKAKGLAV 279

Query: 379 LDDGRKIMWGED---RGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++ ++   +   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280 ESEGATVVYLDEFKTKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRALYYIDS 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R +  ++QA     K   I  S S +       +     P + R      LSD+   A++
Sbjct: 340 RQHQHLMQAWTIVRKAGYIPESMSLEHHMFGMMLGKDGKPFKTRSGGTVRLSDLLDEAIE 399

Query: 491 VA 492
            A
Sbjct: 400 RA 401



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 140/368 (38%), Positives = 207/368 (56%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+Q A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP  +A+ I S        +  L  +  K+E+A PGF+N+FL   +   Q++  +   
Sbjct: 53   -INPRQLAEQIVS--------HLDLEGIASKVEIAGPGFINIFLEPSWLTTQVEQALTCD 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVG
Sbjct: 104  RLGLSPV---KSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+K+ +D DE+F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMALADLEEFYREAKQHYDSDEVFAERARGYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNDMLPGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMWGED---RGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++ ++   +   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVYLDEFKTKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRALYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|432534124|ref|ZP_19771102.1| arginyl-tRNA synthetase [Escherichia coli KTE234]
 gi|431061274|gb|ELD70593.1| arginyl-tRNA synthetase [Escherichia coli KTE234]
          Length = 577

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGMPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417707760|ref|ZP_12356799.1| arginyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|417712791|ref|ZP_12361768.1| arginyl-tRNA synthetase [Shigella flexneri K-272]
 gi|417717511|ref|ZP_12366422.1| arginyl-tRNA synthetase [Shigella flexneri K-227]
 gi|417828191|ref|ZP_12474747.1| arginyl-tRNA synthetase [Shigella flexneri J1713]
 gi|420320643|ref|ZP_14822477.1| arginyl-tRNA synthetase [Shigella flexneri 2850-71]
 gi|420331569|ref|ZP_14833234.1| arginyl-tRNA synthetase [Shigella flexneri K-1770]
 gi|333002986|gb|EGK22540.1| arginyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333004491|gb|EGK24020.1| arginyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333017865|gb|EGK37171.1| arginyl-tRNA synthetase [Shigella flexneri K-227]
 gi|335575182|gb|EGM61478.1| arginyl-tRNA synthetase [Shigella flexneri J1713]
 gi|391249606|gb|EIQ08834.1| arginyl-tRNA synthetase [Shigella flexneri 2850-71]
 gi|391252676|gb|EIQ11868.1| arginyl-tRNA synthetase [Shigella flexneri K-1770]
          Length = 577

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|254361175|ref|ZP_04977319.1| arginine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|452743770|ref|ZP_21943629.1| arginyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
 gi|153092666|gb|EDN73715.1| arginine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|452088158|gb|EME04522.1| arginyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
          Length = 575

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 236/570 (41%), Positives = 332/570 (58%), Gaps = 47/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILE--------NADLNGIADKLEIAGPG 81

Query: 573  FVNVFLSRVYAGE------QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL+  +  E      Q  +  +    P T      +++D+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLNPEWLAENTNSSLQAVNFGIKTANPQT------IVIDYSSPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD + R L +LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+
Sbjct: 136  TIIGDAVVRTLAFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
             +K+ +D DE F ++A   VV LQ  D      W+ + D++    Q+ Y+RLNVTLTE+ 
Sbjct: 195  AAKEHYDSDEAFAEKARNYVVKLQSGDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKD 254

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   + ++V  L+ KGL   DDG  +++ +   ++   PM ++  K DGGF Y 
Sbjct: 255  VMGESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+AA + R E  KAD  +  +D  Q  H +      +KAG + P+   ++   FG++L
Sbjct: 315  TTDIAAAKYRYETLKADRALVFSDSRQAQHMQQAWLITRKAGYV-PDSFSLEHPFFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTRSG TVKL +LLDE + R+ DKL  + R TELT  E +   +AVA G +KY
Sbjct: 374  GKDGKPFKTRSGGTVKLKDLLDEAVERA-DKLIAE-RSTELTAEEKAAVVEAVAIGSVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            +DLS NR  DYVF +D ML   GNTA Y+ YAYTRI SI   A I+   L     S  + 
Sbjct: 432  SDLSKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFARANIDENAL-----SGSIQ 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L   KE ALA  LL+  + L  V ++   H LC+YLY+++ +FS FY+ C  +  +    
Sbjct: 487  LNEPKERALAVKLLQFEEALNGVAKEGMPHILCQYLYELAGSFSSFYEACPILNAE---- 542

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             +T    RL LA  TAK +K+  D+L I+T
Sbjct: 543  -ETTKNSRLKLAALTAKTLKQGLDLLGIKT 571



 Score =  236 bits (601), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 193/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35  EFGDYQANGAMGAAKKLG-----MNPREFAQKILE--------NADLNGIADKLEIAGPG 81

Query: 183 FVNVFLSRVYAGE------QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL+  +  E      Q  +  +    P T      +++D+SSPN+AKEMHVGHLRS
Sbjct: 82  FINIFLNPEWLAENTNSSLQAVNFGIKTANPQT------IVIDYSSPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD + R L +LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+
Sbjct: 136 TIIGDAVVRTLAFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
            +K+ +D DE F ++A   VV LQ  D      W+ + D++    Q+ Y+RLNVTLTE+ 
Sbjct: 195 AAKEHYDSDEAFAEKARNYVVKLQSGDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKD 254

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   + ++V  L+ KGL   DDG  +++ +   ++   PM ++  K DGGF Y 
Sbjct: 255 VMGESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+AA + R E  KAD  +  +D R    + QA
Sbjct: 315 TTDIAAAKYRYETLKADRALVFSDSRQAQHMQQA 348



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 192/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N  L  + DK+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILE--------NADLNGIADKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGE------QIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL+  +  E      Q  +  +    P T      +++D+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLNPEWLAENTNSSLQAVNFGIKTANPQT------IVIDYSSPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD + R L +LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+
Sbjct: 136  TIIGDAVVRTLAFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
             +K+ +D DE F ++A   VV LQ  D      W+ + D++    Q+ Y+RLNVTLTE+ 
Sbjct: 195  AAKEHYDSDEAFAEKARNYVVKLQSGDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKD 254

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   + ++V  L+ KGL   DDG  +++ +   ++   PM ++  K DGGF Y 
Sbjct: 255  VMGESLYNPMLPEIVADLKAKGLAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+AA + R E  KAD  +  +D R    + Q
Sbjct: 315  TTDIAAAKYRYETLKADRALVFSDSRQAQHMQQ 347


>gi|419289783|ref|ZP_13831877.1| arginyl-tRNA synthetase [Escherichia coli DEC11A]
 gi|378130925|gb|EHW92286.1| arginyl-tRNA synthetase [Escherichia coli DEC11A]
          Length = 577

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   R+ LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRMKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQ 347


>gi|119773583|ref|YP_926323.1| arginyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166232838|sp|A1S2P7.1|SYR_SHEAM RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|119766083|gb|ABL98653.1| arginyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 581

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/563 (41%), Positives = 331/563 (58%), Gaps = 35/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K+       K P ++AQ I       +   P+ A+V  K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKPPREMAQLI-------IDNLPASAQVA-KVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F+       Q+K  + + +          V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDNALANQLKAALGDAMLGVKAAAPQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 693
            R LE+LGH V+R NHVGDWGTQFGML+A++++       K+   ++DL++FY+ +K RFD
Sbjct: 148  RALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQGDDKANLELSDLESFYRAAKLRFD 207

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            E + F  RA Q VV LQ  D    K W    D+S      +Y RL V+LT +   GES Y
Sbjct: 208  ESDEFATRARQLVVELQSGDAYCNKLWREFNDISLSHCHDVYARLGVSLTRKDVHGESAY 267

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 805
               + Q+V  L+ KGLL + DG K+++ E     D   +P+ I K+DGGF Y T+DLAA+
Sbjct: 268  NADLAQVVADLDAKGLLAISDGAKVVFQEEFRNKDGEPLPVIIQKADGGFLYATTDLAAM 327

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R     AD ++Y  DL Q +HF+ +   A+ AG +  N T ++ +GFG + GED + F
Sbjct: 328  RYRSGVLNADRVLYFVDLRQALHFQQVFSLARTAGFVRDNMT-LEHMGFGTMNGEDGRPF 386

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSG  VKL +LLDE + R+   ++ KN   ++  TE+ E  + V    +KYADLS NR
Sbjct: 387  KTRSGGVVKLVDLLDEAVERAEQLVRSKN--PDMDETEVKEIARVVGIASVKYADLSKNR 444

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
            + DY+FSF++ML   GNTA YLLYAYTR+A I + A    E++ +   +  + L+H+KE 
Sbjct: 445  SSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKKA----ENIDLT--NAELVLDHDKEK 498

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             L   L +  ++L  +      H LC YLY+++ AFS FY+ C  +  D+E    T    
Sbjct: 499  ELGNKLAQFGEILARMVDKGQPHILCGYLYELAGAFSSFYEACPVLSADSE----TARDS 554

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RLLL+  TA  +K+   +L I T
Sbjct: 555  RLLLSRLTADTLKQGLSLLGIET 577



 Score =  233 bits (594), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 187/319 (58%), Gaps = 22/319 (6%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K+       K P ++AQ I       +   P+ A+V  K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTKV-----AGKPPREMAQLI-------IDNLPASAQVA-KVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F+       Q+K  + + +          V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88  NFFIDDNALANQLKAALGDAMLGVKAAAPQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 303
           R LE+LGH V+R NHVGDWGTQFGML+A++++       K+   ++DL++FY+ +K RFD
Sbjct: 148 RALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQGDDKANLELSDLESFYRAAKLRFD 207

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           E + F  RA Q VV LQ  D    K W    D+S      +Y RL V+LT +   GES Y
Sbjct: 208 ESDEFATRARQLVVELQSGDAYCNKLWREFNDISLSHCHDVYARLGVSLTRKDVHGESAY 267

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 415
              + Q+V  L+ KGLL + DG K+++ E     D   +P+ I K+DGGF Y T+DLAA+
Sbjct: 268 NADLAQVVADLDAKGLLAISDGAKVVFQEEFRNKDGEPLPVIIQKADGGFLYATTDLAAM 327

Query: 416 RQRIEEEKADWIVYVTDHR 434
           R R     AD ++Y  D R
Sbjct: 328 RYRSGVLNADRVLYFVDLR 346



 Score =  233 bits (594), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 187/319 (58%), Gaps = 22/319 (6%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K+       K P ++AQ I       +   P+ A+V  K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKPPREMAQLI-------IDNLPASAQVA-KVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F+       Q+K  + + +          V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDNALANQLKAALGDAMLGVKAAAPQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 1320
            R LE+LGH V+R NHVGDWGTQFGML+A++++       K+   ++DL++FY+ +K RFD
Sbjct: 148  RALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQGDDKANLELSDLESFYRAAKLRFD 207

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            E + F  RA Q VV LQ  D    K W    D+S      +Y RL V+LT +   GES Y
Sbjct: 208  ESDEFATRARQLVVELQSGDAYCNKLWREFNDISLSHCHDVYARLGVSLTRKDVHGESAY 267

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 1432
               + Q+V  L+ KGLL + DG K+++ E     D   +P+ I K+DGGF Y T+DLAA+
Sbjct: 268  NADLAQVVADLDAKGLLAISDGAKVVFQEEFRNKDGEPLPVIIQKADGGFLYATTDLAAM 327

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R     AD ++Y  D R
Sbjct: 328  RYRSGVLNADRVLYFVDLR 346


>gi|387889636|ref|YP_006319934.1| arginine tRNA synthetase [Escherichia blattae DSM 4481]
 gi|414593085|ref|ZP_11442733.1| arginyl-tRNA synthetase [Escherichia blattae NBRC 105725]
 gi|386924469|gb|AFJ47423.1| arginine tRNA synthetase [Escherichia blattae DSM 4481]
 gi|403195918|dbj|GAB80385.1| arginyl-tRNA synthetase [Escherichia blattae NBRC 105725]
          Length = 577

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/567 (40%), Positives = 330/567 (58%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + +        +  L+ +  K EVA PG
Sbjct: 35   QFGDYQANGVMAIAKKLG-----MPPRQLAEQVIN--------HLDLSGIASKTEVAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPP---TLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    I D  V G +     T N +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLARNI-DEAVKGDRAGIAVTANPQ-TIVVDYSAPNVAKEMHVGHLRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NH+GDWGTQFGMLIA+L+ +  +  +    ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHLGDWGTQFGMLIAYLEKQQQEN-SGDMGLSDLEGFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F  RA   VV LQ  D   +K W M+ D++ +  Q  Y RLNVTLTE    G
Sbjct: 199  KAYDEDEAFALRARSYVVKLQGGDEYCRKMWRMLVDITMKQNQATYQRLNVTLTEDDIMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 259  ESLYNPMLPGIVADLKAKGLATESEGATVVYLDEFKNKEGDPMGVIVQKKDGGYLYTTTD 318

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E+  AD ++Y  D  Q  H  +     +KAG + P    M+   FG++LG+D
Sbjct: 319  IACAKYRYEKLHADRMLYYIDSRQHQHLMMAWTIVRKAGYV-PESIPMEHHMFGMMLGKD 377

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 378  GKPFKTRAGGTVKLSDLLDEALERAQRLVAEKN--PDMDAAELKKLANAVGIGAVKYADL 435

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AG++   L     + PVS+  
Sbjct: 436  SKSRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGVDESSL-----TAPVSISD 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  +++    T
Sbjct: 491  DREALLAARLLQFEETLAVVARDGTPHVMCAYLYDLAGLFSSFYEHCPILSAESD----T 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K   D L I T
Sbjct: 547  VRQSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  230 bits (587), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 193/331 (58%), Gaps = 27/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + +        +  L+ +  K EVA PG
Sbjct: 35  QFGDYQANGVMAIAKKLG-----MPPRQLAEQVIN--------HLDLSGIASKTEVAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPP---TLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    I D  V G +     T N +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLARNI-DEAVKGDRAGIAVTANPQ-TIVVDYSAPNVAKEMHVGHLRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NH+GDWGTQFGMLIA+L+ +  +  +    ++DL+ FY+E+K
Sbjct: 140 GDASVRTLEFLGHKVIRANHLGDWGTQFGMLIAYLEKQQQEN-SGDMGLSDLEGFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F  RA   VV LQ  D   +K W M+ D++ +  Q  Y RLNVTLTE    G
Sbjct: 199 KAYDEDEAFALRARSYVVKLQGGDEYCRKMWRMLVDITMKQNQATYQRLNVTLTEDDIMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 259 ESLYNPMLPGIVADLKAKGLATESEGATVVYLDEFKNKEGDPMGVIVQKKDGGYLYTTTD 318

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E+  AD ++Y  D R +  ++ A
Sbjct: 319 IACAKYRYEKLHADRMLYYIDSRQHQHLMMA 349



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/329 (39%), Positives = 192/329 (58%), Gaps = 27/329 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + +        +  L+ +  K EVA PG
Sbjct: 35   QFGDYQANGVMAIAKKLG-----MPPRQLAEQVIN--------HLDLSGIASKTEVAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPP---TLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    I D  V G +     T N +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLARNI-DEAVKGDRAGIAVTANPQ-TIVVDYSAPNVAKEMHVGHLRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NH+GDWGTQFGMLIA+L+ +  +  +    ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHLGDWGTQFGMLIAYLEKQQQEN-SGDMGLSDLEGFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F  RA   VV LQ  D   +K W M+ D++ +  Q  Y RLNVTLTE    G
Sbjct: 199  KAYDEDEAFALRARSYVVKLQGGDEYCRKMWRMLVDITMKQNQATYQRLNVTLTEDDIMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 259  ESLYNPMLPGIVADLKAKGLATESEGATVVYLDEFKNKEGDPMGVIVQKKDGGYLYTTTD 318

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVL 1457
            +A  + R E+  AD ++Y  D R +  ++
Sbjct: 319  IACAKYRYEKLHADRMLYYIDSRQHQHLM 347


>gi|194429348|ref|ZP_03061874.1| arginyl-tRNA synthetase [Escherichia coli B171]
 gi|419316960|ref|ZP_13858772.1| arginyl-tRNA synthetase [Escherichia coli DEC12A]
 gi|419323112|ref|ZP_13864816.1| arginyl-tRNA synthetase [Escherichia coli DEC12B]
 gi|419329113|ref|ZP_13870726.1| arginyl-tRNA synthetase [Escherichia coli DEC12C]
 gi|419334679|ref|ZP_13876218.1| arginyl-tRNA synthetase [Escherichia coli DEC12D]
 gi|419340137|ref|ZP_13881612.1| arginyl-tRNA synthetase [Escherichia coli DEC12E]
 gi|194412655|gb|EDX28951.1| arginyl-tRNA synthetase [Escherichia coli B171]
 gi|378167218|gb|EHX28133.1| arginyl-tRNA synthetase [Escherichia coli DEC12B]
 gi|378170945|gb|EHX31820.1| arginyl-tRNA synthetase [Escherichia coli DEC12A]
 gi|378171678|gb|EHX32541.1| arginyl-tRNA synthetase [Escherichia coli DEC12C]
 gi|378184041|gb|EHX44679.1| arginyl-tRNA synthetase [Escherichia coli DEC12D]
 gi|378190059|gb|EHX50645.1| arginyl-tRNA synthetase [Escherichia coli DEC12E]
          Length = 577

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDETLERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQ 347


>gi|170024389|ref|YP_001720894.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|238688454|sp|B1JLM2.1|SYR_YERPY RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|169750923|gb|ACA68441.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 576

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/611 (38%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVTPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +   AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAVERAGKLIAEKN--PDMPADELKQVINAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ R AG++   L     + P+ +  ++E ALA  LL+  ++
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFRRAGVDESSL-----TLPLVITEDREAALATRLLQFEEI 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESE----EIRQSRLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIQT 572



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 207/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53  -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104 KLGVTPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217 LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277 LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 206/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVTPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|417341144|ref|ZP_12122294.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Baildon str. R6-199]
 gi|357958252|gb|EHJ82944.1| Arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Baildon str. R6-199]
          Length = 567

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 25   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 71

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 72   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 128

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 129  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 187

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 188  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 247

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 248  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 307

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 308  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 366

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 367  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 424

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 425  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 480

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 481  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 536

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 537  --VRNSRLKLAQLTAKTLKLGLDTLGIET 563



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 25  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 71

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 72  FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 128

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 129 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 187

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 188 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 247

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 248 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 307

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 308 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 338



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 25   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 71

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 72   FINIFLEPAFLAEQVQQALASDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 128

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 129  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 187

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 188  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 247

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 248  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 307

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 308  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 337


>gi|119943800|ref|YP_941480.1| arginyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166232827|sp|A1SQW6.1|SYR_PSYIN RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|119862404|gb|ABM01881.1| arginyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 582

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 238/571 (41%), Positives = 331/571 (57%), Gaps = 50/571 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD+  N A+ L K       K+NP  +A+ I       +A  P    VI K+E+A PGF+
Sbjct: 41   GDYANNLALMLAK-----PAKQNPRHLAELI-------IANIPESTLVI-KMEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-----VLVDFSSPNIAKEMHVGHLRSTII 629
            N F++  +  +QI    ++      LN ++      +++D+SSPN+AKEMHVGHLRS+II
Sbjct: 88   NFFINPNFLEKQIDGAYLD----KRLNVQIEANPQTIVIDYSSPNLAKEMHVGHLRSSII 143

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI----ADLQAFY 685
            GD ++R LE+ G++VVR NHVGDWGTQFGML+A+++    +   K  PI    A+L+ FY
Sbjct: 144  GDAVARTLEFKGNNVVRQNHVGDWGTQFGMLLAYME----ELRAKGEPIENNLANLEIFY 199

Query: 686  KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 744
            + +K RFDE E F  RA   VV LQ  + D  K W    + S    Q+ Y RL V+LT  
Sbjct: 200  RAAKGRFDESEDFATRARHLVVKLQGGNKDCLKLWAKFNETSLSHCQETYQRLGVSLTRA 259

Query: 745  --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 797
              RGES Y   +  +V  L+K+GLL+   G K ++      ++   +P+ I K DGGF Y
Sbjct: 260  DVRGESSYNDQLAVVVEDLDKQGLLQQSQGAKCVFLDNFKNKEGDPLPVIIQKKDGGFLY 319

Query: 798  DTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
             TSDLAA+R R  E  AD I+Y  D  QG+HF+ + E A+ AG +N  KT ++ + FG V
Sbjct: 320  ATSDLAAMRYRQNELNADRILYFVDARQGLHFQQVFEVARSAGFVN-EKTSLEHMPFGTV 378

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIK 917
            +GED + FKTRSG   KL++LL E   R+ + +K+KN+  E++  EL      V    +K
Sbjct: 379  MGEDGRPFKTRSGAVAKLADLLTEAEVRAYELVKEKNK--EMSEPELRHIASVVGISSVK 436

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
            YADLS NR  DY FSFD ML   GNTA YLLYAYTR+ SI   AGI      + + +  V
Sbjct: 437  YADLSKNRTSDYTFSFDSMLSFEGNTAPYLLYAYTRVVSIFNKAGI-----EMGSVTAAV 491

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1037
            SL  EKE  LA  L++ ND++  V +    H LC YL++++  FS FY+ C  +  + E 
Sbjct: 492  SLTQEKEIDLANKLIQFNDIIDQVAKQGMPHFLCSYLFELAGLFSSFYEACPILIAETE- 550

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               T    RL LA  TAK +K+   +L I T
Sbjct: 551  ---TQKQSRLKLAGLTAKTLKQGLSLLGINT 578



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/409 (36%), Positives = 220/409 (53%), Gaps = 45/409 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD+  N A+ L K       K+NP  +A+ I       +A  P    VI K+E+A PGF+
Sbjct: 41  GDYANNLALMLAK-----PAKQNPRHLAELI-------IANIPESTLVI-KMEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-----VLVDFSSPNIAKEMHVGHLRSTII 239
           N F++  +  +QI    ++      LN ++      +++D+SSPN+AKEMHVGHLRS+II
Sbjct: 88  NFFINPNFLEKQIDGAYLD----KRLNVQIEANPQTIVIDYSSPNLAKEMHVGHLRSSII 143

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI----ADLQAFY 295
           GD ++R LE+ G++VVR NHVGDWGTQFGML+A+++    +   K  PI    A+L+ FY
Sbjct: 144 GDAVARTLEFKGNNVVRQNHVGDWGTQFGMLLAYME----ELRAKGEPIENNLANLEIFY 199

Query: 296 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 354
           + +K RFDE E F  RA   VV LQ  + D  K W    + S    Q+ Y RL V+LT  
Sbjct: 200 RAAKGRFDESEDFATRARHLVVKLQGGNKDCLKLWAKFNETSLSHCQETYQRLGVSLTRA 259

Query: 355 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 407
             RGES Y   +  +V  L+K+GLL+   G K ++      ++   +P+ I K DGGF Y
Sbjct: 260 DVRGESSYNDQLAVVVEDLDKQGLLQQSQGAKCVFLDNFKNKEGDPLPVIIQKKDGGFLY 319

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTDHR-SYHQVLQAIAEEEKKQGISSSSSSQTK---GT 463
            TSDLAA+R R  E  AD I+Y  D R   H   Q + E  +  G  +  +S      GT
Sbjct: 320 ATSDLAAMRYRQNELNADRILYFVDARQGLH--FQQVFEVARSAGFVNEKTSLEHMPFGT 377

Query: 464 AKKMN-VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 511
               +  P + R      L+D+ T A   A+  + +K   ++    +++
Sbjct: 378 VMGEDGRPFKTRSGAVAKLADLLTEAEVRAYELVKEKNKEMSEPELRHI 426



 Score =  221 bits (563), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 193/337 (57%), Gaps = 41/337 (12%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD+  N A+ L K       K+NP  +A+ I       +A  P    VI K+E+A PGF+
Sbjct: 41   GDYANNLALMLAK-----PAKQNPRHLAELI-------IANIPESTLVI-KMEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-----VLVDFSSPNIAKEMHVGHLRSTII 1256
            N F++  +  +QI    ++      LN ++      +++D+SSPN+AKEMHVGHLRS+II
Sbjct: 88   NFFINPNFLEKQIDGAYLD----KRLNVQIEANPQTIVIDYSSPNLAKEMHVGHLRSSII 143

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI----ADLQAFY 1312
            GD ++R LE+ G++VVR NHVGDWGTQFGML+A+++    +   K  PI    A+L+ FY
Sbjct: 144  GDAVARTLEFKGNNVVRQNHVGDWGTQFGMLLAYME----ELRAKGEPIENNLANLEIFY 199

Query: 1313 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 1371
            + +K RFDE E F  RA   VV LQ  + D  K W    + S    Q+ Y RL V+LT  
Sbjct: 200  RAAKGRFDESEDFATRARHLVVKLQGGNKDCLKLWAKFNETSLSHCQETYQRLGVSLTRA 259

Query: 1372 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 1424
              RGES Y   +  +V  L+K+GLL+   G K ++      ++   +P+ I K DGGF Y
Sbjct: 260  DVRGESSYNDQLAVVVEDLDKQGLLQQSQGAKCVFLDNFKNKEGDPLPVIIQKKDGGFLY 319

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
             TSDLAA+R R  E  AD I+Y  D R    + QV +
Sbjct: 320  ATSDLAAMRYRQNELNADRILYFVDARQGLHFQQVFE 356


>gi|183598986|ref|ZP_02960479.1| hypothetical protein PROSTU_02431 [Providencia stuartii ATCC 25827]
 gi|188021202|gb|EDU59242.1| arginine--tRNA ligase [Providencia stuartii ATCC 25827]
          Length = 576

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 340/602 (56%), Gaps = 38/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+Q A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP  +A+ I S        +  L  +  K+E+A PGF+N+FL   +   Q++  +   
Sbjct: 53   -INPRQLAEQIVS--------HLDLEGIASKVEIAGPGFINIFLEPSWLTTQVEQALTCD 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                +  K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVGDWG
Sbjct: 104  RLGLSSVKSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+ K  +       +ADL+ FY+E+K+ +D DE+F +RA   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNENASDMALADLEEFYREAKQHYDSDEVFAERARGYVVKLQSGDE 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 771
              +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL    +
Sbjct: 223  YCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNDMLPGIVADLKAKGLAVESE 282

Query: 772  GRKIMWGED---RGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G  +++ ++   +   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D  Q 
Sbjct: 283  GATVVYLDEFKTKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRALYYIDSRQH 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H        +KAG + P    ++   FG++LG+D K FKTRSG TV+LS+LLDE + R+
Sbjct: 343  QHLMQAWTIVRKAGYI-PESMSLEHHMFGMMLGKDGKPFKTRSGGTVRLSDLLDEAIERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               ++ KN   ++   EL+     V  G +KYADLS +R  DY+F +D ML   GNTA Y
Sbjct: 402  QVLIRSKN--PDMPEDELNNVANVVGIGSVKYADLSKSRTTDYIFDWDNMLAFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTR+ASI + A +   DL     + P+ L+  +E ALA  L++  + +++V RD  
Sbjct: 460  MQYAYTRVASIFKKANVTQADL-----TLPIVLQDPREIALATRLMQFEETILMVARDGT 514

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H +C YLYD++  FS FY++C  +  + E + ++    RL LA  T K +K   D L I
Sbjct: 515  PHVMCAYLYDLAGLFSSFYEHCPILSAEDEAQRQS----RLKLALLTQKTLKAGLDTLGI 570

Query: 1067 RT 1068
             T
Sbjct: 571  DT 572



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 206/366 (56%), Gaps = 26/366 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+Q A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP  +A+ I S        +  L  +  K+E+A PGF+N+FL   +   Q++  +   
Sbjct: 53  -INPRQLAEQIVS--------HLDLEGIASKVEIAGPGFINIFLEPSWLTTQVEQALTCD 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
               +  K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVGDWG
Sbjct: 104 RLGLSSVKSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+ K  +       +ADL+ FY+E+K+ +D DE+F +RA   VV LQ  D 
Sbjct: 164 TQFGMLIAYLE-KMQNENASDMALADLEEFYREAKQHYDSDEVFAERARGYVVKLQSGDE 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 381
             +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL    +
Sbjct: 223 YCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNDMLPGIVADLKAKGLAVESE 282

Query: 382 GRKIMWGED---RGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G  +++ ++   +   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D R +
Sbjct: 283 GATVVYLDEFKTKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRALYYIDSRQH 342

Query: 437 HQVLQA 442
             ++QA
Sbjct: 343 QHLMQA 348



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/365 (37%), Positives = 205/365 (56%), Gaps = 26/365 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+Q A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP  +A+ I S        +  L  +  K+E+A PGF+N+FL   +   Q++  +   
Sbjct: 53   -INPRQLAEQIVS--------HLDLEGIASKVEIAGPGFINIFLEPSWLTTQVEQALTCD 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                +  K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVGDWG
Sbjct: 104  RLGLSSVKSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+ K  +       +ADL+ FY+E+K+ +D DE+F +RA   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNENASDMALADLEEFYREAKQHYDSDEVFAERARGYVVKLQSGDE 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 1398
              +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL    +
Sbjct: 223  YCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNDMLPGIVADLKAKGLAVESE 282

Query: 1399 GRKIMWGED---RGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G  +++ ++   +   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D R +
Sbjct: 283  GATVVYLDEFKTKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRALYYIDSRQH 342

Query: 1454 HQVLQ 1458
              ++Q
Sbjct: 343  QHLMQ 347


>gi|161511522|ref|NP_872860.2| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 575

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 245/608 (40%), Positives = 350/608 (57%), Gaps = 51/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+ +A  E   +     S+  +    FGD+Q N AMA  K       
Sbjct: 1    MNIQQILSDKIKQAMMIAGAEANVEPLVRQSSKPE----FGDYQANGAMAAAKK-----L 51

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 588
              NP + AQ I          N  ++ ++DK+E+A PGF+N+FL   +  +Q        
Sbjct: 52   AMNPREFAQKILD--------NLDVSDMVDKLEIAGPGFINIFLKPSWLAKQANFALQAV 103

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
            +  +   QP T      +L+D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG++V+R N
Sbjct: 104  NFGIKTAQPQT------ILIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D+IF ++A   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMENEQASEMQLSDLEAFYRAAKESYDSDQIFAEKARNYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L   D+G  +++ +   ++   PM ++  KSDGGF Y T+D+AA + R E  K D  +  
Sbjct: 277  LAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYTTTDIAAAKYRYETLKVDRALVF 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
            +D  Q  H +      +KAG + P    ++   FG++LG+D K FKTRSG TVKL +LLD
Sbjct: 337  SDSRQAQHMQQAWLITRKAGYV-PASFSLEHPFFGMMLGKDGKPFKTRSGGTVKLKDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+ DKL    R T LT  E S   +AVA G +KY+DLS NR  DYVF +D ML   
Sbjct: 396  EAVERA-DKLISA-RSTNLTVAEKSAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNMLTFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTRI SI   A I+ + L     +  + L  EKE  LA  LL+  + L  
Sbjct: 454  GNTAPYMQYAYTRIRSIFARAEIDPDTL-----TGEMQLTEEKERTLALKLLQFEEALTA 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V ++   H LC+YLY+++  FS FY+ C  +  D     + +   RL LA  TAK +K+ 
Sbjct: 509  VAKEGMPHILCQYLYELAGIFSSFYEACPMLNAD-----EAIKHSRLRLASLTAKTLKQG 563

Query: 1061 FDILNIRT 1068
             D+L I+T
Sbjct: 564  LDLLGIKT 571



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 160/440 (36%), Positives = 237/440 (53%), Gaps = 46/440 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+ +A  E   +     S+  +    FGD+Q N AMA  K       
Sbjct: 1   MNIQQILSDKIKQAMMIAGAEANVEPLVRQSSKPE----FGDYQANGAMAAAKK-----L 51

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 198
             NP + AQ I          N  ++ ++DK+E+A PGF+N+FL   +  +Q        
Sbjct: 52  AMNPREFAQKILD--------NLDVSDMVDKLEIAGPGFINIFLKPSWLAKQANFALQAV 103

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
           +  +   QP T      +L+D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG++V+R N
Sbjct: 104 NFGIKTAQPQT------ILIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D+IF ++A   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMENEQASEMQLSDLEAFYRAAKESYDSDQIFAEKARNYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   GES Y   + ++V  L+ KG
Sbjct: 217 LQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L   D+G  +++ +   ++   PM ++  KSDGGF Y T+D+AA + R E  K D  +  
Sbjct: 277 LAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYTTTDIAAAKYRYETLKVDRALVF 336

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTH 487
           +D R    + QA     K   + +S S +       +     P + R      L D+   
Sbjct: 337 SDSRQAQHMQQAWLITRKAGYVPASFSLEHPFFGMMLGKDGKPFKTRSGGTVKLKDLLDE 396

Query: 488 AVQVAFPELGDKTASVASTN 507
           AV+ A     DK  S  STN
Sbjct: 397 AVERA-----DKLISARSTN 411



 Score =  236 bits (603), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 143/371 (38%), Positives = 213/371 (57%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+ +A  E   +     S+  +    FGD+Q N AMA  K       
Sbjct: 1    MNIQQILSDKIKQAMMIAGAEANVEPLVRQSSKPE----FGDYQANGAMAAAKK-----L 51

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 1215
              NP + AQ I          N  ++ ++DK+E+A PGF+N+FL   +  +Q        
Sbjct: 52   AMNPREFAQKILD--------NLDVSDMVDKLEIAGPGFINIFLKPSWLAKQANFALQAV 103

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
            +  +   QP T      +L+D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG++V+R N
Sbjct: 104  NFGIKTAQPQT------ILIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +K+ +D D+IF ++A   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMENEQASEMQLSDLEAFYRAAKESYDSDQIFAEKARNYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L   D+G  +++ +   ++   PM ++  KSDGGF Y T+D+AA + R E  K D  +  
Sbjct: 277  LAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYTTTDIAAAKYRYETLKVDRALVF 336

Query: 1448 TDHRSYHQVLQ 1458
            +D R    + Q
Sbjct: 337  SDSRQAQHMQQ 347


>gi|186895396|ref|YP_001872508.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|238691368|sp|B2K312.1|SYR_YERPB RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|186698422|gb|ACC89051.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 576

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/611 (38%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +   AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAVERAGKLIAEKN--PDMPADELKQVINAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ R AG++   L     + P+ +  ++E ALA  LL+  ++
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFRRAGVDETSL-----TLPLVITEDREAALATRLLQFEEI 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDVAGLFSSFYEHCQILNAESE----EIRQSRLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIQT 572



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 207/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53  -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217 LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277 LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 206/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|432850863|ref|ZP_20081558.1| arginyl-tRNA synthetase [Escherichia coli KTE144]
 gi|431400185|gb|ELG83567.1| arginyl-tRNA synthetase [Escherichia coli KTE144]
          Length = 577

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 326/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  ++L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEEILTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|333894009|ref|YP_004467884.1| arginyl-tRNA synthetase [Alteromonas sp. SN2]
 gi|332994027|gb|AEF04082.1| arginyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 576

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 337/564 (59%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FG++Q N AMAL K  + K     P DIA+ I  +V         L  V  K+EVA PG
Sbjct: 34   EFGEYQFNGAMALAKQLRQK-----PRDIAEKIVEIV--------KLDDVASKLEVAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+NV L+  +   Q +  + +       + +  V+VD+SSPN+AKEMHVGHLR+TIIGD 
Sbjct: 81   FINVHLNNEWLANQCELALHDPRIGVAKSPEQTVVVDYSSPNLAKEMHVGHLRTTIIGDA 140

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + ++LE+LGH V+R NH+GDWGTQFGML+AHL DK    + ++  ++DL+ FY+E+K RF
Sbjct: 141  VVKVLEFLGHKVIRQNHMGDWGTQFGMLLAHLSDKLEQEVAET-ALSDLEDFYREAKVRF 199

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            D++E F  RA + VV LQ  D      WE   DVS    + +Y +LNV+LT     GES 
Sbjct: 200  DDEEGFADRAREYVVKLQGGDEKCLSLWEKFIDVSIAHSEDVYKKLNVSLTRADIMGESA 259

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAA 804
            Y   +  ++  L++KG+   D G ++++     +  G+  + IV KS GG+ Y T+DLAA
Sbjct: 260  YNHDLANVISELKEKGIAVEDQGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAA 319

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +R R     AD  + +TD  Q +HF+  E   +KAG +   +T  +   FG++LG D K 
Sbjct: 320  MRYRSGTLNADRTLILTDARQALHFKQTEIVGRKAGFMEEAQT-YEHCPFGMMLGSDGKP 378

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TVKL ELLDE + R+   + +  R  +L+  EL+E  + V  G +KYADLS N
Sbjct: 379  FKTRTGGTVKLVELLDEAVERAGKLIAE--RDNDLSADELAEVARKVGIGAVKYADLSKN 436

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F++D ML   GNTA YL YAYTR+ S+ R AG+  E + V      +++  ++E
Sbjct: 437  RTTDYMFNWDTMLSFEGNTAPYLQYAYTRVKSLFRKAGVAIETMPV-----DINIVEKQE 491

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL+  LL+  +V+ LV+RD   H LC YLY++++AF  FY+ C  ++   E K++    
Sbjct: 492  HALSVLLLQFEEVVGLVSRDATPHVLCTYLYELASAFMSFYEACPMLKDGIELKVR---D 548

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL L+   A  + +  ++L I T
Sbjct: 549  SRLALSALVASTLSQGLNLLGIET 572



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 22/320 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FG++Q N AMAL K  + K     P DIA+ I  +V         L  V  K+EVA PG
Sbjct: 34  EFGEYQFNGAMALAKQLRQK-----PRDIAEKIVEIV--------KLDDVASKLEVAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+NV L+  +   Q +  + +       + +  V+VD+SSPN+AKEMHVGHLR+TIIGD 
Sbjct: 81  FINVHLNNEWLANQCELALHDPRIGVAKSPEQTVVVDYSSPNLAKEMHVGHLRTTIIGDA 140

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + ++LE+LGH V+R NH+GDWGTQFGML+AHL DK    + ++  ++DL+ FY+E+K RF
Sbjct: 141 VVKVLEFLGHKVIRQNHMGDWGTQFGMLLAHLSDKLEQEVAET-ALSDLEDFYREAKVRF 199

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           D++E F  RA + VV LQ  D      WE   DVS    + +Y +LNV+LT     GES 
Sbjct: 200 DDEEGFADRAREYVVKLQGGDEKCLSLWEKFIDVSIAHSEDVYKKLNVSLTRADIMGESA 259

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAA 414
           Y   +  ++  L++KG+   D G ++++     +  G+  + IV KS GG+ Y T+DLAA
Sbjct: 260 YNHDLANVISELKEKGIAVEDQGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAA 319

Query: 415 IRQRIEEEKADWIVYVTDHR 434
           +R R     AD  + +TD R
Sbjct: 320 MRYRSGTLNADRTLILTDAR 339



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 22/320 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FG++Q N AMAL K  + K     P DIA+ I  +V         L  V  K+EVA PG
Sbjct: 34   EFGEYQFNGAMALAKQLRQK-----PRDIAEKIVEIV--------KLDDVASKLEVAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+NV L+  +   Q +  + +       + +  V+VD+SSPN+AKEMHVGHLR+TIIGD 
Sbjct: 81   FINVHLNNEWLANQCELALHDPRIGVAKSPEQTVVVDYSSPNLAKEMHVGHLRTTIIGDA 140

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + ++LE+LGH V+R NH+GDWGTQFGML+AHL DK    + ++  ++DL+ FY+E+K RF
Sbjct: 141  VVKVLEFLGHKVIRQNHMGDWGTQFGMLLAHLSDKLEQEVAET-ALSDLEDFYREAKVRF 199

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            D++E F  RA + VV LQ  D      WE   DVS    + +Y +LNV+LT     GES 
Sbjct: 200  DDEEGFADRAREYVVKLQGGDEKCLSLWEKFIDVSIAHSEDVYKKLNVSLTRADIMGESA 259

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAA 1431
            Y   +  ++  L++KG+   D G ++++     +  G+  + IV KS GG+ Y T+DLAA
Sbjct: 260  YNHDLANVISELKEKGIAVEDQGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAA 319

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
            +R R     AD  + +TD R
Sbjct: 320  MRYRSGTLNADRTLILTDAR 339


>gi|387769477|ref|ZP_10125740.1| arginine--tRNA ligase [Pasteurella bettyae CCUG 2042]
 gi|386906786|gb|EIJ71511.1| arginine--tRNA ligase [Pasteurella bettyae CCUG 2042]
          Length = 576

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/568 (39%), Positives = 340/568 (59%), Gaps = 42/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K        +NP + AQ + +        N  L+++ +K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----QNPREFAQKVLN--------NVDLSEIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL++ +  + + DI    +  P    K+     V++D+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLNKDWVAKNV-DI---ALAVPNFGIKVAHPQTVVIDYSSPNVAKEMHVGHLRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD ++R LE++G+ V+R NHVGDWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +
Sbjct: 138  IGDAVARALEFMGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHADAMELSDLEAFYRAA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            K+ +D DE F  +A   VV LQ  D   +  W+ + D++ +  Q+ YDRLNVTLTE+   
Sbjct: 197  KEHYDSDEAFAVKARSYVVKLQSGDTYCRTMWKKLVDMTMQQNQRNYDRLNVTLTEKDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTS 800
            GES Y   +  +V  L+K+GL   DDG  +++ +   ++   PM ++  K DGGF Y T+
Sbjct: 257  GESLYNPMLPGIVEDLKKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTT 316

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+AA + R     AD  +  +D  Q  H +      +KAG + P+   ++   FG++LG+
Sbjct: 317  DIAAAKYRYHTLHADRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFSLEHQNFGMMLGK 375

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D K FKTRSG TVKL++LLDE + R+   + +KN  T L+  E +E  +AVA G +KYAD
Sbjct: 376  DGKPFKTRSGGTVKLADLLDEAVERATLLINEKN--TALSEQEKAEVIEAVAIGSVKYAD 433

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  DYVF +D ML   GNTA Y+ YAYTRI SI     +++    VA     + + 
Sbjct: 434  LSKNRTTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFSKTDVDA----VALSKAKIQMT 489

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             +KE ALA  LL+  + + +V ++   H LC YLY+++  FS FY++C  +  +     +
Sbjct: 490  DDKERALAIKLLQFEEAVQIVAKEGTPHVLCTYLYELAGTFSSFYEHCPILNAE-----E 544

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            T+   RL LA+ T K +K+  D+L I+T
Sbjct: 545  TLKLSRLKLAQLTEKTLKQGLDLLGIKT 572



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/397 (35%), Positives = 223/397 (56%), Gaps = 33/397 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K        +NP + AQ + +        N  L+++ +K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----QNPREFAQKVLN--------NVDLSEIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL++ +  + + DI    +  P    K+     V++D+SSPN+AKEMHVGHLRSTI
Sbjct: 82  FINIFLNKDWVAKNV-DI---ALAVPNFGIKVAHPQTVVIDYSSPNVAKEMHVGHLRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD ++R LE++G+ V+R NHVGDWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +
Sbjct: 138 IGDAVARALEFMGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHADAMELSDLEAFYRAA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           K+ +D DE F  +A   VV LQ  D   +  W+ + D++ +  Q+ YDRLNVTLTE+   
Sbjct: 197 KEHYDSDEAFAVKARSYVVKLQSGDTYCRTMWKKLVDMTMQQNQRNYDRLNVTLTEKDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTS 410
           GES Y   +  +V  L+K+GL   DDG  +++ +   ++   PM ++  K DGGF Y T+
Sbjct: 257 GESLYNPMLPGIVEDLKKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTT 316

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM--- 467
           D+AA + R     AD  +  +D R    + QA     K   +  S S + +     +   
Sbjct: 317 DIAAAKYRYHTLHADRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHQNFGMMLGKD 376

Query: 468 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA 504
             P + R      L+D+   AV+ A   + +K  +++
Sbjct: 377 GKPFKTRSGGTVKLADLLDEAVERATLLINEKNTALS 413



 Score =  233 bits (593), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 130/331 (39%), Positives = 198/331 (59%), Gaps = 30/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K        +NP + AQ + +        N  L+++ +K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----QNPREFAQKVLN--------NVDLSEIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL++ +  + + DI    +  P    K+     V++D+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLNKDWVAKNV-DI---ALAVPNFGIKVAHPQTVVIDYSSPNVAKEMHVGHLRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD ++R LE++G+ V+R NHVGDWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +
Sbjct: 138  IGDAVARALEFMGNKVIRANHVGDWGTQFGMLIAYLE-KMENEHADAMELSDLEAFYRAA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            K+ +D DE F  +A   VV LQ  D   +  W+ + D++ +  Q+ YDRLNVTLTE+   
Sbjct: 197  KEHYDSDEAFAVKARSYVVKLQSGDTYCRTMWKKLVDMTMQQNQRNYDRLNVTLTEKDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTS 1427
            GES Y   +  +V  L+K+GL   DDG  +++ +   ++   PM ++  K DGGF Y T+
Sbjct: 257  GESLYNPMLPGIVEDLKKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTT 316

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+AA + R     AD  +  +D R    + Q
Sbjct: 317  DIAAAKYRYHTLHADRALVFSDTRQSQHMQQ 347


>gi|51596355|ref|YP_070546.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|81639440|sp|Q66AV1.1|SYR_YERPS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|51589637|emb|CAH21267.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
          Length = 576

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/611 (38%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +   AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAVERAGKLIAEKN--PDMPADELKQVINAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ R AG++   L     + P+ +  ++E ALA  LL+  ++
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFRRAGVDETSL-----TLPLVITEDREAALATRLLQFEEI 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESE----EIRQSRLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIQT 572



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 207/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53  -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217 LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277 LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 206/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|432372548|ref|ZP_19615593.1| arginyl-tRNA synthetase [Escherichia coli KTE11]
 gi|430897041|gb|ELC19268.1| arginyl-tRNA synthetase [Escherichia coli KTE11]
          Length = 577

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 326/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL  V+  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPVFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN + L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEDQLAAA----PVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 194/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL  V+  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPVFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 192/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL  V+  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPVFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|418942978|ref|ZP_13496212.1| arginyl-tRNA synthetase, partial [Escherichia coli O157:H43 str. T22]
 gi|375321707|gb|EHS67518.1| arginyl-tRNA synthetase, partial [Escherichia coli O157:H43 str. T22]
          Length = 555

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 13   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 59

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 60   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 116

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 117  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 175

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 176  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 235

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 236  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 292

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 293  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 351

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 352  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 409

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 410  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 465

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 466  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 523

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 524  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 551



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 13  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 59

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 60  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 116

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 117 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 175

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 176 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 235

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 236 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 292

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 293 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 328



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 13   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 59

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 60   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 116

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 117  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 175

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 176  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 235

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 236  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 292

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 293  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 325


>gi|284007623|emb|CBA73252.1| arginyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 576

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/612 (38%), Positives = 342/612 (55%), Gaps = 58/612 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF----K 530
            M+++  LS+  ++A+  A    G    S A        +FGD+Q N  M+  K      +
Sbjct: 1    MNIQALLSEKISNALVAA----GAPKGSDAHIRPSTKAQFGDYQANGVMSAAKKIGIPPR 56

Query: 531  DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK-- 588
               EK  P    ++IAS                 K+E+A PGF+N+FL + +  +QI+  
Sbjct: 57   QLAEKMLPLLKLENIAS-----------------KVEIAGPGFINIFLDKQWIAKQIELT 99

Query: 589  ----DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 644
                 + +N V P T      +++D+S+PN+AK+MHVGHLRSTIIGD ++R LE+LGH V
Sbjct: 100  LQHEKLAINSVTPQT------IIIDYSAPNVAKQMHVGHLRSTIIGDAVARTLEFLGHKV 153

Query: 645  VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 704
            +R NH+GDWGTQFGMLIA+L+ K       +  +ADL+ FY+E+KK +DEDE F + A  
Sbjct: 154  IRANHIGDWGTQFGMLIAYLE-KVQQENATNMALADLETFYREAKKHYDEDENFAELARN 212

Query: 705  CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYL 761
             VV LQ  D   +K W  + D++    Q+ Y RLNVTLTE    GES Y   +  +V  L
Sbjct: 213  YVVKLQSGDEYCRKMWHKLVDITMAQNQQTYQRLNVTLTEDDVMGESLYNNMLPDIVADL 272

Query: 762  EKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 816
              KGL    DG  +++      +D  ++ + I K DGG+ Y T+D+A  + R E   AD 
Sbjct: 273  TAKGLAVESDGAMVVYLDEFKNKDGDAMGVIIQKKDGGYLYTTTDIACAKYRHEILHADR 332

Query: 817  IVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLS 876
            ++Y TD  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T++L+
Sbjct: 333  VLYYTDSRQHQHLMQAWAIVRKAGYI-PDTMSLEHHMFGMMLGKDGKPFKTRAGGTIRLA 391

Query: 877  ELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKM 936
            +LLDE + R+   ++ KN  + +   EL    QAV  G +KYADLS NR  DY+F +D M
Sbjct: 392  DLLDEAIERAAHLIRQKN--SAMPEKELQSIIQAVGIGAVKYADLSKNRTTDYIFDWDNM 449

Query: 937  LDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMND 996
            L   GNTA Y+ YAYTR+ASI + A IN   L     + PV L +E E  LA  LL+  +
Sbjct: 450  LAFEGNTAPYMQYAYTRVASIFKRAKINPATL-----TAPVILANEYEQVLAIRLLQFEE 504

Query: 997  VLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
             ++ V R+   H +C YLYD++  FS FY++C  +  + +   ++    RL LA  T K 
Sbjct: 505  TILTVAREGLPHIMCSYLYDLAGLFSSFYEHCPILNAENDASKQS----RLKLALLTQKT 560

Query: 1057 MKKCFDILNIRT 1068
            +K   D L I T
Sbjct: 561  LKIGLDTLGIET 572



 Score =  243 bits (621), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 143/378 (37%), Positives = 210/378 (55%), Gaps = 46/378 (12%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF----K 140
           M+++  LS+  ++A+  A    G    S A        +FGD+Q N  M+  K      +
Sbjct: 1   MNIQALLSEKISNALVAA----GAPKGSDAHIRPSTKAQFGDYQANGVMSAAKKIGIPPR 56

Query: 141 DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK-- 198
              EK  P    ++IAS                 K+E+A PGF+N+FL + +  +QI+  
Sbjct: 57  QLAEKMLPLLKLENIAS-----------------KVEIAGPGFINIFLDKQWIAKQIELT 99

Query: 199 ----DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 254
                + +N V P T      +++D+S+PN+AK+MHVGHLRSTIIGD ++R LE+LGH V
Sbjct: 100 LQHEKLAINSVTPQT------IIIDYSAPNVAKQMHVGHLRSTIIGDAVARTLEFLGHKV 153

Query: 255 VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 314
           +R NH+GDWGTQFGMLIA+L+ K       +  +ADL+ FY+E+KK +DEDE F + A  
Sbjct: 154 IRANHIGDWGTQFGMLIAYLE-KVQQENATNMALADLETFYREAKKHYDEDENFAELARN 212

Query: 315 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYL 371
            VV LQ  D   +K W  + D++    Q+ Y RLNVTLTE    GES Y   +  +V  L
Sbjct: 213 YVVKLQSGDEYCRKMWHKLVDITMAQNQQTYQRLNVTLTEDDVMGESLYNNMLPDIVADL 272

Query: 372 EKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 426
             KGL    DG  +++      +D  ++ + I K DGG+ Y T+D+A  + R E   AD 
Sbjct: 273 TAKGLAVESDGAMVVYLDEFKNKDGDAMGVIIQKKDGGYLYTTTDIACAKYRHEILHADR 332

Query: 427 IVYVTDHRSYHQVLQAIA 444
           ++Y TD R +  ++QA A
Sbjct: 333 VLYYTDSRQHQHLMQAWA 350



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/375 (37%), Positives = 208/375 (55%), Gaps = 46/375 (12%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF----K 1157
            M+++  LS+  ++A+  A    G    S A        +FGD+Q N  M+  K      +
Sbjct: 1    MNIQALLSEKISNALVAA----GAPKGSDAHIRPSTKAQFGDYQANGVMSAAKKIGIPPR 56

Query: 1158 DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK-- 1215
               EK  P    ++IAS                 K+E+A PGF+N+FL + +  +QI+  
Sbjct: 57   QLAEKMLPLLKLENIAS-----------------KVEIAGPGFINIFLDKQWIAKQIELT 99

Query: 1216 ----DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 1271
                 + +N V P T      +++D+S+PN+AK+MHVGHLRSTIIGD ++R LE+LGH V
Sbjct: 100  LQHEKLAINSVTPQT------IIIDYSAPNVAKQMHVGHLRSTIIGDAVARTLEFLGHKV 153

Query: 1272 VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 1331
            +R NH+GDWGTQFGMLIA+L+ K       +  +ADL+ FY+E+KK +DEDE F + A  
Sbjct: 154  IRANHIGDWGTQFGMLIAYLE-KVQQENATNMALADLETFYREAKKHYDEDENFAELARN 212

Query: 1332 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYL 1388
             VV LQ  D   +K W  + D++    Q+ Y RLNVTLTE    GES Y   +  +V  L
Sbjct: 213  YVVKLQSGDEYCRKMWHKLVDITMAQNQQTYQRLNVTLTEDDVMGESLYNNMLPDIVADL 272

Query: 1389 EKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 1443
              KGL    DG  +++      +D  ++ + I K DGG+ Y T+D+A  + R E   AD 
Sbjct: 273  TAKGLAVESDGAMVVYLDEFKNKDGDAMGVIIQKKDGGYLYTTTDIACAKYRHEILHADR 332

Query: 1444 IVYVTDHRSYHQVLQ 1458
            ++Y TD R +  ++Q
Sbjct: 333  VLYYTDSRQHQHLMQ 347


>gi|218695442|ref|YP_002403109.1| arginyl-tRNA synthetase [Escherichia coli 55989]
 gi|407469746|ref|YP_006783811.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
 gi|407481591|ref|YP_006778740.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
 gi|410482140|ref|YP_006769686.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
 gi|417866979|ref|ZP_12512018.1| argS [Escherichia coli O104:H4 str. C227-11]
 gi|422987983|ref|ZP_16978756.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
 gi|422994874|ref|ZP_16985638.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
 gi|422999952|ref|ZP_16990706.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
 gi|423003620|ref|ZP_16994366.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
 gi|423010191|ref|ZP_17000925.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
 gi|423019417|ref|ZP_17010126.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
 gi|423024583|ref|ZP_17015280.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
 gi|423030404|ref|ZP_17021092.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
 gi|423038232|ref|ZP_17028906.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|423043353|ref|ZP_17034020.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|423045080|ref|ZP_17035740.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|423053618|ref|ZP_17042425.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|423060593|ref|ZP_17049389.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|429719456|ref|ZP_19254391.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429724792|ref|ZP_19259659.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429771343|ref|ZP_19303366.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
 gi|429781273|ref|ZP_19313204.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429784923|ref|ZP_19316828.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
 gi|429790904|ref|ZP_19322761.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
 gi|429796727|ref|ZP_19328538.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
 gi|429798329|ref|ZP_19330130.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
 gi|429806842|ref|ZP_19338569.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
 gi|429811675|ref|ZP_19343365.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
 gi|429817262|ref|ZP_19348903.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
 gi|429822473|ref|ZP_19354071.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
 gi|429907992|ref|ZP_19373956.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429913861|ref|ZP_19379809.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429918892|ref|ZP_19384824.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429924713|ref|ZP_19390627.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429928648|ref|ZP_19394550.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429935188|ref|ZP_19401074.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429940869|ref|ZP_19406743.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429943549|ref|ZP_19409412.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429951142|ref|ZP_19416988.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429954457|ref|ZP_19420289.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
 gi|254782962|sp|B7L7S9.1|SYR_ECO55 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|218352174|emb|CAU97913.1| arginyl-tRNA synthetase [Escherichia coli 55989]
 gi|341920268|gb|EGT69876.1| argS [Escherichia coli O104:H4 str. C227-11]
 gi|354861709|gb|EHF22147.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
 gi|354866994|gb|EHF27416.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
 gi|354869067|gb|EHF29477.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
 gi|354872923|gb|EHF33300.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
 gi|354879674|gb|EHF40010.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
 gi|354890274|gb|EHF50516.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
 gi|354894109|gb|EHF54306.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
 gi|354895734|gb|EHF55913.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|354898265|gb|EHF58420.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
 gi|354899910|gb|EHF60048.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|354913289|gb|EHF73283.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|354916716|gb|EHF76687.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|354919164|gb|EHF79115.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|406777302|gb|AFS56726.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
 gi|407053888|gb|AFS73939.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
 gi|407065781|gb|AFS86828.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
 gi|429347302|gb|EKY84076.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429349700|gb|EKY86436.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
 gi|429360826|gb|EKY97483.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
 gi|429362257|gb|EKY98904.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
 gi|429363577|gb|EKZ00210.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
 gi|429365646|gb|EKZ02258.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
 gi|429376501|gb|EKZ13029.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
 gi|429380543|gb|EKZ17032.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
 gi|429380989|gb|EKZ17477.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
 gi|429392764|gb|EKZ29163.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
 gi|429406399|gb|EKZ42658.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429408482|gb|EKZ44720.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429411837|gb|EKZ48042.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429420809|gb|EKZ56932.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429422600|gb|EKZ58714.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429424972|gb|EKZ61069.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429430173|gb|EKZ66239.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429433118|gb|EKZ69152.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429446389|gb|EKZ82319.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429447749|gb|EKZ83666.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429452896|gb|EKZ88774.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429457414|gb|EKZ93252.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
          Length = 577

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   +V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANSVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|416897803|ref|ZP_11927451.1| arginyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|417115540|ref|ZP_11966676.1| arginine--tRNA ligase [Escherichia coli 1.2741]
 gi|422799166|ref|ZP_16847665.1| arginyl-tRNA synthetase [Escherichia coli M863]
 gi|323968298|gb|EGB63705.1| arginyl-tRNA synthetase [Escherichia coli M863]
 gi|327253005|gb|EGE64659.1| arginyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|386140959|gb|EIG82111.1| arginine--tRNA ligase [Escherichia coli 1.2741]
          Length = 577

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDATVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDATVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDATVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|339999715|ref|YP_004730598.1| arginyl-tRNA synthetase [Salmonella bongori NCTC 12419]
 gi|339513076|emb|CCC30820.1| arginyl-tRNA synthetase [Salmonella bongori NCTC 12419]
          Length = 577

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/569 (40%), Positives = 329/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   G+  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEHVQQALASDRLGISQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/331 (39%), Positives = 194/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   G+  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEHVQQALASDRLGISQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 193/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   G+  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEHVQQALASDRLGISQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|437719619|ref|ZP_20828683.1| arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Enteritidis str. 648901 16-16]
 gi|435295179|gb|ELO71705.1| arginyl-tRNA synthetase, partial [Salmonella enterica subsp. enterica
            serovar Enteritidis str. 648901 16-16]
          Length = 570

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/566 (40%), Positives = 329/566 (58%), Gaps = 43/566 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILN 1065
              V   RL LA+ TAK +K   D L 
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLG 570



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|419232630|ref|ZP_13775410.1| arginyl-tRNA synthetase [Escherichia coli DEC9B]
 gi|419238092|ref|ZP_13780817.1| arginyl-tRNA synthetase [Escherichia coli DEC9C]
 gi|419243531|ref|ZP_13786172.1| arginyl-tRNA synthetase [Escherichia coli DEC9D]
 gi|378078496|gb|EHW40478.1| arginyl-tRNA synthetase [Escherichia coli DEC9B]
 gi|378084642|gb|EHW46544.1| arginyl-tRNA synthetase [Escherichia coli DEC9C]
 gi|378092139|gb|EHW53966.1| arginyl-tRNA synthetase [Escherichia coli DEC9D]
          Length = 577

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K               + +A  V + L  N     +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLGMA---------PRQLAEQVLTHLDPN----GIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 192/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K               + +A  V + L  N     +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLGMA---------PRQLAEQVLTHLDPN----GIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K               + +A  V + L  N     +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLGMA---------PRQLAEQVLTHLDPN----GIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYESLHADRVLYYIDSRQHQHLMQ 347


>gi|432397669|ref|ZP_19640450.1| arginyl-tRNA synthetase [Escherichia coli KTE25]
 gi|430915773|gb|ELC36851.1| arginyl-tRNA synthetase [Escherichia coli KTE25]
          Length = 577

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +A+L+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELANLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +A+L+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELANLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +A+L+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELANLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|354597884|ref|ZP_09015901.1| Arginyl-tRNA synthetase [Brenneria sp. EniD312]
 gi|353675819|gb|EHD21852.1| Arginyl-tRNA synthetase [Brenneria sp. EniD312]
          Length = 576

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 234/611 (38%), Positives = 342/611 (55%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A   +G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALAAAGAPIG----SEAQVRQSAKVQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++        +L  ++ K E+A PGF+N+FL + +   Q ++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALDGIVTKTEIAGPGFINIFLDKQWVASQAENALNDP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R N
Sbjct: 104  KLGVTPVEPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +D+D  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KVQNDNAGEMALSDLEAFYREAKKHYDDDAAFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQGGDEYCRQLWRKLIDITMTQNQLTYNRLNVTLTKDDVMGESLYNSMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLS+
Sbjct: 334  LYYIDSRQHQHLMQAWAIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+   + +KN   E    EL +    V+ G +KYADLS NR  DY+F +D ML
Sbjct: 393  LLDEAYERACQLIAEKNPQME--SDELQQLANVVSIGAVKYADLSKNRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ SI + A I  + L     + P++L  E+EF LA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVISIFKRAAIQEDSL-----TQPITLHEEREFVLATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V RD   H +C YLYD++  FS FY++C  +  + +     +   RL LA  TAK +
Sbjct: 506  VTTVARDGTPHVMCAYLYDLAGLFSGFYEHCPILNAEND----ELRQSRLKLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I T
Sbjct: 562  KQGLDTLGIDT 572



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/441 (34%), Positives = 232/441 (52%), Gaps = 47/441 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A   +G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQALAAAGAPIG----SEAQVRQSAKVQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++        +L  ++ K E+A PGF+N+FL + +   Q ++ +   
Sbjct: 53  -MPPRQLAEKVVQLL--------ALDGIVTKTEIAGPGFINIFLDKQWVASQAENALNDP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R N
Sbjct: 104 KLGVTPVEPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +D+D  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KVQNDNAGEMALSDLEAFYREAKKHYDDDAAFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  Y+RLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217 LQGGDEYCRQLWRKLIDITMTQNQLTYNRLNVTLTKDDVMGESLYNSMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 428 VYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDV 484
           +Y  D R +  ++QA A   K   +  S S +       +     P + R      LSD+
Sbjct: 334 LYYIDSRQHQHLMQAWAIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSDL 393

Query: 485 FTHAVQVAFPELGDKTASVAS 505
              A + A   + +K   + S
Sbjct: 394 LDEAYERACQLIAEKNPQMES 414



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 209/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A   +G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQALAAAGAPIG----SEAQVRQSAKVQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++        +L  ++ K E+A PGF+N+FL + +   Q ++ +   
Sbjct: 53   -MPPRQLAEKVVQLL--------ALDGIVTKTEIAGPGFINIFLDKQWVASQAENALNDP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R N
Sbjct: 104  KLGVTPVEPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +D+D  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KVQNDNAGEMALSDLEAFYREAKKHYDDDAAFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  Y+RLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQGGDEYCRQLWRKLIDITMTQNQLTYNRLNVTLTKDDVMGESLYNSMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|153950466|ref|YP_001401016.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|166987306|sp|A7FID8.1|SYR_YERP3 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|152961961|gb|ABS49422.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
          Length = 576

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/611 (38%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 334  LYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +   AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAVERAGKLIAEKN--PDMPADELKQVINAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ R AG++   L     + P+ +  ++E ALA  LL+  ++
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFRRAGVDENSL-----TLPLVITEDREAALATRLLQFEEI 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESE----EIRQSRLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIQT 572



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/377 (37%), Positives = 208/377 (55%), Gaps = 44/377 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53  -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217 LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277 LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 428 VYVTDHRSYHQVLQAIA 444
           +Y  D R +  ++QA A
Sbjct: 334 LYYIDSRQHQHLMQAWA 350



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 206/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|320539876|ref|ZP_08039535.1| arginyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030062|gb|EFW12082.1| arginyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 576

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/608 (37%), Positives = 340/608 (55%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD    A+  A    G      A   +    +FG++Q N  M+  K       
Sbjct: 1    MNIQVLLSDKVNQALIAA----GAPADCEAQVRQSAKAQFGNYQVNGVMSAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +   QI  ++   
Sbjct: 53   -MPPRQLAEKVLQLL--------ELGDIASKVEIAGPGFINIFLNSAWLARQIDWVLNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  ELGVTAVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L +K  +       ++DL+ FY+++KK +DED  F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYL-EKMQNENASDMGLSDLEQFYRQAKKHYDEDSEFAARARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  DP  +K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDPYCQKMWRKLVDITMAQNQLTYNRLNVTLTEGDVMGESLYNAMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++    +++   PM ++  K DGG+ Y T+DLA  + R E   A+ ++Y 
Sbjct: 277  LAVESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDLACAKYRYETLGANRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
            TD  Q  H        +KAG + P    ++   FG++LG+D K FKTR+G TVKLS+LLD
Sbjct: 337  TDSRQHQHLMQAWAIVRKAGYV-PESVSLEHHLFGMMLGKDGKPFKTRAGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   +  KN H  +   E+++  + V  G +KY+DLS +R  DY+F ++ ML   
Sbjct: 396  EAIERAGQLIAGKNPH--MPAQEITQLARVVGIGAVKYSDLSKSRTTDYIFDWNNMLAFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTRI S+ + AGI+   L     + P+ +  E E ALA  LL+  + L  
Sbjct: 454  GNTAPYMQYAYTRIVSVFKRAGIDESSL-----TLPLVMSEEHEIALATRLLQFEEALTA 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLY+++  FS FY++C  +  D+E     V   RL LA  T++ +K  
Sbjct: 509  VAREGTPHIMCSYLYELAGLFSSFYEHCQILNGDSE----AVRQSRLKLALLTSRTLKTG 564

Query: 1061 FDILNIRT 1068
             D L I T
Sbjct: 565  LDTLGIET 572



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/425 (35%), Positives = 226/425 (53%), Gaps = 41/425 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD    A+  A    G      A   +    +FG++Q N  M+  K       
Sbjct: 1   MNIQVLLSDKVNQALIAA----GAPADCEAQVRQSAKAQFGNYQVNGVMSAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +   QI  ++   
Sbjct: 53  -MPPRQLAEKVLQLL--------ELGDIASKVEIAGPGFINIFLNSAWLARQIDWVLNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104 ELGVTAVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L +K  +       ++DL+ FY+++KK +DED  F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYL-EKMQNENASDMGLSDLEQFYRQAKKHYDEDSEFAARARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  DP  +K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDPYCQKMWRKLVDITMAQNQLTYNRLNVTLTEGDVMGESLYNAMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++    +++   PM ++  K DGG+ Y T+DLA  + R E   A+ ++Y 
Sbjct: 277 LAVESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDLACAKYRYETLGANRVLYY 336

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTK---GTAKKMNVPVRDRMSVRDYLSDVFTH 487
           TD R +  ++QA A   K   +  S S +         K   P + R      LSD+   
Sbjct: 337 TDSRQHQHLMQAWAIVRKAGYVPESVSLEHHLFGMMLGKDGKPFKTRAGGTVKLSDLLDE 396

Query: 488 AVQVA 492
           A++ A
Sbjct: 397 AIERA 401



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 137/371 (36%), Positives = 207/371 (55%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD    A+  A    G      A   +    +FG++Q N  M+  K       
Sbjct: 1    MNIQVLLSDKVNQALIAA----GAPADCEAQVRQSAKAQFGNYQVNGVMSAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +   QI  ++   
Sbjct: 53   -MPPRQLAEKVLQLL--------ELGDIASKVEIAGPGFINIFLNSAWLARQIDWVLNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  ELGVTAVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L +K  +       ++DL+ FY+++KK +DED  F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYL-EKMQNENASDMGLSDLEQFYRQAKKHYDEDSEFAARARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  DP  +K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDPYCQKMWRKLVDITMAQNQLTYNRLNVTLTEGDVMGESLYNAMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++    +++   PM ++  K DGG+ Y T+DLA  + R E   A+ ++Y 
Sbjct: 277  LAVESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDLACAKYRYETLGANRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
            TD R +  ++Q
Sbjct: 337  TDSRQHQHLMQ 347


>gi|416751162|ref|ZP_11860016.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008283]
 gi|323255049|gb|EGA38837.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Montevideo str. IA_2010008283]
          Length = 577

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/569 (40%), Positives = 329/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
              + KTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GNRLKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  PT   +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLAEQVQQALASERLGVSQPT---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|218689874|ref|YP_002398086.1| arginyl-tRNA synthetase [Escherichia coli ED1a]
 gi|254782963|sp|B7MW70.1|SYR_ECO81 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|218427438|emb|CAR08336.2| arginyl-tRNA synthetase [Escherichia coli ED1a]
          Length = 577

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFHEMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 192/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFHEMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFHEMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|422781221|ref|ZP_16834006.1| arginyl-tRNA synthetase [Escherichia coli TW10509]
 gi|323977939|gb|EGB73025.1| arginyl-tRNA synthetase [Escherichia coli TW10509]
          Length = 577

 Score =  395 bits (1015), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|238762982|ref|ZP_04623949.1| Arginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698740|gb|EEP91490.1| Arginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 576

 Score =  395 bits (1015), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 234/608 (38%), Positives = 344/608 (56%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAIAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +   +        +L  +  KIE+A PGF+N+FL R +   ++ + +   
Sbjct: 53   -MQPRQLAEKVIEQL--------NLDGIASKIEIAGPGFINIFLDRQWVASKVDEALKAP 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GVQP    +   +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHRVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   ++   EL +   AV  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAIERAGKLIAEKN--PDMPADELKQVVDAVGIGAVKYADLSKSRTTDYIFDWDNMLALD 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ S+ + AGI+   L     + P+ +  ++E ALA  LL+  +V+  
Sbjct: 454  GNTAPYMQYAYTRVVSVFKRAGIDESSL-----TLPLVITEDREAALATRLLQFEEVITT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  ++E   ++    RL LA  TAK +K+ 
Sbjct: 509  VAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESEESRQS----RLKLAMLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             D L I+T
Sbjct: 565  LDTLGIQT 572



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/372 (37%), Positives = 207/372 (55%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAIAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +   +        +L  +  KIE+A PGF+N+FL R +   ++ + +   
Sbjct: 53  -MQPRQLAEKVIEQL--------NLDGIASKIEIAGPGFINIFLDRQWVASKVDEALKAP 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GVQP    +   +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVG
Sbjct: 104 KLGVQPV---EPQTIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHRVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280 ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 139/371 (37%), Positives = 206/371 (55%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S     +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEPQVRQSAKAQFGDYQANGVMAIAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +   +        +L  +  KIE+A PGF+N+FL R +   ++ + +   
Sbjct: 53   -MQPRQLAEKVIEQL--------NLDGIASKIEIAGPGFINIFLDRQWVASKVDEALKAP 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GVQP    +   +++D+S+PN+AK+MHVGHLRSTIIGD  +R LE+LGH V+R NHVG
Sbjct: 104  KLGVQPV---EPQTIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHRVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|416068902|ref|ZP_11582978.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype f str. D18P1]
 gi|348000529|gb|EGY41309.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype f str. D18P1]
          Length = 577

 Score =  395 bits (1015), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 331/564 (58%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KA   +  +D  Q  H +      +KAG + P+  +++   FG++LG+D K 
Sbjct: 321  AKYRYETLKASRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGIMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL++LLDE + R+   +  K+  T L+  E ++  +AV  G +KYADLS N
Sbjct: 380  FKTRSGDTVKLADLLDEAIERAGVLISQKS--TALSEQEKADVIEAVGIGSVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI   + IN  ++  A+    ++L +EKE
Sbjct: 438  RITDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQINPAEVEQAS----LTLTNEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +     V  
Sbjct: 494  RALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEHCPILNNEDQ----QVKL 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T + +K+  D+L I+T
Sbjct: 550  SRLKLALLTERTLKQGLDLLGIKT 573



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 188/328 (57%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142 VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201 DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261 YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E  KA   +  +D R    + QA
Sbjct: 321 AKYRYETLKASRALVFSDTRQSQHMQQA 348



 Score =  232 bits (591), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 187/327 (57%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KA   +  +D R    + Q
Sbjct: 321  AKYRYETLKASRALVFSDTRQSQHMQQ 347


>gi|386312262|ref|YP_006008427.1| arginyl-tRNA synthetase [Shewanella putrefaciens 200]
 gi|319424887|gb|ADV52961.1| arginyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 581

 Score =  395 bits (1015), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/567 (41%), Positives = 337/567 (59%), Gaps = 43/567 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K+       KNP ++AQ I       + T P+ A  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASA-FVAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F++     EQ+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALAEQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAHLELSDLETFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEALPVIIQKADGGYLYATSDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  + + ++ +GFG + GED 
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVREDMS-LEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTRSG  VKL +LL+E   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRSGGVVKLVDLLEEANVRALELVRSKN--PDMDEETLAEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI-ARTAGINSEDLRVAAQSTPVSLEH 981
             NR  DY+FSF++ML   GNTA YLLYAYTRIA I  R  G++    ++        LEH
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRIAGIFKRVTGLDLSQAKIV-------LEH 494

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            EKE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D + +   
Sbjct: 495  EKEKDLGNKLAQFGEILNRVVDKGQPHVLCAYLYELAGAFSSFYEACPVLAADNDEQ--- 551

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RLLL++ TA+ ++K  ++L I T
Sbjct: 552  -KNSRLLLSQLTARTLQKGLNLLGIET 577



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 195/322 (60%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K+       KNP ++AQ I       + T P+ A  + K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASA-FVAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F++     EQ+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFINDSALAEQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145 SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAHLELSDLETFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y TSDL
Sbjct: 265 SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEALPVIIQKADGGYLYATSDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSNVLKADRVLYFVDLR 346



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 195/322 (60%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K+       KNP ++AQ I       + T P+ A  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASA-FVAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F++     EQ+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALAEQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAHLELSDLETFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEALPVIIQKADGGYLYATSDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLR 346


>gi|417805397|ref|ZP_12452353.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
 gi|340740300|gb|EGR74525.1| arginyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
          Length = 563

 Score =  395 bits (1015), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 67

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 183

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 300

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 301  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 359

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   +V  G +KY
Sbjct: 360  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANSVGIGAVKY 417

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 418  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 473

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 474  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 531

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 532  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 559



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 21  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 67

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 125 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 183

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 244 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 300

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 301 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 336



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 67

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 183

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 300

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 301  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 333


>gi|283785614|ref|YP_003365479.1| arginyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282949068|emb|CBG88673.1| arginyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 577

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/567 (40%), Positives = 325/567 (57%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E ++  + +      + +K  V+VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAENVQQALNSERLGVAIPEKQTVVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+KK +
Sbjct: 142  AVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R +G++   L  A    PV L  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKSGLDESALAAA----PVILRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + +     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAEND----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K   D L I T
Sbjct: 547  VRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 191/331 (57%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E ++  + +      + +K  V+VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLAENVQQALNSERLGVAIPEKQTVVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+KK +
Sbjct: 142 AVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/330 (40%), Positives = 190/330 (57%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E ++  + +      + +K  V+VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAENVQQALNSERLGVAIPEKQTVVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+KK +
Sbjct: 142  AVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|161502977|ref|YP_001570089.1| arginyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
            62:z4,z23:- str. RSK2980]
 gi|189083545|sp|A9MNC4.1|SYR_SALAR RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|160864324|gb|ABX20947.1| hypothetical protein SARI_01039 [Salmonella enterica subsp. arizonae
            serovar 62:z4,z23:-]
          Length = 577

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/569 (40%), Positives = 330/569 (57%), Gaps = 43/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  EQ++  + +   GV  P    +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEQVQQALASDRLGVSQPA---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEGFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ + L     S PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQAL----ASAPVIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI--EKDAEGKI 1039
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  E DA    
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDA---- 546

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              V   RL LA+ TAK +K   D L I T
Sbjct: 547  --VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 195/331 (58%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  EQ++  + +   GV  P    +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEQVQQALASDRLGVSQPA---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEGFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  EQ++  + +   GV  P    +  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEQVQQALASDRLGVSQPA---RQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEGFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|444346002|ref|ZP_21153999.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype c str. AAS4A]
 gi|443542175|gb|ELT52538.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype c str. AAS4A]
          Length = 577

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 333/564 (59%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L +K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYL-EKMENEHASEMELSDLEAFYRAAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KA+  +  +D  Q  H +      +KAG + P+  +++   FG++LG+  K 
Sbjct: 321  AKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKYGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL++LLDE + R+   +  K+  T L+  E ++  +AV  G +KYADLS N
Sbjct: 380  FKTRSGDTVKLADLLDEAIERAGVLISQKS--TALSEQEKADVIEAVGIGSVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI   + I+  +++ A    P++L +EKE
Sbjct: 438  RITDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQISPGEVKQA----PLTLTNEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +     V  
Sbjct: 494  RALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEHCPILNNEDQ----QVKL 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T + +K+  D+L I+T
Sbjct: 550  SRLKLALLTERTLKQGLDLLGIKT 573



 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 143/393 (36%), Positives = 213/393 (54%), Gaps = 25/393 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L +K  +       ++DL+AFY+ +KK +
Sbjct: 142 VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYL-EKMENEHASEMELSDLEAFYRAAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 201 DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261 YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTA---KKMNVPV 471
            + R E  KA+  +  +D R    + QA     K   +  S   + K       K   P 
Sbjct: 321 AKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFQLEHKNFGMMLGKYGKPF 380

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA 504
           + R      L+D+   A++ A   +  K+ +++
Sbjct: 381 KTRSGDTVKLADLLDEAIERAGVLISQKSTALS 413



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 189/327 (57%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L +K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYL-EKMENEHASEMELSDLEAFYRAAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEGLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KA+  +  +D R    + Q
Sbjct: 321  AKYRYETLKANRALVFSDTRQSQHMQQ 347


>gi|336312988|ref|ZP_08567932.1| arginyl-tRNA synthetase [Shewanella sp. HN-41]
 gi|335863373|gb|EGM68525.1| arginyl-tRNA synthetase [Shewanella sp. HN-41]
          Length = 581

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/566 (41%), Positives = 335/566 (59%), Gaps = 41/566 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQTAIQDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRTQNGEQAQLELSDLETFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ KGLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVKDLDAKGLLTESNGAKVVFQEAFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  + + ++ +GFG + GED 
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVRDDMS-LEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTR+G  VKL +LL+E   R+LD ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRTGGVVKLVDLLEEANHRALDLVRSKN--PDMDAATLTEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I + A     DL   +Q+T V LEHE
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDVDL---SQATIV-LEHE 495

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            KE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D++ +    
Sbjct: 496  KEKDLGNKLAQFGEILNRVVDKGQPHVLCGYLYELAGAFSSFYEACPVLAADSDAQ---- 551

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RLLL++ TA+ ++K  ++L I T
Sbjct: 552  RDSRLLLSQLTARTLQKGLNLLGIET 577



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 189/322 (58%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFIDDSALANQLQTAIQDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145 SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRTQNGEQAQLELSDLETFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ KGLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265 SAYNADLEQVVKDLDAKGLLTESNGAKVVFQEAFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSNVLKADRVLYFVDLR 346



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 189/322 (58%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQTAIQDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRTQNGEQAQLELSDLETFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ KGLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVKDLDAKGLLTESNGAKVVFQEAFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLR 346


>gi|417689939|ref|ZP_12339166.1| arginyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332089609|gb|EGI94711.1| arginyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 577

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|420336387|ref|ZP_14837971.1| arginyl-tRNA synthetase [Shigella flexneri K-315]
 gi|391262544|gb|EIQ21566.1| arginyl-tRNA synthetase [Shigella flexneri K-315]
          Length = 577

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R +   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYDTLHADRMLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R +   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYDTLHADRMLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R +   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYDTLHADRMLYYIDSRQHQHLMQ 347


>gi|407456364|ref|YP_006734937.1| arginyl-tRNA synthetase [Chlamydia psittaci VS225]
 gi|405783625|gb|AFS22372.1| arginyl-tRNA synthetase [Chlamydia psittaci VS225]
          Length = 469

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/489 (43%), Positives = 306/489 (62%), Gaps = 24/489 (4%)

Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
           M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1   MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              P  IA+SI + ++               IE+A  GF+N   S+ +    ++    + 
Sbjct: 54  -MPPRAIAESIVNHISK---------NSFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDL 103

Query: 595 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104 SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWG 163

Query: 655 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
           T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164 TAFGMLITYLQEESSEDIEN---LEDLTILYKKAHARFAEDAEFKKRSQTNVVALQSGDP 220

Query: 715 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
             +K WE IC++S R FQKIY+ L++++ +RGESFY   + +++  LEKK L+ + D  K
Sbjct: 221 KARKLWERICEISERAFQKIYNILDISIGKRGESFYNPFLPEIIKDLEKKNLITISDNAK 280

Query: 775 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
            ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E + AD I+ VTD+GQ +HF+LLE 
Sbjct: 281 CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKIIIVTDMGQSLHFQLLEA 339

Query: 835 CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
            A  AG L PNK     VGFG+VL  + KKFKTRSG+ +KL ELLD  + +++  LK K+
Sbjct: 340 TALAAGYL-PNKEVFSHVGFGLVLDSEGKKFKTRSGENIKLQELLDMAIDQAVATLK-KH 397

Query: 895 RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
           R  E++  E++E    +    IKYADLS +R  DYVFSF+KML   GNTA+++LY Y RI
Sbjct: 398 R-PEMSEAEIAERAPVLGINAIKYADLSSHRVSDYVFSFEKMLRFEGNTAMFILYGYVRI 456

Query: 955 ASIARTAGI 963
             I R  GI
Sbjct: 457 QGIKRRLGI 465



 Score =  272 bits (696), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/362 (40%), Positives = 222/362 (61%), Gaps = 23/362 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1   MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P  IA+SI + ++               IE+A  GF+N   S+ +    ++    + 
Sbjct: 54  -MPPRAIAESIVNHISK---------NSFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDL 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104 SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164 TAFGMLITYLQEESSEDIEN---LEDLTILYKKAHARFAEDAEFKKRSQTNVVALQSGDP 220

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
             +K WE IC++S R FQKIY+ L++++ +RGESFY   + +++  LEKK L+ + D  K
Sbjct: 221 KARKLWERICEISERAFQKIYNILDISIGKRGESFYNPFLPEIIKDLEKKNLITISDNAK 280

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQA 442
            ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E + AD I+ VTD  +S H Q+L+A
Sbjct: 281 CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKIIIVTDMGQSLHFQLLEA 339

Query: 443 IA 444
            A
Sbjct: 340 TA 341



 Score =  270 bits (689), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 142/348 (40%), Positives = 213/348 (61%), Gaps = 21/348 (6%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++  YLS +   A+  AFP++   +  +  + ++    FG +QCNDAM L +  K    
Sbjct: 1    MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P  IA+SI + ++               IE+A  GF+N   S+ +    ++    + 
Sbjct: 54   -MPPRAIAESIVNHISK---------NSFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDL 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                 +    +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+  ++G+DV+RLNH+GDWG
Sbjct: 104  SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            T FGMLI +LQ++  + +     + DL   YK++  RF ED  FKKR+   VVALQ  DP
Sbjct: 164  TAFGMLITYLQEESSEDIEN---LEDLTILYKKAHARFAEDAEFKKRSQTNVVALQSGDP 220

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
              +K WE IC++S R FQKIY+ L++++ +RGESFY   + +++  LEKK L+ + D  K
Sbjct: 221  KARKLWERICEISERAFQKIYNILDISIGKRGESFYNPFLPEIIKDLEKKNLITISDNAK 280

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             ++ E   SIP+ + KSDGG+ Y T+DLAA+R R+E + AD I+ VTD
Sbjct: 281  CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKIIIVTD 327


>gi|419115083|ref|ZP_13660104.1| arginyl-tRNA synthetase [Escherichia coli DEC5A]
 gi|377961617|gb|EHV25084.1| arginyl-tRNA synthetase [Escherichia coli DEC5A]
          Length = 577

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELGKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|422371692|ref|ZP_16452067.1| arginyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|432898851|ref|ZP_20109543.1| arginyl-tRNA synthetase [Escherichia coli KTE192]
 gi|433028806|ref|ZP_20216667.1| arginyl-tRNA synthetase [Escherichia coli KTE109]
 gi|315296537|gb|EFU55834.1| arginyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|431426503|gb|ELH08547.1| arginyl-tRNA synthetase [Escherichia coli KTE192]
 gi|431543475|gb|ELI18456.1| arginyl-tRNA synthetase [Escherichia coli KTE109]
          Length = 577

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/567 (40%), Positives = 323/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 189/330 (57%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|398796723|ref|ZP_10556210.1| arginyl-tRNA synthetase [Pantoea sp. YR343]
 gi|398202725|gb|EJM89564.1| arginyl-tRNA synthetase [Pantoea sp. YR343]
          Length = 576

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/573 (39%), Positives = 328/573 (57%), Gaps = 52/573 (9%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+ +          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----QAPRQLAEQVIQ--------HLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL R +   Q    +      V+ V P T      ++VD+S+PN+AK+MHVGH+RS
Sbjct: 82   FINIFLDRAWLAAQTAQALQLPRLGVSSVAPQT------IVVDYSAPNVAKQMHVGHVRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  ++  +   +ADL+AFY+
Sbjct: 136  TIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQNEH-HEEIALADLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
            E+K  +D DE F +RA   VV LQ  D   +  W+ + D++    Q +YDRLNVTLT   
Sbjct: 195  EAKVTYDADEAFAERARNYVVKLQGGDEYCRSMWKKLVDITMSQNQLVYDRLNVTLTRND 254

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGF 795
              GES Y   +  +V  L +KGL    +G  +++        GE  G I   I K DGG+
Sbjct: 255  VMGESLYNDMLPGIVADLREKGLAVTSEGATVVFLDEFKNKEGEPMGVI---IQKKDGGY 311

Query: 796  TYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFG 855
             Y T+D+A  + R E   AD ++Y  D  Q  H +      +KAG + P    ++   FG
Sbjct: 312  LYTTTDIACAKYRFETLHADRVLYYIDSRQHQHLQQAWTIVRKAGYV-PESVPLEHHAFG 370

Query: 856  VVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGC 915
            ++LG+D + FKTRSG T++L++LLDE + R+   + +KN   E++  EL +  + V  G 
Sbjct: 371  MMLGKDGRPFKTRSGGTIRLADLLDEAVERAHTLVSEKN--PEMSAQELKDLSEVVGIGA 428

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
            +KYADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI+++ L     S 
Sbjct: 429  VKYADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDADSL-----SG 483

Query: 976  PVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDA 1035
             + L  E+E  LA  LL+  +V+  V RD   H +C YLYD++  FS FY++C  +  + 
Sbjct: 484  DIVLTEEREAQLATRLLQFEEVITQVARDGTPHVMCAYLYDLAGQFSGFYEHCPILSAED 543

Query: 1036 EGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            E     +   RL LA  TAK +K+  D L I+T
Sbjct: 544  E----NIRQSRLQLAALTAKTLKQGLDTLGIKT 572



 Score =  232 bits (592), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/337 (39%), Positives = 190/337 (56%), Gaps = 40/337 (11%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+ +          +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----QAPRQLAEQVIQ--------HLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL R +   Q    +      V+ V P T      ++VD+S+PN+AK+MHVGH+RS
Sbjct: 82  FINIFLDRAWLAAQTAQALQLPRLGVSSVAPQT------IVVDYSAPNVAKQMHVGHVRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  ++  +   +ADL+AFY+
Sbjct: 136 TIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQNEH-HEEIALADLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
           E+K  +D DE F +RA   VV LQ  D   +  W+ + D++    Q +YDRLNVTLT   
Sbjct: 195 EAKVTYDADEAFAERARNYVVKLQGGDEYCRSMWKKLVDITMSQNQLVYDRLNVTLTRND 254

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGF 405
             GES Y   +  +V  L +KGL    +G  +++        GE  G I   I K DGG+
Sbjct: 255 VMGESLYNDMLPGIVADLREKGLAVTSEGATVVFLDEFKNKEGEPMGVI---IQKKDGGY 311

Query: 406 TYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            Y T+D+A  + R E   AD ++Y  D R +  + QA
Sbjct: 312 LYTTTDIACAKYRFETLHADRVLYYIDSRQHQHLQQA 348



 Score =  231 bits (590), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 190/336 (56%), Gaps = 41/336 (12%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+ +          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----QAPRQLAEQVIQ--------HLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL R +   Q    +      V+ V P T      ++VD+S+PN+AK+MHVGH+RS
Sbjct: 82   FINIFLDRAWLAAQTAQALQLPRLGVSSVAPQT------IVVDYSAPNVAKQMHVGHVRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  ++  +   +ADL+AFY+
Sbjct: 136  TIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQNEH-HEEIALADLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
            E+K  +D DE F +RA   VV LQ  D   +  W+ + D++    Q +YDRLNVTLT   
Sbjct: 195  EAKVTYDADEAFAERARNYVVKLQGGDEYCRSMWKKLVDITMSQNQLVYDRLNVTLTRND 254

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGF 1422
              GES Y   +  +V  L +KGL    +G  +++        GE  G I   I K DGG+
Sbjct: 255  VMGESLYNDMLPGIVADLREKGLAVTSEGATVVFLDEFKNKEGEPMGVI---IQKKDGGY 311

Query: 1423 TYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             Y T+D+A  + R E   AD ++Y  D R  HQ LQ
Sbjct: 312  LYTTTDIACAKYRFETLHADRVLYYIDSRQ-HQHLQ 346


>gi|386388558|ref|ZP_10073419.1| arginine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
 gi|385697644|gb|EIG28056.1| arginine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
          Length = 575

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/567 (41%), Positives = 336/567 (59%), Gaps = 41/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K         NP + AQ I          N +L  + +K+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NVNLDGIAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL + +        +  VN G+Q  T      +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDKDWLAANANSALQAVNFGIQTATPQT---IVIDYSSPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENENATAMELSDLEAFYRAAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +D DE F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   G
Sbjct: 198  EHYDSDEAFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   + ++V  L++KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKEKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +AA + R E   AD ++  +D  Q  H +      +KAG + P+   ++   FG++LG+D
Sbjct: 318  IAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYV-PDSFSLEHPFFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL +LLDE + R+ DKL  + R  EL+  E +   +AVA G +KY+DL
Sbjct: 377  GKPFKTRSGGTVKLKDLLDEAVERA-DKLISE-RSQELSAEEKAAVVEAVAIGSVKYSDL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTRI SI   +GI++  L     +  + L  
Sbjct: 435  SKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRICSIFARSGIDAGKL-----TGEIVLTE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            +KE  LA  LL+  + L  V +D   H LC+YLY+++  FS FY+ C  +  +     + 
Sbjct: 490  DKERELAVKLLQFEEALNGVAKDGMPHILCQYLYELAGVFSSFYEACPILNAE-----EA 544

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL L   TA+ +K+  D+L I+T
Sbjct: 545  VKNSRLRLVALTARTLKQGLDLLGIKT 571



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 198/331 (59%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K         NP + AQ I          N +L  + +K+E+A PG
Sbjct: 35  EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NVNLDGIAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL + +        +  VN G+Q  T      +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDKDWLAANANSALQAVNFGIQTATPQT---IVIDYSSPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +K
Sbjct: 139 GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENENATAMELSDLEAFYRAAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +D DE F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   G
Sbjct: 198 EHYDSDEAFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   + ++V  L++KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258 ESLYNPMLPEIVADLKEKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +AA + R E   AD ++  +D R    + QA
Sbjct: 318 IAAAKYRYETLNADRVLVFSDSRQAQHMQQA 348



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 197/330 (59%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K         NP + AQ I          N +L  + +K+E+A PG
Sbjct: 35   EFGDYQANGAMGAAKKLG-----MNPREFAQKILD--------NVNLDGIAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII--VN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL + +        +  VN G+Q  T      +++D+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDKDWLAANANSALQAVNFGIQTATPQT---IVIDYSSPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +K
Sbjct: 139  GDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLE-KMENENATAMELSDLEAFYRAAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +D DE F ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+   G
Sbjct: 198  EHYDSDEAFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   + ++V  L++KGL   DDG  +++ E   ++   PM ++  K DGGF Y T+D
Sbjct: 258  ESLYNPMLPEIVADLKEKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +AA + R E   AD ++  +D R    + Q
Sbjct: 318  IAAAKYRYETLNADRVLVFSDSRQAQHMQQ 347


>gi|238919488|ref|YP_002933003.1| arginyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
 gi|259511644|sp|C5B832.1|SYR_EDWI9 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|238869057|gb|ACR68768.1| arginyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 577

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 238/611 (38%), Positives = 342/611 (55%), Gaps = 55/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++++ +SD  T A+  A    G    S A        +FGD+Q N  M+  K       
Sbjct: 1    MNIQEIISDKVTQALVAA----GAPAGSEALVRPSAKVQFGDYQANGIMSAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD----- 589
               P  +A+ + +        N +L  +  K+E+A PGF+N+FL   +   Q        
Sbjct: 53   -LPPRQLAEQVVA--------NLALDGIASKVEIAGPGFINIFLDAAWLAAQADAALADP 103

Query: 590  -IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVARVEPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+       T    +ADL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLEKVQGSSETGDMALADLEAFYREAKKHYDEDAAFAERARGYVVK 217

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++ R  Q+ YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 218  LQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   + K DGG+ Y T+D+A  + R E   A+ I
Sbjct: 278  LATESEGATVVFLNEFRNKEGEPMGVI---VQKKDGGYLYTTTDIACAKYRYETLGANRI 334

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KL++
Sbjct: 335  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLAD 393

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   +  KN   EL+  EL    + V  G +KYADLS NR  DY+F +D ML
Sbjct: 394  LLDEAIERAAKLIAAKN--PELSGDELKALVEVVGIGAVKYADLSKNRTTDYIFDWDNML 451

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + AGI+   L+ A     ++L  E+E ALA  L++  + 
Sbjct: 452  AFEGNTAPYMQYAYTRVASIFKRAGIDENTLQGA-----ITLTEEREKALATRLMQFEET 506

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            ++ V R+   H +C YLY+++  FS FY+ C  +  + E    +V   RL LA  TA+ +
Sbjct: 507  ILSVAREGTPHVMCAYLYEVAGLFSSFYEACPILNAEEE----SVRASRLKLAALTARTL 562

Query: 1058 KKCFDILNIRT 1068
            K   D L I+T
Sbjct: 563  KTGLDTLGIKT 573



 Score =  236 bits (603), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 144/375 (38%), Positives = 206/375 (54%), Gaps = 43/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++++ +SD  T A+  A    G    S A        +FGD+Q N  M+  K       
Sbjct: 1   MNIQEIISDKVTQALVAA----GAPAGSEALVRPSAKVQFGDYQANGIMSAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD----- 199
              P  +A+ + +        N +L  +  K+E+A PGF+N+FL   +   Q        
Sbjct: 53  -LPPRQLAEQVVA--------NLALDGIASKVEIAGPGFINIFLDAAWLAAQADAALADP 103

Query: 200 -IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 RLGVARVEPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+       T    +ADL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLEKVQGSSETGDMALADLEAFYREAKKHYDEDAAFAERARGYVVK 217

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++ R  Q+ YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 218 LQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   + K DGG+ Y T+D+A  + R E   A+ I
Sbjct: 278 LATESEGATVVFLNEFRNKEGEPMGVI---VQKKDGGYLYTTTDIACAKYRYETLGANRI 334

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 335 LYYIDSRQHQHLMQA 349



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/374 (38%), Positives = 205/374 (54%), Gaps = 43/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++++ +SD  T A+  A    G    S A        +FGD+Q N  M+  K       
Sbjct: 1    MNIQEIISDKVTQALVAA----GAPAGSEALVRPSAKVQFGDYQANGIMSAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD----- 1216
               P  +A+ + +        N +L  +  K+E+A PGF+N+FL   +   Q        
Sbjct: 53   -LPPRQLAEQVVA--------NLALDGIASKVEIAGPGFINIFLDAAWLAAQADAALADP 103

Query: 1217 -IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVARVEPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+       T    +ADL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLEKVQGSSETGDMALADLEAFYREAKKHYDEDAAFAERARGYVVK 217

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++ R  Q+ YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 218  LQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   + K DGG+ Y T+D+A  + R E   A+ I
Sbjct: 278  LATESEGATVVFLNEFRNKEGEPMGVI---VQKKDGGYLYTTTDIACAKYRYETLGANRI 334

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 335  LYYIDSRQHQHLMQ 348


>gi|293415191|ref|ZP_06657834.1| arginyl-tRNA synthetase [Escherichia coli B185]
 gi|331653286|ref|ZP_08354291.1| arginine--tRNA ligase [Escherichia coli M718]
 gi|291432839|gb|EFF05818.1| arginyl-tRNA synthetase [Escherichia coli B185]
 gi|331049384|gb|EGI21456.1| arginine--tRNA ligase [Escherichia coli M718]
          Length = 577

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLATA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|16129828|ref|NP_416390.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|170081532|ref|YP_001730852.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188493635|ref|ZP_03000905.1| arginyl-tRNA synthetase [Escherichia coli 53638]
 gi|194434108|ref|ZP_03066377.1| arginyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|238901091|ref|YP_002926887.1| arginyl-tRNA synthetase [Escherichia coli BW2952]
 gi|251785324|ref|YP_002999628.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253773167|ref|YP_003035998.1| arginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161936|ref|YP_003045044.1| arginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|254288724|ref|YP_003054472.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|291283058|ref|YP_003499876.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293410188|ref|ZP_06653764.1| arginyl-tRNA synthetase [Escherichia coli B354]
 gi|300822350|ref|ZP_07102491.1| arginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300928908|ref|ZP_07144413.1| arginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300935853|ref|ZP_07150811.1| arginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|301029326|ref|ZP_07192423.1| arginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301645607|ref|ZP_07245536.1| arginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|312969919|ref|ZP_07784102.1| arginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331642494|ref|ZP_08343629.1| arginine--tRNA ligase [Escherichia coli H736]
 gi|331657926|ref|ZP_08358888.1| arginine--tRNA ligase [Escherichia coli TA206]
 gi|331683384|ref|ZP_08383985.1| arginine--tRNA ligase [Escherichia coli H299]
 gi|386280937|ref|ZP_10058601.1| arginyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|386595312|ref|YP_006091712.1| arginyl-tRNA synthetase [Escherichia coli DH1]
 gi|387507125|ref|YP_006159381.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
 gi|387612363|ref|YP_006115479.1| arginyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|387621596|ref|YP_006129223.1| arginyl-tRNA synthetase [Escherichia coli DH1]
 gi|388477950|ref|YP_490138.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|404375253|ref|ZP_10980441.1| arginyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|415775291|ref|ZP_11487207.1| arginyl-tRNA synthetase [Escherichia coli 3431]
 gi|416288987|ref|ZP_11649424.1| Arginyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|416785967|ref|ZP_11878863.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|416796946|ref|ZP_11883780.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|416808390|ref|ZP_11888435.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
 gi|416827644|ref|ZP_11897660.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|416829024|ref|ZP_11898318.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|417124410|ref|ZP_11973099.1| arginine--tRNA ligase [Escherichia coli 97.0246]
 gi|417263119|ref|ZP_12050565.1| arginine--tRNA ligase [Escherichia coli 2.3916]
 gi|417271102|ref|ZP_12058451.1| arginine--tRNA ligase [Escherichia coli 2.4168]
 gi|417276849|ref|ZP_12064175.1| arginine--tRNA ligase [Escherichia coli 3.2303]
 gi|417292771|ref|ZP_12080052.1| arginine--tRNA ligase [Escherichia coli B41]
 gi|417613298|ref|ZP_12263759.1| arginyl-tRNA synthetase [Escherichia coli STEC_EH250]
 gi|417618439|ref|ZP_12268859.1| arginyl-tRNA synthetase [Escherichia coli G58-1]
 gi|417634794|ref|ZP_12285008.1| arginyl-tRNA synthetase [Escherichia coli STEC_S1191]
 gi|417639412|ref|ZP_12289562.1| arginyl-tRNA synthetase [Escherichia coli TX1999]
 gi|417671950|ref|ZP_12321431.1| arginyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|417943551|ref|ZP_12586799.1| arginyl-tRNA synthetase [Escherichia coli XH140A]
 gi|417974975|ref|ZP_12615776.1| arginyl-tRNA synthetase [Escherichia coli XH001]
 gi|418303205|ref|ZP_12914999.1| arginyl-tRNA synthetase [Escherichia coli UMNF18]
 gi|418957755|ref|ZP_13509678.1| arginyl-tRNA synthetase [Escherichia coli J53]
 gi|419075678|ref|ZP_13621209.1| arginyl-tRNA synthetase [Escherichia coli DEC3F]
 gi|419120706|ref|ZP_13665672.1| arginyl-tRNA synthetase [Escherichia coli DEC5B]
 gi|419126349|ref|ZP_13671238.1| arginyl-tRNA synthetase [Escherichia coli DEC5C]
 gi|419131813|ref|ZP_13676654.1| arginyl-tRNA synthetase [Escherichia coli DEC5D]
 gi|419136698|ref|ZP_13681497.1| arginyl-tRNA synthetase [Escherichia coli DEC5E]
 gi|419142736|ref|ZP_13687480.1| arginyl-tRNA synthetase [Escherichia coli DEC6A]
 gi|419148699|ref|ZP_13693361.1| arginyl-tRNA synthetase [Escherichia coli DEC6B]
 gi|419154115|ref|ZP_13698682.1| arginyl-tRNA synthetase [Escherichia coli DEC6C]
 gi|419170436|ref|ZP_13714326.1| arginyl-tRNA synthetase [Escherichia coli DEC7A]
 gi|419175535|ref|ZP_13719380.1| arginyl-tRNA synthetase [Escherichia coli DEC7B]
 gi|419181086|ref|ZP_13724703.1| arginyl-tRNA synthetase [Escherichia coli DEC7C]
 gi|419186522|ref|ZP_13730039.1| arginyl-tRNA synthetase [Escherichia coli DEC7D]
 gi|419191808|ref|ZP_13735268.1| arginyl-tRNA synthetase [Escherichia coli DEC7E]
 gi|419700673|ref|ZP_14228278.1| arginyl-tRNA synthetase [Escherichia coli SCI-07]
 gi|419808972|ref|ZP_14333858.1| arginyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
 gi|419941974|ref|ZP_14458624.1| arginyl-tRNA synthetase [Escherichia coli 75]
 gi|420280881|ref|ZP_14783128.1| arginine--tRNA ligase [Escherichia coli TW06591]
 gi|420347231|ref|ZP_14848632.1| arginyl-tRNA synthetase [Shigella boydii 965-58]
 gi|420385875|ref|ZP_14885233.1| arginyl-tRNA synthetase [Escherichia coli EPECa12]
 gi|421774236|ref|ZP_16210849.1| arginyl-tRNA synthetase [Escherichia coli AD30]
 gi|422335194|ref|ZP_16416195.1| arginyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
 gi|422381543|ref|ZP_16461707.1| arginyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|422766442|ref|ZP_16820169.1| arginyl-tRNA synthetase [Escherichia coli E1520]
 gi|422772247|ref|ZP_16825935.1| arginyl-tRNA synthetase [Escherichia coli E482]
 gi|422786466|ref|ZP_16839205.1| arginyl-tRNA synthetase [Escherichia coli H489]
 gi|422816842|ref|ZP_16865056.1| arginyl-tRNA synthetase [Escherichia coli M919]
 gi|423704657|ref|ZP_17679080.1| arginyl-tRNA synthetase [Escherichia coli H730]
 gi|425115260|ref|ZP_18517068.1| arginine--tRNA ligase [Escherichia coli 8.0566]
 gi|425119979|ref|ZP_18521685.1| arginine--tRNA ligase [Escherichia coli 8.0569]
 gi|425249342|ref|ZP_18642337.1| arginine--tRNA ligase [Escherichia coli 5905]
 gi|425267477|ref|ZP_18659160.1| arginine--tRNA ligase [Escherichia coli 5412]
 gi|425272990|ref|ZP_18664423.1| arginine--tRNA ligase [Escherichia coli TW15901]
 gi|425283471|ref|ZP_18674531.1| arginine--tRNA ligase [Escherichia coli TW00353]
 gi|432370002|ref|ZP_19613091.1| arginyl-tRNA synthetase [Escherichia coli KTE10]
 gi|432377029|ref|ZP_19620026.1| arginyl-tRNA synthetase [Escherichia coli KTE12]
 gi|432406885|ref|ZP_19649594.1| arginyl-tRNA synthetase [Escherichia coli KTE28]
 gi|432417104|ref|ZP_19659715.1| arginyl-tRNA synthetase [Escherichia coli KTE44]
 gi|432465940|ref|ZP_19708029.1| arginyl-tRNA synthetase [Escherichia coli KTE205]
 gi|432564075|ref|ZP_19800665.1| arginyl-tRNA synthetase [Escherichia coli KTE51]
 gi|432580624|ref|ZP_19817050.1| arginyl-tRNA synthetase [Escherichia coli KTE56]
 gi|432584018|ref|ZP_19820417.1| arginyl-tRNA synthetase [Escherichia coli KTE57]
 gi|432616843|ref|ZP_19852964.1| arginyl-tRNA synthetase [Escherichia coli KTE75]
 gi|432627462|ref|ZP_19863442.1| arginyl-tRNA synthetase [Escherichia coli KTE77]
 gi|432637104|ref|ZP_19872980.1| arginyl-tRNA synthetase [Escherichia coli KTE81]
 gi|432661111|ref|ZP_19896757.1| arginyl-tRNA synthetase [Escherichia coli KTE111]
 gi|432685665|ref|ZP_19920967.1| arginyl-tRNA synthetase [Escherichia coli KTE156]
 gi|432691817|ref|ZP_19927048.1| arginyl-tRNA synthetase [Escherichia coli KTE161]
 gi|432704634|ref|ZP_19939738.1| arginyl-tRNA synthetase [Escherichia coli KTE171]
 gi|432732563|ref|ZP_19967396.1| arginyl-tRNA synthetase [Escherichia coli KTE45]
 gi|432737369|ref|ZP_19972135.1| arginyl-tRNA synthetase [Escherichia coli KTE42]
 gi|432759647|ref|ZP_19994142.1| arginyl-tRNA synthetase [Escherichia coli KTE46]
 gi|432955311|ref|ZP_20147251.1| arginyl-tRNA synthetase [Escherichia coli KTE197]
 gi|432968000|ref|ZP_20156915.1| arginyl-tRNA synthetase [Escherichia coli KTE203]
 gi|433048156|ref|ZP_20235525.1| arginyl-tRNA synthetase [Escherichia coli KTE120]
 gi|433073032|ref|ZP_20259696.1| arginyl-tRNA synthetase [Escherichia coli KTE129]
 gi|433135107|ref|ZP_20320461.1| arginyl-tRNA synthetase [Escherichia coli KTE166]
 gi|433183481|ref|ZP_20367745.1| arginyl-tRNA synthetase [Escherichia coli KTE85]
 gi|442590218|ref|ZP_21009000.1| Arginyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
            23506]
 gi|442598179|ref|ZP_21015952.1| Arginyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
            23502]
 gi|450189525|ref|ZP_21890588.1| arginyl-tRNA synthetase [Escherichia coli SEPT362]
 gi|450244533|ref|ZP_21900384.1| arginyl-tRNA synthetase [Escherichia coli S17]
 gi|135169|sp|P11875.1|SYR_ECOLI RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|229558757|sp|B1XHE4.1|SYR_ECODH RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|259511643|sp|C4ZQG0.1|SYR_ECOBW RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|581040|emb|CAA33384.1| unnamed protein product [Escherichia coli K-12]
 gi|1736522|dbj|BAA15686.1| arginyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1788184|gb|AAC74946.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|169889367|gb|ACB03074.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188488834|gb|EDU63937.1| arginyl-tRNA synthetase [Escherichia coli 53638]
 gi|194417652|gb|EDX33752.1| arginyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|209767328|gb|ACI81976.1| arginine tRNA synthetase [Escherichia coli]
 gi|209767334|gb|ACI81979.1| arginine tRNA synthetase [Escherichia coli]
 gi|238860014|gb|ACR62012.1| arginyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242377597|emb|CAQ32353.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324211|gb|ACT28813.1| arginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973837|gb|ACT39508.1| arginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978031|gb|ACT43701.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|260449001|gb|ACX39423.1| arginyl-tRNA synthetase [Escherichia coli DH1]
 gi|290762931|gb|ADD56892.1| Arginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291470656|gb|EFF13140.1| arginyl-tRNA synthetase [Escherichia coli B354]
 gi|299877752|gb|EFI85963.1| arginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300458965|gb|EFK22458.1| arginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300463136|gb|EFK26629.1| arginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300525233|gb|EFK46302.1| arginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|301076139|gb|EFK90945.1| arginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|309702099|emb|CBJ01414.1| arginyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310338204|gb|EFQ03293.1| arginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315136519|dbj|BAJ43678.1| arginyl-tRNA synthetase [Escherichia coli DH1]
 gi|315617901|gb|EFU98499.1| arginyl-tRNA synthetase [Escherichia coli 3431]
 gi|320177757|gb|EFW52745.1| Arginyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320647090|gb|EFX15923.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652373|gb|EFX20671.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320657974|gb|EFX25736.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
            07815]
 gi|320658547|gb|EFX26241.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668445|gb|EFX35272.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323937134|gb|EGB33414.1| arginyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940456|gb|EGB36647.1| arginyl-tRNA synthetase [Escherichia coli E482]
 gi|323961931|gb|EGB57530.1| arginyl-tRNA synthetase [Escherichia coli H489]
 gi|324007268|gb|EGB76487.1| arginyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|331039292|gb|EGI11512.1| arginine--tRNA ligase [Escherichia coli H736]
 gi|331056174|gb|EGI28183.1| arginine--tRNA ligase [Escherichia coli TA206]
 gi|331079599|gb|EGI50796.1| arginine--tRNA ligase [Escherichia coli H299]
 gi|332095145|gb|EGJ00176.1| arginyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|339415303|gb|AEJ56975.1| arginyl-tRNA synthetase [Escherichia coli UMNF18]
 gi|342364877|gb|EGU28976.1| arginyl-tRNA synthetase [Escherichia coli XH140A]
 gi|344195584|gb|EGV49653.1| arginyl-tRNA synthetase [Escherichia coli XH001]
 gi|345362809|gb|EGW94954.1| arginyl-tRNA synthetase [Escherichia coli STEC_EH250]
 gi|345376812|gb|EGX08745.1| arginyl-tRNA synthetase [Escherichia coli G58-1]
 gi|345388285|gb|EGX18096.1| arginyl-tRNA synthetase [Escherichia coli STEC_S1191]
 gi|345393810|gb|EGX23579.1| arginyl-tRNA synthetase [Escherichia coli TX1999]
 gi|359332354|dbj|BAL38801.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. MDS42]
 gi|373243795|gb|EHP63293.1| arginyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
 gi|374359119|gb|AEZ40826.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
 gi|377923295|gb|EHU87262.1| arginyl-tRNA synthetase [Escherichia coli DEC3F]
 gi|377968913|gb|EHV32304.1| arginyl-tRNA synthetase [Escherichia coli DEC5B]
 gi|377976404|gb|EHV39715.1| arginyl-tRNA synthetase [Escherichia coli DEC5C]
 gi|377977216|gb|EHV40517.1| arginyl-tRNA synthetase [Escherichia coli DEC5D]
 gi|377985032|gb|EHV48254.1| arginyl-tRNA synthetase [Escherichia coli DEC5E]
 gi|377994241|gb|EHV57369.1| arginyl-tRNA synthetase [Escherichia coli DEC6B]
 gi|377995378|gb|EHV58495.1| arginyl-tRNA synthetase [Escherichia coli DEC6A]
 gi|377998154|gb|EHV61249.1| arginyl-tRNA synthetase [Escherichia coli DEC6C]
 gi|378016667|gb|EHV79547.1| arginyl-tRNA synthetase [Escherichia coli DEC7A]
 gi|378024454|gb|EHV87108.1| arginyl-tRNA synthetase [Escherichia coli DEC7C]
 gi|378030226|gb|EHV92830.1| arginyl-tRNA synthetase [Escherichia coli DEC7D]
 gi|378035066|gb|EHV97630.1| arginyl-tRNA synthetase [Escherichia coli DEC7B]
 gi|378039751|gb|EHW02239.1| arginyl-tRNA synthetase [Escherichia coli DEC7E]
 gi|380348156|gb|EIA36439.1| arginyl-tRNA synthetase [Escherichia coli SCI-07]
 gi|384379364|gb|EIE37232.1| arginyl-tRNA synthetase [Escherichia coli J53]
 gi|385157902|gb|EIF19892.1| arginyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
 gi|385539513|gb|EIF86345.1| arginyl-tRNA synthetase [Escherichia coli M919]
 gi|385705300|gb|EIG42365.1| arginyl-tRNA synthetase [Escherichia coli H730]
 gi|386122120|gb|EIG70733.1| arginyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|386146305|gb|EIG92753.1| arginine--tRNA ligase [Escherichia coli 97.0246]
 gi|386223197|gb|EII45574.1| arginine--tRNA ligase [Escherichia coli 2.3916]
 gi|386234802|gb|EII66778.1| arginine--tRNA ligase [Escherichia coli 2.4168]
 gi|386240338|gb|EII77262.1| arginine--tRNA ligase [Escherichia coli 3.2303]
 gi|386255093|gb|EIJ04783.1| arginine--tRNA ligase [Escherichia coli B41]
 gi|388399071|gb|EIL59878.1| arginyl-tRNA synthetase [Escherichia coli 75]
 gi|390782822|gb|EIO50456.1| arginine--tRNA ligase [Escherichia coli TW06591]
 gi|391271602|gb|EIQ30474.1| arginyl-tRNA synthetase [Shigella boydii 965-58]
 gi|391305923|gb|EIQ63691.1| arginyl-tRNA synthetase [Escherichia coli EPECa12]
 gi|404291314|gb|EJZ48204.1| arginyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|408165397|gb|EKH93080.1| arginine--tRNA ligase [Escherichia coli 5905]
 gi|408184239|gb|EKI10572.1| arginine--tRNA ligase [Escherichia coli 5412]
 gi|408194249|gb|EKI19737.1| arginine--tRNA ligase [Escherichia coli TW15901]
 gi|408202759|gb|EKI27821.1| arginine--tRNA ligase [Escherichia coli TW00353]
 gi|408460866|gb|EKJ84644.1| arginyl-tRNA synthetase [Escherichia coli AD30]
 gi|408569678|gb|EKK45665.1| arginine--tRNA ligase [Escherichia coli 8.0566]
 gi|408570920|gb|EKK46876.1| arginine--tRNA ligase [Escherichia coli 8.0569]
 gi|430885629|gb|ELC08500.1| arginyl-tRNA synthetase [Escherichia coli KTE10]
 gi|430899321|gb|ELC21426.1| arginyl-tRNA synthetase [Escherichia coli KTE12]
 gi|430929644|gb|ELC50153.1| arginyl-tRNA synthetase [Escherichia coli KTE28]
 gi|430940466|gb|ELC60649.1| arginyl-tRNA synthetase [Escherichia coli KTE44]
 gi|430993524|gb|ELD09868.1| arginyl-tRNA synthetase [Escherichia coli KTE205]
 gi|431094667|gb|ELE00298.1| arginyl-tRNA synthetase [Escherichia coli KTE51]
 gi|431105455|gb|ELE09790.1| arginyl-tRNA synthetase [Escherichia coli KTE56]
 gi|431116337|gb|ELE19785.1| arginyl-tRNA synthetase [Escherichia coli KTE57]
 gi|431155083|gb|ELE55844.1| arginyl-tRNA synthetase [Escherichia coli KTE75]
 gi|431164155|gb|ELE64556.1| arginyl-tRNA synthetase [Escherichia coli KTE77]
 gi|431172093|gb|ELE72244.1| arginyl-tRNA synthetase [Escherichia coli KTE81]
 gi|431200227|gb|ELE98953.1| arginyl-tRNA synthetase [Escherichia coli KTE111]
 gi|431222700|gb|ELF19976.1| arginyl-tRNA synthetase [Escherichia coli KTE156]
 gi|431227292|gb|ELF24429.1| arginyl-tRNA synthetase [Escherichia coli KTE161]
 gi|431243940|gb|ELF38268.1| arginyl-tRNA synthetase [Escherichia coli KTE171]
 gi|431275750|gb|ELF66777.1| arginyl-tRNA synthetase [Escherichia coli KTE45]
 gi|431284469|gb|ELF75327.1| arginyl-tRNA synthetase [Escherichia coli KTE42]
 gi|431308820|gb|ELF97099.1| arginyl-tRNA synthetase [Escherichia coli KTE46]
 gi|431467982|gb|ELH47988.1| arginyl-tRNA synthetase [Escherichia coli KTE197]
 gi|431471117|gb|ELH51010.1| arginyl-tRNA synthetase [Escherichia coli KTE203]
 gi|431566262|gb|ELI39301.1| arginyl-tRNA synthetase [Escherichia coli KTE120]
 gi|431588764|gb|ELI60034.1| arginyl-tRNA synthetase [Escherichia coli KTE129]
 gi|431657970|gb|ELJ24932.1| arginyl-tRNA synthetase [Escherichia coli KTE166]
 gi|431707579|gb|ELJ72112.1| arginyl-tRNA synthetase [Escherichia coli KTE85]
 gi|441609499|emb|CCP94913.1| Arginyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
            23506]
 gi|441653192|emb|CCQ01655.1| Arginyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
            23502]
 gi|449321218|gb|EMD11233.1| arginyl-tRNA synthetase [Escherichia coli S17]
 gi|449321468|gb|EMD11480.1| arginyl-tRNA synthetase [Escherichia coli SEPT362]
          Length = 577

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|126176036|ref|YP_001052185.1| arginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|386342792|ref|YP_006039158.1| arginyl-tRNA synthetase [Shewanella baltica OS117]
 gi|166232839|sp|A3D9A3.1|SYR_SHEB5 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|125999241|gb|ABN63316.1| arginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|334865193|gb|AEH15664.1| arginyl-tRNA synthetase [Shewanella baltica OS117]
          Length = 581

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/566 (41%), Positives = 336/566 (59%), Gaps = 41/566 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K+       KNP ++AQ I       + T P+ A V  K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASAYVA-KVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++       K+   ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEKAQLELSDLENFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  + + ++ +GFG + GED 
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVREDMS-LEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTRSG  VKL +LL+E   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRSGGVVKLVDLLEEANVRALELVRSKN--PDMDEATLTEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I +   +   DL  A     + LEHE
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKR--VTDLDLSQA----KIVLEHE 495

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            KE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D + +    
Sbjct: 496  KEKDLGNKLAQFGEILSRVVDKGQPHVLCAYLYELAGAFSSFYEACPVLAADNDAQ---- 551

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RLLLA+ TA+ ++K  ++L I T
Sbjct: 552  KNSRLLLAQLTARTLQKGLNLLGIET 577



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 194/322 (60%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K+       KNP ++AQ I       + T P+ A V  K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASAYVA-KVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++       K+   ++DL+ FY+ +K 
Sbjct: 145 SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEKAQLELSDLENFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265 SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSNVLKADRVLYFVDLR 346



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 194/322 (60%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K+       KNP ++AQ I       + T P+ A V  K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASAYVA-KVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++       K+   ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEKAQLELSDLENFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLR 346


>gi|238751578|ref|ZP_04613068.1| Arginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710140|gb|EEQ02368.1| Arginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 576

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 234/611 (38%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +   +E+A PGF+N+FL R +   +++  +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIASNVEIAGPGFINIFLDRQWVASKVEQALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT     GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTTDDVMGESLYNSMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 334  LYYIDTRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +  +AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAIERAGKLIAEKN--PDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ + AGI+   L     + P+ +  ++E ALA  LL+  +V
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFKRAGIDENSL-----TLPLVITEDREAALATRLLQFEEV 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  + E   ++    RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDLAGLFSSFYEHCPILNAENEESRQS----RLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIQT 572



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/375 (37%), Positives = 206/375 (54%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +   +E+A PGF+N+FL R +   +++  +   
Sbjct: 53  -MQPRQLAEKVIELL--------DLDGIASNVEIAGPGFINIFLDRQWVASKVEQALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT     GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTTDDVMGESLYNSMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDTRQHQHLMQA 348



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 205/374 (54%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPAGSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +   +E+A PGF+N+FL R +   +++  +   
Sbjct: 53   -MQPRQLAEKVIELL--------DLDGIASNVEIAGPGFINIFLDRQWVASKVEQALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT     GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTTDDVMGESLYNSMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDTRQHQHLMQ 347


>gi|444334097|ref|ZP_21149724.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype a str. A160]
 gi|443550863|gb|ELT58981.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
            serotype a str. A160]
          Length = 577

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 331/564 (58%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E  KA   +  +D  Q  H +      +KAG + P+  +++   FG++LG+D K 
Sbjct: 321  AKYRYETLKASRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL++LLDE + R+   +  K+  T L+  E ++  +AV  G +KYADLS N
Sbjct: 380  FKTRSGDTVKLADLLDEAIERAGVLISQKS--TALSEQEKADVIEAVGIGSVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTRI SI   + IN  ++  A+    ++L +EKE
Sbjct: 438  RITDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQINPAEVEQAS----LTLTNEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  + + LV +D   H LC YLY+++  FS FY++C  +  + +     V  
Sbjct: 494  RALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEHCPILNNEDQ----QVKL 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T + +K+  D+L I+T
Sbjct: 550  SRLKLALLTERTLKQGLDLLGIKT 573



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 188/328 (57%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142 VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201 DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261 YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E  KA   +  +D R    + QA
Sbjct: 321 AKYRYETLKASRALVFSDTRQSQHMQQA 348



 Score =  232 bits (591), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 187/327 (57%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ + +           L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----INPREFAQLVLA--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E I + + +         K  V+VD+SSPN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLKDGWLAENIGNAVKDSKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +KK +
Sbjct: 142  VVRTLEFLGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTL E+   GES 
Sbjct: 201  DEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL   DDG  +++      +D G + + + K DGGF Y T+D+AA
Sbjct: 261  YNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E  KA   +  +D R    + Q
Sbjct: 321  AKYRYETLKASRALVFSDTRQSQHMQQ 347


>gi|170769348|ref|ZP_02903801.1| arginyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170121672|gb|EDS90603.1| arginyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 577

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   G+  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGIATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEISEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   G+  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGIATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   G+  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGIATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +       +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQEN-AGDMELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|15831840|ref|NP_310613.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168747906|ref|ZP_02772928.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168757913|ref|ZP_02782920.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168770862|ref|ZP_02795869.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776574|ref|ZP_02801581.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783179|ref|ZP_02808186.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789744|ref|ZP_02814751.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168801885|ref|ZP_02826892.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195939580|ref|ZP_03084962.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208810380|ref|ZP_03252256.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816722|ref|ZP_03257842.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208818546|ref|ZP_03258866.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209395919|ref|YP_002270960.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|254793500|ref|YP_003078337.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261227623|ref|ZP_05941904.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258211|ref|ZP_05950744.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|387882984|ref|YP_006313286.1| arginyl-tRNA synthetase [Escherichia coli Xuzhou21]
 gi|416312387|ref|ZP_11657588.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|416323102|ref|ZP_11664711.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|416327357|ref|ZP_11667364.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|416773964|ref|ZP_11873958.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|419045737|ref|ZP_13592683.1| arginyl-tRNA synthetase [Escherichia coli DEC3A]
 gi|419051414|ref|ZP_13598295.1| arginyl-tRNA synthetase [Escherichia coli DEC3B]
 gi|419057416|ref|ZP_13604231.1| arginyl-tRNA synthetase [Escherichia coli DEC3C]
 gi|419062797|ref|ZP_13609536.1| arginyl-tRNA synthetase [Escherichia coli DEC3D]
 gi|419069711|ref|ZP_13615346.1| arginyl-tRNA synthetase [Escherichia coli DEC3E]
 gi|419080931|ref|ZP_13626388.1| arginyl-tRNA synthetase [Escherichia coli DEC4A]
 gi|419086566|ref|ZP_13631936.1| arginyl-tRNA synthetase [Escherichia coli DEC4B]
 gi|419092720|ref|ZP_13638013.1| arginyl-tRNA synthetase [Escherichia coli DEC4C]
 gi|419098509|ref|ZP_13643722.1| arginyl-tRNA synthetase [Escherichia coli DEC4D]
 gi|419104189|ref|ZP_13649330.1| arginyl-tRNA synthetase [Escherichia coli DEC4E]
 gi|419109743|ref|ZP_13654810.1| arginyl-tRNA synthetase [Escherichia coli DEC4F]
 gi|420269744|ref|ZP_14772116.1| arginine--tRNA ligase [Escherichia coli PA22]
 gi|420275641|ref|ZP_14777942.1| arginine--tRNA ligase [Escherichia coli PA40]
 gi|420286803|ref|ZP_14789000.1| arginine--tRNA ligase [Escherichia coli TW10246]
 gi|420292623|ref|ZP_14794755.1| arginine--tRNA ligase [Escherichia coli TW11039]
 gi|420298431|ref|ZP_14800493.1| arginine--tRNA ligase [Escherichia coli TW09109]
 gi|420309784|ref|ZP_14811728.1| arginine--tRNA ligase [Escherichia coli EC1738]
 gi|420315328|ref|ZP_14817211.1| arginine--tRNA ligase [Escherichia coli EC1734]
 gi|421812558|ref|ZP_16248305.1| arginine--tRNA ligase [Escherichia coli 8.0416]
 gi|421818592|ref|ZP_16254104.1| arginine--tRNA ligase [Escherichia coli 10.0821]
 gi|421821457|ref|ZP_16256911.1| arginine--tRNA ligase [Escherichia coli FRIK920]
 gi|421831100|ref|ZP_16266398.1| arginine--tRNA ligase [Escherichia coli PA7]
 gi|423711562|ref|ZP_17685871.1| arginine--tRNA ligase [Escherichia coli PA31]
 gi|424077717|ref|ZP_17814771.1| arginine--tRNA ligase [Escherichia coli FDA505]
 gi|424084094|ref|ZP_17820654.1| arginine--tRNA ligase [Escherichia coli FDA517]
 gi|424090513|ref|ZP_17826541.1| arginine--tRNA ligase [Escherichia coli FRIK1996]
 gi|424097039|ref|ZP_17832458.1| arginine--tRNA ligase [Escherichia coli FRIK1985]
 gi|424103377|ref|ZP_17838253.1| arginine--tRNA ligase [Escherichia coli FRIK1990]
 gi|424110100|ref|ZP_17844419.1| arginine--tRNA ligase [Escherichia coli 93-001]
 gi|424115806|ref|ZP_17849737.1| arginine--tRNA ligase [Escherichia coli PA3]
 gi|424122175|ref|ZP_17855588.1| arginine--tRNA ligase [Escherichia coli PA5]
 gi|424128300|ref|ZP_17861276.1| arginine--tRNA ligase [Escherichia coli PA9]
 gi|424134491|ref|ZP_17867037.1| arginine--tRNA ligase [Escherichia coli PA10]
 gi|424141130|ref|ZP_17873108.1| arginine--tRNA ligase [Escherichia coli PA14]
 gi|424147557|ref|ZP_17879018.1| arginine--tRNA ligase [Escherichia coli PA15]
 gi|424153490|ref|ZP_17884505.1| arginine--tRNA ligase [Escherichia coli PA24]
 gi|424235983|ref|ZP_17889956.1| arginine--tRNA ligase [Escherichia coli PA25]
 gi|424313583|ref|ZP_17895875.1| arginine--tRNA ligase [Escherichia coli PA28]
 gi|424449913|ref|ZP_17901687.1| arginine--tRNA ligase [Escherichia coli PA32]
 gi|424456082|ref|ZP_17907310.1| arginine--tRNA ligase [Escherichia coli PA33]
 gi|424462389|ref|ZP_17912959.1| arginine--tRNA ligase [Escherichia coli PA39]
 gi|424468787|ref|ZP_17918701.1| arginine--tRNA ligase [Escherichia coli PA41]
 gi|424475372|ref|ZP_17924781.1| arginine--tRNA ligase [Escherichia coli PA42]
 gi|424481124|ref|ZP_17930166.1| arginine--tRNA ligase [Escherichia coli TW07945]
 gi|424487292|ref|ZP_17935919.1| arginine--tRNA ligase [Escherichia coli TW09098]
 gi|424493702|ref|ZP_17941605.1| arginine--tRNA ligase [Escherichia coli TW09195]
 gi|424500556|ref|ZP_17947556.1| arginine--tRNA ligase [Escherichia coli EC4203]
 gi|424506711|ref|ZP_17953224.1| arginine--tRNA ligase [Escherichia coli EC4196]
 gi|424514198|ref|ZP_17958976.1| arginine--tRNA ligase [Escherichia coli TW14313]
 gi|424520489|ref|ZP_17964683.1| arginine--tRNA ligase [Escherichia coli TW14301]
 gi|424526397|ref|ZP_17970181.1| arginine--tRNA ligase [Escherichia coli EC4421]
 gi|424532562|ref|ZP_17975967.1| arginine--tRNA ligase [Escherichia coli EC4422]
 gi|424538564|ref|ZP_17981581.1| arginine--tRNA ligase [Escherichia coli EC4013]
 gi|424544531|ref|ZP_17987055.1| arginine--tRNA ligase [Escherichia coli EC4402]
 gi|424550796|ref|ZP_17992743.1| arginine--tRNA ligase [Escherichia coli EC4439]
 gi|424557042|ref|ZP_17998519.1| arginine--tRNA ligase [Escherichia coli EC4436]
 gi|424563390|ref|ZP_18004448.1| arginine--tRNA ligase [Escherichia coli EC4437]
 gi|424569463|ref|ZP_18010114.1| arginine--tRNA ligase [Escherichia coli EC4448]
 gi|424575589|ref|ZP_18015762.1| arginine--tRNA ligase [Escherichia coli EC1845]
 gi|424581459|ref|ZP_18021181.1| arginine--tRNA ligase [Escherichia coli EC1863]
 gi|425098295|ref|ZP_18501089.1| arginine--tRNA ligase [Escherichia coli 3.4870]
 gi|425104475|ref|ZP_18506840.1| arginine--tRNA ligase [Escherichia coli 5.2239]
 gi|425110305|ref|ZP_18512302.1| arginine--tRNA ligase [Escherichia coli 6.0172]
 gi|425126094|ref|ZP_18527358.1| arginine--tRNA ligase [Escherichia coli 8.0586]
 gi|425131950|ref|ZP_18532853.1| arginine--tRNA ligase [Escherichia coli 8.2524]
 gi|425138318|ref|ZP_18538787.1| arginine--tRNA ligase [Escherichia coli 10.0833]
 gi|425144277|ref|ZP_18544338.1| arginine--tRNA ligase [Escherichia coli 10.0869]
 gi|425150344|ref|ZP_18550025.1| arginine--tRNA ligase [Escherichia coli 88.0221]
 gi|425156190|ref|ZP_18555517.1| arginine--tRNA ligase [Escherichia coli PA34]
 gi|425168375|ref|ZP_18566921.1| arginine--tRNA ligase [Escherichia coli FDA507]
 gi|425174464|ref|ZP_18572635.1| arginine--tRNA ligase [Escherichia coli FDA504]
 gi|425180405|ref|ZP_18578185.1| arginine--tRNA ligase [Escherichia coli FRIK1999]
 gi|425186642|ref|ZP_18584001.1| arginine--tRNA ligase [Escherichia coli FRIK1997]
 gi|425193511|ref|ZP_18590360.1| arginine--tRNA ligase [Escherichia coli NE1487]
 gi|425199903|ref|ZP_18596220.1| arginine--tRNA ligase [Escherichia coli NE037]
 gi|425206349|ref|ZP_18602229.1| arginine--tRNA ligase [Escherichia coli FRIK2001]
 gi|425212085|ref|ZP_18607571.1| arginine--tRNA ligase [Escherichia coli PA4]
 gi|425218214|ref|ZP_18613260.1| arginine--tRNA ligase [Escherichia coli PA23]
 gi|425224730|ref|ZP_18619293.1| arginine--tRNA ligase [Escherichia coli PA49]
 gi|425230964|ref|ZP_18625092.1| arginine--tRNA ligase [Escherichia coli PA45]
 gi|425237114|ref|ZP_18630873.1| arginine--tRNA ligase [Escherichia coli TT12B]
 gi|425243214|ref|ZP_18636593.1| arginine--tRNA ligase [Escherichia coli MA6]
 gi|425255113|ref|ZP_18647705.1| arginine--tRNA ligase [Escherichia coli CB7326]
 gi|425261400|ref|ZP_18653487.1| arginine--tRNA ligase [Escherichia coli EC96038]
 gi|425294893|ref|ZP_18685177.1| arginine--tRNA ligase [Escherichia coli PA38]
 gi|425311580|ref|ZP_18700825.1| arginine--tRNA ligase [Escherichia coli EC1735]
 gi|425317507|ref|ZP_18706360.1| arginine--tRNA ligase [Escherichia coli EC1736]
 gi|425323612|ref|ZP_18712045.1| arginine--tRNA ligase [Escherichia coli EC1737]
 gi|425329775|ref|ZP_18717742.1| arginine--tRNA ligase [Escherichia coli EC1846]
 gi|425335942|ref|ZP_18723432.1| arginine--tRNA ligase [Escherichia coli EC1847]
 gi|425342367|ref|ZP_18729347.1| arginine--tRNA ligase [Escherichia coli EC1848]
 gi|425348178|ref|ZP_18734750.1| arginine--tRNA ligase [Escherichia coli EC1849]
 gi|425354479|ref|ZP_18740624.1| arginine--tRNA ligase [Escherichia coli EC1850]
 gi|425360451|ref|ZP_18746184.1| arginine--tRNA ligase [Escherichia coli EC1856]
 gi|425366577|ref|ZP_18751863.1| arginine--tRNA ligase [Escherichia coli EC1862]
 gi|425373012|ref|ZP_18757747.1| arginine--tRNA ligase [Escherichia coli EC1864]
 gi|425385836|ref|ZP_18769484.1| arginine--tRNA ligase [Escherichia coli EC1866]
 gi|425392524|ref|ZP_18775723.1| arginine--tRNA ligase [Escherichia coli EC1868]
 gi|425398679|ref|ZP_18781468.1| arginine--tRNA ligase [Escherichia coli EC1869]
 gi|425404712|ref|ZP_18787043.1| arginine--tRNA ligase [Escherichia coli EC1870]
 gi|425411276|ref|ZP_18793119.1| arginine--tRNA ligase [Escherichia coli NE098]
 gi|425417584|ref|ZP_18798929.1| arginine--tRNA ligase [Escherichia coli FRIK523]
 gi|425428838|ref|ZP_18809532.1| arginine--tRNA ligase [Escherichia coli 0.1304]
 gi|428947198|ref|ZP_19019585.1| arginine--tRNA ligase [Escherichia coli 88.1467]
 gi|428953434|ref|ZP_19025283.1| arginine--tRNA ligase [Escherichia coli 88.1042]
 gi|428959355|ref|ZP_19030735.1| arginine--tRNA ligase [Escherichia coli 89.0511]
 gi|428965808|ref|ZP_19036665.1| arginine--tRNA ligase [Escherichia coli 90.0091]
 gi|428971588|ref|ZP_19042007.1| arginine--tRNA ligase [Escherichia coli 90.0039]
 gi|428978198|ref|ZP_19048087.1| arginine--tRNA ligase [Escherichia coli 90.2281]
 gi|428983962|ref|ZP_19053417.1| arginine--tRNA ligase [Escherichia coli 93.0055]
 gi|428990181|ref|ZP_19059228.1| arginine--tRNA ligase [Escherichia coli 93.0056]
 gi|428995954|ref|ZP_19064635.1| arginine--tRNA ligase [Escherichia coli 94.0618]
 gi|429002077|ref|ZP_19070316.1| arginine--tRNA ligase [Escherichia coli 95.0183]
 gi|429008325|ref|ZP_19075927.1| arginine--tRNA ligase [Escherichia coli 95.1288]
 gi|429014812|ref|ZP_19081781.1| arginine--tRNA ligase [Escherichia coli 95.0943]
 gi|429020667|ref|ZP_19087242.1| arginine--tRNA ligase [Escherichia coli 96.0428]
 gi|429026727|ref|ZP_19092822.1| arginine--tRNA ligase [Escherichia coli 96.0427]
 gi|429032801|ref|ZP_19098407.1| arginine--tRNA ligase [Escherichia coli 96.0939]
 gi|429038946|ref|ZP_19104136.1| arginine--tRNA ligase [Escherichia coli 96.0932]
 gi|429044919|ref|ZP_19109686.1| arginine--tRNA ligase [Escherichia coli 96.0107]
 gi|429050429|ref|ZP_19115029.1| arginine--tRNA ligase [Escherichia coli 97.0003]
 gi|429055668|ref|ZP_19120060.1| arginine--tRNA ligase [Escherichia coli 97.1742]
 gi|429061312|ref|ZP_19125379.1| arginine--tRNA ligase [Escherichia coli 97.0007]
 gi|429067402|ref|ZP_19130948.1| arginine--tRNA ligase [Escherichia coli 99.0672]
 gi|429073407|ref|ZP_19136698.1| arginine--tRNA ligase [Escherichia coli 99.0678]
 gi|429078732|ref|ZP_19141896.1| arginine--tRNA ligase [Escherichia coli 99.0713]
 gi|429826652|ref|ZP_19357788.1| arginine--tRNA ligase [Escherichia coli 96.0109]
 gi|429832925|ref|ZP_19363405.1| arginine--tRNA ligase [Escherichia coli 97.0010]
 gi|444925092|ref|ZP_21244498.1| arginine--tRNA ligase [Escherichia coli 09BKT078844]
 gi|444930958|ref|ZP_21250042.1| arginine--tRNA ligase [Escherichia coli 99.0814]
 gi|444936239|ref|ZP_21255075.1| arginine--tRNA ligase [Escherichia coli 99.0815]
 gi|444941872|ref|ZP_21260445.1| arginine--tRNA ligase [Escherichia coli 99.0816]
 gi|444947373|ref|ZP_21265728.1| arginine--tRNA ligase [Escherichia coli 99.0839]
 gi|444953062|ref|ZP_21271203.1| arginine--tRNA ligase [Escherichia coli 99.0848]
 gi|444958567|ref|ZP_21276467.1| arginine--tRNA ligase [Escherichia coli 99.1753]
 gi|444963772|ref|ZP_21281431.1| arginine--tRNA ligase [Escherichia coli 99.1775]
 gi|444969615|ref|ZP_21287022.1| arginine--tRNA ligase [Escherichia coli 99.1793]
 gi|444980451|ref|ZP_21297394.1| arginine--tRNA ligase [Escherichia coli ATCC 700728]
 gi|444985773|ref|ZP_21302588.1| arginine--tRNA ligase [Escherichia coli PA11]
 gi|444991059|ref|ZP_21307741.1| arginine--tRNA ligase [Escherichia coli PA19]
 gi|444996271|ref|ZP_21312810.1| arginine--tRNA ligase [Escherichia coli PA13]
 gi|445001893|ref|ZP_21318311.1| arginine--tRNA ligase [Escherichia coli PA2]
 gi|445007356|ref|ZP_21323639.1| arginine--tRNA ligase [Escherichia coli PA47]
 gi|445012476|ref|ZP_21328616.1| arginine--tRNA ligase [Escherichia coli PA48]
 gi|445018210|ref|ZP_21334205.1| arginine--tRNA ligase [Escherichia coli PA8]
 gi|445023861|ref|ZP_21339719.1| arginine--tRNA ligase [Escherichia coli 7.1982]
 gi|445029102|ref|ZP_21344814.1| arginine--tRNA ligase [Escherichia coli 99.1781]
 gi|445034545|ref|ZP_21350107.1| arginine--tRNA ligase [Escherichia coli 99.1762]
 gi|445040262|ref|ZP_21355668.1| arginine--tRNA ligase [Escherichia coli PA35]
 gi|445045382|ref|ZP_21360674.1| arginine--tRNA ligase [Escherichia coli 3.4880]
 gi|445050980|ref|ZP_21366074.1| arginine--tRNA ligase [Escherichia coli 95.0083]
 gi|445056790|ref|ZP_21371679.1| arginine--tRNA ligase [Escherichia coli 99.0670]
 gi|452968369|ref|ZP_21966596.1| arginyl-tRNA ligase [Escherichia coli O157:H7 str. EC4009]
 gi|21542249|sp|Q8XCH2.1|SYR_ECO57 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|238065087|sp|B5YR22.1|SYR_ECO5E RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|13362054|dbj|BAB36009.1| arginine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768070|gb|EDU31914.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188017552|gb|EDU55674.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999443|gb|EDU68429.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355181|gb|EDU73600.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360270|gb|EDU78689.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189370702|gb|EDU89118.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189376028|gb|EDU94444.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208724896|gb|EDZ74603.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731065|gb|EDZ79754.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208738669|gb|EDZ86351.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209157319|gb|ACI34752.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209767330|gb|ACI81977.1| arginine tRNA synthetase [Escherichia coli]
 gi|209767332|gb|ACI81978.1| arginine tRNA synthetase [Escherichia coli]
 gi|209767336|gb|ACI81980.1| arginine tRNA synthetase [Escherichia coli]
 gi|254592900|gb|ACT72261.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|320188575|gb|EFW63237.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320641730|gb|EFX11118.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|326342254|gb|EGD66035.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343804|gb|EGD67566.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|377895334|gb|EHU59747.1| arginyl-tRNA synthetase [Escherichia coli DEC3A]
 gi|377895738|gb|EHU60149.1| arginyl-tRNA synthetase [Escherichia coli DEC3B]
 gi|377906697|gb|EHU70939.1| arginyl-tRNA synthetase [Escherichia coli DEC3C]
 gi|377912034|gb|EHU76199.1| arginyl-tRNA synthetase [Escherichia coli DEC3D]
 gi|377914002|gb|EHU78130.1| arginyl-tRNA synthetase [Escherichia coli DEC3E]
 gi|377928413|gb|EHU92324.1| arginyl-tRNA synthetase [Escherichia coli DEC4A]
 gi|377932986|gb|EHU96832.1| arginyl-tRNA synthetase [Escherichia coli DEC4B]
 gi|377944009|gb|EHV07718.1| arginyl-tRNA synthetase [Escherichia coli DEC4C]
 gi|377944825|gb|EHV08527.1| arginyl-tRNA synthetase [Escherichia coli DEC4D]
 gi|377950002|gb|EHV13633.1| arginyl-tRNA synthetase [Escherichia coli DEC4E]
 gi|377958950|gb|EHV22462.1| arginyl-tRNA synthetase [Escherichia coli DEC4F]
 gi|386796442|gb|AFJ29476.1| arginyl-tRNA synthetase [Escherichia coli Xuzhou21]
 gi|390644916|gb|EIN24105.1| arginine--tRNA ligase [Escherichia coli FDA517]
 gi|390645154|gb|EIN24337.1| arginine--tRNA ligase [Escherichia coli FRIK1996]
 gi|390645994|gb|EIN25132.1| arginine--tRNA ligase [Escherichia coli FDA505]
 gi|390663584|gb|EIN41080.1| arginine--tRNA ligase [Escherichia coli 93-001]
 gi|390664858|gb|EIN42191.1| arginine--tRNA ligase [Escherichia coli FRIK1985]
 gi|390666015|gb|EIN43221.1| arginine--tRNA ligase [Escherichia coli FRIK1990]
 gi|390681575|gb|EIN57368.1| arginine--tRNA ligase [Escherichia coli PA3]
 gi|390684618|gb|EIN60229.1| arginine--tRNA ligase [Escherichia coli PA5]
 gi|390685597|gb|EIN61067.1| arginine--tRNA ligase [Escherichia coli PA9]
 gi|390701446|gb|EIN75670.1| arginine--tRNA ligase [Escherichia coli PA10]
 gi|390703110|gb|EIN77161.1| arginine--tRNA ligase [Escherichia coli PA15]
 gi|390703795|gb|EIN77790.1| arginine--tRNA ligase [Escherichia coli PA14]
 gi|390715453|gb|EIN88298.1| arginine--tRNA ligase [Escherichia coli PA22]
 gi|390726838|gb|EIN99266.1| arginine--tRNA ligase [Escherichia coli PA25]
 gi|390727382|gb|EIN99799.1| arginine--tRNA ligase [Escherichia coli PA24]
 gi|390729430|gb|EIO01603.1| arginine--tRNA ligase [Escherichia coli PA28]
 gi|390745113|gb|EIO15933.1| arginine--tRNA ligase [Escherichia coli PA32]
 gi|390745954|gb|EIO16729.1| arginine--tRNA ligase [Escherichia coli PA31]
 gi|390747541|gb|EIO18094.1| arginine--tRNA ligase [Escherichia coli PA33]
 gi|390759422|gb|EIO28820.1| arginine--tRNA ligase [Escherichia coli PA40]
 gi|390769905|gb|EIO38801.1| arginine--tRNA ligase [Escherichia coli PA41]
 gi|390771343|gb|EIO40030.1| arginine--tRNA ligase [Escherichia coli PA39]
 gi|390771712|gb|EIO40367.1| arginine--tRNA ligase [Escherichia coli PA42]
 gi|390790983|gb|EIO58378.1| arginine--tRNA ligase [Escherichia coli TW10246]
 gi|390797041|gb|EIO64307.1| arginine--tRNA ligase [Escherichia coli TW07945]
 gi|390798422|gb|EIO65618.1| arginine--tRNA ligase [Escherichia coli TW11039]
 gi|390807930|gb|EIO74779.1| arginine--tRNA ligase [Escherichia coli TW09109]
 gi|390809743|gb|EIO76525.1| arginine--tRNA ligase [Escherichia coli TW09098]
 gi|390829292|gb|EIO94900.1| arginine--tRNA ligase [Escherichia coli EC4203]
 gi|390832314|gb|EIO97575.1| arginine--tRNA ligase [Escherichia coli TW09195]
 gi|390833897|gb|EIO98873.1| arginine--tRNA ligase [Escherichia coli EC4196]
 gi|390848990|gb|EIP12438.1| arginine--tRNA ligase [Escherichia coli TW14301]
 gi|390850657|gb|EIP14018.1| arginine--tRNA ligase [Escherichia coli TW14313]
 gi|390852156|gb|EIP15325.1| arginine--tRNA ligase [Escherichia coli EC4421]
 gi|390863651|gb|EIP25783.1| arginine--tRNA ligase [Escherichia coli EC4422]
 gi|390868011|gb|EIP29777.1| arginine--tRNA ligase [Escherichia coli EC4013]
 gi|390873659|gb|EIP34840.1| arginine--tRNA ligase [Escherichia coli EC4402]
 gi|390880471|gb|EIP41147.1| arginine--tRNA ligase [Escherichia coli EC4439]
 gi|390885070|gb|EIP45319.1| arginine--tRNA ligase [Escherichia coli EC4436]
 gi|390896573|gb|EIP55959.1| arginine--tRNA ligase [Escherichia coli EC4437]
 gi|390900566|gb|EIP59785.1| arginine--tRNA ligase [Escherichia coli EC4448]
 gi|390901231|gb|EIP60415.1| arginine--tRNA ligase [Escherichia coli EC1738]
 gi|390909029|gb|EIP67830.1| arginine--tRNA ligase [Escherichia coli EC1734]
 gi|390921270|gb|EIP79493.1| arginine--tRNA ligase [Escherichia coli EC1863]
 gi|390922149|gb|EIP80257.1| arginine--tRNA ligase [Escherichia coli EC1845]
 gi|408067142|gb|EKH01585.1| arginine--tRNA ligase [Escherichia coli PA7]
 gi|408076253|gb|EKH10481.1| arginine--tRNA ligase [Escherichia coli PA34]
 gi|408077974|gb|EKH12155.1| arginine--tRNA ligase [Escherichia coli FRIK920]
 gi|408084497|gb|EKH18269.1| arginine--tRNA ligase [Escherichia coli FDA507]
 gi|408093262|gb|EKH26361.1| arginine--tRNA ligase [Escherichia coli FDA504]
 gi|408099132|gb|EKH31786.1| arginine--tRNA ligase [Escherichia coli FRIK1999]
 gi|408106947|gb|EKH39038.1| arginine--tRNA ligase [Escherichia coli FRIK1997]
 gi|408110687|gb|EKH42474.1| arginine--tRNA ligase [Escherichia coli NE1487]
 gi|408117537|gb|EKH48716.1| arginine--tRNA ligase [Escherichia coli NE037]
 gi|408123617|gb|EKH54356.1| arginine--tRNA ligase [Escherichia coli FRIK2001]
 gi|408129591|gb|EKH59810.1| arginine--tRNA ligase [Escherichia coli PA4]
 gi|408141059|gb|EKH70539.1| arginine--tRNA ligase [Escherichia coli PA23]
 gi|408142681|gb|EKH72030.1| arginine--tRNA ligase [Escherichia coli PA49]
 gi|408147867|gb|EKH76776.1| arginine--tRNA ligase [Escherichia coli PA45]
 gi|408156212|gb|EKH84419.1| arginine--tRNA ligase [Escherichia coli TT12B]
 gi|408163066|gb|EKH90947.1| arginine--tRNA ligase [Escherichia coli MA6]
 gi|408176681|gb|EKI03518.1| arginine--tRNA ligase [Escherichia coli CB7326]
 gi|408183630|gb|EKI10055.1| arginine--tRNA ligase [Escherichia coli EC96038]
 gi|408220412|gb|EKI44468.1| arginine--tRNA ligase [Escherichia coli PA38]
 gi|408229661|gb|EKI53088.1| arginine--tRNA ligase [Escherichia coli EC1735]
 gi|408241113|gb|EKI63763.1| arginine--tRNA ligase [Escherichia coli EC1736]
 gi|408245188|gb|EKI67581.1| arginine--tRNA ligase [Escherichia coli EC1737]
 gi|408249567|gb|EKI71497.1| arginine--tRNA ligase [Escherichia coli EC1846]
 gi|408260053|gb|EKI81188.1| arginine--tRNA ligase [Escherichia coli EC1847]
 gi|408262035|gb|EKI82988.1| arginine--tRNA ligase [Escherichia coli EC1848]
 gi|408267685|gb|EKI88132.1| arginine--tRNA ligase [Escherichia coli EC1849]
 gi|408277602|gb|EKI97389.1| arginine--tRNA ligase [Escherichia coli EC1850]
 gi|408279925|gb|EKI99508.1| arginine--tRNA ligase [Escherichia coli EC1856]
 gi|408291575|gb|EKJ10172.1| arginine--tRNA ligase [Escherichia coli EC1862]
 gi|408293928|gb|EKJ12349.1| arginine--tRNA ligase [Escherichia coli EC1864]
 gi|408310745|gb|EKJ27786.1| arginine--tRNA ligase [Escherichia coli EC1868]
 gi|408311401|gb|EKJ28411.1| arginine--tRNA ligase [Escherichia coli EC1866]
 gi|408323639|gb|EKJ39601.1| arginine--tRNA ligase [Escherichia coli EC1869]
 gi|408328080|gb|EKJ43697.1| arginine--tRNA ligase [Escherichia coli NE098]
 gi|408329019|gb|EKJ44558.1| arginine--tRNA ligase [Escherichia coli EC1870]
 gi|408339117|gb|EKJ53737.1| arginine--tRNA ligase [Escherichia coli FRIK523]
 gi|408348781|gb|EKJ62862.1| arginine--tRNA ligase [Escherichia coli 0.1304]
 gi|408551695|gb|EKK28933.1| arginine--tRNA ligase [Escherichia coli 5.2239]
 gi|408552598|gb|EKK29770.1| arginine--tRNA ligase [Escherichia coli 3.4870]
 gi|408553168|gb|EKK30299.1| arginine--tRNA ligase [Escherichia coli 6.0172]
 gi|408574373|gb|EKK50150.1| arginine--tRNA ligase [Escherichia coli 8.0586]
 gi|408582490|gb|EKK57705.1| arginine--tRNA ligase [Escherichia coli 10.0833]
 gi|408583156|gb|EKK58334.1| arginine--tRNA ligase [Escherichia coli 8.2524]
 gi|408594738|gb|EKK69019.1| arginine--tRNA ligase [Escherichia coli 10.0869]
 gi|408598302|gb|EKK72261.1| arginine--tRNA ligase [Escherichia coli 88.0221]
 gi|408602338|gb|EKK76059.1| arginine--tRNA ligase [Escherichia coli 8.0416]
 gi|408613692|gb|EKK86979.1| arginine--tRNA ligase [Escherichia coli 10.0821]
 gi|427207730|gb|EKV77898.1| arginine--tRNA ligase [Escherichia coli 88.1042]
 gi|427209391|gb|EKV79430.1| arginine--tRNA ligase [Escherichia coli 89.0511]
 gi|427210665|gb|EKV80520.1| arginine--tRNA ligase [Escherichia coli 88.1467]
 gi|427226380|gb|EKV94970.1| arginine--tRNA ligase [Escherichia coli 90.2281]
 gi|427226697|gb|EKV95286.1| arginine--tRNA ligase [Escherichia coli 90.0091]
 gi|427229555|gb|EKV97869.1| arginine--tRNA ligase [Escherichia coli 90.0039]
 gi|427244862|gb|EKW12171.1| arginine--tRNA ligase [Escherichia coli 93.0056]
 gi|427245426|gb|EKW12710.1| arginine--tRNA ligase [Escherichia coli 93.0055]
 gi|427247719|gb|EKW14771.1| arginine--tRNA ligase [Escherichia coli 94.0618]
 gi|427263540|gb|EKW29298.1| arginine--tRNA ligase [Escherichia coli 95.0943]
 gi|427264120|gb|EKW29811.1| arginine--tRNA ligase [Escherichia coli 95.0183]
 gi|427266363|gb|EKW31812.1| arginine--tRNA ligase [Escherichia coli 95.1288]
 gi|427278651|gb|EKW43107.1| arginine--tRNA ligase [Escherichia coli 96.0428]
 gi|427282586|gb|EKW46831.1| arginine--tRNA ligase [Escherichia coli 96.0427]
 gi|427285163|gb|EKW49166.1| arginine--tRNA ligase [Escherichia coli 96.0939]
 gi|427294400|gb|EKW57585.1| arginine--tRNA ligase [Escherichia coli 96.0932]
 gi|427301498|gb|EKW64360.1| arginine--tRNA ligase [Escherichia coli 96.0107]
 gi|427301848|gb|EKW64702.1| arginine--tRNA ligase [Escherichia coli 97.0003]
 gi|427315572|gb|EKW77564.1| arginine--tRNA ligase [Escherichia coli 97.1742]
 gi|427317855|gb|EKW79746.1| arginine--tRNA ligase [Escherichia coli 97.0007]
 gi|427322460|gb|EKW84093.1| arginine--tRNA ligase [Escherichia coli 99.0672]
 gi|427330193|gb|EKW91471.1| arginine--tRNA ligase [Escherichia coli 99.0678]
 gi|427330589|gb|EKW91859.1| arginine--tRNA ligase [Escherichia coli 99.0713]
 gi|429255269|gb|EKY39604.1| arginine--tRNA ligase [Escherichia coli 96.0109]
 gi|429257041|gb|EKY41144.1| arginine--tRNA ligase [Escherichia coli 97.0010]
 gi|444539608|gb|ELV19332.1| arginine--tRNA ligase [Escherichia coli 99.0814]
 gi|444542840|gb|ELV22176.1| arginine--tRNA ligase [Escherichia coli 09BKT078844]
 gi|444548682|gb|ELV27050.1| arginine--tRNA ligase [Escherichia coli 99.0815]
 gi|444559765|gb|ELV36966.1| arginine--tRNA ligase [Escherichia coli 99.0839]
 gi|444561474|gb|ELV38587.1| arginine--tRNA ligase [Escherichia coli 99.0816]
 gi|444565929|gb|ELV42772.1| arginine--tRNA ligase [Escherichia coli 99.0848]
 gi|444575370|gb|ELV51612.1| arginine--tRNA ligase [Escherichia coli 99.1753]
 gi|444579603|gb|ELV55589.1| arginine--tRNA ligase [Escherichia coli 99.1775]
 gi|444581755|gb|ELV57593.1| arginine--tRNA ligase [Escherichia coli 99.1793]
 gi|444595353|gb|ELV70457.1| arginine--tRNA ligase [Escherichia coli PA11]
 gi|444595533|gb|ELV70635.1| arginine--tRNA ligase [Escherichia coli ATCC 700728]
 gi|444609180|gb|ELV83639.1| arginine--tRNA ligase [Escherichia coli PA19]
 gi|444609562|gb|ELV84020.1| arginine--tRNA ligase [Escherichia coli PA13]
 gi|444617452|gb|ELV91568.1| arginine--tRNA ligase [Escherichia coli PA2]
 gi|444626118|gb|ELV99916.1| arginine--tRNA ligase [Escherichia coli PA48]
 gi|444626361|gb|ELW00157.1| arginine--tRNA ligase [Escherichia coli PA47]
 gi|444631922|gb|ELW05505.1| arginine--tRNA ligase [Escherichia coli PA8]
 gi|444641213|gb|ELW14452.1| arginine--tRNA ligase [Escherichia coli 7.1982]
 gi|444644148|gb|ELW17272.1| arginine--tRNA ligase [Escherichia coli 99.1781]
 gi|444647421|gb|ELW20395.1| arginine--tRNA ligase [Escherichia coli 99.1762]
 gi|444656033|gb|ELW28569.1| arginine--tRNA ligase [Escherichia coli PA35]
 gi|444662848|gb|ELW35100.1| arginine--tRNA ligase [Escherichia coli 3.4880]
 gi|444667657|gb|ELW39691.1| arginine--tRNA ligase [Escherichia coli 95.0083]
 gi|444671043|gb|ELW42882.1| arginine--tRNA ligase [Escherichia coli 99.0670]
          Length = 577

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|152999024|ref|YP_001364705.1| arginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160873617|ref|YP_001552933.1| arginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217971704|ref|YP_002356455.1| arginyl-tRNA synthetase [Shewanella baltica OS223]
 gi|373951138|ref|ZP_09611099.1| Arginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|378706857|ref|YP_005271751.1| arginyl-tRNA synthetase [Shewanella baltica OS678]
 gi|386323043|ref|YP_006019160.1| arginyl-tRNA synthetase [Shewanella baltica BA175]
 gi|418025707|ref|ZP_12664684.1| Arginyl-tRNA synthetase [Shewanella baltica OS625]
 gi|166232840|sp|A6WIK3.1|SYR_SHEB8 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|189083547|sp|A9KYS9.1|SYR_SHEB9 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|254782981|sp|B8E6G9.1|SYR_SHEB2 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|151363642|gb|ABS06642.1| arginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160859139|gb|ABX47673.1| arginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217496839|gb|ACK45032.1| arginyl-tRNA synthetase [Shewanella baltica OS223]
 gi|315265846|gb|ADT92699.1| arginyl-tRNA synthetase [Shewanella baltica OS678]
 gi|333817188|gb|AEG09854.1| Arginyl-tRNA synthetase [Shewanella baltica BA175]
 gi|353534968|gb|EHC04533.1| Arginyl-tRNA synthetase [Shewanella baltica OS625]
 gi|373887738|gb|EHQ16630.1| Arginyl-tRNA synthetase [Shewanella baltica OS183]
          Length = 581

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/566 (41%), Positives = 336/566 (59%), Gaps = 41/566 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K+       KNP ++AQ I       + T P+ A V  K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASAYVA-KVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++       K+   ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEKAQLELSDLENFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  + + ++ +GFG + GED 
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVREDMS-LEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTRSG  VKL +LL+E   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRSGGVVKLVDLLEEANVRALELVRSKN--PDMDEVTLTEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I +   +   DL  A     + LEHE
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKR--VTDLDLSQA----KIVLEHE 495

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            KE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D + +    
Sbjct: 496  KEKDLGNKLAQFGEILSRVVDKGQPHVLCAYLYELAGAFSSFYEACPVLAADNDAQ---- 551

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RLLLA+ TA+ ++K  ++L I T
Sbjct: 552  KNSRLLLAQLTARTLQKGLNLLGIET 577



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 194/322 (60%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K+       KNP ++AQ I       + T P+ A V  K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASAYVA-KVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++       K+   ++DL+ FY+ +K 
Sbjct: 145 SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEKAQLELSDLENFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265 SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSNVLKADRVLYFVDLR 346



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 194/322 (60%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K+       KNP ++AQ I       + T P+ A V  K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASAYVA-KVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++       K+   ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEKAQLELSDLENFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLR 346


>gi|416238622|ref|ZP_11631502.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326567939|gb|EGE18036.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 575

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 328/564 (58%), Gaps = 35/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----MNPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +         ++        +   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82   FINIFLKNEWISRHANQANISRTLGVNTAQNDTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+ +K  +
Sbjct: 142  VVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYRAAKHAY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDDTMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA
Sbjct: 261  YNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
               R     AD ++  TD  Q +H +      +KAG + P++  M+   FG++LG+D K 
Sbjct: 321  AAYRYHTLHADRVILFTDARQTLHAQQAWLITRKAGFV-PDEFVMEHFTFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TVKL++LLDE + R+   +K KN   +L+  E     +AVA G +KY+DLS N
Sbjct: 380  FKTRTGGTVKLADLLDEAIERATTLIKQKN--PDLSAEEKRAVVEAVAIGAVKYSDLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            RN DYVF +D ML   GNTA Y+ YAYTRI SI   AG++  D+        + +  +KE
Sbjct: 438  RNTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFARAGLDMADI-----GGEIVIHEDKE 492

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  +VL+LV +D   H LC+YL++++  FS FY+ C  +  D + K     T
Sbjct: 493  RALAVKLLQFEEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEACPILSSDDKTK-----T 547

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I+T
Sbjct: 548  SRLRLAALTAKTLKQGLQLLGIKT 571



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/328 (39%), Positives = 183/328 (55%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----MNPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +         ++        +   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82  FINIFLKNEWISRHANQANISRTLGVNTAQNDTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+ +K  +
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYRAAKHAY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDDTMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA
Sbjct: 261 YNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
              R     AD ++  TD R      QA
Sbjct: 321 AAYRYHTLHADRVILFTDARQTLHAQQA 348



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/320 (39%), Positives = 181/320 (56%), Gaps = 22/320 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----MNPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +         ++        +   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82   FINIFLKNEWISRHANQANISRTLGVNTAQNDTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+ +K  +
Sbjct: 142  VVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYRAAKHAY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDDTMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA
Sbjct: 261  YNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
               R     AD ++  TD R
Sbjct: 321  AAYRYHTLHADRVILFTDAR 340


>gi|386704397|ref|YP_006168244.1| arginyl-tRNA synthetase [Escherichia coli P12b]
 gi|383102565|gb|AFG40074.1| Arginyl-tRNA synthetase [Escherichia coli P12b]
          Length = 563

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 67

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 183

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 300

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 301  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 359

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 360  GKDGKPFKTRAGGTVKLADLLDEALERARRLVSEKN--PDMPADELEKLANAVGIGAVKY 417

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 418  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 473

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 474  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 531

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 532  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 559



 Score =  237 bits (605), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 21  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 67

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 125 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 183

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 244 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 300

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 301 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 336



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 67

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 183

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 243

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 300

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 301  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 333


>gi|269103063|ref|ZP_06155760.1| arginyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
            102761]
 gi|268162961|gb|EEZ41457.1| arginyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
            102761]
          Length = 576

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 334/564 (59%), Gaps = 34/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +          N  L ++ +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVID--------NLDLGEMAEKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL++ +   + ++ + +        K+  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLNKQWLAARAEEALNDDRLSVAKEKEQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA++  K  D    S  I+DL+ FY+ESK  +
Sbjct: 142  VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMVRKEQDGSDVSMNISDLEGFYRESKVLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED  F + A   VV LQ  D    + W+ + +++ +  Q+ YDRLNV+LT+    GES 
Sbjct: 202  DEDPEFAETARNYVVRLQSGDEYCHEKWKQLVEITLKQNQRNYDRLNVSLTDENVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y + +  +V  L++KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262  YNEMLPGIVADLKEKGLAVEDDGAVVVFLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H  +     +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEKLHADRVLYFIDSRQHQHLMMAWSIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   +++KN   EL+  E +E    VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAQERANKLIEEKN--PELSAEEKAEIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI + AG+   DL     + P+ +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFKRAGVELADL-----THPIIITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  QALLSKLLQFEEAVQTVAREGHPHVMCNYLFELAGTFSSFYEACPILNAEEE-----VKQ 548

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  D+L I+T
Sbjct: 549  SRLKLAHLTAKTIKQGLDLLGIKT 572



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/414 (34%), Positives = 228/414 (55%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +          N  L ++ +K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKQLG-----TNPREFAQKVID--------NLDLGEMAEKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL++ +   + ++ + +        K+  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLNKQWLAARAEEALNDDRLSVAKEKEQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA++  K  D    S  I+DL+ FY+ESK  +
Sbjct: 142 VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMVRKEQDGSDVSMNISDLEGFYRESKVLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED  F + A   VV LQ  D    + W+ + +++ +  Q+ YDRLNV+LT+    GES 
Sbjct: 202 DEDPEFAETARNYVVRLQSGDEYCHEKWKQLVEITLKQNQRNYDRLNVSLTDENVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y + +  +V  L++KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262 YNEMLPGIVADLKEKGLAVEDDGAVVVFLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E+  AD ++Y  D R +  ++ A +   K   +  S S +       +     P 
Sbjct: 322 AKYRYEKLHADRVLYFIDSRQHQHLMMAWSIVRKAGYVPESVSLEHHAFGMMLGKDGRPF 381

Query: 472 RDRMSVRDYLSDVFTHAVQVA-------FPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A + A        PEL  ++ A +A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAQERANKLIEEKNPELSAEEKAEIANTVAMAAVKYADL 435



 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 197/326 (60%), Gaps = 21/326 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +          N  L ++ +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVID--------NLDLGEMAEKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL++ +   + ++ + +        K+  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLNKQWLAARAEEALNDDRLSVAKEKEQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA++  K  D    S  I+DL+ FY+ESK  +
Sbjct: 142  VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMVRKEQDGSDVSMNISDLEGFYRESKVLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED  F + A   VV LQ  D    + W+ + +++ +  Q+ YDRLNV+LT+    GES 
Sbjct: 202  DEDPEFAETARNYVVRLQSGDEYCHEKWKQLVEITLKQNQRNYDRLNVSLTDENVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y + +  +V  L++KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262  YNEMLPGIVADLKEKGLAVEDDGAVVVFLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVL 1457
             + R E+  AD ++Y  D R +  ++
Sbjct: 322  AKYRYEKLHADRVLYFIDSRQHQHLM 347


>gi|425422719|ref|ZP_18803887.1| arginine--tRNA ligase [Escherichia coli 0.1288]
 gi|408344036|gb|EKJ58424.1| arginine--tRNA ligase [Escherichia coli 0.1288]
          Length = 577

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDDEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVSTP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|375261583|ref|YP_005020753.1| arginyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
 gi|397658691|ref|YP_006499393.1| arginyl-tRNA synthetase [Klebsiella oxytoca E718]
 gi|402840483|ref|ZP_10888947.1| arginine--tRNA ligase [Klebsiella sp. OBRC7]
 gi|365911061|gb|AEX06514.1| arginyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
 gi|394346957|gb|AFN33078.1| Arginyl-tRNA synthetase [Klebsiella oxytoca E718]
 gi|402285700|gb|EJU34181.1| arginine--tRNA ligase [Klebsiella sp. OBRC7]
          Length = 577

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYENLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESALAAA----PVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  E+E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  ITEEREAQLAARLLQFEETLTVVAREGTPHVMCSYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 192/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYENLHADRVLYYIDSRQHQHLMQA 348



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYENLHADRVLYYIDSRQHQHLMQ 347


>gi|329296274|ref|ZP_08253610.1| arginyl-tRNA synthetase [Plautia stali symbiont]
          Length = 576

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 237/611 (38%), Positives = 347/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+ VA     D    V  + +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQAM-VAAGAPADCEPQVRQSAKV---QFGDYQANGIMAVAKKLGQ--- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD----- 589
                  + + +A  V   L     LA +  K+++A PGF+N+FL R +  +Q        
Sbjct: 54   ------VPRQLAEQVVQHL----DLAGIASKVDIAGPGFINIFLDRQWLAQQAAQALQLP 103

Query: 590  -IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + V+ V P T      +++D+S+PN+AKEMHVGH+RSTIIGD + R  E+LGH V+R N
Sbjct: 104  RLGVSEVTPQT------IVIDYSAPNVAKEMHVGHVRSTIIGDAVVRTQEFLGHHVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ +  ++  +   +ADL+AFY+E+K+ +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLEKQQNEH-HEDIALADLEAFYREAKRTYDEDEAFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W+ + D++    Q++YDRLNVTLT +   GES Y   +  ++  L +KG
Sbjct: 217  LQGGDEYCRAMWKKLVDITMSQNQQVYDRLNVTLTRKDVMGESLYNDMLPGIIADLREKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVTSEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLHADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H +      +KAG + P    ++   FG++LG+D + FKTRSG T+KLS+
Sbjct: 334  LYYIDSRQHQHLQQAWTIVRKAGYV-PESVPLEHHAFGMMLGKDGRPFKTRSGGTIKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   E++  EL E  + V  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAVERAHALVSEKN--PEMSAAELKELVEVVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ R AGI ++ LR       + L  E+E  LA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVLSVFRKAGIEADSLR-----GDIILTDEREALLATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V RD   H +C YLYD++  FS FY++C  +  + E     V   RL LA  TAK +
Sbjct: 506  ITQVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAEEE----NVRNSRLQLAALTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIKT 572



 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 157/446 (35%), Positives = 234/446 (52%), Gaps = 49/446 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+ VA     D    V  + +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQAM-VAAGAPADCEPQVRQSAKV---QFGDYQANGIMAVAKKLGQ--- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD----- 199
                 + + +A  V   L     LA +  K+++A PGF+N+FL R +  +Q        
Sbjct: 54  ------VPRQLAEQVVQHL----DLAGIASKVDIAGPGFINIFLDRQWLAQQAAQALQLP 103

Query: 200 -IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + V+ V P T      +++D+S+PN+AKEMHVGH+RSTIIGD + R  E+LGH V+R N
Sbjct: 104 RLGVSEVTPQT------IVIDYSAPNVAKEMHVGHVRSTIIGDAVVRTQEFLGHHVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ +  ++  +   +ADL+AFY+E+K+ +DEDE F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLEKQQNEH-HEDIALADLEAFYREAKRTYDEDEAFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W+ + D++    Q++YDRLNVTLT +   GES Y   +  ++  L +KG
Sbjct: 217 LQGGDEYCRAMWKKLVDITMSQNQQVYDRLNVTLTRKDVMGESLYNDMLPGIIADLREKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVTSEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLHADRV 333

Query: 428 VYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM----NVPVRDRMSVRDYLSD 483
           +Y  D R  HQ LQ      +K G    S          M      P + R      LSD
Sbjct: 334 LYYIDSRQ-HQHLQQAWTIVRKAGYVPESVPLEHHAFGMMLGKDGRPFKTRSGGTIKLSD 392

Query: 484 VFTHAVQVAFPELGDKTASVASTNEK 509
           +   AV+ A   + +K   +++   K
Sbjct: 393 LLDEAVERAHALVSEKNPEMSAAELK 418



 Score =  230 bits (586), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 143/374 (38%), Positives = 211/374 (56%), Gaps = 45/374 (12%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+ VA     D    V  + +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQAM-VAAGAPADCEPQVRQSAKV---QFGDYQANGIMAVAKKLGQ--- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD----- 1216
                  + + +A  V   L     LA +  K+++A PGF+N+FL R +  +Q        
Sbjct: 54   ------VPRQLAEQVVQHL----DLAGIASKVDIAGPGFINIFLDRQWLAQQAAQALQLP 103

Query: 1217 -IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + V+ V P T      +++D+S+PN+AKEMHVGH+RSTIIGD + R  E+LGH V+R N
Sbjct: 104  RLGVSEVTPQT------IVIDYSAPNVAKEMHVGHVRSTIIGDAVVRTQEFLGHHVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ +  ++  +   +ADL+AFY+E+K+ +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLEKQQNEH-HEDIALADLEAFYREAKRTYDEDEAFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W+ + D++    Q++YDRLNVTLT +   GES Y   +  ++  L +KG
Sbjct: 217  LQGGDEYCRAMWKKLVDITMSQNQQVYDRLNVTLTRKDVMGESLYNDMLPGIIADLREKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVTSEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLHADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R  HQ LQ
Sbjct: 334  LYYIDSRQ-HQHLQ 346


>gi|168762327|ref|ZP_02787334.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|217328684|ref|ZP_03444765.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|189367334|gb|EDU85750.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|217318031|gb|EEC26458.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
          Length = 577

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDHLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDHLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDHLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|432882116|ref|ZP_20098196.1| arginyl-tRNA synthetase [Escherichia coli KTE154]
 gi|431411622|gb|ELG94733.1| arginyl-tRNA synthetase [Escherichia coli KTE154]
          Length = 577

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHLQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHLQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHLQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|419863950|ref|ZP_14386455.1| arginyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
 gi|388341519|gb|EIL07629.1| arginyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
          Length = 577

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IRKDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|82776478|ref|YP_402827.1| arginyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|309789294|ref|ZP_07683885.1| arginyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|109895035|sp|Q32H69.1|SYR_SHIDS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|81240626|gb|ABB61336.1| arginine tRNA synthetase [Shigella dysenteriae Sd197]
 gi|308922829|gb|EFP68345.1| arginyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 577

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 326/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   A+ ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHAERVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   A+ ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHAERVLYYIDSRQHQHLMQAWA 350



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   A+ ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHAERVLYYIDSRQHQHLMQ 347


>gi|323454276|gb|EGB10146.1| hypothetical protein AURANDRAFT_22930 [Aureococcus anophagefferens]
          Length = 644

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 253/581 (43%), Positives = 331/581 (56%), Gaps = 42/581 (7%)

Query: 500  TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 559
            T   A+ N     +FGDFQCN A+AL K     G  + P D+A  I       L  +  +
Sbjct: 69   TERYAALNVATKKEFGDFQCNAALALSKKL---GAPRPPRDVAADI----VRALEADAGV 121

Query: 560  AKVID-KIEVAKPGFVNVFLSRVYAGEQIKDIIVN-----GVQPPTLNKKLRVLVDFSSP 613
            A V+   +E+A PGFVN+ LS  Y       +  +     GV  P       V+VD+SSP
Sbjct: 122  ASVVSFPLEIAGPGFVNLRLSDDYLARTAAAMAADADGRCGV--PRAAAPRTVVVDYSSP 179

Query: 614  NIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP-DYL 672
            NIAKEMHVGHLRST+IGD ++  LE+ GHDV R+NHVGDWGTQFGML+AHL D  P    
Sbjct: 180  NIAKEMHVGHLRSTVIGDALANCLEFAGHDVRRVNHVGDWGTQFGMLLAHLDDVAPVGGE 239

Query: 673  TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 732
              +P + DL AFYKE+K RFD DE FK RA   VVALQ  D     AW  +C  SR +F 
Sbjct: 240  NDAPELGDLVAFYKEAKARFDADESFKLRARDNVVALQGGDARSLAAWRRLCAASRVEFD 299

Query: 733  KIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMT 787
             IYDRL V  L E GESFY   +E  V  L    L E  +G  ++W     E RG+ PM 
Sbjct: 300  AIYDRLGVAGLEEVGESFYNDRLEATVAALGD--LAEPSEGATVVWPPGDPETRGN-PMI 356

Query: 788  IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKT 847
            + KSDGGF Y T+DLAA   R  + KAD ++YVTD GQG HF  + E AK+A ++  +  
Sbjct: 357  VRKSDGGFLYATTDLAAAAYRCGDLKADRVLYVTDAGQGPHFAAVFEAAKRAALVAGDAL 416

Query: 848  RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTE------- 898
             ++ V FG+V GED KKF TRSG+TV+L +LLDE  RR+L  L+ +  +R+ E       
Sbjct: 417  -LEHVPFGLVRGEDGKKFATRSGETVRLKDLLDEAERRALADLRARRDDRNAEDSSDASL 475

Query: 899  -LTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI 957
                 EL+   +AV  G +KYADLS NR  +Y FS+ KML   GNTA Y+LY+Y RI  I
Sbjct: 476  DFDDAELAALARAVGIGAVKYADLSLNRESNYKFSYGKMLALTGNTAPYMLYSYARINGI 535

Query: 958  ARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017
             R A   +E    AA    V  + + E ALA+ L  +   L+ + RDL  + LC+YL+++
Sbjct: 536  RRRA---AERGDAAAGDAAVVFDDDAERALARHLALLAPTLVNLERDLRPNALCDYLFEL 592

Query: 1018 STAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
            +  F+ FY++C       +     +   R  L  ATA  +K
Sbjct: 593  AQIFNRFYESCPVT----QAPTPELAASRAKLCAATAGALK 629



 Score =  262 bits (670), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/335 (47%), Positives = 194/335 (57%), Gaps = 24/335 (7%)

Query: 110 TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 169
           T   A+ N     +FGDFQCN A+AL K     G  + P D+A  I       L  +  +
Sbjct: 69  TERYAALNVATKKEFGDFQCNAALALSKKL---GAPRPPRDVAADI----VRALEADAGV 121

Query: 170 AKVID-KIEVAKPGFVNVFLSRVYAGEQIKDIIVN-----GVQPPTLNKKLRVLVDFSSP 223
           A V+   +E+A PGFVN+ LS  Y       +  +     GV  P       V+VD+SSP
Sbjct: 122 ASVVSFPLEIAGPGFVNLRLSDDYLARTAAAMAADADGRCGV--PRAAAPRTVVVDYSSP 179

Query: 224 NIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP-DYL 282
           NIAKEMHVGHLRST+IGD ++  LE+ GHDV R+NHVGDWGTQFGML+AHL D  P    
Sbjct: 180 NIAKEMHVGHLRSTVIGDALANCLEFAGHDVRRVNHVGDWGTQFGMLLAHLDDVAPVGGE 239

Query: 283 TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 342
             +P + DL AFYKE+K RFD DE FK RA   VVALQ  D     AW  +C  SR +F 
Sbjct: 240 NDAPELGDLVAFYKEAKARFDADESFKLRARDNVVALQGGDARSLAAWRRLCAASRVEFD 299

Query: 343 KIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMT 397
            IYDRL V  L E GESFY   +E  V  L    L E  +G  ++W     E RG+ PM 
Sbjct: 300 AIYDRLGVAGLEEVGESFYNDRLEATVAALGD--LAEPSEGATVVWPPGDPETRGN-PMI 356

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           + KSDGGF Y T+DLAA   R  + KAD ++YVTD
Sbjct: 357 VRKSDGGFLYATTDLAAAAYRCGDLKADRVLYVTD 391



 Score =  262 bits (670), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/335 (47%), Positives = 194/335 (57%), Gaps = 24/335 (7%)

Query: 1127 TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 1186
            T   A+ N     +FGDFQCN A+AL K     G  + P D+A  I       L  +  +
Sbjct: 69   TERYAALNVATKKEFGDFQCNAALALSKKL---GAPRPPRDVAADI----VRALEADAGV 121

Query: 1187 AKVID-KIEVAKPGFVNVFLSRVYAGEQIKDIIVN-----GVQPPTLNKKLRVLVDFSSP 1240
            A V+   +E+A PGFVN+ LS  Y       +  +     GV  P       V+VD+SSP
Sbjct: 122  ASVVSFPLEIAGPGFVNLRLSDDYLARTAAAMAADADGRCGV--PRAAAPRTVVVDYSSP 179

Query: 1241 NIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP-DYL 1299
            NIAKEMHVGHLRST+IGD ++  LE+ GHDV R+NHVGDWGTQFGML+AHL D  P    
Sbjct: 180  NIAKEMHVGHLRSTVIGDALANCLEFAGHDVRRVNHVGDWGTQFGMLLAHLDDVAPVGGE 239

Query: 1300 TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 1359
              +P + DL AFYKE+K RFD DE FK RA   VVALQ  D     AW  +C  SR +F 
Sbjct: 240  NDAPELGDLVAFYKEAKARFDADESFKLRARDNVVALQGGDARSLAAWRRLCAASRVEFD 299

Query: 1360 KIYDRLNVT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMT 1414
             IYDRL V  L E GESFY   +E  V  L    L E  +G  ++W     E RG+ PM 
Sbjct: 300  AIYDRLGVAGLEEVGESFYNDRLEATVAALGD--LAEPSEGATVVWPPGDPETRGN-PMI 356

Query: 1415 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            + KSDGGF Y T+DLAA   R  + KAD ++YVTD
Sbjct: 357  VRKSDGGFLYATTDLAAAAYRCGDLKADRVLYVTD 391


>gi|357501013|ref|XP_003620795.1| Arginyl-tRNA synthetase [Medicago truncatula]
 gi|355495810|gb|AES77013.1| Arginyl-tRNA synthetase [Medicago truncatula]
          Length = 728

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/430 (48%), Positives = 289/430 (67%), Gaps = 10/430 (2%)

Query: 605  RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV-RLNHVGDWGTQFGMLIAH 663
            R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   ++V R NHVGDWGTQFGMLI +
Sbjct: 218  RAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVELVTRRNHVGDWGTQFGMLIEY 277

Query: 664  LQDKFPDYLTKS-PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEM 722
            L +KFP+    S   I DLQAFYK SK RFD+D  FK RA Q VV LQ  D  Y+KAW+ 
Sbjct: 278  LFEKFPNQEDVSETAIGDLQAFYKASKVRFDDDPEFKLRAQQAVVLLQSGDTRYRKAWQQ 337

Query: 723  ICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG 782
            ICD+SR +F K+Y RL V L E GESFY  ++  ++  L+K GL+E  DG ++++ E   
Sbjct: 338  ICDISRAEFDKVYQRLGVQLEEMGESFYNPYIPGVIEKLDKLGLVEDSDGARVIYVEGV- 396

Query: 783  SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGIL 842
            +IP+  VK DGG+ Y ++DLA++  R+ +EK +WIVYVTD+GQ  HF +L +  ++AG L
Sbjct: 397  NIPIIAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTDIGQQQHFDMLYKAFRRAGWL 456

Query: 843  NPNKT---RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTEL 899
              N+    +   +GFG+VLG D K+F++RS + V+L +LLDE  RR    L +++   + 
Sbjct: 457  PRNENAYPKCTHIGFGLVLGNDGKRFRSRSSEVVRLVDLLDEAKRRCKTALLERDTTNDW 516

Query: 900  TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIAR 959
            +  E+    +A+ YG +KYADL  NR  +Y F FD+ML D+GNTAVYLLYA+ RI SI R
Sbjct: 517  SEEEIERTSEAIGYGAVKYADLKINRLTNYKFDFDQMLSDKGNTAVYLLYAHARICSIIR 576

Query: 960  TAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDIST 1019
             +G + E+++   ++  + L+HE E  L   +L+  +V      +L    LC+YLY ++ 
Sbjct: 577  KSGKDIEEVK---KNGVIVLDHESERLLGLHILQFPEVFEEACSNLLPSVLCDYLYTLAE 633

Query: 1020 AFS-EFYDNC 1028
             F+ +FY NC
Sbjct: 634  IFTKKFYSNC 643



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/220 (56%), Positives = 161/220 (73%), Gaps = 3/220 (1%)

Query: 215 RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV-RLNHVGDWGTQFGMLIAH 273
           R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   ++V R NHVGDWGTQFGMLI +
Sbjct: 218 RAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVELVTRRNHVGDWGTQFGMLIEY 277

Query: 274 LQDKFPDYLTKS-PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEM 332
           L +KFP+    S   I DLQAFYK SK RFD+D  FK RA Q VV LQ  D  Y+KAW+ 
Sbjct: 278 LFEKFPNQEDVSETAIGDLQAFYKASKVRFDDDPEFKLRAQQAVVLLQSGDTRYRKAWQQ 337

Query: 333 ICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG 392
           ICD+SR +F K+Y RL V L E GESFY  ++  ++  L+K GL+E  DG ++++ E   
Sbjct: 338 ICDISRAEFDKVYQRLGVQLEEMGESFYNPYIPGVIEKLDKLGLVEDSDGARVIYVEGV- 396

Query: 393 SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           +IP+  VK DGG+ Y ++DLA++  R+ +EK +WIVYVTD
Sbjct: 397 NIPIIAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTD 436



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/220 (56%), Positives = 161/220 (73%), Gaps = 3/220 (1%)

Query: 1232 RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV-RLNHVGDWGTQFGMLIAH 1290
            R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+   ++V R NHVGDWGTQFGMLI +
Sbjct: 218  RAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVELVTRRNHVGDWGTQFGMLIEY 277

Query: 1291 LQDKFPDYLTKS-PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEM 1349
            L +KFP+    S   I DLQAFYK SK RFD+D  FK RA Q VV LQ  D  Y+KAW+ 
Sbjct: 278  LFEKFPNQEDVSETAIGDLQAFYKASKVRFDDDPEFKLRAQQAVVLLQSGDTRYRKAWQQ 337

Query: 1350 ICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG 1409
            ICD+SR +F K+Y RL V L E GESFY  ++  ++  L+K GL+E  DG ++++ E   
Sbjct: 338  ICDISRAEFDKVYQRLGVQLEEMGESFYNPYIPGVIEKLDKLGLVEDSDGARVIYVEGV- 396

Query: 1410 SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            +IP+  VK DGG+ Y ++DLA++  R+ +EK +WIVYVTD
Sbjct: 397  NIPIIAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTD 436


>gi|300951499|ref|ZP_07165334.1| arginyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300956611|ref|ZP_07168890.1| arginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300316593|gb|EFJ66377.1| arginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300449249|gb|EFK12869.1| arginyl-tRNA synthetase [Escherichia coli MS 116-1]
          Length = 577

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/572 (40%), Positives = 326/572 (56%), Gaps = 46/572 (8%)

Query: 511  VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 570
            VH FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A 
Sbjct: 34   VH-FGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAG 79

Query: 571  PGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 627
            PGF+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRST
Sbjct: 80   PGFINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRST 136

Query: 628  IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 687
            IIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY++
Sbjct: 137  IIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRD 195

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE--- 744
            +KK +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT    
Sbjct: 196  AKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDV 255

Query: 745  RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFT 796
             GES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ 
Sbjct: 256  MGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYL 312

Query: 797  YDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGV 856
            Y T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG+
Sbjct: 313  YTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGM 371

Query: 857  VLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCI 916
            +LG+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +
Sbjct: 372  MLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAV 429

Query: 917  KYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP 976
            KYADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    P
Sbjct: 430  KYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----P 485

Query: 977  VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE 1036
            V +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E
Sbjct: 486  VIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE 545

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 V   RL LA+ TAK +K   D L I T
Sbjct: 546  ----EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (604), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 194/338 (57%), Gaps = 35/338 (10%)

Query: 121 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 180
           VH FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A 
Sbjct: 34  VH-FGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAG 79

Query: 181 PGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 237
           PGF+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRST
Sbjct: 80  PGFINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRST 136

Query: 238 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 297
           IIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY++
Sbjct: 137 IIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRD 195

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE--- 354
           +KK +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT    
Sbjct: 196 AKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDV 255

Query: 355 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFT 406
            GES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ 
Sbjct: 256 MGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYL 312

Query: 407 YDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           Y T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 313 YTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/335 (40%), Positives = 192/335 (57%), Gaps = 35/335 (10%)

Query: 1138 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 1197
            VH FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A 
Sbjct: 34   VH-FGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAG 79

Query: 1198 PGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 1254
            PGF+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRST
Sbjct: 80   PGFINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRST 136

Query: 1255 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 1314
            IIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY++
Sbjct: 137  IIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRD 195

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE--- 1371
            +KK +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT    
Sbjct: 196  AKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDV 255

Query: 1372 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFT 1423
             GES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ 
Sbjct: 256  MGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYL 312

Query: 1424 YDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            Y T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 313  YTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|416337518|ref|ZP_11673881.1| Arginyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320194410|gb|EFW69041.1| Arginyl-tRNA synthetase [Escherichia coli WV_060327]
          Length = 577

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + + +         L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVLTYL--------DLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (604), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + + +         L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVLTYL--------DLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + + +         L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVLTYL--------DLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|193069866|ref|ZP_03050815.1| arginyl-tRNA synthetase [Escherichia coli E110019]
 gi|192956766|gb|EDV87220.1| arginyl-tRNA synthetase [Escherichia coli E110019]
          Length = 577

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/567 (40%), Positives = 322/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLALEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 190/333 (57%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 188/330 (56%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYESLHADRVLYYIDSRQHQHLMQ 347


>gi|425162702|ref|ZP_18561641.1| arginine--tRNA ligase [Escherichia coli FDA506]
 gi|408082027|gb|EKH16019.1| arginine--tRNA ligase [Escherichia coli FDA506]
          Length = 563

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 67

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 183

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 243

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 300

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 301  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 359

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 360  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 417

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 418  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 473

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 474  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 531

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 532  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 559



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 21  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 67

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 125 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 183

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 243

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 244 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 300

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 301 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 336



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 21   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 67

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 68   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 124

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 125  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 183

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 184  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 243

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 244  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 300

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 301  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 333


>gi|416217322|ref|ZP_11624271.1| arginyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326561173|gb|EGE11538.1| arginyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 575

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 328/564 (58%), Gaps = 35/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +         ++        +   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82   FINIFLKNEWISRHANQANISRTLGVNTAQNDTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+ +K  +
Sbjct: 142  VVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYRAAKHAY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDDTMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA
Sbjct: 261  YNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
               R     AD ++  TD  Q +H +      +KAG + P++  M+   FG++LG+D K 
Sbjct: 321  AAYRYHTLHADRVILFTDARQTLHAQQAWLITRKAGFV-PDEFVMEHFTFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TVKL++LLDE + R+   +K KN   +L+  E     +AVA G +KY+DLS N
Sbjct: 380  FKTRTGGTVKLADLLDEAIERATTLIKQKN--PDLSAEEKRAVVEAVAIGAVKYSDLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            RN DYVF +D ML   GNTA Y+ YAYTRI SI   AG++  D+        + +  +KE
Sbjct: 438  RNTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFARAGLDMADI-----GGEIVIHEDKE 492

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  +VL+LV +D   H LC+YL++++  FS FY+ C  +  D + K     T
Sbjct: 493  RALAVKLLQFEEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEACPILSSDDKTK-----T 547

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I+T
Sbjct: 548  SRLRLAALTAKTLKQGLQLLGIKT 571



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/328 (39%), Positives = 183/328 (55%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +         ++        +   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82  FINIFLKNEWISRHANQANISRTLGVNTAQNDTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+ +K  +
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYRAAKHAY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDDTMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA
Sbjct: 261 YNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
              R     AD ++  TD R      QA
Sbjct: 321 AAYRYHTLHADRVILFTDARQTLHAQQA 348



 Score =  223 bits (568), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/320 (39%), Positives = 181/320 (56%), Gaps = 22/320 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +         ++        +   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82   FINIFLKNEWISRHANQANISRTLGVNTAQNDTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+ +K  +
Sbjct: 142  VVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYRAAKHAY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDDTMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA
Sbjct: 261  YNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
               R     AD ++  TD R
Sbjct: 321  AAYRYHTLHADRVILFTDAR 340


>gi|15802288|ref|NP_288313.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|12515938|gb|AAG56866.1|AE005410_2 arginine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
          Length = 577

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IXKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+    L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEXTLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IXKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IXKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|410635616|ref|ZP_11346224.1| arginyl-tRNA synthetase [Glaciecola lipolytica E3]
 gi|410144699|dbj|GAC13429.1| arginyl-tRNA synthetase [Glaciecola lipolytica E3]
          Length = 578

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/603 (38%), Positives = 342/603 (56%), Gaps = 38/603 (6%)

Query: 475  MSVRDYLSDVFTHA-VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            M++   L D F  A + +  PE  +  A +A +      +FG++Q N AMAL KI K K 
Sbjct: 1    MNLHTVLLDRFKAALINIGAPE--NSPAPLAKSTRA---EFGEYQFNGAMALAKILKQK- 54

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
                P DIA+ I + V         L  + +K+EVA PGF+N+ L   + GEQ+ +   +
Sbjct: 55   ----PRDIAEKIVAAV--------ELDDIAEKLEVAGPGFINIHLKSQWLGEQLLEAYND 102

Query: 594  GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
                    +   ++VD+SSPN+AKEMHVGHLRSTIIGD + + LE++GH+V+R NH+GDW
Sbjct: 103  ERLGVEKQQSQTIVVDYSSPNLAKEMHVGHLRSTIIGDAVVKALEFMGHNVIRQNHMGDW 162

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGML+AHL DK          ++DL+ FY+E+K RFDE++ F  RA Q VV LQ  D
Sbjct: 163  GTQFGMLLAHLSDKIASNQVAETALSDLEDFYREAKVRFDEEDGFADRARQYVVKLQGGD 222

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELD 770
                  W+   D+S +  +++Y +LNV+LT +   GES Y   +   V  L +KG+   D
Sbjct: 223  AHCLSLWQDFIDISIKHSEEVYKKLNVSLTRKDIMGESAYNDDLLPTVNELVQKGIAVED 282

Query: 771  DGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQ 825
             G  +++      +D       I KS GG+ Y T+D AAIR R ++  AD  +  TD  Q
Sbjct: 283  QGALVVFIQELANKDGEPAVYIIQKSGGGYLYSTTDQAAIRYRCQKLGADRTLIFTDARQ 342

Query: 826  GVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRR 885
             +HF+  E  A+KAG ++  ++  +   FG++LG+D K FKTRSG TVKL++LLDE + R
Sbjct: 343  ALHFKQTEIVARKAGFISEQQS-YEHCPFGMMLGQDGKPFKTRSGSTVKLADLLDEAVER 401

Query: 886  SLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
            +   + D  R ++ +  E  +  + +    +KYADLS NR  DY+F++D ML   GNTA 
Sbjct: 402  AEKLMAD--RKSDFSEAERQQVAEKIGISAVKYADLSKNRTTDYIFNWDSMLSFEGNTAP 459

Query: 946  YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
            Y+ YAYTR   I + AG NS+       +  + L+  +E  LA  LL+  + L L+T + 
Sbjct: 460  YIQYAYTRANKIFKDAGANSDSF-----TASIELQSPQERVLAVKLLQYVEALNLLTAEA 514

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILN 1065
              H LC YLY+++++F  FY+ C   +     + K     R+ L   TAK +K   ++L 
Sbjct: 515  TPHVLCSYLYELASSFMSFYEACPIFKAGVSNEQK---NSRITLTGLTAKTIKSGLELLG 571

Query: 1066 IRT 1068
            I T
Sbjct: 572  IST 574



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 142/359 (39%), Positives = 204/359 (56%), Gaps = 27/359 (7%)

Query: 85  MSVRDYLSDVFTHA-VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           M++   L D F  A + +  PE  +  A +A +      +FG++Q N AMAL KI K K 
Sbjct: 1   MNLHTVLLDRFKAALINIGAPE--NSPAPLAKSTRA---EFGEYQFNGAMALAKILKQK- 54

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
               P DIA+ I + V         L  + +K+EVA PGF+N+ L   + GEQ+ +   +
Sbjct: 55  ----PRDIAEKIVAAV--------ELDDIAEKLEVAGPGFINIHLKSQWLGEQLLEAYND 102

Query: 204 GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
                   +   ++VD+SSPN+AKEMHVGHLRSTIIGD + + LE++GH+V+R NH+GDW
Sbjct: 103 ERLGVEKQQSQTIVVDYSSPNLAKEMHVGHLRSTIIGDAVVKALEFMGHNVIRQNHMGDW 162

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           GTQFGML+AHL DK          ++DL+ FY+E+K RFDE++ F  RA Q VV LQ  D
Sbjct: 163 GTQFGMLLAHLSDKIASNQVAETALSDLEDFYREAKVRFDEEDGFADRARQYVVKLQGGD 222

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELD 380
                 W+   D+S +  +++Y +LNV+LT +   GES Y   +   V  L +KG+   D
Sbjct: 223 AHCLSLWQDFIDISIKHSEEVYKKLNVSLTRKDIMGESAYNDDLLPTVNELVQKGIAVED 282

Query: 381 DGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
            G  +++      +D       I KS GG+ Y T+D AAIR R ++  AD  +  TD R
Sbjct: 283 QGALVVFIQELANKDGEPAVYIIQKSGGGYLYSTTDQAAIRYRCQKLGADRTLIFTDAR 341



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 142/359 (39%), Positives = 204/359 (56%), Gaps = 27/359 (7%)

Query: 1102 MSVRDYLSDVFTHA-VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            M++   L D F  A + +  PE  +  A +A +      +FG++Q N AMAL KI K K 
Sbjct: 1    MNLHTVLLDRFKAALINIGAPE--NSPAPLAKSTRA---EFGEYQFNGAMALAKILKQK- 54

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
                P DIA+ I + V         L  + +K+EVA PGF+N+ L   + GEQ+ +   +
Sbjct: 55   ----PRDIAEKIVAAV--------ELDDIAEKLEVAGPGFINIHLKSQWLGEQLLEAYND 102

Query: 1221 GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
                    +   ++VD+SSPN+AKEMHVGHLRSTIIGD + + LE++GH+V+R NH+GDW
Sbjct: 103  ERLGVEKQQSQTIVVDYSSPNLAKEMHVGHLRSTIIGDAVVKALEFMGHNVIRQNHMGDW 162

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            GTQFGML+AHL DK          ++DL+ FY+E+K RFDE++ F  RA Q VV LQ  D
Sbjct: 163  GTQFGMLLAHLSDKIASNQVAETALSDLEDFYREAKVRFDEEDGFADRARQYVVKLQGGD 222

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELD 1397
                  W+   D+S +  +++Y +LNV+LT +   GES Y   +   V  L +KG+   D
Sbjct: 223  AHCLSLWQDFIDISIKHSEEVYKKLNVSLTRKDIMGESAYNDDLLPTVNELVQKGIAVED 282

Query: 1398 DGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             G  +++      +D       I KS GG+ Y T+D AAIR R ++  AD  +  TD R
Sbjct: 283  QGALVVFIQELANKDGEPAVYIIQKSGGGYLYSTTDQAAIRYRCQKLGADRTLIFTDAR 341


>gi|422829280|ref|ZP_16877447.1| arginyl-tRNA synthetase [Escherichia coli B093]
 gi|371610013|gb|EHN98545.1| arginyl-tRNA synthetase [Escherichia coli B093]
          Length = 577

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MGPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (603), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MGPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MGPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|416892926|ref|ZP_11924250.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
 gi|347814624|gb|EGY31273.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
          Length = 577

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/606 (39%), Positives = 345/606 (56%), Gaps = 45/606 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+    A+  A    G  +   A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQSILSEKIKQAMLAA----GADSQCEALVRQSGKVQFGDYQANGIMPAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ + +           L  + +K E+A PGF+N+FL   +  E I     N 
Sbjct: 53   -INPREFAQLVLA--------KAELQDITEKTEIAGPGFINIFLKDGWLAENIG----NA 99

Query: 595  VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
            V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHV
Sbjct: 100  VKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHV 159

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIA+L+ K  +       + DL+AFY+ +KK +DED IF ++A   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMENEHASEMELCDLEAFYRAAKKHYDEDPIFAEKARNYVVKLQ 218

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 767
              D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL 
Sbjct: 219  SGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLA 278

Query: 768  ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              DDG  +++      +D GS+ + + K DGGF Y T+D+AA + R E  KA+  +  +D
Sbjct: 279  VEDDGAWVVYLDEFKNKDGGSMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSD 338

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q  H +      +KAG + P+  +++   FG++LG+D K FKTRSGDTVKL++LLDE 
Sbjct: 339  TRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGKDGKPFKTRSGDTVKLADLLDEA 397

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            + R+   +  K+  T L+  E ++  +AV  G +KYADLS NR  DYVF +D ML   GN
Sbjct: 398  IERAGVLISQKS--TALSDQEKADVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLSFEGN 455

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA Y+ YAYTRI SI   + I   ++  A     +S+  EKE ALA  LL+  + + +V 
Sbjct: 456  TAPYMQYAYTRIRSIFNRSQIALSEVEQA----QLSITDEKERALAIKLLQFEEAIQIVA 511

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
            +D   H LC YLY+++  FS FY++C  +  + +     V   RL LA  T + +K+   
Sbjct: 512  KDGTPHVLCTYLYELAGVFSSFYEHCPILNNEDQ----QVKLSRLKLALLTERTLKQGLG 567

Query: 1063 ILNIRT 1068
            +L I+T
Sbjct: 568  LLGIKT 573



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/370 (39%), Positives = 206/370 (55%), Gaps = 34/370 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+    A+  A    G  +   A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQSILSEKIKQAMLAA----GADSQCEALVRQSGKVQFGDYQANGIMPAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ + +           L  + +K E+A PGF+N+FL   +  E I     N 
Sbjct: 53  -INPREFAQLVLA--------KAELQDITEKTEIAGPGFINIFLKDGWLAENIG----NA 99

Query: 205 VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
           V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHV
Sbjct: 100 VKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHV 159

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGMLIA+L+ K  +       + DL+AFY+ +KK +DED IF ++A   VV LQ
Sbjct: 160 GDWGTQFGMLIAYLE-KMENEHASEMELCDLEAFYRAAKKHYDEDPIFAEKARNYVVKLQ 218

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 377
             D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL 
Sbjct: 219 SGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLA 278

Query: 378 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             DDG  +++      +D GS+ + + K DGGF Y T+D+AA + R E  KA+  +  +D
Sbjct: 279 VEDDGAWVVYLDEFKNKDGGSMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSD 338

Query: 433 HRSYHQVLQA 442
            R    + QA
Sbjct: 339 TRQSQHMQQA 348



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/369 (39%), Positives = 205/369 (55%), Gaps = 34/369 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+    A+  A    G  +   A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQSILSEKIKQAMLAA----GADSQCEALVRQSGKVQFGDYQANGIMPAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ + +           L  + +K E+A PGF+N+FL   +  E I     N 
Sbjct: 53   -INPREFAQLVLA--------KAELQDITEKTEIAGPGFINIFLKDGWLAENIG----NA 99

Query: 1222 VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
            V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHV
Sbjct: 100  VKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHV 159

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLIA+L+ K  +       + DL+AFY+ +KK +DED IF ++A   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMENEHASEMELCDLEAFYRAAKKHYDEDPIFAEKARNYVVKLQ 218

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 1394
              D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL 
Sbjct: 219  SGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLA 278

Query: 1395 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              DDG  +++      +D GS+ + + K DGGF Y T+D+AA + R E  KA+  +  +D
Sbjct: 279  VEDDGAWVVYLDEFKNKDGGSMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSD 338

Query: 1450 HRSYHQVLQ 1458
             R    + Q
Sbjct: 339  TRQSQHMQQ 347


>gi|34497417|ref|NP_901632.1| arginyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|39932057|sp|Q7NWM1.1|SYR_CHRVO RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|34103272|gb|AAQ59634.1| arginyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 572

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 237/575 (41%), Positives = 327/575 (56%), Gaps = 59/575 (10%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K  K      NP  +A+ + + +         LA + DK+E+A PG
Sbjct: 34   EFGDYQANGVMGAAKALK-----TNPRALAEKVVAAL--------DLAGIADKVEIAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L+  Y   + +  + +   G+ P    K LRV+V++SSPN+AKEMHVGHLRS+II
Sbjct: 81   FINIHLAPEYLARRSEAALKDDKLGIAPV---KPLRVMVEYSSPNLAKEMHVGHLRSSII 137

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ-----AF 684
            GD ++R++EY+GHDVVR NHVGDWGTQFGML+A+L +      T+    ADLQ      F
Sbjct: 138  GDALARVMEYVGHDVVRANHVGDWGTQFGMLVAYLVE------TRHAGDADLQLSDLETF 191

Query: 685  YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 744
            Y+ +K RFDE E F   A   VV LQ  D +  K W    DVS +  + +Y++LNV L  
Sbjct: 192  YRNAKIRFDESEDFANTARDYVVKLQGGDEEVLKLWRQFVDVSLKHCEDVYEKLNVGLKR 251

Query: 745  ---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW------GEDRGSIPMTIV--KSDG 793
               RGES Y   +  +V  L +KGLL  DDG ++++       ED+   PM ++  K DG
Sbjct: 252  EHVRGESSYNDDLPVIVQELREKGLLTEDDGAQVVFLDEFRTQEDK---PMGVIVQKKDG 308

Query: 794  GFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
            GF Y T+D+ A+R R  E K D ++YV D  Q  HF  +    +KAG   P   +++ VG
Sbjct: 309  GFIYTTTDIGAVRYRHRELKLDRVIYVVDARQSQHFAQMFTICRKAG-FAPEAMKLEHVG 367

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAY 913
            FGV++G+D K FKTRSG TVKL ELL+E   R+   + +KN   +L+  +  E   AV  
Sbjct: 368  FGVMMGDDGKPFKTRSGGTVKLIELLNEAEERAYALVSEKN--PDLSDAQKREIANAVGI 425

Query: 914  GCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQ 973
            G +KYADLS NR  DY+F++D ML   GNTA YL YAYTR+ S+ R A    ED    A+
Sbjct: 426  GAVKYADLSKNRMSDYIFNWDTMLAFEGNTAPYLQYAYTRVQSVFRKA----EDYDANAR 481

Query: 974  STPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK 1033
               + +    E  LA  L +  D L  V      H+L  YLY I+T FS FY+ C  ++ 
Sbjct: 482  ---IVITEPAEKQLAAALAQFEDTLNSVVEGCYPHYLSLYLYQIATLFSRFYEACPILKS 538

Query: 1034 DAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            + E     V   RL LA  TAK ++   D+L I+ 
Sbjct: 539  EGE-----VRASRLQLAALTAKTLRTGLDLLGIKV 568



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/338 (41%), Positives = 195/338 (57%), Gaps = 44/338 (13%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K  K      NP  +A+ + + +         LA + DK+E+A PG
Sbjct: 34  EFGDYQANGVMGAAKALK-----TNPRALAEKVVAAL--------DLAGIADKVEIAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L+  Y   + +  + +   G+ P    K LRV+V++SSPN+AKEMHVGHLRS+II
Sbjct: 81  FINIHLAPEYLARRSEAALKDDKLGIAPV---KPLRVMVEYSSPNLAKEMHVGHLRSSII 137

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ-----AF 294
           GD ++R++EY+GHDVVR NHVGDWGTQFGML+A+L +      T+    ADLQ      F
Sbjct: 138 GDALARVMEYVGHDVVRANHVGDWGTQFGMLVAYLVE------TRHAGDADLQLSDLETF 191

Query: 295 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 354
           Y+ +K RFDE E F   A   VV LQ  D +  K W    DVS +  + +Y++LNV L  
Sbjct: 192 YRNAKIRFDESEDFANTARDYVVKLQGGDEEVLKLWRQFVDVSLKHCEDVYEKLNVGLKR 251

Query: 355 ---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW------GEDRGSIPMTIV--KSDG 403
              RGES Y   +  +V  L +KGLL  DDG ++++       ED+   PM ++  K DG
Sbjct: 252 EHVRGESSYNDDLPVIVQELREKGLLTEDDGAQVVFLDEFRTQEDK---PMGVIVQKKDG 308

Query: 404 GFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 441
           GF Y T+D+ A+R R  E K D ++YV D R      Q
Sbjct: 309 GFIYTTTDIGAVRYRHRELKLDRVIYVVDARQSQHFAQ 346



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/338 (41%), Positives = 195/338 (57%), Gaps = 44/338 (13%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K  K      NP  +A+ + + +         LA + DK+E+A PG
Sbjct: 34   EFGDYQANGVMGAAKALK-----TNPRALAEKVVAAL--------DLAGIADKVEIAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L+  Y   + +  + +   G+ P    K LRV+V++SSPN+AKEMHVGHLRS+II
Sbjct: 81   FINIHLAPEYLARRSEAALKDDKLGIAPV---KPLRVMVEYSSPNLAKEMHVGHLRSSII 137

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ-----AF 1311
            GD ++R++EY+GHDVVR NHVGDWGTQFGML+A+L +      T+    ADLQ      F
Sbjct: 138  GDALARVMEYVGHDVVRANHVGDWGTQFGMLVAYLVE------TRHAGDADLQLSDLETF 191

Query: 1312 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 1371
            Y+ +K RFDE E F   A   VV LQ  D +  K W    DVS +  + +Y++LNV L  
Sbjct: 192  YRNAKIRFDESEDFANTARDYVVKLQGGDEEVLKLWRQFVDVSLKHCEDVYEKLNVGLKR 251

Query: 1372 ---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW------GEDRGSIPMTIV--KSDG 1420
               RGES Y   +  +V  L +KGLL  DDG ++++       ED+   PM ++  K DG
Sbjct: 252  EHVRGESSYNDDLPVIVQELREKGLLTEDDGAQVVFLDEFRTQEDK---PMGVIVQKKDG 308

Query: 1421 GFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            GF Y T+D+ A+R R  E K D ++YV D R      Q
Sbjct: 309  GFIYTTTDIGAVRYRHRELKLDRVIYVVDARQSQHFAQ 346


>gi|383936969|ref|ZP_09990385.1| arginyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
 gi|383701950|dbj|GAB60476.1| arginyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
          Length = 579

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/596 (39%), Positives = 344/596 (57%), Gaps = 35/596 (5%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  + T   Q AF  LG    + A+       +FGD+Q N AMA  K+ K      NP  
Sbjct: 3    IKQLLTEKTQSAFVALGLPADTNAAVTVSTRPEFGDYQINGAMAAAKLLK-----TNPRQ 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPT 599
            +A+        +L    +LA +  K E+A PGF+NV L + +   Q++     N +    
Sbjct: 58   LAE--------QLVQQLNLAGIASKTEIAGPGFINVTLDKSWLAAQLQQATTDNRLGVSA 109

Query: 600  LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
             N    V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDWGTQFGM
Sbjct: 110  NNTPQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDWGTQFGM 169

Query: 660  LIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 718
            LIAHL+DK    +  +S  +ADL+ FY+E+KKRFD++  F  ++   VV LQ  D   +K
Sbjct: 170  LIAHLEDKLAAGIDLESVALADLEDFYREAKKRFDDEAGFADKSRDYVVKLQSGDAHCQK 229

Query: 719  AWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
             W++  D S +  +++Y++LNVTL+    + ES Y   ++ +V  L+ K L   D G  +
Sbjct: 230  LWQLFIDTSVKHSEEVYEKLNVTLSHADIKPESAYNSMLQGIVDDLKAKELAVEDQGALV 289

Query: 776  MWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            ++ +   D+   P   +  K+ GGF Y T+DLAA + R  E  AD IV  TD  Q +HF+
Sbjct: 290  VFLQELADKEGNPSAFIVQKTGGGFLYSTTDLAACQYRSHELNADRIVIFTDARQALHFK 349

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
             +E  A+KAG L  + T  D   FG ++GED K FKTR+G TVKL+ELL+E + R+   +
Sbjct: 350  QVELVARKAGYLR-DATTYDHCPFGTMMGEDGKPFKTRTGGTVKLAELLEEAVVRAKAVV 408

Query: 891  KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            ++K   ++L+  E++E  + V  G +K+ADLS NR  DY+FS+D ML   G TA YL YA
Sbjct: 409  QEK--ASDLSDNEIAEVARKVGIGAVKFADLSKNRTSDYIFSWDAMLSFEGATAPYLQYA 466

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            YTR+ SI R A I          S  + +E E+E  LA  LLR  + L  V +D   + L
Sbjct: 467  YTRVRSILRRAEI------AEGFSAALLIEQEQEKQLAVKLLRFEEALQQVMKDAQPNLL 520

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            C YLY++++ +  FY+ C  ++   E    T    RL+L+  T+K++K+  D+L I
Sbjct: 521  CNYLYELASLYMAFYEACPILKDGVE---PTQRDSRLMLSIFTSKLLKQGLDLLGI 573



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 139/354 (39%), Positives = 201/354 (56%), Gaps = 23/354 (6%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  + T   Q AF  LG    + A+       +FGD+Q N AMA  K+ K      NP  
Sbjct: 3   IKQLLTEKTQSAFVALGLPADTNAAVTVSTRPEFGDYQINGAMAAAKLLK-----TNPRQ 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPT 209
           +A+        +L    +LA +  K E+A PGF+NV L + +   Q++     N +    
Sbjct: 58  LAE--------QLVQQLNLAGIASKTEIAGPGFINVTLDKSWLAAQLQQATTDNRLGVSA 109

Query: 210 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
            N    V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDWGTQFGM
Sbjct: 110 NNTPQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDWGTQFGM 169

Query: 270 LIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 328
           LIAHL+DK    +  +S  +ADL+ FY+E+KKRFD++  F  ++   VV LQ  D   +K
Sbjct: 170 LIAHLEDKLAAGIDLESVALADLEDFYREAKKRFDDEAGFADKSRDYVVKLQSGDAHCQK 229

Query: 329 AWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
            W++  D S +  +++Y++LNVTL+    + ES Y   ++ +V  L+ K L   D G  +
Sbjct: 230 LWQLFIDTSVKHSEEVYEKLNVTLSHADIKPESAYNSMLQGIVDDLKAKELAVEDQGALV 289

Query: 386 MWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
           ++ +   D+   P   +  K+ GGF Y T+DLAA + R  E  AD IV  TD R
Sbjct: 290 VFLQELADKEGNPSAFIVQKTGGGFLYSTTDLAACQYRSHELNADRIVIFTDAR 343



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 139/354 (39%), Positives = 201/354 (56%), Gaps = 23/354 (6%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  + T   Q AF  LG    + A+       +FGD+Q N AMA  K+ K      NP  
Sbjct: 3    IKQLLTEKTQSAFVALGLPADTNAAVTVSTRPEFGDYQINGAMAAAKLLK-----TNPRQ 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPT 1226
            +A+        +L    +LA +  K E+A PGF+NV L + +   Q++     N +    
Sbjct: 58   LAE--------QLVQQLNLAGIASKTEIAGPGFINVTLDKSWLAAQLQQATTDNRLGVSA 109

Query: 1227 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
             N    V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDWGTQFGM
Sbjct: 110  NNTPQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDWGTQFGM 169

Query: 1287 LIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 1345
            LIAHL+DK    +  +S  +ADL+ FY+E+KKRFD++  F  ++   VV LQ  D   +K
Sbjct: 170  LIAHLEDKLAAGIDLESVALADLEDFYREAKKRFDDEAGFADKSRDYVVKLQSGDAHCQK 229

Query: 1346 AWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
             W++  D S +  +++Y++LNVTL+    + ES Y   ++ +V  L+ K L   D G  +
Sbjct: 230  LWQLFIDTSVKHSEEVYEKLNVTLSHADIKPESAYNSMLQGIVDDLKAKELAVEDQGALV 289

Query: 1403 MWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            ++ +   D+   P   +  K+ GGF Y T+DLAA + R  E  AD IV  TD R
Sbjct: 290  VFLQELADKEGNPSAFIVQKTGGGFLYSTTDLAACQYRSHELNADRIVIFTDAR 343


>gi|398801444|ref|ZP_10560686.1| arginyl-tRNA synthetase, partial [Pantoea sp. GM01]
 gi|398091765|gb|EJL82193.1| arginyl-tRNA synthetase, partial [Pantoea sp. GM01]
          Length = 559

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/573 (39%), Positives = 330/573 (57%), Gaps = 52/573 (9%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+ +          +  L  +  K+E+A PG
Sbjct: 18   QFGDYQANGIMAVAKKLG-----QAPRQLAEQVIQ--------HLDLNGIASKVEIAGPG 64

Query: 573  FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL R +   Q    +      V+ V P T      ++VD+S+PN+AK+MHVGH+RS
Sbjct: 65   FINIFLDRAWLAAQTAQALQLPRLGVSTVSPQT------IVVDYSAPNVAKQMHVGHVRS 118

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L +K  +   ++  +ADL+AFY+
Sbjct: 119  TIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYL-EKQQNENHEAIALADLEAFYR 177

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
            E+K  +D DE F +RA   VV LQ  D   +  W+ + D++    Q +YDRLNVTLT + 
Sbjct: 178  EAKITYDADEAFAERARSYVVKLQGGDEYCRSMWKKLVDITMSQNQLVYDRLNVTLTRKD 237

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGF 795
              GES Y   +  +V  L +KGL    +G  +++        GE  G I   I K DGG+
Sbjct: 238  VMGESLYNDMLPGIVADLREKGLAVTSEGATVVFLDEFKNKEGEPMGVI---IQKKDGGY 294

Query: 796  TYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFG 855
             Y T+D+A  + R E   AD ++Y  D  Q  H +      +KAG + P    ++   FG
Sbjct: 295  LYTTTDIACAKYRFETLHADRVLYYIDSRQHQHLQQAWTIVRKAGYV-PESVPLEHHAFG 353

Query: 856  VVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGC 915
            ++LG+D + FKTRSG T++L++LLDE + R+   + +KN   E++  EL +  + V  G 
Sbjct: 354  MMLGKDGRPFKTRSGGTIRLADLLDEAVERAHALVSEKN--PEMSAQELKDLSEVVGIGA 411

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
            +KYADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI+++ L     S 
Sbjct: 412  VKYADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDADSL-----SG 466

Query: 976  PVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDA 1035
             + L  E+E  LA  LL+  +V+  V RD   H +C YLY+++  FS FY++C  +  + 
Sbjct: 467  DMVLTEEREAQLATRLLQFEEVITQVARDGTPHVMCAYLYELAGQFSGFYEHCPILSAED 526

Query: 1036 EGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            E    T+   RL LA  TAK +K+  D L I+T
Sbjct: 527  E----TIRNSRLQLAALTAKTLKQGLDTLGIKT 555



 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/337 (39%), Positives = 191/337 (56%), Gaps = 40/337 (11%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+ +          +  L  +  K+E+A PG
Sbjct: 18  QFGDYQANGIMAVAKKLG-----QAPRQLAEQVIQ--------HLDLNGIASKVEIAGPG 64

Query: 183 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL R +   Q    +      V+ V P T      ++VD+S+PN+AK+MHVGH+RS
Sbjct: 65  FINIFLDRAWLAAQTAQALQLPRLGVSTVSPQT------IVVDYSAPNVAKQMHVGHVRS 118

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L +K  +   ++  +ADL+AFY+
Sbjct: 119 TIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYL-EKQQNENHEAIALADLEAFYR 177

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
           E+K  +D DE F +RA   VV LQ  D   +  W+ + D++    Q +YDRLNVTLT + 
Sbjct: 178 EAKITYDADEAFAERARSYVVKLQGGDEYCRSMWKKLVDITMSQNQLVYDRLNVTLTRKD 237

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGF 405
             GES Y   +  +V  L +KGL    +G  +++        GE  G I   I K DGG+
Sbjct: 238 VMGESLYNDMLPGIVADLREKGLAVTSEGATVVFLDEFKNKEGEPMGVI---IQKKDGGY 294

Query: 406 TYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            Y T+D+A  + R E   AD ++Y  D R +  + QA
Sbjct: 295 LYTTTDIACAKYRFETLHADRVLYYIDSRQHQHLQQA 331



 Score =  231 bits (589), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 191/336 (56%), Gaps = 41/336 (12%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+ +          +  L  +  K+E+A PG
Sbjct: 18   QFGDYQANGIMAVAKKLG-----QAPRQLAEQVIQ--------HLDLNGIASKVEIAGPG 64

Query: 1200 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL R +   Q    +      V+ V P T      ++VD+S+PN+AK+MHVGH+RS
Sbjct: 65   FINIFLDRAWLAAQTAQALQLPRLGVSTVSPQT------IVVDYSAPNVAKQMHVGHVRS 118

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ K  +   ++  +ADL+AFY+
Sbjct: 119  TIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLE-KQQNENHEAIALADLEAFYR 177

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
            E+K  +D DE F +RA   VV LQ  D   +  W+ + D++    Q +YDRLNVTLT + 
Sbjct: 178  EAKITYDADEAFAERARSYVVKLQGGDEYCRSMWKKLVDITMSQNQLVYDRLNVTLTRKD 237

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGF 1422
              GES Y   +  +V  L +KGL    +G  +++        GE  G I   I K DGG+
Sbjct: 238  VMGESLYNDMLPGIVADLREKGLAVTSEGATVVFLDEFKNKEGEPMGVI---IQKKDGGY 294

Query: 1423 TYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             Y T+D+A  + R E   AD ++Y  D R  HQ LQ
Sbjct: 295  LYTTTDIACAKYRFETLHADRVLYYIDSRQ-HQHLQ 329


>gi|191168079|ref|ZP_03029878.1| arginyl-tRNA synthetase [Escherichia coli B7A]
 gi|300924967|ref|ZP_07140893.1| arginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301327666|ref|ZP_07220873.1| arginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|307314212|ref|ZP_07593822.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|309796014|ref|ZP_07690427.1| arginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|378712680|ref|YP_005277573.1| arginyl-tRNA synthetase [Escherichia coli KO11FL]
 gi|386609265|ref|YP_006124751.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|386701152|ref|YP_006164989.1| arginyl-tRNA synthetase [Escherichia coli KO11FL]
 gi|386709738|ref|YP_006173459.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|417597010|ref|ZP_12247658.1| arginyl-tRNA synthetase [Escherichia coli 3030-1]
 gi|417608467|ref|ZP_12258973.1| arginyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
 gi|422956746|ref|ZP_16969220.1| arginyl-tRNA synthetase [Escherichia coli H494]
 gi|427805010|ref|ZP_18972077.1| arginine tRNA synthetase [Escherichia coli chi7122]
 gi|427809566|ref|ZP_18976631.1| arginine tRNA synthetase [Escherichia coli]
 gi|443617956|ref|YP_007381812.1| arginyl-tRNA ligase [Escherichia coli APEC O78]
 gi|450215924|ref|ZP_21895604.1| arginyl-tRNA ligase [Escherichia coli O08]
 gi|190901877|gb|EDV61627.1| arginyl-tRNA synthetase [Escherichia coli B7A]
 gi|300418879|gb|EFK02190.1| arginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300845761|gb|EFK73521.1| arginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|306906181|gb|EFN36699.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|308120464|gb|EFO57726.1| arginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|315061182|gb|ADT75509.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|323378241|gb|ADX50509.1| arginyl-tRNA synthetase [Escherichia coli KO11FL]
 gi|345355322|gb|EGW87533.1| arginyl-tRNA synthetase [Escherichia coli 3030-1]
 gi|345359057|gb|EGW91236.1| arginyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
 gi|371599047|gb|EHN87837.1| arginyl-tRNA synthetase [Escherichia coli H494]
 gi|383392679|gb|AFH17637.1| arginyl-tRNA synthetase [Escherichia coli KO11FL]
 gi|383405430|gb|AFH11673.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|412963192|emb|CCK47111.1| arginine tRNA synthetase [Escherichia coli chi7122]
 gi|412969745|emb|CCJ44384.1| arginine tRNA synthetase [Escherichia coli]
 gi|443422464|gb|AGC87368.1| arginyl-tRNA ligase [Escherichia coli APEC O78]
 gi|449318764|gb|EMD08826.1| arginyl-tRNA ligase [Escherichia coli O08]
          Length = 577

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/567 (40%), Positives = 322/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 190/333 (57%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 188/330 (56%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|432674955|ref|ZP_19910423.1| arginyl-tRNA synthetase [Escherichia coli KTE142]
 gi|431214901|gb|ELF12643.1| arginyl-tRNA synthetase [Escherichia coli KTE142]
          Length = 577

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/567 (40%), Positives = 322/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 190/333 (57%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 188/330 (56%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYESLHADRVLYYIDSRQHQHLMQ 347


>gi|432680459|ref|ZP_19915836.1| arginyl-tRNA synthetase [Escherichia coli KTE143]
 gi|431221389|gb|ELF18710.1| arginyl-tRNA synthetase [Escherichia coli KTE143]
          Length = 577

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGVGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +   +E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREVREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|22126152|ref|NP_669575.1| arginyl-tRNA synthetase [Yersinia pestis KIM10+]
 gi|45441691|ref|NP_993230.1| arginyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108807424|ref|YP_651340.1| arginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|145598372|ref|YP_001162448.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366025|ref|ZP_01888060.1| arginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162421704|ref|YP_001606856.1| arginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926439|ref|ZP_02222271.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
            F1991016]
 gi|165938879|ref|ZP_02227433.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
            IP275]
 gi|166009270|ref|ZP_02230168.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
            E1979001]
 gi|166210482|ref|ZP_02236517.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
            B42003004]
 gi|167401417|ref|ZP_02306914.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
            UG05-0454]
 gi|167420373|ref|ZP_02312126.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
            MG05-1020]
 gi|167424725|ref|ZP_02316478.1| arginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
            K1973002]
 gi|218929153|ref|YP_002347028.1| arginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229894757|ref|ZP_04509937.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229897461|ref|ZP_04512617.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
            PEXU2]
 gi|229898107|ref|ZP_04513256.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
            195]
 gi|270490849|ref|ZP_06207923.1| arginine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503888|ref|YP_003567950.1| arginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|384122397|ref|YP_005505017.1| arginyl-tRNA synthetase [Yersinia pestis D106004]
 gi|384126206|ref|YP_005508820.1| arginyl-tRNA synthetase [Yersinia pestis D182038]
 gi|384140125|ref|YP_005522827.1| arginyl-tRNA synthetase [Yersinia pestis A1122]
 gi|420546923|ref|ZP_15044860.1| arginine--tRNA ligase [Yersinia pestis PY-01]
 gi|420552245|ref|ZP_15049616.1| arginine--tRNA ligase [Yersinia pestis PY-02]
 gi|420557762|ref|ZP_15054468.1| arginine--tRNA ligase [Yersinia pestis PY-03]
 gi|420563267|ref|ZP_15059337.1| arginine--tRNA ligase [Yersinia pestis PY-04]
 gi|420568309|ref|ZP_15063914.1| arginine--tRNA ligase [Yersinia pestis PY-05]
 gi|420573981|ref|ZP_15069050.1| arginine--tRNA ligase [Yersinia pestis PY-06]
 gi|420579290|ref|ZP_15073870.1| arginine--tRNA ligase [Yersinia pestis PY-07]
 gi|420584622|ref|ZP_15078708.1| arginine--tRNA ligase [Yersinia pestis PY-08]
 gi|420589751|ref|ZP_15083321.1| arginine--tRNA ligase [Yersinia pestis PY-09]
 gi|420595144|ref|ZP_15088180.1| arginine--tRNA ligase [Yersinia pestis PY-10]
 gi|420600784|ref|ZP_15093208.1| arginine--tRNA ligase [Yersinia pestis PY-11]
 gi|420606233|ref|ZP_15098105.1| arginine--tRNA ligase [Yersinia pestis PY-12]
 gi|420611612|ref|ZP_15102953.1| arginine--tRNA ligase [Yersinia pestis PY-13]
 gi|420616980|ref|ZP_15107672.1| arginine--tRNA ligase [Yersinia pestis PY-14]
 gi|420622309|ref|ZP_15112417.1| arginine--tRNA ligase [Yersinia pestis PY-15]
 gi|420627396|ref|ZP_15117030.1| arginine--tRNA ligase [Yersinia pestis PY-16]
 gi|420632494|ref|ZP_15121625.1| arginine--tRNA ligase [Yersinia pestis PY-19]
 gi|420637703|ref|ZP_15126295.1| arginine--tRNA ligase [Yersinia pestis PY-25]
 gi|420643237|ref|ZP_15131318.1| arginine--tRNA ligase [Yersinia pestis PY-29]
 gi|420648453|ref|ZP_15136061.1| arginine--tRNA ligase [Yersinia pestis PY-32]
 gi|420654095|ref|ZP_15141130.1| arginine--tRNA ligase [Yersinia pestis PY-34]
 gi|420659574|ref|ZP_15146054.1| arginine--tRNA ligase [Yersinia pestis PY-36]
 gi|420664902|ref|ZP_15150825.1| arginine--tRNA ligase [Yersinia pestis PY-42]
 gi|420669799|ref|ZP_15155274.1| arginine--tRNA ligase [Yersinia pestis PY-45]
 gi|420675143|ref|ZP_15160132.1| arginine--tRNA ligase [Yersinia pestis PY-46]
 gi|420680734|ref|ZP_15165198.1| arginine--tRNA ligase [Yersinia pestis PY-47]
 gi|420686017|ref|ZP_15169916.1| arginine--tRNA ligase [Yersinia pestis PY-48]
 gi|420691209|ref|ZP_15174501.1| arginine--tRNA ligase [Yersinia pestis PY-52]
 gi|420697008|ref|ZP_15179579.1| arginine--tRNA ligase [Yersinia pestis PY-53]
 gi|420702576|ref|ZP_15184187.1| arginine--tRNA ligase [Yersinia pestis PY-54]
 gi|420708276|ref|ZP_15188999.1| arginine--tRNA ligase [Yersinia pestis PY-55]
 gi|420713677|ref|ZP_15193832.1| arginine--tRNA ligase [Yersinia pestis PY-56]
 gi|420719139|ref|ZP_15198580.1| arginine--tRNA ligase [Yersinia pestis PY-58]
 gi|420724665|ref|ZP_15203379.1| arginine--tRNA ligase [Yersinia pestis PY-59]
 gi|420730288|ref|ZP_15208410.1| arginine--tRNA ligase [Yersinia pestis PY-60]
 gi|420735303|ref|ZP_15212949.1| arginine--tRNA ligase [Yersinia pestis PY-61]
 gi|420740778|ref|ZP_15217875.1| arginine--tRNA ligase [Yersinia pestis PY-63]
 gi|420746307|ref|ZP_15222640.1| arginine--tRNA ligase [Yersinia pestis PY-64]
 gi|420751918|ref|ZP_15227540.1| arginine--tRNA ligase [Yersinia pestis PY-65]
 gi|420757427|ref|ZP_15232139.1| arginine--tRNA ligase [Yersinia pestis PY-66]
 gi|420762973|ref|ZP_15236825.1| arginine--tRNA ligase [Yersinia pestis PY-71]
 gi|420768154|ref|ZP_15241492.1| arginine--tRNA ligase [Yersinia pestis PY-72]
 gi|420773200|ref|ZP_15246036.1| arginine--tRNA ligase [Yersinia pestis PY-76]
 gi|420778731|ref|ZP_15250937.1| arginine--tRNA ligase [Yersinia pestis PY-88]
 gi|420784311|ref|ZP_15255825.1| arginine--tRNA ligase [Yersinia pestis PY-89]
 gi|420789556|ref|ZP_15260490.1| arginine--tRNA ligase [Yersinia pestis PY-90]
 gi|420795053|ref|ZP_15265442.1| arginine--tRNA ligase [Yersinia pestis PY-91]
 gi|420800110|ref|ZP_15269982.1| arginine--tRNA ligase [Yersinia pestis PY-92]
 gi|420805499|ref|ZP_15274851.1| arginine--tRNA ligase [Yersinia pestis PY-93]
 gi|420810808|ref|ZP_15279640.1| arginine--tRNA ligase [Yersinia pestis PY-94]
 gi|420816384|ref|ZP_15284653.1| arginine--tRNA ligase [Yersinia pestis PY-95]
 gi|420821655|ref|ZP_15289408.1| arginine--tRNA ligase [Yersinia pestis PY-96]
 gi|420826751|ref|ZP_15293973.1| arginine--tRNA ligase [Yersinia pestis PY-98]
 gi|420832449|ref|ZP_15299120.1| arginine--tRNA ligase [Yersinia pestis PY-99]
 gi|420837321|ref|ZP_15303524.1| arginine--tRNA ligase [Yersinia pestis PY-100]
 gi|420842490|ref|ZP_15308209.1| arginine--tRNA ligase [Yersinia pestis PY-101]
 gi|420848137|ref|ZP_15313291.1| arginine--tRNA ligase [Yersinia pestis PY-102]
 gi|420853654|ref|ZP_15318054.1| arginine--tRNA ligase [Yersinia pestis PY-103]
 gi|420859008|ref|ZP_15322685.1| arginine--tRNA ligase [Yersinia pestis PY-113]
 gi|421763536|ref|ZP_16200331.1| arginyl-tRNA ligase [Yersinia pestis INS]
 gi|21542252|sp|Q8ZEV7.1|SYR_YERPE RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|123245827|sp|Q1C827.1|SYR_YERPA RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|166200588|sp|A4TJL3.1|SYR_YERPP RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|238687249|sp|A9QYY6.1|SYR_YERPG RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|21959114|gb|AAM85826.1|AE013829_6 arginine tRNA synthetase [Yersinia pestis KIM10+]
 gi|45436553|gb|AAS62107.1| arginyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108779337|gb|ABG13395.1| arginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347764|emb|CAL20681.1| arginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145210068|gb|ABP39475.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292438|gb|EDM42512.1| arginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162354519|gb|ABX88467.1| arginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913242|gb|EDR31865.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
            IP275]
 gi|165921660|gb|EDR38857.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
            F1991016]
 gi|165991825|gb|EDR44126.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
            E1979001]
 gi|166207662|gb|EDR52142.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
            B42003004]
 gi|166962068|gb|EDR58089.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
            MG05-1020]
 gi|167049113|gb|EDR60521.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
            UG05-0454]
 gi|167056607|gb|EDR66376.1| arginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
            K1973002]
 gi|229688823|gb|EEO80890.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
            195]
 gi|229693798|gb|EEO83847.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
            PEXU2]
 gi|229702230|gb|EEO90249.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361993|gb|ACY58714.1| arginyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365870|gb|ACY62427.1| arginyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270339353|gb|EFA50130.1| arginine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354347|gb|ADE64688.1| arginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|342855254|gb|AEL73807.1| arginyl-tRNA synthetase [Yersinia pestis A1122]
 gi|391426244|gb|EIQ88445.1| arginine--tRNA ligase [Yersinia pestis PY-01]
 gi|391427992|gb|EIQ90019.1| arginine--tRNA ligase [Yersinia pestis PY-02]
 gi|391429020|gb|EIQ90916.1| arginine--tRNA ligase [Yersinia pestis PY-03]
 gi|391441830|gb|EIR02285.1| arginine--tRNA ligase [Yersinia pestis PY-04]
 gi|391443470|gb|EIR03784.1| arginine--tRNA ligase [Yersinia pestis PY-05]
 gi|391446729|gb|EIR06738.1| arginine--tRNA ligase [Yersinia pestis PY-06]
 gi|391458959|gb|EIR17778.1| arginine--tRNA ligase [Yersinia pestis PY-07]
 gi|391459849|gb|EIR18595.1| arginine--tRNA ligase [Yersinia pestis PY-08]
 gi|391462032|gb|EIR20595.1| arginine--tRNA ligase [Yersinia pestis PY-09]
 gi|391474884|gb|EIR32136.1| arginine--tRNA ligase [Yersinia pestis PY-10]
 gi|391476810|gb|EIR33902.1| arginine--tRNA ligase [Yersinia pestis PY-11]
 gi|391477138|gb|EIR34198.1| arginine--tRNA ligase [Yersinia pestis PY-12]
 gi|391490740|gb|EIR46364.1| arginine--tRNA ligase [Yersinia pestis PY-13]
 gi|391491917|gb|EIR47430.1| arginine--tRNA ligase [Yersinia pestis PY-15]
 gi|391494089|gb|EIR49366.1| arginine--tRNA ligase [Yersinia pestis PY-14]
 gi|391506546|gb|EIR60458.1| arginine--tRNA ligase [Yersinia pestis PY-16]
 gi|391507300|gb|EIR61139.1| arginine--tRNA ligase [Yersinia pestis PY-19]
 gi|391511669|gb|EIR65053.1| arginine--tRNA ligase [Yersinia pestis PY-25]
 gi|391522170|gb|EIR74578.1| arginine--tRNA ligase [Yersinia pestis PY-29]
 gi|391524665|gb|EIR76862.1| arginine--tRNA ligase [Yersinia pestis PY-34]
 gi|391525836|gb|EIR77940.1| arginine--tRNA ligase [Yersinia pestis PY-32]
 gi|391537759|gb|EIR88621.1| arginine--tRNA ligase [Yersinia pestis PY-36]
 gi|391540367|gb|EIR91002.1| arginine--tRNA ligase [Yersinia pestis PY-42]
 gi|391542308|gb|EIR92780.1| arginine--tRNA ligase [Yersinia pestis PY-45]
 gi|391555595|gb|EIS04757.1| arginine--tRNA ligase [Yersinia pestis PY-46]
 gi|391556077|gb|EIS05192.1| arginine--tRNA ligase [Yersinia pestis PY-47]
 gi|391557344|gb|EIS06348.1| arginine--tRNA ligase [Yersinia pestis PY-48]
 gi|391570850|gb|EIS18272.1| arginine--tRNA ligase [Yersinia pestis PY-52]
 gi|391571468|gb|EIS18817.1| arginine--tRNA ligase [Yersinia pestis PY-53]
 gi|391579416|gb|EIS25549.1| arginine--tRNA ligase [Yersinia pestis PY-54]
 gi|391583890|gb|EIS29496.1| arginine--tRNA ligase [Yersinia pestis PY-55]
 gi|391586993|gb|EIS32228.1| arginine--tRNA ligase [Yersinia pestis PY-56]
 gi|391598921|gb|EIS42594.1| arginine--tRNA ligase [Yersinia pestis PY-58]
 gi|391600265|gb|EIS43812.1| arginine--tRNA ligase [Yersinia pestis PY-60]
 gi|391602037|gb|EIS45386.1| arginine--tRNA ligase [Yersinia pestis PY-59]
 gi|391614868|gb|EIS56697.1| arginine--tRNA ligase [Yersinia pestis PY-61]
 gi|391615473|gb|EIS57234.1| arginine--tRNA ligase [Yersinia pestis PY-63]
 gi|391620454|gb|EIS61605.1| arginine--tRNA ligase [Yersinia pestis PY-64]
 gi|391627043|gb|EIS67301.1| arginine--tRNA ligase [Yersinia pestis PY-65]
 gi|391636194|gb|EIS75256.1| arginine--tRNA ligase [Yersinia pestis PY-66]
 gi|391638271|gb|EIS77094.1| arginine--tRNA ligase [Yersinia pestis PY-71]
 gi|391640782|gb|EIS79290.1| arginine--tRNA ligase [Yersinia pestis PY-72]
 gi|391650317|gb|EIS87615.1| arginine--tRNA ligase [Yersinia pestis PY-76]
 gi|391654886|gb|EIS91684.1| arginine--tRNA ligase [Yersinia pestis PY-88]
 gi|391659506|gb|EIS95782.1| arginine--tRNA ligase [Yersinia pestis PY-89]
 gi|391663291|gb|EIS99147.1| arginine--tRNA ligase [Yersinia pestis PY-90]
 gi|391670792|gb|EIT05797.1| arginine--tRNA ligase [Yersinia pestis PY-91]
 gi|391680724|gb|EIT14747.1| arginine--tRNA ligase [Yersinia pestis PY-93]
 gi|391682127|gb|EIT16030.1| arginine--tRNA ligase [Yersinia pestis PY-92]
 gi|391682832|gb|EIT16661.1| arginine--tRNA ligase [Yersinia pestis PY-94]
 gi|391694508|gb|EIT27161.1| arginine--tRNA ligase [Yersinia pestis PY-95]
 gi|391698059|gb|EIT30403.1| arginine--tRNA ligase [Yersinia pestis PY-96]
 gi|391699326|gb|EIT31528.1| arginine--tRNA ligase [Yersinia pestis PY-98]
 gi|391709374|gb|EIT40558.1| arginine--tRNA ligase [Yersinia pestis PY-99]
 gi|391715364|gb|EIT45920.1| arginine--tRNA ligase [Yersinia pestis PY-100]
 gi|391716137|gb|EIT46614.1| arginine--tRNA ligase [Yersinia pestis PY-101]
 gi|391726555|gb|EIT55887.1| arginine--tRNA ligase [Yersinia pestis PY-102]
 gi|391729844|gb|EIT58792.1| arginine--tRNA ligase [Yersinia pestis PY-103]
 gi|391734939|gb|EIT63154.1| arginine--tRNA ligase [Yersinia pestis PY-113]
 gi|411176437|gb|EKS46457.1| arginyl-tRNA ligase [Yersinia pestis INS]
          Length = 576

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 234/611 (38%), Positives = 342/611 (55%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +   AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAVERAGKLIAEKN--PDMPADELKQVINAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ R AG++   L     + P+ +  ++E  LA  LL+  ++
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFRRAGVDETSL-----TLPLVVTEDREATLATRLLQFEEI 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESE----EIRQSRLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIQT 572



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 207/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53  -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217 LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277 LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 206/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|108811686|ref|YP_647453.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229901967|ref|ZP_04517088.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|384414773|ref|YP_005624135.1| arginyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
            Harbin 35]
 gi|122980195|sp|Q1CJH7.1|SYR_YERPN RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|108775334|gb|ABG17853.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229680863|gb|EEO76958.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|320015277|gb|ADV98848.1| arginyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
            Harbin 35]
          Length = 576

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 234/611 (38%), Positives = 342/611 (55%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFSLRARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL +   AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAVERAGKLIAEKN--PDMPADELKQVINAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ S+ R AG++   L     + P+ +  ++E  LA  LL+  ++
Sbjct: 451  ALDGNTAPYMQYAYTRVVSVFRRAGVDETSL-----TLPLVVTEDREATLATRLLQFEEI 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESE----EIRQSRLKLAMLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  D L I+T
Sbjct: 562  KQGLDTLGIQT 572



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 207/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53  -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104 KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFSLRARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217 LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277 LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 206/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL R +  E+++  +   
Sbjct: 53   -MQPRQLAERVVELL--------DLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R N
Sbjct: 104  KLGVAPVEPQT------IVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+++KK +DEDE F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLELFYQQAKKTYDEDEEFSLRARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    Q  YDRLNVTLT+    GES Y   + ++V  L+ KG
Sbjct: 217  LQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I
Sbjct: 277  LAVESEGATVVYLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRI 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|157145345|ref|YP_001452664.1| arginyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166232776|sp|A8AFG5.1|SYR_CITK8 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|157082550|gb|ABV12228.1| hypothetical protein CKO_01085 [Citrobacter koseri ATCC BAA-895]
          Length = 577

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 237/608 (38%), Positives = 337/608 (55%), Gaps = 49/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+ VA    G          +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQAMIVA----GAPANCEPQVRQSAKVQFGDYQANGMMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +         T+  L  +  K+E+A PGF+N+FL   +  E ++  + + 
Sbjct: 53   -MAPRQLAEQVL--------THLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASE 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV  P    K  V++D+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVG
Sbjct: 104  RLGVAKPA---KQTVVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +DEDE F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             DP +   W  + D++    Q  Y+RLNVTLT     GES Y   +  +V  L+ +GL  
Sbjct: 220  GDPYFLDMWRKLVDITMTQNQITYNRLNVTLTRDDVMGESLYNPMLPGIVADLKAQGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLHADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E L R+   + +KN   ++   EL +   AV  G +KYADLS NR  DY+F +D ML   
Sbjct: 396  EALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ S+ R A I+   L     S PV +  ++E  LA  LL+  + L +
Sbjct: 454  GNTAPYMQYAYTRVLSVFRKAEIDESAL----SSAPVVIREDREAQLAARLLQFEETLTV 509

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYDI+  FS FY++C  +  + E     V   RL LA+ TAK +K  
Sbjct: 510  VAREGTPHVMCAYLYDIAGLFSGFYEHCPILSAENE----EVRNSRLKLAQLTAKTLKLG 565

Query: 1061 FDILNIRT 1068
             D L I T
Sbjct: 566  LDTLGIET 573



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/372 (37%), Positives = 204/372 (54%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+ VA    G          +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQAMIVA----GAPANCEPQVRQSAKVQFGDYQANGMMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +         T+  L  +  K+E+A PGF+N+FL   +  E ++  + + 
Sbjct: 53  -MAPRQLAEQVL--------THLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASE 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GV  P    K  V++D+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVG
Sbjct: 104 RLGVAKPA---KQTVVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +DEDE F +RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            DP +   W  + D++    Q  Y+RLNVTLT     GES Y   +  +V  L+ +GL  
Sbjct: 220 GDPYFLDMWRKLVDITMTQNQITYNRLNVTLTRDDVMGESLYNPMLPGIVADLKAQGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280 ESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLHADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/371 (37%), Positives = 203/371 (54%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+ VA    G          +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQAMIVA----GAPANCEPQVRQSAKVQFGDYQANGMMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +         T+  L  +  K+E+A PGF+N+FL   +  E ++  + + 
Sbjct: 53   -MAPRQLAEQVL--------THLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASE 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV  P    K  V++D+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVG
Sbjct: 104  RLGVAKPA---KQTVVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +DEDE F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             DP +   W  + D++    Q  Y+RLNVTLT     GES Y   +  +V  L+ +GL  
Sbjct: 220  GDPYFLDMWRKLVDITMTQNQITYNRLNVTLTRDDVMGESLYNPMLPGIVADLKAQGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 280  ESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLHADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|146291657|ref|YP_001182081.1| arginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166232842|sp|A4Y2U9.1|SYR_SHEPC RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|145563347|gb|ABP74282.1| arginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 581

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/567 (40%), Positives = 337/567 (59%), Gaps = 43/567 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K+       KNP ++AQ I       + T P+ A  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASA-FVAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAHLELSDLETFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEALPVIIQKADGGYLYATSDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  + + ++ +GFG + GED 
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVREDMS-LEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTRSG  VKL +LL+E   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRSGGVVKLVDLLEEANVRALELVRSKN--PDMDEETLAEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI-ARTAGINSEDLRVAAQSTPVSLEH 981
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I  R  G++    ++        LEH
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRVTGLDLSQAKIV-------LEH 494

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            EKE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D + +   
Sbjct: 495  EKEKDLGNKLAQFGEILNRVVDKGQPHVLCAYLYELAGAFSSFYEACPVLAADNDEQ--- 551

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RLLL++ TA+ ++K  ++L I T
Sbjct: 552  -KNSRLLLSQLTARTLQKGLNLLGIET 577



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 195/322 (60%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K+       KNP ++AQ I       + T P+ A  + K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASA-FVAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145 SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAHLELSDLETFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y TSDL
Sbjct: 265 SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEALPVIIQKADGGYLYATSDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSNVLKADRVLYFVDLR 346



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 195/322 (60%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K+       KNP ++AQ I       + T P+ A  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASA-FVAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAHLELSDLETFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEALPVIIQKADGGYLYATSDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLR 346


>gi|91211101|ref|YP_541087.1| arginyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117624028|ref|YP_852941.1| arginyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218558741|ref|YP_002391654.1| arginyl-tRNA synthetase [Escherichia coli S88]
 gi|237705832|ref|ZP_04536313.1| arginyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|386599674|ref|YP_006101180.1| arginyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|386604157|ref|YP_006110457.1| arginyl-tRNA synthetase [Escherichia coli UM146]
 gi|417084821|ref|ZP_11952460.1| arginyl-tRNA synthetase [Escherichia coli cloneA_i1]
 gi|419946712|ref|ZP_14463100.1| arginyl-tRNA synthetase [Escherichia coli HM605]
 gi|422749103|ref|ZP_16803015.1| arginyl-tRNA synthetase [Escherichia coli H252]
 gi|422755214|ref|ZP_16809039.1| arginyl-tRNA synthetase [Escherichia coli H263]
 gi|422838206|ref|ZP_16886179.1| arginyl-tRNA synthetase [Escherichia coli H397]
 gi|432358207|ref|ZP_19601436.1| arginyl-tRNA synthetase [Escherichia coli KTE4]
 gi|432362833|ref|ZP_19606004.1| arginyl-tRNA synthetase [Escherichia coli KTE5]
 gi|432441287|ref|ZP_19683628.1| arginyl-tRNA synthetase [Escherichia coli KTE189]
 gi|432446407|ref|ZP_19688706.1| arginyl-tRNA synthetase [Escherichia coli KTE191]
 gi|432573905|ref|ZP_19810387.1| arginyl-tRNA synthetase [Escherichia coli KTE55]
 gi|432588134|ref|ZP_19824490.1| arginyl-tRNA synthetase [Escherichia coli KTE58]
 gi|432597854|ref|ZP_19834130.1| arginyl-tRNA synthetase [Escherichia coli KTE62]
 gi|432754615|ref|ZP_19989166.1| arginyl-tRNA synthetase [Escherichia coli KTE22]
 gi|432778745|ref|ZP_20012988.1| arginyl-tRNA synthetase [Escherichia coli KTE59]
 gi|432787691|ref|ZP_20021823.1| arginyl-tRNA synthetase [Escherichia coli KTE65]
 gi|432821128|ref|ZP_20054820.1| arginyl-tRNA synthetase [Escherichia coli KTE118]
 gi|432827272|ref|ZP_20060924.1| arginyl-tRNA synthetase [Escherichia coli KTE123]
 gi|433005324|ref|ZP_20193754.1| arginyl-tRNA synthetase [Escherichia coli KTE227]
 gi|433007822|ref|ZP_20196240.1| arginyl-tRNA synthetase [Escherichia coli KTE229]
 gi|433014012|ref|ZP_20202374.1| arginyl-tRNA synthetase [Escherichia coli KTE104]
 gi|433023641|ref|ZP_20211642.1| arginyl-tRNA synthetase [Escherichia coli KTE106]
 gi|433153942|ref|ZP_20338897.1| arginyl-tRNA synthetase [Escherichia coli KTE176]
 gi|433163652|ref|ZP_20348397.1| arginyl-tRNA synthetase [Escherichia coli KTE179]
 gi|433168773|ref|ZP_20353406.1| arginyl-tRNA synthetase [Escherichia coli KTE180]
 gi|433323128|ref|ZP_20400498.1| arginyl-tRNA ligase [Escherichia coli J96]
 gi|123084447|sp|Q1RAQ8.1|SYR_ECOUT RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|166232784|sp|A1AC37.1|SYR_ECOK1 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|226701376|sp|B7MBT5.1|SYR_ECO45 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|91072675|gb|ABE07556.1| arginine tRNA synthetase [Escherichia coli UTI89]
 gi|115513152|gb|ABJ01227.1| arginyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218365510|emb|CAR03237.1| arginyl-tRNA synthetase [Escherichia coli S88]
 gi|226900589|gb|EEH86848.1| arginyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|294493402|gb|ADE92158.1| arginyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|307626641|gb|ADN70945.1| arginyl-tRNA synthetase [Escherichia coli UM146]
 gi|323952379|gb|EGB48252.1| arginyl-tRNA synthetase [Escherichia coli H252]
 gi|323956508|gb|EGB52250.1| arginyl-tRNA synthetase [Escherichia coli H263]
 gi|355351996|gb|EHG01183.1| arginyl-tRNA synthetase [Escherichia coli cloneA_i1]
 gi|371614130|gb|EHO02615.1| arginyl-tRNA synthetase [Escherichia coli H397]
 gi|388412248|gb|EIL72342.1| arginyl-tRNA synthetase [Escherichia coli HM605]
 gi|430878191|gb|ELC01623.1| arginyl-tRNA synthetase [Escherichia coli KTE4]
 gi|430887372|gb|ELC10199.1| arginyl-tRNA synthetase [Escherichia coli KTE5]
 gi|430967128|gb|ELC84490.1| arginyl-tRNA synthetase [Escherichia coli KTE189]
 gi|430972680|gb|ELC89648.1| arginyl-tRNA synthetase [Escherichia coli KTE191]
 gi|431108616|gb|ELE12588.1| arginyl-tRNA synthetase [Escherichia coli KTE55]
 gi|431120467|gb|ELE23465.1| arginyl-tRNA synthetase [Escherichia coli KTE58]
 gi|431130721|gb|ELE32804.1| arginyl-tRNA synthetase [Escherichia coli KTE62]
 gi|431302816|gb|ELF91995.1| arginyl-tRNA synthetase [Escherichia coli KTE22]
 gi|431326898|gb|ELG14243.1| arginyl-tRNA synthetase [Escherichia coli KTE59]
 gi|431337408|gb|ELG24496.1| arginyl-tRNA synthetase [Escherichia coli KTE65]
 gi|431367975|gb|ELG54443.1| arginyl-tRNA synthetase [Escherichia coli KTE118]
 gi|431372521|gb|ELG58183.1| arginyl-tRNA synthetase [Escherichia coli KTE123]
 gi|431515229|gb|ELH93056.1| arginyl-tRNA synthetase [Escherichia coli KTE227]
 gi|431524355|gb|ELI01302.1| arginyl-tRNA synthetase [Escherichia coli KTE229]
 gi|431531998|gb|ELI08653.1| arginyl-tRNA synthetase [Escherichia coli KTE104]
 gi|431537292|gb|ELI13440.1| arginyl-tRNA synthetase [Escherichia coli KTE106]
 gi|431675399|gb|ELJ41544.1| arginyl-tRNA synthetase [Escherichia coli KTE176]
 gi|431688739|gb|ELJ54257.1| arginyl-tRNA synthetase [Escherichia coli KTE179]
 gi|431689097|gb|ELJ54614.1| arginyl-tRNA synthetase [Escherichia coli KTE180]
 gi|432348296|gb|ELL42747.1| arginyl-tRNA ligase [Escherichia coli J96]
          Length = 577

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/567 (40%), Positives = 323/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FG++Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGNYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (601), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 191/333 (57%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FG++Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGNYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (595), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 189/330 (57%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FG++Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGNYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|90411614|ref|ZP_01219624.1| arginyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327504|gb|EAS43857.1| arginyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 576

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 224/564 (39%), Positives = 331/564 (58%), Gaps = 34/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDVL--------DLDGIAEKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL + +   + ++ + +        K+  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDKSWLAARAEEALTDDRIGVAAEKQQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  RA   VV LQ  D      W+ + DV+    Q  YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVRARGFVVKLQSGDEYCAGMWKKLVDVTMVQNQINYDRLNVSLTRDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL    DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPNIVADLKEKGLAVESDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRFEQLNADRVLYFIDSRQHQHLMQAWSIVRKAGYV-PEEVTLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL  TE  +  + VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDESEVRAAKLIEAKN--PELEATEKDKIAKTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI + A +N  DL     + P+ +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFKRADVNLADL-----THPIVINDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL  TLL+  + ++ V+R+   H +C YL++++  FS FY+ C  +  +     + V  
Sbjct: 494  QALLSTLLQFEEAVLNVSREGQPHLMCTYLFELAGKFSSFYEACPILNAE-----EAVKQ 548

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  D+L I T
Sbjct: 549  SRLKLALLTAKTIKQGLDLLGIET 572



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 195/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDVL--------DLDGIAEKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL + +   + ++ + +        K+  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDKSWLAARAEEALTDDRIGVAAEKQQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  RA   VV LQ  D      W+ + DV+    Q  YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVRARGFVVKLQSGDEYCAGMWKKLVDVTMVQNQINYDRLNVSLTRDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL    DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPNIVADLKEKGLAVESDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E+  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRFEQLNADRVLYFIDSRQHQHLMQA 349



 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 194/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDVL--------DLDGIAEKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL + +   + ++ + +        K+  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDKSWLAARAEEALTDDRIGVAAEKQQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  RA   VV LQ  D      W+ + DV+    Q  YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVRARGFVVKLQSGDEYCAGMWKKLVDVTMVQNQINYDRLNVSLTRDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL    DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPNIVADLKEKGLAVESDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E+  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRFEQLNADRVLYFIDSRQHQHLMQ 348


>gi|416247668|ref|ZP_11635851.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326569480|gb|EGE19540.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 575

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 333/570 (58%), Gaps = 47/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K+  ++DL+AFY+
Sbjct: 136  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKNLDLSDLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+AA   R     AD ++  TD  Q +H +      +KAG + P++  M+   FG++L
Sbjct: 315  TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQAWLITRKAGFV-PDEFVMEHFTFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE + R+   ++ KN   +L+  E     +AVA G +KY
Sbjct: 374  GKDGKPFKTRTGGTVKLADLLDEAIERATTLIEQKN--PDLSAEEKRAVVEAVAIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            +DLS NRN DYVF +D ML   GNTA Y+ YAYTRI SI   AG++  D+        + 
Sbjct: 432  SDLSKNRNTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFARAGLDMADI-----GGEIV 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  +KE ALA  LL+  +VL+LV +D   H LC+YL++++  FS FY+ C  +  D + K
Sbjct: 487  IHEDKERALAVKLLQFEEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEACPILSSDDKTK 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 T RL LA  TAK +K+   +L I+T
Sbjct: 547  -----TSRLRLAALTAKTLKQGLQLLGIKT 571



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 188/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82  FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K+  ++DL+AFY+
Sbjct: 136 TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKNLDLSDLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
            +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195 AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255 TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+AA   R     AD ++  TD R      QA
Sbjct: 315 TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQA 348



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 186/326 (57%), Gaps = 34/326 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K+  ++DL+AFY+
Sbjct: 136  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKNLDLSDLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHR 1451
            T+D+AA   R     AD ++  TD R
Sbjct: 315  TTDIAAAAYRYHTLHADRVILFTDAR 340


>gi|432718997|ref|ZP_19953966.1| arginyl-tRNA synthetase [Escherichia coli KTE9]
 gi|432793083|ref|ZP_20027168.1| arginyl-tRNA synthetase [Escherichia coli KTE78]
 gi|432799040|ref|ZP_20033063.1| arginyl-tRNA synthetase [Escherichia coli KTE79]
 gi|431262809|gb|ELF54798.1| arginyl-tRNA synthetase [Escherichia coli KTE9]
 gi|431339827|gb|ELG26881.1| arginyl-tRNA synthetase [Escherichia coli KTE78]
 gi|431343907|gb|ELG30863.1| arginyl-tRNA synthetase [Escherichia coli KTE79]
          Length = 577

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + +  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAEND-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|432961897|ref|ZP_20151687.1| arginyl-tRNA synthetase [Escherichia coli KTE202]
 gi|433063271|ref|ZP_20250204.1| arginyl-tRNA synthetase [Escherichia coli KTE125]
 gi|431474853|gb|ELH54659.1| arginyl-tRNA synthetase [Escherichia coli KTE202]
 gi|431583105|gb|ELI55115.1| arginyl-tRNA synthetase [Escherichia coli KTE125]
          Length = 577

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSSFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (594), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|296112948|ref|YP_003626886.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920642|gb|ADG60993.1| arginyl-tRNA synthetase [Moraxella catarrhalis BBH18]
          Length = 575

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 332/570 (58%), Gaps = 47/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDNIAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 136  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+AA   R     AD ++  TD  Q +H +      +KAG + P++  M+   FG++L
Sbjct: 315  TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQAWLITRKAGFV-PDEFVMEHFTFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE + R+   ++ KN   +L+  E     +AVA G +KY
Sbjct: 374  GKDGKPFKTRTGGTVKLADLLDEAIERATTLIEQKN--PDLSAEEKRAVVEAVAIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            +DLS NRN DYVF +D ML   GNTA Y+ YAYTRI SI   AG++  D+        + 
Sbjct: 432  SDLSKNRNTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFARAGLDMADI-----GGEIV 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  +KE ALA  LL+  +VL+LV +D   H LC+YL++++  FS FY+ C  +  D + K
Sbjct: 487  IHEDKERALAVKLLQFEEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEACPILSSDDKTK 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 T RL LA  TAK +K+   +L I+T
Sbjct: 547  -----TSRLRLAALTAKTLKQGLQLLGIKT 571



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 187/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDNIAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82  FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 136 TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
            +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195 AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255 TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+AA   R     AD ++  TD R      QA
Sbjct: 315 TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQA 348



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 185/326 (56%), Gaps = 34/326 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDNIAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 136  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHR 1451
            T+D+AA   R     AD ++  TD R
Sbjct: 315  TTDIAAAAYRYHTLHADRVILFTDAR 340


>gi|39932107|sp|Q7VP38.1|SYR_HAEDU RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|33147727|gb|AAP95249.1| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 561

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 237/570 (41%), Positives = 335/570 (58%), Gaps = 47/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AMA  K         NP + AQ I          N  ++ ++DK+E+A PG
Sbjct: 21   EFGDYQANGAMAAAKK-----LAMNPREFAQKILD--------NLDVSDMVDKLEIAGPG 67

Query: 573  FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL   +  +Q        +  +   QP T      +L+D+SSPN+AKEMHVGHLRS
Sbjct: 68   FINIFLKPSWLAKQANFALQAVNFGIKTAQPQT------ILIDYSSPNVAKEMHVGHLRS 121

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+
Sbjct: 122  TIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEQASEMQLSDLEAFYR 180

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
             +K+ +D D+IF ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+ 
Sbjct: 181  AAKESYDSDQIFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKD 240

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   + ++V  L+ KGL   D+G  +++ +   ++   PM ++  KSDGGF Y 
Sbjct: 241  VMGESLYNPMLPEIVADLKAKGLAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYT 300

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+AA + R E  K D  +  +D  Q  H +      +KAG + P    ++   FG++L
Sbjct: 301  TTDIAAAKYRYETLKVDRALVFSDSRQAQHMQQAWLITRKAGYV-PASFSLEHPFFGMML 359

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTRSG TVKL +LLDE + R+ DKL    R T LT  E S   +AVA G +KY
Sbjct: 360  GKDGKPFKTRSGGTVKLKDLLDEAVERA-DKLISA-RSTNLTVAEKSAVVEAVAIGSVKY 417

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            +DLS NR  DYVF +D ML   GNTA Y+ YAYTRI SI   A I+ + L     +  + 
Sbjct: 418  SDLSKNRTTDYVFDWDNMLTFEGNTAPYMQYAYTRIRSIFARAEIDPDTL-----TGEMQ 472

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L  EKE  LA  LL+  + L  V ++   H LC+YLY+++  FS FY+ C  +  D    
Sbjct: 473  LTEEKERTLALKLLQFEEALTAVAKEGMPHILCQYLYELAGIFSSFYEACPMLNAD---- 528

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             + +   RL LA  TAK +K+  D+L I+T
Sbjct: 529  -EAIKHSRLRLASLTAKTLKQGLDLLGIKT 557



 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 152/402 (37%), Positives = 222/402 (55%), Gaps = 42/402 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AMA  K         NP + AQ I          N  ++ ++DK+E+A PG
Sbjct: 21  EFGDYQANGAMAAAKK-----LAMNPREFAQKILD--------NLDVSDMVDKLEIAGPG 67

Query: 183 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL   +  +Q        +  +   QP T      +L+D+SSPN+AKEMHVGHLRS
Sbjct: 68  FINIFLKPSWLAKQANFALQAVNFGIKTAQPQT------ILIDYSSPNVAKEMHVGHLRS 121

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+
Sbjct: 122 TIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEQASEMQLSDLEAFYR 180

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
            +K+ +D D+IF ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+ 
Sbjct: 181 AAKESYDSDQIFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKD 240

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   + ++V  L+ KGL   D+G  +++ +   ++   PM ++  KSDGGF Y 
Sbjct: 241 VMGESLYNPMLPEIVADLKAKGLAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYT 300

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM- 467
           T+D+AA + R E  K D  +  +D R    + QA     K   + +S S +       + 
Sbjct: 301 TTDIAAAKYRYETLKVDRALVFSDSRQAQHMQQAWLITRKAGYVPASFSLEHPFFGMMLG 360

Query: 468 --NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTN 507
               P + R      L D+   AV+ A     DK  S  STN
Sbjct: 361 KDGKPFKTRSGGTVKLKDLLDEAVERA-----DKLISARSTN 397



 Score =  233 bits (595), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 198/333 (59%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AMA  K         NP + AQ I          N  ++ ++DK+E+A PG
Sbjct: 21   EFGDYQANGAMAAAKK-----LAMNPREFAQKILD--------NLDVSDMVDKLEIAGPG 67

Query: 1200 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL   +  +Q        +  +   QP T      +L+D+SSPN+AKEMHVGHLRS
Sbjct: 68   FINIFLKPSWLAKQANFALQAVNFGIKTAQPQT------ILIDYSSPNVAKEMHVGHLRS 121

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+
Sbjct: 122  TIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEQASEMQLSDLEAFYR 180

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
             +K+ +D D+IF ++A   VV LQ  D   +  W+ + D++    Q+ YDRLNVTLTE+ 
Sbjct: 181  AAKESYDSDQIFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQENYDRLNVTLTEKD 240

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   + ++V  L+ KGL   D+G  +++ +   ++   PM ++  KSDGGF Y 
Sbjct: 241  VMGESLYNPMLPEIVADLKAKGLAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYT 300

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+AA + R E  K D  +  +D R    + Q
Sbjct: 301  TTDIAAAKYRYETLKVDRALVFSDSRQAQHMQQ 333


>gi|416230118|ref|ZP_11628241.1| arginyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326561584|gb|EGE11925.1| arginyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 567

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 332/570 (58%), Gaps = 47/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 27   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 73

Query: 573  FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 74   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 127

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 128  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 186

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 187  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 246

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 247  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 306

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+AA   R     AD ++  TD  Q +H +      +KAG + P++  M+   FG++L
Sbjct: 307  TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQAWLITRKAGFV-PDEFVMEHFTFGMML 365

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE + R+   ++ KN   +L+  E     +AVA G +KY
Sbjct: 366  GKDGKPFKTRTGGTVKLADLLDEAIERATTLIEQKN--PDLSAEEKRAVVEAVAIGAVKY 423

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            +DLS NRN DYVF +D ML   GNTA Y+ YAYTRI SI   AG++  D+        + 
Sbjct: 424  SDLSKNRNTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFARAGLDMADI-----GGEIV 478

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  +KE ALA  LL+  +VL+LV +D   H LC+YL++++  FS FY+ C  +  D + K
Sbjct: 479  IHEDKERALAVKLLQFEEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEACPILSSDDKTK 538

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 T RL LA  TAK +K+   +L I+T
Sbjct: 539  -----TSRLRLAALTAKTLKQGLQLLGIKT 563



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 187/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 27  QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 73

Query: 183 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 74  FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 127

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 128 TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 186

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
            +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 187 AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 246

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 247 TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 306

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+AA   R     AD ++  TD R      QA
Sbjct: 307 TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQA 340



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 185/326 (56%), Gaps = 34/326 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 27   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 73

Query: 1200 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 74   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 127

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 128  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 186

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 187  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 246

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 247  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 306

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHR 1451
            T+D+AA   R     AD ++  TD R
Sbjct: 307  TTDIAAAAYRYHTLHADRVILFTDAR 332


>gi|326435569|gb|EGD81139.1| arginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 701

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/411 (50%), Positives = 273/411 (66%), Gaps = 29/411 (7%)

Query: 26  ESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRM 85
           E A++   A   +N KLK++LA LQ+ +  EE ++        +   A   M V      
Sbjct: 9   EFASDSFKALVKENGKLKYQLAHLQQTL--EELRKPAEFKFEDKPDLAVDTMRV------ 60

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
                ++D+    + +AFPE  D   S+     K V   G +QCN AM +    K +G K
Sbjct: 61  -----VADLMRSTIGIAFPEFADVDPSITIPAAK-VKNAGSYQCNAAMNINNKLKKQGVK 114

Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
            NP ++AQ IA      L  NP    V+DK+EVA PGF+NV +++ +   Q   ++  G 
Sbjct: 115 SNPREVAQKIAD----SLPENP----VVDKLEVAGPGFINVHVAKSFVQAQTNKLLRKGA 166

Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
             P +++KL+V+VDFSSPNIAKEMHVGHLRSTIIG++ISR+LE+ GH+  R+NHVGDWGT
Sbjct: 167 LAPPIDRKLKVIVDFSSPNIAKEMHVGHLRSTIIGESISRVLEFAGHETHRVNHVGDWGT 226

Query: 266 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 325
           QFGMLIAHL+D+FPDY TK+PPI DLQAFYK SK  FD+DE FKKRAY   V LQ  DPD
Sbjct: 227 QFGMLIAHLKDEFPDYKTKAPPIGDLQAFYKASKVLFDQDEEFKKRAYGETVKLQSGDPD 286

Query: 326 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD---- 381
              AW++ICDVSRR+FQ IY+RL+VT+ E+GESFYQ  M+ +V  L KKGL+ +DD    
Sbjct: 287 VTLAWQLICDVSRREFQDIYNRLDVTIEEKGESFYQSRMQGVVEELTKKGLV-IDDPENP 345

Query: 382 GRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           GRKI W    ++ +IP+ +VKSDG +TYDTSDLA +R R++EEKADW+VYV
Sbjct: 346 GRKIAWTSAREQTNIPLIVVKSDGAYTYDTSDLATLRYRVQEEKADWVVYV 396



 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/365 (53%), Positives = 255/365 (69%), Gaps = 25/365 (6%)

Query: 481 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
           ++D+    + +AFPE  D   S+     K V   G +QCN AM +    K +G K NP +
Sbjct: 61  VADLMRSTIGIAFPEFADVDPSITIPAAK-VKNAGSYQCNAAMNINNKLKKQGVKSNPRE 119

Query: 541 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
           +AQ IA      L  NP    V+DK+EVA PGF+NV +++ +   Q   ++  G   P +
Sbjct: 120 VAQKIAD----SLPENP----VVDKLEVAGPGFINVHVAKSFVQAQTNKLLRKGALAPPI 171

Query: 601 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 660
           ++KL+V+VDFSSPNIAKEMHVGHLRSTIIG++ISR+LE+ GH+  R+NHVGDWGTQFGML
Sbjct: 172 DRKLKVIVDFSSPNIAKEMHVGHLRSTIIGESISRVLEFAGHETHRVNHVGDWGTQFGML 231

Query: 661 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
           IAHL+D+FPDY TK+PPI DLQAFYK SK  FD+DE FKKRAY   V LQ  DPD   AW
Sbjct: 232 IAHLKDEFPDYKTKAPPIGDLQAFYKASKVLFDQDEEFKKRAYGETVKLQSGDPDVTLAW 291

Query: 721 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD----GRKIM 776
           ++ICDVSRR+FQ IY+RL+VT+ E+GESFYQ  M+ +V  L KKGL+ +DD    GRKI 
Sbjct: 292 QLICDVSRREFQDIYNRLDVTIEEKGESFYQSRMQGVVEELTKKGLV-IDDPENPGRKIA 350

Query: 777 W--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
           W    ++ +IP+ +VKSDG +TYDTSDLA +R R++EEKADW+VYV  +GQ        +
Sbjct: 351 WTSAREQTNIPLIVVKSDGAYTYDTSDLATLRYRVQEEKADWVVYV--VGQ-------SQ 401

Query: 835 CAKKA 839
           C+ KA
Sbjct: 402 CSAKA 406



 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/346 (55%), Positives = 247/346 (71%), Gaps = 16/346 (4%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            ++D+    + +AFPE  D   S+     K V   G +QCN AM +    K +G K NP +
Sbjct: 61   VADLMRSTIGIAFPEFADVDPSITIPAAK-VKNAGSYQCNAAMNINNKLKKQGVKSNPRE 119

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
            +AQ IA      L  NP    V+DK+EVA PGF+NV +++ +   Q   ++  G   P +
Sbjct: 120  VAQKIAD----SLPENP----VVDKLEVAGPGFINVHVAKSFVQAQTNKLLRKGALAPPI 171

Query: 1228 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 1287
            ++KL+V+VDFSSPNIAKEMHVGHLRSTIIG++ISR+LE+ GH+  R+NHVGDWGTQFGML
Sbjct: 172  DRKLKVIVDFSSPNIAKEMHVGHLRSTIIGESISRVLEFAGHETHRVNHVGDWGTQFGML 231

Query: 1288 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            IAHL+D+FPDY TK+PPI DLQAFYK SK  FD+DE FKKRAY   V LQ  DPD   AW
Sbjct: 232  IAHLKDEFPDYKTKAPPIGDLQAFYKASKVLFDQDEEFKKRAYGETVKLQSGDPDVTLAW 291

Query: 1348 EMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD----GRKIM 1403
            ++ICDVSRR+FQ IY+RL+VT+ E+GESFYQ  M+ +V  L KKGL+ +DD    GRKI 
Sbjct: 292  QLICDVSRREFQDIYNRLDVTIEEKGESFYQSRMQGVVEELTKKGLV-IDDPENPGRKIA 350

Query: 1404 W--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            W    ++ +IP+ +VKSDG +TYDTSDLA +R R++EEKADW+VYV
Sbjct: 351  WTSAREQTNIPLIVVKSDGAYTYDTSDLATLRYRVQEEKADWVVYV 396


>gi|432517945|ref|ZP_19755137.1| arginyl-tRNA synthetase [Escherichia coli KTE228]
 gi|433158909|ref|ZP_20343756.1| arginyl-tRNA synthetase [Escherichia coli KTE177]
 gi|431051993|gb|ELD61655.1| arginyl-tRNA synthetase [Escherichia coli KTE228]
 gi|431678943|gb|ELJ44861.1| arginyl-tRNA synthetase [Escherichia coli KTE177]
          Length = 577

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNSIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNSIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (595), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNSIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|315634078|ref|ZP_07889367.1| arginine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477328|gb|EFU68071.1| arginine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 577

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/568 (40%), Positives = 334/568 (58%), Gaps = 41/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQS+             L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----LNPREFAQSVLD--------KAELQDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL   +    + D I   VQ P L     +K  V+VD+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLKDTW----LADNISRAVQDPKLGVHNPEKQTVVVDYSSPNVAKEMHVGHLRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +
Sbjct: 138  IGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            KK +DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLT++   
Sbjct: 197  KKHYDEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTDKDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTS 800
            GES Y   +  +V  L+K+GL   DDG  +++ +   ++   PM ++  K DGGF Y T+
Sbjct: 257  GESLYNPMLPGIVEDLKKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTT 316

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+AA + R E  KA+  +  +D  Q  H +      +KAG + P+  +++   FG++LG+
Sbjct: 317  DIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFQLEHKNFGMMLGK 375

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D K FKTRSGDTVKL++LLDE + R+   +  K+  T L+  E ++  +AV  G +KYAD
Sbjct: 376  DGKPFKTRSGDTVKLADLLDEAIERAGVLISQKS--TALSEQEKADVIEAVGIGSVKYAD 433

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  DYVF +D ML   GNTA Y+ YAYTRI SI   + I   ++  A     +S+ 
Sbjct: 434  LSKNRTTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNRSQIALSEVEQAT----LSIT 489

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             EKE ALA  LL+  + + +V ++   H LC YLY+++  FS FY++C  +  D      
Sbjct: 490  DEKERALAIKLLQFEEAVQVVGKEGTPHVLCAYLYELAGVFSSFYEHCPILNNDDH---- 545

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             V   RL LA  T + +K+  D+L I+T
Sbjct: 546  QVKLSRLKLALLTERTLKQGLDLLGIKT 573



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 195/332 (58%), Gaps = 30/332 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQS+             L  + +K E+A PG
Sbjct: 35  QFGDYQANGIMPAAKKLG-----LNPREFAQSVLD--------KAELQDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL   +    + D I   VQ P L     +K  V+VD+SSPN+AKEMHVGHLRSTI
Sbjct: 82  FINIFLKDTW----LADNISRAVQDPKLGVHNPEKQTVVVDYSSPNVAKEMHVGHLRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +
Sbjct: 138 IGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           KK +DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLT++   
Sbjct: 197 KKHYDEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTDKDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTS 410
           GES Y   +  +V  L+K+GL   DDG  +++ +   ++   PM ++  K DGGF Y T+
Sbjct: 257 GESLYNPMLPGIVEDLKKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTT 316

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           D+AA + R E  KA+  +  +D R    + QA
Sbjct: 317 DIAAAKYRYETLKANRALVFSDTRQSQHMQQA 348



 Score =  236 bits (603), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 194/331 (58%), Gaps = 30/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQS+             L  + +K E+A PG
Sbjct: 35   QFGDYQANGIMPAAKKLG-----LNPREFAQSVLD--------KAELQDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL   +    + D I   VQ P L     +K  V+VD+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLKDTW----LADNISRAVQDPKLGVHNPEKQTVVVDYSSPNVAKEMHVGHLRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD + R LE+LG++V+R NHVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+ +
Sbjct: 138  IGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYLE-KMENEHASEMELSDLEAFYRAA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            KK +DED +F ++A   VV LQ  D   +  W+ +  ++ +  Q  YDRLNVTLT++   
Sbjct: 197  KKHYDEDPVFAEKARNYVVKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTDKDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTS 1427
            GES Y   +  +V  L+K+GL   DDG  +++ +   ++   PM ++  K DGGF Y T+
Sbjct: 257  GESLYNPMLPGIVEDLKKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTT 316

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+AA + R E  KA+  +  +D R    + Q
Sbjct: 317  DIAAAKYRYETLKANRALVFSDTRQSQHMQQ 347


>gi|157158431|ref|YP_001463181.1| arginyl-tRNA synthetase [Escherichia coli E24377A]
 gi|166980181|sp|A7ZN02.1|SYR_ECO24 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|157080461|gb|ABV20169.1| arginyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 577

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/567 (40%), Positives = 322/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLLGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A IN E L  A    PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAA----PVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 190/333 (57%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLLGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  231 bits (590), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 188/330 (56%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLLGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|416250692|ref|ZP_11637372.1| arginyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|421779761|ref|ZP_16216253.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326574023|gb|EGE23972.1| arginyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|407813471|gb|EKF84253.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 575

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 332/570 (58%), Gaps = 47/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 136  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+AA   R     AD ++  TD  Q +H +      +KAG + P++  M+   FG++L
Sbjct: 315  TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQAWLITRKAGFV-PDEFVMEHFTFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE + R+   ++ KN   +L+  E     +AVA G +KY
Sbjct: 374  GKDGKPFKTRTGGTVKLADLLDEAIERATTLIEQKN--PDLSAEEKRAVVEAVAIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            +DLS NRN DYVF +D ML   GNTA Y+ YAYTRI SI   AG++  D+        + 
Sbjct: 432  SDLSKNRNTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFARAGLDMADI-----GGEIV 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  +KE ALA  LL+  +VL+LV +D   H LC+YL++++  FS FY+ C  +  D + K
Sbjct: 487  IHEDKERALAVKLLQFEEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEACPILSSDDKTK 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 T RL LA  TAK +K+   +L I+T
Sbjct: 547  -----TSRLRLAALTAKTLKQGLQLLGIKT 571



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 187/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82  FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 136 TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
            +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195 AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255 TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+AA   R     AD ++  TD R      QA
Sbjct: 315 TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQA 348



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 185/326 (56%), Gaps = 34/326 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 136  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHR 1451
            T+D+AA   R     AD ++  TD R
Sbjct: 315  TTDIAAAAYRYHTLHADRVILFTDAR 340


>gi|440231188|ref|YP_007344981.1| arginyl-tRNA synthetase [Serratia marcescens FGI94]
 gi|440052893|gb|AGB82796.1| arginyl-tRNA synthetase [Serratia marcescens FGI94]
          Length = 576

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/608 (37%), Positives = 340/608 (55%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ + +++         L  +  K+E+A PGFVN+FL   +  +Q   ++   
Sbjct: 53   -MPPRQLAEKVVALL--------QLDGIASKVEIAGPGFVNIFLDAAWVAQQADAVLRAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V P T      +++D+S+PN+AKEMHVGH+RSTIIGD  +R   +LGH V+R N
Sbjct: 104  KLGIAPVAPQT------IVIDYSAPNVAKEMHVGHVRSTIIGDAAARTQSFLGHKVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+K+ +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KVQNEHADEMELSDLEQFYREAKRHYDEDAEFAERARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D    K W  + D++    QK Y RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDDYCLKMWRKLVDITMAQNQKTYQRLNVTLTEDDVMGESLYNAMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 277  LAVESEGATVVFLDEYKNKDGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG T+KLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHMFGMMLGKDGKPFKTRSGGTIKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   ++   EL +   AV  G IKYADLS +R  DY+F +D ML   
Sbjct: 396  EAIERAGKLIAEKN--PDMPADELQKVVNAVGIGAIKYADLSKSRTTDYIFDWDNMLSFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+AS+ + AG++  DL     + P+++  E+E ALA  LL+  + + +
Sbjct: 454  GNTAPYMQYAYTRVASVFKRAGVDESDL-----TLPLAMTEEREIALATRLLQFEETITV 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  D+E         RL LA  TAK +K  
Sbjct: 509  VAREGTPHVMCSYLYDLAGLFSGFYEHCQILNADSE----EARQSRLKLALLTAKTLKTG 564

Query: 1061 FDILNIRT 1068
             D L I T
Sbjct: 565  LDTLGIET 572



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 204/372 (54%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ + +++         L  +  K+E+A PGFVN+FL   +  +Q   ++   
Sbjct: 53  -MPPRQLAEKVVALL--------QLDGIASKVEIAGPGFVNIFLDAAWVAQQADAVLRAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V P T      +++D+S+PN+AKEMHVGH+RSTIIGD  +R   +LGH V+R N
Sbjct: 104 KLGIAPVAPQT------IVIDYSAPNVAKEMHVGHVRSTIIGDAAARTQSFLGHKVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+K+ +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KVQNEHADEMELSDLEQFYREAKRHYDEDAEFAERARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D    K W  + D++    QK Y RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDDYCLKMWRKLVDITMAQNQKTYQRLNVTLTEDDVMGESLYNAMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 277 LAVESEGATVVFLDEYKNKDGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  226 bits (577), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 133/371 (35%), Positives = 203/371 (54%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQALLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ + +++         L  +  K+E+A PGFVN+FL   +  +Q   ++   
Sbjct: 53   -MPPRQLAEKVVALL--------QLDGIASKVEIAGPGFVNIFLDAAWVAQQADAVLRAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V P T      +++D+S+PN+AKEMHVGH+RSTIIGD  +R   +LGH V+R N
Sbjct: 104  KLGIAPVAPQT------IVIDYSAPNVAKEMHVGHVRSTIIGDAAARTQSFLGHKVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+K+ +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KVQNEHADEMELSDLEQFYREAKRHYDEDAEFAERARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D    K W  + D++    QK Y RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDDYCLKMWRKLVDITMAQNQKTYQRLNVTLTEDDVMGESLYNAMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 277  LAVESEGATVVFLDEYKNKDGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|397165217|ref|ZP_10488670.1| arginine--tRNA ligase [Enterobacter radicincitans DSM 16656]
 gi|396093324|gb|EJI90881.1| arginine--tRNA ligase [Enterobacter radicincitans DSM 16656]
          Length = 577

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 328/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        + SL  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLSLDGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL+  +   ++   + +   GV  P   +   +++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLAPEFLAAEVNQALKSERLGVTQP---QPQTIVIDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ K  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLELKQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            K +DED  F +RA   VV LQ  D   ++ W  + D++    Q+ Y+RLNVTLT +   G
Sbjct: 198  KHYDEDAAFAERARGYVVKLQGGDEYCREMWRKLVDITMSQNQQTYERLNVTLTRKDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   E+   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PEMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AG+    L    ++ PV+
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGLEESVL----ENAPVT 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  E+E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +    E  
Sbjct: 488  IGEERESQLAARLLQFEETLNVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAGDE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA  TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 195/334 (58%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        + SL  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLSLDGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL+  +   ++   + +   GV  P   +   +++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLAPEFLAAEVNQALKSERLGVTQP---QPQTIVIDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ K  +   +   +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLELKQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           K +DED  F +RA   VV LQ  D   ++ W  + D++    Q+ Y+RLNVTLT +   G
Sbjct: 198 KHYDEDAAFAERARGYVVKLQGGDEYCREMWRKLVDITMSQNQQTYERLNVTLTRKDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 194/333 (58%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        + SL  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLSLDGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL+  +   ++   + +   GV  P   +   +++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLAPEFLAAEVNQALKSERLGVTQP---QPQTIVIDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ K  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLELKQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            K +DED  F +RA   VV LQ  D   ++ W  + D++    Q+ Y+RLNVTLT +   G
Sbjct: 198  KHYDEDAAFAERARGYVVKLQGGDEYCREMWRKLVDITMSQNQQTYERLNVTLTRKDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|416155535|ref|ZP_11603947.1| arginyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|416254535|ref|ZP_11638801.1| arginyl-tRNA synthetase [Moraxella catarrhalis O35E]
 gi|326577009|gb|EGE26904.1| arginyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326577465|gb|EGE27349.1| arginyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 575

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 332/570 (58%), Gaps = 47/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 136  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+AA   R     AD ++  TD  Q +H +      +KAG + P++  M+   FG++L
Sbjct: 315  TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQAWLITRKAGFV-PDEFVMEHFTFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE + R+   ++ KN   +L+  E     +AVA G +KY
Sbjct: 374  GKDGKPFKTRTGGTVKLADLLDEAIERATTLIEQKN--PDLSAEEKRAVVEAVAIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            +DLS NRN DYVF +D ML   GNTA Y+ YAYTRI SI   AG++  D+        + 
Sbjct: 432  SDLSKNRNTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFVRAGLDMADI-----GGEIV 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  +KE ALA  LL+  +VL+LV +D   H LC+YL++++  FS FY+ C  +  D + K
Sbjct: 487  IHEDKERALAVKLLQFEEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEACPILSSDDKTK 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 T RL LA  TAK +K+   +L I+T
Sbjct: 547  -----TSRLRLAALTAKTLKQGLQLLGIKT 571



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 187/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82  FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 136 TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
            +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195 AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255 TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+AA   R     AD ++  TD R      QA
Sbjct: 315 TTDIAAAAYRYHTLHADRVILFTDARQTLHAQQA 348



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 185/326 (56%), Gaps = 34/326 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----INPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQI------KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL   +  +        + + VN  Q  T      V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNAAQNDT------VVVDYSSPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD++ R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+
Sbjct: 136  TIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
             +K  +D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT   
Sbjct: 195  AAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDD 254

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  TMGESLYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHR 1451
            T+D+AA   R     AD ++  TD R
Sbjct: 315  TTDIAAAAYRYHTLHADRVILFTDAR 340


>gi|251792745|ref|YP_003007471.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|422336289|ref|ZP_16417262.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
 gi|247534138|gb|ACS97384.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|353346475|gb|EHB90760.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
          Length = 577

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/606 (39%), Positives = 344/606 (56%), Gaps = 45/606 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+    A+  A    G  +   A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQSILSEKIKQAMLAA----GADSQCEALVRQSGKVQFGDYQANGIMPAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ + +           L  + +K E+A PGF+N+FL   +  E I     N 
Sbjct: 53   -INPREFAQLVLA--------KAELQDITEKTEIAGPGFINIFLKDGWLAENIG----NA 99

Query: 595  VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
            V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHV
Sbjct: 100  VKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHV 159

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIA+L+ K  +       + DL+AFY+ +KK +DED IF ++A   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMENEHASEMELCDLEAFYRAAKKHYDEDPIFAEKARNYVVKLQ 218

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 767
              D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL 
Sbjct: 219  SGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLA 278

Query: 768  ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              DDG  +++      +D GS+ + + K DGGF Y T+D+AA + R E  KA+  +  +D
Sbjct: 279  VEDDGAWVVYLDEFKNKDGGSMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSD 338

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q  H +      +KAG   P+  +++   FG++LG+D K FKTRSGDTVKL++LLDE 
Sbjct: 339  TRQSQHMQQAWLITRKAG-YAPDSFQLEHKNFGMMLGKDGKPFKTRSGDTVKLADLLDEA 397

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            + R+   +  K+  T L+  E ++  +AV  G +KYADLS NR  DYVF +D ML   GN
Sbjct: 398  IERAGVLISQKS--TALSDQEKADVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLSFEGN 455

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA Y+ YAYTRI SI   + I   ++  A     +S+  EKE ALA  LL+  + + +V 
Sbjct: 456  TAPYMQYAYTRIRSIFNRSQIALSEVEQA----QLSITDEKERALAIKLLQFEEAIQIVA 511

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
            +D   H LC YLY+++  FS FY++C  +  + +     V   RL LA  T + +K+   
Sbjct: 512  KDGTPHVLCTYLYELAGVFSSFYEHCPILNNEDQ----QVKLSRLKLALLTERTLKQGLG 567

Query: 1063 ILNIRT 1068
            +L I+T
Sbjct: 568  LLGIKT 573



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/370 (39%), Positives = 206/370 (55%), Gaps = 34/370 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+    A+  A    G  +   A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQSILSEKIKQAMLAA----GADSQCEALVRQSGKVQFGDYQANGIMPAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ + +           L  + +K E+A PGF+N+FL   +  E I     N 
Sbjct: 53  -INPREFAQLVLA--------KAELQDITEKTEIAGPGFINIFLKDGWLAENIG----NA 99

Query: 205 VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
           V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHV
Sbjct: 100 VKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHV 159

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGMLIA+L+ K  +       + DL+AFY+ +KK +DED IF ++A   VV LQ
Sbjct: 160 GDWGTQFGMLIAYLE-KMENEHASEMELCDLEAFYRAAKKHYDEDPIFAEKARNYVVKLQ 218

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 377
             D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL 
Sbjct: 219 SGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLA 278

Query: 378 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             DDG  +++      +D GS+ + + K DGGF Y T+D+AA + R E  KA+  +  +D
Sbjct: 279 VEDDGAWVVYLDEFKNKDGGSMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSD 338

Query: 433 HRSYHQVLQA 442
            R    + QA
Sbjct: 339 TRQSQHMQQA 348



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/369 (39%), Positives = 205/369 (55%), Gaps = 34/369 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+    A+  A    G  +   A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQSILSEKIKQAMLAA----GADSQCEALVRQSGKVQFGDYQANGIMPAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ + +           L  + +K E+A PGF+N+FL   +  E I     N 
Sbjct: 53   -INPREFAQLVLA--------KAELQDITEKTEIAGPGFINIFLKDGWLAENIG----NA 99

Query: 1222 VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
            V+ P L      K  V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHV
Sbjct: 100  VKDPKLGIHHQDKQTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHV 159

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLIA+L+ K  +       + DL+AFY+ +KK +DED IF ++A   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMENEHASEMELCDLEAFYRAAKKHYDEDPIFAEKARNYVVKLQ 218

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 1394
              D   +  W+ +  ++ +  Q  YDRLNVTLTE+   GES Y   +  +V  L+K+GL 
Sbjct: 219  SGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLA 278

Query: 1395 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              DDG  +++      +D GS+ + + K DGGF Y T+D+AA + R E  KA+  +  +D
Sbjct: 279  VEDDGAWVVYLDEFKNKDGGSMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSD 338

Query: 1450 HRSYHQVLQ 1458
             R    + Q
Sbjct: 339  TRQSQHMQQ 347


>gi|432947745|ref|ZP_20142901.1| arginyl-tRNA synthetase [Escherichia coli KTE196]
 gi|433043469|ref|ZP_20230969.1| arginyl-tRNA synthetase [Escherichia coli KTE117]
 gi|431457723|gb|ELH38060.1| arginyl-tRNA synthetase [Escherichia coli KTE196]
 gi|431556440|gb|ELI30219.1| arginyl-tRNA synthetase [Escherichia coli KTE117]
          Length = 577

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DED+ F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDDEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DED+ F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDDEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (594), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DED+ F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDDEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|170683284|ref|YP_001743368.1| arginyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218699552|ref|YP_002407181.1| arginyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218705377|ref|YP_002412896.1| arginyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293405370|ref|ZP_06649362.1| arginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298381013|ref|ZP_06990612.1| arginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300899127|ref|ZP_07117409.1| arginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|301018279|ref|ZP_07182790.1| arginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331663376|ref|ZP_08364286.1| arginine--tRNA ligase [Escherichia coli TA143]
 gi|386624505|ref|YP_006144233.1| arginyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
 gi|387607496|ref|YP_006096352.1| arginyl-tRNA synthetase [Escherichia coli 042]
 gi|419916390|ref|ZP_14434699.1| arginyl-tRNA synthetase [Escherichia coli KD2]
 gi|419932446|ref|ZP_14449756.1| arginyl-tRNA synthetase [Escherichia coli 576-1]
 gi|432353791|ref|ZP_19597065.1| arginyl-tRNA synthetase [Escherichia coli KTE2]
 gi|432402144|ref|ZP_19644897.1| arginyl-tRNA synthetase [Escherichia coli KTE26]
 gi|432426315|ref|ZP_19668820.1| arginyl-tRNA synthetase [Escherichia coli KTE181]
 gi|432460932|ref|ZP_19703083.1| arginyl-tRNA synthetase [Escherichia coli KTE204]
 gi|432476069|ref|ZP_19718069.1| arginyl-tRNA synthetase [Escherichia coli KTE208]
 gi|432489486|ref|ZP_19731367.1| arginyl-tRNA synthetase [Escherichia coli KTE213]
 gi|432538043|ref|ZP_19774946.1| arginyl-tRNA synthetase [Escherichia coli KTE235]
 gi|432543447|ref|ZP_19780294.1| arginyl-tRNA synthetase [Escherichia coli KTE236]
 gi|432548937|ref|ZP_19785709.1| arginyl-tRNA synthetase [Escherichia coli KTE237]
 gi|432602401|ref|ZP_19838645.1| arginyl-tRNA synthetase [Escherichia coli KTE66]
 gi|432622078|ref|ZP_19858112.1| arginyl-tRNA synthetase [Escherichia coli KTE76]
 gi|432631615|ref|ZP_19867544.1| arginyl-tRNA synthetase [Escherichia coli KTE80]
 gi|432641260|ref|ZP_19877097.1| arginyl-tRNA synthetase [Escherichia coli KTE83]
 gi|432666245|ref|ZP_19901827.1| arginyl-tRNA synthetase [Escherichia coli KTE116]
 gi|432770843|ref|ZP_20005187.1| arginyl-tRNA synthetase [Escherichia coli KTE50]
 gi|432774965|ref|ZP_20009247.1| arginyl-tRNA synthetase [Escherichia coli KTE54]
 gi|432815575|ref|ZP_20049360.1| arginyl-tRNA synthetase [Escherichia coli KTE115]
 gi|432839501|ref|ZP_20072988.1| arginyl-tRNA synthetase [Escherichia coli KTE140]
 gi|432869079|ref|ZP_20089874.1| arginyl-tRNA synthetase [Escherichia coli KTE147]
 gi|432886818|ref|ZP_20100907.1| arginyl-tRNA synthetase [Escherichia coli KTE158]
 gi|432912919|ref|ZP_20118729.1| arginyl-tRNA synthetase [Escherichia coli KTE190]
 gi|433018837|ref|ZP_20207082.1| arginyl-tRNA synthetase [Escherichia coli KTE105]
 gi|433053383|ref|ZP_20240578.1| arginyl-tRNA synthetase [Escherichia coli KTE122]
 gi|433068160|ref|ZP_20254961.1| arginyl-tRNA synthetase [Escherichia coli KTE128]
 gi|433178522|ref|ZP_20362934.1| arginyl-tRNA synthetase [Escherichia coli KTE82]
 gi|433203454|ref|ZP_20387235.1| arginyl-tRNA synthetase [Escherichia coli KTE95]
 gi|226701377|sp|B7NS42.1|SYR_ECO7I RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|226701379|sp|B7NBM7.1|SYR_ECOLU RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|226701380|sp|B1LCZ5.1|SYR_ECOSM RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|170521002|gb|ACB19180.1| arginyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218369538|emb|CAR17307.1| arginyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218432474|emb|CAR13367.1| arginyl-tRNA synthetase [Escherichia coli UMN026]
 gi|284921796|emb|CBG34869.1| arginyl-tRNA synthetase [Escherichia coli 042]
 gi|291427578|gb|EFF00605.1| arginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298278455|gb|EFI19969.1| arginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300357245|gb|EFJ73115.1| arginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300399749|gb|EFJ83287.1| arginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331059175|gb|EGI31152.1| arginine--tRNA ligase [Escherichia coli TA143]
 gi|349738243|gb|AEQ12949.1| arginyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
 gi|388396114|gb|EIL57243.1| arginyl-tRNA synthetase [Escherichia coli KD2]
 gi|388417361|gb|EIL77215.1| arginyl-tRNA synthetase [Escherichia coli 576-1]
 gi|430876032|gb|ELB99553.1| arginyl-tRNA synthetase [Escherichia coli KTE2]
 gi|430926974|gb|ELC47561.1| arginyl-tRNA synthetase [Escherichia coli KTE26]
 gi|430956655|gb|ELC75329.1| arginyl-tRNA synthetase [Escherichia coli KTE181]
 gi|430989645|gb|ELD06099.1| arginyl-tRNA synthetase [Escherichia coli KTE204]
 gi|431006010|gb|ELD21017.1| arginyl-tRNA synthetase [Escherichia coli KTE208]
 gi|431021522|gb|ELD34845.1| arginyl-tRNA synthetase [Escherichia coli KTE213]
 gi|431069957|gb|ELD78277.1| arginyl-tRNA synthetase [Escherichia coli KTE235]
 gi|431074670|gb|ELD82218.1| arginyl-tRNA synthetase [Escherichia coli KTE236]
 gi|431080232|gb|ELD87037.1| arginyl-tRNA synthetase [Escherichia coli KTE237]
 gi|431140975|gb|ELE42740.1| arginyl-tRNA synthetase [Escherichia coli KTE66]
 gi|431159777|gb|ELE60321.1| arginyl-tRNA synthetase [Escherichia coli KTE76]
 gi|431171083|gb|ELE71264.1| arginyl-tRNA synthetase [Escherichia coli KTE80]
 gi|431183525|gb|ELE83341.1| arginyl-tRNA synthetase [Escherichia coli KTE83]
 gi|431201620|gb|ELF00317.1| arginyl-tRNA synthetase [Escherichia coli KTE116]
 gi|431316043|gb|ELG03942.1| arginyl-tRNA synthetase [Escherichia coli KTE50]
 gi|431318680|gb|ELG06375.1| arginyl-tRNA synthetase [Escherichia coli KTE54]
 gi|431364631|gb|ELG51162.1| arginyl-tRNA synthetase [Escherichia coli KTE115]
 gi|431389653|gb|ELG73364.1| arginyl-tRNA synthetase [Escherichia coli KTE140]
 gi|431410995|gb|ELG94138.1| arginyl-tRNA synthetase [Escherichia coli KTE147]
 gi|431416863|gb|ELG99334.1| arginyl-tRNA synthetase [Escherichia coli KTE158]
 gi|431440348|gb|ELH21677.1| arginyl-tRNA synthetase [Escherichia coli KTE190]
 gi|431532900|gb|ELI09404.1| arginyl-tRNA synthetase [Escherichia coli KTE105]
 gi|431571779|gb|ELI44649.1| arginyl-tRNA synthetase [Escherichia coli KTE122]
 gi|431585852|gb|ELI57799.1| arginyl-tRNA synthetase [Escherichia coli KTE128]
 gi|431704886|gb|ELJ69511.1| arginyl-tRNA synthetase [Escherichia coli KTE82]
 gi|431722522|gb|ELJ86488.1| arginyl-tRNA synthetase [Escherichia coli KTE95]
          Length = 577

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (594), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|423103686|ref|ZP_17091388.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
 gi|376385328|gb|EHS98049.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
          Length = 577

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   A+ ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYENLHAERVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPTDELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDERALAAA----PVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  E+E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  ITEEREAQLAARLLQFEETLTVVAREGTPHVMCSYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 192/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   A+ ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYENLHAERVLYYIDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   A+ ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYENLHAERVLYYIDSRQHQHLMQ 347


>gi|423115035|ref|ZP_17102726.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
 gi|376383910|gb|EHS96637.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
          Length = 577

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/571 (40%), Positives = 323/571 (56%), Gaps = 47/571 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII----VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL   +  E +   +    +   QPP       V+VD+S+PN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPPAQT----VVVDYSAPNVAKEMHVGHLRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 745
            KK +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     
Sbjct: 197  KKYYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTY 797
            GES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y
Sbjct: 257  GESLYNPMLPGIVADLKDKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLY 313

Query: 798  DTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
             T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++
Sbjct: 314  TTTDIACAKYRYENLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMM 372

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIK 917
            LG+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +K
Sbjct: 373  LGKDGKPFKTRAGGTVKLADLLDESLERARRLVAEKN--PDMPADELEKLANAVGIGAVK 430

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
            YADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L  A    PV
Sbjct: 431  YADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESALVAA----PV 486

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1037
             +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E 
Sbjct: 487  VITEDREAQLAARLLQFEETLTVVAREGTPHVMCSYLYDLAGLFSGFYEHCPILSAESE- 545

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                    RL LA  TAK +K   D L I T
Sbjct: 546  ---ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  240 bits (612), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 192/335 (57%), Gaps = 36/335 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII----VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL   +  E +   +    +   QPP       V+VD+S+PN+AKEMHVGHLRSTI
Sbjct: 82  FINIFLDPAFLAENVSSALKSERLGVAQPPAQT----VVVDYSAPNVAKEMHVGHLRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+
Sbjct: 138 IGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 355
           KK +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     
Sbjct: 197 KKYYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTY 407
           GES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y
Sbjct: 257 GESLYNPMLPGIVADLKDKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLY 313

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 314 TTTDIACAKYRYENLHADRVLYYIDSRQHQHLMQA 348



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 36/334 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII----VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL   +  E +   +    +   QPP       V+VD+S+PN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPPAQT----VVVDYSAPNVAKEMHVGHLRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 1372
            KK +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     
Sbjct: 197  KKYYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTY 1424
            GES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y
Sbjct: 257  GESLYNPMLPGIVADLKDKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLY 313

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 314  TTTDIACAKYRYENLHADRVLYYIDSRQHQHLMQ 347


>gi|449327918|gb|AGE94219.1| arginyl-tRNA synthetase [Citrobacter amalonaticus Y19]
          Length = 577

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P    K  V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAKHVEQALTSDRLGVAKPA---KQTVVIDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  R R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACARYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVSEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R +G++  DL     +  V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKSGLDESDL----ANAKVQ 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  LSEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA  TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  237 bits (604), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/334 (40%), Positives = 190/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P    K  V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAKHVEQALTSDRLGVAKPA---KQTVVIDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  R R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACARYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P    K  V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAKHVEQALTSDRLGVAKPA---KQTVVIDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  R R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACARYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|120600411|ref|YP_964985.1| arginyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166232844|sp|A1RP36.1|SYR_SHESW RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|120560504|gb|ABM26431.1| arginyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 581

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/567 (40%), Positives = 336/567 (59%), Gaps = 43/567 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K+       KNP ++AQ I       + T P+ A  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASA-FVAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAHLELSDLETFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  + + ++ +GFG + GED 
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVREDMS-LEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTRSG  VKL +LL+E   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRSGGVVKLVDLLEEANVRALELVRSKN--PDMDEETLAEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI-ARTAGINSEDLRVAAQSTPVSLEH 981
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I  R  G++    ++        LEH
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRVTGLDLSQAKIV-------LEH 494

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            EKE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D + +   
Sbjct: 495  EKEKDLGNKLAQFGEILNRVVDKGQPHVLCAYLYELAGAFSSFYEACPVLAADNDEQ--- 551

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RLLL++ TA+ ++K  ++L I T
Sbjct: 552  -KNSRLLLSQLTARTLQKGLNLLGIET 577



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 194/322 (60%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K+       KNP ++AQ I       + T P+ A  + K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASA-FVAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145 SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAHLELSDLETFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265 SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSNVLKADRVLYFVDLR 346



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 194/322 (60%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K+       KNP ++AQ I       + T P+ A  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQLI-------IDTLPASA-FVAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F++     +Q+++ + +   G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFINDSALADQLQNAVNDEHLGIKLPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAHLELSDLETFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYARLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTESNGAKVVFQEAFRNKEGEPLPVIIQKADGGYLYATSDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLR 346


>gi|300723081|ref|YP_003712379.1| arginine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629596|emb|CBJ90199.1| arginine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 576

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/611 (38%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  +HA+  A    G    S A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSDKISHALIAA----GAPAGSEAHVRQSAKAQFGDYQANGVMAAAKKVG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------K 588
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL + +    +      K
Sbjct: 53   -MPPRQLAEKVVGLL--------DLQGIASKIEIAGPGFINIFLDKDWIATHLETALKDK 103

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + ++ V P T      +++D+S+PN+AK+MH+GH+RSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGISPVNPQT------IVIDYSAPNVAKQMHIGHIRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            H+GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV 
Sbjct: 158  HLGDWGTQFGMLIAYLE-KVQNENASDMALADLEEFYREAKKTYDEDEEFAIRARSYVVR 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W  + D++    Q+ Y+RLNVTLTE+   GES Y   +  +V  L++KG
Sbjct: 217  LQGGDEYCRTMWRKLVDITMSQNQETYNRLNVTLTEKDMMGESLYNDMLPDVVADLKQKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESDGATVVYLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHEVLHADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P    ++   FG++LG+D K FKTR+G TVKLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYI-PESLSLEHHMFGMMLGKDGKPFKTRAGGTVKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   +++KN   ++   EL +  +AV  G +KYADLS +R  DYVF +D ML
Sbjct: 393  LLDEAIERADTLIREKN--PDMPEDELKKVIEAVGIGAVKYADLSKSRTTDYVFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ SI + A I+   L     + PV L   +E  LA  LL+  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVNSIFKRAEIDESSL-----TQPVILNEGREQTLATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY++C  +  D+E     +   RL LA  TAK +
Sbjct: 506  ITTVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNADSE----EIRQSRLKLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  + L I+T
Sbjct: 562  KQGLETLGIQT 572



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/375 (37%), Positives = 209/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  +HA+  A    G    S A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQAILSDKISHALIAA----GAPAGSEAHVRQSAKAQFGDYQANGVMAAAKKVG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------K 198
              P  +A+ +  ++         L  +  KIE+A PGF+N+FL + +    +      K
Sbjct: 53  -MPPRQLAEKVVGLL--------DLQGIASKIEIAGPGFINIFLDKDWIATHLETALKDK 103

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + ++ V P T      +++D+S+PN+AK+MH+GH+RSTIIGD  +R LE+LGH+V+R N
Sbjct: 104 KLGISPVNPQT------IVIDYSAPNVAKQMHIGHIRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           H+GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV 
Sbjct: 158 HLGDWGTQFGMLIAYLE-KVQNENASDMALADLEEFYREAKKTYDEDEEFAIRARSYVVR 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W  + D++    Q+ Y+RLNVTLTE+   GES Y   +  +V  L++KG
Sbjct: 217 LQGGDEYCRTMWRKLVDITMSQNQETYNRLNVTLTEKDMMGESLYNDMLPDVVADLKQKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESDGATVVYLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHEVLHADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  239 bits (610), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 208/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  +HA+  A    G    S A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSDKISHALIAA----GAPAGSEAHVRQSAKAQFGDYQANGVMAAAKKVG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------K 1215
               P  +A+ +  ++         L  +  KIE+A PGF+N+FL + +    +      K
Sbjct: 53   -MPPRQLAEKVVGLL--------DLQGIASKIEIAGPGFINIFLDKDWIATHLETALKDK 103

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + ++ V P T      +++D+S+PN+AK+MH+GH+RSTIIGD  +R LE+LGH+V+R N
Sbjct: 104  KLGISPVNPQT------IVIDYSAPNVAKQMHIGHIRSTIIGDAAARTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            H+GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV 
Sbjct: 158  HLGDWGTQFGMLIAYLE-KVQNENASDMALADLEEFYREAKKTYDEDEEFAIRARSYVVR 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W  + D++    Q+ Y+RLNVTLTE+   GES Y   +  +V  L++KG
Sbjct: 217  LQGGDEYCRTMWRKLVDITMSQNQETYNRLNVTLTEKDMMGESLYNDMLPDVVADLKQKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESDGATVVYLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHEVLHADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|423109075|ref|ZP_17096770.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
 gi|376383269|gb|EHS95997.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
          Length = 577

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/571 (40%), Positives = 323/571 (56%), Gaps = 47/571 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII----VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL   +  E +   +    +   QPP       V+VD+S+PN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPPAQT----VVVDYSAPNVAKEMHVGHLRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 745
            KK +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     
Sbjct: 197  KKHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTY 797
            GES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y
Sbjct: 257  GESLYNPMLPGIVADLKDKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLY 313

Query: 798  DTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
             T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++
Sbjct: 314  TTTDIACAKYRYENLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMM 372

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIK 917
            LG+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +K
Sbjct: 373  LGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVK 430

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
            YADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L  A    PV
Sbjct: 431  YADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESALVAA----PV 486

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1037
             +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E 
Sbjct: 487  VIIEDREAQLAARLLQFEETLTVVAREGTPHVMCSYLYDLAGLFSGFYEHCPILSAESE- 545

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                    RL LA  TAK +K   D L I T
Sbjct: 546  ---ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 192/335 (57%), Gaps = 36/335 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII----VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL   +  E +   +    +   QPP       V+VD+S+PN+AKEMHVGHLRSTI
Sbjct: 82  FINIFLDPAFLAENVSSALKSERLGVAQPPAQT----VVVDYSAPNVAKEMHVGHLRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+
Sbjct: 138 IGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 355
           KK +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     
Sbjct: 197 KKHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTY 407
           GES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y
Sbjct: 257 GESLYNPMLPGIVADLKDKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLY 313

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 314 TTTDIACAKYRYENLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 36/334 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII----VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL   +  E +   +    +   QPP       V+VD+S+PN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPPAQT----VVVDYSAPNVAKEMHVGHLRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 1372
            KK +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     
Sbjct: 197  KKHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTY 1424
            GES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y
Sbjct: 257  GESLYNPMLPGIVADLKDKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLY 313

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 314  TTTDIACAKYRYENLHADRVLYYIDSRQHQHLMQ 347


>gi|345299736|ref|YP_004829094.1| arginyl-tRNA synthetase [Enterobacter asburiae LF7a]
 gi|345093673|gb|AEN65309.1| Arginyl-tRNA synthetase [Enterobacter asburiae LF7a]
          Length = 577

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/567 (40%), Positives = 322/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  LA +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLAGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +    +   + +     T  K   +++D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLASNVDAALKSDRLGVTQPKAQTIVIDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+KK +
Sbjct: 142  SVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE+F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     GES 
Sbjct: 201  DEDEVFAERARSYVVKLQGGDAYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R A I+   L  AA    V +  
Sbjct: 435  SKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANIDESVLANAA----VQISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLSVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----A 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 189/331 (57%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  LA +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLAGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +    +   + +     T  K   +++D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLASNVDAALKSDRLGVTQPKAQTIVIDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+KK +
Sbjct: 142 SVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE+F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     GES 
Sbjct: 201 DEDEVFAERARSYVVKLQGGDAYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 188/330 (56%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  LA +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLAGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +    +   + +     T  K   +++D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLASNVDAALKSDRLGVTQPKAQTIVIDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH+V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+KK +
Sbjct: 142  SVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE+F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     GES 
Sbjct: 201  DEDEVFAERARSYVVKLQGGDAYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|433120415|ref|ZP_20306093.1| arginyl-tRNA synthetase [Escherichia coli KTE157]
 gi|431643510|gb|ELJ11202.1| arginyl-tRNA synthetase [Escherichia coli KTE157]
          Length = 577

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FG +Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGGYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 192/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FG +Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGGYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FG +Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGGYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|422022664|ref|ZP_16369171.1| arginyl-tRNA ligase [Providencia sneebia DSM 19967]
 gi|414095834|gb|EKT57494.1| arginyl-tRNA ligase [Providencia sneebia DSM 19967]
          Length = 576

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/605 (38%), Positives = 344/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+Q A    G    S A   +    +FG++Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGNYQANGVMGAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP  +A+ I S        +  L  + +KIE+A PGF+N+FL   +   Q +  +++ 
Sbjct: 53   -INPRQLAEQIVS--------HLDLEGIANKIEIAGPGFINIFLDPNWITAQAEQALISH 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    ++  +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E+LGH V+R NHVG
Sbjct: 104  NLGLSPV---QQETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +   +   +ADL+ FY+E+K+ +D DE F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENAEDMALADLETFYREAKQYYDSDEAFAERARGYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L  KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNDMLANIVADLRAKGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R +   AD ++Y  D 
Sbjct: 280  ESEGATVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHDVLHADRVLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTR+G TV+LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMTLEHHMFGMMLGKDGKPFKTRAGGTVRLSDLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   ++ KN   ++   EL+     V  G +KYADLS +R  DY+F +D ML   GNT
Sbjct: 399  ERAQVLIRTKN--PDMAEDELNNVANVVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+ASI + A I   DL     +  + L+ E+E ALA  L++  + +++V R
Sbjct: 457  APYMQYAYTRVASIFKKADITETDL-----TGSIQLQDEREIALATRLVQFEETILMVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   H +C YLYD++  FS FY++C  +  D + + ++    RL LA  T K +K   D 
Sbjct: 512  DGTPHVMCAYLYDLAGLFSSFYEHCPILSADDDAQRQS----RLKLALLTQKTLKAGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIET 572



 Score =  237 bits (605), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 32/369 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+Q A    G    S A   +    +FG++Q N  M   K       
Sbjct: 1   MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGNYQANGVMGAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP  +A+ I S        +  L  + +KIE+A PGF+N+FL   +   Q +  +++ 
Sbjct: 53  -INPRQLAEQIVS--------HLDLEGIANKIEIAGPGFINIFLDPNWITAQAEQALISH 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    ++  +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E+LGH V+R NHVG
Sbjct: 104 NLGLSPV---QQETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +   +   +ADL+ FY+E+K+ +D DE F +RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNENAEDMALADLETFYREAKQYYDSDEAFAERARGYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L  KGL  
Sbjct: 220 GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNDMLANIVADLRAKGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R +   AD ++Y  D 
Sbjct: 280 ESEGATVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHDVLHADRVLYYIDS 339

Query: 434 RSYHQVLQA 442
           R +  ++QA
Sbjct: 340 RQHQHLMQA 348



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/368 (37%), Positives = 209/368 (56%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+Q A    G    S A   +    +FG++Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGNYQANGVMGAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP  +A+ I S        +  L  + +KIE+A PGF+N+FL   +   Q +  +++ 
Sbjct: 53   -INPRQLAEQIVS--------HLDLEGIANKIEIAGPGFINIFLDPNWITAQAEQALISH 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    ++  +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E+LGH V+R NHVG
Sbjct: 104  NLGLSPV---QQETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +   +   +ADL+ FY+E+K+ +D DE F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENAEDMALADLETFYREAKQYYDSDEAFAERARGYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L  KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNDMLANIVADLRAKGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R +   AD ++Y  D 
Sbjct: 280  ESEGATVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHDVLHADRVLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|420304118|ref|ZP_14806125.1| arginine--tRNA ligase [Escherichia coli TW10119]
 gi|444974956|ref|ZP_21292138.1| arginine--tRNA ligase [Escherichia coli 99.1805]
 gi|390816804|gb|EIO83264.1| arginine--tRNA ligase [Escherichia coli TW10119]
 gi|444598260|gb|ELV73196.1| arginine--tRNA ligase [Escherichia coli 99.1805]
          Length = 577

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +K    ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKT--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTHDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|334124609|ref|ZP_08498609.1| arginine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
 gi|333388272|gb|EGK59452.1| arginine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
          Length = 577

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 233/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVAQPAAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I   D  V A +T V+
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANI---DESVLANAT-VT 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L  ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  LTEDREAQLAARLLQFEETLFVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAESEA- 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 547  ---VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  233 bits (593), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 187/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLASHVDAALKSDRLGVAQPAAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 186/333 (55%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVAQPAAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|157161347|ref|YP_001458665.1| arginyl-tRNA synthetase [Escherichia coli HS]
 gi|166987302|sp|A8A178.1|SYR_ECOHS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|157067027|gb|ABV06282.1| arginyl-tRNA synthetase [Escherichia coli HS]
          Length = 577

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++    L +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADGLEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|423120959|ref|ZP_17108643.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
 gi|376395589|gb|EHT08235.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
          Length = 577

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVNSALASERLGVARP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE+F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEVFAERARNYVVKLQGGDAYFLEMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEQLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R A ++ + L  A    PV 
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEVDEQALAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +   +E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  I  ++E  
Sbjct: 488  ITEAREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPIITAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA+ TA+ +K+  D L I T
Sbjct: 546  --AARNSRLKLAQLTARTLKQGLDTLGIET 573



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAENVNSALASERLGVARP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE+F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEVFAERARNYVVKLQGGDAYFLEMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVNSALASERLGVARP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE+F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEVFAERARNYVVKLQGGDAYFLEMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|269138777|ref|YP_003295478.1| arginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|387867456|ref|YP_005698925.1| arginyl-tRNA synthetase [Edwardsiella tarda FL6-60]
 gi|267984438|gb|ACY84267.1| arginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558769|gb|ADM41433.1| Arginyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 577

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 237/608 (38%), Positives = 343/608 (56%), Gaps = 49/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  +SD  T A+  A    G    S A        +FGD+Q N  MA  K       
Sbjct: 1    MNIQAIISDKVTQALVAA----GAPADSEALVRPSAKVQFGDYQANGIMAAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD----- 589
               P  +A+ + +        N +L  +  K+E+A PGF+N+FL   +   Q        
Sbjct: 53   -LPPRQLAEQVVA--------NLALDGIASKVEIAGPGFINIFLDAAWLAAQADAALADP 103

Query: 590  -IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVARVEPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+       T    +ADL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLEKVQGSSKTGDMALADLEAFYREAKKHYDEDAAFAERARGYVVK 217

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++ R  Q+ YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 218  LQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 766  LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   A+ I+Y 
Sbjct: 278  LATESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLGANRILYY 337

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KL++LLD
Sbjct: 338  IDSRQHQHLMQAWAIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLADLLD 396

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   +  KN   EL+  EL    + V  G +KYADLS NR  DY+F +D ML   
Sbjct: 397  EAIERAAKLIAAKN--PELSGDELKALVEVVGIGAVKYADLSKNRTTDYIFDWDNMLAFE 454

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ASI + AGI+   L+ A     ++L  ++E ALA  L++  + ++ 
Sbjct: 455  GNTAPYMQYAYTRVASIFKRAGIDENALQGA-----ITLTEDREKALATRLMQFEETILS 509

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLY+++  FS FY+ C  +  D E    +V   RL LA  TA+ +K  
Sbjct: 510  VAREGTPHVMCAYLYEVAGLFSSFYEACPILNADEE----SVCASRLKLAALTARTLKTG 565

Query: 1061 FDILNIRT 1068
             D L I+T
Sbjct: 566  LDTLGIKT 573



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/387 (37%), Positives = 212/387 (54%), Gaps = 37/387 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  +SD  T A+  A    G    S A        +FGD+Q N  MA  K       
Sbjct: 1   MNIQAIISDKVTQALVAA----GAPADSEALVRPSAKVQFGDYQANGIMAAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD----- 199
              P  +A+ + +        N +L  +  K+E+A PGF+N+FL   +   Q        
Sbjct: 53  -LPPRQLAEQVVA--------NLALDGIASKVEIAGPGFINIFLDAAWLAAQADAALADP 103

Query: 200 -IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 RLGVARVEPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+       T    +ADL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLEKVQGSSKTGDMALADLEAFYREAKKHYDEDAAFAERARGYVVK 217

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++ R  Q+ YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 218 LQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 376 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   A+ I+Y 
Sbjct: 278 LATESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLGANRILYY 337

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSS 457
            D R +  ++QA A   K   +  S S
Sbjct: 338 IDSRQHQHLMQAWAIVRKAGYVPDSVS 364



 Score =  233 bits (594), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/371 (38%), Positives = 206/371 (55%), Gaps = 37/371 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  +SD  T A+  A    G    S A        +FGD+Q N  MA  K       
Sbjct: 1    MNIQAIISDKVTQALVAA----GAPADSEALVRPSAKVQFGDYQANGIMAAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD----- 1216
               P  +A+ + +        N +L  +  K+E+A PGF+N+FL   +   Q        
Sbjct: 53   -LPPRQLAEQVVA--------NLALDGIASKVEIAGPGFINIFLDAAWLAAQADAALADP 103

Query: 1217 -IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVARVEPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+       T    +ADL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLEKVQGSSKTGDMALADLEAFYREAKKHYDEDAAFAERARGYVVK 217

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++ R  Q+ YDRLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 218  LQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 1393 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   A+ I+Y 
Sbjct: 278  LATESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLGANRILYY 337

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 338  IDSRQHQHLMQ 348


>gi|117922106|ref|YP_871298.1| arginyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166232843|sp|A0L1H3.1|SYR_SHESA RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|117614438|gb|ABK49892.1| arginyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 581

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/566 (40%), Positives = 330/566 (58%), Gaps = 41/566 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASNYVAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQAAISDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  N   ++ +GFG + GED 
Sbjct: 325  AAMRYRSSVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVR-NDMSLEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTR+G  VKL +LLDE   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRTGGVVKLVDLLDEANTRALELVRSKN--PDMDEATLAEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I + A     DL  A     + LEHE
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDIDLSQA----KIVLEHE 495

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            KE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D + +  + 
Sbjct: 496  KEKDLGNKLAQFGEILSRVVDKGQPHVLCGYLYELAGAFSSFYEACPVLAADNDEQKHS- 554

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RLLL++ TA  ++K  ++L I T
Sbjct: 555  ---RLLLSQLTANTLQKGLNLLGIET 577



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 189/322 (58%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASNYVAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFIDDSALANQLQAAISDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145 SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265 SAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSSVLKADRVLYFVDLR 346



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 189/322 (58%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASNYVAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQAAISDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSSVLKADRVLYFVDLR 346


>gi|417586757|ref|ZP_12237529.1| arginyl-tRNA synthetase [Escherichia coli STEC_C165-02]
 gi|345338260|gb|EGW70691.1| arginyl-tRNA synthetase [Escherichia coli STEC_C165-02]
          Length = 577

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L  V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLTAVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 546  --EVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 193/336 (57%), Gaps = 34/336 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|421845875|ref|ZP_16279027.1| arginyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
 gi|411773016|gb|EKS56599.1| arginyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
          Length = 577

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL  V+  + ++  + +   GV  PT   K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPVFLAQHVQQALASDRLGVTQPT---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L     +  V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESAL----ANAQVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  INEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA+ TAK +K   D L I T
Sbjct: 546  --EIRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/334 (40%), Positives = 193/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL  V+  + ++  + +   GV  PT   K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPVFLAQHVQQALASDRLGVTQPT---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 192/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL  V+  + ++  + +   GV  PT   K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPVFLAQHVQQALASDRLGVTQPT---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|114045966|ref|YP_736516.1| arginyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123131795|sp|Q0HZJ6.1|SYR_SHESR RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|113887408|gb|ABI41459.1| arginyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 581

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/566 (40%), Positives = 330/566 (58%), Gaps = 41/566 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQAAISDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  N   ++ +GFG + GED 
Sbjct: 325  AAMRYRSSVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVR-NDMSLEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTR+G  VKL +LLDE   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRTGGVVKLVDLLDEANTRALELVRSKN--PDMDEATLAEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I + A     DL  A     + LEHE
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDIDLSQA----KIVLEHE 495

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            KE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D + +  + 
Sbjct: 496  KEKDLGNKLAQFGEILSRVVDKGQPHVLCGYLYELAGAFSSFYEACPVLAADNDEQKHS- 554

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RLLL++ TA  ++K  ++L I T
Sbjct: 555  ---RLLLSQLTANTLQKGLNLLGIET 577



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 189/322 (58%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFIDDSALANQLQAAISDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145 SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265 SAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSSVLKADRVLYFVDLR 346



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 189/322 (58%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQAAISDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSSVLKADRVLYFVDLR 346


>gi|383189663|ref|YP_005199791.1| arginyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
 gi|371587921|gb|AEX51651.1| arginyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
          Length = 577

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 341/608 (56%), Gaps = 49/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQSLLSDKVSQALIAA----GASADSEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L+ + +KI++A PGF+N+FL   +    +   +   
Sbjct: 53   -MPPRQLAEKVVELL--------DLSGIANKIDIAGPGFINIFLDPAFVAAHVDSALNDE 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGH+RSTIIGD   R  E+LGH V+R N
Sbjct: 104  KLGITPVEPQT------IVIDYSAPNVAKEMHVGHIRSTIIGDAAVRTNEFLGHKVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       +ADL+ FY+ +KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KVQNENAADMNLADLEEFYRAAKKNYDEDEAFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D    + W  + DV+ +  Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCLQMWRKLVDVTMKQNQLTYNRLNVTLTEDDVMGESLYNSMLPGIVADLQAKG 276

Query: 766  LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 277  LAVDSEGAVVVYLDEYKNKEGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H       A+KAG + P+   ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIARKAGYV-PDSVALEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   +    EL +   AV  G IKYADLS +R  DY+F +D ML   
Sbjct: 396  EAIDRARKLITEKNPEMK-DAAELEKLVNAVGIGAIKYADLSKSRTTDYIFDWDNMLAFE 454

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ASI + A     D+ V + + PV L  E+E ALA  LL+  +VL +
Sbjct: 455  GNTAPYMQYAYTRVASIFKRA-----DIDVNSLTQPVVLSEEREAALATRLLQFEEVLTV 509

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  + E    T    RL LA  T + +K  
Sbjct: 510  VAREGTPHTMCAYLYDVAGLFSSFYEHCPILNAEDE----TSRNSRLKLALLTQRTLKTG 565

Query: 1061 FDILNIRT 1068
             D L I T
Sbjct: 566  LDTLGIET 573



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/372 (36%), Positives = 206/372 (55%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQSLLSDKVSQALIAA----GASADSEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L+ + +KI++A PGF+N+FL   +    +   +   
Sbjct: 53  -MPPRQLAEKVVELL--------DLSGIANKIDIAGPGFINIFLDPAFVAAHVDSALNDE 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGH+RSTIIGD   R  E+LGH V+R N
Sbjct: 104 KLGITPVEPQT------IVIDYSAPNVAKEMHVGHIRSTIIGDAAVRTNEFLGHKVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       +ADL+ FY+ +KK +DEDE F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KVQNENAADMNLADLEEFYRAAKKNYDEDEAFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D    + W  + DV+ +  Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCLQMWRKLVDVTMKQNQLTYNRLNVTLTEDDVMGESLYNSMLPGIVADLQAKG 276

Query: 376 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 277 LAVDSEGAVVVYLDEYKNKEGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/371 (36%), Positives = 205/371 (55%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQSLLSDKVSQALIAA----GASADSEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L+ + +KI++A PGF+N+FL   +    +   +   
Sbjct: 53   -MPPRQLAEKVVELL--------DLSGIANKIDIAGPGFINIFLDPAFVAAHVDSALNDE 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGH+RSTIIGD   R  E+LGH V+R N
Sbjct: 104  KLGITPVEPQT------IVIDYSAPNVAKEMHVGHIRSTIIGDAAVRTNEFLGHKVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       +ADL+ FY+ +KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KVQNENAADMNLADLEEFYRAAKKNYDEDEAFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D    + W  + DV+ +  Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCLQMWRKLVDVTMKQNQLTYNRLNVTLTEDDVMGESLYNSMLPGIVADLQAKG 276

Query: 1393 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 277  LAVDSEGAVVVYLDEYKNKEGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|113971826|ref|YP_735619.1| arginyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130050|sp|Q0HEF5.1|SYR_SHESM RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|113886510|gb|ABI40562.1| arginyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 581

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/566 (40%), Positives = 330/566 (58%), Gaps = 41/566 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQAAISDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  N   ++ +GFG + GED 
Sbjct: 325  AAMRYRSSVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVR-NDMSLEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTR+G  VKL +LLDE   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRTGGVVKLVDLLDEANTRALELVRSKN--PDMDEATLAEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I + A     DL  A     + LEHE
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDIDLSQA----KIVLEHE 495

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            KE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D + +  + 
Sbjct: 496  KEKDLGNKLAQFGEILSRVIDKGQPHVLCGYLYELAGAFSSFYEACPVLAADNDEQKHS- 554

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RLLL++ TA  ++K  ++L I T
Sbjct: 555  ---RLLLSQLTANTLQKGLNLLGIET 577



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 189/322 (58%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41  GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFIDDSALANQLQAAISDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145 SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265 SAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSSVLKADRVLYFVDLR 346



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 189/322 (58%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNLAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F+       Q++  I +   G++ PT      ++VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQAAISDEHLGIKLPTPQT---IVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VV LQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L+ +GLL   +G K+++ E     +  ++P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPVIIQKADGGYLYATTDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSSVLKADRVLYFVDLR 346


>gi|336314889|ref|ZP_08569803.1| arginyl-tRNA synthetase [Rheinheimera sp. A13L]
 gi|335880716|gb|EGM78601.1| arginyl-tRNA synthetase [Rheinheimera sp. A13L]
          Length = 579

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 235/606 (38%), Positives = 349/606 (57%), Gaps = 47/606 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++++ LS   T A  +A     D   +V  + +    +FGD+Q N AMA  K+ K    
Sbjct: 1    MNIKELLS-AKTQAAMLALGLPADTNTAVTISTKV---EFGDYQINGAMAAAKLLK---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP  +AQ        +L     LA++ +K+E+A PGF+NV L + +   Q+    V  
Sbjct: 53   -TNPRALAQ--------QLVQQLDLAELAEKVEIAGPGFINVTLRKDWLAAQL----VGA 99

Query: 595  VQPPTLNKKLR-----VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
             Q P L          V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH
Sbjct: 100  SQNPRLTLSANPAPQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRCLEFWGDKVIRQNH 159

Query: 650  VGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            +GDWGTQFGMLIAHL+DK    +  +   +ADL+ FY+E+KKRFD++  F  ++   VV 
Sbjct: 160  MGDWGTQFGMLIAHLEDKLAAGIDLEQVALADLEDFYREAKKRFDDEAGFADKSRDYVVK 219

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   +K W++  D S +   ++Y  L VTL     + ES Y   ++ +V  L+++G
Sbjct: 220  LQSGDAHCQKLWQLFIDTSIKHSDEVYKTLKVTLGHEHIKPESAYNAMLQPIVDSLKQQG 279

Query: 766  LLELDDGRKIMWGEDRG-----SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++ ++         P  + K+ GGF Y T+DLAA + R  +  AD IV  
Sbjct: 280  LAVESEGALVVFLQELADKEGNPSPFIVQKTGGGFLYATTDLAACQYRSFDLAADRIVIF 339

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
            TD  Q +HF+ +E  A+KAG+L  +    D   FG ++GED K FKTR+G TVKL+ELL+
Sbjct: 340  TDARQALHFKQVELVARKAGLLK-DHVAYDHCPFGTMMGEDGKPFKTRTGGTVKLAELLE 398

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   ++ K+  ++L+  E++E  + V  G +K+ADLS NR  DYVFS+D ML   
Sbjct: 399  EAVVRAQAVVEQKS--SDLSAEEMAEVARKVGIGAVKFADLSKNRTSDYVFSWDAMLSFE 456

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            G TA YL YAYTR++ I R AGI+   +       P+ L  E+E  LA  LLR+ + L  
Sbjct: 457  GATAPYLQYAYTRVSGILRRAGIDESFV------APLQLVEEQEKQLAVKLLRLEETLQA 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V +D   + LC YLY++S+ F  FY+ C  +++  E  +K     RL+L+   A+ +K+ 
Sbjct: 511  VMKDAVPNLLCNYLYELSSQFMSFYEACPILKEGIEPDLK---NSRLMLSILVARTLKQG 567

Query: 1061 FDILNI 1066
             D+L I
Sbjct: 568  LDLLGI 573



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/364 (37%), Positives = 203/364 (55%), Gaps = 35/364 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++++ LS   T A  +A     D   +V  + +    +FGD+Q N AMA  K+ K    
Sbjct: 1   MNIKELLS-AKTQAAMLALGLPADTNTAVTISTKV---EFGDYQINGAMAAAKLLK---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP  +AQ        +L     LA++ +K+E+A PGF+NV L + +   Q+    V  
Sbjct: 53  -TNPRALAQ--------QLVQQLDLAELAEKVEIAGPGFINVTLRKDWLAAQL----VGA 99

Query: 205 VQPPTLNKKLR-----VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
            Q P L          V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH
Sbjct: 100 SQNPRLTLSANPAPQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRCLEFWGDKVIRQNH 159

Query: 260 VGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           +GDWGTQFGMLIAHL+DK    +  +   +ADL+ FY+E+KKRFD++  F  ++   VV 
Sbjct: 160 MGDWGTQFGMLIAHLEDKLAAGIDLEQVALADLEDFYREAKKRFDDEAGFADKSRDYVVK 219

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   +K W++  D S +   ++Y  L VTL     + ES Y   ++ +V  L+++G
Sbjct: 220 LQSGDAHCQKLWQLFIDTSIKHSDEVYKTLKVTLGHEHIKPESAYNAMLQPIVDSLKQQG 279

Query: 376 LLELDDGRKIMWGEDRG-----SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++ ++         P  + K+ GGF Y T+DLAA + R  +  AD IV  
Sbjct: 280 LAVESEGALVVFLQELADKEGNPSPFIVQKTGGGFLYATTDLAACQYRSFDLAADRIVIF 339

Query: 431 TDHR 434
           TD R
Sbjct: 340 TDAR 343



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/364 (37%), Positives = 203/364 (55%), Gaps = 35/364 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++++ LS   T A  +A     D   +V  + +    +FGD+Q N AMA  K+ K    
Sbjct: 1    MNIKELLS-AKTQAAMLALGLPADTNTAVTISTKV---EFGDYQINGAMAAAKLLK---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP  +AQ        +L     LA++ +K+E+A PGF+NV L + +   Q+    V  
Sbjct: 53   -TNPRALAQ--------QLVQQLDLAELAEKVEIAGPGFINVTLRKDWLAAQL----VGA 99

Query: 1222 VQPPTLNKKLR-----VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
             Q P L          V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH
Sbjct: 100  SQNPRLTLSANPAPQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRCLEFWGDKVIRQNH 159

Query: 1277 VGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            +GDWGTQFGMLIAHL+DK    +  +   +ADL+ FY+E+KKRFD++  F  ++   VV 
Sbjct: 160  MGDWGTQFGMLIAHLEDKLAAGIDLEQVALADLEDFYREAKKRFDDEAGFADKSRDYVVK 219

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +K W++  D S +   ++Y  L VTL     + ES Y   ++ +V  L+++G
Sbjct: 220  LQSGDAHCQKLWQLFIDTSIKHSDEVYKTLKVTLGHEHIKPESAYNAMLQPIVDSLKQQG 279

Query: 1393 LLELDDGRKIMWGEDRG-----SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++ ++         P  + K+ GGF Y T+DLAA + R  +  AD IV  
Sbjct: 280  LAVESEGALVVFLQELADKEGNPSPFIVQKTGGGFLYATTDLAACQYRSFDLAADRIVIF 339

Query: 1448 TDHR 1451
            TD R
Sbjct: 340  TDAR 343


>gi|416241240|ref|ZP_11632621.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326572757|gb|EGE22743.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 575

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/564 (40%), Positives = 328/564 (58%), Gaps = 35/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----MNPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  +      ++        +   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNTAQNDTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+ +K  +
Sbjct: 142  VVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYRAAKHAY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDDTMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA
Sbjct: 261  YNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYTTTDIAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
               R     AD ++  TD  Q +H +      +KAG + P++  M+   FG++LG+D K 
Sbjct: 321  AAYRYHTLHADRVILFTDARQTLHAQQAWLITRKAGFV-PDEFVMEHFTFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TVKL++LLDE + R+   ++ KN   +L+  E     +AVA G +KY+DLS N
Sbjct: 380  FKTRTGGTVKLADLLDEAIERATTLIEQKN--PDLSAEEKRAVVEAVAIGAVKYSDLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            RN DY F +D ML   GNTA Y+ YAYTRI SI   AG++  D+        + +  +KE
Sbjct: 438  RNTDYAFDWDNMLSFEGNTAPYMQYAYTRIRSIFVRAGLDMADI-----GGEIVIHEDKE 492

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  +VL+LV +D   H LC+YL++++  FS FY+ C  +  D + K     T
Sbjct: 493  RALAVKLLQFEEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEACPILSSDDKTK-----T 547

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I+T
Sbjct: 548  SRLRLAALTAKTLKQGLQLLGIKT 571



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/328 (39%), Positives = 184/328 (56%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----MNPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  +      ++        +   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82  FINIFLKNEWISKHANQANISRTLGVNTAQNDTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+ +K  +
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYRAAKHAY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDDTMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA
Sbjct: 261 YNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYTTTDIAA 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
              R     AD ++  TD R      QA
Sbjct: 321 AAYRYHTLHADRVILFTDARQTLHAQQA 348



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/320 (39%), Positives = 182/320 (56%), Gaps = 22/320 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ++          + S+  + +K+E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----MNPREFAQTVLD--------HLSIDDIAEKLEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  +      ++        +   V+VD+SSPN+AKEMHVGHLRSTIIGD+
Sbjct: 82   FINIFLKNEWISKHANQANISRTLGVNTAQNDTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LG+ V+R NHVGDWGTQFGMLIA+L+ K  +   K   ++DL+AFY+ +K  +
Sbjct: 142  VVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLE-KVQNDDVKDLDLSDLEAFYRAAKHAY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            D DE F K++   VV LQ  D      W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQHTYDRLNVTLTRDDTMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA
Sbjct: 261  YNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAGDPMGVIIQKKDGGYLYTTTDIAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
               R     AD ++  TD R
Sbjct: 321  AAYRYHTLHADRVILFTDAR 340


>gi|421726858|ref|ZP_16166026.1| arginyl-tRNA ligase [Klebsiella oxytoca M5al]
 gi|410372398|gb|EKP27111.1| arginyl-tRNA ligase [Klebsiella oxytoca M5al]
          Length = 577

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ +GL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAQGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYENLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESTLAAA----PVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  ITEDREAQLAARLLQFEETLTVVAREGTPHVMCSYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  237 bits (605), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ +GL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAQGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYENLHADRVLYYIDSRQHQHLMQA 348



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLSGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ +GL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAQGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYENLHADRVLYYIDSRQHQHLMQ 347


>gi|381404236|ref|ZP_09928920.1| arginyl-tRNA synthetase [Pantoea sp. Sc1]
 gi|380737435|gb|EIB98498.1| arginyl-tRNA synthetase [Pantoea sp. Sc1]
          Length = 576

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/567 (38%), Positives = 333/567 (58%), Gaps = 40/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  +  ++ +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDHAWLAKHAREALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHVRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+AFY+E+K
Sbjct: 139  GDAAVRTLEFLGHRVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEAFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            + +DED  F +RA   VV LQ  DP  ++ W+ + D++    QKIYDR+NVTLT     G
Sbjct: 198  RTYDEDPEFAERARSYVVKLQGGDPYCREMWKKLVDITMSQNQKIYDRMNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNDMLPGIVADLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E  KAD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLKADRVLYYIDSRQHQHLVQAWTIVRKAGYV-PESVPLEHHAFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTRSG T+KLS+LLDE  +R+   +++KN   E++  E+    + V    +KYADL
Sbjct: 377  GRPFKTRSGGTIKLSDLLDEAYQRAYTLVREKN--PEMSEAEVKTLAEVVGISAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI+++ L        + +  
Sbjct: 435  SKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDADSL-----DAEIVISE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            E+E  LA  LL+  +++  V RD   H +C YLYD++  FS FY++C  +  ++E    +
Sbjct: 490  EREAQLATRLLQFEEIITQVARDGTPHVMCAYLYDLAGLFSGFYEHCPILTAESE----S 545

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA  TAK +K+  D L I T
Sbjct: 546  TRLSRLQLAALTAKTLKQGLDTLGIDT 572



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/401 (35%), Positives = 221/401 (55%), Gaps = 31/401 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  +  ++ +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDHAWLAKHAREALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHVRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+AFY+E+K
Sbjct: 139 GDAAVRTLEFLGHRVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEAFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           + +DED  F +RA   VV LQ  DP  ++ W+ + D++    QKIYDR+NVTLT     G
Sbjct: 198 RTYDEDPEFAERARSYVVKLQGGDPYCREMWKKLVDITMSQNQKIYDRMNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNDMLPGIVADLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---N 468
           +A  + R E  KAD ++Y  D R +  ++QA     K   +  S   +       +    
Sbjct: 318 IACAKYRYETLKADRVLYYIDSRQHQHLVQAWTIVRKAGYVPESVPLEHHAFGMMLGKDG 377

Query: 469 VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEK 509
            P + R      LSD+   A Q A+  + +K   ++    K
Sbjct: 378 RPFKTRSGGTIKLSDLLDEAYQRAYTLVREKNPEMSEAEVK 418



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 198/330 (60%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  +  ++ +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDHAWLAKHAREALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHVRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+AFY+E+K
Sbjct: 139  GDAAVRTLEFLGHRVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEAFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            + +DED  F +RA   VV LQ  DP  ++ W+ + D++    QKIYDR+NVTLT     G
Sbjct: 198  RTYDEDPEFAERARSYVVKLQGGDPYCREMWKKLVDITMSQNQKIYDRMNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNDMLPGIVADLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E  KAD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLKADRVLYYIDSRQHQHLVQ 347


>gi|417231824|ref|ZP_12033222.1| arginine--tRNA ligase [Escherichia coli 5.0959]
 gi|386204823|gb|EII09334.1| arginine--tRNA ligase [Escherichia coli 5.0959]
          Length = 577

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/567 (40%), Positives = 322/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 190/333 (57%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  232 bits (591), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 188/330 (56%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  + ++  + +        +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|260767651|ref|ZP_05876586.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617160|gb|EEX42344.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 577

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/602 (38%), Positives = 344/602 (57%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  ++D  + A++ A    G  T S A+  +    +FGD+Q N  M + K       
Sbjct: 1    MNIQALINDKVSQALEAA----GAPTGSPAAVRQSAKPQFGDYQANGVMGVAKQLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ +  V+         L  +  K E+A PGF+N+FLS  +  +Q    + + 
Sbjct: 53   -TNPREFAQKVIDVL--------DLDGIASKTEIAGPGFINIFLSEEFLAKQADAALADE 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                    +  ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+GDWG
Sbjct: 104  RLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+    +    S  ++DL+AFY+ESKK +DED  F +RA   VV LQ  D 
Sbjct: 164  TQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLYDEDAEFAERARNYVVKLQGGDA 223

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 771
                 W+ + DV+    Q+ YDRLNV+LT     GES Y   +  +V  L++KGL + DD
Sbjct: 224  FCLDMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESMYNDMLPGIVADLKEKGLAQEDD 283

Query: 772  GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G ++++ E   ++   PM ++  K DGGF Y T+D+A  + R E   AD ++Y  D  Q 
Sbjct: 284  GAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 343

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H        +KAG + P +  ++   FG++LG+D + FKTR+G TV+L++LLDE   R+
Sbjct: 344  QHLMQAWTIVRKAGYV-PEEVTLEHHAFGMMLGKDGRPFKTRAGGTVRLADLLDEAEERA 402

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               ++ KN   +L   E ++    VA   +KYADLS +R  DYVF +D ML   GNTA Y
Sbjct: 403  KALIESKN--PDLGADEKADIATTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPY 460

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTR+ASI   AG++ ++L     +  + +  EKE AL   LL+  + +  V+R+  
Sbjct: 461  MQYAYTRVASIFAKAGVSPDNL-----TGDIKITEEKEKALIAKLLQFEEAVQSVSREGQ 515

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YL++++  FS FY+ C  +  + E    +V   RL LA  TAK +K+   +L I
Sbjct: 516  PHILCSYLFELAGQFSSFYEACPILIAEDE----SVKQSRLKLAALTAKTIKQGLSLLGI 571

Query: 1067 RT 1068
            +T
Sbjct: 572  KT 573



 Score =  250 bits (639), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/452 (34%), Positives = 239/452 (52%), Gaps = 36/452 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  ++D  + A++ A    G  T S A+  +    +FGD+Q N  M + K       
Sbjct: 1   MNIQALINDKVSQALEAA----GAPTGSPAAVRQSAKPQFGDYQANGVMGVAKQLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ +  V+         L  +  K E+A PGF+N+FLS  +  +Q    + + 
Sbjct: 53  -TNPREFAQKVIDVL--------DLDGIASKTEIAGPGFINIFLSEEFLAKQADAALADE 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                   +  ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+GDWG
Sbjct: 104 RLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+    +    S  ++DL+AFY+ESKK +DED  F +RA   VV LQ  D 
Sbjct: 164 TQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLYDEDAEFAERARNYVVKLQGGDA 223

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 381
                W+ + DV+    Q+ YDRLNV+LT     GES Y   +  +V  L++KGL + DD
Sbjct: 224 FCLDMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESMYNDMLPGIVADLKEKGLAQEDD 283

Query: 382 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G ++++ E   ++   PM ++  K DGGF Y T+D+A  + R E   AD ++Y  D R +
Sbjct: 284 GAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 343

Query: 437 HQVLQAIAEEEKKQGISSSSSSQTKGTA---KKMNVPVRDRMSVRDYLSDVFTHA----- 488
             ++QA     K   +    + +         K   P + R      L+D+   A     
Sbjct: 344 QHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLGKDGRPFKTRAGGTVRLADLLDEAEERAK 403

Query: 489 --VQVAFPELG-DKTASVASTNEKYVHKFGDF 517
             ++   P+LG D+ A +A+T      K+ D 
Sbjct: 404 ALIESKNPDLGADEKADIATTVAMAAVKYADL 435



 Score =  249 bits (635), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/365 (38%), Positives = 209/365 (57%), Gaps = 25/365 (6%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  ++D  + A++ A    G  T S A+  +    +FGD+Q N  M + K       
Sbjct: 1    MNIQALINDKVSQALEAA----GAPTGSPAAVRQSAKPQFGDYQANGVMGVAKQLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ +  V+         L  +  K E+A PGF+N+FLS  +  +Q    + + 
Sbjct: 53   -TNPREFAQKVIDVL--------DLDGIASKTEIAGPGFINIFLSEEFLAKQADAALADE 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                    +  ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+GDWG
Sbjct: 104  RLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+    +    S  ++DL+AFY+ESKK +DED  F +RA   VV LQ  D 
Sbjct: 164  TQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLYDEDAEFAERARNYVVKLQGGDA 223

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 1398
                 W+ + DV+    Q+ YDRLNV+LT     GES Y   +  +V  L++KGL + DD
Sbjct: 224  FCLDMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESMYNDMLPGIVADLKEKGLAQEDD 283

Query: 1399 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G ++++ E   ++   PM ++  K DGGF Y T+D+A  + R E   AD ++Y  D R +
Sbjct: 284  GAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 343

Query: 1454 HQVLQ 1458
              ++Q
Sbjct: 344  QHLMQ 348


>gi|422014405|ref|ZP_16361017.1| arginyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
 gi|414101057|gb|EKT62662.1| arginyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
          Length = 576

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/605 (38%), Positives = 343/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+Q A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP  +A+ I S +         L  +  K+E+A PGF+N+FL   +   Q++  +V+ 
Sbjct: 53   -INPRQLAEHIVSHI--------ELEGIASKVEIAGPGFINIFLEPSWIIMQVEQALVSE 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGLSPV---KPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+E+K+ +D D  F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNESASDMALSDLEEFYREAKQHYDADADFAERARGYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYHRLNVTLTEDDVMGESLYNSMLAGIVADLKAKGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD ++Y  D 
Sbjct: 280  ESEGATVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRVLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTR+G TV+LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMTLEHHMFGMMLGKDGKPFKTRAGGTVRLSDLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   ++ KN   E++  EL+     V  G +KYADLS +R  DY+F +D ML   GNT
Sbjct: 399  ERAKVLIRTKN--PEMSEDELNNVANVVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+ASI + A +   DL     + P+ L+  +E ALA  L++  + +++V R
Sbjct: 457  APYMQYAYTRVASIFKKANVTQADL-----TLPLVLQDPREIALATRLMQFEETILMVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   H +C YLYD++  FS FY++C  +  + E + ++    RL LA  T K +K   D 
Sbjct: 512  DGTPHVMCAYLYDLAGLFSSFYEHCPILSAEDEEQRQS----RLKLALLTQKTLKIGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIET 572



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 208/369 (56%), Gaps = 32/369 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+Q A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP  +A+ I S +         L  +  K+E+A PGF+N+FL   +   Q++  +V+ 
Sbjct: 53  -INPRQLAEHIVSHI--------ELEGIASKVEIAGPGFINIFLEPSWIIMQVEQALVSE 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104 RLGLSPV---KPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+ FY+E+K+ +D D  F +RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNESASDMALSDLEEFYREAKQHYDADADFAERARGYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRKMWRKLVDITMQQNQETYHRLNVTLTEDDVMGESLYNSMLAGIVADLKAKGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD ++Y  D 
Sbjct: 280 ESEGATVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRVLYYIDS 339

Query: 434 RSYHQVLQA 442
           R +  ++QA
Sbjct: 340 RQHQHLMQA 348



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/368 (37%), Positives = 207/368 (56%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+Q A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMQAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP  +A+ I S +         L  +  K+E+A PGF+N+FL   +   Q++  +V+ 
Sbjct: 53   -INPRQLAEHIVSHI--------ELEGIASKVEIAGPGFINIFLEPSWIIMQVEQALVSE 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGLSPV---KPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+E+K+ +D D  F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNESASDMALSDLEEFYREAKQHYDADADFAERARGYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYHRLNVTLTEDDVMGESLYNSMLAGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD ++Y  D 
Sbjct: 280  ESEGATVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRVLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|270262239|ref|ZP_06190511.1| arginyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|421783973|ref|ZP_16220416.1| arginine--tRNA ligase [Serratia plymuthica A30]
 gi|270044115|gb|EFA17207.1| arginyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|407753836|gb|EKF63976.1| arginine--tRNA ligase [Serratia plymuthica A30]
          Length = 576

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/606 (37%), Positives = 343/606 (56%), Gaps = 46/606 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +Q+ D ++N 
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDIASKVEIAGPGFINIFLNGEWVAQQV-DQVLNA 102

Query: 594  ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
               G+ P    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHV
Sbjct: 103  PKLGIAPV---KQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHV 159

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAEFAERARAYVVKLQ 218

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 767
              D    K W  + D++    Q  Y+RLNVTLTE    GES Y   + ++V  L+ KGL 
Sbjct: 219  GGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPEIVADLKAKGLA 278

Query: 768  ELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
               +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D
Sbjct: 279  VESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYID 338

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G TV+LS+LLDE 
Sbjct: 339  SRQHQHLMQAWTIVRKAGYI-PDSLSLEHHMFGMMLGKDGKPFKTRAGGTVRLSDLLDEA 397

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            + R+   + +KN   ++   E+      V  G +KYADLS +R  DY+F +D ML   GN
Sbjct: 398  IDRAGKLIAEKN--PDMPAEEMQHLANVVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGN 455

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA Y+ YAYTR+AS+ + AG++   L     + P+ +  E+E ALA  LL+  +V+  V 
Sbjct: 456  TAPYMQYAYTRVASVFKRAGLDENSL-----TLPLVMTEEREIALATRLLQFEEVITTVA 510

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
            RD   H +C YLYD++  FS FY++C  +  D+E         RL LA  TA+ +K   D
Sbjct: 511  RDGTPHVMCTYLYDLAGLFSGFYEHCQILNADSE----EARQSRLKLALLTARTLKTGLD 566

Query: 1063 ILNIRT 1068
             L I T
Sbjct: 567  TLGIDT 572



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/370 (37%), Positives = 210/370 (56%), Gaps = 34/370 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +Q+ D ++N 
Sbjct: 53  -MPPRQLAEKVVQLL--------DLGDIASKVEIAGPGFINIFLNGEWVAQQV-DQVLNA 102

Query: 204 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
              G+ P    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHV
Sbjct: 103 PKLGIAPV---KQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHV 159

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV LQ
Sbjct: 160 GDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAEFAERARAYVVKLQ 218

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 377
             D    K W  + D++    Q  Y+RLNVTLTE    GES Y   + ++V  L+ KGL 
Sbjct: 219 GGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPEIVADLKAKGLA 278

Query: 378 ELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
              +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D
Sbjct: 279 VESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYID 338

Query: 433 HRSYHQVLQA 442
            R +  ++QA
Sbjct: 339 SRQHQHLMQA 348



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/369 (36%), Positives = 209/369 (56%), Gaps = 34/369 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +Q+ D ++N 
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDIASKVEIAGPGFINIFLNGEWVAQQV-DQVLNA 102

Query: 1221 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
               G+ P    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHV
Sbjct: 103  PKLGIAPV---KQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHV 159

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAEFAERARAYVVKLQ 218

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 1394
              D    K W  + D++    Q  Y+RLNVTLTE    GES Y   + ++V  L+ KGL 
Sbjct: 219  GGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPEIVADLKAKGLA 278

Query: 1395 ELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
               +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D
Sbjct: 279  VESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYID 338

Query: 1450 HRSYHQVLQ 1458
             R +  ++Q
Sbjct: 339  SRQHQHLMQ 347


>gi|453065283|gb|EMF06246.1| arginyl-tRNA ligase [Serratia marcescens VGH107]
 gi|453066345|gb|EMF07292.1| arginyl-tRNA ligase [Serratia marcescens VGH107]
          Length = 576

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 234/608 (38%), Positives = 341/608 (56%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+ +A     D  A V  + +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQAL-IAAGAPADCEAQVRPSAKA---QFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  V  K+E+A PGF+N+FL+  +   Q   ++   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDVAGKVEIAGPGFINIFLNSDWVARQADQVLNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R N
Sbjct: 104  KLGIAPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAEFAERARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   A+ ++Y 
Sbjct: 277  LAVESEGATVVFLDEYQNKDGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLGANRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   +  KN   ++   E+    + V  G +KYADLS +R  DYVF +D ML   
Sbjct: 396  EAIERAEQLIAGKN--PDMPQDEMKTVARVVGIGAVKYADLSKSRTTDYVFDWDNMLAFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+AS+ + AGI+   L     S P++L  E+E ALA  LL+  +VL  
Sbjct: 454  GNTAPYMQYAYTRVASVFKRAGIDESSL-----SLPLTLTEEREIALATRLLQFEEVLTT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  D+E         RL LA  T+K +K  
Sbjct: 509  VAREGTPHVMCSYLYDLAGLFSGFYEHCQILNADSE----ETRQSRLKLALLTSKTLKTG 564

Query: 1061 FDILNIRT 1068
             D L I T
Sbjct: 565  LDTLGIET 572



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/372 (36%), Positives = 208/372 (55%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+ +A     D  A V  + +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQVLLSDKVSQAL-IAAGAPADCEAQVRPSAKA---QFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  V  K+E+A PGF+N+FL+  +   Q   ++   
Sbjct: 53  -MPPRQLAEKVVQLL--------DLGDVAGKVEIAGPGFINIFLNSDWVARQADQVLNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R N
Sbjct: 104 KLGIAPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAEFAERARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   A+ ++Y 
Sbjct: 277 LAVESEGATVVFLDEYQNKDGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLGANRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/371 (36%), Positives = 207/371 (55%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+ +A     D  A V  + +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQAL-IAAGAPADCEAQVRPSAKA---QFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  V  K+E+A PGF+N+FL+  +   Q   ++   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDVAGKVEIAGPGFINIFLNSDWVARQADQVLNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R N
Sbjct: 104  KLGIAPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAEFAERARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   A+ ++Y 
Sbjct: 277  LAVESEGATVVFLDEYQNKDGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLGANRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|24375609|ref|NP_719652.1| arginyl-tRNA synthetase ArgS [Shewanella oneidensis MR-1]
 gi|38372524|sp|Q8E9Y7.1|SYR_SHEON RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|24350506|gb|AAN57096.1| arginyl-tRNA synthetase ArgS [Shewanella oneidensis MR-1]
          Length = 581

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 232/566 (40%), Positives = 330/566 (58%), Gaps = 41/566 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNVAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F+       Q++  I +   G++ P       V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQAAIGDEHLGIKLPAPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 690
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQLELSDLETFYRAAKL 204

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE   F  RA Q VVALQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVALQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 802
            S Y   +EQ+V  L  KGLL   +G K+++ E+  +     +P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVNDLAAKGLLTESNGAKVVFQEEFRTKEGEPLPVIIQKADGGYLYATTDL 324

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AA+R R    KAD ++Y  DL Q +HF+ +   AK A  +  + + ++ +GFG + GED 
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVREDMS-LEHLGFGTMNGEDG 383

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTR+G  VKL +LLDE   R+L+ ++ KN   ++    L+E  + V    +KYADLS
Sbjct: 384  RPFKTRTGGVVKLVDLLDEANTRALELVRSKN--PDMDEATLAEIARVVGISAVKYADLS 441

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DY+FSF++ML   GNTA YLLYAYTR+A I + A     DL  A     + LEHE
Sbjct: 442  KNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDVDLSQA----KIVLEHE 495

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            KE  L   L +  ++L  V      H LC YLY+++ AFS FY+ C  +  D + +  + 
Sbjct: 496  KEKDLGNKLAQFGEILSRVVDKGQPHVLCGYLYELAGAFSSFYEACPVLAADNDEQKHS- 554

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RLLL++ TA  ++K  ++L I T
Sbjct: 555  ---RLLLSQLTASTLQKGLNLLGIET 577



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 188/322 (58%), Gaps = 28/322 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41  GDLATNVAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F+       Q++  I +   G++ P       V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFIDDSALANQLQAAIGDEHLGIKLPAPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 300
           ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145 SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQLELSDLETFYRAAKL 204

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE   F  RA Q VVALQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205 RFDESAEFATRARQLVVALQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 412
           S Y   +EQ+V  L  KGLL   +G K+++ E+  +     +P+ I K+DGG+ Y T+DL
Sbjct: 265 SAYNADLEQVVNDLAAKGLLTESNGAKVVFQEEFRTKEGEPLPVIIQKADGGYLYATTDL 324

Query: 413 AAIRQRIEEEKADWIVYVTDHR 434
           AA+R R    KAD ++Y  D R
Sbjct: 325 AAMRYRSNVLKADRVLYFVDLR 346



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 188/322 (58%), Gaps = 28/322 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K        KNP ++AQ I          N   +  + K+E+A PGF+
Sbjct: 41   GDLATNVAMMLTK-----AAGKNPRELAQLIID--------NLPASAYVAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F+       Q++  I +   G++ P       V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFIDDSALANQLQAAIGDEHLGIKLPAPQT---VVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKK 1317
            ++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K 
Sbjct: 145  SVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQLELSDLETFYRAAKL 204

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE   F  RA Q VVALQ  D    K W    D+S     ++Y+RL V+LT     GE
Sbjct: 205  RFDESAEFATRARQLVVALQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGE 264

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 1429
            S Y   +EQ+V  L  KGLL   +G K+++ E+  +     +P+ I K+DGG+ Y T+DL
Sbjct: 265  SAYNADLEQVVNDLAAKGLLTESNGAKVVFQEEFRTKEGEPLPVIIQKADGGYLYATTDL 324

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            AA+R R    KAD ++Y  D R
Sbjct: 325  AAMRYRSNVLKADRVLYFVDLR 346


>gi|410634728|ref|ZP_11345361.1| arginyl-tRNA synthetase [Glaciecola arctica BSs20135]
 gi|410145771|dbj|GAC22228.1| arginyl-tRNA synthetase [Glaciecola arctica BSs20135]
          Length = 578

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/563 (39%), Positives = 325/563 (57%), Gaps = 32/563 (5%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FG +Q N AMAL K+ K     +NP DIAQ I  VV         L  + +K+EVA PGF
Sbjct: 36   FGHYQFNGAMALSKVLK-----QNPRDIAQKIVDVV--------ELDDIAEKLEVAGPGF 82

Query: 574  VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            +N+ L   +  +Q++    +        ++  V+VD+S+PN+AKEMHVGHLRSTIIGD +
Sbjct: 83   INIHLKPQWLAQQLQAANADSRLGIEAEQQQTVVVDYSAPNLAKEMHVGHLRSTIIGDAV 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            ++ LE+LGH V+R NH+GDWGTQFGMLI HL DK          ++DL+ FY+ +K RFD
Sbjct: 143  AKTLEFLGHKVIRQNHMGDWGTQFGMLITHLNDKLAADGVAETALSDLEDFYRAAKVRFD 202

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
             ++ F  RA + VV LQ  DP+    W+    +S    + +YD+LNV+L      GES Y
Sbjct: 203  NEDGFADRARENVVKLQSGDPECLSLWKTFVTISIAHSEHVYDKLNVSLKRSDIMGESAY 262

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAI 805
             K +   V  L+  G++    G ++ +     +  G+    IV KS GG+ Y T+D AAI
Sbjct: 263  NKDLAATVAELKSSGIVVESQGAQVAFLQEMADKEGNPAAYIVQKSGGGYLYATTDQAAI 322

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R     AD  +  TD+ Q +HF+  E  A+KAG + P +T  +   FG++LG D K F
Sbjct: 323  RYRNGVLGADRTLIFTDVRQALHFKQTEIVARKAGFIKPTQT-YEHCPFGMMLGSDGKPF 381

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTR+G TVKL+ELLDE + R+  ++    R ++L+  E       V  G +KYADLS NR
Sbjct: 382  KTRTGGTVKLAELLDEAIERA--EVLINQRESDLSAQERKIIADKVGIGAVKYADLSKNR 439

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY+F++D ML   GNTA YL YAY R+ SI R A ++  +L+       + LE  +E 
Sbjct: 440  TTDYIFNWDSMLSFEGNTAPYLQYAYARVQSIFRKAHVDDVNLQ-----ADIQLEEVQEQ 494

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  L++  + +  V+ +   H LC Y+Y++++ F  FY+ C  +++  E + K     
Sbjct: 495  LLAVKLMQYVEAIKQVSSEATPHVLCAYIYELASLFMSFYEACPILKEGIEEQTK---NS 551

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RL+LA+ TAK ++   D+L I T
Sbjct: 552  RLMLAQLTAKTLQSGLDLLGIET 574



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 182/319 (57%), Gaps = 21/319 (6%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FG +Q N AMAL K+ K     +NP DIAQ I  VV         L  + +K+EVA PGF
Sbjct: 36  FGHYQFNGAMALSKVLK-----QNPRDIAQKIVDVV--------ELDDIAEKLEVAGPGF 82

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ L   +  +Q++    +        ++  V+VD+S+PN+AKEMHVGHLRSTIIGD +
Sbjct: 83  INIHLKPQWLAQQLQAANADSRLGIEAEQQQTVVVDYSAPNLAKEMHVGHLRSTIIGDAV 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           ++ LE+LGH V+R NH+GDWGTQFGMLI HL DK          ++DL+ FY+ +K RFD
Sbjct: 143 AKTLEFLGHKVIRQNHMGDWGTQFGMLITHLNDKLAADGVAETALSDLEDFYRAAKVRFD 202

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
            ++ F  RA + VV LQ  DP+    W+    +S    + +YD+LNV+L      GES Y
Sbjct: 203 NEDGFADRARENVVKLQSGDPECLSLWKTFVTISIAHSEHVYDKLNVSLKRSDIMGESAY 262

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAI 415
            K +   V  L+  G++    G ++ +     +  G+    IV KS GG+ Y T+D AAI
Sbjct: 263 NKDLAATVAELKSSGIVVESQGAQVAFLQEMADKEGNPAAYIVQKSGGGYLYATTDQAAI 322

Query: 416 RQRIEEEKADWIVYVTDHR 434
           R R     AD  +  TD R
Sbjct: 323 RYRNGVLGADRTLIFTDVR 341



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 182/319 (57%), Gaps = 21/319 (6%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FG +Q N AMAL K+ K     +NP DIAQ I  VV         L  + +K+EVA PGF
Sbjct: 36   FGHYQFNGAMALSKVLK-----QNPRDIAQKIVDVV--------ELDDIAEKLEVAGPGF 82

Query: 1201 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            +N+ L   +  +Q++    +        ++  V+VD+S+PN+AKEMHVGHLRSTIIGD +
Sbjct: 83   INIHLKPQWLAQQLQAANADSRLGIEAEQQQTVVVDYSAPNLAKEMHVGHLRSTIIGDAV 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            ++ LE+LGH V+R NH+GDWGTQFGMLI HL DK          ++DL+ FY+ +K RFD
Sbjct: 143  AKTLEFLGHKVIRQNHMGDWGTQFGMLITHLNDKLAADGVAETALSDLEDFYRAAKVRFD 202

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
             ++ F  RA + VV LQ  DP+    W+    +S    + +YD+LNV+L      GES Y
Sbjct: 203  NEDGFADRARENVVKLQSGDPECLSLWKTFVTISIAHSEHVYDKLNVSLKRSDIMGESAY 262

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAI 1432
             K +   V  L+  G++    G ++ +     +  G+    IV KS GG+ Y T+D AAI
Sbjct: 263  NKDLAATVAELKSSGIVVESQGAQVAFLQEMADKEGNPAAYIVQKSGGGYLYATTDQAAI 322

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R     AD  +  TD R
Sbjct: 323  RYRNGVLGADRTLIFTDVR 341


>gi|91794705|ref|YP_564356.1| arginyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060581|sp|Q12IU3.1|SYR_SHEDO RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|91716707|gb|ABE56633.1| arginyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 581

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 232/563 (41%), Positives = 329/563 (58%), Gaps = 35/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K+       KNP ++AQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQ----LIIDNLPPSSHVAKV----EIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F+       Q++  + +     TL +   ++VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDNALATQLEQALNDEHFGITLPEPQTIVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 693
            R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148  RALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQLELSDLETFYRAAKLRFD 207

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E   F  RA Q VVALQ  D    K W+   D+S      +Y+RL V+LT     GES Y
Sbjct: 208  ESTDFATRARQLVVALQSGDEYCNKLWQEFNDISLSHCHDVYERLGVSLTRADVHGESAY 267

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 805
               +EQ+V  L+ KGLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDLAA+
Sbjct: 268  NADLEQVVKDLDAKGLLSESNGAKVVFQEAFRTKEGEPLPVIIQKADGGYLYATSDLAAM 327

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R +  KAD  +Y  DL Q +HF+ +   AK A  +  +  +++  GFG + GED + F
Sbjct: 328  RYRSKVLKADRALYFVDLRQALHFQQVFSLAKLAKFVRKD-MQLEHNGFGTMNGEDGRPF 386

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSG  VKL +LLDE   R+L+ ++ KN   ++    L+E  + V    +KYADLS NR
Sbjct: 387  KTRSGGVVKLVDLLDEANNRALELVRSKN--PDMDEATLTEIARVVGISSVKYADLSKNR 444

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY+FSF++ML   GNTA YLLYAYTR+A I + A    ED+ +      + LEH+KE 
Sbjct: 445  TSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA----EDIDLT--DAKIVLEHDKEK 498

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  L +  + L  +T     + LC YLY+++ AFS FY+ C  +  D   +       
Sbjct: 499  ELATKLAQFGETLYKMTDKAQPNMLCNYLYELAGAFSSFYEACPVLAADTPAQ----QGS 554

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RLLLA+ TA  + K   +L I T
Sbjct: 555  RLLLAKLTANTLNKGLSLLGIET 577



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 190/319 (59%), Gaps = 22/319 (6%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K+       KNP ++AQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41   GDLATNLAMMLTKV-----AGKNPRELAQ----LIIDNLPPSSHVAKV----EIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F+       Q++  + +     TL +   ++VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDNALATQLEQALNDEHFGITLPEPQTIVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 1320
            R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148  RALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQLELSDLETFYRAAKLRFD 207

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E   F  RA Q VVALQ  D    K W+   D+S      +Y+RL V+LT     GES Y
Sbjct: 208  ESTDFATRARQLVVALQSGDEYCNKLWQEFNDISLSHCHDVYERLGVSLTRADVHGESAY 267

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 1432
               +EQ+V  L+ KGLL   +G K+++ E     +   +P+ I K+DGG+ Y TSDLAA+
Sbjct: 268  NADLEQVVKDLDAKGLLSESNGAKVVFQEAFRTKEGEPLPVIIQKADGGYLYATSDLAAM 327

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R +  KAD  +Y  D R
Sbjct: 328  RYRSKVLKADRALYFVDLR 346



 Score =  231 bits (590), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 194/330 (58%), Gaps = 27/330 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNP-SLAKVI---------- 173
            DFQ        +I  D+ + K   D+A ++A ++T     NP  LA++I          
Sbjct: 24  ADFQA-------RIQVDRTKDKTHGDLATNLAMMLTKVAGKNPRELAQLIIDNLPPSSHV 76

Query: 174 DKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGH 233
            K+E+A PGF+N F+       Q++  + +     TL +   ++VD+SSPN+AKEMHVGH
Sbjct: 77  AKVEIAGPGFINFFIDDNALATQLEQALNDEHFGITLPEPQTIVVDYSSPNLAKEMHVGH 136

Query: 234 LRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQ 292
           LRSTIIGD++ R LE+LGH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+
Sbjct: 137 LRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQLELSDLE 196

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FY+ +K RFDE   F  RA Q VVALQ  D    K W+   D+S      +Y+RL V+L
Sbjct: 197 TFYRAAKLRFDESTDFATRARQLVVALQSGDEYCNKLWQEFNDISLSHCHDVYERLGVSL 256

Query: 353 TE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGG 404
           T     GES Y   +EQ+V  L+ KGLL   +G K+++ E     +   +P+ I K+DGG
Sbjct: 257 TRADVHGESAYNADLEQVVKDLDAKGLLSESNGAKVVFQEAFRTKEGEPLPVIIQKADGG 316

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
           + Y TSDLAA+R R +  KAD  +Y  D R
Sbjct: 317 YLYATSDLAAMRYRSKVLKADRALYFVDLR 346


>gi|322832419|ref|YP_004212446.1| arginyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|384257532|ref|YP_005401466.1| arginyl-tRNA synthetase [Rahnella aquatilis HX2]
 gi|321167620|gb|ADW73319.1| arginyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|380753508|gb|AFE57899.1| arginyl-tRNA synthetase [Rahnella aquatilis HX2]
          Length = 577

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 342/608 (56%), Gaps = 49/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQSLLSEKVSQALIAA----GASADSEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L+ + +K+E+A PGF+N+FL   +    +   +   
Sbjct: 53   -MPPRQLAEKVVELL--------DLSGIANKVEIAGPGFINIFLDPAFVAAHVDSALNDE 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGH+RSTIIGD   R  E+LGH V+R N
Sbjct: 104  KLGITPVEPQT------IVIDYSAPNVAKEMHVGHIRSTIIGDAAVRTNEFLGHKVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       +ADL+ FY+ +KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KVQNENAGDMNLADLEEFYRAAKKNYDEDEAFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D    + W  + DV+ +  Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCLQMWRKLVDVTMKQNQLTYNRLNVTLTEDDVMGESLYNSMLPGIVSDLQAKG 276

Query: 766  LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 277  LAVDSEGAVVVYLDEYKNKEGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H       A+KAG + P+   ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIARKAGYV-PDSVALEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   + T  EL +   AV  G IKYADLS +R  DY+F +D ML   
Sbjct: 396  EAIDRARKLITEKNPEMKDT-GELEKLVNAVGIGAIKYADLSKSRTTDYIFDWDNMLAFE 454

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ASI + A     D+ V + + PV L  E+E ALA  LL+  +VL +
Sbjct: 455  GNTAPYMQYAYTRVASIFKRA-----DIDVNSLTQPVVLSEEREAALATRLLQFEEVLTV 509

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  + E    T    RL LA  T + +K  
Sbjct: 510  VAREGTPHTMCAYLYDVAGLFSSFYEHCPILNAEDE----TSRNSRLKLALLTQRTLKTG 565

Query: 1061 FDILNIRT 1068
             D L I T
Sbjct: 566  LDTLGIET 573



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 206/372 (55%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQSLLSEKVSQALIAA----GASADSEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L+ + +K+E+A PGF+N+FL   +    +   +   
Sbjct: 53  -MPPRQLAEKVVELL--------DLSGIANKVEIAGPGFINIFLDPAFVAAHVDSALNDE 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGH+RSTIIGD   R  E+LGH V+R N
Sbjct: 104 KLGITPVEPQT------IVIDYSAPNVAKEMHVGHIRSTIIGDAAVRTNEFLGHKVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       +ADL+ FY+ +KK +DEDE F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KVQNENAGDMNLADLEEFYRAAKKNYDEDEAFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D    + W  + DV+ +  Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCLQMWRKLVDVTMKQNQLTYNRLNVTLTEDDVMGESLYNSMLPGIVSDLQAKG 276

Query: 376 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 277 LAVDSEGAVVVYLDEYKNKEGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  229 bits (584), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 133/371 (35%), Positives = 205/371 (55%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQSLLSEKVSQALIAA----GASADSEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L+ + +K+E+A PGF+N+FL   +    +   +   
Sbjct: 53   -MPPRQLAEKVVELL--------DLSGIANKVEIAGPGFINIFLDPAFVAAHVDSALNDE 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGH+RSTIIGD   R  E+LGH V+R N
Sbjct: 104  KLGITPVEPQT------IVIDYSAPNVAKEMHVGHIRSTIIGDAAVRTNEFLGHKVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       +ADL+ FY+ +KK +DEDE F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KVQNENAGDMNLADLEEFYRAAKKNYDEDEAFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D    + W  + DV+ +  Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCLQMWRKLVDVTMKQNQLTYNRLNVTLTEDDVMGESLYNSMLPGIVSDLQAKG 276

Query: 1393 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y 
Sbjct: 277  LAVDSEGAVVVYLDEYKNKEGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|237731911|ref|ZP_04562392.1| arginyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226907450|gb|EEH93368.1| arginyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 577

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL  V+  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPVFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L     +  V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESAL----ANAQVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  ISEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA+ TAK +K   D L I T
Sbjct: 546  --EIRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/334 (40%), Positives = 193/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL  V+  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPVFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 192/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL  V+  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPVFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|386822560|ref|ZP_10109766.1| arginyl-tRNA synthetase [Serratia plymuthica PRI-2C]
 gi|386380549|gb|EIJ21280.1| arginyl-tRNA synthetase [Serratia plymuthica PRI-2C]
          Length = 576

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/605 (37%), Positives = 341/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +Q+  ++   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDIASKVEIAGPGFINIFLNGEWVAQQVDQVLSAP 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHVG
Sbjct: 104  KLGIAPV---KQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAGFAERARAYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVSDLKAKGLAV 279

Query: 769  LDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D 
Sbjct: 280  ESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G TV+LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PDSLSLEHHMFGMMLGKDGKPFKTRAGGTVRLSDLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   + +KN   ++   E+      V  G +KYADLS +R  DY+F +D ML   GNT
Sbjct: 399  DRAGKLIAEKN--PDMPAEEMQHLANVVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+AS+ + AG++  +L     + P+ +  E+E ALA  LL+  +V+  V R
Sbjct: 457  APYMQYAYTRVASVFKRAGLDESNL-----TLPLVMSEEREIALATRLLQFEEVITTVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   H +C YLYD++  FS FY++C  +  D+E         RL LA  TA+ +K   D 
Sbjct: 512  DGTPHVMCTYLYDLAGLFSGFYEHCQILNADSE----EARQSRLKLALLTARTLKTGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIDT 572



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/369 (36%), Positives = 207/369 (56%), Gaps = 32/369 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +Q+  ++   
Sbjct: 53  -MPPRQLAEKVVQLL--------DLGDIASKVEIAGPGFINIFLNGEWVAQQVDQVLSAP 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHVG
Sbjct: 104 KLGIAPV---KQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAGFAERARAYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVSDLKAKGLAV 279

Query: 379 LDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D 
Sbjct: 280 ESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDS 339

Query: 434 RSYHQVLQA 442
           R +  ++QA
Sbjct: 340 RQHQHLMQA 348



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 134/368 (36%), Positives = 206/368 (55%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +Q+  ++   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDIASKVEIAGPGFINIFLNGEWVAQQVDQVLSAP 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHVG
Sbjct: 104  KLGIAPV---KQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAGFAERARAYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVSDLKAKGLAV 279

Query: 1396 LDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D 
Sbjct: 280  ESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|448242569|ref|YP_007406622.1| arginyl-tRNA synthetase [Serratia marcescens WW4]
 gi|445212933|gb|AGE18603.1| arginyl-tRNA synthetase [Serratia marcescens WW4]
          Length = 576

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 234/608 (38%), Positives = 341/608 (56%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+ +A     D  A V  + +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQAL-IAAGAPADCEAQVRPSAKA---QFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  V  K+E+A PGF+N+FL+  +   Q   ++   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDVAGKVEIAGPGFINIFLNSDWVARQADQVLNAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R N
Sbjct: 104  KLGIAPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAEFAERARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   A+ ++Y 
Sbjct: 277  LAVESEGATVVFLDEYQNKDGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLGANRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TVKLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   +  KN   ++   E+    + V  G +KYADLS +R  DYVF +D ML   
Sbjct: 396  EAIERAEQLIAGKN--PDMPQDEMKTVARVVGIGAVKYADLSKSRTTDYVFDWDNMLAFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+AS+ + AGI+   L     + P++L  E+E ALA  LL+  +VL  
Sbjct: 454  GNTAPYMQYAYTRVASVFKRAGIDESSL-----TLPLTLTEEREIALATRLLQFEEVLTT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  D+E         RL LA  TAK +K  
Sbjct: 509  VAREGTPHVMCSYLYDLAGLFSGFYEHCQILNADSE----ETRQSRLKLALLTAKTLKTG 564

Query: 1061 FDILNIRT 1068
             D L I T
Sbjct: 565  LDTLGIET 572



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/372 (36%), Positives = 208/372 (55%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+ +A     D  A V  + +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQVLLSDKVSQAL-IAAGAPADCEAQVRPSAKA---QFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  V  K+E+A PGF+N+FL+  +   Q   ++   
Sbjct: 53  -MPPRQLAEKVVQLL--------DLGDVAGKVEIAGPGFINIFLNSDWVARQADQVLNAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R N
Sbjct: 104 KLGIAPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAEFAERARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   A+ ++Y 
Sbjct: 277 LAVESEGATVVFLDEYQNKDGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLGANRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  227 bits (578), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/371 (36%), Positives = 207/371 (55%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+ +A     D  A V  + +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQAL-IAAGAPADCEAQVRPSAKA---QFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  V  K+E+A PGF+N+FL+  +   Q   ++   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDVAGKVEIAGPGFINIFLNSDWVARQADQVLNAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R N
Sbjct: 104  KLGIAPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDAEFAERARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   A+ ++Y 
Sbjct: 277  LAVESEGATVVFLDEYQNKDGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLGANRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|388257986|ref|ZP_10135164.1| arginyl-tRNA synthetase [Cellvibrio sp. BR]
 gi|387938107|gb|EIK44660.1| arginyl-tRNA synthetase [Cellvibrio sp. BR]
          Length = 579

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/562 (39%), Positives = 329/562 (58%), Gaps = 33/562 (5%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+Q N AM   K         NP ++A  I + +         L  + +K+E+A PGF
Sbjct: 36   FGDYQANCAMGAAKAMG-----TNPRELAAKIVAAL--------ELDGIAEKLEIAGPGF 82

Query: 574  VNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            +N+ L+  + GEQI     +  +Q   +     +++D+S PN+AKEMHVGHLRSTIIGD+
Sbjct: 83   INIDLNPQWLGEQIAKAQSDARLQVEQVADAQNIVIDYSGPNLAKEMHVGHLRSTIIGDS 142

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            ++RLLE+ GH+V+R NHVGDWGTQFGMLIA L+++       +  + DL+ FY+++KK F
Sbjct: 143  LARLLEFQGHNVIRQNHVGDWGTQFGMLIAELEEQLGAKGDDAMALKDLEVFYQQAKKHF 202

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            D+DE F  +A + VV LQ  D    K WE    +S     +IY +LNVTL +   RGESF
Sbjct: 203  DDDENFANKAREYVVRLQGGDAQMLKLWEQFKTISLHHSSEIYQQLNVTLKDSDVRGESF 262

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG-----SIPMTIVKSDGGFTYDTSDLAA 804
            Y   +E LV  L+ +GL    DG ++++ ++         P+ I K  GGF Y T+DLAA
Sbjct: 263  YNNDLEPLVNELQTQGLAVESDGAQVVFLQELADKEGNPSPVIIQKQGGGFLYATTDLAA 322

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +R R+   KA  I+Y  D  Q +H + +   ++KA  ++ +   ++ + FG ++G D K 
Sbjct: 323  LRYRVNTLKAKRIMYFIDARQSLHMQQVFTLSRKAKFVD-DSVSLEHLAFGTMMGSDGKP 381

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TVKL+ELL E + R+   + +K   T+L+  E++E  + V  G +KYADL   
Sbjct: 382  FKTRTGGTVKLAELLTEAVERATALVSEKT--TDLSADEVAEIGRKVGIGSVKYADLCKT 439

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVFS++ ML   GNTA YL YAYTR+ SI R AG++ E L+ A     + +  E+E
Sbjct: 440  RTNDYVFSWESMLSFEGNTAPYLQYAYTRVQSIFRKAGVSPESLQAA-----LIIGTEQE 494

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+ ++VL  V R+   H LC YLYDI++ +  FY+ C  ++   +G    +  
Sbjct: 495  KTLAIKLLQFSEVLDQVAREAMPHLLCTYLYDIASLYMSFYEACPILK---DGIAPELRD 551

Query: 1045 GRLLLAEATAKVMKKCFDILNI 1066
             RL L    AK + +  D+L I
Sbjct: 552  SRLRLCHLVAKTIAQGLDLLGI 573



 Score =  248 bits (632), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/394 (37%), Positives = 217/394 (55%), Gaps = 25/394 (6%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+Q N AM   K         NP ++A  I + +         L  + +K+E+A PGF
Sbjct: 36  FGDYQANCAMGAAKAMG-----TNPRELAAKIVAAL--------ELDGIAEKLEIAGPGF 82

Query: 184 VNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           +N+ L+  + GEQI     +  +Q   +     +++D+S PN+AKEMHVGHLRSTIIGD+
Sbjct: 83  INIDLNPQWLGEQIAKAQSDARLQVEQVADAQNIVIDYSGPNLAKEMHVGHLRSTIIGDS 142

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           ++RLLE+ GH+V+R NHVGDWGTQFGMLIA L+++       +  + DL+ FY+++KK F
Sbjct: 143 LARLLEFQGHNVIRQNHVGDWGTQFGMLIAELEEQLGAKGDDAMALKDLEVFYQQAKKHF 202

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           D+DE F  +A + VV LQ  D    K WE    +S     +IY +LNVTL +   RGESF
Sbjct: 203 DDDENFANKAREYVVRLQGGDAQMLKLWEQFKTISLHHSSEIYQQLNVTLKDSDVRGESF 262

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG-----SIPMTIVKSDGGFTYDTSDLAA 414
           Y   +E LV  L+ +GL    DG ++++ ++         P+ I K  GGF Y T+DLAA
Sbjct: 263 YNNDLEPLVNELQTQGLAVESDGAQVVFLQELADKEGNPSPVIIQKQGGGFLYATTDLAA 322

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
           +R R+   KA  I+Y  D R    + Q      K + +  S S +       M     P 
Sbjct: 323 LRYRVNTLKAKRIMYFIDARQSLHMQQVFTLSRKAKFVDDSVSLEHLAFGTMMGSDGKPF 382

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 505
           + R      L+++ T AV+ A   + +KT  +++
Sbjct: 383 KTRTGGTVKLAELLTEAVERATALVSEKTTDLSA 416



 Score =  240 bits (612), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 189/320 (59%), Gaps = 22/320 (6%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGD+Q N AM   K         NP ++A  I + +         L  + +K+E+A PGF
Sbjct: 36   FGDYQANCAMGAAKAMG-----TNPRELAAKIVAAL--------ELDGIAEKLEIAGPGF 82

Query: 1201 VNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            +N+ L+  + GEQI     +  +Q   +     +++D+S PN+AKEMHVGHLRSTIIGD+
Sbjct: 83   INIDLNPQWLGEQIAKAQSDARLQVEQVADAQNIVIDYSGPNLAKEMHVGHLRSTIIGDS 142

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            ++RLLE+ GH+V+R NHVGDWGTQFGMLIA L+++       +  + DL+ FY+++KK F
Sbjct: 143  LARLLEFQGHNVIRQNHVGDWGTQFGMLIAELEEQLGAKGDDAMALKDLEVFYQQAKKHF 202

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            D+DE F  +A + VV LQ  D    K WE    +S     +IY +LNVTL +   RGESF
Sbjct: 203  DDDENFANKAREYVVRLQGGDAQMLKLWEQFKTISLHHSSEIYQQLNVTLKDSDVRGESF 262

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG-----SIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +E LV  L+ +GL    DG ++++ ++         P+ I K  GGF Y T+DLAA
Sbjct: 263  YNNDLEPLVNELQTQGLAVESDGAQVVFLQELADKEGNPSPVIIQKQGGGFLYATTDLAA 322

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
            +R R+   KA  I+Y  D R
Sbjct: 323  LRYRVNTLKAKRIMYFIDAR 342


>gi|408372706|ref|ZP_11170406.1| arginyl-tRNA ligase [Alcanivorax hongdengensis A-11-3]
 gi|407767681|gb|EKF76118.1| arginyl-tRNA ligase [Alcanivorax hongdengensis A-11-3]
          Length = 583

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 234/562 (41%), Positives = 324/562 (57%), Gaps = 35/562 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N A+ L K     G K  P D+A+++ + + ++ A        + K+++A PGF+
Sbjct: 41   GDFATNIALMLAK---PAGMK--PRDLAEALIAALPADSA--------VAKVDIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F +  +   Q+   + +            V+VD+SSPN+AKEMHVGHLRSTIIGD + 
Sbjct: 88   NFFQAEDFLNSQLDAALADAHLAVPRGAPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQAFYKESKKRF 692
            R LE+LGH VVR NHVGDWGTQFGML+A+L ++  +      S  + DL+ FY+ +K+RF
Sbjct: 148  RTLEFLGHQVVRQNHVGDWGTQFGMLLAYLDEQKHEESAAELSRELGDLEGFYRAAKQRF 207

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DE E F  RA   VV LQ  D D  K W    DVS    Q +YDRL V+LT    RGES 
Sbjct: 208  DESEDFATRARGLVVKLQAGDADCLKLWREFNDVSLSHCQAVYDRLGVSLTPSDVRGESA 267

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + Q+V  L  KGLL  D G + ++      +D   +P+ + K+DGG+ Y T+DLAA
Sbjct: 268  YNDDLAQVVADLTAKGLLSEDQGAQCVFMDQFKNKDGDPLPVIVQKADGGYLYATTDLAA 327

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +R R     AD ++Y  D  Q +HF+ +   AK AG + P  T +  +GFG + G D + 
Sbjct: 328  LRYRAGTLGADRMLYFVDQRQALHFQQMFALAKLAGFV-PEATELAHMGFGTMNGPDGRP 386

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR G TVKL +LLDE  +R+   + +K+   EL   EL    +AV  G +KYADLS N
Sbjct: 387  FKTRDGGTVKLIDLLDEAEQRAYALVSEKS--GELDEDELRSIARAVGIGAVKYADLSKN 444

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R+ DY+F+FD+ML   GNTA YLLYAYTR+AS+ R AG     L + A S    L  + E
Sbjct: 445  RSSDYIFNFDQMLSFEGNTAPYLLYAYTRVASVFRKAG-----LAMDAVSGDFQLNDDAE 499

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  L++  +VL  V      H LC YLYD++  FS FY++C  +  D       +  
Sbjct: 500  QALAARLVQFGEVLQSVADKGQPHLLCAYLYDVAGLFSSFYEHCPILSIDD----PALKQ 555

Query: 1045 GRLLLAEATAKVMKKCFDILNI 1066
             RL LA  TA+ +K+  ++L +
Sbjct: 556  SRLKLAALTARTLKQGMELLGL 577



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/397 (38%), Positives = 215/397 (54%), Gaps = 36/397 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N A+ L K     G K  P D+A+++ + + ++ A        + K+++A PGF+
Sbjct: 41  GDFATNIALMLAK---PAGMK--PRDLAEALIAALPADSA--------VAKVDIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F +  +   Q+   + +            V+VD+SSPN+AKEMHVGHLRSTIIGD + 
Sbjct: 88  NFFQAEDFLNSQLDAALADAHLAVPRGAPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQAFYKESKKRF 302
           R LE+LGH VVR NHVGDWGTQFGML+A+L ++  +      S  + DL+ FY+ +K+RF
Sbjct: 148 RTLEFLGHQVVRQNHVGDWGTQFGMLLAYLDEQKHEESAAELSRELGDLEGFYRAAKQRF 207

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DE E F  RA   VV LQ  D D  K W    DVS    Q +YDRL V+LT    RGES 
Sbjct: 208 DESEDFATRARGLVVKLQAGDADCLKLWREFNDVSLSHCQAVYDRLGVSLTPSDVRGESA 267

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + Q+V  L  KGLL  D G + ++      +D   +P+ + K+DGG+ Y T+DLAA
Sbjct: 268 YNDDLAQVVADLTAKGLLSEDQGAQCVFMDQFKNKDGDPLPVIVQKADGGYLYATTDLAA 327

Query: 415 IRQRIEEEKADWIVYVTDHRS--YHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVP-- 470
           +R R     AD ++Y  D R   + Q + A+A   K  G    ++         MN P  
Sbjct: 328 LRYRAGTLGADRMLYFVDQRQALHFQQMFALA---KLAGFVPEATELAHMGFGTMNGPDG 384

Query: 471 ----VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASV 503
                RD  +V+  L D+   A Q A+  + +K+  +
Sbjct: 385 RPFKTRDGGTVK--LIDLLDEAEQRAYALVSEKSGEL 419



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 185/320 (57%), Gaps = 23/320 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N A+ L K     G K  P D+A+++ + + ++ A        + K+++A PGF+
Sbjct: 41   GDFATNIALMLAK---PAGMK--PRDLAEALIAALPADSA--------VAKVDIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F +  +   Q+   + +            V+VD+SSPN+AKEMHVGHLRSTIIGD + 
Sbjct: 88   NFFQAEDFLNSQLDAALADAHLAVPRGAPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQAFYKESKKRF 1319
            R LE+LGH VVR NHVGDWGTQFGML+A+L ++  +      S  + DL+ FY+ +K+RF
Sbjct: 148  RTLEFLGHQVVRQNHVGDWGTQFGMLLAYLDEQKHEESAAELSRELGDLEGFYRAAKQRF 207

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DE E F  RA   VV LQ  D D  K W    DVS    Q +YDRL V+LT    RGES 
Sbjct: 208  DESEDFATRARGLVVKLQAGDADCLKLWREFNDVSLSHCQAVYDRLGVSLTPSDVRGESA 267

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + Q+V  L  KGLL  D G + ++      +D   +P+ + K+DGG+ Y T+DLAA
Sbjct: 268  YNDDLAQVVADLTAKGLLSEDQGAQCVFMDQFKNKDGDPLPVIVQKADGGYLYATTDLAA 327

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
            +R R     AD ++Y  D R
Sbjct: 328  LRYRAGTLGADRMLYFVDQR 347


>gi|392311208|ref|ZP_10273742.1| arginyl-tRNA ligase [Pseudoalteromonas citrea NCIMB 1889]
          Length = 580

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 238/608 (39%), Positives = 344/608 (56%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  L +    A+  A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1    MNIKTILIEKANAAMGAAGIPEGSNPAVTQSTRPQ----FGDYQINGAMGAAKALK---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-------SRVYAGEQI 587
              NP ++AQ I          N  ++ + +K E+A PGF+N+ L       S   A +  
Sbjct: 53   -TNPRELAQKIID--------NLDVSDIAEKTEIAGPGFINIHLKPEFLSNSLAAANQDQ 103

Query: 588  KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
            K  +    QP       +V+VDFSSPN+AKEMHVGHLRSTIIGD++ R LE+ G  VVR 
Sbjct: 104  KLAVAEHSQPQ------KVVVDFSSPNLAKEMHVGHLRSTIIGDSVVRALEFRGDTVVRQ 157

Query: 648  NHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 706
            NH+GDWGTQFGMLIAHL+D     +  +S  +ADL+ FY+++KKRFD++E F  +A   V
Sbjct: 158  NHMGDWGTQFGMLIAHLEDLLNQGIDLESVALADLETFYRDAKKRFDDEEGFADKARNYV 217

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEK 763
            V LQ  D   +K W +  D S +  +++Y RLNVTLT      ES Y   +  ++  L+ 
Sbjct: 218  VKLQSGDAHCEKLWRLFIDTSVKHSEEVYQRLNVTLTRNDIMAESAYNGELNTIISLLKD 277

Query: 764  KGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIV 818
            K +   D G ++++        G   + IV KS GGF Y T+DLAA   R  +  AD I+
Sbjct: 278  KNIAVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYATTDLAACDYRSNKLGADRIL 337

Query: 819  YVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSEL 878
               D  Q +HF  +E  A+KAG+L  ++T  +F  FG ++G D K FKTR+G TVKL++L
Sbjct: 338  IFVDARQSLHFNQVELTARKAGLLR-DETSYEFSPFGTMMGSDGKPFKTRTGGTVKLADL 396

Query: 879  LDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            L+E + R+ DKL D  R + L+ TE +E  + V  G +KYADLS +R  DY+F++D ML 
Sbjct: 397  LEEAISRATDKLAD--RESGLSDTERAEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLS 454

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
              G TA YL YAYTR+ SI R A I+S     +A +  +++E  +E ALA  LL++ +VL
Sbjct: 455  FEGATAPYLQYAYTRVRSIFRKADIDS-----SALTATINIEQPQEKALAIKLLQLEEVL 509

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
             L+  +   H LC YLY++++ +  FY+ C  ++ D    ++     RL+L    A  ++
Sbjct: 510  DLMISEATPHVLCGYLYELASLYMTFYEACPILKDDVASDVR---DSRLVLCNLVANTLR 566

Query: 1059 KCFDILNI 1066
               D+L I
Sbjct: 567  TGLDLLGI 574



 Score =  227 bits (579), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 155/441 (35%), Positives = 222/441 (50%), Gaps = 42/441 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  L +    A+  A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1   MNIKTILIEKANAAMGAAGIPEGSNPAVTQSTRPQ----FGDYQINGAMGAAKALK---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-------SRVYAGEQI 197
             NP ++AQ I          N  ++ + +K E+A PGF+N+ L       S   A +  
Sbjct: 53  -TNPRELAQKIID--------NLDVSDIAEKTEIAGPGFINIHLKPEFLSNSLAAANQDQ 103

Query: 198 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 257
           K  +    QP       +V+VDFSSPN+AKEMHVGHLRSTIIGD++ R LE+ G  VVR 
Sbjct: 104 KLAVAEHSQPQ------KVVVDFSSPNLAKEMHVGHLRSTIIGDSVVRALEFRGDTVVRQ 157

Query: 258 NHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
           NH+GDWGTQFGMLIAHL+D     +  +S  +ADL+ FY+++KKRFD++E F  +A   V
Sbjct: 158 NHMGDWGTQFGMLIAHLEDLLNQGIDLESVALADLETFYRDAKKRFDDEEGFADKARNYV 217

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEK 373
           V LQ  D   +K W +  D S +  +++Y RLNVTLT      ES Y   +  ++  L+ 
Sbjct: 218 VKLQSGDAHCEKLWRLFIDTSVKHSEEVYQRLNVTLTRNDIMAESAYNGELNTIISLLKD 277

Query: 374 KGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIV 428
           K +   D G ++++        G   + IV KS GGF Y T+DLAA   R  +  AD I+
Sbjct: 278 KNIAVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYATTDLAACDYRSNKLGADRIL 337

Query: 429 YVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVF 485
              D R      Q      K   +   +S +       M     P + R      L+D+ 
Sbjct: 338 IFVDARQSLHFNQVELTARKAGLLRDETSYEFSPFGTMMGSDGKPFKTRTGGTVKLADLL 397

Query: 486 THAVQVAFPELGDKTASVAST 506
             A+  A  +L D+ + ++ T
Sbjct: 398 EEAISRATDKLADRESGLSDT 418



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/366 (38%), Positives = 197/366 (53%), Gaps = 39/366 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  L +    A+  A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1    MNIKTILIEKANAAMGAAGIPEGSNPAVTQSTRPQ----FGDYQINGAMGAAKALK---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-------SRVYAGEQI 1214
              NP ++AQ I          N  ++ + +K E+A PGF+N+ L       S   A +  
Sbjct: 53   -TNPRELAQKIID--------NLDVSDIAEKTEIAGPGFINIHLKPEFLSNSLAAANQDQ 103

Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
            K  +    QP       +V+VDFSSPN+AKEMHVGHLRSTIIGD++ R LE+ G  VVR 
Sbjct: 104  KLAVAEHSQPQ------KVVVDFSSPNLAKEMHVGHLRSTIIGDSVVRALEFRGDTVVRQ 157

Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
            NH+GDWGTQFGMLIAHL+D     +  +S  +ADL+ FY+++KKRFD++E F  +A   V
Sbjct: 158  NHMGDWGTQFGMLIAHLEDLLNQGIDLESVALADLETFYRDAKKRFDDEEGFADKARNYV 217

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEK 1390
            V LQ  D   +K W +  D S +  +++Y RLNVTLT      ES Y   +  ++  L+ 
Sbjct: 218  VKLQSGDAHCEKLWRLFIDTSVKHSEEVYQRLNVTLTRNDIMAESAYNGELNTIISLLKD 277

Query: 1391 KGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIV 1445
            K +   D G ++++        G   + IV KS GGF Y T+DLAA   R  +  AD I+
Sbjct: 278  KNIAVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYATTDLAACDYRSNKLGADRIL 337

Query: 1446 YVTDHR 1451
               D R
Sbjct: 338  IFVDAR 343


>gi|163750994|ref|ZP_02158226.1| arginyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161329284|gb|EDQ00282.1| arginyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 581

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/564 (40%), Positives = 333/564 (59%), Gaps = 37/564 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L KI      +KNP +IAQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41   GDFATNLAMMLTKI-----ARKNPREIAQ----LIIDSLPQDSQVAKV----EIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F+       Q+   + +      L ++  ++VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDEDALANQLMAALKDDHLGICLPEQQTIVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 693
            R LE+ GH V+R NHVGDWGTQFGML+A++++ +  +       +ADL+ FY+ +K RFD
Sbjct: 148  RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAQMDLADLETFYRAAKVRFD 207

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E E F  RA + VV+LQ  D    K W    D+S      +Y RL V+LT    RGES Y
Sbjct: 208  ESEDFAVRARKLVVSLQSGDEYCNKLWREFNDISLNHCHDVYARLGVSLTREDVRGESAY 267

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 805
               + ++V  L+ +GLL   +G K+++      ++   +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268  NADLAEVVKELKAQGLLSESNGAKVVFQDEFKNKEGDPLPVIIQKADGGYLYATSDMAAM 327

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R +   AD ++Y  DL Q +HF+ + + A+KA  + P +  ++ +GFG + G D + F
Sbjct: 328  RYRSKVLNADRVLYFVDLRQALHFQQVFKLARKANFVRP-ELSLEHMGFGTMNGADGRPF 386

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSG  VKL +LL+E   R+L+ ++ KN   ++   EL +  + V    +KYADLS NR
Sbjct: 387  KTRSGGVVKLVDLLNEADTRALELVRSKN--PDMDEAELEKIAKVVGISSVKYADLSKNR 444

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI-ARTAGINSEDLRVAAQSTPVSLEHEKE 984
              DY+FSF++ML   GNTA YLLYAYTR+  I  R   I+  D ++        LEH+KE
Sbjct: 445  TSDYIFSFEQMLSFEGNTAPYLLYAYTRVTGIFKRAKDIDLSDAKIV-------LEHDKE 497

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              L   L +  +VL  +      H +C YL++++ AFS FY+ C  +  + E + K+   
Sbjct: 498  KNLGNKLAQFAEVLSRMVAKGQPHAMCAYLFELAGAFSSFYEACPVLAAETEAQKKS--- 554

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RLL+A+ TAK +K+  D+L I T
Sbjct: 555  -RLLIAQLTAKTLKQGLDLLGIET 577



 Score =  229 bits (585), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/329 (40%), Positives = 193/329 (58%), Gaps = 25/329 (7%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L KI      +KNP +IAQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41  GDFATNLAMMLTKI-----ARKNPREIAQ----LIIDSLPQDSQVAKV----EIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F+       Q+   + +      L ++  ++VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88  NFFIDEDALANQLMAALKDDHLGICLPEQQTIVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 303
           R LE+ GH V+R NHVGDWGTQFGML+A++++ +  +       +ADL+ FY+ +K RFD
Sbjct: 148 RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAQMDLADLETFYRAAKVRFD 207

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E E F  RA + VV+LQ  D    K W    D+S      +Y RL V+LT    RGES Y
Sbjct: 208 ESEDFAVRARKLVVSLQSGDEYCNKLWREFNDISLNHCHDVYARLGVSLTREDVRGESAY 267

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 415
              + ++V  L+ +GLL   +G K+++      ++   +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268 NADLAEVVKELKAQGLLSESNGAKVVFQDEFKNKEGDPLPVIIQKADGGYLYATSDMAAM 327

Query: 416 RQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           R R +   AD ++Y  D R    + QV +
Sbjct: 328 RYRSKVLNADRVLYFVDLRQALHFQQVFK 356



 Score =  229 bits (585), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/329 (40%), Positives = 193/329 (58%), Gaps = 25/329 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L KI      +KNP +IAQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41   GDFATNLAMMLTKI-----ARKNPREIAQ----LIIDSLPQDSQVAKV----EIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F+       Q+   + +      L ++  ++VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDEDALANQLMAALKDDHLGICLPEQQTIVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 1320
            R LE+ GH V+R NHVGDWGTQFGML+A++++ +  +       +ADL+ FY+ +K RFD
Sbjct: 148  RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAQMDLADLETFYRAAKVRFD 207

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E E F  RA + VV+LQ  D    K W    D+S      +Y RL V+LT    RGES Y
Sbjct: 208  ESEDFAVRARKLVVSLQSGDEYCNKLWREFNDISLNHCHDVYARLGVSLTREDVRGESAY 267

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 1432
               + ++V  L+ +GLL   +G K+++      ++   +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268  NADLAEVVKELKAQGLLSESNGAKVVFQDEFKNKEGDPLPVIIQKADGGYLYATSDMAAM 327

Query: 1433 RQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            R R +   AD ++Y  D R    + QV +
Sbjct: 328  RYRSKVLNADRVLYFVDLRQALHFQQVFK 356


>gi|437666130|ref|ZP_20814911.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 653049 13-19]
 gi|435264666|gb|ELO43569.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Enteritidis str. 653049 13-19]
          Length = 525

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/533 (41%), Positives = 318/533 (59%), Gaps = 30/533 (5%)

Query: 549  VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 605
            +  ++ T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  
Sbjct: 6    LAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQT 62

Query: 606  VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 665
            ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 63   IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLE 122

Query: 666  DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 725
             +  +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 123  KQQQEN-AGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVD 181

Query: 726  VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--- 779
            ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   
Sbjct: 182  ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 241

Query: 780  DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAK 837
            ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D  Q  H        +
Sbjct: 242  NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVR 301

Query: 838  KAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT 897
            KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE L R+   + +KN   
Sbjct: 302  KAGYV-PDSVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--P 358

Query: 898  ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI 957
            +++  EL +   AV  G +KYADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+
Sbjct: 359  DMSADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSV 418

Query: 958  ARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017
             R A I+ +    A  S PV +  ++E  LA  LL+  + L +V R+   H +C YLYD+
Sbjct: 419  FRKADIDEQ----ALASAPVIISEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDV 474

Query: 1018 STAFSEFYDNCYCI--EKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +  FS FY++C  +  E DA      V   RL LA+ TAK +K   D L I T
Sbjct: 475  AGLFSGFYEHCPILSAENDA------VRNSRLKLAQLTAKTLKLGLDTLGIET 521



 Score =  233 bits (593), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 122/295 (41%), Positives = 182/295 (61%), Gaps = 15/295 (5%)

Query: 159 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 215
           +  ++ T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  
Sbjct: 6   LAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQT 62

Query: 216 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 275
           ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 63  IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLE 122

Query: 276 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 335
            +  +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 123 KQQQEN-AGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVD 181

Query: 336 VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--- 389
           ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   
Sbjct: 182 ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 241

Query: 390 DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 242 NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 296



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/294 (41%), Positives = 181/294 (61%), Gaps = 15/294 (5%)

Query: 1176 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 1232
            +  ++ T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  
Sbjct: 6    LAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQT 62

Query: 1233 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 1292
            ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 63   IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLE 122

Query: 1293 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 1352
             +  +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 123  KQQQEN-AGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVD 181

Query: 1353 VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--- 1406
            ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   
Sbjct: 182  ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 241

Query: 1407 DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 242  NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 295


>gi|365834464|ref|ZP_09375910.1| arginine--tRNA ligase [Hafnia alvei ATCC 51873]
 gi|364569241|gb|EHM46864.1| arginine--tRNA ligase [Hafnia alvei ATCC 51873]
          Length = 576

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 236/611 (38%), Positives = 342/611 (55%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  T A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQALLSDKVTQALVAA----GAPANSEALVRQSAKAQFGDYQANGVMGAAKKLGIA-- 54

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +         T+  L  +  K+E+A PGF+N+FL   +  +Q++  +   
Sbjct: 55   ---PRQLAEQVL--------THLELDGIASKVEIAGPGFINIFLDPAWLAKQVEIALADE 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVAAVKPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNEHANEMDLSDLEAFYREAKKHYDEDAEFAERARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    QK Y RLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCREMWRKLVDITMSQNQKNYQRLNVTLTKDDVMGESLYNSMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTRSG T+KLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRSGGTIKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   +L+  EL++  + V  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAVERAGKLIAEKN--PDLSSDELAKLVEVVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR++SI + AGI+ + L     S  + L  ++E ALA  L++  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVSSIFKRAGIDEQSL-----SGNIVLTEDREKALAARLIQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY+ C  +  ++E +       RL LA  TA+ +
Sbjct: 506  ITQVAREGTPHVMCTYLYDLAGLFSSFYEACPILTAESEEQ----RNSRLQLAALTARTL 561

Query: 1058 KKCFDILNIRT 1068
            K   D L I T
Sbjct: 562  KTGLDTLGIET 572



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 157/441 (35%), Positives = 229/441 (51%), Gaps = 47/441 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  T A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQALLSDKVTQALVAA----GAPANSEALVRQSAKAQFGDYQANGVMGAAKKLGIA-- 54

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +         T+  L  +  K+E+A PGF+N+FL   +  +Q++  +   
Sbjct: 55  ---PRQLAEQVL--------THLELDGIASKVEIAGPGFINIFLDPAWLAKQVEIALADE 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 RLGVAAVKPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNEHANEMDLSDLEAFYREAKKHYDEDAEFAERARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    QK Y RLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCREMWRKLVDITMSQNQKNYQRLNVTLTKDDVMGESLYNSMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 428 VYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDV 484
           +Y  D R +  ++QA     K   +  S S +       +     P + R      LSD+
Sbjct: 334 LYYIDSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFKTRSGGTIKLSDL 393

Query: 485 FTHAVQVAFPELGDKTASVAS 505
              AV+ A   + +K   ++S
Sbjct: 394 LDEAVERAGKLIAEKNPDLSS 414



 Score =  236 bits (603), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 143/374 (38%), Positives = 205/374 (54%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  T A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQALLSDKVTQALVAA----GAPANSEALVRQSAKAQFGDYQANGVMGAAKKLGIA-- 54

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +         T+  L  +  K+E+A PGF+N+FL   +  +Q++  +   
Sbjct: 55   ---PRQLAEQVL--------THLELDGIASKVEIAGPGFINIFLDPAWLAKQVEIALADE 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVAAVKPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNEHANEMDLSDLEAFYREAKKHYDEDAEFAERARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    QK Y RLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCREMWRKLVDITMSQNQKNYQRLNVTLTKDDVMGESLYNSMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|349575556|ref|ZP_08887467.1| arginine--tRNA ligase [Neisseria shayeganii 871]
 gi|348012824|gb|EGY51760.1| arginine--tRNA ligase [Neisseria shayeganii 871]
          Length = 572

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 234/564 (41%), Positives = 327/564 (57%), Gaps = 39/564 (6%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+Q N  M   K       K+NP ++AQ +A+    +LA N    ++I+  EVA PGF
Sbjct: 35   FGDYQINGVMGAAK-----QRKQNPRELAQQVAN----QLAGN----RLIESAEVAGPGF 81

Query: 574  VNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            +N+ L   +  +++   + +G       N+   V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 82   INLRLKADFLAQEVDAALHSGHFNIRRTNEPQSVVIDYSSPNLAKEMHVGHLRSSIIGDS 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            ++R+L +LGH V+R NHVGDWGTQFGML+AHL  +  D    +  +ADL+ FY+++K RF
Sbjct: 142  LARVLGFLGHQVIRQNHVGDWGTQFGMLVAHLVAQQQD--NAAFELADLEQFYRDAKVRF 199

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DED  F   A   VV LQ  D      W+    +S    Q +YD L + LT     GES 
Sbjct: 200  DEDPAFADTARDYVVKLQGGDEQVLALWKQFVAMSLSHAQNVYDTLGLLLTPDDVAGESM 259

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   ++ +V  L  +GL   DDG K+++      +D       + K  GGF Y ++DLA 
Sbjct: 260  YNDDLQTVVDELAAQGLAVDDDGAKVVFLDEFKNQDGDPAAFIVQKQGGGFLYSSTDLAC 319

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            IR R+   +AD ++YV D  Q +HF+ L   A+KAG L P     + + FG ++G+D K 
Sbjct: 320  IRYRVNRLQADRLLYVVDARQSLHFQQLFTVARKAGWL-PESATAEHIPFGTMMGKDGKP 378

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL +LL+E + R+   + +KN    L+P E +E  + V  G +KYADLS N
Sbjct: 379  FKTRSGDTVKLVDLLNEAVERATALVAEKN--PALSPAEAAEIGRVVGIGAVKYADLSKN 436

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R+ DYVF +D+ML   GNTA YL YAYTR+ S+ R AG    D   AAQ  PV  E   E
Sbjct: 437  RSSDYVFDWDQMLSFEGNTAPYLQYAYTRVQSVFRKAG----DWDAAAQ--PVFTE-PLE 489

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+  DVL  V      H+L  YLY ++  FS FY+ C  ++  AEG   +V  
Sbjct: 490  KQLAVELLKFEDVLCNVAESCHPHYLAAYLYQVAALFSRFYEACPILK--AEG---SVRN 544

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA+ T   +K+  ++L I T
Sbjct: 545  SRLQLAKLTGDTLKQGLELLGIET 568



 Score =  226 bits (576), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 210/393 (53%), Gaps = 27/393 (6%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+Q N  M   K       K+NP ++AQ +A+    +LA N    ++I+  EVA PGF
Sbjct: 35  FGDYQINGVMGAAK-----QRKQNPRELAQQVAN----QLAGN----RLIESAEVAGPGF 81

Query: 184 VNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           +N+ L   +  +++   + +G       N+   V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 82  INLRLKADFLAQEVDAALHSGHFNIRRTNEPQSVVIDYSSPNLAKEMHVGHLRSSIIGDS 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           ++R+L +LGH V+R NHVGDWGTQFGML+AHL  +  D    +  +ADL+ FY+++K RF
Sbjct: 142 LARVLGFLGHQVIRQNHVGDWGTQFGMLVAHLVAQQQD--NAAFELADLEQFYRDAKVRF 199

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DED  F   A   VV LQ  D      W+    +S    Q +YD L + LT     GES 
Sbjct: 200 DEDPAFADTARDYVVKLQGGDEQVLALWKQFVAMSLSHAQNVYDTLGLLLTPDDVAGESM 259

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   ++ +V  L  +GL   DDG K+++      +D       + K  GGF Y ++DLA 
Sbjct: 260 YNDDLQTVVDELAAQGLAVDDDGAKVVFLDEFKNQDGDPAAFIVQKQGGGFLYSSTDLAC 319

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
           IR R+   +AD ++YV D R      Q      K   +  S++++       M     P 
Sbjct: 320 IRYRVNRLQADRLLYVVDARQSLHFQQLFTVARKAGWLPESATAEHIPFGTMMGKDGKPF 379

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA 504
           + R      L D+   AV+ A   + +K  +++
Sbjct: 380 KTRSGDTVKLVDLLNEAVERATALVAEKNPALS 412



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/320 (40%), Positives = 185/320 (57%), Gaps = 24/320 (7%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGD+Q N  M   K       K+NP ++AQ +A+    +LA N    ++I+  EVA PGF
Sbjct: 35   FGDYQINGVMGAAK-----QRKQNPRELAQQVAN----QLAGN----RLIESAEVAGPGF 81

Query: 1201 VNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            +N+ L   +  +++   + +G       N+   V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 82   INLRLKADFLAQEVDAALHSGHFNIRRTNEPQSVVIDYSSPNLAKEMHVGHLRSSIIGDS 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            ++R+L +LGH V+R NHVGDWGTQFGML+AHL  +  D    +  +ADL+ FY+++K RF
Sbjct: 142  LARVLGFLGHQVIRQNHVGDWGTQFGMLVAHLVAQQQD--NAAFELADLEQFYRDAKVRF 199

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DED  F   A   VV LQ  D      W+    +S    Q +YD L + LT     GES 
Sbjct: 200  DEDPAFADTARDYVVKLQGGDEQVLALWKQFVAMSLSHAQNVYDTLGLLLTPDDVAGESM 259

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   ++ +V  L  +GL   DDG K+++      +D       + K  GGF Y ++DLA 
Sbjct: 260  YNDDLQTVVDELAAQGLAVDDDGAKVVFLDEFKNQDGDPAAFIVQKQGGGFLYSSTDLAC 319

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
            IR R+   +AD ++YV D R
Sbjct: 320  IRYRVNRLQADRLLYVVDAR 339


>gi|345874302|ref|ZP_08826116.1| arginine--tRNA ligase [Neisseria weaveri LMG 5135]
 gi|343970575|gb|EGV38748.1| arginine--tRNA ligase [Neisseria weaveri LMG 5135]
          Length = 572

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/567 (40%), Positives = 329/567 (58%), Gaps = 45/567 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGDFQ N  M   K       K+NP ++AQ++A+ ++         + VI+  EVA PGF
Sbjct: 35   FGDFQINGVMGTAK-----QAKQNPRELAQTVAAALSG--------SSVIESAEVAGPGF 81

Query: 574  VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 630
            +N+ L   +  E I+  + +   GV+    ++   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82   INLRLHADFLAENIQTALNDSRFGVKETAQSQT--VVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 631  DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL-QDKFPDYLTKSPPIADLQAFYKESK 689
            D+I+R+L Y+GH VV  NHVGDWGTQFGML+A++ + +  D   K   +ADL+ FY+ +K
Sbjct: 140  DSIARVLAYMGHRVVAQNHVGDWGTQFGMLVAYMVEQQKADAEFK---LADLEQFYRNAK 196

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
             RFDEDE F   + + VV LQ  D      W+   ++S    Q +YD L + LT     G
Sbjct: 197  VRFDEDEAFADTSREYVVKLQGGDEAVLALWKQFVEISLSHAQNVYDTLGLKLTPEDVAG 256

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSD 801
            ES Y   ++ ++  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++D
Sbjct: 257  ESMYNDDLQPVIDELSEKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKKGGGFLYSSTD 316

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LA +R R+    AD ++YV D  Q +HF+ +   A+KAG L P +   + + FG ++G+D
Sbjct: 317  LACVRYRVGRLNADRLLYVVDARQALHFQQMFTVARKAGWL-PEQVAAEHIAFGTMMGKD 375

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSGDTVKL ELLDE   R+   +K KN   +L+  E +   + V  G +KYADL
Sbjct: 376  GKPFKTRSGDTVKLVELLDEAQERATALVKAKN--PDLSGEEAANIGKTVGIGAVKYADL 433

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA YL YAYTR+ S+ + AG  + D        P+ L  
Sbjct: 434  SKNRTSDYVFDWDSMLSFEGNTAPYLQYAYTRVQSVFKKAGEWNAD-------APLQLNE 486

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
              E  LA  LL+  DVL  V      H+L  YLY ++T FS FY+ C  ++  AEG ++ 
Sbjct: 487  PLEKQLAVELLKFEDVLQSVAETSYPHYLAAYLYQVATLFSRFYEACPILK--AEGSVRN 544

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA+ T  ++K+  ++L I T
Sbjct: 545  T---RLQLAKLTGGILKQGLELLGIET 568



 Score =  223 bits (567), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 130/323 (40%), Positives = 190/323 (58%), Gaps = 30/323 (9%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGDFQ N  M   K       K+NP ++AQ++A+ ++         + VI+  EVA PGF
Sbjct: 35  FGDFQINGVMGTAK-----QAKQNPRELAQTVAAALSG--------SSVIESAEVAGPGF 81

Query: 184 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           +N+ L   +  E I+  + +   GV+    ++   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82  INLRLHADFLAENIQTALNDSRFGVKETAQSQT--VVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL-QDKFPDYLTKSPPIADLQAFYKESK 299
           D+I+R+L Y+GH VV  NHVGDWGTQFGML+A++ + +  D   K   +ADL+ FY+ +K
Sbjct: 140 DSIARVLAYMGHRVVAQNHVGDWGTQFGMLVAYMVEQQKADAEFK---LADLEQFYRNAK 196

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
            RFDEDE F   + + VV LQ  D      W+   ++S    Q +YD L + LT     G
Sbjct: 197 VRFDEDEAFADTSREYVVKLQGGDEAVLALWKQFVEISLSHAQNVYDTLGLKLTPEDVAG 256

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSD 411
           ES Y   ++ ++  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++D
Sbjct: 257 ESMYNDDLQPVIDELSEKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKKGGGFLYSSTD 316

Query: 412 LAAIRQRIEEEKADWIVYVTDHR 434
           LA +R R+    AD ++YV D R
Sbjct: 317 LACVRYRVGRLNADRLLYVVDAR 339



 Score =  223 bits (567), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 130/323 (40%), Positives = 190/323 (58%), Gaps = 30/323 (9%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGDFQ N  M   K       K+NP ++AQ++A+ ++         + VI+  EVA PGF
Sbjct: 35   FGDFQINGVMGTAK-----QAKQNPRELAQTVAAALSG--------SSVIESAEVAGPGF 81

Query: 1201 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            +N+ L   +  E I+  + +   GV+    ++   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82   INLRLHADFLAENIQTALNDSRFGVKETAQSQT--VVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL-QDKFPDYLTKSPPIADLQAFYKESK 1316
            D+I+R+L Y+GH VV  NHVGDWGTQFGML+A++ + +  D   K   +ADL+ FY+ +K
Sbjct: 140  DSIARVLAYMGHRVVAQNHVGDWGTQFGMLVAYMVEQQKADAEFK---LADLEQFYRNAK 196

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
             RFDEDE F   + + VV LQ  D      W+   ++S    Q +YD L + LT     G
Sbjct: 197  VRFDEDEAFADTSREYVVKLQGGDEAVLALWKQFVEISLSHAQNVYDTLGLKLTPEDVAG 256

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSD 1428
            ES Y   ++ ++  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++D
Sbjct: 257  ESMYNDDLQPVIDELSEKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKKGGGFLYSSTD 316

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LA +R R+    AD ++YV D R
Sbjct: 317  LACVRYRVGRLNADRLLYVVDAR 339


>gi|54308257|ref|YP_129277.1| arginyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400047|sp|Q6LTA1.1|SYR_PHOPR RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|46912685|emb|CAG19475.1| putative arginyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 576

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/564 (39%), Positives = 331/564 (58%), Gaps = 34/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDVL--------DLDGIAEKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL + +   + ++ + +        K+  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDKSWLAARAEEALTDDRIGVAAEKQQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+VVR NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVVRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  RA   VV LQ  D    + W+ + DV+    Q  YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVRARAFVVKLQSGDEYCAEMWKKLVDVTMVQNQINYDRLNVSLTRDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL    DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNYMLPGIVADLKEKGLAVESDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRFEQLNADRVLYFIDSRQHQHLMQAWSIVRKAGYV-PEEVTLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   +L   E  +  + VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDESEVRAAKLIEAKN--PDLDTAEKDKIAKTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI + A +N  DL     + P+ +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFKRADVNLADL-----THPIVINDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL  TLL+  + ++ V+R+   H +C YL++++  FS FY+ C  +  +     + V  
Sbjct: 494  QALLSTLLQFEEAVLNVSREGQPHLMCTYLFELAGKFSSFYEACPILNAE-----EAVKQ 548

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  D+L I T
Sbjct: 549  SRLKLALLTAKTIKQGLDLLGIET 572



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDVL--------DLDGIAEKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL + +   + ++ + +        K+  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDKSWLAARAEEALTDDRIGVAAEKQQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+VVR NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHNVVRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  RA   VV LQ  D    + W+ + DV+    Q  YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVRARAFVVKLQSGDEYCAEMWKKLVDVTMVQNQINYDRLNVSLTRDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL    DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNYMLPGIVADLKEKGLAVESDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E+  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRFEQLNADRVLYFIDSRQHQHLMQA 349



 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 195/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDVL--------DLDGIAEKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL + +   + ++ + +        K+  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDKSWLAARAEEALTDDRIGVAAEKQQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+VVR NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVVRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  RA   VV LQ  D    + W+ + DV+    Q  YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVRARAFVVKLQSGDEYCAEMWKKLVDVTMVQNQINYDRLNVSLTRDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL    DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNYMLPGIVADLKEKGLAVESDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E+  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRFEQLNADRVLYFIDSRQHQHLMQ 348


>gi|441502154|ref|ZP_20984165.1| Arginyl-tRNA synthetase [Photobacterium sp. AK15]
 gi|441429901|gb|ELR67352.1| Arginyl-tRNA synthetase [Photobacterium sp. AK15]
          Length = 576

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/564 (40%), Positives = 330/564 (58%), Gaps = 34/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDVL--------DLDGIAEKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS+ +  E+ +  + +        ++  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSKTWLAERAEAALADERLGVAKEEQKTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH VVR NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEHLGHKVVRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DED  F + A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDAEFAEHARNYVVKLQGGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKEKGLAVEDDGAQVVFLDEYKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KA  + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKADYV-PEEVTLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E +   + VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAAKLIEQKN--PELDAEEKANIAKTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI + AG+   DL     + PV +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFKRAGVEQADL-----THPVVINEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL  TLL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  QALLSTLLQFEEAVQTVAREGHPHVMCSYLFELAGKFSSFYEACPILNAEEE-----VKQ 548

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  D+L I T
Sbjct: 549  SRLKLALLTAKTIKQGLDLLGIET 572



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 198/328 (60%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDVL--------DLDGIAEKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS+ +  E+ +  + +        ++  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSKTWLAERAEAALADERLGVAKEEQKTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH VVR NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEHLGHKVVRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DED  F + A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDAEFAEHARNYVVKLQGGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPGIVADLKEKGLAVEDDGAQVVFLDEYKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQA 349



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 133/327 (40%), Positives = 197/327 (60%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDVL--------DLDGIAEKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS+ +  E+ +  + +        ++  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSKTWLAERAEAALADERLGVAKEEQKTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH VVR NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEHLGHKVVRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DED  F + A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDAEFAEHARNYVVKLQGGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKEKGLAVEDDGAQVVFLDEYKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|395230689|ref|ZP_10408990.1| arginyl-tRNA synthetase [Citrobacter sp. A1]
 gi|424733032|ref|ZP_18161602.1| arginyl-trna synthetase [Citrobacter sp. L17]
 gi|394715632|gb|EJF21440.1| arginyl-tRNA synthetase [Citrobacter sp. A1]
 gi|422892580|gb|EKU32435.1| arginyl-trna synthetase [Citrobacter sp. L17]
          Length = 577

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  PT   K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALASDRLGVTQPT---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L     +  V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESAL----ANAQVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  INEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA+ TAK +K   D L I T
Sbjct: 546  --EIRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/334 (40%), Positives = 192/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  PT   K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAQHVQQALASDRLGVTQPT---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  PT   K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALASDRLGVTQPT---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|420372851|ref|ZP_14873049.1| arginyl-tRNA synthetase [Shigella flexneri 1235-66]
 gi|391317767|gb|EIQ75017.1| arginyl-tRNA synthetase [Shigella flexneri 1235-66]
          Length = 577

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L     +  V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESAL----ANAQVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  INEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA+ TAK +K   D L I T
Sbjct: 546  --EIRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 192/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|330501487|ref|YP_004378356.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328915773|gb|AEB56604.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 579

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 237/604 (39%), Positives = 334/604 (55%), Gaps = 68/604 (11%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            DR++    L    T A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14   DRLTAEGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAKPAGMK 58

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
                 P D+A+ + + + ++        + I K+E+A PGF+N F        Q  D++ 
Sbjct: 59   -----PRDLAEKLIAALPAD--------EQITKVEIAGPGFLNFF--------QNSDVLA 97

Query: 593  NGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 643
              ++    + KL         RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  
Sbjct: 98   QHLEAALADAKLGVRKSGPTQRVVVDMSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDT 157

Query: 644  VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 703
            V+R NHVGDWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA 
Sbjct: 158  VIRQNHVGDWGTQFGMLLAYMQE---NPAAAESELADLEGFYRAAKKRFDESPEFADRAR 214

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPY 760
            + VV LQ  D +  + W    D+S    Q +YDRL V L+    +GES Y   + Q+V  
Sbjct: 215  ELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYNDDLPQVVAD 274

Query: 761  LEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 815
            LE KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD
Sbjct: 275  LEAKGLLTEDNGAQCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRANALKAD 334

Query: 816  WIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKL 875
             ++Y  D  Q +HF+++  CA+ AG + P    M+ +GFG + G D + FKTR G TVKL
Sbjct: 335  RVLYFVDQRQALHFQMVFACARLAGFV-PASMEMEHMGFGTMNGPDGRPFKTRDGGTVKL 393

Query: 876  SELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDK 935
             +LLDE  +R+   +KDKN   EL   EL +  + V    +KYADLS +R  DY F+FD 
Sbjct: 394  VQLLDEAEQRAYSLVKDKN--PELAEDELRQIARVVGIASVKYADLSKHRTSDYSFNFDL 451

Query: 936  MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMN 995
            ML   GNTA YLLYAYTR+ASI R  G   +++        ++L  ++E ALA  L + N
Sbjct: 452  MLSFEGNTAPYLLYAYTRVASIFRKLGKGVDEI-----GGQITLVADQEQALAGKLAQFN 506

Query: 996  DVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAK 1055
            ++L  V      H LC YLYDI+  FS FY+NC  +  + E         RL LA  T +
Sbjct: 507  ELLGNVADKGTPHMLCAYLYDIAGLFSSFYENCPILAAEDE----ATRNSRLRLAALTGR 562

Query: 1056 VMKK 1059
             +K+
Sbjct: 563  TLKQ 566



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/447 (35%), Positives = 229/447 (51%), Gaps = 69/447 (15%)

Query: 83  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           DR++    L    T A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14  DRLTAEGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAKPAGMK 58

Query: 143 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
                P D+A+ + + + ++        + I K+E+A PGF+N F        Q  D++ 
Sbjct: 59  -----PRDLAEKLIAALPAD--------EQITKVEIAGPGFLNFF--------QNSDVLA 97

Query: 203 NGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 253
             ++    + KL         RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  
Sbjct: 98  QHLEAALADAKLGVRKSGPTQRVVVDMSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDT 157

Query: 254 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 313
           V+R NHVGDWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA 
Sbjct: 158 VIRQNHVGDWGTQFGMLLAYMQE---NPAAAESELADLEGFYRAAKKRFDESPEFADRAR 214

Query: 314 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPY 370
           + VV LQ  D +  + W    D+S    Q +YDRL V L+    +GES Y   + Q+V  
Sbjct: 215 ELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYNDDLPQVVAD 274

Query: 371 LEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 425
           LE KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD
Sbjct: 275 LEAKGLLTEDNGAQCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRANALKAD 334

Query: 426 WIVYVTDHRS--YHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVP------VRDRMSV 477
            ++Y  D R   + Q++ A A   +  G   +S          MN P       RD  +V
Sbjct: 335 RVLYFVDQRQALHFQMVFACA---RLAGFVPASMEMEHMGFGTMNGPDGRPFKTRDGGTV 391

Query: 478 RDYLSDVFTHAVQVAFPELGDKTASVA 504
           +  L  +   A Q A+  + DK   +A
Sbjct: 392 K--LVQLLDEAEQRAYSLVKDKNPELA 416



 Score =  230 bits (586), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/369 (37%), Positives = 200/369 (54%), Gaps = 56/369 (15%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            DR++    L    T A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14   DRLTAEGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAKPAGMK 58

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
                 P D+A+ + + + ++        + I K+E+A PGF+N F        Q  D++ 
Sbjct: 59   -----PRDLAEKLIAALPAD--------EQITKVEIAGPGFLNFF--------QNSDVLA 97

Query: 1220 NGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 1270
              ++    + KL         RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  
Sbjct: 98   QHLEAALADAKLGVRKSGPTQRVVVDMSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDT 157

Query: 1271 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 1330
            V+R NHVGDWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA 
Sbjct: 158  VIRQNHVGDWGTQFGMLLAYMQE---NPAAAESELADLEGFYRAAKKRFDESPEFADRAR 214

Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPY 1387
            + VV LQ  D +  + W    D+S    Q +YDRL V L+    +GES Y   + Q+V  
Sbjct: 215  ELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYNDDLPQVVAD 274

Query: 1388 LEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 1442
            LE KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD
Sbjct: 275  LEAKGLLTEDNGAQCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRANALKAD 334

Query: 1443 WIVYVTDHR 1451
             ++Y  D R
Sbjct: 335  RVLYFVDQR 343


>gi|386035526|ref|YP_005955439.1| arginyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
 gi|424831318|ref|ZP_18256046.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            Ecl8]
 gi|339762654|gb|AEJ98874.1| arginyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
 gi|414708752|emb|CCN30456.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            Ecl8]
          Length = 577

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL    + V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELENLAKVVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AGIN      A    PV 
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGINEN----AMIDAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  IAEDREAQLAARLLQFEETLCVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADNVNRALQSERLGVTKP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|37526009|ref|NP_929353.1| arginyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
            TTO1]
 gi|39932033|sp|Q7N565.1|SYR_PHOLL RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|36785439|emb|CAE14385.1| Arginyl-tRNA synthetase (Arginine-tRNA ligase) [Photorhabdus
            luminescens subsp. laumondii TTO1]
          Length = 576

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 234/608 (38%), Positives = 342/608 (56%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSEKVSQALIAA----GAPADSEAHIRQSAKAQFGDYQANGVMAAAKKVG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ + +++        +L  +  K+E+A PGF+N+FL + +    I+  + + 
Sbjct: 53   -MPPRQLAEKVVNLL--------NLQGIASKVEIAGPGFINIFLDKAWIAANIETALKDE 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV P    K   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH V+R NHVG
Sbjct: 104  KLGVTPA---KPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNENASDMALSDLEAFYREAKKHYDEDEEFAIRARGYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W  + D++    Q+ YDRLNVTLT+    GES Y   +  +V  L+++GL  
Sbjct: 220  GDEYCRTMWRKLVDITMAQNQQTYDRLNVTLTKDSVMGESLYNDLLPSIVADLKQQGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I+Y 
Sbjct: 280  ESDGATVVYLDEYKNKEGEPMGVI---IQKQDGGYLYTTTDIACAKYRYETLHADRILYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D K FKTR+G TV+L++LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHMFGMMLGKDSKPFKTRAGGTVRLTDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   +++KN   ++   EL +   AV  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAIERANTLIREKN--PDMPEDELKKVVSAVGIGAVKYADLSKSRTTDYIFDWDNMLAFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ASI + A I+   L     + PV L  ++E  LA  LL+  + +  
Sbjct: 454  GNTAPYMQYAYTRVASIFKRAEIDESSL-----TLPVILNEDREQTLATRLLQFEETITT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  TAK +K+ 
Sbjct: 509  VAREGTPHVMCAYLYDLAGLFSCFYEHCQILNAESE----ELRQSRLKLALLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             + L I T
Sbjct: 565  LNTLGIET 572



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 143/372 (38%), Positives = 208/372 (55%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQAILSEKVSQALIAA----GAPADSEAHIRQSAKAQFGDYQANGVMAAAKKVG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ + +++        +L  +  K+E+A PGF+N+FL + +    I+  + + 
Sbjct: 53  -MPPRQLAEKVVNLL--------NLQGIASKVEIAGPGFINIFLDKAWIAANIETALKDE 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GV P    K   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH V+R NHVG
Sbjct: 104 KLGVTPA---KPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KVQNENASDMALSDLEAFYREAKKHYDEDEEFAIRARGYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W  + D++    Q+ YDRLNVTLT+    GES Y   +  +V  L+++GL  
Sbjct: 220 GDEYCRTMWRKLVDITMAQNQQTYDRLNVTLTKDSVMGESLYNDLLPSIVADLKQQGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I+Y 
Sbjct: 280 ESDGATVVYLDEYKNKEGEPMGVI---IQKQDGGYLYTTTDIACAKYRYETLHADRILYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/371 (38%), Positives = 207/371 (55%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G    S A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSEKVSQALIAA----GAPADSEAHIRQSAKAQFGDYQANGVMAAAKKVG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ + +++        +L  +  K+E+A PGF+N+FL + +    I+  + + 
Sbjct: 53   -MPPRQLAEKVVNLL--------NLQGIASKVEIAGPGFINIFLDKAWIAANIETALKDE 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV P    K   ++VD+S+PN+AK+MHVGHLRSTIIGD   R LE+LGH V+R NHVG
Sbjct: 104  KLGVTPA---KPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNENASDMALSDLEAFYREAKKHYDEDEEFAIRARGYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W  + D++    Q+ YDRLNVTLT+    GES Y   +  +V  L+++GL  
Sbjct: 220  GDEYCRTMWRKLVDITMAQNQQTYDRLNVTLTKDSVMGESLYNDLLPSIVADLKQQGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              DG  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD I+Y 
Sbjct: 280  ESDGATVVYLDEYKNKEGEPMGVI---IQKQDGGYLYTTTDIACAKYRYETLHADRILYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|163802523|ref|ZP_02196415.1| arginyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173606|gb|EDP58425.1| arginyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 577

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/564 (39%), Positives = 323/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +     T +K   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEAFLAKQAEAALADSRLGVTADKAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEEMGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PETVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELAAEEKQAIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++ +DLR       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVSMDDLR-----GEIKVTDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----SVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 194/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +     T +K   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEAFLAKQAEAALADSRLGVTADKAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEEMGADRVLYFIDSRQHQHLMQA 349



 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 193/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +     T +K   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEAFLAKQAEAALADSRLGVTADKAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEEMGADRVLYFIDSRQHQHLMQ 348


>gi|206576111|ref|YP_002237735.1| arginyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288934593|ref|YP_003438652.1| arginyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|238065091|sp|B5XPZ2.1|SYR_KLEP3 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|206565169|gb|ACI06945.1| arginyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288889302|gb|ADC57620.1| arginyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 577

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL    + V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELENLAKVVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AGI+      A    PV 
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDEN----AMNDAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  IAEDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADNVNRALQSERLGVTKP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDQYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  233 bits (593), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|333927734|ref|YP_004501313.1| arginyl-tRNA synthetase [Serratia sp. AS12]
 gi|333932688|ref|YP_004506266.1| arginyl-tRNA synthetase [Serratia plymuthica AS9]
 gi|386329557|ref|YP_006025727.1| arginyl-tRNA synthetase [Serratia sp. AS13]
 gi|333474295|gb|AEF46005.1| Arginyl-tRNA synthetase [Serratia plymuthica AS9]
 gi|333491794|gb|AEF50956.1| Arginyl-tRNA synthetase [Serratia sp. AS12]
 gi|333961890|gb|AEG28663.1| Arginyl-tRNA synthetase [Serratia sp. AS13]
          Length = 576

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/606 (37%), Positives = 342/606 (56%), Gaps = 46/606 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +Q+ D ++N 
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDIASKVEIAGPGFINIFLNGEWVAQQV-DQVLNA 102

Query: 594  ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
               G+ P    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHV
Sbjct: 103  PKLGIAPV---KQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHV 159

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DED  F +RA   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMQNENASDMGLADLEQFYREAKKHYDEDAEFAERARAYVVKLQ 218

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 767
              D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KGL 
Sbjct: 219  GGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 768  ELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
               +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D
Sbjct: 279  VESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYID 338

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G TV+LS+LLDE 
Sbjct: 339  SRQHQHLMQAWTIVRKAGYI-PDSLSLEHHMFGMMLGKDGKPFKTRAGGTVRLSDLLDEA 397

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            + R+   + +KN   ++   E+      V  G +KYADLS +R  DY+F +D ML   GN
Sbjct: 398  IDRAGKLIAEKN--PDMPAEEMQHLANVVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGN 455

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA Y+ YAYTR+AS+ + AG++   L     + P+ +  E+E ALA  LL+  +V+  V 
Sbjct: 456  TAPYMQYAYTRVASVFKRAGLDESSL-----TLPLVMTEEREIALATRLLQFEEVITTVA 510

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
            R+   H +C YLYD++  FS FY++C  +  D+E         RL LA  TA+ +K   D
Sbjct: 511  REGTPHVMCTYLYDLAGLFSGFYEHCQILNADSE----EARQSRLKLALLTARTLKTGLD 566

Query: 1063 ILNIRT 1068
             L I T
Sbjct: 567  TLGIDT 572



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 209/370 (56%), Gaps = 34/370 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +Q+ D ++N 
Sbjct: 53  -MPPRQLAEKVVQLL--------DLGDIASKVEIAGPGFINIFLNGEWVAQQV-DQVLNA 102

Query: 204 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
              G+ P    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHV
Sbjct: 103 PKLGIAPV---KQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHV 159

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DED  F +RA   VV LQ
Sbjct: 160 GDWGTQFGMLIAYLE-KMQNENASDMGLADLEQFYREAKKHYDEDAEFAERARAYVVKLQ 218

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 377
             D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KGL 
Sbjct: 219 GGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 378 ELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
              +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D
Sbjct: 279 VESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYID 338

Query: 433 HRSYHQVLQA 442
            R +  ++QA
Sbjct: 339 SRQHQHLMQA 348



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 208/369 (56%), Gaps = 34/369 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +Q+ D ++N 
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDIASKVEIAGPGFINIFLNGEWVAQQV-DQVLNA 102

Query: 1221 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
               G+ P    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHV
Sbjct: 103  PKLGIAPV---KQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHV 159

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DED  F +RA   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMQNENASDMGLADLEQFYREAKKHYDEDAEFAERARAYVVKLQ 218

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 1394
              D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KGL 
Sbjct: 219  GGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 1395 ELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
               +G  +++    +++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D
Sbjct: 279  VESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYID 338

Query: 1450 HRSYHQVLQ 1458
             R +  ++Q
Sbjct: 339  SRQHQHLMQ 347


>gi|152978766|ref|YP_001344395.1| arginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704277|sp|A6VNB3.1|SYR_ACTSZ RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|150840489|gb|ABR74460.1| arginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 575

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 239/605 (39%), Positives = 354/605 (58%), Gaps = 45/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+   HA+  A    G +  +  +  +    +FGD+Q N  M   K       
Sbjct: 1    MNIQQLLSEKIRHAMIAA----GAQQPAEPAVRQSGKPQFGDYQANGIMGAAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR---VYAGEQIKDII 591
              NP + AQ +          N +L  + +K+E+A PGF+N+FLS+   V   +++   +
Sbjct: 53   -LNPREFAQKVLD--------NLNLDGIAEKLEIAGPGFINIFLSKNWLVCHADEMLSAV 103

Query: 592  VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G++     K   ++VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVG
Sbjct: 104  NFGIKTA---KPQTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +K+ +D DE F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMENENASAMQLSDLEAFYRAAKEHYDNDEAFAEKARNYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D   +  W+ + D++ R  Q+ YDRLNVTLTE+   GES Y   + ++V  L+K+GL  
Sbjct: 220  GDEYCRIMWKKLVDITMRHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKKQGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA + R  +  AD ++  +D 
Sbjct: 280  EDDGALVVYLDEFKNKDGDPMGVIVQKKDGGYLYTTTDIAAAKYRCHKLHADRVLVFSDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTR+G TVKL +LLDE +
Sbjct: 340  RQSQHMQQAWLITRKAGYV-PDSFSLEHPFFGMMLGKDGKPFKTRTGGTVKLKDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+ DKL  + R+ +LT  E +   +AVA G +KY+DLS NR  DYVF +D ML   GNT
Sbjct: 399  ERA-DKLIAE-RNPDLTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNMLTFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTRI SI   AGI    L     +  + L  +KE  L   LL+  + L  V +
Sbjct: 457  APYMQYAYTRIRSIFARAGIEPNSL-----NDDIVLTDDKERVLVIKLLQFEEALNGVAK 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   H LC+YLY+++  FS FY+ C  +  +AE  IK     RL LA   AK +K+  D+
Sbjct: 512  DGMPHILCQYLYELAGMFSAFYEACPIL--NAERPIK---NSRLKLAALAAKTLKQGLDL 566

Query: 1064 LNIRT 1068
            L I+T
Sbjct: 567  LGIKT 571



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/369 (37%), Positives = 216/369 (58%), Gaps = 32/369 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+   HA+  A    G +  +  +  +    +FGD+Q N  M   K       
Sbjct: 1   MNIQQLLSEKIRHAMIAA----GAQQPAEPAVRQSGKPQFGDYQANGIMGAAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR---VYAGEQIKDII 201
             NP + AQ +          N +L  + +K+E+A PGF+N+FLS+   V   +++   +
Sbjct: 53  -LNPREFAQKVLD--------NLNLDGIAEKLEIAGPGFINIFLSKNWLVCHADEMLSAV 103

Query: 202 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G++     K   ++VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVG
Sbjct: 104 NFGIKTA---KPQTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +K+ +D DE F ++A   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KMENENASAMQLSDLEAFYRAAKEHYDNDEAFAEKARNYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D   +  W+ + D++ R  Q+ YDRLNVTLTE+   GES Y   + ++V  L+K+GL  
Sbjct: 220 GDEYCRIMWKKLVDITMRHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKKQGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA + R  +  AD ++  +D 
Sbjct: 280 EDDGALVVYLDEFKNKDGDPMGVIVQKKDGGYLYTTTDIAAAKYRCHKLHADRVLVFSDS 339

Query: 434 RSYHQVLQA 442
           R    + QA
Sbjct: 340 RQSQHMQQA 348



 Score =  237 bits (604), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/368 (37%), Positives = 215/368 (58%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+   HA+  A    G +  +  +  +    +FGD+Q N  M   K       
Sbjct: 1    MNIQQLLSEKIRHAMIAA----GAQQPAEPAVRQSGKPQFGDYQANGIMGAAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR---VYAGEQIKDII 1218
              NP + AQ +          N +L  + +K+E+A PGF+N+FLS+   V   +++   +
Sbjct: 53   -LNPREFAQKVLD--------NLNLDGIAEKLEIAGPGFINIFLSKNWLVCHADEMLSAV 103

Query: 1219 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G++     K   ++VD+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVG
Sbjct: 104  NFGIKTA---KPQTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +K+ +D DE F ++A   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KMENENASAMQLSDLEAFYRAAKEHYDNDEAFAEKARNYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D   +  W+ + D++ R  Q+ YDRLNVTLTE+   GES Y   + ++V  L+K+GL  
Sbjct: 220  GDEYCRIMWKKLVDITMRHNQENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKKQGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             DDG  +++ +   ++   PM ++  K DGG+ Y T+D+AA + R  +  AD ++  +D 
Sbjct: 280  EDDGALVVYLDEFKNKDGDPMGVIVQKKDGGYLYTTTDIAAAKYRCHKLHADRVLVFSDS 339

Query: 1451 RSYHQVLQ 1458
            R    + Q
Sbjct: 340  RQSQHMQQ 347


>gi|37679228|ref|NP_933837.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|39932019|sp|Q7MMM3.1|SYR_VIBVY RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|37197971|dbj|BAC93808.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 577

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/602 (38%), Positives = 339/602 (56%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  ++D  + A++ A    G  T S A+  +    +FGD+Q N  M + K       
Sbjct: 1    MNIQALINDKVSQALEAA----GAPTGSPAAVRQSAKPQFGDYQANGVMGVAKQLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ +  V+         L  +  K E+A PGF+N+FLS  +  +Q +  + + 
Sbjct: 53   -TNPREFAQKVLDVL--------DLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADP 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                   +   ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+GDWG
Sbjct: 104  RLGVASEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+    +    S  +ADL+ FY+ESKK +DEDE F  +A   VV LQ  D 
Sbjct: 164  TQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKARGYVVKLQSGDE 223

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 771
               + W+ + DV+    Q+ YDRLNV+L+     GES Y   + ++V  L+ +GL   DD
Sbjct: 224  FCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQGLAVEDD 283

Query: 772  GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G ++++ E   ++   PM ++  K DGGF Y T+D+A  + R EE  AD ++Y  D  Q 
Sbjct: 284  GAQVVFLEEFKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQH 343

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H        +KAG + P    ++   FG++LG+D K FKTR+G TV+L++LLDE   R+
Sbjct: 344  QHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKPFKTRAGGTVRLADLLDEAEVRA 402

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               ++ KN   EL   E       VA   +KYADLS +R  DYVF +D ML   GNTA Y
Sbjct: 403  AQLIESKN--PELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPY 460

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTR+AS+   AG++ +DL+       + +  EKE AL   L++  + +  V R+  
Sbjct: 461  MQYAYTRVASVFAKAGVSMDDLQ-----GEIKITDEKEKALIAKLMQFEEAVQSVAREGQ 515

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H +C YL++++  FS FY+ C  +  + E     V   RL LA  TAK +K+   +L I
Sbjct: 516  PHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQSRLKLAALTAKTIKQGLSLLGI 571

Query: 1067 RT 1068
             T
Sbjct: 572  DT 573



 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 140/366 (38%), Positives = 211/366 (57%), Gaps = 25/366 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  ++D  + A++ A    G  T S A+  +    +FGD+Q N  M + K       
Sbjct: 1   MNIQALINDKVSQALEAA----GAPTGSPAAVRQSAKPQFGDYQANGVMGVAKQLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ +  V+         L  +  K E+A PGF+N+FLS  +  +Q +  + + 
Sbjct: 53  -TNPREFAQKVLDVL--------DLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADP 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                  +   ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+GDWG
Sbjct: 104 RLGVASEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+    +    S  +ADL+ FY+ESKK +DEDE F  +A   VV LQ  D 
Sbjct: 164 TQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKARGYVVKLQSGDE 223

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 381
              + W+ + DV+    Q+ YDRLNV+L+     GES Y   + ++V  L+ +GL   DD
Sbjct: 224 FCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQGLAVEDD 283

Query: 382 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G ++++ E   ++   PM ++  K DGGF Y T+D+A  + R EE  AD ++Y  D R +
Sbjct: 284 GAQVVFLEEFKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQH 343

Query: 437 HQVLQA 442
             ++QA
Sbjct: 344 QHLMQA 349



 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/365 (38%), Positives = 210/365 (57%), Gaps = 25/365 (6%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  ++D  + A++ A    G  T S A+  +    +FGD+Q N  M + K       
Sbjct: 1    MNIQALINDKVSQALEAA----GAPTGSPAAVRQSAKPQFGDYQANGVMGVAKQLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ +  V+         L  +  K E+A PGF+N+FLS  +  +Q +  + + 
Sbjct: 53   -TNPREFAQKVLDVL--------DLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADP 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                   +   ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+GDWG
Sbjct: 104  RLGVASEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+    +    S  +ADL+ FY+ESKK +DEDE F  +A   VV LQ  D 
Sbjct: 164  TQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKARGYVVKLQSGDE 223

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 1398
               + W+ + DV+    Q+ YDRLNV+L+     GES Y   + ++V  L+ +GL   DD
Sbjct: 224  FCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQGLAVEDD 283

Query: 1399 GRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G ++++ E   ++   PM ++  K DGGF Y T+D+A  + R EE  AD ++Y  D R +
Sbjct: 284  GAQVVFLEEFKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQH 343

Query: 1454 HQVLQ 1458
              ++Q
Sbjct: 344  QHLMQ 348


>gi|423124541|ref|ZP_17112220.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
 gi|376399986|gb|EHT12599.1| arginyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
          Length = 577

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 321/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYENLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A  +   L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADTDESALAAA----PVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  ITEDREAQLAARLLQFEETLTVVAREGTPHVMCSYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 190/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYENLHADRVLYYIDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVSSALKSERLGVAQPQAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYENLHADRVLYYIDSRQHQHLMQ 347


>gi|417390337|ref|ZP_12153851.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Minnesota str. A4-603]
 gi|353619050|gb|EHC69565.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Minnesota str. A4-603]
          Length = 533

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/533 (41%), Positives = 317/533 (59%), Gaps = 30/533 (5%)

Query: 549  VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 605
            +  ++ T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  
Sbjct: 14   LAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPT---RQT 70

Query: 606  VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 665
            ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 71   IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLE 130

Query: 666  DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 725
             +  +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 131  KQQQEN-AGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVD 189

Query: 726  VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--- 779
            ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   
Sbjct: 190  ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 249

Query: 780  DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAK 837
            ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D  Q  H        +
Sbjct: 250  NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVR 309

Query: 838  KAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT 897
            KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE L R+   + +KN   
Sbjct: 310  KAGYV-PDSVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--P 366

Query: 898  ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI 957
            ++   EL +   AV  G +KYADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+
Sbjct: 367  DMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSV 426

Query: 958  ARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017
             R A I+ + L     S PV +  ++E  LA  LL+  + L +V R+   H +C YLYD+
Sbjct: 427  FRKADIDEQAL----ASAPVIISEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDV 482

Query: 1018 STAFSEFYDNCYCI--EKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +  FS FY++C  +  E DA      V   RL LA+ TAK +K   D L I T
Sbjct: 483  AGLFSGFYEHCPILSAENDA------VRNSRLKLAQLTAKTLKLGLDTLGIET 529



 Score =  233 bits (593), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 122/295 (41%), Positives = 182/295 (61%), Gaps = 15/295 (5%)

Query: 159 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 215
           +  ++ T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  
Sbjct: 14  LAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPT---RQT 70

Query: 216 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 275
           ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 71  IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLE 130

Query: 276 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 335
            +  +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 131 KQQQEN-AGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVD 189

Query: 336 VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--- 389
           ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   
Sbjct: 190 ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 249

Query: 390 DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 250 NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 304



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/294 (41%), Positives = 181/294 (61%), Gaps = 15/294 (5%)

Query: 1176 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 1232
            +  ++ T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  
Sbjct: 14   LAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPT---RQT 70

Query: 1233 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 1292
            ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 71   IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLE 130

Query: 1293 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 1352
             +  +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 131  KQQQEN-AGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVD 189

Query: 1353 VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--- 1406
            ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   
Sbjct: 190  ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 249

Query: 1407 DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 250  NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 303


>gi|290508794|ref|ZP_06548165.1| arginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289778188|gb|EFD86185.1| arginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 577

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +  ++   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENASEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL    + V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELENLAKVVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AGI+      A    PV 
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDEN----AMIDAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  IAEDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +  ++   +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENASEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDQYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +  ++   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENASEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|417957775|ref|ZP_12600694.1| arginine--tRNA ligase [Neisseria weaveri ATCC 51223]
 gi|343967839|gb|EGV36079.1| arginine--tRNA ligase [Neisseria weaveri ATCC 51223]
          Length = 578

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/567 (40%), Positives = 329/567 (58%), Gaps = 45/567 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGDFQ N  M   K       K+NP ++AQ++A+ ++         + VI+  EVA PGF
Sbjct: 41   FGDFQINGVMGAAK-----QAKQNPRELAQTVAAALSG--------SSVIESAEVAGPGF 87

Query: 574  VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 630
            +N+ L   +  E I+  + +   GV+    ++   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 88   INLRLHADFLAENIQTALNDSRFGVKETAQSQT--VVIDYSSPNLAKEMHVGHLRSSIIG 145

Query: 631  DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL-QDKFPDYLTKSPPIADLQAFYKESK 689
            D+I+R+L Y+GH VV  NHVGDWGTQFGML+A++ + +  D   K   +ADL+ FY+ +K
Sbjct: 146  DSIARVLAYMGHRVVAQNHVGDWGTQFGMLVAYMVEQQKADAEFK---LADLEQFYRNAK 202

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
             RFDEDE F   + + VV LQ  D      W+   ++S    Q +YD L + LT     G
Sbjct: 203  VRFDEDEAFADTSREYVVKLQGGDEAVLALWKQFVEISLSHAQNVYDTLGLKLTPEDVAG 262

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSD 801
            ES Y   ++ ++  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++D
Sbjct: 263  ESMYNDDLQPVIDELSEKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKKGGGFLYSSTD 322

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LA +R R+    AD ++YV D  Q +HF+ +   A+KAG L P +   + + FG ++G+D
Sbjct: 323  LACVRYRVGRLNADRLLYVVDARQALHFQQMFTVARKAGWL-PEQVAAEHIAFGTMMGKD 381

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSGDTVKL ELLDE   R+   +K KN   +L+  E +   + V  G +KYADL
Sbjct: 382  GKPFKTRSGDTVKLVELLDEAQERATALVKAKN--PDLSGEEAANIGKTVGIGAVKYADL 439

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA YL YAYTR+ S+ + AG  + D        P+ L  
Sbjct: 440  SKNRTSDYVFDWDSMLSFEGNTAPYLQYAYTRVQSVFKKAGEWNAD-------APLQLNE 492

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
              E  LA  LL+  DVL  V      H+L  YLY ++T FS FY+ C  ++  AEG ++ 
Sbjct: 493  PLEKQLAVELLKFEDVLQSVAETSYPHYLAAYLYQVATLFSRFYEACPILK--AEGGVRN 550

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA+ T  ++K+  ++L I T
Sbjct: 551  T---RLQLAKLTGGILKQGLELLGIET 574



 Score =  223 bits (567), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 130/323 (40%), Positives = 190/323 (58%), Gaps = 30/323 (9%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGDFQ N  M   K       K+NP ++AQ++A+ ++         + VI+  EVA PGF
Sbjct: 41  FGDFQINGVMGAAK-----QAKQNPRELAQTVAAALSG--------SSVIESAEVAGPGF 87

Query: 184 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           +N+ L   +  E I+  + +   GV+    ++   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 88  INLRLHADFLAENIQTALNDSRFGVKETAQSQT--VVIDYSSPNLAKEMHVGHLRSSIIG 145

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL-QDKFPDYLTKSPPIADLQAFYKESK 299
           D+I+R+L Y+GH VV  NHVGDWGTQFGML+A++ + +  D   K   +ADL+ FY+ +K
Sbjct: 146 DSIARVLAYMGHRVVAQNHVGDWGTQFGMLVAYMVEQQKADAEFK---LADLEQFYRNAK 202

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
            RFDEDE F   + + VV LQ  D      W+   ++S    Q +YD L + LT     G
Sbjct: 203 VRFDEDEAFADTSREYVVKLQGGDEAVLALWKQFVEISLSHAQNVYDTLGLKLTPEDVAG 262

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSD 411
           ES Y   ++ ++  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++D
Sbjct: 263 ESMYNDDLQPVIDELSEKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKKGGGFLYSSTD 322

Query: 412 LAAIRQRIEEEKADWIVYVTDHR 434
           LA +R R+    AD ++YV D R
Sbjct: 323 LACVRYRVGRLNADRLLYVVDAR 345



 Score =  223 bits (567), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 130/323 (40%), Positives = 190/323 (58%), Gaps = 30/323 (9%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGDFQ N  M   K       K+NP ++AQ++A+ ++         + VI+  EVA PGF
Sbjct: 41   FGDFQINGVMGAAK-----QAKQNPRELAQTVAAALSG--------SSVIESAEVAGPGF 87

Query: 1201 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            +N+ L   +  E I+  + +   GV+    ++   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 88   INLRLHADFLAENIQTALNDSRFGVKETAQSQT--VVIDYSSPNLAKEMHVGHLRSSIIG 145

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHL-QDKFPDYLTKSPPIADLQAFYKESK 1316
            D+I+R+L Y+GH VV  NHVGDWGTQFGML+A++ + +  D   K   +ADL+ FY+ +K
Sbjct: 146  DSIARVLAYMGHRVVAQNHVGDWGTQFGMLVAYMVEQQKADAEFK---LADLEQFYRNAK 202

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
             RFDEDE F   + + VV LQ  D      W+   ++S    Q +YD L + LT     G
Sbjct: 203  VRFDEDEAFADTSREYVVKLQGGDEAVLALWKQFVEISLSHAQNVYDTLGLKLTPEDVAG 262

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSD 1428
            ES Y   ++ ++  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++D
Sbjct: 263  ESMYNDDLQPVIDELSEKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKKGGGFLYSSTD 322

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LA +R R+    AD ++YV D R
Sbjct: 323  LACVRYRVGRLNADRLLYVVDAR 345


>gi|124805963|ref|XP_001350588.1| arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23496712|gb|AAN36268.1|AE014846_67 arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 590

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/600 (36%), Positives = 344/600 (57%), Gaps = 44/600 (7%)

Query: 484  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 543
            +F +++Q  FP + +  A V   N     KFG +QCN+A+    I+K  G++ N ++ AQ
Sbjct: 14   IFQNSIQKCFPSISED-AIVTYAN----LKFGHYQCNNAI---NIYKKYGKELN-YENAQ 64

Query: 544  SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKK 603
             I+  + S +        + ++I+ +  GF+ V LS+ Y    +K +  NG +       
Sbjct: 65   KISEFIISNIN-----ETIFEEIKSSPQGFITVKLSKDYIETSLKKLF-NGEKIDISINI 118

Query: 604  L----------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
                        VLVDFSSPNIAKEMHVGHLRSTIIGD+I R+ E+L  +  R+NHVGDW
Sbjct: 119  NDIKESNENYGNVLVDFSSPNIAKEMHVGHLRSTIIGDSICRVFEFLKINTHRVNHVGDW 178

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGM+I +++  +P++  + P +++L + Y+ESKK +D D+ F+K + +  + LQ  D
Sbjct: 179  GTQFGMIINYIKTHYPNFKEEMPDLSNLTSLYQESKKMYDADKEFEKSSKENAIKLQNND 238

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
             D K  W  +C+ S+++F K+Y+ L++ L   GESFY   +  ++  L++  LL  + G 
Sbjct: 239  EDCKFVWNKLCESSKKEFDKLYNILDIKLEYVGESFYVPMLSTVLDLLKESKLLT-NIGD 297

Query: 774  KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLE 833
             I +  +   +P+ + KS+GG+ YD++D+AA+  R+ +   + ++YVTD+GQ  HF  + 
Sbjct: 298  AICYQSENFKVPLFLQKSNGGYGYDSTDVAALYYRLTQLNCNCVIYVTDIGQLTHFETIF 357

Query: 834  ECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL--- 890
            +  KK    + N   M  VGFG VL ED KKFKTRSG TVKL  L+ EG  R+   L   
Sbjct: 358  DLIKKTNWGDKNAKLMH-VGFGFVLNEDNKKFKTRSGTTVKLINLIKEGTERAKRDLLQR 416

Query: 891  ---KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
               K +   +     ++ +  +++    IKY DL  +RN DY FS+D ML+ +GNT +Y+
Sbjct: 417  IETKSEEEKSYFENVDIDQLSESLCVSAIKYFDLKQHRNSDYKFSYDNMLNVKGNTGIYI 476

Query: 948  LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
            +Y Y+RI SI R + IN ED+        +SL    E  L   +L+  D+   + +++ +
Sbjct: 477  IYGYSRICSIFRKSTINVEDI----SKDELSLTSIYEINLGLHILKFPDIFYYILKNMLV 532

Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            H L EY+YD++T F+ FY+NC  +  + E         RLLL   T  ++K C ++L ++
Sbjct: 533  HKLAEYMYDLTTTFTAFYENCKVLNNENE-------KSRLLLCSITKSLLKLCMELLGMK 585



 Score =  232 bits (592), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 208/349 (59%), Gaps = 26/349 (7%)

Query: 94  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 153
           +F +++Q  FP + +  A V   N     KFG +QCN+A+    I+K  G++ N ++ AQ
Sbjct: 14  IFQNSIQKCFPSISED-AIVTYAN----LKFGHYQCNNAI---NIYKKYGKELN-YENAQ 64

Query: 154 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKK 213
            I+  + S +        + ++I+ +  GF+ V LS+ Y    +K +  NG +       
Sbjct: 65  KISEFIISNIN-----ETIFEEIKSSPQGFITVKLSKDYIETSLKKLF-NGEKIDISINI 118

Query: 214 L----------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
                       VLVDFSSPNIAKEMHVGHLRSTIIGD+I R+ E+L  +  R+NHVGDW
Sbjct: 119 NDIKESNENYGNVLVDFSSPNIAKEMHVGHLRSTIIGDSICRVFEFLKINTHRVNHVGDW 178

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           GTQFGM+I +++  +P++  + P +++L + Y+ESKK +D D+ F+K + +  + LQ  D
Sbjct: 179 GTQFGMIINYIKTHYPNFKEEMPDLSNLTSLYQESKKMYDADKEFEKSSKENAIKLQNND 238

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
            D K  W  +C+ S+++F K+Y+ L++ L   GESFY   +  ++  L++  LL  + G 
Sbjct: 239 EDCKFVWNKLCESSKKEFDKLYNILDIKLEYVGESFYVPMLSTVLDLLKESKLLT-NIGD 297

Query: 384 KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            I +  +   +P+ + KS+GG+ YD++D+AA+  R+ +   + ++YVTD
Sbjct: 298 AICYQSENFKVPLFLQKSNGGYGYDSTDVAALYYRLTQLNCNCVIYVTD 346



 Score =  232 bits (592), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 208/349 (59%), Gaps = 26/349 (7%)

Query: 1111 VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 1170
            +F +++Q  FP + +  A V   N     KFG +QCN+A+    I+K  G++ N ++ AQ
Sbjct: 14   IFQNSIQKCFPSISED-AIVTYAN----LKFGHYQCNNAI---NIYKKYGKELN-YENAQ 64

Query: 1171 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKK 1230
             I+  + S +        + ++I+ +  GF+ V LS+ Y    +K +  NG +       
Sbjct: 65   KISEFIISNIN-----ETIFEEIKSSPQGFITVKLSKDYIETSLKKLF-NGEKIDISINI 118

Query: 1231 L----------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
                        VLVDFSSPNIAKEMHVGHLRSTIIGD+I R+ E+L  +  R+NHVGDW
Sbjct: 119  NDIKESNENYGNVLVDFSSPNIAKEMHVGHLRSTIIGDSICRVFEFLKINTHRVNHVGDW 178

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            GTQFGM+I +++  +P++  + P +++L + Y+ESKK +D D+ F+K + +  + LQ  D
Sbjct: 179  GTQFGMIINYIKTHYPNFKEEMPDLSNLTSLYQESKKMYDADKEFEKSSKENAIKLQNND 238

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
             D K  W  +C+ S+++F K+Y+ L++ L   GESFY   +  ++  L++  LL  + G 
Sbjct: 239  EDCKFVWNKLCESSKKEFDKLYNILDIKLEYVGESFYVPMLSTVLDLLKESKLLT-NIGD 297

Query: 1401 KIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             I +  +   +P+ + KS+GG+ YD++D+AA+  R+ +   + ++YVTD
Sbjct: 298  AICYQSENFKVPLFLQKSNGGYGYDSTDVAALYYRLTQLNCNCVIYVTD 346


>gi|336251051|ref|YP_004594761.1| arginyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
 gi|334737107|gb|AEG99482.1| arginyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
          Length = 577

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLELNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNLALQSERLGVAKP---QPQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHRVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KG+    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGMAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI+   L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDESALAAA----PVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  ISEDREAQLAARLLQFEETLAVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --EARNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLELNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADNVNLALQSERLGVAKP---QPQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHRVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KG+    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGMAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  231 bits (589), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLELNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNLALQSERLGVAKP---QPQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHRVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KG+    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGMAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|418824090|ref|ZP_13379472.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 22462]
 gi|392824939|gb|EJA80701.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Newport str. CVM 22462]
          Length = 531

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/533 (41%), Positives = 317/533 (59%), Gaps = 30/533 (5%)

Query: 549  VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 605
            +  ++ T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  
Sbjct: 12   LAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPT---RQT 68

Query: 606  VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 665
            ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 69   IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLE 128

Query: 666  DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 725
             +  +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 129  KQQQEN-AGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVD 187

Query: 726  VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--- 779
            ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   
Sbjct: 188  ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 247

Query: 780  DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAK 837
            ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D  Q  H        +
Sbjct: 248  NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVR 307

Query: 838  KAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT 897
            KAG + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE L R+   + +KN   
Sbjct: 308  KAGYV-PDSVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--P 364

Query: 898  ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI 957
            ++   EL +   AV  G +KYADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+
Sbjct: 365  DMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSV 424

Query: 958  ARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017
             R A I+ +    A  S PV +  ++E  LA  LL+  + L +V R+   H +C YLYD+
Sbjct: 425  FRKADIDEQ----ALASAPVIISEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDV 480

Query: 1018 STAFSEFYDNCYCI--EKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +  FS FY++C  +  E DA      V   RL LA+ TAK +K   D L I T
Sbjct: 481  AGLFSGFYEHCPILSAENDA------VRNSRLKLAQLTAKTLKLGLDTLGIET 527



 Score =  233 bits (593), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 122/295 (41%), Positives = 182/295 (61%), Gaps = 15/295 (5%)

Query: 159 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 215
           +  ++ T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  
Sbjct: 12  LAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPT---RQT 68

Query: 216 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 275
           ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 69  IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLE 128

Query: 276 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 335
            +  +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 129 KQQQEN-AGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVD 187

Query: 336 VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--- 389
           ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   
Sbjct: 188 ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 247

Query: 390 DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 248 NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 302



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/294 (41%), Positives = 181/294 (61%), Gaps = 15/294 (5%)

Query: 1176 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 1232
            +  ++ T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  
Sbjct: 12   LAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPT---RQT 68

Query: 1233 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 1292
            ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 69   IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLE 128

Query: 1293 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 1352
             +  +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 129  KQQQEN-AGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVD 187

Query: 1353 VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE--- 1406
            ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   
Sbjct: 188  ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 247

Query: 1407 DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 248  NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 301


>gi|419958419|ref|ZP_14474483.1| arginyl-tRNA ligase [Enterobacter cloacae subsp. cloacae GS1]
 gi|388606677|gb|EIM35883.1| arginyl-tRNA ligase [Enterobacter cloacae subsp. cloacae GS1]
          Length = 577

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/567 (40%), Positives = 324/567 (57%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVAQPEAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ K L    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I   D  V A +T VS+  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANI---DESVLANAT-VSITE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLSVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEA---- 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRHSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/331 (39%), Positives = 189/331 (57%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLASHVDAALKSDRLGVAQPEAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ K L    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 188/330 (56%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    +   + +   GV  P       V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVAQPEAQT---VVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ K L    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|444350814|ref|YP_007386958.1| Arginyl-tRNA synthetase (EC 6.1.1.19) [Enterobacter aerogenes
            EA1509E]
 gi|443901644|emb|CCG29418.1| Arginyl-tRNA synthetase (EC 6.1.1.19) [Enterobacter aerogenes
            EA1509E]
          Length = 577

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNLALQSERLGVAKP---QPQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHRVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KG+    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGMAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI+   L  A    PV 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDESALAAA----PVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  ISEDREAQLAARLLQFEETLAVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --EARNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADNVNLALQSERLGVAKP---QPQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHRVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KG+    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGMAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  231 bits (589), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNLALQSERLGVAKP---QPQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHRVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KG+    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGMAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|149191128|ref|ZP_01869387.1| arginyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835056|gb|EDL52034.1| arginyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 577

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 330/564 (58%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q  + + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADEALTDARLGVASQEQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DED  F +RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDAEFAERARGYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVQDLKEKGLAVEDDGAQVVFLDEYKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H +      +KAG + P  T ++   FG++LG+D + 
Sbjct: 322  AKYRYEKLGADRVLYFIDSRQHQHLQQAWTIVRKAGYV-PESTSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE + R+   ++ KN   EL   E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAVERATALIESKN--PELDAEEKANIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L     S  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVSMDEL-----SGDIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 494  KALVAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILIAEDE----SVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +++  ++L I T
Sbjct: 550  SRLKLAALTAKTIQQGLELLGIET 573



 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 154/415 (37%), Positives = 227/415 (54%), Gaps = 34/415 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q  + + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADEALTDARLGVASQEQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DED  F +RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDAEFAERARGYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPGIVQDLKEKGLAVEDDGAQVVFLDEYKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM----NVP 470
            + R E+  AD ++Y  D R  HQ LQ      +K G    S+S        M      P
Sbjct: 322 AKYRYEKLGADRVLYFIDSRQ-HQHLQQAWTIVRKAGYVPESTSLEHHAFGMMLGKDGRP 380

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PEL-GDKTASVASTNEKYVHKFGDF 517
            + R      L+D+   AV+ A        PEL  ++ A++A+T      K+ D 
Sbjct: 381 FKTRAGGTVRLADLLDEAVERATALIESKNPELDAEEKANIANTVAMAAVKYADL 435



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 195/327 (59%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q  + + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADEALTDARLGVASQEQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DED  F +RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDAEFAERARGYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVQDLKEKGLAVEDDGAQVVFLDEYKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E+  AD ++Y  D R  HQ LQ
Sbjct: 322  AKYRYEKLGADRVLYFIDSRQ-HQHLQ 347


>gi|365107588|ref|ZP_09335915.1| arginyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
 gi|363641287|gb|EHL80687.1| arginyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
          Length = 577

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L     +  V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESAL----ANAQVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  ISEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA+ TAK +K   D L I T
Sbjct: 546  --EIRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 192/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|424932744|ref|ZP_18351116.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Klebsiella
            pneumoniae subsp. pneumoniae KpQ3]
 gi|407806931|gb|EKF78182.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Klebsiella
            pneumoniae subsp. pneumoniae KpQ3]
          Length = 577

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P +     ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKPQVQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL    + V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELENLAKVVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AGI+      A    PV 
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDEN----AMIDAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  IAEDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P +     ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADNVNRALQSERLGVTKPQVQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P +     ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKPQVQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|422008556|ref|ZP_16355540.1| arginyl-tRNA ligase [Providencia rettgeri Dmel1]
 gi|414095029|gb|EKT56692.1| arginyl-tRNA ligase [Providencia rettgeri Dmel1]
          Length = 576

 Score =  389 bits (998), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 229/605 (37%), Positives = 340/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMLAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+        +L  +  L  +  K+E+A PGF+N+FL   +  + +++ + + 
Sbjct: 53   -MAPRQLAE--------QLVNHLDLEGIASKVEIAGPGFINIFLEPTWVEKHVEEALASQ 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGIAPV---KSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDATDMALADLEEFYREAKKHYDEDEEFAVRARGYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   ++ W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTR+G TV+LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMALEHHMFGMMLGKDGKPFKTRTGGTVRLSDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +++KN   ++   EL      V  G +KYADLS NR  DY+F +D ML   GNT
Sbjct: 399  ERAQALIREKN--PDMPEDELLNVANVVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+ASI + A +   DL     + P+SL+  +E ALA  LL+  + ++ V R
Sbjct: 457  APYMQYAYTRVASIFKKANLTHADL-----TLPISLQDPREIALATRLLQFEETILTVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   H +C YLY+++  FS FY++C  +  D E + ++    RL LA  T + +K   D 
Sbjct: 512  DGTPHVMCAYLYELAGLFSGFYEHCPILSADDEAQRQS----RLKLAALTQRTLKTGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIET 572



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/369 (36%), Positives = 206/369 (55%), Gaps = 32/369 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAILSDKISAAMLAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+        +L  +  L  +  K+E+A PGF+N+FL   +  + +++ + + 
Sbjct: 53  -MAPRQLAE--------QLVNHLDLEGIASKVEIAGPGFINIFLEPTWVEKHVEEALASQ 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104 RLGIAPV---KSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KVQNEDATDMALADLEEFYREAKKHYDEDEEFAVRARGYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   ++ W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRQMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280 ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 434 RSYHQVLQA 442
           R +  ++QA
Sbjct: 340 RQHQHLMQA 348



 Score =  229 bits (584), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 205/368 (55%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMLAA----GAPEGSDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+        +L  +  L  +  K+E+A PGF+N+FL   +  + +++ + + 
Sbjct: 53   -MAPRQLAE--------QLVNHLDLEGIASKVEIAGPGFINIFLEPTWVEKHVEEALASQ 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGIAPV---KSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDATDMALADLEEFYREAKKHYDEDEEFAVRARGYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   ++ W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|157371031|ref|YP_001479020.1| arginyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166987305|sp|A8GFK2.1|SYR_SERP5 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|157322795|gb|ABV41892.1| arginyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 576

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 232/609 (38%), Positives = 338/609 (55%), Gaps = 52/609 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P  +A+ +  ++         L  V  K+E+A PGF+N+FL+  +  +Q   ++   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDVASKVEIAGPGFINIFLNSQWVAQQADRVL--- 100

Query: 595  VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
               P L+    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHV
Sbjct: 101  -SAPKLDIAPVKQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHV 159

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDADFAERARAYVVKLQ 218

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 767
              D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KGL 
Sbjct: 219  GGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 768  ELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
               +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y
Sbjct: 279  VESEGATVVFLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLY 335

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
              D  Q  H        +KAG + P+   ++   FG++LG+D K FKTRSG TVKLS+LL
Sbjct: 336  YIDSRQHQHLMQAWTIVRKAGYI-PDSLSLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLL 394

Query: 880  DEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDD 939
            DE + R+   + +KN   ++   E+     AV  G +KYADLS +R  DY+F +D ML  
Sbjct: 395  DEAVDRAGKLIAEKN--PDMPAEEMQSLANAVGIGAVKYADLSKSRTTDYIFDWDNMLAF 452

Query: 940  RGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLM 999
             GNTA Y+ YAYTR+AS+ + AG++  +L     + P+ +  E+E  LA  LL+  +V+ 
Sbjct: 453  EGNTAPYMQYAYTRVASVFKRAGVDESNL-----TLPLVMTEEREITLATRLLQFEEVIT 507

Query: 1000 LVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
             V R+   H +C YLYD++  FS FY++C  +  D+E         RL L+  TAK +K 
Sbjct: 508  TVAREGTPHVMCSYLYDLAGLFSGFYEHCQILNADSE----EARQSRLKLSLLTAKTLKV 563

Query: 1060 CFDILNIRT 1068
              D L I T
Sbjct: 564  GLDTLGIET 572



 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/373 (37%), Positives = 204/373 (54%), Gaps = 40/373 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P  +A+ +  ++         L  V  K+E+A PGF+N+FL+  +  +Q   ++   
Sbjct: 53  -MPPRQLAEKVVQLL--------DLGDVASKVEIAGPGFINIFLNSQWVAQQADRVL--- 100

Query: 205 VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
              P L+    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHV
Sbjct: 101 -SAPKLDIAPVKQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHV 159

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV LQ
Sbjct: 160 GDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDADFAERARAYVVKLQ 218

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 377
             D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KGL 
Sbjct: 219 GGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 378 ELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 429
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y
Sbjct: 279 VESEGATVVFLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLY 335

Query: 430 VTDHRSYHQVLQA 442
             D R +  ++QA
Sbjct: 336 YIDSRQHQHLMQA 348



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 203/372 (54%), Gaps = 40/372 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQVLLSDKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P  +A+ +  ++         L  V  K+E+A PGF+N+FL+  +  +Q   ++   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDVASKVEIAGPGFINIFLNSQWVAQQADRVL--- 100

Query: 1222 VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
               P L+    K+  +++D+S+PN+AKEMHVGHLRSTIIGD  +R  E+LGH V+R NHV
Sbjct: 101  -SAPKLDIAPVKQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHV 159

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV LQ
Sbjct: 160  GDWGTQFGMLIAYLE-KMQNENASDMGLSDLEQFYREAKKHYDEDADFAERARAYVVKLQ 218

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 1394
              D    K W  + D++    Q  Y+RLNVTLTE    GES Y   +  +V  L+ KGL 
Sbjct: 219  GGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 1395 ELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 1446
               +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y
Sbjct: 279  VESEGATVVFLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRVLY 335

Query: 1447 VTDHRSYHQVLQ 1458
              D R +  ++Q
Sbjct: 336  YIDSRQHQHLMQ 347


>gi|392553279|ref|ZP_10300416.1| arginyl-tRNA ligase [Pseudoalteromonas spongiae UST010723-006]
          Length = 580

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/607 (39%), Positives = 344/607 (56%), Gaps = 48/607 (7%)

Query: 475  MSVRDYLSDVFTHA-VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            M++R  L +    A V    PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1    MNIRQILVEKAVAAMVAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKLK--- 52

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
               NP ++AQ I          N  ++ +  + E+A PGF+N+ L      E + D + +
Sbjct: 53   --TNPRELAQKIID--------NLDVSDIASQTEIAGPGFINIHLKP----EFLADTLSS 98

Query: 594  GVQPPTLN-----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
              Q   L          V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  V R N
Sbjct: 99   ANQDEKLGVAEHASAQNVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDSVTRQN 158

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            HVGDWGTQFGMLIAHL+D     +  +S  +ADL+ FY+++KKRFD+++ F  +A   VV
Sbjct: 159  HVGDWGTQFGMLIAHLEDLLNQGVDLESVALADLETFYRDAKKRFDDEDGFADKARDYVV 218

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKK 764
             LQ  D   +K W++  D S +  +++Y +LNVTL     + ES Y   ++ ++  L++K
Sbjct: 219  KLQGGDAHCEKLWKLFIDTSVKHSEEVYAKLNVTLKPEDIKAESAYNDALQGVITLLKEK 278

Query: 765  GLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
            G+   D G ++++        G   + IV KS GGF Y T+DLAA   R  +  AD I+ 
Sbjct: 279  GIAVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYATTDLAACDYRSNKLGADRILI 338

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
              D  Q +HF  +E  A+KAG+L  ++T  +F  FG ++GED K FKTR+G TVKL+ELL
Sbjct: 339  FVDARQSLHFNQVELTARKAGLLR-DETTYEFCPFGTMMGEDGKPFKTRTGGTVKLAELL 397

Query: 880  DEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDD 939
            +E + R+ DKL +  R ++L+  E +E  + V  G +KYADLS NR  DY+F++D ML  
Sbjct: 398  EEAVSRATDKLAE--RESDLSAEERAEIARKVGIGAVKYADLSKNRTSDYIFNWDTMLSF 455

Query: 940  RGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLM 999
             G TA YL YAYTR+ SI R AGI++  L     + P+S+   +E ALA  L++  +VL 
Sbjct: 456  EGATAPYLQYAYTRVRSIFRKAGIDAASL-----NAPISIVEAQEKALAIKLIQFEEVLD 510

Query: 1000 LVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
             +  D   H LC YLY++++ +  FY+ C  ++   E   K     RL+L    AK + K
Sbjct: 511  QMIGDATPHVLCSYLYELASLYMSFYETCPVLKDGVEPATK---ESRLMLCNLVAKTLAK 567

Query: 1060 CFDILNI 1066
              D+L I
Sbjct: 568  GLDLLGI 574



 Score =  214 bits (545), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/365 (37%), Positives = 198/365 (54%), Gaps = 37/365 (10%)

Query: 85  MSVRDYLSDVFTHA-VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           M++R  L +    A V    PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1   MNIRQILVEKAVAAMVAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKLK--- 52

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
              NP ++AQ I          N  ++ +  + E+A PGF+N+ L      E + D + +
Sbjct: 53  --TNPRELAQKIID--------NLDVSDIASQTEIAGPGFINIHLKP----EFLADTLSS 98

Query: 204 GVQPPTLN-----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
             Q   L          V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  V R N
Sbjct: 99  ANQDEKLGVAEHASAQNVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDSVTRQN 158

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 317
           HVGDWGTQFGMLIAHL+D     +  +S  +ADL+ FY+++KKRFD+++ F  +A   VV
Sbjct: 159 HVGDWGTQFGMLIAHLEDLLNQGVDLESVALADLETFYRDAKKRFDDEDGFADKARDYVV 218

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKK 374
            LQ  D   +K W++  D S +  +++Y +LNVTL     + ES Y   ++ ++  L++K
Sbjct: 219 KLQGGDAHCEKLWKLFIDTSVKHSEEVYAKLNVTLKPEDIKAESAYNDALQGVITLLKEK 278

Query: 375 GLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVY 429
           G+   D G ++++        G   + IV KS GGF Y T+DLAA   R  +  AD I+ 
Sbjct: 279 GIAVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYATTDLAACDYRSNKLGADRILI 338

Query: 430 VTDHR 434
             D R
Sbjct: 339 FVDAR 343



 Score =  214 bits (545), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/365 (37%), Positives = 198/365 (54%), Gaps = 37/365 (10%)

Query: 1102 MSVRDYLSDVFTHA-VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            M++R  L +    A V    PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1    MNIRQILVEKAVAAMVAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKLK--- 52

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
               NP ++AQ I          N  ++ +  + E+A PGF+N+ L      E + D + +
Sbjct: 53   --TNPRELAQKIID--------NLDVSDIASQTEIAGPGFINIHLKP----EFLADTLSS 98

Query: 1221 GVQPPTLN-----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
              Q   L          V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  V R N
Sbjct: 99   ANQDEKLGVAEHASAQNVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDSVTRQN 158

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            HVGDWGTQFGMLIAHL+D     +  +S  +ADL+ FY+++KKRFD+++ F  +A   VV
Sbjct: 159  HVGDWGTQFGMLIAHLEDLLNQGVDLESVALADLETFYRDAKKRFDDEDGFADKARDYVV 218

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKK 1391
             LQ  D   +K W++  D S +  +++Y +LNVTL     + ES Y   ++ ++  L++K
Sbjct: 219  KLQGGDAHCEKLWKLFIDTSVKHSEEVYAKLNVTLKPEDIKAESAYNDALQGVITLLKEK 278

Query: 1392 GLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVY 1446
            G+   D G ++++        G   + IV KS GGF Y T+DLAA   R  +  AD I+ 
Sbjct: 279  GIAVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYATTDLAACDYRSNKLGADRILI 338

Query: 1447 VTDHR 1451
              D R
Sbjct: 339  FVDAR 343


>gi|304413606|ref|ZP_07395050.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283697|gb|EFL92091.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 576

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 229/608 (37%), Positives = 345/608 (56%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+    A+  A    G    + A   +    +FGD+Q N  M++ K+      
Sbjct: 1    MNIQALLSNKINQAMIAA----GASPDTDAQVRQSAKPQFGDYQANAVMSVAKMLNIP-- 54

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A  I   +         LA +  KIE+A PGF+N+FL R +   Q+  I+   
Sbjct: 55   ---PRQLADKIVQRL--------DLAGIAQKIEIAGPGFINIFLDRQWLATQVDHILKAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V P T      +++D+S+PNIAKEMHVGHLRSTIIGD  +R L  LGH+V+R N
Sbjct: 104  KLGLTSVIPQT------IVIDYSAPNIAKEMHVGHLRSTIIGDATARTLTLLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K          ++DL+ FY+ +KK +DED  F + A   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQRENADDMALSDLEKFYRAAKKNYDEDNEFAQHARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W  + D++    Q  Y RL+VTLT+    GES Y   +  ++  L+ KG
Sbjct: 217  LQAGDEHCRSMWRKLVDITMEQNQLSYQRLHVTLTKEDIMGESLYNPMLPGIITDLKTKG 276

Query: 766  LLELDDGRKIMW-GE--DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++ GE  ++   PM ++  K DGG+ Y T+D+A  + R +   AD I+Y 
Sbjct: 277  LAVESNGATVVFVGEYKNKKGEPMGVIVQKEDGGYLYATTDIACAKYRYQTLGADRILYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
            TD  Q  H   + + A++AG + P    ++   FG++LG+D K FK+R+G+ +KL++LLD
Sbjct: 337  TDSRQHQHLTQIWQIARQAGYV-PESMPLEHHMFGMMLGKDGKPFKSRTGENIKLADLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   +++KN   +++P EL +   AV  G +KYADLS NR  DY+F +D ML   
Sbjct: 396  EAIERAGKLIREKN--PDISPQELKQIADAVGIGALKYADLSKNRTTDYIFDWDNMLTFD 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTRI SI + A I+ E L +     PV +  ++E AL  +LL+  +++  
Sbjct: 454  GNTAPYIQYAYTRIISIFKRAAIDEEHLNL-----PVIITEDREAALTTSLLQFEEIITT 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V RD   H +C YLY+++  FS FY++C  +    E   ++    RL LA  TAK +K+ 
Sbjct: 509  VARDGTPHVMCSYLYNLAVLFSSFYEHCPILNAGNEQTCQS----RLKLALLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             D+L I+T
Sbjct: 565  LDVLGIQT 572



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 150/445 (33%), Positives = 226/445 (50%), Gaps = 43/445 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+    A+  A    G    + A   +    +FGD+Q N  M++ K+      
Sbjct: 1   MNIQALLSNKINQAMIAA----GASPDTDAQVRQSAKPQFGDYQANAVMSVAKMLNIP-- 54

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A  I   +         LA +  KIE+A PGF+N+FL R +   Q+  I+   
Sbjct: 55  ---PRQLADKIVQRL--------DLAGIAQKIEIAGPGFINIFLDRQWLATQVDHILKAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V P T      +++D+S+PNIAKEMHVGHLRSTIIGD  +R L  LGH+V+R N
Sbjct: 104 KLGLTSVIPQT------IVIDYSAPNIAKEMHVGHLRSTIIGDATARTLTLLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K          ++DL+ FY+ +KK +DED  F + A   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQRENADDMALSDLEKFYRAAKKNYDEDNEFAQHARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W  + D++    Q  Y RL+VTLT+    GES Y   +  ++  L+ KG
Sbjct: 217 LQAGDEHCRSMWRKLVDITMEQNQLSYQRLHVTLTKEDIMGESLYNPMLPGIITDLKTKG 276

Query: 376 LLELDDGRKIMW-GE--DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++ GE  ++   PM ++  K DGG+ Y T+D+A  + R +   AD I+Y 
Sbjct: 277 LAVESNGATVVFVGEYKNKKGEPMGVIVQKEDGGYLYATTDIACAKYRYQTLGADRILYY 336

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM----NVPVRDRMSVRDYLSDVFT 486
           TD R  HQ L  I +  ++ G    S          M      P + R      L+D+  
Sbjct: 337 TDSRQ-HQHLTQIWQIARQAGYVPESMPLEHHMFGMMLGKDGKPFKSRTGENIKLADLLD 395

Query: 487 HAVQVAFPELGDKTASVASTNEKYV 511
            A++ A   + +K   ++    K +
Sbjct: 396 EAIERAGKLIREKNPDISPQELKQI 420



 Score =  223 bits (568), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/371 (36%), Positives = 201/371 (54%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+    A+  A    G    + A   +    +FGD+Q N  M++ K+      
Sbjct: 1    MNIQALLSNKINQAMIAA----GASPDTDAQVRQSAKPQFGDYQANAVMSVAKMLNIP-- 54

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A  I   +         LA +  KIE+A PGF+N+FL R +   Q+  I+   
Sbjct: 55   ---PRQLADKIVQRL--------DLAGIAQKIEIAGPGFINIFLDRQWLATQVDHILKAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V P T      +++D+S+PNIAKEMHVGHLRSTIIGD  +R L  LGH+V+R N
Sbjct: 104  KLGLTSVIPQT------IVIDYSAPNIAKEMHVGHLRSTIIGDATARTLTLLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K          ++DL+ FY+ +KK +DED  F + A   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQRENADDMALSDLEKFYRAAKKNYDEDNEFAQHARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W  + D++    Q  Y RL+VTLT+    GES Y   +  ++  L+ KG
Sbjct: 217  LQAGDEHCRSMWRKLVDITMEQNQLSYQRLHVTLTKEDIMGESLYNPMLPGIITDLKTKG 276

Query: 1393 LLELDDGRKIMW-GE--DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++ GE  ++   PM ++  K DGG+ Y T+D+A  + R +   AD I+Y 
Sbjct: 277  LAVESNGATVVFVGEYKNKKGEPMGVIVQKEDGGYLYATTDIACAKYRYQTLGADRILYY 336

Query: 1448 TDHRSYHQVLQ 1458
            TD R +  + Q
Sbjct: 337  TDSRQHQHLTQ 347


>gi|331007404|ref|ZP_08330588.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418782|gb|EGG93264.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 582

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 246/608 (40%), Positives = 343/608 (56%), Gaps = 44/608 (7%)

Query: 475  MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            M++R+ LSD  T A+  A  P   +  A VA++ +     FGD+Q N AM   KI K K 
Sbjct: 1    MNIRNLLSDYVTQAMLAAGLP--AECQAHVAASKKA---GFGDYQANGAMGAAKIAKAK- 54

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
                P DIAQ I      +L  N  +  +I  IE+A PGF+N+ L   +    I+  I+N
Sbjct: 55   ----PRDIAQQI----VDQLQQNSDVQVMISHIEIAGPGFINLTLDPQWLAANIR--IIN 104

Query: 594  -----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
                 G+Q    ++   V+VD+SSPN+AKEMHVGHLRS+IIGD + R LE+ GH+VVR N
Sbjct: 105  QDKQLGIQD---DQPQTVVVDYSSPNLAKEMHVGHLRSSIIGDAVVRTLEFQGHNVVRQN 161

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA L+++  +  + S  + DL+ FY+ SKK FDE E F  +A   VV 
Sbjct: 162  HVGDWGTQFGMLIAELEEQLQEGESASLALKDLEGFYQSSKKHFDESEAFANKARDYVVK 221

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D      WE    VS    Q+IY +LNVTL     RGES Y   +  LV  L+++G
Sbjct: 222  LQSGDAHVLTLWEQFRRVSLTHSQEIYQQLNVTLNADDVRGESAYNDDLAPLVAELQQQG 281

Query: 766  LLELDDGRKIMWGEDRG-----SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L     G ++++ E+         P+ I K  GGF Y T+DLAA+R R     AD ++Y 
Sbjct: 282  LAVESQGAQVVFLEEMADKEGNPSPVIIQKQGGGFLYATTDLAALRYRSHTLHADRVLYF 341

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +H + +   AKKAG +N N + ++   FG ++G D K FKTR+G TVKL++LL 
Sbjct: 342  IDARQSLHMQQVFTLAKKAGFVNDNIS-LEHHPFGTMMGADGKPFKTRTGGTVKLADLLV 400

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + DKN    L+  E +   + V  G IKYADLS  R  DY+F+++ ML   
Sbjct: 401  EAVERAEKVVADKN--PNLSAEERAVIARKVGIGAIKYADLSKTRTNDYIFNWETMLSFE 458

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNT+ YL YAY RI SI R A     D+ V+A ++ ++L    E AL+   L+  +V+  
Sbjct: 459  GNTSPYLQYAYARIQSIFRKA-----DIDVSALNSELALNEPAEVALSIKTLQFAEVVEQ 513

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
             TR+   H LC YLYD++  F  FY+ C  ++   +G  +     RL LA + A  + K 
Sbjct: 514  STREAYPHLLCTYLYDLAGLFMRFYEQCPILK---DGIDEDTKNSRLQLALSVANTLNKG 570

Query: 1061 FDILNIRT 1068
             D+L I T
Sbjct: 571  LDLLGIET 578



 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 166/438 (37%), Positives = 234/438 (53%), Gaps = 36/438 (8%)

Query: 85  MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           M++R+ LSD  T A+  A  P   +  A VA++ +     FGD+Q N AM   KI K K 
Sbjct: 1   MNIRNLLSDYVTQAMLAAGLP--AECQAHVAASKKA---GFGDYQANGAMGAAKIAKAK- 54

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
               P DIAQ I      +L  N  +  +I  IE+A PGF+N+ L   +    I+  I+N
Sbjct: 55  ----PRDIAQQI----VDQLQQNSDVQVMISHIEIAGPGFINLTLDPQWLAANIR--IIN 104

Query: 204 -----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
                G+Q    ++   V+VD+SSPN+AKEMHVGHLRS+IIGD + R LE+ GH+VVR N
Sbjct: 105 QDKQLGIQD---DQPQTVVVDYSSPNLAKEMHVGHLRSSIIGDAVVRTLEFQGHNVVRQN 161

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA L+++  +  + S  + DL+ FY+ SKK FDE E F  +A   VV 
Sbjct: 162 HVGDWGTQFGMLIAELEEQLQEGESASLALKDLEGFYQSSKKHFDESEAFANKARDYVVK 221

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D      WE    VS    Q+IY +LNVTL     RGES Y   +  LV  L+++G
Sbjct: 222 LQSGDAHVLTLWEQFRRVSLTHSQEIYQQLNVTLNADDVRGESAYNDDLAPLVAELQQQG 281

Query: 376 LLELDDGRKIMWGEDRG-----SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L     G ++++ E+         P+ I K  GGF Y T+DLAA+R R     AD ++Y 
Sbjct: 282 LAVESQGAQVVFLEEMADKEGNPSPVIIQKQGGGFLYATTDLAALRYRSHTLHADRVLYF 341

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTH 487
            D R    + Q     +K   ++ + S +       M     P + R      L+D+   
Sbjct: 342 IDARQSLHMQQVFTLAKKAGFVNDNISLEHHPFGTMMGADGKPFKTRTGGTVKLADLLVE 401

Query: 488 AVQVAFPELGDKTASVAS 505
           AV+ A   + DK  ++++
Sbjct: 402 AVERAEKVVADKNPNLSA 419



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/364 (42%), Positives = 206/364 (56%), Gaps = 33/364 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            M++R+ LSD  T A+  A  P   +  A VA++ +     FGD+Q N AM   KI K K 
Sbjct: 1    MNIRNLLSDYVTQAMLAAGLP--AECQAHVAASKKA---GFGDYQANGAMGAAKIAKAK- 54

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
                P DIAQ I      +L  N  +  +I  IE+A PGF+N+ L   +    I+  I+N
Sbjct: 55   ----PRDIAQQI----VDQLQQNSDVQVMISHIEIAGPGFINLTLDPQWLAANIR--IIN 104

Query: 1221 -----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
                 G+Q    ++   V+VD+SSPN+AKEMHVGHLRS+IIGD + R LE+ GH+VVR N
Sbjct: 105  QDKQLGIQD---DQPQTVVVDYSSPNLAKEMHVGHLRSSIIGDAVVRTLEFQGHNVVRQN 161

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA L+++  +  + S  + DL+ FY+ SKK FDE E F  +A   VV 
Sbjct: 162  HVGDWGTQFGMLIAELEEQLQEGESASLALKDLEGFYQSSKKHFDESEAFANKARDYVVK 221

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D      WE    VS    Q+IY +LNVTL     RGES Y   +  LV  L+++G
Sbjct: 222  LQSGDAHVLTLWEQFRRVSLTHSQEIYQQLNVTLNADDVRGESAYNDDLAPLVAELQQQG 281

Query: 1393 LLELDDGRKIMWGEDRG-----SIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L     G ++++ E+         P+ I K  GGF Y T+DLAA+R R     AD ++Y 
Sbjct: 282  LAVESQGAQVVFLEEMADKEGNPSPVIIQKQGGGFLYATTDLAALRYRSHTLHADRVLYF 341

Query: 1448 TDHR 1451
             D R
Sbjct: 342  IDAR 345


>gi|188533617|ref|YP_001907414.1| arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238691998|sp|B2VJB6.1|SYR_ERWT9 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|188028659|emb|CAO96521.1| Arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 576

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/608 (39%), Positives = 349/608 (57%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  +HA+ +A     D    V  + +    +FGD+Q N  MA+ K      +
Sbjct: 1    MNIQALLSEKVSHAM-IAVGAPADCEPQVRQSAKA---QFGDYQANGMMAVAK------K 50

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P    + +A  V  +L     L+ +  K+E+A PGF+N+FL++ +   QI  ++   
Sbjct: 51   MGMP---PRQLAEKVLEQL----DLSGIAAKVEIAGPGFINIFLAQEWLSAQIDGVLTAP 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV P        V++D+S+PN+AKEMHVGH+RSTIIGD  +R LE+LGH V+R NHVG
Sbjct: 104  KLGVAPVAPKT---VVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLEFLGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA L+ +  ++  ++  +ADL+AFY+E+K+ +DED  F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAFLEKQQSEH-HEAIALADLEAFYREAKRTYDEDPAFAERARGYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +K W+ + DV+    Q IYDR+NVTLT     GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWKQLVDVTMTQNQLIYDRMNVTLTRDDVMGESLYNDMLPGIVADLKAKGLAV 279

Query: 769  LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E  KAD ++Y 
Sbjct: 280  ESEGATVVFLDEYKNKEGEPMGVI---IRKKDGGYLYTTTDIACAKYRYETLKADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PDSIPLEHHMFGMMLGKDGKPFKTRAGGTIKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + +KN   ++   EL+     V  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAVDRATKLVAEKN--PDMPADELNALANIVGIGAVKYADLSKSRTTDYIFDWDNMLAFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ S+ R AGI++E     A S    +  ++E ALA  LL+  + +  
Sbjct: 454  GNTAPYMQYAYTRVLSVFRKAGIDAE-----AVSGVTRIVDDREAALAVRLLQFEETITQ 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V RD   H +C YLYD++  FS FY++C  +  + E   ++    RL LA  TAK +K+ 
Sbjct: 509  VARDGMPHVMCAYLYDLAGLFSGFYEHCPILNAEDEATKQS----RLRLALLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             D L I T
Sbjct: 565  LDTLGIET 572



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 145/372 (38%), Positives = 215/372 (57%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  +HA+ +A     D    V  + +    +FGD+Q N  MA+ K      +
Sbjct: 1   MNIQALLSEKVSHAM-IAVGAPADCEPQVRQSAKA---QFGDYQANGMMAVAK------K 50

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P    + +A  V  +L     L+ +  K+E+A PGF+N+FL++ +   QI  ++   
Sbjct: 51  MGMP---PRQLAEKVLEQL----DLSGIAAKVEIAGPGFINIFLAQEWLSAQIDGVLTAP 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GV P        V++D+S+PN+AKEMHVGH+RSTIIGD  +R LE+LGH V+R NHVG
Sbjct: 104 KLGVAPVAPKT---VVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLEFLGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA L+ +  ++  ++  +ADL+AFY+E+K+ +DED  F +RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAFLEKQQSEH-HEAIALADLEAFYREAKRTYDEDPAFAERARGYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +K W+ + DV+    Q IYDR+NVTLT     GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRKMWKQLVDVTMTQNQLIYDRMNVTLTRDDVMGESLYNDMLPGIVADLKAKGLAV 279

Query: 379 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
             +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E  KAD ++Y 
Sbjct: 280 ESEGATVVFLDEYKNKEGEPMGVI---IRKKDGGYLYTTTDIACAKYRYETLKADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/371 (38%), Positives = 214/371 (57%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  +HA+ +A     D    V  + +    +FGD+Q N  MA+ K      +
Sbjct: 1    MNIQALLSEKVSHAM-IAVGAPADCEPQVRQSAKA---QFGDYQANGMMAVAK------K 50

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P    + +A  V  +L     L+ +  K+E+A PGF+N+FL++ +   QI  ++   
Sbjct: 51   MGMP---PRQLAEKVLEQL----DLSGIAAKVEIAGPGFINIFLAQEWLSAQIDGVLTAP 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV P        V++D+S+PN+AKEMHVGH+RSTIIGD  +R LE+LGH V+R NHVG
Sbjct: 104  KLGVAPVAPKT---VVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLEFLGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA L+ +  ++  ++  +ADL+AFY+E+K+ +DED  F +RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAFLEKQQSEH-HEAIALADLEAFYREAKRTYDEDPAFAERARGYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +K W+ + DV+    Q IYDR+NVTLT     GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWKQLVDVTMTQNQLIYDRMNVTLTRDDVMGESLYNDMLPGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E  KAD ++Y 
Sbjct: 280  ESEGATVVFLDEYKNKEGEPMGVI---IRKKDGGYLYTTTDIACAKYRYETLKADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|407070812|ref|ZP_11101650.1| arginyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
          Length = 577

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 223/564 (39%), Positives = 324/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  +Q    + +      + +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDEAFLAKQADAALADSRLGVAVAETQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+++GL + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNNMLPTIVADLKEQGLAKEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELAEEEKATIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AGI+ + L        + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGISMDSLE-----GEIKVTEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    TV  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----TVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/414 (35%), Positives = 226/414 (54%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  +Q    + +      + +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FLNIFLDEAFLAKQADAALADSRLGVAVAETQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+++GL + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNNMLPTIVADLKEQGLAKEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R EE  AD ++Y  D R +  ++QA     K   I  S S +       +     P 
Sbjct: 322 AKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPESVSLEHHAFGMMLGKDGKPF 381

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPELGDKT-ASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL ++  A++A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAEVRAAQLIESKNPELAEEEKATIANTVAMAAVKYADL 435



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 195/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  +Q    + +      + +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDEAFLAKQADAALADSRLGVAVAETQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+++GL + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNNMLPTIVADLKEQGLAKEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQ 348


>gi|262041990|ref|ZP_06015172.1| arginine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
            ATCC 13884]
 gi|259040688|gb|EEW41777.1| arginine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
            ATCC 13884]
          Length = 577

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +  +    +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQEN-SGEMALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL    + V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELENLAKVVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AGI+      A    PV 
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDEN----AMIDAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  IAEDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADNVNRALQSERLGVTKP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +  +    +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQEN-SGEMALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  233 bits (594), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P   +   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKP---QAQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +  +    +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQEN-SGEMALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|213647449|ref|ZP_03377502.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. J185]
 gi|213857447|ref|ZP_03384418.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. M223]
 gi|289824037|ref|ZP_06543635.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
            Typhi str. E98-3139]
          Length = 516

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/529 (41%), Positives = 315/529 (59%), Gaps = 30/529 (5%)

Query: 553  LATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVD 609
            + T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  ++VD
Sbjct: 1    MLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVD 57

Query: 610  FSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP 669
            +S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  
Sbjct: 58   YSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQ 117

Query: 670  DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRR 729
            +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D++  
Sbjct: 118  EN-AGDMALADLEGFYRDAKKHYDEDETFAERARNYVVKLQSGDTYFREMWRKLVDITMT 176

Query: 730  DFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGS 783
              Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   ++  
Sbjct: 177  QNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEG 236

Query: 784  IPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGI 841
             PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D  Q  H        +KAG 
Sbjct: 237  DPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGY 296

Query: 842  LNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTP 901
            + P+   ++   FG++LG+D K FKTR+G TVKL++LLDE L R+   + +KN   ++  
Sbjct: 297  V-PDSVPLEHHMFGMMLGKDGKPFKTRTGGTVKLADLLDEALERARRLVAEKN--PDMPA 353

Query: 902  TELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTA 961
             EL +   AV  G +KYADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A
Sbjct: 354  DELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKA 413

Query: 962  GINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAF 1021
             I+ +    A  S PV +  ++E  LA  LL+  + L +V R+   H +C YLYD++  F
Sbjct: 414  DIDEQ----ALASAPVIISEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLF 469

Query: 1022 SEFYDNCYCI--EKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            S FY++C  +  E DA      V   RL LA+ TAK +K   D L I T
Sbjct: 470  SGFYEHCPILSAENDA------VRNSRLKLAQLTAKTLKLGLDTLGIET 512



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 122/291 (41%), Positives = 180/291 (61%), Gaps = 15/291 (5%)

Query: 163 LATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVD 219
           + T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  ++VD
Sbjct: 1   MLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVD 57

Query: 220 FSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP 279
           +S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  
Sbjct: 58  YSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQ 117

Query: 280 DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRR 339
           +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D++  
Sbjct: 118 EN-AGDMALADLEGFYRDAKKHYDEDETFAERARNYVVKLQSGDTYFREMWRKLVDITMT 176

Query: 340 DFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGS 393
             Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   ++  
Sbjct: 177 QNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEG 236

Query: 394 IPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 237 DPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 287



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/290 (41%), Positives = 179/290 (61%), Gaps = 15/290 (5%)

Query: 1180 LATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVD 1236
            + T+  L+ +  K+E+A PGF+N+FL   +  EQ++  + +   GV  PT   +  ++VD
Sbjct: 1    MLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPT---RQTIVVD 57

Query: 1237 FSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP 1296
            +S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  
Sbjct: 58   YSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQ 117

Query: 1297 DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRR 1356
            +       +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D++  
Sbjct: 118  EN-AGDMALADLEGFYRDAKKHYDEDETFAERARNYVVKLQSGDTYFREMWRKLVDITMT 176

Query: 1357 DFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGS 1410
              Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++ +   ++  
Sbjct: 177  QNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEG 236

Query: 1411 IPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 237  DPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 286


>gi|386285072|ref|ZP_10062290.1| arginyl-tRNA synthetase [Sulfurovum sp. AR]
 gi|385343925|gb|EIF50643.1| arginyl-tRNA synthetase [Sulfurovum sp. AR]
          Length = 565

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/574 (39%), Positives = 333/574 (58%), Gaps = 48/574 (8%)

Query: 505  STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVID 564
            S  E    +FGDFQ N AMAL K        KNP         ++ +E+  N  L  +++
Sbjct: 26   SVTEATKAEFGDFQFNGAMALAKPLG-----KNP--------RMIATEIIENLDLTGILE 72

Query: 565  KIEVAKPGFVNVFLSRVYAGEQIKD------IIVNGVQPPTLNKKLRVLVDFSSPNIAKE 618
            K E+A PGF+N++L+  +   Q +       + V   + P     ++V+VD+S PN+AK+
Sbjct: 73   KAEIAGPGFINLWLNPSWLASQCESARKDSRLGVEKRETP-----VKVVVDYSGPNMAKQ 127

Query: 619  MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 678
            MHVGHLRS+IIGDT++ LL YLG DV+R NH+GDWGTQFGMLIA+L++   +    S  +
Sbjct: 128  MHVGHLRSSIIGDTLANLLTYLGDDVIRQNHIGDWGTQFGMLIAYLEEIHEE---GSVSL 184

Query: 679  ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 738
             DL+ FYK++K RFDED+ F  +A + VV +Q  D      W+   D+S    +++Y++L
Sbjct: 185  KDLEQFYKDAKGRFDEDQAFADKAREYVVKIQSGDTHCLALWQKFIDISLGHCEEVYEKL 244

Query: 739  NVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 795
             V LT    R ESFY   +  ++  L++KGLL   DG + ++ E    +P+ + K DGG+
Sbjct: 245  GVNLTREDVRAESFYNDDLHSVISDLDEKGLLTQSDGAQCVFLEGE-EVPVIVQKGDGGY 303

Query: 796  TYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFG 855
             Y T+DLAA+R R +   A  I YV D  QG HF+ +   AK+AG + P   +++ + FG
Sbjct: 304  LYATTDLAALRYRAQTLGAQRISYVVDARQGEHFKQVFRVAKEAGFV-PEDVKLEHIAFG 362

Query: 856  VVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGC 915
             ++G+D K FKTR G TVKL ELLDE + ++ + + DK  ++E    EL    + +  G 
Sbjct: 363  TMMGQDGKPFKTREGGTVKLIELLDEAVAKAKETINDKENYSE---GELERLAKIIGIGA 419

Query: 916  IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTA-GINSEDLRVAAQS 974
            +KYADLS NR  +Y+F++DKML   GNT++Y+ YAY RI SI R   G    D+ +    
Sbjct: 420  VKYADLSINRESNYIFNWDKMLSFEGNTSLYMQYAYARIQSIFRKYDGPMEGDIIIGD-- 477

Query: 975  TPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKD 1034
               +LEH     L+  LLR  DVL     D   + +  YLY+++T F  FY+    ++  
Sbjct: 478  ---ALEHR----LSTMLLRFEDVLDRAAVDAAPNQITTYLYELATLFMRFYEQNPILK-- 528

Query: 1035 AEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             EG  +     RLLLA+ TAK +K+  DIL I T
Sbjct: 529  -EGVDEVTKMSRLLLADLTAKTIKQGLDILGIET 561



 Score =  237 bits (605), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/343 (39%), Positives = 199/343 (58%), Gaps = 34/343 (9%)

Query: 115 STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVID 174
           S  E    +FGDFQ N AMAL K        KNP         ++ +E+  N  L  +++
Sbjct: 26  SVTEATKAEFGDFQFNGAMALAKPLG-----KNP--------RMIATEIIENLDLTGILE 72

Query: 175 KIEVAKPGFVNVFLSRVYAGEQIKD------IIVNGVQPPTLNKKLRVLVDFSSPNIAKE 228
           K E+A PGF+N++L+  +   Q +       + V   + P     ++V+VD+S PN+AK+
Sbjct: 73  KAEIAGPGFINLWLNPSWLASQCESARKDSRLGVEKRETP-----VKVVVDYSGPNMAKQ 127

Query: 229 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 288
           MHVGHLRS+IIGDT++ LL YLG DV+R NH+GDWGTQFGMLIA+L++   +    S  +
Sbjct: 128 MHVGHLRSSIIGDTLANLLTYLGDDVIRQNHIGDWGTQFGMLIAYLEEIHEE---GSVSL 184

Query: 289 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 348
            DL+ FYK++K RFDED+ F  +A + VV +Q  D      W+   D+S    +++Y++L
Sbjct: 185 KDLEQFYKDAKGRFDEDQAFADKAREYVVKIQSGDTHCLALWQKFIDISLGHCEEVYEKL 244

Query: 349 NVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 405
            V LT    R ESFY   +  ++  L++KGLL   DG + ++ E    +P+ + K DGG+
Sbjct: 245 GVNLTREDVRAESFYNDDLHSVISDLDEKGLLTQSDGAQCVFLEGE-EVPVIVQKGDGGY 303

Query: 406 TYDTSDLAAIRQRIEEEKADWIVYVTDHRS---YHQVLQAIAE 445
            Y T+DLAA+R R +   A  I YV D R    + QV +   E
Sbjct: 304 LYATTDLAALRYRAQTLGAQRISYVVDARQGEHFKQVFRVAKE 346



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/329 (40%), Positives = 194/329 (58%), Gaps = 31/329 (9%)

Query: 1132 STNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVID 1191
            S  E    +FGDFQ N AMAL K        KNP         ++ +E+  N  L  +++
Sbjct: 26   SVTEATKAEFGDFQFNGAMALAKPLG-----KNP--------RMIATEIIENLDLTGILE 72

Query: 1192 KIEVAKPGFVNVFLSRVYAGEQIKD------IIVNGVQPPTLNKKLRVLVDFSSPNIAKE 1245
            K E+A PGF+N++L+  +   Q +       + V   + P     ++V+VD+S PN+AK+
Sbjct: 73   KAEIAGPGFINLWLNPSWLASQCESARKDSRLGVEKRETP-----VKVVVDYSGPNMAKQ 127

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRS+IIGDT++ LL YLG DV+R NH+GDWGTQFGMLIA+L++   +    S  +
Sbjct: 128  MHVGHLRSSIIGDTLANLLTYLGDDVIRQNHIGDWGTQFGMLIAYLEEIHEE---GSVSL 184

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
             DL+ FYK++K RFDED+ F  +A + VV +Q  D      W+   D+S    +++Y++L
Sbjct: 185  KDLEQFYKDAKGRFDEDQAFADKAREYVVKIQSGDTHCLALWQKFIDISLGHCEEVYEKL 244

Query: 1366 NVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 1422
             V LT    R ESFY   +  ++  L++KGLL   DG + ++ E    +P+ + K DGG+
Sbjct: 245  GVNLTREDVRAESFYNDDLHSVISDLDEKGLLTQSDGAQCVFLEGE-EVPVIVQKGDGGY 303

Query: 1423 TYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             Y T+DLAA+R R +   A  I YV D R
Sbjct: 304  LYATTDLAALRYRAQTLGAQRISYVVDAR 332


>gi|52425385|ref|YP_088522.1| arginyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81386992|sp|Q65SX3.1|SYR_MANSM RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|52307437|gb|AAU37937.1| ArgS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 576

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 229/568 (40%), Positives = 335/568 (58%), Gaps = 42/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +   V         L+ + +K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----LNPREFAQKVLEQV--------DLSDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL++ +  +Q  D  +N    P    K      V++D+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLNKNWVAQQ-ADTALN---TPNFGIKTAHPQTVVIDYSSPNVAKEMHVGHLRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD ++R LE++G+ V+R NHVGDWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +
Sbjct: 138  IGDAVARALEFMGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHADAMQLSDLEAFYRAA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            K+ +D DE F  +A   VV LQ  D   +  W+ + D++ +  Q+ Y+RLNVTLTE+   
Sbjct: 197  KETYDNDEEFAVKARSYVVKLQSGDEYCRTMWKKLVDMTMQQNQRNYERLNVTLTEKDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTS 800
            GES Y   +  +V  L+K+GL   DDG  +++ +   ++   PM ++  K DGGF Y T+
Sbjct: 257  GESLYNPMLPAIVEDLKKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTT 316

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+AA + R     AD  +  +D  Q  H +      +KAG + P+   ++   FG++LG+
Sbjct: 317  DIAAAKYRYHTLHADRALVFSDTRQSQHMQQAWLITRKAGYV-PDSFSLEHHNFGMMLGK 375

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D K FKTRSG TVKL++LLDE + R+   + +KN  T L+  E +   +AVA G +KYAD
Sbjct: 376  DGKPFKTRSGGTVKLADLLDEAVERATLLINEKN--TALSEQEKAAVIEAVAIGSVKYAD 433

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS NR  DYVF +D ML   GNTA Y+ YAYTRI SI     +N   L  A     + + 
Sbjct: 434  LSKNRTTDYVFDWDNMLSFEGNTAPYMQYAYTRIRSIFNKTDVNPTALSAAH----IEIR 489

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
            ++KE ALA  LL+  + +  V +D   H LC YLY+++  FS FY++C  +  +AE  +K
Sbjct: 490  NDKERALAIKLLQFEEAVQTVAKDGTPHILCNYLYELAGVFSSFYEHCPIL--NAEEPVK 547

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 RL LA+ T K +K+  D+L I+T
Sbjct: 548  ---LSRLKLAKLTEKTLKQGLDLLGIKT 572



 Score =  228 bits (582), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/397 (35%), Positives = 218/397 (54%), Gaps = 33/397 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +   V         L+ + +K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKKLG-----LNPREFAQKVLEQV--------DLSDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL++ +  +Q  D  +N    P    K      V++D+SSPN+AKEMHVGHLRSTI
Sbjct: 82  FINIFLNKNWVAQQ-ADTALN---TPNFGIKTAHPQTVVIDYSSPNVAKEMHVGHLRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD ++R LE++G+ V+R NHVGDWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +
Sbjct: 138 IGDAVARALEFMGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHADAMQLSDLEAFYRAA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           K+ +D DE F  +A   VV LQ  D   +  W+ + D++ +  Q+ Y+RLNVTLTE+   
Sbjct: 197 KETYDNDEEFAVKARSYVVKLQSGDEYCRTMWKKLVDMTMQQNQRNYERLNVTLTEKDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTS 410
           GES Y   +  +V  L+K+GL   DDG  +++ +   ++   PM ++  K DGGF Y T+
Sbjct: 257 GESLYNPMLPAIVEDLKKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTT 316

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM--- 467
           D+AA + R     AD  +  +D R    + QA     K   +  S S +       +   
Sbjct: 317 DIAAAKYRYHTLHADRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHHNFGMMLGKD 376

Query: 468 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVA 504
             P + R      L+D+   AV+ A   + +K  +++
Sbjct: 377 GKPFKTRSGGTVKLADLLDEAVERATLLINEKNTALS 413



 Score =  226 bits (577), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/331 (39%), Positives = 194/331 (58%), Gaps = 30/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +   V         L+ + +K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKKLG-----LNPREFAQKVLEQV--------DLSDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL++ +  +Q  D  +N    P    K      V++D+SSPN+AKEMHVGHLRSTI
Sbjct: 82   FINIFLNKNWVAQQ-ADTALN---TPNFGIKTAHPQTVVIDYSSPNVAKEMHVGHLRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD ++R LE++G+ V+R NHVGDWGTQFGMLIA+L+ K  +    +  ++DL+AFY+ +
Sbjct: 138  IGDAVARALEFMGNHVIRANHVGDWGTQFGMLIAYLE-KMENEHADAMQLSDLEAFYRAA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            K+ +D DE F  +A   VV LQ  D   +  W+ + D++ +  Q+ Y+RLNVTLTE+   
Sbjct: 197  KETYDNDEEFAVKARSYVVKLQSGDEYCRTMWKKLVDMTMQQNQRNYERLNVTLTEKDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTS 1427
            GES Y   +  +V  L+K+GL   DDG  +++ +   ++   PM ++  K DGGF Y T+
Sbjct: 257  GESLYNPMLPAIVEDLKKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTT 316

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+AA + R     AD  +  +D R    + Q
Sbjct: 317  DIAAAKYRYHTLHADRALVFSDTRQSQHMQQ 347


>gi|152970935|ref|YP_001336044.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
            78578]
 gi|238895450|ref|YP_002920185.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            NTUH-K2044]
 gi|365137595|ref|ZP_09344309.1| arginyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
 gi|378979568|ref|YP_005227709.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            HS11286]
 gi|402780100|ref|YP_006635646.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            1084]
 gi|419973929|ref|ZP_14489351.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH1]
 gi|419979321|ref|ZP_14494613.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH2]
 gi|419985225|ref|ZP_14500367.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH4]
 gi|419990551|ref|ZP_14505522.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH5]
 gi|419997855|ref|ZP_14512648.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH6]
 gi|420002688|ref|ZP_14517338.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH7]
 gi|420009348|ref|ZP_14523832.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH8]
 gi|420014885|ref|ZP_14529189.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH9]
 gi|420019978|ref|ZP_14534168.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH10]
 gi|420025738|ref|ZP_14539745.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH11]
 gi|420030458|ref|ZP_14544284.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH12]
 gi|420036380|ref|ZP_14550040.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH14]
 gi|420043085|ref|ZP_14556575.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH16]
 gi|420048919|ref|ZP_14562230.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH17]
 gi|420053878|ref|ZP_14567054.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH18]
 gi|420059313|ref|ZP_14572321.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH19]
 gi|420065975|ref|ZP_14578778.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH20]
 gi|420073585|ref|ZP_14586209.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH21]
 gi|420076441|ref|ZP_14588912.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH22]
 gi|420084493|ref|ZP_14596750.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH23]
 gi|421910101|ref|ZP_16339894.1| Arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            ST258-K26BO]
 gi|421919064|ref|ZP_16348574.1| Arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            ST258-K28BO]
 gi|425076039|ref|ZP_18479142.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            WGLW1]
 gi|425082219|ref|ZP_18485316.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            WGLW2]
 gi|425086672|ref|ZP_18489765.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            WGLW3]
 gi|425092263|ref|ZP_18495348.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            WGLW5]
 gi|428148249|ref|ZP_18996135.1| Arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            ST512-K30BO]
 gi|428931313|ref|ZP_19004911.1| arginyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
 gi|428937860|ref|ZP_19010994.1| arginyl-tRNA ligase [Klebsiella pneumoniae VA360]
 gi|449058530|ref|ZP_21736649.1| arginyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
 gi|166232797|sp|A6TB43.1|SYR_KLEP7 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|150955784|gb|ABR77814.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
            78578]
 gi|238547767|dbj|BAH64118.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            NTUH-K2044]
 gi|363655906|gb|EHL94693.1| arginyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
 gi|364518979|gb|AEW62107.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            HS11286]
 gi|397347176|gb|EJJ40285.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH1]
 gi|397349269|gb|EJJ42364.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH2]
 gi|397352273|gb|EJJ45353.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH4]
 gi|397361864|gb|EJJ54521.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH6]
 gi|397366564|gb|EJJ59180.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH5]
 gi|397370712|gb|EJJ63276.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH7]
 gi|397377405|gb|EJJ69639.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH9]
 gi|397381801|gb|EJJ73969.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH8]
 gi|397388368|gb|EJJ80346.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH10]
 gi|397396675|gb|EJJ88362.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH11]
 gi|397401714|gb|EJJ93333.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH12]
 gi|397406702|gb|EJJ98113.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH14]
 gi|397414331|gb|EJK05531.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH17]
 gi|397414899|gb|EJK06091.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH16]
 gi|397423615|gb|EJK14539.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH18]
 gi|397430782|gb|EJK21470.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH20]
 gi|397435730|gb|EJK26338.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH19]
 gi|397437776|gb|EJK28324.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH21]
 gi|397447147|gb|EJK37347.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH22]
 gi|397450179|gb|EJK40292.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            KPNIH23]
 gi|402541010|gb|AFQ65159.1| Arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            1084]
 gi|405593543|gb|EKB66984.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            WGLW1]
 gi|405600471|gb|EKB73636.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            WGLW2]
 gi|405603396|gb|EKB76517.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            WGLW3]
 gi|405612238|gb|EKB84996.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            WGLW5]
 gi|410115996|emb|CCM82519.1| Arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            ST258-K26BO]
 gi|410118703|emb|CCM91199.1| Arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            ST258-K28BO]
 gi|426306554|gb|EKV68654.1| arginyl-tRNA ligase [Klebsiella pneumoniae VA360]
 gi|426308209|gb|EKV70277.1| arginyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
 gi|427541772|emb|CCM92273.1| Arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
            ST512-K30BO]
 gi|448875333|gb|EMB10353.1| arginyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
          Length = 577

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 322/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL    + V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELENLAKVVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AGI+      A    PV 
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDEN----AMIDAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  IAEDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 190/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|401675886|ref|ZP_10807873.1| arginyl-tRNA ligase [Enterobacter sp. SST3]
 gi|400216930|gb|EJO47829.1| arginyl-tRNA ligase [Enterobacter sp. SST3]
          Length = 577

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  LA +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLAGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    +   + +   GV  P       V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVSQPEAQT---VVIDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I   D  V A +T V+
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANI---DESVLANAT-VT 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  ITEDREAQLAARLLQFEETLTVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              +V   RL LA+ TAK +K   D L I T
Sbjct: 546  --SVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 187/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  LA +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLAGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    +   + +   GV  P       V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLASHVDAALKSDRLGVSQPEAQT---VVIDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 186/333 (55%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  LA +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLAGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    +   + +   GV  P       V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVSQPEAQT---VVIDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|268589751|ref|ZP_06123972.1| arginine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314906|gb|EFE55359.1| arginine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 576

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 230/605 (38%), Positives = 340/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMLAA----GAPEDSDALVRQSAKAQFGDYQANGVMGAAKKMGIA-- 54

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+        +L  +  L  +  K+E+A PGF+N+FL   +  + +++ + + 
Sbjct: 55   ---PRQLAE--------QLVNHLDLEGIASKVEIAGPGFINIFLEPAWVEKHVEEALASQ 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGIAPV---KPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDATDMALADLEEFYREAKKHYDEDEEFAVRARGYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   ++ W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTR+G TV+LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMALEHHMFGMMLGKDGKPFKTRTGGTVRLSDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +++KN   ++   EL      V  G +KYADLS NR  DY+F +D ML   GNT
Sbjct: 399  ERAQALIREKN--PDMPEDELLNVANVVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+ASI + A +   DL     + P+SL+  +E ALA  LL+  + ++ V R
Sbjct: 457  APYMQYAYTRVASIFKKANLTHADL-----TLPISLQDPREIALATRLLQFEETILTVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   H +C YLY+++  FS FY++C  +  D E + ++    RL LA  T K +K   D 
Sbjct: 512  DGTPHVMCAYLYELAGLFSGFYEHCPILSADDEAQRQS----RLKLAALTQKTLKTGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIET 572



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 223/422 (52%), Gaps = 35/422 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAILSDKISAAMLAA----GAPEDSDALVRQSAKAQFGDYQANGVMGAAKKMGIA-- 54

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+        +L  +  L  +  K+E+A PGF+N+FL   +  + +++ + + 
Sbjct: 55  ---PRQLAE--------QLVNHLDLEGIASKVEIAGPGFINIFLEPAWVEKHVEEALASQ 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104 RLGIAPV---KPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KVQNEDATDMALADLEEFYREAKKHYDEDEEFAVRARGYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   ++ W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRQMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280 ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R +  ++QA     K   I  S + +       +     P + R      LSD+   AV+
Sbjct: 340 RQHQHLMQAWTIVRKAGYIPESMALEHHMFGMMLGKDGKPFKTRTGGTVRLSDLLDEAVE 399

Query: 491 VA 492
            A
Sbjct: 400 RA 401



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 205/368 (55%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMLAA----GAPEDSDALVRQSAKAQFGDYQANGVMGAAKKMGIA-- 54

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+        +L  +  L  +  K+E+A PGF+N+FL   +  + +++ + + 
Sbjct: 55   ---PRQLAE--------QLVNHLDLEGIASKVEIAGPGFINIFLEPAWVEKHVEEALASQ 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGIAPV---KPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDATDMALADLEEFYREAKKHYDEDEEFAVRARGYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   ++ W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRQMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|317491773|ref|ZP_07950208.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920207|gb|EFV41531.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 576

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/611 (38%), Positives = 341/611 (55%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  T A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQALLSDKVTQALVAA----GAPANSEALVRQSAKAQFGDYQANGVMGAAKKLGIA-- 54

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +         T+  L  +   +E+A PGF+N+FL   +  +Q++  +   
Sbjct: 55   ---PRQLAEQVL--------THLELDGIASNVEIAGPGFINIFLDPAWLAKQVEMALADE 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVAAVKPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNEHANEMDLSDLEAFYREAKKHYDEDAEFAERARAYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   ++ W  + D++    QK Y RLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCREMWRKLVDITMSQNQKNYQRLNVTLTKDDVMGESLYNSMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTRSG T+KLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRSGGTIKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   +L+  EL++  + V  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAVERAGKLIAEKN--PDLSGDELAKLVEVVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR++SI + AGI+ + L     S  + L  ++E ALA  L++  + 
Sbjct: 451  AFEGNTAPYMQYAYTRVSSIFKRAGIDEQSL-----SGNIVLTEDREKALAARLIQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++  FS FY+ C  +  ++E +       RL LA  TA+ +
Sbjct: 506  ITQVAREGTPHVMCTYLYDLAGLFSSFYEACPILTAESEEQ----RNSRLQLAALTARTL 561

Query: 1058 KKCFDILNIRT 1068
            K   D L I T
Sbjct: 562  KTGLDTLGIET 572



 Score =  236 bits (602), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 143/375 (38%), Positives = 205/375 (54%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  T A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQALLSDKVTQALVAA----GAPANSEALVRQSAKAQFGDYQANGVMGAAKKLGIA-- 54

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +         T+  L  +   +E+A PGF+N+FL   +  +Q++  +   
Sbjct: 55  ---PRQLAEQVL--------THLELDGIASNVEIAGPGFINIFLDPAWLAKQVEMALADE 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104 RLGVAAVKPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNEHANEMDLSDLEAFYREAKKHYDEDAEFAERARAYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   ++ W  + D++    QK Y RLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCREMWRKLVDITMSQNQKNYQRLNVTLTKDDVMGESLYNSMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/374 (37%), Positives = 204/374 (54%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  T A+  A    G    S A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQALLSDKVTQALVAA----GAPANSEALVRQSAKAQFGDYQANGVMGAAKKLGIA-- 54

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +         T+  L  +   +E+A PGF+N+FL   +  +Q++  +   
Sbjct: 55   ---PRQLAEQVL--------THLELDGIASNVEIAGPGFINIFLDPAWLAKQVEMALADE 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V  V+P T      ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH+V+R N
Sbjct: 104  RLGVAAVKPQT------IVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNEHANEMDLSDLEAFYREAKKHYDEDAEFAERARAYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   ++ W  + D++    QK Y RLNVTLT+    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCREMWRKLVDITMSQNQKNYQRLNVTLTKDDVMGESLYNSMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|419272863|ref|ZP_13815164.1| arginyl-tRNA synthetase [Escherichia coli DEC10D]
 gi|378117580|gb|EHW79094.1| arginyl-tRNA synthetase [Escherichia coli DEC10D]
          Length = 525

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 222/534 (41%), Positives = 312/534 (58%), Gaps = 32/534 (5%)

Query: 549  VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 605
            +  ++ T+  L  +  K+E+A PGF+N+FL   +  E ++  + +   GV  P   +K  
Sbjct: 6    LAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTP---EKQT 62

Query: 606  VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 665
            ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 63   IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLE 122

Query: 666  DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 725
             +  +   +   +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 123  KQQQENAGEM-ELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVD 181

Query: 726  VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----- 777
            ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++     
Sbjct: 182  ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 241

Query: 778  ---GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
               GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y  D  Q  H      
Sbjct: 242  NKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 298

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
              +KAG + P    ++   FG++LG+D K FKTR+G TVKL++LLDE L R+   + +KN
Sbjct: 299  IVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN 357

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
               ++   EL +   AV  G +KYADLS NR  DY+F +D ML   GNTA Y+ YAYTR+
Sbjct: 358  --PDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRV 415

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
             S+ R A IN E L  A    PV +  ++E  LA  LL+  + L +V R+   H +C YL
Sbjct: 416  LSVFRKAEINEEQLAAA----PVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYL 471

Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YD++  FS FY++C  +  + E     V   RL LA+ TAK +K   D L I T
Sbjct: 472  YDLAGLFSGFYEHCPILSAENE----EVRNSRLKLAQLTAKTLKLGLDTLGIET 521



 Score =  229 bits (584), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/300 (41%), Positives = 180/300 (60%), Gaps = 21/300 (7%)

Query: 159 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 215
           +  ++ T+  L  +  K+E+A PGF+N+FL   +  E ++  + +   GV  P   +K  
Sbjct: 6   LAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTP---EKQT 62

Query: 216 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 275
           ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 63  IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLE 122

Query: 276 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 335
            +  +   +   +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 123 KQQQENAGEM-ELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVD 181

Query: 336 VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----- 387
           ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++     
Sbjct: 182 ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 241

Query: 388 ---GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
              GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 242 NKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWA 298



 Score =  226 bits (577), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/297 (41%), Positives = 178/297 (59%), Gaps = 21/297 (7%)

Query: 1176 VTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLR 1232
            +  ++ T+  L  +  K+E+A PGF+N+FL   +  E ++  + +   GV  P   +K  
Sbjct: 6    LAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTP---EKQT 62

Query: 1233 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 1292
            ++VD+S+PN+AKEMHVGHLRSTIIGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+
Sbjct: 63   IVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLE 122

Query: 1293 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 1352
             +  +   +   +ADL+ FY+++KK +DEDE F +RA   VV LQ  D  +++ W  + D
Sbjct: 123  KQQQENAGEM-ELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVD 181

Query: 1353 VSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----- 1404
            ++    Q  YDRLNVTLT     GES Y   +  +V  L+ KGL    +G  +++     
Sbjct: 182  ITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFK 241

Query: 1405 ---GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
               GE  G I   I K DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 242  NKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYESLHADRVLYYIDSRQHQHLMQ 295


>gi|350571967|ref|ZP_08940279.1| arginine--tRNA ligase [Neisseria wadsworthii 9715]
 gi|349790845|gb|EGZ44743.1| arginine--tRNA ligase [Neisseria wadsworthii 9715]
          Length = 572

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/566 (42%), Positives = 323/566 (57%), Gaps = 43/566 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGDFQ N  M   K       K NP ++AQ +A      LA N     VI+  EVA PGF
Sbjct: 35   FGDFQINGVMGAAK-----QAKTNPRELAQKVADA----LANNA----VIEHAEVAGPGF 81

Query: 574  VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 630
            +N+ L   +    ++  + N   GVQ  T  +   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82   INLRLRAEFLANGLRSALANERLGVQVVT--EPQTVVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 631  DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 690
            D+I+R+L +LGH V+R NHVGDWGTQFGML+A++ ++          ++DL+ FY+E+K 
Sbjct: 140  DSIARVLGFLGHKVIRQNHVGDWGTQFGMLVAYMVEQQKG--NAGFELSDLEQFYREAKI 197

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDED  F   A   VV LQ  D      W+   D+S    Q +YD L + LT     GE
Sbjct: 198  RFDEDAAFADIARDYVVKLQGGDETVLALWKQFVDISLSHAQNVYDALGLLLTPDDVAGE 257

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDL 802
            S Y   ++ +V  L  +GL   DDG K+++ E+     G     IV K  GGF Y ++DL
Sbjct: 258  SKYNNDLQAVVDELTAQGLAVEDDGAKVVFLEEFQNKEGEPAAFIVQKQGGGFLYSSTDL 317

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            A IR R+ +  AD ++YV D  Q +HF+ L   A+KAG L+ N    + + FG ++G+D 
Sbjct: 318  ACIRYRVNQLNADRLLYVVDARQALHFQQLFTVARKAGWLSENVV-AEHIAFGTMMGKDG 376

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            K FKTRSGDTVKL ELLDE + R+   ++DKN   EL     +   + V  G +KYADLS
Sbjct: 377  KPFKTRSGDTVKLVELLDEAVERATALVQDKN--AELDAKAAAGIGRVVGIGAVKYADLS 434

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + PV L   
Sbjct: 435  KNRTSDYVFDWDNMLSFEGNTAPYLQYAYTRVQSVFRRAG------EWDTTAAPV-LNET 487

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
             E  LA  LL+  DVL  V+     H+L  YLY ++T FS FY++C  ++  AEG+++  
Sbjct: 488  LEKQLAVELLKFEDVLDNVSETAYPHYLAAYLYQVATLFSRFYESCPILK--AEGEVRNT 545

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RL LA+ T   +K   ++L I T
Sbjct: 546  ---RLQLAKLTGNTLKTGLELLGIET 568



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/394 (37%), Positives = 207/394 (52%), Gaps = 31/394 (7%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGDFQ N  M   K       K NP ++AQ +A      LA N     VI+  EVA PGF
Sbjct: 35  FGDFQINGVMGAAK-----QAKTNPRELAQKVADA----LANNA----VIEHAEVAGPGF 81

Query: 184 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           +N+ L   +    ++  + N   GVQ  T  +   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82  INLRLRAEFLANGLRSALANERLGVQVVT--EPQTVVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 300
           D+I+R+L +LGH V+R NHVGDWGTQFGML+A++ ++          ++DL+ FY+E+K 
Sbjct: 140 DSIARVLGFLGHKVIRQNHVGDWGTQFGMLVAYMVEQQKG--NAGFELSDLEQFYREAKI 197

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDED  F   A   VV LQ  D      W+   D+S    Q +YD L + LT     GE
Sbjct: 198 RFDEDAAFADIARDYVVKLQGGDETVLALWKQFVDISLSHAQNVYDALGLLLTPDDVAGE 257

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDL 412
           S Y   ++ +V  L  +GL   DDG K+++ E+     G     IV K  GGF Y ++DL
Sbjct: 258 SKYNNDLQAVVDELTAQGLAVEDDGAKVVFLEEFQNKEGEPAAFIVQKQGGGFLYSSTDL 317

Query: 413 AAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NV 469
           A IR R+ +  AD ++YV D R      Q      K   +S +  ++       M     
Sbjct: 318 ACIRYRVNQLNADRLLYVVDARQALHFQQLFTVARKAGWLSENVVAEHIAFGTMMGKDGK 377

Query: 470 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASV 503
           P + R      L ++   AV+ A   + DK A +
Sbjct: 378 PFKTRSGDTVKLVELLDEAVERATALVQDKNAEL 411



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 184/322 (57%), Gaps = 28/322 (8%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGDFQ N  M   K       K NP ++AQ +A      LA N     VI+  EVA PGF
Sbjct: 35   FGDFQINGVMGAAK-----QAKTNPRELAQKVADA----LANNA----VIEHAEVAGPGF 81

Query: 1201 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            +N+ L   +    ++  + N   GVQ  T  +   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82   INLRLRAEFLANGLRSALANERLGVQVVT--EPQTVVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+I+R+L +LGH V+R NHVGDWGTQFGML+A++ ++          ++DL+ FY+E+K 
Sbjct: 140  DSIARVLGFLGHKVIRQNHVGDWGTQFGMLVAYMVEQQKG--NAGFELSDLEQFYREAKI 197

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDED  F   A   VV LQ  D      W+   D+S    Q +YD L + LT     GE
Sbjct: 198  RFDEDAAFADIARDYVVKLQGGDETVLALWKQFVDISLSHAQNVYDALGLLLTPDDVAGE 257

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDL 1429
            S Y   ++ +V  L  +GL   DDG K+++ E+     G     IV K  GGF Y ++DL
Sbjct: 258  SKYNNDLQAVVDELTAQGLAVEDDGAKVVFLEEFQNKEGEPAAFIVQKQGGGFLYSSTDL 317

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            A IR R+ +  AD ++YV D R
Sbjct: 318  ACIRYRVNQLNADRLLYVVDAR 339


>gi|455645932|gb|EMF24975.1| arginyl-tRNA ligase [Citrobacter freundii GTC 09479]
          Length = 577

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L     +  V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDESAL----ANAQVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  INEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA+ TAK +K   D L I T
Sbjct: 546  --EIRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  236 bits (603), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 191/334 (57%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALASDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|90022024|ref|YP_527851.1| arginyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|109895032|sp|Q21I40.1|SYR_SACD2 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|89951624|gb|ABD81639.1| arginyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 579

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 234/604 (38%), Positives = 337/604 (55%), Gaps = 43/604 (7%)

Query: 475  MSVRDYLSDVFTHAVQ-VAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            M++R+ L+D    A+     P   D +  +A + +     FGD+Q N AM   K  K   
Sbjct: 1    MNIRNLLNDRVKSAMNDAGIP--ADYSPHLAVSKKA---GFGDYQANGAMGAAKALK--- 52

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
               NP ++AQ I          N  L  +  K+E+A PGF+N+ L   +  +Q   +  +
Sbjct: 53   --TNPREVAQKIID--------NLDLNGIASKVEIAGPGFINIHLDPKWLAQQTVAVTNS 102

Query: 594  ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
               G+ P   N    V++D+SSPN+AKEMHVGHLRSTIIGD I+R+LE+ G  V+R NHV
Sbjct: 103  TNLGILPK--NNPETVVIDYSSPNLAKEMHVGHLRSTIIGDAIARVLEFTGDKVIRQNHV 160

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIA L+D+          + DL+ FY+++KK FD+D  F  RA   VV LQ
Sbjct: 161  GDWGTQFGMLIAELEDQLGSGERPELALQDLEGFYQQAKKHFDDDPAFADRARDYVVKLQ 220

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 767
              D    K W+    VS    ++IY +LNVTL E   RGES Y   +  +V  LE +GL 
Sbjct: 221  SGDAQVNKLWQEFRRVSLLHAEEIYRKLNVTLGEADVRGESAYNDDLAPVVAELEAQGLA 280

Query: 768  ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              D G K+++     +  G   + I+ K DGG+ Y TSDLAA+R R+   KA+ I+Y  D
Sbjct: 281  VEDQGAKVVFLHELADKNGDPSVAIIQKKDGGYLYSTSDLAALRYRVGTLKANRILYFID 340

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q +H + +   A+KAG  +      +   FG +LG D K FKTRSG TVKL++LLDE 
Sbjct: 341  ARQSLHMQQVFTLARKAGFAD-EWLSTEHHAFGTMLGSDGKPFKTRSGGTVKLAQLLDEA 399

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            + R+  +++ KN   +LT  E++E    V  G +KYADL   R  DYVF+++ ML   GN
Sbjct: 400  VERAAKEVRTKN--PDLTEEEMAEVASKVGIGAVKYADLCKTRTNDYVFNWESMLAFEGN 457

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            T  Y+ YAYTRI SI R A  N +        + V+L   +E  LA  LL++ +++  + 
Sbjct: 458  TGPYMQYAYTRIRSIFRRANENMDTFE-----SEVNLTEPQEVQLAIKLLQLPEIVEQIA 512

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
             D   H +C YLYD+++ F  FY+ C  +++  E  +K   T RL L++  A+ + +  D
Sbjct: 513  ADAYPHVMCNYLYDLASLFMTFYEACPILKEGVEPAVK---TSRLQLSKGVARTLAQGLD 569

Query: 1063 ILNI 1066
            +L I
Sbjct: 570  LLGI 573



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/382 (39%), Positives = 210/382 (54%), Gaps = 35/382 (9%)

Query: 85  MSVRDYLSDVFTHAVQ-VAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           M++R+ L+D    A+     P   D +  +A + +     FGD+Q N AM   K  K   
Sbjct: 1   MNIRNLLNDRVKSAMNDAGIP--ADYSPHLAVSKKA---GFGDYQANGAMGAAKALK--- 52

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
              NP ++AQ I          N  L  +  K+E+A PGF+N+ L   +  +Q   +  +
Sbjct: 53  --TNPREVAQKIID--------NLDLNGIASKVEIAGPGFINIHLDPKWLAQQTVAVTNS 102

Query: 204 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
              G+ P   N    V++D+SSPN+AKEMHVGHLRSTIIGD I+R+LE+ G  V+R NHV
Sbjct: 103 TNLGILPK--NNPETVVIDYSSPNLAKEMHVGHLRSTIIGDAIARVLEFTGDKVIRQNHV 160

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGMLIA L+D+          + DL+ FY+++KK FD+D  F  RA   VV LQ
Sbjct: 161 GDWGTQFGMLIAELEDQLGSGERPELALQDLEGFYQQAKKHFDDDPAFADRARDYVVKLQ 220

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 377
             D    K W+    VS    ++IY +LNVTL E   RGES Y   +  +V  LE +GL 
Sbjct: 221 SGDAQVNKLWQEFRRVSLLHAEEIYRKLNVTLGEADVRGESAYNDDLAPVVAELEAQGLA 280

Query: 378 ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D G K+++     +  G   + I+ K DGG+ Y TSDLAA+R R+   KA+ I+Y  D
Sbjct: 281 VEDQGAKVVFLHELADKNGDPSVAIIQKKDGGYLYSTSDLAALRYRVGTLKANRILYFID 340

Query: 433 HR-SYHQVLQAIAEEEKKQGIS 453
            R S H  +Q +    +K G +
Sbjct: 341 ARQSLH--MQQVFTLARKAGFA 360



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/362 (40%), Positives = 201/362 (55%), Gaps = 32/362 (8%)

Query: 1102 MSVRDYLSDVFTHAVQ-VAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            M++R+ L+D    A+     P   D +  +A + +     FGD+Q N AM   K  K   
Sbjct: 1    MNIRNLLNDRVKSAMNDAGIP--ADYSPHLAVSKKA---GFGDYQANGAMGAAKALK--- 52

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
               NP ++AQ I          N  L  +  K+E+A PGF+N+ L   +  +Q   +  +
Sbjct: 53   --TNPREVAQKIID--------NLDLNGIASKVEIAGPGFINIHLDPKWLAQQTVAVTNS 102

Query: 1221 ---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
               G+ P   N    V++D+SSPN+AKEMHVGHLRSTIIGD I+R+LE+ G  V+R NHV
Sbjct: 103  TNLGILPK--NNPETVVIDYSSPNLAKEMHVGHLRSTIIGDAIARVLEFTGDKVIRQNHV 160

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLIA L+D+          + DL+ FY+++KK FD+D  F  RA   VV LQ
Sbjct: 161  GDWGTQFGMLIAELEDQLGSGERPELALQDLEGFYQQAKKHFDDDPAFADRARDYVVKLQ 220

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 1394
              D    K W+    VS    ++IY +LNVTL E   RGES Y   +  +V  LE +GL 
Sbjct: 221  SGDAQVNKLWQEFRRVSLLHAEEIYRKLNVTLGEADVRGESAYNDDLAPVVAELEAQGLA 280

Query: 1395 ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D G K+++     +  G   + I+ K DGG+ Y TSDLAA+R R+   KA+ I+Y  D
Sbjct: 281  VEDQGAKVVFLHELADKNGDPSVAIIQKKDGGYLYSTSDLAALRYRVGTLKANRILYFID 340

Query: 1450 HR 1451
             R
Sbjct: 341  AR 342


>gi|381394765|ref|ZP_09920477.1| arginyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
 gi|379329732|dbj|GAB55610.1| arginyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
          Length = 580

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 241/606 (39%), Positives = 347/606 (57%), Gaps = 42/606 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELG--DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            M+++  L + FT A+ +    LG  D    VA   +K    FG++Q N AM L K  K  
Sbjct: 1    MNIQQLLVERFTSALNI----LGFTDAPVPVAKNTKK---GFGEYQFNGAMGLAKKLK-- 51

Query: 533  GEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
               +NP DIAQ I   V  S++A+          +E+A PGF+N+ ++ ++   Q+  ++
Sbjct: 52   ---QNPRDIAQQIIDAVDISDMAST---------LEIAGPGFINIHINNMWLSAQLSAVL 99

Query: 592  VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
             +      +     V+VD+S+PN+AKEMHVGHLRSTIIGD + R L +LGH+V+R NH+G
Sbjct: 100  SDKRLGIDIVPAKNVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRCLAFLGHNVIRQNHMG 159

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGML+AHLQDK          ++DL+ FY+E+K RFD +E F   A Q VV LQ 
Sbjct: 160  DWGTQFGMLLAHLQDKLAQDQVAETALSDLEDFYREAKVRFDNEEGFADTARQYVVRLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
             D +    W+   DVS    + IY  L V+L+ +   GES Y   +  +V  L++KG+ +
Sbjct: 220  GDKECLALWKNFIDVSISHSEDIYKTLGVSLSRQDVMGESAYNDDLATVVSILKEKGIAQ 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             D G ++++ +   D+   P   +  KS GG+ Y T+DLAAIR R    +AD  +  TD 
Sbjct: 280  EDAGAQVVFLQELADKNGKPAVYIVQKSGGGYLYATTDLAAIRHRSSVLQADRTLIFTDA 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q +HF+  E  A+KA  + P++       FG++LG+D K FKTR+G TVKL +LLDE +
Sbjct: 340  RQALHFKQTEMVARKANFMQPDEA-YQHCPFGMMLGKDNKPFKTRTGGTVKLIDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+ +KL    R  ++ P +L++ +  +  G +KYADLS NR  DYVF ++ ML   GNT
Sbjct: 399  ERA-EKLV-LGRKPDIDPQQLAQMKSTLGIGAVKYADLSKNRTTDYVFDWNAMLSFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQST-PVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            A YL YAYTRI SI   A     D    AQST  +S+E + E AL   LL+  + L LV 
Sbjct: 457  APYLQYAYTRIQSIFEKAKF---DPAAHAQSTIEMSIEQDAEKALCLHLLQCQNALELVA 513

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
             +   H LC YLY++++ +  FY+ C  ++ D   + K  HT RL L   TA  +K   D
Sbjct: 514  IEATPHILCTYLYELASLYMRFYEACPILKDDVSRQSK--HT-RLSLCVLTASTLKLGLD 570

Query: 1063 ILNIRT 1068
            +L I T
Sbjct: 571  LLGIGT 576



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/361 (39%), Positives = 206/361 (57%), Gaps = 32/361 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELG--DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           M+++  L + FT A+ +    LG  D    VA   +K    FG++Q N AM L K  K  
Sbjct: 1   MNIQQLLVERFTSALNI----LGFTDAPVPVAKNTKK---GFGEYQFNGAMGLAKKLK-- 51

Query: 143 GEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
              +NP DIAQ I   V  S++A+          +E+A PGF+N+ ++ ++   Q+  ++
Sbjct: 52  ---QNPRDIAQQIIDAVDISDMAST---------LEIAGPGFINIHINNMWLSAQLSAVL 99

Query: 202 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
            +      +     V+VD+S+PN+AKEMHVGHLRSTIIGD + R L +LGH+V+R NH+G
Sbjct: 100 SDKRLGIDIVPAKNVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRCLAFLGHNVIRQNHMG 159

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGML+AHLQDK          ++DL+ FY+E+K RFD +E F   A Q VV LQ 
Sbjct: 160 DWGTQFGMLLAHLQDKLAQDQVAETALSDLEDFYREAKVRFDNEEGFADTARQYVVRLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
            D +    W+   DVS    + IY  L V+L+ +   GES Y   +  +V  L++KG+ +
Sbjct: 220 GDKECLALWKNFIDVSISHSEDIYKTLGVSLSRQDVMGESAYNDDLATVVSILKEKGIAQ 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            D G ++++ +   D+   P   +  KS GG+ Y T+DLAAIR R    +AD  +  TD 
Sbjct: 280 EDAGAQVVFLQELADKNGKPAVYIVQKSGGGYLYATTDLAAIRHRSSVLQADRTLIFTDA 339

Query: 434 R 434
           R
Sbjct: 340 R 340



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/361 (39%), Positives = 206/361 (57%), Gaps = 32/361 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELG--DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            M+++  L + FT A+ +    LG  D    VA   +K    FG++Q N AM L K  K  
Sbjct: 1    MNIQQLLVERFTSALNI----LGFTDAPVPVAKNTKK---GFGEYQFNGAMGLAKKLK-- 51

Query: 1160 GEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
               +NP DIAQ I   V  S++A+          +E+A PGF+N+ ++ ++   Q+  ++
Sbjct: 52   ---QNPRDIAQQIIDAVDISDMAST---------LEIAGPGFINIHINNMWLSAQLSAVL 99

Query: 1219 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
             +      +     V+VD+S+PN+AKEMHVGHLRSTIIGD + R L +LGH+V+R NH+G
Sbjct: 100  SDKRLGIDIVPAKNVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRCLAFLGHNVIRQNHMG 159

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGML+AHLQDK          ++DL+ FY+E+K RFD +E F   A Q VV LQ 
Sbjct: 160  DWGTQFGMLLAHLQDKLAQDQVAETALSDLEDFYREAKVRFDNEEGFADTARQYVVRLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
             D +    W+   DVS    + IY  L V+L+ +   GES Y   +  +V  L++KG+ +
Sbjct: 220  GDKECLALWKNFIDVSISHSEDIYKTLGVSLSRQDVMGESAYNDDLATVVSILKEKGIAQ 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             D G ++++ +   D+   P   +  KS GG+ Y T+DLAAIR R    +AD  +  TD 
Sbjct: 280  EDAGAQVVFLQELADKNGKPAVYIVQKSGGGYLYATTDLAAIRHRSSVLQADRTLIFTDA 339

Query: 1451 R 1451
            R
Sbjct: 340  R 340


>gi|343502545|ref|ZP_08740394.1| arginyl-tRNA synthetase [Vibrio tubiashii ATCC 19109]
 gi|418478693|ref|ZP_13047790.1| arginyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
 gi|342814175|gb|EGU49125.1| arginyl-tRNA synthetase [Vibrio tubiashii ATCC 19109]
 gi|384573728|gb|EIF04218.1| arginyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
          Length = 577

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 326/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLEGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADVALADARLGVAAEEQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH VVR NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVVRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVRARNYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+++GL + DDG ++++      +D  ++ + I K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKEQGLAQEDDGAQVVFLDEYKNKDGEAMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PEEVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R++  ++ KN   +L   E +   + VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAIKLIESKN--ADLASEEKANIAKTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YA+TR++SI   AGI+ ++L     S  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAFTRVSSIFAKAGISMDEL-----SGEIKVTEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILSSEDE----SVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 146/402 (36%), Positives = 217/402 (53%), Gaps = 24/402 (5%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLEGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADVALADARLGVAAEEQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH VVR NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVVRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVRARNYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+++GL + DDG ++++      +D  ++ + I K DGGF Y T+D+A 
Sbjct: 262 YNDMLPGIVADLKEQGLAQEDDGAQVVFLDEYKNKDGEAMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   +    S +       +     P 
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPEEVSLEHHAFGMMLGKDGRPF 381

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 513
           + R      L+D+   A + A   +  K A +AS  +  + K
Sbjct: 382 KTRAGGTVRLADLLDEAEERAIKLIESKNADLASEEKANIAK 423



 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLEGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADVALADARLGVAAEEQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH VVR NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVVRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVRARNYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+++GL + DDG ++++      +D  ++ + I K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKEQGLAQEDDGAQVVFLDEYKNKDGEAMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|330001087|ref|ZP_08303897.1| arginine--tRNA ligase, partial [Klebsiella sp. MS 92-3]
 gi|328537789|gb|EGF63987.1| arginine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 561

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 322/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 19   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 65

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 66   FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 122

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 123  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 181

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 182  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 241

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 242  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 298

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 299  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 357

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL    + V  G +KY
Sbjct: 358  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELENLAKVVGIGAVKY 415

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AGI+      A    PV 
Sbjct: 416  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDEN----AMIDAPVV 471

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 472  IAEDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 529

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 530  --ETRNSRLKLALLTAKTLKLGLDTLGIET 557



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 190/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 19  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 65

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 66  FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 122

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 123 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 181

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 182 KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 241

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 242 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 298

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 299 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 332



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 19   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 65

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 66   FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 122

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 123  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 181

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 182  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 241

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 242  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 298

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 299  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 331


>gi|162455942|ref|YP_001618309.1| arginyl-tRNA synthetase [Sorangium cellulosum So ce56]
 gi|161166524|emb|CAN97829.1| argS [Sorangium cellulosum So ce56]
          Length = 577

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 329/597 (55%), Gaps = 44/597 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L+  F  A+  AF   G + A+V  +  +  H   D+Q N AMAL K        + P +
Sbjct: 8    LARAFQAAITTAF---GAEHAAVDPSLRRSTHA--DYQANAAMALGKRLG-----RPPRE 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG---VQP 597
            +A +I + +         L  +  K+E+A PGFVN+ L   Y   ++ +    G   + P
Sbjct: 58   VAAAIVAAL--------ELDGICRKVEIAGPGFVNLTLEDAYLTRELAETAGGGRLGIAP 109

Query: 598  PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
                +   V+VD+S PN AKEMHVGHLRSTIIGD ++R+LE LGH V+R NH+GDWGT F
Sbjct: 110  AAEPET--VIVDYSGPNAAKEMHVGHLRSTIIGDALARVLEALGHRVIRQNHLGDWGTPF 167

Query: 658  GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            GMLI H+ D      ++   + DL AFY++++ +FD D  F +R+ + VV LQ  D    
Sbjct: 168  GMLIEHMLDLGEAAASQELSVGDLNAFYRQARAKFDGDAAFAERSRRRVVRLQGGDEQTL 227

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
              W  +   S R F  +Y RL VTLT+    GESFY   +  +V  L +KGL    +G  
Sbjct: 228  ALWRQLVRESTRYFDSVYRRLGVTLTDADFAGESFYNPMLPDVVEELGRKGLARESEGAL 287

Query: 775  IMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
             ++     G+    +P+ + K DGG+ Y T+DLAAIR R+    A  IVYV    Q  HF
Sbjct: 288  CVFPAGFTGKGGEPLPLIVRKQDGGYGYATTDLAAIRHRLTTVGARRIVYVVGAPQSQHF 347

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
             ++   A++AG L P   R + V FG VLG D+K FKTRSGDTVKLS+L+DE   R+   
Sbjct: 348  AMVFATAREAGWLTP-PARAEHVAFGSVLGADKKMFKTRSGDTVKLSDLIDEATERAAKV 406

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            +++KN   +L         ++V  G +KYADLS +R  DYVF +D+ML   GNTA YL+Y
Sbjct: 407  VREKN--PDLDAEAADAVARSVGVGAVKYADLSSDRIKDYVFDWDRMLAFEGNTAPYLMY 464

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            A+ RI SI R AG+ S       +   + L    E ALA  LLR   VL  V   L  H 
Sbjct: 465  AHARIRSIFRKAGVESP------REAGIVLSEPAERALALELLRFGAVLEDVAATLEPHR 518

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            LC YL++++ +F+ FY+ C  +  +++     V   RL L + TA+V+ K   +L I
Sbjct: 519  LCGYLFELAGSFTSFYERCPVLRAESD----DVRRSRLALCDLTAEVLAKGLGLLGI 571



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/351 (38%), Positives = 191/351 (54%), Gaps = 31/351 (8%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L+  F  A+  AF   G + A+V  +  +  H   D+Q N AMAL K        + P +
Sbjct: 8   LARAFQAAITTAF---GAEHAAVDPSLRRSTHA--DYQANAAMALGKRLG-----RPPRE 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG---VQP 207
           +A +I + +         L  +  K+E+A PGFVN+ L   Y   ++ +    G   + P
Sbjct: 58  VAAAIVAAL--------ELDGICRKVEIAGPGFVNLTLEDAYLTRELAETAGGGRLGIAP 109

Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
               +   V+VD+S PN AKEMHVGHLRSTIIGD ++R+LE LGH V+R NH+GDWGT F
Sbjct: 110 AAEPET--VIVDYSGPNAAKEMHVGHLRSTIIGDALARVLEALGHRVIRQNHLGDWGTPF 167

Query: 268 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           GMLI H+ D      ++   + DL AFY++++ +FD D  F +R+ + VV LQ  D    
Sbjct: 168 GMLIEHMLDLGEAAASQELSVGDLNAFYRQARAKFDGDAAFAERSRRRVVRLQGGDEQTL 227

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
             W  +   S R F  +Y RL VTLT+    GESFY   +  +V  L +KGL    +G  
Sbjct: 228 ALWRQLVRESTRYFDSVYRRLGVTLTDADFAGESFYNPMLPDVVEELGRKGLARESEGAL 287

Query: 385 IMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
            ++     G+    +P+ + K DGG+ Y T+DLAAIR R+    A  IVYV
Sbjct: 288 CVFPAGFTGKGGEPLPLIVRKQDGGYGYATTDLAAIRHRLTTVGARRIVYV 338



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/351 (38%), Positives = 191/351 (54%), Gaps = 31/351 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L+  F  A+  AF   G + A+V  +  +  H   D+Q N AMAL K        + P +
Sbjct: 8    LARAFQAAITTAF---GAEHAAVDPSLRRSTHA--DYQANAAMALGKRLG-----RPPRE 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG---VQP 1224
            +A +I + +         L  +  K+E+A PGFVN+ L   Y   ++ +    G   + P
Sbjct: 58   VAAAIVAAL--------ELDGICRKVEIAGPGFVNLTLEDAYLTRELAETAGGGRLGIAP 109

Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
                +   V+VD+S PN AKEMHVGHLRSTIIGD ++R+LE LGH V+R NH+GDWGT F
Sbjct: 110  AAEPET--VIVDYSGPNAAKEMHVGHLRSTIIGDALARVLEALGHRVIRQNHLGDWGTPF 167

Query: 1285 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            GMLI H+ D      ++   + DL AFY++++ +FD D  F +R+ + VV LQ  D    
Sbjct: 168  GMLIEHMLDLGEAAASQELSVGDLNAFYRQARAKFDGDAAFAERSRRRVVRLQGGDEQTL 227

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
              W  +   S R F  +Y RL VTLT+    GESFY   +  +V  L +KGL    +G  
Sbjct: 228  ALWRQLVRESTRYFDSVYRRLGVTLTDADFAGESFYNPMLPDVVEELGRKGLARESEGAL 287

Query: 1402 IMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
             ++     G+    +P+ + K DGG+ Y T+DLAAIR R+    A  IVYV
Sbjct: 288  CVFPAGFTGKGGEPLPLIVRKQDGGYGYATTDLAAIRHRLTTVGARRIVYV 338


>gi|444427750|ref|ZP_21223120.1| arginyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
 gi|444238997|gb|ELU50578.1| arginyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
          Length = 577

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/602 (37%), Positives = 337/602 (55%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  ++D  + A++      G    S A+  +    +FGD+Q N  M + K       
Sbjct: 1    MNIQALINDKVSQALEAT----GAPAGSPAAVRQSAKPQFGDYQANGVMGVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP + AQ +  V+         L  +  K E+A PGF+N+FLS  +  +Q +  + + 
Sbjct: 53   -TNPREFAQKVLDVL--------DLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADS 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                  ++   ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+GDWG
Sbjct: 104  RLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+    +    S  +ADL+ FY+ESKK +DEDE F  +A   VV LQ  D 
Sbjct: 164  TQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKARNYVVKLQSGDE 223

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 771
               + W+ + DV+    Q+ YDRLNV+L+     GES Y   + ++V  L+ +GL   DD
Sbjct: 224  FCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQGLAVEDD 283

Query: 772  GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G ++++ E     D  ++ + + K DGGF Y T+D+A  + R EE  AD ++Y  D  Q 
Sbjct: 284  GAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQH 343

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
             H        +KAG + P    ++   FG++LG+D K FKTR+G TV+L++LLDE   R+
Sbjct: 344  QHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKPFKTRAGGTVRLADLLDEAEVRA 402

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               ++ KN   EL   E       VA   +KYADLS +R  DYVF +D ML   GNTA Y
Sbjct: 403  AQLIESKN--PELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPY 460

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            + YAYTR+AS+   AGI+ +DL+       + +  EKE AL   L++  + +  V R+  
Sbjct: 461  MQYAYTRVASVFAKAGISMDDLQ-----GEIKITDEKEKALIAKLMQFEEAVQSVAREGQ 515

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H +C YL++++  FS FY+ C  +  + E     V   RL LA  TAK +K+   +L I
Sbjct: 516  PHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQSRLKLAALTAKTIKQGLSLLGI 571

Query: 1067 RT 1068
             T
Sbjct: 572  DT 573



 Score =  248 bits (632), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/366 (37%), Positives = 209/366 (57%), Gaps = 25/366 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  ++D  + A++      G    S A+  +    +FGD+Q N  M + K       
Sbjct: 1   MNIQALINDKVSQALEAT----GAPAGSPAAVRQSAKPQFGDYQANGVMGVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP + AQ +  V+         L  +  K E+A PGF+N+FLS  +  +Q +  + + 
Sbjct: 53  -TNPREFAQKVLDVL--------DLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADS 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                 ++   ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+GDWG
Sbjct: 104 RLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+    +    S  +ADL+ FY+ESKK +DEDE F  +A   VV LQ  D 
Sbjct: 164 TQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKARNYVVKLQSGDE 223

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 381
              + W+ + DV+    Q+ YDRLNV+L+     GES Y   + ++V  L+ +GL   DD
Sbjct: 224 FCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQGLAVEDD 283

Query: 382 GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G ++++ E     D  ++ + + K DGGF Y T+D+A  + R EE  AD ++Y  D R +
Sbjct: 284 GAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQH 343

Query: 437 HQVLQA 442
             ++QA
Sbjct: 344 QHLMQA 349



 Score =  246 bits (628), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 136/365 (37%), Positives = 208/365 (56%), Gaps = 25/365 (6%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  ++D  + A++      G    S A+  +    +FGD+Q N  M + K       
Sbjct: 1    MNIQALINDKVSQALEAT----GAPAGSPAAVRQSAKPQFGDYQANGVMGVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP + AQ +  V+         L  +  K E+A PGF+N+FLS  +  +Q +  + + 
Sbjct: 53   -TNPREFAQKVLDVL--------DLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADS 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                  ++   ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+GDWG
Sbjct: 104  RLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+    +    S  +ADL+ FY+ESKK +DEDE F  +A   VV LQ  D 
Sbjct: 164  TQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKARNYVVKLQSGDE 223

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 1398
               + W+ + DV+    Q+ YDRLNV+L+     GES Y   + ++V  L+ +GL   DD
Sbjct: 224  FCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQGLAVEDD 283

Query: 1399 GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 1453
            G ++++ E     D  ++ + + K DGGF Y T+D+A  + R EE  AD ++Y  D R +
Sbjct: 284  GAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQH 343

Query: 1454 HQVLQ 1458
              ++Q
Sbjct: 344  QHLMQ 348


>gi|365539316|ref|ZP_09364491.1| arginyl-tRNA synthetase [Vibrio ordalii ATCC 33509]
          Length = 578

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 222/565 (39%), Positives = 327/565 (57%), Gaps = 34/565 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +     T   +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEAFLAKQADIALADEHLGVTKEAQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK-SPPIADLQAFYKESKKR 691
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +   + S  ++DL+AFY+ESKK 
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGNEVSMELSDLEAFYRESKKL 201

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 748
            +DEDE+F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES
Sbjct: 202  YDEDEVFAAKARNYVVKLQSGDEFCAQMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGES 261

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLA 803
             Y   +  +V  L++KGL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A
Sbjct: 262  MYNDMLPGIVADLKEKGLAQEDDGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIA 321

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
              + R E   AD ++Y  D  Q  H        +KAG + P K  ++   FG++LG+D +
Sbjct: 322  CAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PEKVTLEHHAFGMMLGKDGR 380

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTR+G TV+L++LLDE   R+   ++ KN   +L   E +     VA   +KYADLS 
Sbjct: 381  PFKTRAGGTVRLADLLDEAQERAAKLIESKN--PDLDAAEKANIANTVAMAAVKYADLSK 438

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            +R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L     +  + +  EK
Sbjct: 439  HRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVSMDNL-----TGEIKVTQEK 493

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V 
Sbjct: 494  EKALIAKLLQFEEAVQAVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----SVK 549

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL LA  TAK +K+   +L I T
Sbjct: 550  QSRLKLAALTAKTIKQGLSLLGIDT 574



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/329 (40%), Positives = 196/329 (59%), Gaps = 22/329 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +     T   +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEAFLAKQADIALADEHLGVTKEAQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK-SPPIADLQAFYKESKKR 301
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +   + S  ++DL+AFY+ESKK 
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGNEVSMELSDLEAFYRESKKL 201

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 358
           +DEDE+F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES
Sbjct: 202 YDEDEVFAAKARNYVVKLQSGDEFCAQMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGES 261

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLA 413
            Y   +  +V  L++KGL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A
Sbjct: 262 MYNDMLPGIVADLKEKGLAQEDDGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIA 321

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
             + R E   AD ++Y  D R +  ++QA
Sbjct: 322 CAKYRYETLGADRVLYFIDSRQHQHLMQA 350



 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 195/328 (59%), Gaps = 22/328 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +     T   +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEAFLAKQADIALADEHLGVTKEAQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK-SPPIADLQAFYKESKKR 1318
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +   + S  ++DL+AFY+ESKK 
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGNEVSMELSDLEAFYRESKKL 201

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 1375
            +DEDE+F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES
Sbjct: 202  YDEDEVFAAKARNYVVKLQSGDEFCAQMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGES 261

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLA 1430
             Y   +  +V  L++KGL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A
Sbjct: 262  MYNDMLPGIVADLKEKGLAQEDDGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIA 321

Query: 1431 AIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
              + R E   AD ++Y  D R +  ++Q
Sbjct: 322  CAKYRYETLGADRVLYFIDSRQHQHLMQ 349


>gi|365849953|ref|ZP_09390421.1| arginine--tRNA ligase [Yokenella regensburgei ATCC 43003]
 gi|364568278|gb|EHM45923.1| arginine--tRNA ligase [Yokenella regensburgei ATCC 43003]
          Length = 577

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 225/567 (39%), Positives = 322/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+ +L  +  ++E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVI--------THLNLDGIASRVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E +   + +     T  +   +++D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVNAALASERLGVTRPEPQTIVIDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R  E+LGH V+R NHVGDWGTQFGMLIA+L+ +  +       +ADL+ FY+E+KK +
Sbjct: 142  SVRTQEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQEN-AGDMELADLEGFYREAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEAFAERARSYVVKLQGGDEYFRQMWRKLVDITMSQNQLTYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEAMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AGI    L  A+    V ++ 
Sbjct: 435  SKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIEERALTNAS----VVIKE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E     
Sbjct: 491  DREAQLAARLLQFEETLNVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +   RL LA  TAK +K   D L I T
Sbjct: 547  IRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 188/331 (56%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+ +L  +  ++E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVI--------THLNLDGIASRVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E +   + +     T  +   +++D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLAEHVNAALASERLGVTRPEPQTIVIDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R  E+LGH V+R NHVGDWGTQFGMLIA+L+ +  +       +ADL+ FY+E+KK +
Sbjct: 142 SVRTQEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQEN-AGDMELADLEGFYREAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEAFAERARSYVVKLQGGDEYFRQMWRKLVDITMSQNQLTYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEAMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/330 (38%), Positives = 187/330 (56%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+ +L  +  ++E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVI--------THLNLDGIASRVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E +   + +     T  +   +++D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVNAALASERLGVTRPEPQTIVIDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R  E+LGH V+R NHVGDWGTQFGMLIA+L+ +  +       +ADL+ FY+E+KK +
Sbjct: 142  SVRTQEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQEN-AGDMELADLEGFYREAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEAFAERARSYVVKLQGGDEYFRQMWRKLVDITMSQNQLTYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEAMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|293395793|ref|ZP_06640075.1| arginine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421730|gb|EFE94977.1| arginine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 576

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/611 (37%), Positives = 340/611 (55%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQALLSEKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +     +   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDIATKVEIAGPGFINIFLTPAWVAQHADAALRAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               +  V+P T      +++D+S+PN+AKEMHVGH+RSTIIGD  +R  E+LGH V+R N
Sbjct: 104  KLGIAPVEPQT------IVIDYSAPNVAKEMHVGHVRSTIIGDAAARTQEFLGHKVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASEMGLSDLEQFYREAKKHYDEDAQFAERARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D      W  + +++    Q +Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDQYCLGMWRKLVNITMAQNQLVYNRLNVTLTEDDVMGESLYNAMLPGIVEDLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D K FKTRSG T+KLS+
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRSGGTIKLSD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   + +KN   ++   EL++   AV  G +KYADLS +R  DY+F +D ML
Sbjct: 393  LLDEAIERAAKLIAEKN--PDMPADELNKVVNAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+AS+ + AG++   L     + P+ +  E+E ALA  LL+  + 
Sbjct: 451  SFEGNTAPYMQYAYTRVASVFKRAGVDENAL-----TLPLVMTEEREIALATRLLQFEET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            L +V R+   H +C YLYD++  FS FY++C  +  D+E   ++    RL LA  TAK +
Sbjct: 506  LTVVAREGTPHVMCSYLYDVAGLFSSFYEHCQILNADSEAARQS----RLKLALLTAKTL 561

Query: 1058 KKCFDILNIRT 1068
            K   D L I T
Sbjct: 562  KTGLDTLGIDT 572



 Score =  223 bits (568), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 202/375 (53%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQALLSEKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +     +   
Sbjct: 53  -MPPRQLAEKVVQLL--------DLGDIATKVEIAGPGFINIFLTPAWVAQHADAALRAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              +  V+P T      +++D+S+PN+AKEMHVGH+RSTIIGD  +R  E+LGH V+R N
Sbjct: 104 KLGIAPVEPQT------IVIDYSAPNVAKEMHVGHVRSTIIGDAAARTQEFLGHKVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASEMGLSDLEQFYREAKKHYDEDAQFAERARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D      W  + +++    Q +Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDQYCLGMWRKLVNITMAQNQLVYNRLNVTLTEDDVMGESLYNAMLPGIVEDLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/374 (35%), Positives = 201/374 (53%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+  A    G      A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQALLSEKVSQALIAA----GAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +  ++         L  +  K+E+A PGF+N+FL+  +  +     +   
Sbjct: 53   -MPPRQLAEKVVQLL--------DLGDIATKVEIAGPGFINIFLTPAWVAQHADAALRAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               +  V+P T      +++D+S+PN+AKEMHVGH+RSTIIGD  +R  E+LGH V+R N
Sbjct: 104  KLGIAPVEPQT------IVIDYSAPNVAKEMHVGHVRSTIIGDAAARTQEFLGHKVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ K  +       ++DL+ FY+E+KK +DED  F +RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLE-KMQNENASEMGLSDLEQFYREAKKHYDEDAQFAERARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D      W  + +++    Q +Y+RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDQYCLGMWRKLVNITMAQNQLVYNRLNVTLTEDDVMGESLYNAMLPGIVEDLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E   AD +
Sbjct: 277  LAVESEGATVVFLDEYKNKDGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLGADRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|157963591|ref|YP_001503625.1| arginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083549|sp|A8H953.1|SYR_SHEPA RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|157848591|gb|ABV89090.1| arginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 581

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/563 (40%), Positives = 330/563 (58%), Gaps = 35/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K        KNP ++AQ         L  N   +  ++K+E+A PGF+
Sbjct: 41   GDFATNLAMMLTK-----AAGKNPRELAQL--------LIDNLPESSHVEKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F+       Q+   + +      L     V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDNALANQLMAALNSDTLGIELPASQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 693
            R LE++GH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148  RALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAKMELSDLETFYRAAKVRFD 207

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E E F  RA + VVALQ  D    K W    D+S     ++Y+RL V+LT    RGES Y
Sbjct: 208  ESEEFATRARKLVVALQSGDEYCNKLWREFNDISLSHCHELYERLGVSLTRADVRGESAY 267

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 805
               + Q+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGG+ Y TSDLAA+
Sbjct: 268  NSDLAQVVADLDSQGLLSESNGAKVVFQDEFKNKEGEPLPVIIQKADGGYLYATSDLAAM 327

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R     AD  +Y  DL Q +HF+ + + AK A  +    +  + +GFG + GED + F
Sbjct: 328  RYRSNVLNADRALYFVDLRQALHFQQVFKLAKTAKFVREEMS-FEHMGFGTMNGEDGRPF 386

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSG  VKL +LL E   R+LD ++ KN   ++   EL+E  + V    +KYADLS NR
Sbjct: 387  KTRSGGVVKLIDLLKEADIRALDLVRSKN--PDMDEAELAEIARVVGIASVKYADLSKNR 444

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY+FSF++ML   GNTA YLLYAYTR+A I + A    +D+ ++     + LEHEKE 
Sbjct: 445  ASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA----QDVDLS--DAKIILEHEKEK 498

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             L   L +  +V+  +      H LC YL++++ AFS FY+ C  +  + E   K+    
Sbjct: 499  DLGTKLAQFGEVMARMVSKGQPHALCGYLFELAGAFSSFYEACPVLAAETEELKKS---- 554

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RLLL++ TAK +K+  ++L + T
Sbjct: 555  RLLLSQLTAKTLKQGLNLLGLET 577



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/329 (40%), Positives = 190/329 (57%), Gaps = 25/329 (7%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K        KNP ++AQ         L  N   +  ++K+E+A PGF+
Sbjct: 41  GDFATNLAMMLTK-----AAGKNPRELAQL--------LIDNLPESSHVEKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F+       Q+   + +      L     V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88  NFFIDDNALANQLMAALNSDTLGIELPASQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 303
           R LE++GH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148 RALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAKMELSDLETFYRAAKVRFD 207

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E E F  RA + VVALQ  D    K W    D+S     ++Y+RL V+LT    RGES Y
Sbjct: 208 ESEEFATRARKLVVALQSGDEYCNKLWREFNDISLSHCHELYERLGVSLTRADVRGESAY 267

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 415
              + Q+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGG+ Y TSDLAA+
Sbjct: 268 NSDLAQVVADLDSQGLLSESNGAKVVFQDEFKNKEGEPLPVIIQKADGGYLYATSDLAAM 327

Query: 416 RQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           R R     AD  +Y  D R    + QV +
Sbjct: 328 RYRSNVLNADRALYFVDLRQALHFQQVFK 356



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/329 (40%), Positives = 190/329 (57%), Gaps = 25/329 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K        KNP ++AQ         L  N   +  ++K+E+A PGF+
Sbjct: 41   GDFATNLAMMLTK-----AAGKNPRELAQL--------LIDNLPESSHVEKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F+       Q+   + +      L     V+VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDDNALANQLMAALNSDTLGIELPASQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 1320
            R LE++GH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148  RALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAKMELSDLETFYRAAKVRFD 207

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E E F  RA + VVALQ  D    K W    D+S     ++Y+RL V+LT    RGES Y
Sbjct: 208  ESEEFATRARKLVVALQSGDEYCNKLWREFNDISLSHCHELYERLGVSLTRADVRGESAY 267

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 1432
               + Q+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGG+ Y TSDLAA+
Sbjct: 268  NSDLAQVVADLDSQGLLSESNGAKVVFQDEFKNKEGEPLPVIIQKADGGYLYATSDLAAM 327

Query: 1433 RQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            R R     AD  +Y  D R    + QV +
Sbjct: 328  RYRSNVLNADRALYFVDLRQALHFQQVFK 356


>gi|260914195|ref|ZP_05920668.1| arginine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631828|gb|EEX50006.1| arginine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 597

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 224/596 (37%), Positives = 341/596 (57%), Gaps = 33/596 (5%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  + +H +Q A   +G      A   +    +FGD+Q N  MA  K         NP +
Sbjct: 23   IQSILSHRIQQAMIAVGADKNVDALVRQSSKAQFGDYQANGIMAAAK-----KAGYNPRE 77

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
             A+ +   +         L  + +KIE+A PGF+N+FL + +  E +++ + +     T+
Sbjct: 78   FAEKVIQQL--------DLNGIAEKIELAGPGFINIFLDKHWLAENVQNALNDEKLGITV 129

Query: 601  NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 660
             +K  V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQFGML
Sbjct: 130  TEKQTVVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGML 189

Query: 661  IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
            IA+L+ K  +       ++DL+AFY+ +K+ +D D  F ++A   VV LQ  D   +  W
Sbjct: 190  IAYLE-KMENENASEMELSDLEAFYRAAKEHYDSDPEFAEKARNYVVKLQGGDEYCRTMW 248

Query: 721  EMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 777
            + + D++ +  Q+ Y+RLNVTLTE+   GES Y   +  +V  L+K+ L   D+G  +++
Sbjct: 249  KKLVDITMQQNQQNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKRHLAVEDEGALVVY 308

Query: 778  -----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
                  +D  ++ + + K DGGF Y T+D+AA + R E   AD  +  +D  Q  H +  
Sbjct: 309  LDEFKNKDGEAMGVIVQKKDGGFLYTTTDIAAAKYRYETLNADRALVFSDTRQSQHMQQA 368

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
                +KAG + P+  +++   FG++LG+D K FKTR+G TVKL++LLDE + R+   + +
Sbjct: 369  WLITRKAGYV-PDNFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQLINE 427

Query: 893  KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
            K+  T L+  E +   +AVA G +KYADLS NR  DY+F +D ML   GNTA Y+ YAYT
Sbjct: 428  KS--TALSEQEKAAVIEAVAIGSVKYADLSKNRTTDYIFDWDNMLSFEGNTAPYMQYAYT 485

Query: 953  RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
            RI SI   + I+   L    Q   +    EKE  LA  LL+  + + +V ++   H LC 
Sbjct: 486  RIRSIFNRSDISESQL----QQATLKFADEKERVLAVKLLQFEEAVQVVAKEGSPHILCT 541

Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            YLY+++  FS FY++C  +  + E     V   RL LA  T K +K+   +L I+T
Sbjct: 542  YLYELAGVFSSFYEHCPILNNEDE----NVKMSRLKLALLTEKTLKQGLTLLGIKT 593



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/425 (33%), Positives = 229/425 (53%), Gaps = 25/425 (5%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  + +H +Q A   +G      A   +    +FGD+Q N  MA  K         NP +
Sbjct: 23  IQSILSHRIQQAMIAVGADKNVDALVRQSSKAQFGDYQANGIMAAAK-----KAGYNPRE 77

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 210
            A+ +   +         L  + +KIE+A PGF+N+FL + +  E +++ + +     T+
Sbjct: 78  FAEKVIQQL--------DLNGIAEKIELAGPGFINIFLDKHWLAENVQNALNDEKLGITV 129

Query: 211 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 270
            +K  V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQFGML
Sbjct: 130 TEKQTVVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGML 189

Query: 271 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 330
           IA+L+ K  +       ++DL+AFY+ +K+ +D D  F ++A   VV LQ  D   +  W
Sbjct: 190 IAYLE-KMENENASEMELSDLEAFYRAAKEHYDSDPEFAEKARNYVVKLQGGDEYCRTMW 248

Query: 331 EMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 387
           + + D++ +  Q+ Y+RLNVTLTE+   GES Y   +  +V  L+K+ L   D+G  +++
Sbjct: 249 KKLVDITMQQNQQNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKRHLAVEDEGALVVY 308

Query: 388 -----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
                 +D  ++ + + K DGGF Y T+D+AA + R E   AD  +  +D R    + QA
Sbjct: 309 LDEFKNKDGEAMGVIVQKKDGGFLYTTTDIAAAKYRYETLNADRALVFSDTRQSQHMQQA 368

Query: 443 IAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDK 499
                K   +  +   + K     +     P + R      L+D+   AV+ A   + +K
Sbjct: 369 WLITRKAGYVPDNFQLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAVERATQLINEK 428

Query: 500 TASVA 504
           + +++
Sbjct: 429 STALS 433



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 131/359 (36%), Positives = 204/359 (56%), Gaps = 22/359 (6%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  + +H +Q A   +G      A   +    +FGD+Q N  MA  K         NP +
Sbjct: 23   IQSILSHRIQQAMIAVGADKNVDALVRQSSKAQFGDYQANGIMAAAK-----KAGYNPRE 77

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
             A+ +   +         L  + +KIE+A PGF+N+FL + +  E +++ + +     T+
Sbjct: 78   FAEKVIQQL--------DLNGIAEKIELAGPGFINIFLDKHWLAENVQNALNDEKLGITV 129

Query: 1228 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 1287
             +K  V+ D+SSPN+AKEMHVGHLRSTIIGD + R LE+LG+ V+R NHVGDWGTQFGML
Sbjct: 130  TEKQTVVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGML 189

Query: 1288 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            IA+L+ K  +       ++DL+AFY+ +K+ +D D  F ++A   VV LQ  D   +  W
Sbjct: 190  IAYLE-KMENENASEMELSDLEAFYRAAKEHYDSDPEFAEKARNYVVKLQGGDEYCRTMW 248

Query: 1348 EMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 1404
            + + D++ +  Q+ Y+RLNVTLTE+   GES Y   +  +V  L+K+ L   D+G  +++
Sbjct: 249  KKLVDITMQQNQQNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKRHLAVEDEGALVVY 308

Query: 1405 -----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
                  +D  ++ + + K DGGF Y T+D+AA + R E   AD  +  +D R    + Q
Sbjct: 309  LDEFKNKDGEAMGVIVQKKDGGFLYTTTDIAAAKYRYETLNADRALVFSDTRQSQHMQQ 367


>gi|365971090|ref|YP_004952651.1| arginyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
 gi|365750003|gb|AEW74230.1| Arginyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
          Length = 577

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 320/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    +   + +   GV  P       V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLARHVDAALKSDRLGVSQPEAQT---VVIDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DED+ F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDDAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L     +  V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKASIDESAL----ANAEVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  ISEDREAQLAARLLQFEETLAVVARDGTPHVMCSYLYDLAGLFSGFYEHCPILSAESEA- 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 547  ---VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 187/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    +   + +   GV  P       V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLARHVDAALKSDRLGVSQPEAQT---VVIDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DED+ F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDDAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 186/333 (55%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    +   + +   GV  P       V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLARHVDAALKSDRLGVSQPEAQT---VVIDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DED+ F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDDAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|296101787|ref|YP_003611933.1| arginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
            13047]
 gi|295056246|gb|ADF60984.1| arginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
            13047]
          Length = 577

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 231/570 (40%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    +   + +   GV  P   +   V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVAQP---EPQTVVIDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKHLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDCVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPAEELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I   D  V A +T V+
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANI---DESVLANAT-VT 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  ITEDREAQLAARLLQFEETLSVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              +V   RL LA+ TAK +K   D L I T
Sbjct: 546  --SVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 188/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    +   + +   GV  P   +   V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLASHVDAALKSDRLGVAQP---EPQTVVIDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKHLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  229 bits (584), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 187/333 (56%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    +   + +   GV  P   +   V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVAQP---EPQTVVIDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  DP + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKHLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|323493320|ref|ZP_08098443.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312406|gb|EGA65547.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 577

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 224/564 (39%), Positives = 325/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLEGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADSRLGVAAEEQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    D    S  +ADL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQDSGEVSMELADLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCGEMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++K L   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLPGIVADLKQKELAVEDDGAQVVFLEEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PEEVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   +L   E  +    VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAAKLIESKN--PDLAADEKEKISTTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR++SI   AGI+ ++L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVSSIFAKAGISMDNL-----TGEIKVTDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+ ++ +  V R+   H +C YL++++  FS FY+ C  +  + E    TV  
Sbjct: 494  KALIAKLLQFDEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILNTEDE----TVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLEGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADAALADSRLGVAAEEQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    D    S  +ADL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQDSGEVSMELADLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCGEMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++K L   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNHMLPGIVADLKQKELAVEDDGAQVVFLEEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQA 349



 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/327 (40%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLEGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADSRLGVAAEEQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    D    S  +ADL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQDSGEVSMELADLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCGEMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++K L   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLPGIVADLKQKELAVEDDGAQVVFLEEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|192359863|ref|YP_001982872.1| arginyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692459|sp|B3PKE3.1|SYR_CELJU RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|190686028|gb|ACE83706.1| arginyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 579

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/602 (39%), Positives = 339/602 (56%), Gaps = 39/602 (6%)

Query: 475  MSVRDYLSD-VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            M++RD L+  V         P   D  A +A   +     FGD+Q N AM   K      
Sbjct: 1    MNIRDLLNQRVLAAMATCGVP--ADLPALIAPGKKA---GFGDYQANGAMGAAKAMG--- 52

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
               NP D+A  I + +         L  + DK+E+A PGF+N++L   + G+QI     +
Sbjct: 53   --TNPRDLAGKIVAAL--------DLEGIADKLEIAGPGFINIYLKPAWLGKQIALAQTD 102

Query: 594  G-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
              +  P       V++D+S PN+AKEMHVGHLRSTIIGD+++RLLE+LGH V+R NHVGD
Sbjct: 103  ARLAVPQAEHAQTVVIDYSGPNLAKEMHVGHLRSTIIGDSLARLLEFLGHQVIRQNHVGD 162

Query: 653  WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            WGTQFGMLIA L+++       +  + DL+ FY+++KK FD+D  F  +A   VV LQ  
Sbjct: 163  WGTQFGMLIAELEEQLGAKGDAALELKDLEVFYQQAKKHFDDDAAFADKARDYVVRLQGG 222

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLEL 769
            D    K W+   D+S     +IY +LNVTLT+   RGESFY   +  LV  L+ +GL   
Sbjct: 223  DAQMLKLWQQFKDISLHHSSEIYQQLNVTLTDADVRGESFYNDDLAPLVKALQDQGLAVE 282

Query: 770  DDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLG 824
             +G ++++      +D    P+ I K  GGF Y T+DLAA+R R+    A  I+Y  D  
Sbjct: 283  SEGAQVVFLPELADKDGNPSPVIIQKQGGGFLYATTDLAALRYRVNTLNAKRIMYFIDAR 342

Query: 825  QGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
            Q +H + +   ++KAG ++ +   ++ + FG ++G D K FKTR+G TVKL+ELL E + 
Sbjct: 343  QSLHMQQVFTISRKAGFVS-DAVSLEHLAFGTMMGSDGKPFKTRTGGTVKLAELLSEAVD 401

Query: 885  RSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
            R+   + +KN   EL   +++E  + V  G +KYADL   R  DYVFS++ ML   GNTA
Sbjct: 402  RAASVVSEKN--PELAGEDIAEIARKVGIGAVKYADLCKTRTNDYVFSWESMLSFEGNTA 459

Query: 945  VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
             YL YAYTR+ SI R AG+  E L      +P+ L  E+E ALA  LL+ ++VL  + R+
Sbjct: 460  PYLQYAYTRVQSIFRKAGVAPETL-----GSPILLGSEQEKALAIKLLQFSEVLDQMARE 514

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
               H LC YLYDI++ +  FY+ C  ++   EG    V   RL L    A+ + +   +L
Sbjct: 515  AMPHLLCTYLYDIASLYMSFYEACPILK---EGVDAEVRDSRLRLCHLVARTIAQGLGLL 571

Query: 1065 NI 1066
             I
Sbjct: 572  GI 573



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/434 (36%), Positives = 225/434 (51%), Gaps = 39/434 (8%)

Query: 85  MSVRDYLSD-VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           M++RD L+  V         P   D  A +A   +     FGD+Q N AM   K      
Sbjct: 1   MNIRDLLNQRVLAAMATCGVP--ADLPALIAPGKKA---GFGDYQANGAMGAAKAMG--- 52

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
              NP D+A  I + +         L  + DK+E+A PGF+N++L   + G+QI     +
Sbjct: 53  --TNPRDLAGKIVAAL--------DLEGIADKLEIAGPGFINIYLKPAWLGKQIALAQTD 102

Query: 204 G-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
             +  P       V++D+S PN+AKEMHVGHLRSTIIGD+++RLLE+LGH V+R NHVGD
Sbjct: 103 ARLAVPQAEHAQTVVIDYSGPNLAKEMHVGHLRSTIIGDSLARLLEFLGHQVIRQNHVGD 162

Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           WGTQFGMLIA L+++       +  + DL+ FY+++KK FD+D  F  +A   VV LQ  
Sbjct: 163 WGTQFGMLIAELEEQLGAKGDAALELKDLEVFYQQAKKHFDDDAAFADKARDYVVRLQGG 222

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLEL 379
           D    K W+   D+S     +IY +LNVTLT+   RGESFY   +  LV  L+ +GL   
Sbjct: 223 DAQMLKLWQQFKDISLHHSSEIYQQLNVTLTDADVRGESFYNDDLAPLVKALQDQGLAVE 282

Query: 380 DDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
            +G ++++      +D    P+ I K  GGF Y T+DLAA+R R+    A  I+Y  D R
Sbjct: 283 SEGAQVVFLPELADKDGNPSPVIIQKQGGGFLYATTDLAALRYRVNTLNAKRIMYFIDAR 342

Query: 435 SYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTHAVQV 491
               + Q      K   +S + S +       M     P + R      L+++ + AV  
Sbjct: 343 QSLHMQQVFTISRKAGFVSDAVSLEHLAFGTMMGSDGKPFKTRTGGTVKLAELLSEAV-- 400

Query: 492 AFPELGDKTASVAS 505
                 D+ ASV S
Sbjct: 401 ------DRAASVVS 408



 Score =  230 bits (586), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 28/360 (7%)

Query: 1102 MSVRDYLSD-VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            M++RD L+  V         P   D  A +A   +     FGD+Q N AM   K      
Sbjct: 1    MNIRDLLNQRVLAAMATCGVP--ADLPALIAPGKKA---GFGDYQANGAMGAAKAMG--- 52

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
               NP D+A  I + +         L  + DK+E+A PGF+N++L   + G+QI     +
Sbjct: 53   --TNPRDLAGKIVAAL--------DLEGIADKLEIAGPGFINIYLKPAWLGKQIALAQTD 102

Query: 1221 G-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
              +  P       V++D+S PN+AKEMHVGHLRSTIIGD+++RLLE+LGH V+R NHVGD
Sbjct: 103  ARLAVPQAEHAQTVVIDYSGPNLAKEMHVGHLRSTIIGDSLARLLEFLGHQVIRQNHVGD 162

Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            WGTQFGMLIA L+++       +  + DL+ FY+++KK FD+D  F  +A   VV LQ  
Sbjct: 163  WGTQFGMLIAELEEQLGAKGDAALELKDLEVFYQQAKKHFDDDAAFADKARDYVVRLQGG 222

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLEL 1396
            D    K W+   D+S     +IY +LNVTLT+   RGESFY   +  LV  L+ +GL   
Sbjct: 223  DAQMLKLWQQFKDISLHHSSEIYQQLNVTLTDADVRGESFYNDDLAPLVKALQDQGLAVE 282

Query: 1397 DDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             +G ++++      +D    P+ I K  GGF Y T+DLAA+R R+    A  I+Y  D R
Sbjct: 283  SEGAQVVFLPELADKDGNPSPVIIQKQGGGFLYATTDLAALRYRVNTLNAKRIMYFIDAR 342


>gi|354724107|ref|ZP_09038322.1| arginyl-tRNA synthetase [Enterobacter mori LMG 25706]
          Length = 577

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    +   + +   GV  P   K   +++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVSQP---KAQTIVIDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R  E+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTNEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDTYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I   D  V A +T V+
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANI---DESVLANAT-VN 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  ITEDREAQLAARLLQFEETLTVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAESEA- 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               V   RL LA+ TAK +K   D L I T
Sbjct: 547  ---VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 187/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    +   + +   GV  P   K   +++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLASHVDAALKSDRLGVSQP---KAQTIVIDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R  E+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDASVRTNEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDTYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  227 bits (578), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 186/333 (55%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    +   + +   GV  P   K   +++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVSQP---KAQTIVIDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R  E+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTNEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDTYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|336123667|ref|YP_004565715.1| arginyl-tRNa synthetase [Vibrio anguillarum 775]
 gi|335341390|gb|AEH32673.1| Arginyl-tRNA synthetase [Vibrio anguillarum 775]
          Length = 588

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/565 (39%), Positives = 328/565 (58%), Gaps = 34/565 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 45   QFGDYQANGIMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 91

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +     T   +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 92   FINIFLSEAFLAKQADIALADEHLGVTKEAQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 151

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK-SPPIADLQAFYKESKKR 691
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +   + S  ++DL+AFY+ESKK 
Sbjct: 152  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGNEVSMELSDLEAFYRESKKL 211

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 748
            +DEDE+F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES
Sbjct: 212  YDEDEVFAAKARNYVVKLQSGDEFCAQMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGES 271

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLA 803
             Y   +  +V  L++KGL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A
Sbjct: 272  MYNDMLPGIVADLKEKGLAQEDDGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIA 331

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
              + R E   AD ++Y  D  Q  H        +KAG + P++  ++   FG++LG+D +
Sbjct: 332  CAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PDEVTLEHHAFGMMLGKDGR 390

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTR+G TV+L++LLDE   R+   ++ KN   +L   E +     VA   +KYADLS 
Sbjct: 391  PFKTRAGGTVRLADLLDEAQERAAKLIESKN--PDLDAAEKANIANTVAMAAVKYADLSK 448

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            +R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L     +  + +  EK
Sbjct: 449  HRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVSMDNL-----TGEIKVTQEK 503

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V 
Sbjct: 504  EKALIAKLLQFEEAVQAVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----SVK 559

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL LA  TAK +K+   +L I T
Sbjct: 560  QSRLKLAALTAKTIKQGLSLLGIDT 584



 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/329 (40%), Positives = 196/329 (59%), Gaps = 22/329 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 45  QFGDYQANGIMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 91

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +     T   +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 92  FINIFLSEAFLAKQADIALADEHLGVTKEAQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 151

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK-SPPIADLQAFYKESKKR 301
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +   + S  ++DL+AFY+ESKK 
Sbjct: 152 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGNEVSMELSDLEAFYRESKKL 211

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 358
           +DEDE+F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES
Sbjct: 212 YDEDEVFAAKARNYVVKLQSGDEFCAQMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGES 271

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLA 413
            Y   +  +V  L++KGL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A
Sbjct: 272 MYNDMLPGIVADLKEKGLAQEDDGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIA 331

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
             + R E   AD ++Y  D R +  ++QA
Sbjct: 332 CAKYRYETLGADRVLYFIDSRQHQHLMQA 360



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 195/328 (59%), Gaps = 22/328 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 45   QFGDYQANGIMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 91

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +     T   +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 92   FINIFLSEAFLAKQADIALADEHLGVTKEAQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 151

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK-SPPIADLQAFYKESKKR 1318
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +   + S  ++DL+AFY+ESKK 
Sbjct: 152  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGNEVSMELSDLEAFYRESKKL 211

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 1375
            +DEDE+F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES
Sbjct: 212  YDEDEVFAAKARNYVVKLQSGDEFCAQMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGES 271

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLA 1430
             Y   +  +V  L++KGL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A
Sbjct: 272  MYNDMLPGIVADLKEKGLAQEDDGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIA 331

Query: 1431 AIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
              + R E   AD ++Y  D R +  ++Q
Sbjct: 332  CAKYRYETLGADRVLYFIDSRQHQHLMQ 359


>gi|330445483|ref|ZP_08309135.1| arginyl-tRNA synthetase [Photobacterium leiognathi subsp.
            mandapamensis svers.1.1.]
 gi|328489674|dbj|GAA03632.1| arginyl-tRNA synthetase [Photobacterium leiognathi subsp.
            mandapamensis svers.1.1.]
          Length = 576

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/564 (38%), Positives = 329/564 (58%), Gaps = 34/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +   +         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDCL--------DLDGIAEKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL++ +  E+ ++ + +            ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLNKAWLAERGEEALKDERLAVNTETAQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA++Q K  +    S  I+DL+ FY+ESK  +
Sbjct: 142  VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMQRKEKEGADVSMNISDLEGFYRESKVLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DED  F + A   VV LQ  D    + W+ + +++ +  Q+ YDRLNV+LT+    GES 
Sbjct: 202  DEDAEFGETARNFVVRLQSGDEYCLEKWKQLVEITLKQNQRNYDRLNVSLTDDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL    DG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262  YNDMLPGVVADLKEKGLAVESDGATVVYLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H  +  E  +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEQLHADRVLYFIDSRQHQHLMMAWEIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   +++KN   EL+  E +   Q VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERANKLIEEKN--PELSAEEKANIAQTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI + A +   DL     + P+ +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFKRANVELADL-----TQPIVITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  D   K      
Sbjct: 494  QALLSKLLQFEEAVQSVAREGQPHLMCTYLFELAGMFSSFYEACPILNADEATK-----Q 548

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  D+L I T
Sbjct: 549  SRLKLAMLTAKTIKQGLDLLGIET 572



 Score =  236 bits (602), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 146/415 (35%), Positives = 224/415 (53%), Gaps = 34/415 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +   +         L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDCL--------DLDGIAEKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL++ +  E+ ++ + +            ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLNKAWLAERGEEALKDERLAVNTETAQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA++Q K  +    S  I+DL+ FY+ESK  +
Sbjct: 142 VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMQRKEKEGADVSMNISDLEGFYRESKVLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DED  F + A   VV LQ  D    + W+ + +++ +  Q+ YDRLNV+LT+    GES 
Sbjct: 202 DEDAEFGETARNFVVRLQSGDEYCLEKWKQLVEITLKQNQRNYDRLNVSLTDDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL    DG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262 YNDMLPGVVADLKEKGLAVESDGATVVYLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM----NVP 470
            + R E+  AD ++Y  D R  HQ L    E  +K G    S S        M      P
Sbjct: 322 AKYRYEQLHADRVLYFIDSRQ-HQHLMMAWEIVRKAGYVPESVSLEHHAFGMMLGKDGRP 380

Query: 471 VRDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
            + R      L+D+   A       ++   PEL  ++ A++A T      K+ D 
Sbjct: 381 FKTRAGGTVRLADLLDEAEERANKLIEEKNPELSAEEKANIAQTVAMAAVKYSDL 435



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 194/326 (59%), Gaps = 21/326 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +   +         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDCL--------DLDGIAEKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL++ +  E+ ++ + +            ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLNKAWLAERGEEALKDERLAVNTETAQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA++Q K  +    S  I+DL+ FY+ESK  +
Sbjct: 142  VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMQRKEKEGADVSMNISDLEGFYRESKVLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DED  F + A   VV LQ  D    + W+ + +++ +  Q+ YDRLNV+LT+    GES 
Sbjct: 202  DEDAEFGETARNFVVRLQSGDEYCLEKWKQLVEITLKQNQRNYDRLNVSLTDDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL    DG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262  YNDMLPGVVADLKEKGLAVESDGATVVYLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVL 1457
             + R E+  AD ++Y  D R +  ++
Sbjct: 322  AKYRYEQLHADRVLYFIDSRQHQHLM 347


>gi|260776440|ref|ZP_05885335.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607663|gb|EEX33928.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 577

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 325/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +         +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAESALSDSRLGVAAEAQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQGGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+++GL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKEQGLAQEDDGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PEEVTLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R++  ++ KN   +L   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAIKLIESKN--PDLETAEKQNIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AGI+ ++L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGISMDEL-----AGDIQITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             +L   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 494  KSLIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILNTEDE----SVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 194/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +         +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAESALSDSRLGVAAEAQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQGGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+++GL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPGIVADLKEQGLAQEDDGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 193/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +         +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAESALSDSRLGVAAEAQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQGGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+++GL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKEQGLAQEDDGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|283832728|ref|ZP_06352469.1| arginine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291072410|gb|EFE10519.1| arginine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 577

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 322/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  +     GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALTCDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L     +  V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDENAL----TNAQVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  IREDREAQLAARLLQFEETLAVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA+ TAK +K   D L I T
Sbjct: 546  --EIRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 190/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  +     GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAQHVQQALTCDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  +     GV  P    K  V+VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVQQALTCDRLGVTQPA---KQTVVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLTYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|440757567|ref|ZP_20936751.1| Arginyl-tRNA synthetase [Pantoea agglomerans 299R]
 gi|436428690|gb|ELP26343.1| Arginyl-tRNA synthetase [Pantoea agglomerans 299R]
          Length = 576

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/567 (38%), Positives = 328/567 (57%), Gaps = 40/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +     +  +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDHNWLATHARQALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHVRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ K  +       +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLE-KQQNEDHAEMALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     G
Sbjct: 198  RTYDEDPEFAERARSYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNDMLPGIVSDLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E  KAD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLKADRVLYYIDSRQHQHLVQAWTIVRKAGYV-PESVPLEHHAFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTRSG T+KLS+LLDE  +R+   +++KN   E++  E+    + V    +KYADL
Sbjct: 377  GRPFKTRSGGTIKLSDLLDEAYQRAYTLVREKN--PEMSEAEVKTLAEVVGISAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGIN++ L        + +  
Sbjct: 435  SKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGINADSL-----DAEIVISE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            E+E  LA  LL+  +V+  V RD   H +C YLYD++  FS FY++C  +  +++     
Sbjct: 490  EREAQLATRLLQFEEVITQVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAESDA---- 545

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA  TAK +K+  D L I T
Sbjct: 546  TRLSRLQLAALTAKTLKQGLDTLGIDT 572



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/401 (35%), Positives = 217/401 (54%), Gaps = 31/401 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +     +  +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDHNWLATHARQALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHVRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ K  +       +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLE-KQQNEDHAEMALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     G
Sbjct: 198 RTYDEDPEFAERARSYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNDMLPGIVSDLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---N 468
           +A  + R E  KAD ++Y  D R +  ++QA     K   +  S   +       +    
Sbjct: 318 IACAKYRYETLKADRVLYYIDSRQHQHLVQAWTIVRKAGYVPESVPLEHHAFGMMLGKDG 377

Query: 469 VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEK 509
            P + R      LSD+   A Q A+  + +K   ++    K
Sbjct: 378 RPFKTRSGGTIKLSDLLDEAYQRAYTLVREKNPEMSEAEVK 418



 Score =  229 bits (585), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +     +  +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDHNWLATHARQALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHVRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ K  +       +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLE-KQQNEDHAEMALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     G
Sbjct: 198  RTYDEDPEFAERARSYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNDMLPGIVSDLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E  KAD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLKADRVLYYIDSRQHQHLVQ 347


>gi|254506840|ref|ZP_05118979.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550125|gb|EED27111.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 605

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/564 (38%), Positives = 326/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 63   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 109

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 110  FINIFLSEEFLAKQAESALADARLGVAKEEQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 169

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 170  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 229

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 230  DEDEEFALRARNYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 289

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+++G+ + DDG ++++ E     D  ++ + I K DGGF Y T+D+A 
Sbjct: 290  YNDMLPGIVADLKERGIAQEDDGAQVVFLEEYKNKDGEAMGVIIQKRDGGFLYTTTDIAC 349

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   A+ ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 350  AKYRYETLGANRVLYFIDSRQHQHLMQAWTIVRKAGYV-PEEVSLEHHAFGMMLGKDGRP 408

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R++  ++ KN   +L   E  +    VA   +KYADLS +
Sbjct: 409  FKTRAGGTVRLADLLDEAEERAIKLIESKN--ADLDSEEKVKIANTVAMAAVKYADLSKH 466

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR++SI   AGI+ ++L     +  + +  EKE
Sbjct: 467  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVSSIFAKAGISMDNL-----AGEIKVTEEKE 521

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 522  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILNTEDE----SVKQ 577

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 578  SRLKLAALTAKTIKQGLSLLGIET 601



 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 194/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 63  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 109

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 110 FINIFLSEEFLAKQAESALADARLGVAKEEQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 169

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 170 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 229

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 230 DEDEEFALRARNYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 289

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+++G+ + DDG ++++ E     D  ++ + I K DGGF Y T+D+A 
Sbjct: 290 YNDMLPGIVADLKERGIAQEDDGAQVVFLEEYKNKDGEAMGVIIQKRDGGFLYTTTDIAC 349

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   A+ ++Y  D R +  ++QA
Sbjct: 350 AKYRYETLGANRVLYFIDSRQHQHLMQA 377



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 193/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 63   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 109

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 110  FINIFLSEEFLAKQAESALADARLGVAKEEQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 169

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 170  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 229

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 230  DEDEEFALRARNYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 289

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+++G+ + DDG ++++ E     D  ++ + I K DGGF Y T+D+A 
Sbjct: 290  YNDMLPGIVADLKERGIAQEDDGAQVVFLEEYKNKDGEAMGVIIQKRDGGFLYTTTDIAC 349

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   A+ ++Y  D R +  ++Q
Sbjct: 350  AKYRYETLGANRVLYFIDSRQHQHLMQ 376


>gi|319637713|ref|ZP_07992479.1| arginyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400868|gb|EFV81523.1| arginyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 572

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/561 (41%), Positives = 323/561 (57%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ LS  +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLSPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+LE++G++V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFMGNNVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAIEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K F
Sbjct: 321  RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEHAKAEFIGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E  +  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAGKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V   +  H+L  YLY I+T FS FY+ C  ++  +EG  +     
Sbjct: 491  QLAAELLKFEDVLQSVADTVYPHYLAAYLYQIATLFSRFYEACPILK--SEGATR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  ++L I
Sbjct: 546  RLQLAKLTGDTLKQGLELLGI 566



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/416 (37%), Positives = 219/416 (52%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ LS  +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLSPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+LE++G++V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLEFMGNNVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAIEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R RI   KAD ++YV DHR      Q      K   +   + ++  G    M     P +
Sbjct: 321 RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEHAKAEFIGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+   +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAGKIGKTVGIGAVKYADLSKN 436



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 188/319 (58%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ LS  +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLSPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+LE++G++V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFMGNNVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAIEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R RI   KAD ++YV DHR
Sbjct: 321  RYRIGRLKADRLLYVVDHR 339


>gi|308800206|ref|XP_003074884.1| Args arginyl-tRNA synthetase (IC) [Ostreococcus tauri]
 gi|116061434|emb|CAL52152.1| Args arginyl-tRNA synthetase (IC) [Ostreococcus tauri]
          Length = 603

 Score =  385 bits (989), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 223/555 (40%), Positives = 313/555 (56%), Gaps = 52/555 (9%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKK--NPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
             GD+QC+ AM +    +  GE    NP ++A  I   ++             D I +A  
Sbjct: 93   LGDYQCSSAMQIFSALRKAGETDFCNPREVAAVIVDGISD--------TTTFDSITIAGA 144

Query: 572  GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            GF+N  LS  +   +++++    V+P +  +   VLVDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 145  GFINFKLSDHFILTRLREL-GKTVKPTSSGESGSVLVDFSSPNIAKEMHVGHLRSTIIGD 203

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
             +  + E+ G   +RLNHVGDWGTQFGMLI  + D   + ++    ++DLQ  YK +K+R
Sbjct: 204  ALCNVFEFCGLKTIRLNHVGDWGTQFGMLIQFMTD---NKVSPDSAVSDLQECYKRAKER 260

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 751
            FD+D+ FK ++ Q V+ LQ +D D  + W+ ICD SR +FQ IYDRLN+++ ERGES+Y 
Sbjct: 261  FDQDDDFKSQSKQAVIKLQSYDADALRTWKQICDASRAEFQTIYDRLNISIIERGESYYN 320

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 811
              +  ++  L  K ++  D G   ++ +D    P+   KSDGGF Y ++DLAAIR R  E
Sbjct: 321  DMIPAVLDELVAKNVVVEDAGALCIFDDDHAEAPVICRKSDGGFNYASTDLAAIRHRALE 380

Query: 812  EKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGD 871
            EK D I+YVTD GQ  HFR + + A  AG            G G             SG+
Sbjct: 381  EKVDRIIYVTDQGQQKHFRAIFKTAHAAGW-----------GHGA------------SGE 417

Query: 872  TVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVF 931
            TVKL  LLDE   R L  LK+K   T+L+  ELS A + +    +KYADL +NR   Y F
Sbjct: 418  TVKLKSLLDEAEERCLQFLKEKG--TDLSAEELSTASRILGVSSVKYADLHNNRLTAYTF 475

Query: 932  SFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTL 991
            SFD+MLD +GNTA+YL Y++ R+A+I R A   + DL +      +  E+  E  LA  L
Sbjct: 476  SFDRMLDLKGNTAMYLQYSHARVATILRKA--PTLDLPLDG----LHFENAAERLLAVHL 529

Query: 992  LRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAE 1051
            ++++DVL    ++L    +C+YLY + T F+ FY  C  I  + E         RL L  
Sbjct: 530  IKLDDVLAATMKELAPSKICDYLYTLCTMFNNFYAECKVIGGENEAS-------RLFLCM 582

Query: 1052 ATAKVMKKCFDILNI 1066
             TA  MK  F +L +
Sbjct: 583  RTAATMKIAFSLLGM 597



 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 139/339 (41%), Positives = 201/339 (59%), Gaps = 15/339 (4%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKK--NPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
            GD+QC+ AM +    +  GE    NP ++A  I   ++             D I +A  
Sbjct: 93  LGDYQCSSAMQIFSALRKAGETDFCNPREVAAVIVDGISD--------TTTFDSITIAGA 144

Query: 182 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           GF+N  LS  +   +++++    V+P +  +   VLVDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 145 GFINFKLSDHFILTRLREL-GKTVKPTSSGESGSVLVDFSSPNIAKEMHVGHLRSTIIGD 203

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
            +  + E+ G   +RLNHVGDWGTQFGMLI  + D   + ++    ++DLQ  YK +K+R
Sbjct: 204 ALCNVFEFCGLKTIRLNHVGDWGTQFGMLIQFMTD---NKVSPDSAVSDLQECYKRAKER 260

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 361
           FD+D+ FK ++ Q V+ LQ +D D  + W+ ICD SR +FQ IYDRLN+++ ERGES+Y 
Sbjct: 261 FDQDDDFKSQSKQAVIKLQSYDADALRTWKQICDASRAEFQTIYDRLNISIIERGESYYN 320

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 421
             +  ++  L  K ++  D G   ++ +D    P+   KSDGGF Y ++DLAAIR R  E
Sbjct: 321 DMIPAVLDELVAKNVVVEDAGALCIFDDDHAEAPVICRKSDGGFNYASTDLAAIRHRALE 380

Query: 422 EKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQT 460
           EK D I+YVTD +   +  +AI +     G    +S +T
Sbjct: 381 EKVDRIIYVTD-QGQQKHFRAIFKTAHAAGWGHGASGET 418



 Score =  264 bits (674), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 190/312 (60%), Gaps = 14/312 (4%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKK--NPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
             GD+QC+ AM +    +  GE    NP ++A  I   ++             D I +A  
Sbjct: 93   LGDYQCSSAMQIFSALRKAGETDFCNPREVAAVIVDGISD--------TTTFDSITIAGA 144

Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            GF+N  LS  +   +++++    V+P +  +   VLVDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 145  GFINFKLSDHFILTRLREL-GKTVKPTSSGESGSVLVDFSSPNIAKEMHVGHLRSTIIGD 203

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
             +  + E+ G   +RLNHVGDWGTQFGMLI  + D   + ++    ++DLQ  YK +K+R
Sbjct: 204  ALCNVFEFCGLKTIRLNHVGDWGTQFGMLIQFMTD---NKVSPDSAVSDLQECYKRAKER 260

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 1378
            FD+D+ FK ++ Q V+ LQ +D D  + W+ ICD SR +FQ IYDRLN+++ ERGES+Y 
Sbjct: 261  FDQDDDFKSQSKQAVIKLQSYDADALRTWKQICDASRAEFQTIYDRLNISIIERGESYYN 320

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE 1438
              +  ++  L  K ++  D G   ++ +D    P+   KSDGGF Y ++DLAAIR R  E
Sbjct: 321  DMIPAVLDELVAKNVVVEDAGALCIFDDDHAEAPVICRKSDGGFNYASTDLAAIRHRALE 380

Query: 1439 EKADWIVYVTDH 1450
            EK D I+YVTD 
Sbjct: 381  EKVDRIIYVTDQ 392


>gi|419763703|ref|ZP_14289946.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae DSM
            30104]
 gi|397743632|gb|EJK90847.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae DSM
            30104]
          Length = 577

 Score =  385 bits (989), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 321/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++ 
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMQ 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   +++  EL    + V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMSADELENLAKVVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R AGI+      A    PV 
Sbjct: 432  ADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDEN----AMIDAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  IAEDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA  TAK +K   D L I T
Sbjct: 546  --ETRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 190/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLADNVNRALQSERLGVTKPQAQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|440287175|ref|YP_007339940.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI 57]
 gi|440046697|gb|AGB77755.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI 57]
          Length = 577

 Score =  385 bits (989), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 322/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E +   + +   G+  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVNKALASDRLGITQPAPQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDASVRTLELLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQSGDEYFREMWRKLVDITMTQNQITYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KG+    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGVVADLKAKGMAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLADLLDEALERARRLVVEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI   +L  A     V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIEESELLNAT----VE 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            ++ ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  ++E  
Sbjct: 488  IKEDREAQLAARLLQFEETLNVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAESE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              ++   RL LA  TAK +K   D L I T
Sbjct: 546  --SIRNSRLKLALLTAKTLKTGLDTLGIET 573



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 188/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E +   + +   G+  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAEHVNKALASDRLGITQPAPQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDASVRTLELLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQSGDEYFREMWRKLVDITMTQNQITYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KG+    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGVVADLKAKGMAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 187/333 (56%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E +   + +   G+  P       ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAEHVNKALASDRLGITQPAPQT---IVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDASVRTLELLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQSGDEYFREMWRKLVDITMTQNQITYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KG+    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGVVADLKAKGMAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|407794650|ref|ZP_11141674.1| arginyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
 gi|407211023|gb|EKE80893.1| arginyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
          Length = 580

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/572 (39%), Positives = 329/572 (57%), Gaps = 54/572 (9%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            GDF  N A+ L K       K NP  +A Q IA++  ++L         I K ++A PGF
Sbjct: 41   GDFASNLALMLAKT-----AKMNPRALAEQLIAALPANDL---------IAKADIAGPGF 86

Query: 574  VNVFLSR---------VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHL 624
            +N  +S+          YA +++   +    +P        V++D+SSPN+AKEMHVGHL
Sbjct: 87   INFTISQQQLLGQLQAAYASQRLN--VELSAEPDC------VVIDYSSPNLAKEMHVGHL 138

Query: 625  RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAF 684
            RSTIIGD +SR LE+LGH V+R NHVGDWGTQFGML+AH+++   D       +++L+ F
Sbjct: 139  RSTIIGDAVSRTLEFLGHQVIRQNHVGDWGTQFGMLLAHMEEL--DASDSQWQLSNLETF 196

Query: 685  YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 744
            YK +KKRFDE E F  RA Q VV+LQ  D    + W+   D+S    Q++YDRL V LT 
Sbjct: 197  YKAAKKRFDESETFADRARQLVVSLQSGDQYCNQLWQQFIDISLSHCQEVYDRLGVKLTR 256

Query: 745  ---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFT 796
                 ES Y   +  ++ +L ++GLL  D G + ++     G+D   +P+ + K  GG+ 
Sbjct: 257  ADVMAESAYNDKLAGVIEHLRERGLLVEDQGAQCVFLDEFKGKDGEPLPVIVQKKGGGYL 316

Query: 797  YDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGV 856
            Y T+DLAAI  R ++     ++Y  D  Q +HF+ +   A+KAG +   +  ++ + FG+
Sbjct: 317  YATTDLAAIEYRQKQLGGTRLLYFVDQRQSLHFQQIFTLARKAGFVE-GELDIEHLAFGM 375

Query: 857  VLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCI 916
            VLG+D K FK+R G   KL++LLDE  RR+L  L+ K+   EL+P +     + V    +
Sbjct: 376  VLGKDGKPFKSRDGGVTKLADLLDEAQRRALTLLQQKD--NELSPAQQQHVAEVVGISSV 433

Query: 917  KYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP 976
            KYADLS NR  DY+F +D ML   GNTA YLLYA+TR+ S+   AGI+     +A     
Sbjct: 434  KYADLSKNRTSDYMFDWDTMLSFEGNTAPYLLYAFTRVRSVFEKAGID-----MAEVPGE 488

Query: 977  VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE 1036
            + LEHEKE ALA  L++ N+ L  V      H LC YL+D++ AFS FY++C  + +D  
Sbjct: 489  IILEHEKEQALANQLVKFNETLQSVANKCMPHFLCGYLFDLAGAFSSFYEHCPILNQDD- 547

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 +   RL L+  TA+ +++   +L I T
Sbjct: 548  ---AALRNSRLKLSALTARTLQQGLALLGIDT 576



 Score =  220 bits (560), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/328 (39%), Positives = 187/328 (57%), Gaps = 42/328 (12%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           GDF  N A+ L K       K NP  +A Q IA++  ++L         I K ++A PGF
Sbjct: 41  GDFASNLALMLAKT-----AKMNPRALAEQLIAALPANDL---------IAKADIAGPGF 86

Query: 184 VNVFLSR---------VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHL 234
           +N  +S+          YA +++   +    +P        V++D+SSPN+AKEMHVGHL
Sbjct: 87  INFTISQQQLLGQLQAAYASQRLN--VELSAEPDC------VVIDYSSPNLAKEMHVGHL 138

Query: 235 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAF 294
           RSTIIGD +SR LE+LGH V+R NHVGDWGTQFGML+AH+++   D       +++L+ F
Sbjct: 139 RSTIIGDAVSRTLEFLGHQVIRQNHVGDWGTQFGMLLAHMEEL--DASDSQWQLSNLETF 196

Query: 295 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 354
           YK +KKRFDE E F  RA Q VV+LQ  D    + W+   D+S    Q++YDRL V LT 
Sbjct: 197 YKAAKKRFDESETFADRARQLVVSLQSGDQYCNQLWQQFIDISLSHCQEVYDRLGVKLTR 256

Query: 355 ---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFT 406
                ES Y   +  ++ +L ++GLL  D G + ++     G+D   +P+ + K  GG+ 
Sbjct: 257 ADVMAESAYNDKLAGVIEHLRERGLLVEDQGAQCVFLDEFKGKDGEPLPVIVQKKGGGYL 316

Query: 407 YDTSDLAAIRQRIEEEKADWIVYVTDHR 434
           Y T+DLAAI  R ++     ++Y  D R
Sbjct: 317 YATTDLAAIEYRQKQLGGTRLLYFVDQR 344



 Score =  220 bits (560), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/328 (39%), Positives = 187/328 (57%), Gaps = 42/328 (12%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIA-QSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            GDF  N A+ L K       K NP  +A Q IA++  ++L         I K ++A PGF
Sbjct: 41   GDFASNLALMLAKT-----AKMNPRALAEQLIAALPANDL---------IAKADIAGPGF 86

Query: 1201 VNVFLSR---------VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHL 1251
            +N  +S+          YA +++   +    +P        V++D+SSPN+AKEMHVGHL
Sbjct: 87   INFTISQQQLLGQLQAAYASQRLN--VELSAEPDC------VVIDYSSPNLAKEMHVGHL 138

Query: 1252 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAF 1311
            RSTIIGD +SR LE+LGH V+R NHVGDWGTQFGML+AH+++   D       +++L+ F
Sbjct: 139  RSTIIGDAVSRTLEFLGHQVIRQNHVGDWGTQFGMLLAHMEEL--DASDSQWQLSNLETF 196

Query: 1312 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 1371
            YK +KKRFDE E F  RA Q VV+LQ  D    + W+   D+S    Q++YDRL V LT 
Sbjct: 197  YKAAKKRFDESETFADRARQLVVSLQSGDQYCNQLWQQFIDISLSHCQEVYDRLGVKLTR 256

Query: 1372 ---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFT 1423
                 ES Y   +  ++ +L ++GLL  D G + ++     G+D   +P+ + K  GG+ 
Sbjct: 257  ADVMAESAYNDKLAGVIEHLRERGLLVEDQGAQCVFLDEFKGKDGEPLPVIVQKKGGGYL 316

Query: 1424 YDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            Y T+DLAAI  R ++     ++Y  D R
Sbjct: 317  YATTDLAAIEYRQKQLGGTRLLYFVDQR 344


>gi|378580628|ref|ZP_09829285.1| arginyl-tRNA synthetase [Pantoea stewartii subsp. stewartii DC283]
 gi|377816952|gb|EHU00051.1| arginyl-tRNA synthetase [Pantoea stewartii subsp. stewartii DC283]
          Length = 576

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/570 (38%), Positives = 330/570 (57%), Gaps = 46/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL R +  +  +  +      VN V+P T      ++VD+S+PN+AKEMHVGH+RS
Sbjct: 82   FINIFLDRQWLADHARQALNHPRLGVNPVEPQT------IVVDYSAPNVAKEMHVGHVRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+
Sbjct: 136  TIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
            E+K+ +DED  F +RA   VV LQ  D   ++ W+ + D++    Q IY+RLNVTLT   
Sbjct: 195  EAKRTYDEDPEFAERARGYVVKLQGGDDYCRQMWKKLVDITMTQNQHIYNRLNVTLTRDD 254

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   + ++V  L+ KGL    +G  +++ E   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPEIVADLKAKGLAVESEGATVVFLEEFQNKEGEPMGVIIQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  R R E   AD ++Y  D  Q  H +      +KAG + P    ++   FG++L
Sbjct: 315  TTDIACARYRYETLHADRVIYYIDSRQHQHLQQAWTIVRKAGYV-PASVPLEHHAFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D + FKTRSG T+KLS+LLDE   R+   +++KN   ++T  E+S   + V    +KY
Sbjct: 374  GKDGRPFKTRSGGTIKLSDLLDEAYERAYTLVREKN--PDMTEEEVSTLAEVVGISAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI+++     A    + 
Sbjct: 432  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDAD-----AIQAEIV 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L  ++E  LA  LL+  +V+  V RD   H +C YLYD++  FS FY++C  +  + +  
Sbjct: 487  LTDDREALLATRLLQFEEVITQVARDGTPHVMCAYLYDLAGLFSGFYEHCPILAAEDD-- 544

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL +A  TAK +K   D L I+T
Sbjct: 545  --VTRLSRLQIAALTAKTLKLGLDTLGIKT 572



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 196/334 (58%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL R +  +  +  +      VN V+P T      ++VD+S+PN+AKEMHVGH+RS
Sbjct: 82  FINIFLDRQWLADHARQALNHPRLGVNPVEPQT------IVVDYSAPNVAKEMHVGHVRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+
Sbjct: 136 TIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
           E+K+ +DED  F +RA   VV LQ  D   ++ W+ + D++    Q IY+RLNVTLT   
Sbjct: 195 EAKRTYDEDPEFAERARGYVVKLQGGDDYCRQMWKKLVDITMTQNQHIYNRLNVTLTRDD 254

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   + ++V  L+ KGL    +G  +++ E   ++   PM ++  K DGG+ Y 
Sbjct: 255 VMGESLYNDMLPEIVADLKAKGLAVESEGATVVFLEEFQNKEGEPMGVIIQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  R R E   AD ++Y  D R +  + QA
Sbjct: 315 TTDIACARYRYETLHADRVIYYIDSRQHQHLQQA 348



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 196/333 (58%), Gaps = 35/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL R +  +  +  +      VN V+P T      ++VD+S+PN+AKEMHVGH+RS
Sbjct: 82   FINIFLDRQWLADHARQALNHPRLGVNPVEPQT------IVVDYSAPNVAKEMHVGHVRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+
Sbjct: 136  TIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEMA-LADLEGFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
            E+K+ +DED  F +RA   VV LQ  D   ++ W+ + D++    Q IY+RLNVTLT   
Sbjct: 195  EAKRTYDEDPEFAERARGYVVKLQGGDDYCRQMWKKLVDITMTQNQHIYNRLNVTLTRDD 254

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   + ++V  L+ KGL    +G  +++ E   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPEIVADLKAKGLAVESEGATVVFLEEFQNKEGEPMGVIIQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  R R E   AD ++Y  D R  HQ LQ
Sbjct: 315  TTDIACARYRYETLHADRVIYYIDSRQ-HQHLQ 346


>gi|372277262|ref|ZP_09513298.1| arginyl-tRNA synthetase [Pantoea sp. SL1_M5]
 gi|390434888|ref|ZP_10223426.1| arginyl-tRNA ligase [Pantoea agglomerans IG1]
          Length = 576

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/568 (38%), Positives = 329/568 (57%), Gaps = 42/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL   +     ++     ++ P L  +L     ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 82   FINIFLDHNWLASHARE----ALRLPRLGVQLAEPQTIVVDYSAPNVAKEMHVGHVRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ K  +       +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLE-KQQNEDHAEMALADLEGFYREA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            K+ +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     
Sbjct: 197  KRTYDEDPEFAERARSYVVKLQGGDDYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 800
            GES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 257  GESLYNDMLPGIVSDLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTT 316

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+A  + R E  KAD ++Y  D  Q  H        +KAG + P    ++   FG++LG+
Sbjct: 317  DIACAKYRYETLKADRVLYYIDSRQHQHLVQAWTIVRKAGYV-PESVPLEHHAFGMMLGK 375

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D + FKTRSG T+KLS+LLDE  +R+   +++KN   E++  E+    + V    +KYAD
Sbjct: 376  DGRPFKTRSGGTIKLSDLLDEAYQRAYTLVREKN--PEMSEAEVKTLAEVVGISAVKYAD 433

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI+++ L        + + 
Sbjct: 434  LSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDADSL-----DAEIVIS 488

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             E+E  LA  LL+  +V+  V RD   H +C YLYD++  FS FY++C  +  +++    
Sbjct: 489  EEREAQLATRLLQFEEVITQVARDGTPHVMCAYLYDLAGLFSGFYEHCPILTAESD---- 544

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            T    RL LA  TAK +K+  D L I T
Sbjct: 545  TTRLSRLQLAALTAKTLKQGLDTLGIDT 572



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 217/402 (53%), Gaps = 33/402 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL   +     ++     ++ P L  +L     ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 82  FINIFLDHNWLASHARE----ALRLPRLGVQLAEPQTIVVDYSAPNVAKEMHVGHVRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ K  +       +ADL+ FY+E+
Sbjct: 138 IGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLE-KQQNEDHAEMALADLEGFYREA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           K+ +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     
Sbjct: 197 KRTYDEDPEFAERARSYVVKLQGGDDYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 410
           GES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 257 GESLYNDMLPGIVSDLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTT 316

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM--- 467
           D+A  + R E  KAD ++Y  D R +  ++QA     K   +  S   +       +   
Sbjct: 317 DIACAKYRYETLKADRVLYYIDSRQHQHLVQAWTIVRKAGYVPESVPLEHHAFGMMLGKD 376

Query: 468 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEK 509
             P + R      LSD+   A Q A+  + +K   ++    K
Sbjct: 377 GRPFKTRSGGTIKLSDLLDEAYQRAYTLVREKNPEMSEAEVK 418



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/331 (38%), Positives = 194/331 (58%), Gaps = 30/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL   +     ++     ++ P L  +L     ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 82   FINIFLDHNWLASHARE----ALRLPRLGVQLAEPQTIVVDYSAPNVAKEMHVGHVRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ K  +       +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLE-KQQNEDHAEMALADLEGFYREA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            K+ +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     
Sbjct: 197  KRTYDEDPEFAERARSYVVKLQGGDDYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 1427
            GES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 257  GESLYNDMLPGIVSDLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTT 316

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+A  + R E  KAD ++Y  D R +  ++Q
Sbjct: 317  DIACAKYRYETLKADRVLYYIDSRQHQHLVQ 347


>gi|399519175|ref|ZP_10759983.1| argS [Pseudomonas pseudoalcaligenes CECT 5344]
 gi|399112999|emb|CCH36541.1| argS [Pseudomonas pseudoalcaligenes CECT 5344]
          Length = 579

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/604 (39%), Positives = 333/604 (55%), Gaps = 68/604 (11%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            DR++    L    T A+QV             +T +K     GDF  N AM L K     
Sbjct: 14   DRLTAEGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAK---PA 55

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
            G K  P D+A+ + + + ++        + I K+E+A PGF+N F        Q  D + 
Sbjct: 56   GMK--PRDLAEKLIAALPAD--------EQITKVEIAGPGFLNFF--------QNSDALA 97

Query: 593  NGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 643
              ++    + KL         RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  
Sbjct: 98   QRLEAALADTKLGVRKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDT 157

Query: 644  VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 703
            V+R NHVGDWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA 
Sbjct: 158  VIRQNHVGDWGTQFGMLLAYMQE---NPAAAESELADLEDFYRTAKKRFDESPEFADRAR 214

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPY 760
            + VV LQ  D +  + W    D+S    Q +YDRL V L+    RGES Y   + Q+V  
Sbjct: 215  ELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVRGESAYNDDLPQVVAD 274

Query: 761  LEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 815
            L  KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD
Sbjct: 275  LAAKGLLTEDNGAQCVFMDEFKNAEGKPLPLIVQKAGGGYLYATTDLAATRYRANVLKAD 334

Query: 816  WIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKL 875
             ++Y  D  Q +HF+++  CA+ AG + P    M+ +GFG + G D + FKTR G TVKL
Sbjct: 335  RVLYFVDQRQALHFQMVFACARLAGFV-PASMEMEHMGFGTMNGPDGRPFKTRDGGTVKL 393

Query: 876  SELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDK 935
             +LLDE  +R+   +KDKN   EL   EL +  + V    +KYADLS +R  DY F+FD 
Sbjct: 394  VQLLDEAEQRAYSLVKDKN--PELAEDELRQIARVVGIASVKYADLSKHRTSDYSFNFDL 451

Query: 936  MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMN 995
            ML   GNTA YLLYAYTR+ASI R  G   +++        ++L  ++E ALA  L + N
Sbjct: 452  MLSFEGNTAPYLLYAYTRVASIFRKLGKGVDEI-----GGQITLVADQEQALAGKLAQFN 506

Query: 996  DVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAK 1055
            ++L  V      H LC YLYDI+  FS FY+NC  +  + E         RL LA  T +
Sbjct: 507  ELLGNVADKGTPHMLCAYLYDIAGLFSSFYENCPILTAEDE----ATRNSRLRLAALTGR 562

Query: 1056 VMKK 1059
             +K+
Sbjct: 563  TLKQ 566



 Score =  226 bits (576), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 159/447 (35%), Positives = 228/447 (51%), Gaps = 69/447 (15%)

Query: 83  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           DR++    L    T A+QV             +T +K     GDF  N AM L K     
Sbjct: 14  DRLTAEGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAK---PA 55

Query: 143 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
           G K  P D+A+ + + + ++        + I K+E+A PGF+N F        Q  D + 
Sbjct: 56  GMK--PRDLAEKLIAALPAD--------EQITKVEIAGPGFLNFF--------QNSDALA 97

Query: 203 NGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 253
             ++    + KL         RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  
Sbjct: 98  QRLEAALADTKLGVRKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDT 157

Query: 254 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 313
           V+R NHVGDWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA 
Sbjct: 158 VIRQNHVGDWGTQFGMLLAYMQE---NPAAAESELADLEDFYRTAKKRFDESPEFADRAR 214

Query: 314 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPY 370
           + VV LQ  D +  + W    D+S    Q +YDRL V L+    RGES Y   + Q+V  
Sbjct: 215 ELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVRGESAYNDDLPQVVAD 274

Query: 371 LEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 425
           L  KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD
Sbjct: 275 LAAKGLLTEDNGAQCVFMDEFKNAEGKPLPLIVQKAGGGYLYATTDLAATRYRANVLKAD 334

Query: 426 WIVYVTDHRS--YHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVP------VRDRMSV 477
            ++Y  D R   + Q++ A A   +  G   +S          MN P       RD  +V
Sbjct: 335 RVLYFVDQRQALHFQMVFACA---RLAGFVPASMEMEHMGFGTMNGPDGRPFKTRDGGTV 391

Query: 478 RDYLSDVFTHAVQVAFPELGDKTASVA 504
           +  L  +   A Q A+  + DK   +A
Sbjct: 392 K--LVQLLDEAEQRAYSLVKDKNPELA 416



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/369 (38%), Positives = 199/369 (53%), Gaps = 56/369 (15%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            DR++    L    T A+QV             +T +K     GDF  N AM L K     
Sbjct: 14   DRLTAEGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAK---PA 55

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
            G K  P D+A+ + + + ++        + I K+E+A PGF+N F        Q  D + 
Sbjct: 56   GMK--PRDLAEKLIAALPAD--------EQITKVEIAGPGFLNFF--------QNSDALA 97

Query: 1220 NGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 1270
              ++    + KL         RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  
Sbjct: 98   QRLEAALADTKLGVRKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDT 157

Query: 1271 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 1330
            V+R NHVGDWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA 
Sbjct: 158  VIRQNHVGDWGTQFGMLLAYMQE---NPAAAESELADLEDFYRTAKKRFDESPEFADRAR 214

Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPY 1387
            + VV LQ  D +  + W    D+S    Q +YDRL V L+    RGES Y   + Q+V  
Sbjct: 215  ELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVRGESAYNDDLPQVVAD 274

Query: 1388 LEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 1442
            L  KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD
Sbjct: 275  LAAKGLLTEDNGAQCVFMDEFKNAEGKPLPLIVQKAGGGYLYATTDLAATRYRANVLKAD 334

Query: 1443 WIVYVTDHR 1451
             ++Y  D R
Sbjct: 335  RVLYFVDQR 343


>gi|397685652|ref|YP_006522971.1| arginyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
 gi|395807208|gb|AFN76613.1| arginyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
          Length = 579

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 338/598 (56%), Gaps = 62/598 (10%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            DR++    L +    A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14   DRLTAEGVLPEGLAPAIQVE------------NTRDK---SHGDFASNIAMMLAKPAGMK 58

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQ 586
                 P D+AQ +   +       P  A+V  K+E+A PGF+N F        R+ A   
Sbjct: 59   -----PRDLAQKLIEAL-------PQDAQV-SKVEIAGPGFLNFFQNTDALAGRLEAALA 105

Query: 587  IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
               + V     P      RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R
Sbjct: 106  DSQLSVRKAGAPQ-----RVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIR 160

Query: 647  LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 706
             NHVGDWGTQFGML+A+L++K     T+   +ADL+ FY+ +K+RFDE   F  RA + V
Sbjct: 161  QNHVGDWGTQFGMLLAYLEEKPAAAETE---LADLEQFYRAAKQRFDESGEFADRARELV 217

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEK 763
            V LQ  D D  + W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L  
Sbjct: 218  VKLQAGDADCLRLWTRFNDISLSHCQKIYDRLNVKLTPTDVKGESAYNAELSGIVDALRD 277

Query: 764  KGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 818
            KGLL  D+G + ++ E     +   +P+ + K+ GG+ Y T+DLAA+R R +  +AD ++
Sbjct: 278  KGLLTEDNGAQCVFLEEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQALQADRVL 337

Query: 819  YVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSEL 878
            Y  D  Q +HF++  E A++AG ++ +  +++ +GFG + G D + FKTR G TVKL +L
Sbjct: 338  YFVDQRQALHFQMAFEVARRAGFVH-DGMQLEHMGFGTMNGADGRPFKTRDGGTVKLVDL 396

Query: 879  LDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            LDE  +R+ + +K+KN   +L   EL +  +AV    +KYADLS +R  DY F+F+ ML 
Sbjct: 397  LDEAEQRAYNLVKEKN--PDLDEAELRQIARAVGISAVKYADLSKHRTSDYRFNFELMLS 454

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
              GNTA YLLYAYTR+AS+ R  G   +++       P+ LE E+E ALA  L +  + L
Sbjct: 455  FEGNTAPYLLYAYTRVASVFRKLGKGIDEI-----DGPIQLEAEQELALAARLAQFGETL 509

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
              V      H LC YLYD++  FS FY++C  +  + E + ++    RL LA  T K 
Sbjct: 510  NNVGEKGEPHLLCSYLYDLAGLFSSFYEHCPILTAETEQQKQS----RLRLAALTGKT 563



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 146/366 (39%), Positives = 201/366 (54%), Gaps = 50/366 (13%)

Query: 83  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           DR++    L +    A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14  DRLTAEGVLPEGLAPAIQVE------------NTRDK---SHGDFASNIAMMLAKPAGMK 58

Query: 143 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQ 196
                P D+AQ +   +       P  A+V  K+E+A PGF+N F        R+ A   
Sbjct: 59  -----PRDLAQKLIEAL-------PQDAQV-SKVEIAGPGFLNFFQNTDALAGRLEAALA 105

Query: 197 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
              + V     P      RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R
Sbjct: 106 DSQLSVRKAGAPQ-----RVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIR 160

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
            NHVGDWGTQFGML+A+L++K     T+   +ADL+ FY+ +K+RFDE   F  RA + V
Sbjct: 161 QNHVGDWGTQFGMLLAYLEEKPAAAETE---LADLEQFYRAAKQRFDESGEFADRARELV 217

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEK 373
           V LQ  D D  + W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L  
Sbjct: 218 VKLQAGDADCLRLWTRFNDISLSHCQKIYDRLNVKLTPTDVKGESAYNAELSGIVDALRD 277

Query: 374 KGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 428
           KGLL  D+G + ++ E     +   +P+ + K+ GG+ Y T+DLAA+R R +  +AD ++
Sbjct: 278 KGLLTEDNGAQCVFLEEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQALQADRVL 337

Query: 429 YVTDHR 434
           Y  D R
Sbjct: 338 YFVDQR 343



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 146/366 (39%), Positives = 201/366 (54%), Gaps = 50/366 (13%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            DR++    L +    A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14   DRLTAEGVLPEGLAPAIQVE------------NTRDK---SHGDFASNIAMMLAKPAGMK 58

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQ 1213
                 P D+AQ +   +       P  A+V  K+E+A PGF+N F        R+ A   
Sbjct: 59   -----PRDLAQKLIEAL-------PQDAQV-SKVEIAGPGFLNFFQNTDALAGRLEAALA 105

Query: 1214 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
               + V     P      RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R
Sbjct: 106  DSQLSVRKAGAPQ-----RVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIR 160

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
             NHVGDWGTQFGML+A+L++K     T+   +ADL+ FY+ +K+RFDE   F  RA + V
Sbjct: 161  QNHVGDWGTQFGMLLAYLEEKPAAAETE---LADLEQFYRAAKQRFDESGEFADRARELV 217

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEK 1390
            V LQ  D D  + W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L  
Sbjct: 218  VKLQAGDADCLRLWTRFNDISLSHCQKIYDRLNVKLTPTDVKGESAYNAELSGIVDALRD 277

Query: 1391 KGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 1445
            KGLL  D+G + ++ E     +   +P+ + K+ GG+ Y T+DLAA+R R +  +AD ++
Sbjct: 278  KGLLTEDNGAQCVFLEEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQALQADRVL 337

Query: 1446 YVTDHR 1451
            Y  D R
Sbjct: 338  YFVDQR 343


>gi|255066448|ref|ZP_05318303.1| arginine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049328|gb|EET44792.1| arginine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 572

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/563 (42%), Positives = 324/563 (57%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDSLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENAKAEFIGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGAGEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +  +AA   P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAG----EWDMAA---PTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY  +T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEACPILK--AEGATR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/418 (37%), Positives = 219/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIHAALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDSLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +  ++ ++  G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG  + A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGAGEAAKIGKTVGIGAVKYADLSKN 436



 Score =  223 bits (567), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDSLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|304396251|ref|ZP_07378133.1| arginyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356620|gb|EFM20985.1| arginyl-tRNA synthetase [Pantoea sp. aB]
          Length = 594

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/568 (38%), Positives = 330/568 (58%), Gaps = 42/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 53   QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 99

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +     +  +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 100  FINIFLDHNWLATHARQALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHVRSTII 156

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ-DKFPDYLTKSPPIADLQAFYKES 688
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+  +  D+   +  +ADL+ FY+E+
Sbjct: 157  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNEDHAEMA--LADLEGFYREA 214

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            K+ +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     
Sbjct: 215  KRTYDEDPEFAERARSYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVM 274

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 800
            GES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 275  GESLYNDMLPGIVSDLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTT 334

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+A  + R E  KA+ ++Y  D  Q  H        +KAG + P    ++   FG++LG+
Sbjct: 335  DIACAKYRYETLKANRVLYYIDSRQHQHLVQAWTIVRKAGYV-PESVPLEHHAFGMMLGK 393

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D + FKTRSG T+KLS+LLDE  +R+   +++KN   E++  E+    + V    +KYAD
Sbjct: 394  DGRPFKTRSGGTIKLSDLLDEAYQRAYSLVREKN--PEMSEAEVKTLAEVVGISAVKYAD 451

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGIN++ L        + + 
Sbjct: 452  LSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGINADSL-----DAEIVIS 506

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             E+E  LA  LL+  +V+  V RD   H +C YLYD++  FS FY++C  +  +++    
Sbjct: 507  EEREAQLATRLLQFEEVITQVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAESDA--- 563

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 RL LA  TAK +K+  D L I T
Sbjct: 564  -TRLSRLQLAALTAKTLKQGLDTLGIDT 590



 Score =  229 bits (585), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 219/402 (54%), Gaps = 33/402 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 53  QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 99

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +     +  +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 100 FINIFLDHNWLATHARQALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHVRSTII 156

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ-DKFPDYLTKSPPIADLQAFYKES 298
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+  +  D+   +  +ADL+ FY+E+
Sbjct: 157 GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNEDHAEMA--LADLEGFYREA 214

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           K+ +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     
Sbjct: 215 KRTYDEDPEFAERARSYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVM 274

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 410
           GES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 275 GESLYNDMLPGIVSDLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTT 334

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM--- 467
           D+A  + R E  KA+ ++Y  D R +  ++QA     K   +  S   +       +   
Sbjct: 335 DIACAKYRYETLKANRVLYYIDSRQHQHLVQAWTIVRKAGYVPESVPLEHHAFGMMLGKD 394

Query: 468 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEK 509
             P + R      LSD+   A Q A+  + +K   ++    K
Sbjct: 395 GRPFKTRSGGTIKLSDLLDEAYQRAYSLVREKNPEMSEAEVK 436



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/331 (38%), Positives = 196/331 (59%), Gaps = 30/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 53   QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 99

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +     +  +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 100  FINIFLDHNWLATHARQALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHVRSTII 156

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ-DKFPDYLTKSPPIADLQAFYKES 1315
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+  +  D+   +  +ADL+ FY+E+
Sbjct: 157  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNEDHAEMA--LADLEGFYREA 214

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            K+ +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     
Sbjct: 215  KRTYDEDPEFAERARSYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVM 274

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 1427
            GES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 275  GESLYNDMLPGIVSDLKQKGLAVESEGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTT 334

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+A  + R E  KA+ ++Y  D R +  ++Q
Sbjct: 335  DIACAKYRYETLKANRVLYYIDSRQHQHLVQ 365


>gi|197284974|ref|YP_002150846.1| arginyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|238693143|sp|B4ETN5.1|SYR_PROMH RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|194682461|emb|CAR42387.1| arginyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 576

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 230/611 (37%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++ +LS+  + A+  A    G    S     +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAFLSEKISMAMSAA----GAPADSEPLVRQSAKVQFGDYQANGVMGAAKKMGIP-- 54

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 588
               P  +A+ I   +         +  + DK+E+A PGF+N+FLS V+  +Q +      
Sbjct: 55   ---PRQLAEKILEHL--------DITDIADKVEIAGPGFINIFLSPVWVAQQAEFALADE 103

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + +  V P T      +++D+SSPN+AK+MHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104  HLNITKVTPET------IVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            H+GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE+F +RA   VV 
Sbjct: 158  HLGDWGTQFGMLIAYLEKK-QNENAADMALADLEEFYREAKKCYDEDEVFAERARNYVVR 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W  + D++ +  Q  Y RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRTMWRKLVDITMQQNQLTYQRLNVTLTEDDIMGESLYNPMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A+ +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHEQLHANRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D + FKTRSG TV+L++
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYI-PDSMSLEHHMFGMMLGKDGRPFKTRSGGTVRLTD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  +++KN   ++   EL+   + V  G +KYADLS NR  DY+F +D ML
Sbjct: 393  LLDEAHERALTLIREKN--PDMDEEELNNIARVVGIGAVKYADLSKNRTTDYIFDWDLML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + A I+      +A + P+SL    E  LA  L++ ++ 
Sbjct: 451  SFEGNTAPYMQYAYTRVASIFKRADIDE-----SALTQPISLTQPHEKQLALRLVQFDET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++ +FS FY+NC  +  + +     V   RL LA  TA+ +
Sbjct: 506  ITQVAREGTPHVMCAYLYDLAQSFSGFYENCPILSAEDD----NVRQSRLKLARLTARTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  + L I T
Sbjct: 562  KQGLETLGIET 572



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 207/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++ +LS+  + A+  A    G    S     +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAFLSEKISMAMSAA----GAPADSEPLVRQSAKVQFGDYQANGVMGAAKKMGIP-- 54

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 198
              P  +A+ I   +         +  + DK+E+A PGF+N+FLS V+  +Q +      
Sbjct: 55  ---PRQLAEKILEHL--------DITDIADKVEIAGPGFINIFLSPVWVAQQAEFALADE 103

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + +  V P T      +++D+SSPN+AK+MHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104 HLNITKVTPET------IVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           H+GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE+F +RA   VV 
Sbjct: 158 HLGDWGTQFGMLIAYLEKK-QNENAADMALADLEEFYREAKKCYDEDEVFAERARNYVVR 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W  + D++ +  Q  Y RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRTMWRKLVDITMQQNQLTYQRLNVTLTEDDIMGESLYNPMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A+ +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHEQLHANRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 206/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++ +LS+  + A+  A    G    S     +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAFLSEKISMAMSAA----GAPADSEPLVRQSAKVQFGDYQANGVMGAAKKMGIP-- 54

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 1215
               P  +A+ I   +         +  + DK+E+A PGF+N+FLS V+  +Q +      
Sbjct: 55   ---PRQLAEKILEHL--------DITDIADKVEIAGPGFINIFLSPVWVAQQAEFALADE 103

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + +  V P T      +++D+SSPN+AK+MHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104  HLNITKVTPET------IVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            H+GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE+F +RA   VV 
Sbjct: 158  HLGDWGTQFGMLIAYLEKK-QNENAADMALADLEEFYREAKKCYDEDEVFAERARNYVVR 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W  + D++ +  Q  Y RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRTMWRKLVDITMQQNQLTYQRLNVTLTEDDIMGESLYNPMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A+ +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHEQLHANRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|262276201|ref|ZP_06054010.1| arginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262220009|gb|EEY71325.1| arginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 576

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/576 (39%), Positives = 333/576 (57%), Gaps = 34/576 (5%)

Query: 501  ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 560
             S A+  +    +FGD+Q N  M + K         NP + AQ +  V+         L 
Sbjct: 23   GSPAAVRQSAKPQFGDYQANGIMGVAKKLG-----CNPREFAQKVLDVL--------ELD 69

Query: 561  KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
             +  K E+A PGF+N+FLS  +  EQ    + +        +K  ++VD+S+PN+AKEMH
Sbjct: 70   GMASKTEIAGPGFINIFLSSEWLAEQADAALASDRLGVAEAEKQNIVVDYSAPNVAKEMH 129

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
            VGHLRSTIIGD + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+         S  ++D
Sbjct: 130  VGHLRSTIIGDAVVRTLEFLGHNVIRANHLGDWGTQFGMLIANLERHEAQGGDISMDLSD 189

Query: 681  LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 740
            ++ FY+ESKK +DEDE F K A   VV LQ  D   K+ W+ +  ++    Q+ YDRLNV
Sbjct: 190  IEGFYRESKKLYDEDEEFAKTARNYVVRLQSGDEYCKEKWQQLVKITLEQNQRNYDRLNV 249

Query: 741  TLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSD 792
            +LT++   GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K D
Sbjct: 250  SLTDKDVMGESMYNDMLAGIVEDLKAKGLAVEDDGAMVVFLDEYKNKDGEPMGVIIQKRD 309

Query: 793  GGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFV 852
            GGF Y T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++  
Sbjct: 310  GGFLYTTTDIACAKYRYETFNADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PETMSLEHH 368

Query: 853  GFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVA 912
             FG++LG+D K FKTR+G TV+L++LLDE   R+   +++KN   EL+  E +     VA
Sbjct: 369  AFGMMLGKDGKPFKTRAGGTVRLADLLDEAEARANKLIEEKN--PELSAEEKANIATTVA 426

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS +R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AGI+++++    
Sbjct: 427  MAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFNKAGIDADNIE--- 483

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
                + +  +KE AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  + 
Sbjct: 484  --GKIIVAEDKEKALVSKLLQFEEAVDGVAREGQPHIMCGYLFELAGTFSSFYEACPIL- 540

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             +AEG+ K     RL LA  TAK +K+  ++L I+T
Sbjct: 541  -NAEGETK---QSRLKLAALTAKTIKQGLELLGIKT 572



 Score =  243 bits (621), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 197/340 (57%), Gaps = 21/340 (6%)

Query: 111 ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 170
            S A+  +    +FGD+Q N  M + K         NP + AQ +  V+         L 
Sbjct: 23  GSPAAVRQSAKPQFGDYQANGIMGVAKKLG-----CNPREFAQKVLDVL--------ELD 69

Query: 171 KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 230
            +  K E+A PGF+N+FLS  +  EQ    + +        +K  ++VD+S+PN+AKEMH
Sbjct: 70  GMASKTEIAGPGFINIFLSSEWLAEQADAALASDRLGVAEAEKQNIVVDYSAPNVAKEMH 129

Query: 231 VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 290
           VGHLRSTIIGD + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+         S  ++D
Sbjct: 130 VGHLRSTIIGDAVVRTLEFLGHNVIRANHLGDWGTQFGMLIANLERHEAQGGDISMDLSD 189

Query: 291 LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 350
           ++ FY+ESKK +DEDE F K A   VV LQ  D   K+ W+ +  ++    Q+ YDRLNV
Sbjct: 190 IEGFYRESKKLYDEDEEFAKTARNYVVRLQSGDEYCKEKWQQLVKITLEQNQRNYDRLNV 249

Query: 351 TLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSD 402
           +LT++   GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K D
Sbjct: 250 SLTDKDVMGESMYNDMLAGIVEDLKAKGLAVEDDGAMVVFLDEYKNKDGEPMGVIIQKRD 309

Query: 403 GGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           GGF Y T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 310 GGFLYTTTDIACAKYRYETFNADRVLYFIDSRQHQHLMQA 349



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/339 (39%), Positives = 196/339 (57%), Gaps = 21/339 (6%)

Query: 1128 ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 1187
             S A+  +    +FGD+Q N  M + K         NP + AQ +  V+         L 
Sbjct: 23   GSPAAVRQSAKPQFGDYQANGIMGVAKKLG-----CNPREFAQKVLDVL--------ELD 69

Query: 1188 KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 1247
             +  K E+A PGF+N+FLS  +  EQ    + +        +K  ++VD+S+PN+AKEMH
Sbjct: 70   GMASKTEIAGPGFINIFLSSEWLAEQADAALASDRLGVAEAEKQNIVVDYSAPNVAKEMH 129

Query: 1248 VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 1307
            VGHLRSTIIGD + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+         S  ++D
Sbjct: 130  VGHLRSTIIGDAVVRTLEFLGHNVIRANHLGDWGTQFGMLIANLERHEAQGGDISMDLSD 189

Query: 1308 LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 1367
            ++ FY+ESKK +DEDE F K A   VV LQ  D   K+ W+ +  ++    Q+ YDRLNV
Sbjct: 190  IEGFYRESKKLYDEDEEFAKTARNYVVRLQSGDEYCKEKWQQLVKITLEQNQRNYDRLNV 249

Query: 1368 TLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSD 1419
            +LT++   GES Y   +  +V  L+ KGL   DDG  +++ +   ++   PM ++  K D
Sbjct: 250  SLTDKDVMGESMYNDMLAGIVEDLKAKGLAVEDDGAMVVFLDEYKNKDGEPMGVIIQKRD 309

Query: 1420 GGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            GGF Y T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 310  GGFLYTTTDIACAKYRYETFNADRVLYFIDSRQHQHLMQ 348


>gi|90580068|ref|ZP_01235876.1| arginyl-tRNA synthetase [Photobacterium angustum S14]
 gi|90438953|gb|EAS64136.1| arginyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 576

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 216/564 (38%), Positives = 331/564 (58%), Gaps = 34/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +   +         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDCL--------ELDGIAEKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL++ +  E+ ++ + +            ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLNKAWLAERGEEALKDERLAVNTETAQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA++Q K  +    S  I+DL+ FY+ESK  +
Sbjct: 142  VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMDISDLEGFYRESKVLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F K A   VV LQ  D    + W+ +  ++ +  Q+ YDRL+V+LT+    GES 
Sbjct: 202  DEDEEFGKTARNFVVRLQSGDEYCLEKWKQLVAITLKQNQRNYDRLSVSLTDDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL    DG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262  YNDMLPGVVADLKEKGLAVESDGAIVVYLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H  +  E  +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEQLHADRVLYFIDSRQHQHLMMAWEIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE + R+   +++KN   EL+  E +   Q VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAVERANKLIEEKN--PELSTEEKANIAQTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI + A +   DL     + P+ +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFKRANVELVDL-----THPIVITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  +     + V  
Sbjct: 494  QALLSKLLQFEEAVQSVAREGQPHLMCTYLFELAGMFSSFYEACPILNAE-----EAVKQ 548

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T+K +K+  D+L I T
Sbjct: 549  SRLKLALLTSKTIKQGLDLLGIET 572



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/415 (35%), Positives = 225/415 (54%), Gaps = 34/415 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +   +         L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDCL--------ELDGIAEKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL++ +  E+ ++ + +            ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLNKAWLAERGEEALKDERLAVNTETAQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA++Q K  +    S  I+DL+ FY+ESK  +
Sbjct: 142 VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMDISDLEGFYRESKVLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F K A   VV LQ  D    + W+ +  ++ +  Q+ YDRL+V+LT+    GES 
Sbjct: 202 DEDEEFGKTARNFVVRLQSGDEYCLEKWKQLVAITLKQNQRNYDRLSVSLTDDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL    DG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262 YNDMLPGVVADLKEKGLAVESDGAIVVYLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM----NVP 470
            + R E+  AD ++Y  D R  HQ L    E  +K G    S S        M      P
Sbjct: 322 AKYRYEQLHADRVLYFIDSRQ-HQHLMMAWEIVRKAGYVPESVSLEHHAFGMMLGKDGRP 380

Query: 471 VRDRMSVRDYLSDVFTHAVQVA-------FPELG-DKTASVASTNEKYVHKFGDF 517
            + R      L+D+   AV+ A        PEL  ++ A++A T      K+ D 
Sbjct: 381 FKTRAGGTVRLADLLDEAVERANKLIEEKNPELSTEEKANIAQTVAMAAVKYSDL 435



 Score =  233 bits (595), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/326 (38%), Positives = 194/326 (59%), Gaps = 21/326 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +   +         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDCL--------ELDGIAEKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL++ +  E+ ++ + +            ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLNKAWLAERGEEALKDERLAVNTETAQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA++Q K  +    S  I+DL+ FY+ESK  +
Sbjct: 142  VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMDISDLEGFYRESKVLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F K A   VV LQ  D    + W+ +  ++ +  Q+ YDRL+V+LT+    GES 
Sbjct: 202  DEDEEFGKTARNFVVRLQSGDEYCLEKWKQLVAITLKQNQRNYDRLSVSLTDDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL    DG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262  YNDMLPGVVADLKEKGLAVESDGAIVVYLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVL 1457
             + R E+  AD ++Y  D R +  ++
Sbjct: 322  AKYRYEQLHADRVLYFIDSRQHQHLM 347


>gi|227355376|ref|ZP_03839777.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|425067932|ref|ZP_18471048.1| arginyl-tRNA synthetase [Proteus mirabilis WGLW6]
 gi|425072669|ref|ZP_18475775.1| arginyl-tRNA synthetase [Proteus mirabilis WGLW4]
 gi|227164600|gb|EEI49471.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|404596443|gb|EKA96963.1| arginyl-tRNA synthetase [Proteus mirabilis WGLW4]
 gi|404600670|gb|EKB01100.1| arginyl-tRNA synthetase [Proteus mirabilis WGLW6]
          Length = 576

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 230/611 (37%), Positives = 343/611 (56%), Gaps = 56/611 (9%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++ +LS+  + A+  A    G    S     +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAFLSEKISMAMSAA----GAPADSEPLVRQSAKVQFGDYQANGVMGAAKKMGIP-- 54

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 588
               P  +A+ I   +         +  + DK+E+A PGF+N+FLS V+  +Q +      
Sbjct: 55   ---PRQLAEKILEHL--------DITDIADKVEIAGPGFINIFLSPVWVAQQAEFALADE 103

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + +  V P T      +++D+SSPN+AK+MHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104  HLNITKVTPET------IVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            H+GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE+F +RA   VV 
Sbjct: 158  HLGDWGTQFGMLIAYLEKKQNEN-AADMALADLEEFYREAKKCYDEDEVFAERARNYVVR 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   +  W  + D++ +  Q  Y RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRTMWRKLVDITMQQNQLTYQRLNVTLTEDDIMGESLYNPMLPGIVADLKAKG 276

Query: 766  LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A+ +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHEQLHANRV 333

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +Y  D  Q  H        +KAG + P+   ++   FG++LG+D + FKTRSG TV+L++
Sbjct: 334  LYYIDSRQHQHLMQAWTIVRKAGYI-PDSMSLEHHMFGMMLGKDGRPFKTRSGGTVRLTD 392

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE   R+L  +++KN   ++   EL+   + V  G +KYADLS NR  DY+F +D ML
Sbjct: 393  LLDEAHERALTLIREKN--PDMDEEELNNIARVVGIGAVKYADLSKNRTTDYIFDWDLML 450

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               GNTA Y+ YAYTR+ASI + A I+      +A + P+SL    E  LA  L++ ++ 
Sbjct: 451  SFEGNTAPYMQYAYTRVASIFKRAEIDE-----SALTQPISLTQPHEKQLALRLVQFDET 505

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V R+   H +C YLYD++ +FS FY+NC  +  + +     V   RL LA  TA+ +
Sbjct: 506  ITQVAREGTPHVMCAYLYDLAQSFSGFYENCPILSAEDD----NVRQSRLKLARLTARTL 561

Query: 1058 KKCFDILNIRT 1068
            K+  + L I T
Sbjct: 562  KQGLETLGIET 572



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 207/375 (55%), Gaps = 44/375 (11%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++ +LS+  + A+  A    G    S     +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAFLSEKISMAMSAA----GAPADSEPLVRQSAKVQFGDYQANGVMGAAKKMGIP-- 54

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 198
              P  +A+ I   +         +  + DK+E+A PGF+N+FLS V+  +Q +      
Sbjct: 55  ---PRQLAEKILEHL--------DITDIADKVEIAGPGFINIFLSPVWVAQQAEFALADE 103

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + +  V P T      +++D+SSPN+AK+MHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104 HLNITKVTPET------IVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           H+GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE+F +RA   VV 
Sbjct: 158 HLGDWGTQFGMLIAYLEKKQNEN-AADMALADLEEFYREAKKCYDEDEVFAERARNYVVR 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   +  W  + D++ +  Q  Y RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217 LQGGDEYCRTMWRKLVDITMQQNQLTYQRLNVTLTEDDIMGESLYNPMLPGIVADLKAKG 276

Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
           L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A+ +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHEQLHANRV 333

Query: 428 VYVTDHRSYHQVLQA 442
           +Y  D R +  ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 206/374 (55%), Gaps = 44/374 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++ +LS+  + A+  A    G    S     +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAFLSEKISMAMSAA----GAPADSEPLVRQSAKVQFGDYQANGVMGAAKKMGIP-- 54

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 1215
               P  +A+ I   +         +  + DK+E+A PGF+N+FLS V+  +Q +      
Sbjct: 55   ---PRQLAEKILEHL--------DITDIADKVEIAGPGFINIFLSPVWVAQQAEFALADE 103

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + +  V P T      +++D+SSPN+AK+MHVGHLRSTIIGD  +R L +LGH+V+R N
Sbjct: 104  HLNITKVTPET------IVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            H+GDWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE+F +RA   VV 
Sbjct: 158  HLGDWGTQFGMLIAYLEKKQNEN-AADMALADLEEFYREAKKCYDEDEVFAERARNYVVR 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +  W  + D++ +  Q  Y RLNVTLTE    GES Y   +  +V  L+ KG
Sbjct: 217  LQGGDEYCRTMWRKLVDITMQQNQLTYQRLNVTLTEDDIMGESLYNPMLPGIVADLKAKG 276

Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
            L    +G  +++        GE  G I   I K DGG+ Y T+D+A  + R E+  A+ +
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRHEQLHANRV 333

Query: 1445 VYVTDHRSYHQVLQ 1458
            +Y  D R +  ++Q
Sbjct: 334  LYYIDSRQHQHLMQ 347


>gi|89073534|ref|ZP_01160057.1| arginyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050798|gb|EAR56279.1| arginyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 576

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/564 (38%), Positives = 331/564 (58%), Gaps = 34/564 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +   +         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDCL--------ELDGIAEKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL++ +  E+ ++ + +            ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLNKAWLAERGEEALKDERLAVNTETAQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA++Q K  +    S  I+DL+ FY+ESK  +
Sbjct: 142  VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMNISDLEGFYRESKVLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F K A   VV LQ  D    + W+ +  ++ +  Q+ YDRL+V+LT+    GES 
Sbjct: 202  DEDEEFGKTARNFVVRLQSGDEYCLEKWKQLVAITLKQNQRNYDRLSVSLTDDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL    DG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262  YNDMLSGVVADLKEKGLAVESDGATVVYLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H  +     +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEQLHADRVLYFIDSRQHQHLMMAWAIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE + R+   +++KN   EL+  E +   Q VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAVERANKLIEEKN--PELSAEEKANIAQTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI + A +   DL     + P+ +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFKRANVELSDL-----THPIVITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + EG    V  
Sbjct: 494  QALLSKLLQFEEAVQSVAREGQPHLMCTYLFELAGMFSSFYEACPILNAE-EG----VKQ 548

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  T+K +K+  D+L I T
Sbjct: 549  SRLKLALLTSKTIKQGLDLLGIET 572



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/414 (35%), Positives = 226/414 (54%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +   +         L  + +K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDCL--------ELDGIAEKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL++ +  E+ ++ + +            ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLNKAWLAERGEEALKDERLAVNTETAQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA++Q K  +    S  I+DL+ FY+ESK  +
Sbjct: 142 VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMNISDLEGFYRESKVLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F K A   VV LQ  D    + W+ +  ++ +  Q+ YDRL+V+LT+    GES 
Sbjct: 202 DEDEEFGKTARNFVVRLQSGDEYCLEKWKQLVAITLKQNQRNYDRLSVSLTDDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL    DG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262 YNDMLSGVVADLKEKGLAVESDGATVVYLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E+  AD ++Y  D R +  ++ A A   K   +  S S +       +     P 
Sbjct: 322 AKYRYEQLHADRVLYFIDSRQHQHLMMAWAIVRKAGYVPESVSLEHHAFGMMLGKDGRPF 381

Query: 472 RDRMSVRDYLSDVFTHAVQVA-------FPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   AV+ A        PEL  ++ A++A T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAVERANKLIEEKNPELSAEEKANIAQTVAMAAVKYSDL 435



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/326 (38%), Positives = 194/326 (59%), Gaps = 21/326 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +   +         L  + +K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVIDCL--------ELDGIAEKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL++ +  E+ ++ + +            ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLNKAWLAERGEEALKDERLAVNTETAQNIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA++Q K  +    S  I+DL+ FY+ESK  +
Sbjct: 142  VVRTLEFLGHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMNISDLEGFYRESKVLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F K A   VV LQ  D    + W+ +  ++ +  Q+ YDRL+V+LT+    GES 
Sbjct: 202  DEDEEFGKTARNFVVRLQSGDEYCLEKWKQLVAITLKQNQRNYDRLSVSLTDDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL    DG  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 262  YNDMLSGVVADLKEKGLAVESDGATVVYLDEYKNKDGEPMGVIIQKRDGGYLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVL 1457
             + R E+  AD ++Y  D R +  ++
Sbjct: 322  AKYRYEQLHADRVLYFIDSRQHQHLM 347


>gi|241760366|ref|ZP_04758461.1| arginine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319244|gb|EER55722.1| arginine--tRNA ligase [Neisseria flavescens SK114]
          Length = 572

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/568 (41%), Positives = 321/568 (56%), Gaps = 51/568 (8%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF
Sbjct: 35   FGDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGF 81

Query: 574  VNVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            +N+ L   +  + I+         I    QP T      V++D+SSPN+AKEMHVGHLRS
Sbjct: 82   INLRLRPDFLAQNIQTALNDARFGIAKTAQPQT------VVIDYSSPNLAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            +IIGD+ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+
Sbjct: 136  SIIGDSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYR 193

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
             +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L    
Sbjct: 194  AAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPED 253

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYD 798
              GES Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y 
Sbjct: 254  VAGESKYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYA 313

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            ++DLA +R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++
Sbjct: 314  STDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDAKAEFIGFGTMM 372

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KY
Sbjct: 373  GKDGKPFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKY 430

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  
Sbjct: 431  ADLSKNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDTN-------EPTV 483

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L    E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  +EG 
Sbjct: 484  LTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--SEGA 541

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             +     RL LA+ T   +K+   +L I
Sbjct: 542  TR---NSRLQLAKLTGDTLKQGLGLLGI 566



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/423 (37%), Positives = 219/423 (51%), Gaps = 47/423 (11%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF
Sbjct: 35  FGDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGF 81

Query: 184 VNVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           +N+ L   +  + I+         I    QP T      V++D+SSPN+AKEMHVGHLRS
Sbjct: 82  INLRLRPDFLAQNIQTALNDARFGIAKTAQPQT------VVIDYSSPNLAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           +IIGD+ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+
Sbjct: 136 SIIGDSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYR 193

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L    
Sbjct: 194 AAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPED 253

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYD 408
             GES Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y 
Sbjct: 254 VAGESKYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYA 313

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM- 467
           ++DLA +R RI   KAD ++YV DHR      Q      K   +   + ++  G    M 
Sbjct: 314 STDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMG 373

Query: 468 --NVPVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDF 517
               P + R      L D+ T AV+ A        PELG D+ A +  T      K+ D 
Sbjct: 374 KDGKPFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADL 433

Query: 518 QCN 520
             N
Sbjct: 434 SKN 436



 Score =  226 bits (576), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 187/326 (57%), Gaps = 36/326 (11%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF
Sbjct: 35   FGDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGF 81

Query: 1201 VNVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            +N+ L   +  + I+         I    QP T      V++D+SSPN+AKEMHVGHLRS
Sbjct: 82   INLRLRPDFLAQNIQTALNDARFGIAKTAQPQT------VVIDYSSPNLAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            +IIGD+ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+
Sbjct: 136  SIIGDSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYR 193

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
             +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L    
Sbjct: 194  AAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPED 253

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYD 1425
              GES Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y 
Sbjct: 254  VAGESKYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYA 313

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHR 1451
            ++DLA +R RI   KAD ++YV DHR
Sbjct: 314  STDLACLRYRIGRLKADRLLYVVDHR 339


>gi|385788609|ref|YP_005819718.1| arginyl-tRNA synthetase [Erwinia sp. Ejp617]
 gi|310767881|gb|ADP12831.1| arginyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 576

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 332/570 (58%), Gaps = 46/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K         N     + +A  V  +L     L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAK---------NLGMPPRQLAEKVLEQL----DLSGIAHKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL+  +   QI  ++      ++ V+P T      V++D+S+PN+AKEMHVGH+RS
Sbjct: 82   FINIFLAPQWLSAQIDSVLRAPKLGISPVEPKT------VVIDYSAPNVAKEMHVGHVRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD  +R L +LGH V+R NHVGDWGTQFGMLIA L+ +  ++  ++  +ADL+AFY+
Sbjct: 136  TIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEH-QETLALADLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
            E+K+ +DED  F +RA   VV LQ  D   +K W+ + D++    Q IYDR+NVTL    
Sbjct: 195  EAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNVTLARDD 254

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L+ KGL    DG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPGIVADLKAKGLAVESDGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E  KAD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLKADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PENIPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLS+LLDE + R+   + +KN   ++   EL      V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTIKLSDLLDEAIDRATRLVAEKN--PDMPAGELKALANIVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI++E     A S    
Sbjct: 432  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDAE-----AVSGTTR 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E ALA  LL+ ++ +  V RD   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 487  IIEDREAALAVRLLQFDETITQVARDGMPHVMCAYLYDLAGLFSGFYEHCPILNAEDEAT 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             ++    RL LA  TAK +K+  D L I T
Sbjct: 547  KQS----RLRLALLTAKTLKQGLDTLGIAT 572



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 199/334 (59%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K         N     + +A  V  +L     L+ +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAK---------NLGMPPRQLAEKVLEQL----DLSGIAHKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL+  +   QI  ++      ++ V+P T      V++D+S+PN+AKEMHVGH+RS
Sbjct: 82  FINIFLAPQWLSAQIDSVLRAPKLGISPVEPKT------VVIDYSAPNVAKEMHVGHVRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD  +R L +LGH V+R NHVGDWGTQFGMLIA L+ +  ++  ++  +ADL+AFY+
Sbjct: 136 TIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEH-QETLALADLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
           E+K+ +DED  F +RA   VV LQ  D   +K W+ + D++    Q IYDR+NVTL    
Sbjct: 195 EAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNVTLARDD 254

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L+ KGL    DG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255 VMGESLYNDMLPGIVADLKAKGLAVESDGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E  KAD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLKADRVLYYIDSRQHQHLMQA 348



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 198/333 (59%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K         N     + +A  V  +L     L+ +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAK---------NLGMPPRQLAEKVLEQL----DLSGIAHKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL+  +   QI  ++      ++ V+P T      V++D+S+PN+AKEMHVGH+RS
Sbjct: 82   FINIFLAPQWLSAQIDSVLRAPKLGISPVEPKT------VVIDYSAPNVAKEMHVGHVRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD  +R L +LGH V+R NHVGDWGTQFGMLIA L+ +  ++  ++  +ADL+AFY+
Sbjct: 136  TIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEH-QETLALADLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
            E+K+ +DED  F +RA   VV LQ  D   +K W+ + D++    Q IYDR+NVTL    
Sbjct: 195  EAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNVTLARDD 254

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L+ KGL    DG  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPGIVADLKAKGLAVESDGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E  KAD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLKADRVLYYIDSRQHQHLMQ 347


>gi|261343877|ref|ZP_05971522.1| arginine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568263|gb|EFB73798.1| arginine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 576

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 231/605 (38%), Positives = 334/605 (55%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKVSAAMLAA----GAPEGCDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ I S        +  L  +  K+E+A PGF+N+F+   +     +  + + 
Sbjct: 53   -MPPRQLAEQIVS--------HLDLEGIATKVEIAGPGFINIFIDPTWVATYAEQALTSD 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E+LGH V+R NHVG
Sbjct: 104  RLGIAPV---KPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDASDMALADLEAFYREAKKHYDEDEDFAVRARGYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYHRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TV+LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMALEHHMFGMMLGKDGKPFKTRSGGTVRLSDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +++KN   ++   EL      V  G +KYADLS NR  DY+F +D ML   GNT
Sbjct: 399  ERAQTLIREKN--PDMPEDELLNLANVVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+ASI + A I   DL     + P+ LE   E  LA  L++  + ++ V R
Sbjct: 457  APYMQYAYTRVASIFKKANITEADL-----TLPIVLEAPHEIVLATRLMQFEETILTVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   H +C YLYD++  FS FY++C  +  D + + ++    RL LA  T K +K   D 
Sbjct: 512  DGTPHVMCAYLYDLAGLFSSFYEHCPILSADNDAQRQS----RLKLALLTQKTLKVGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIET 572



 Score =  228 bits (582), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 203/369 (55%), Gaps = 32/369 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAILSDKVSAAMLAA----GAPEGCDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ I S        +  L  +  K+E+A PGF+N+F+   +     +  + + 
Sbjct: 53  -MPPRQLAEQIVS--------HLDLEGIATKVEIAGPGFINIFIDPTWVATYAEQALTSD 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E+LGH V+R NHVG
Sbjct: 104 RLGIAPV---KPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KVQNEDASDMALADLEAFYREAKKHYDEDEDFAVRARGYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRKMWRKLVDITMQQNQETYHRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280 ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 434 RSYHQVLQA 442
           R +  ++QA
Sbjct: 340 RQHQHLMQA 348



 Score =  227 bits (578), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/368 (36%), Positives = 202/368 (54%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKVSAAMLAA----GAPEGCDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ I S        +  L  +  K+E+A PGF+N+F+   +     +  + + 
Sbjct: 53   -MPPRQLAEQIVS--------HLDLEGIATKVEIAGPGFINIFIDPTWVATYAEQALTSD 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E+LGH V+R NHVG
Sbjct: 104  RLGIAPV---KPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDASDMALADLEAFYREAKKHYDEDEDFAVRARGYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYHRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|260772372|ref|ZP_05881288.1| arginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611511|gb|EEX36714.1| arginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 577

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/571 (39%), Positives = 328/571 (57%), Gaps = 47/571 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----MNPREFAQKVIDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FLS  +  +Q +       + VN  +P T      ++VD+S+PN+AKEMHVGHLRS
Sbjct: 82   FINIFLSETFLAQQAELALADAHLGVNKAEPQT------IVVDYSAPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+         S  +ADL+AFY+
Sbjct: 136  TIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQQSGEVSMELADLEAFYR 195

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
            ESK  +DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+   
Sbjct: 196  ESKTLYDEDEEFAAKARNYVVKLQSGDAFCLEMWKKLVDVTMIQNQQNYDRLNVSLSRDN 255

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L++KG+ + DDG ++++ +   ++   PM ++  K DGGF Y 
Sbjct: 256  VMGESMYNDMLPGIVADLKEKGIAQEDDGAQVVFLDEYKNKDGEPMGVIIQKRDGGFLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PEHVSLEHHAFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D + FKTR+G TV+L++LLDE   R+   ++ KN   +LT  E +     VA   +KY
Sbjct: 375  GKDGRPFKTRAGGTVRLADLLDEAQVRAAALIEAKN--PDLTAEEKTSIATTVAMAAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ASI   AGI+ ++L     +  + 
Sbjct: 433  ADLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGISMDEL-----TGQII 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNC-YCIEKDAEG 1037
            +  EKE AL   LL+  + +  V R+   H +C YL++++  FS FY+ C   +  + E 
Sbjct: 488  IGEEKEKALIAKLLQFEEAVQAVAREGQPHIMCSYLFELAGQFSSFYEACPILVASNEES 547

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            K       RL LA  TAK +K+  D+L I T
Sbjct: 548  K-----QSRLKLAALTAKTIKQGLDLLGINT 573



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/334 (40%), Positives = 197/334 (58%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKQLG-----MNPREFAQKVIDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FLS  +  +Q +       + VN  +P T      ++VD+S+PN+AKEMHVGHLRS
Sbjct: 82  FINIFLSETFLAQQAELALADAHLGVNKAEPQT------IVVDYSAPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+         S  +ADL+AFY+
Sbjct: 136 TIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQQSGEVSMELADLEAFYR 195

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
           ESK  +DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+   
Sbjct: 196 ESKTLYDEDEEFAAKARNYVVKLQSGDAFCLEMWKKLVDVTMIQNQQNYDRLNVSLSRDN 255

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L++KG+ + DDG ++++ +   ++   PM ++  K DGGF Y 
Sbjct: 256 VMGESMYNDMLPGIVADLKEKGIAQEDDGAQVVFLDEYKNKDGEPMGVIIQKRDGGFLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  243 bits (620), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 196/333 (58%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----MNPREFAQKVIDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FLS  +  +Q +       + VN  +P T      ++VD+S+PN+AKEMHVGHLRS
Sbjct: 82   FINIFLSETFLAQQAELALADAHLGVNKAEPQT------IVVDYSAPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+         S  +ADL+AFY+
Sbjct: 136  TIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQQSGEVSMELADLEAFYR 195

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
            ESK  +DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+   
Sbjct: 196  ESKTLYDEDEEFAAKARNYVVKLQSGDAFCLEMWKKLVDVTMIQNQQNYDRLNVSLSRDN 255

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L++KG+ + DDG ++++ +   ++   PM ++  K DGGF Y 
Sbjct: 256  VMGESMYNDMLPGIVADLKEKGIAQEDDGAQVVFLDEYKNKDGEPMGVIIQKRDGGFLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|167625769|ref|YP_001676063.1| arginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083548|sp|B0TVV1.1|SYR_SHEHH RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|167355791|gb|ABZ78404.1| arginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 581

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 229/567 (40%), Positives = 333/567 (58%), Gaps = 43/567 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K        KNP +IAQ         L  N   +  ++K+E+A PGF+
Sbjct: 41   GDFATNLAMMLTK-----AAGKNPREIAQL--------LIDNLPESAHVEKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 630
            N F+       Q+  + +N    G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIG
Sbjct: 88   NFFIDDNALANQLM-VALNSDHLGLELPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIG 143

Query: 631  DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESK 689
            D++ R LE++GH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K
Sbjct: 144  DSVVRALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAKMELSDLENFYRAAK 203

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
             RFDE   F  RA + VV LQ  D    K W    D+S     ++Y+RL V+LT    RG
Sbjct: 204  VRFDESAEFATRARKLVVELQSGDEYCNKLWREFNDISLSHCHELYERLGVSLTRADVRG 263

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSD 801
            ES Y   + Q+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGG+ Y TSD
Sbjct: 264  ESAYNSDLAQVVADLDAQGLLSESNGAKVVFQDEFKNKEGEPLPVIIQKADGGYLYATSD 323

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAA+R R     AD  +Y  DL Q +HF+ + + AK A  +    +  + +GFG + GED
Sbjct: 324  LAAMRYRSNVLNADRALYFVDLRQALHFQQVFKLAKTAKFVREEMS-FEHMGFGTMNGED 382

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTRSG  VKL +LL E   R+LD ++ KN   ++   EL+E  + V    +KYADL
Sbjct: 383  GRPFKTRSGGVVKLIDLLKEADTRALDLVRSKN--PDMDEAELAEIARVVGIASVKYADL 440

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+FSF++ML   GNTA YLLYAYTR+A I + A    +D+ ++     + LEH
Sbjct: 441  SKNRASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA----QDVDLS--DATIILEH 494

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            EKE  L   L +  +V+  +      H LC YL++++ AFS FY+ C  +  + E   K+
Sbjct: 495  EKEKDLGTKLAQFGEVMTRMVGKGQPHALCGYLFELAGAFSSFYEACPVLAAETEESKKS 554

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RLLL++ TAK +K+  ++L + T
Sbjct: 555  ----RLLLSQLTAKTLKQGLNLLGLET 577



 Score =  227 bits (578), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 193/333 (57%), Gaps = 33/333 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K        KNP +IAQ         L  N   +  ++K+E+A PGF+
Sbjct: 41  GDFATNLAMMLTK-----AAGKNPREIAQL--------LIDNLPESAHVEKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           N F+       Q+  + +N    G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIG
Sbjct: 88  NFFIDDNALANQLM-VALNSDHLGLELPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIG 143

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESK 299
           D++ R LE++GH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K
Sbjct: 144 DSVVRALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAKMELSDLENFYRAAK 203

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
            RFDE   F  RA + VV LQ  D    K W    D+S     ++Y+RL V+LT    RG
Sbjct: 204 VRFDESAEFATRARKLVVELQSGDEYCNKLWREFNDISLSHCHELYERLGVSLTRADVRG 263

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSD 411
           ES Y   + Q+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGG+ Y TSD
Sbjct: 264 ESAYNSDLAQVVADLDAQGLLSESNGAKVVFQDEFKNKEGEPLPVIIQKADGGYLYATSD 323

Query: 412 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           LAA+R R     AD  +Y  D R    + QV +
Sbjct: 324 LAAMRYRSNVLNADRALYFVDLRQALHFQQVFK 356



 Score =  227 bits (578), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 193/333 (57%), Gaps = 33/333 (9%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K        KNP +IAQ         L  N   +  ++K+E+A PGF+
Sbjct: 41   GDFATNLAMMLTK-----AAGKNPREIAQL--------LIDNLPESAHVEKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            N F+       Q+  + +N    G++ PT      V+VD+SSPN+AKEMHVGHLRSTIIG
Sbjct: 88   NFFIDDNALANQLM-VALNSDHLGLELPTPQT---VVVDYSSPNLAKEMHVGHLRSTIIG 143

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESK 1316
            D++ R LE++GH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K
Sbjct: 144  DSVVRALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAKMELSDLENFYRAAK 203

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
             RFDE   F  RA + VV LQ  D    K W    D+S     ++Y+RL V+LT    RG
Sbjct: 204  VRFDESAEFATRARKLVVELQSGDEYCNKLWREFNDISLSHCHELYERLGVSLTRADVRG 263

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSD 1428
            ES Y   + Q+V  L+ +GLL   +G K+++ ++  +     +P+ I K+DGG+ Y TSD
Sbjct: 264  ESAYNSDLAQVVADLDAQGLLSESNGAKVVFQDEFKNKEGEPLPVIIQKADGGYLYATSD 323

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            LAA+R R     AD  +Y  D R    + QV +
Sbjct: 324  LAAMRYRSNVLNADRALYFVDLRQALHFQQVFK 356


>gi|419798481|ref|ZP_14323889.1| arginine--tRNA ligase [Neisseria sicca VK64]
 gi|385694542|gb|EIG25138.1| arginine--tRNA ligase [Neisseria sicca VK64]
          Length = 572

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/565 (41%), Positives = 321/565 (56%), Gaps = 47/565 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            N+ L   +  + I  + +N  +      +K   V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 83   NLRLRPEFLAQNIH-VALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDS 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RF
Sbjct: 142  ISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRF 199

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES 
Sbjct: 200  DEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESK 259

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   ++ +V  L +KGL   DDG K+++        GE    I   + K  GGF Y ++D
Sbjct: 260  YNDDLQPVVDDLVQKGLAVEDDGAKVVFLNEFKNKEGEPAAFI---VQKQGGGFLYASTD 316

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LA +R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D
Sbjct: 317  LACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDAKAEFIGFGTMMGKD 375

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADL
Sbjct: 376  GKPFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADL 433

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L  
Sbjct: 434  SKNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVLRKAGEWD-------ATAPTVLTE 486

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
              E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  + 
Sbjct: 487  PLEKQLAAELLKFEDVLQSVADTAYPHYLANYLYQIATLFSRFYEACPILK--AEGATR- 543

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNI 1066
                RL LA+ T   +K+  D+L I
Sbjct: 544  --NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  229 bits (585), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 157/420 (37%), Positives = 218/420 (51%), Gaps = 43/420 (10%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           N+ L   +  + I  + +N  +      +K   V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 83  NLRLRPEFLAQNIH-VALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDS 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RF
Sbjct: 142 ISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRF 199

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES 
Sbjct: 200 DEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESK 259

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   ++ +V  L +KGL   DDG K+++        GE    I   + K  GGF Y ++D
Sbjct: 260 YNDDLQPVVDDLVQKGLAVEDDGAKVVFLNEFKNKEGEPAAFI---VQKQGGGFLYASTD 316

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---N 468
           LA +R RI   KAD ++YV DHR      Q      K   +   + ++  G    M    
Sbjct: 317 LACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGKDG 376

Query: 469 VPVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            P + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 377 KPFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/323 (41%), Positives = 186/323 (57%), Gaps = 32/323 (9%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            N+ L   +  + I  + +N  +      +K   V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 83   NLRLRPEFLAQNIH-VALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDS 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RF
Sbjct: 142  ISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRF 199

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES 
Sbjct: 200  DEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESK 259

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   ++ +V  L +KGL   DDG K+++        GE    I   + K  GGF Y ++D
Sbjct: 260  YNDDLQPVVDDLVQKGLAVEDDGAKVVFLNEFKNKEGEPAAFI---VQKQGGGFLYASTD 316

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LA +R RI   KAD ++YV DHR
Sbjct: 317  LACLRYRIGRLKADRLLYVVDHR 339


>gi|401764215|ref|YP_006579222.1| arginyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
 gi|400175749|gb|AFP70598.1| arginyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
          Length = 577

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    +   + +   GV  P   +   V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVSRP---QAQTVVIDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDCVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I   D  V A +T V+
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANI---DENVLANAT-VT 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 488  ITEDREAQLAARLLQFEETLTVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              +V   RL LA+ TAK +K   D L I T
Sbjct: 546  --SVRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 187/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    +   + +   GV  P   +   V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLASHVDAALKSDRLGVSRP---QAQTVVIDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  226 bits (576), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 186/333 (55%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    +   + +   GV  P   +   V++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVSRP---QAQTVVIDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|221061383|ref|XP_002262261.1| arginyl-trna synthetase [Plasmodium knowlesi strain H]
 gi|193811411|emb|CAQ42139.1| arginyl-trna synthetase, putative [Plasmodium knowlesi strain H]
          Length = 588

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/603 (35%), Positives = 343/603 (56%), Gaps = 43/603 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            + +VF H++Q  FP + ++     +       KFG FQCN+A     IFK  G++ N  +
Sbjct: 8    IKEVFQHSIQKCFPSISEEVVVTYAN-----AKFGHFQCNNAF---NIFKKYGKELN-VE 58

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
             AQ ++ ++   ++ N       ++I+ +  GF+ V LS+ Y  + +  +  N     ++
Sbjct: 59   NAQKLSQLIIENISEN-----FFEEIKSSPQGFITVKLSKQYIEKSLLKLYKNNKIEISV 113

Query: 601  N----------KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
            N             RVLVDFSSPNIAKEMHVGHLRSTI+GD+I  + E+L    +R+NH+
Sbjct: 114  NIDEVKSGNDGDYKRVLVDFSSPNIAKEMHVGHLRSTILGDSICNIFEFLNVQTIRVNHI 173

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGM+I ++   +P++    P + +L + Y+E+KK +D D+ F+K +    + LQ
Sbjct: 174  GDWGTQFGMIINYIVTNYPNFKENMPELTNLTSLYQEAKKIYDVDKEFEKNSKNYAIKLQ 233

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              D D    W+ IC+ S+++F KIY  L++ L   GES Y   +   +  L+ + LL  +
Sbjct: 234  NNDEDSLFIWKKICESSKKEFNKIYKILDIKLDYVGESHYINMIPSTLKILKDQELLT-N 292

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
             G  I +  +   +P+ + KS+GG+ YD++D+AA+  R++E  AD ++YVTD GQ  HF 
Sbjct: 293  VGDAICYHSENFKVPLFLQKSNGGYGYDSTDVAALHYRLKELNADCVIYVTDNGQLSHFE 352

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS---- 886
             + E A++A   N  KT++  VGFG+VL  D KKFKTRSG T+KL  L++EG  R+    
Sbjct: 353  TIFEVARRAQWANE-KTKLIHVGFGLVLNADNKKFKTRSGTTIKLINLINEGTERAKKDL 411

Query: 887  LDK--LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
            L++  LK +   +     ++ +  + +    IKY D+  NRN DY FS+D ML+ +GNT 
Sbjct: 412  LERIQLKSEEEISYFEGVDIDKLSEELCVSAIKYFDIKQNRNTDYKFSYDNMLNVKGNTG 471

Query: 945  VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
            +Y++YAY+R+ SI R   I+ + L        ++L    E  L   +L+  DV   + ++
Sbjct: 472  LYIIYAYSRMCSIFRKCNIDMDQL----SKDELNLVSPYEVNLGLHILKFPDVFYFILKN 527

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            + +H L EY YD++T F+ FY+NC  I  + E         RL+L   +  +++ C  +L
Sbjct: 528  MLIHKLAEYTYDLTTIFTAFYENCKVINSENE-------KSRLILCAISKSLLQICLKLL 580

Query: 1065 NIR 1067
             ++
Sbjct: 581  GLK 583



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/353 (35%), Positives = 205/353 (58%), Gaps = 25/353 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           + +VF H++Q  FP + ++     +       KFG FQCN+A     IFK  G++ N  +
Sbjct: 8   IKEVFQHSIQKCFPSISEEVVVTYAN-----AKFGHFQCNNAF---NIFKKYGKELN-VE 58

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 210
            AQ ++ ++   ++ N       ++I+ +  GF+ V LS+ Y  + +  +  N     ++
Sbjct: 59  NAQKLSQLIIENISEN-----FFEEIKSSPQGFITVKLSKQYIEKSLLKLYKNNKIEISV 113

Query: 211 N----------KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
           N             RVLVDFSSPNIAKEMHVGHLRSTI+GD+I  + E+L    +R+NH+
Sbjct: 114 NIDEVKSGNDGDYKRVLVDFSSPNIAKEMHVGHLRSTILGDSICNIFEFLNVQTIRVNHI 173

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGM+I ++   +P++    P + +L + Y+E+KK +D D+ F+K +    + LQ
Sbjct: 174 GDWGTQFGMIINYIVTNYPNFKENMPELTNLTSLYQEAKKIYDVDKEFEKNSKNYAIKLQ 233

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             D D    W+ IC+ S+++F KIY  L++ L   GES Y   +   +  L+ + LL  +
Sbjct: 234 NNDEDSLFIWKKICESSKKEFNKIYKILDIKLDYVGESHYINMIPSTLKILKDQELLT-N 292

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            G  I +  +   +P+ + KS+GG+ YD++D+AA+  R++E  AD ++YVTD+
Sbjct: 293 VGDAICYHSENFKVPLFLQKSNGGYGYDSTDVAALHYRLKELNADCVIYVTDN 345



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/353 (35%), Positives = 205/353 (58%), Gaps = 25/353 (7%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            + +VF H++Q  FP + ++     +       KFG FQCN+A     IFK  G++ N  +
Sbjct: 8    IKEVFQHSIQKCFPSISEEVVVTYAN-----AKFGHFQCNNAF---NIFKKYGKELN-VE 58

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
             AQ ++ ++   ++ N       ++I+ +  GF+ V LS+ Y  + +  +  N     ++
Sbjct: 59   NAQKLSQLIIENISEN-----FFEEIKSSPQGFITVKLSKQYIEKSLLKLYKNNKIEISV 113

Query: 1228 N----------KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
            N             RVLVDFSSPNIAKEMHVGHLRSTI+GD+I  + E+L    +R+NH+
Sbjct: 114  NIDEVKSGNDGDYKRVLVDFSSPNIAKEMHVGHLRSTILGDSICNIFEFLNVQTIRVNHI 173

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGM+I ++   +P++    P + +L + Y+E+KK +D D+ F+K +    + LQ
Sbjct: 174  GDWGTQFGMIINYIVTNYPNFKENMPELTNLTSLYQEAKKIYDVDKEFEKNSKNYAIKLQ 233

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              D D    W+ IC+ S+++F KIY  L++ L   GES Y   +   +  L+ + LL  +
Sbjct: 234  NNDEDSLFIWKKICESSKKEFNKIYKILDIKLDYVGESHYINMIPSTLKILKDQELLT-N 292

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             G  I +  +   +P+ + KS+GG+ YD++D+AA+  R++E  AD ++YVTD+
Sbjct: 293  VGDAICYHSENFKVPLFLQKSNGGYGYDSTDVAALHYRLKELNADCVIYVTDN 345


>gi|308187218|ref|YP_003931349.1| arginyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057728|gb|ADO09900.1| Arginyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 576

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/567 (38%), Positives = 330/567 (58%), Gaps = 40/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  +  ++ +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDHNWLAKHAREALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHIRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     G
Sbjct: 198  RTYDEDPEFAERARGYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNDMLPGIVADLKQKGLAVESEGATVVYLDEFQNKEGEPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E  KAD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLKADRVLYYIDSRQHQHLVQAWTIVRKAGYV-PESVPLEHHAFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTRSG T+KLS+LLDE  +R+   +++KN   E++  E+    + +    +KYADL
Sbjct: 377  GRPFKTRSGGTIKLSDLLDEAWQRAYTLVREKN--PEMSEAEVKALAEVMGISAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI+++ L        + +  
Sbjct: 435  SKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDADSL-----DAEIVISE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            E+E  LA  LL+  +V+  V RD   H +C YLYD++  FS FY++C  +  +++     
Sbjct: 490  EREAQLATRLLQFEEVITQVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAESDA---- 545

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA  TAK +K+  D L I T
Sbjct: 546  TRLSRLQLAALTAKTLKQGLDTLGIDT 572



 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 197/331 (59%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  +  ++ +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDHNWLAKHAREALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHIRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     G
Sbjct: 198 RTYDEDPEFAERARGYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNDMLPGIVADLKQKGLAVESEGATVVYLDEFQNKEGEPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E  KAD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLKADRVLYYIDSRQHQHLVQA 348



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/330 (38%), Positives = 196/330 (59%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAEAVIQ--------HLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  +  ++ +     GVQ   L +   ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDHNWLAKHAREALSLPRLGVQ---LAEPQTIVVDYSAPNVAKEMHVGHIRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +DED  F +RA   VV LQ  D   ++ W+ + D++    QKIYDR+NVTLT     G
Sbjct: 198  RTYDEDPEFAERARGYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNVTLTRNDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L++KGL    +G  +++    +++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNDMLPGIVADLKQKGLAVESEGATVVYLDEFQNKEGEPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E  KAD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLKADRVLYYIDSRQHQHLVQ 347


>gi|226329867|ref|ZP_03805385.1| hypothetical protein PROPEN_03780 [Proteus penneri ATCC 35198]
 gi|225200662|gb|EEG83016.1| arginine--tRNA ligase [Proteus penneri ATCC 35198]
          Length = 535

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/518 (40%), Positives = 313/518 (60%), Gaps = 21/518 (4%)

Query: 559  LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 618
            +  + DK+E+A PGF+N+FLS  +  +Q +D +V+     T  +   +++D+SSPN+AK+
Sbjct: 27   ITDIADKVEIAGPGFINIFLSPQWVAKQAEDALVDEHLNVTPVEPQTIVIDYSSPNVAKQ 86

Query: 619  MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 678
            MHVGHLRSTIIGD  +R L +LGH+VVR NH+GDWGTQFGMLIA+L+ K  +       +
Sbjct: 87   MHVGHLRSTIIGDASARTLSFLGHNVVRANHLGDWGTQFGMLIAYLEKKQNEN-AADMAL 145

Query: 679  ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 738
            +DL+ FY+E+KK +DEDE+F +RA   VV LQ  D   +  W  + D++ +  Q  Y RL
Sbjct: 146  SDLEEFYREAKKHYDEDEVFAERARNYVVKLQSGDEYCRTMWRKLVDITMQQNQATYQRL 205

Query: 739  NVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--K 790
            NVTLTE    GES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K
Sbjct: 206  NVTLTEDDIMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVIVQK 265

Query: 791  SDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMD 850
             DGG+ Y T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++
Sbjct: 266  KDGGYLYTTTDIACAKYRHETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYI-PDSMSLE 324

Query: 851  FVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQA 910
               FG++LG+D + FKTRSG T++L++LLDE   R+   + +KN   ++   EL+   + 
Sbjct: 325  HHMFGMMLGKDGRPFKTRSGGTIRLTDLLDEAQERARALIAEKN--PDMDKDELNNVARV 382

Query: 911  VAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRV 970
            V  G +KYADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ASI + A I+   L  
Sbjct: 383  VGIGAVKYADLSKNRTTDYIFDWDLMLSFEGNTAPYMQYAYTRVASIFKRADIDENAL-- 440

Query: 971  AAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYC 1030
               + P+ L    E  LA  L++ ++ +M V+R+   H +C YLYD++ AFS FY+NC  
Sbjct: 441  ---TQPIVLTQSHERQLALRLVQFDETIMQVSREGTPHVMCAYLYDLAQAFSGFYENCPI 497

Query: 1031 IEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +  + E   ++    RL LA  TAK +K+  D L I T
Sbjct: 498  LSAEDENTRQS----RLKLARLTAKTLKQGLDTLGIET 531



 Score =  230 bits (586), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 119/282 (42%), Positives = 178/282 (63%), Gaps = 9/282 (3%)

Query: 169 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 228
           +  + DK+E+A PGF+N+FLS  +  +Q +D +V+     T  +   +++D+SSPN+AK+
Sbjct: 27  ITDIADKVEIAGPGFINIFLSPQWVAKQAEDALVDEHLNVTPVEPQTIVIDYSSPNVAKQ 86

Query: 229 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 288
           MHVGHLRSTIIGD  +R L +LGH+VVR NH+GDWGTQFGMLIA+L+ K  +       +
Sbjct: 87  MHVGHLRSTIIGDASARTLSFLGHNVVRANHLGDWGTQFGMLIAYLEKKQNEN-AADMAL 145

Query: 289 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 348
           +DL+ FY+E+KK +DEDE+F +RA   VV LQ  D   +  W  + D++ +  Q  Y RL
Sbjct: 146 SDLEEFYREAKKHYDEDEVFAERARNYVVKLQSGDEYCRTMWRKLVDITMQQNQATYQRL 205

Query: 349 NVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--K 400
           NVTLTE    GES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K
Sbjct: 206 NVTLTEDDIMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVIVQK 265

Query: 401 SDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 266 KDGGYLYTTTDIACAKYRHETLHADRVLYYIDSRQHQHLMQA 307



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/281 (41%), Positives = 177/281 (62%), Gaps = 9/281 (3%)

Query: 1186 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 1245
            +  + DK+E+A PGF+N+FLS  +  +Q +D +V+     T  +   +++D+SSPN+AK+
Sbjct: 27   ITDIADKVEIAGPGFINIFLSPQWVAKQAEDALVDEHLNVTPVEPQTIVIDYSSPNVAKQ 86

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRSTIIGD  +R L +LGH+VVR NH+GDWGTQFGMLIA+L+ K  +       +
Sbjct: 87   MHVGHLRSTIIGDASARTLSFLGHNVVRANHLGDWGTQFGMLIAYLEKKQNEN-AADMAL 145

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
            +DL+ FY+E+KK +DEDE+F +RA   VV LQ  D   +  W  + D++ +  Q  Y RL
Sbjct: 146  SDLEEFYREAKKHYDEDEVFAERARNYVVKLQSGDEYCRTMWRKLVDITMQQNQATYQRL 205

Query: 1366 NVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--K 1417
            NVTLTE    GES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K
Sbjct: 206  NVTLTEDDIMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVIVQK 265

Query: 1418 SDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             DGG+ Y T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 266  KDGGYLYTTTDIACAKYRHETLHADRVLYYIDSRQHQHLMQ 306


>gi|261365442|ref|ZP_05978325.1| arginine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566109|gb|EFC87669.1| arginine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 572

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 321/563 (57%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHTALNDTRFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++      +D       + K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDAKAEFIGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +  V A   P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAG----EWDVTA---PTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY  +T FS FY+ C  ++  +EG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEACPILK--SEGATR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 157/418 (37%), Positives = 217/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIHTALNDTRFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++      +D       + K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +   + ++  G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 185/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHTALNDTRFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++      +D       + K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|375264813|ref|YP_005022256.1| arginyl-tRNA synthetase [Vibrio sp. EJY3]
 gi|369840137|gb|AEX21281.1| arginyl-tRNA synthetase [Vibrio sp. EJY3]
          Length = 577

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 224/564 (39%), Positives = 323/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADSRLGVAEEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTREDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  A+ ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGANRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  +DL+   Q T      EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDDLQGDIQVT-----DEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  243 bits (621), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 194/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADAALADSRLGVAEEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTREDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  A+ ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELGANRVLYFIDSRQHQHLMQA 349



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 193/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADSRLGVAEEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTREDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  A+ ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGANRVLYFIDSRQHQHLMQ 348


>gi|417825323|ref|ZP_12471911.1| arginyl-tRNA synthetase [Vibrio cholerae HE48]
 gi|340046808|gb|EGR07738.1| arginyl-tRNA synthetase [Vibrio cholerae HE48]
          Length = 577

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 232/608 (38%), Positives = 342/608 (56%), Gaps = 49/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  ++D  + A++ A    G    ++A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQALINDRVSQAIEAA----GAPAGTLALVRQSAKAQFGDYQANGIMGAAKQLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK----DI 590
              NP + AQ +  V+        +L  +  K E+A PGF+N+FLS  +   Q +    D+
Sbjct: 53   -TNPREFAQKVLDVL--------NLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADV 103

Query: 591  IVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             +   Q  P T      ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R N
Sbjct: 104  RLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            H+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +DEDE F + A   VV 
Sbjct: 158  HIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDEDEQFAETARNYVVK 217

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES Y   + Q+V  L+ KG
Sbjct: 218  LQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKG 277

Query: 766  LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A  + R E   AD ++Y 
Sbjct: 278  LAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYF 337

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P    ++   FG++LG+D + FKTR+G TV+L++LLD
Sbjct: 338  IDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRPFKTRAGGTVRLADLLD 396

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   ++ KN   EL+  E +     VA   +KYADLS +R  DYVF +D ML   
Sbjct: 397  EAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFE 454

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE AL   LL+  + +  
Sbjct: 455  GNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKEKALIAKLLQFEEAVQS 509

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V R+   H +C YL++++  FS FY+ C  +  + E    ++   RL LA  TAK +K+ 
Sbjct: 510  VAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQSRLKLAALTAKTIKQG 565

Query: 1061 FDILNIRT 1068
              +L I T
Sbjct: 566  LALLGIDT 573



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/372 (38%), Positives = 212/372 (56%), Gaps = 37/372 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  ++D  + A++ A    G    ++A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQALINDRVSQAIEAA----GAPAGTLALVRQSAKAQFGDYQANGIMGAAKQLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK----DI 200
             NP + AQ +  V+        +L  +  K E+A PGF+N+FLS  +   Q +    D+
Sbjct: 53  -TNPREFAQKVLDVL--------NLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADV 103

Query: 201 IVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +   Q  P T      ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R N
Sbjct: 104 RLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           H+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +DEDE F + A   VV 
Sbjct: 158 HIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDEDEQFAETARNYVVK 217

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES Y   + Q+V  L+ KG
Sbjct: 218 LQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKG 277

Query: 376 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A  + R E   AD ++Y 
Sbjct: 278 LAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYF 337

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 338 IDSRQHQHLMQA 349



 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 144/371 (38%), Positives = 211/371 (56%), Gaps = 37/371 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  ++D  + A++ A    G    ++A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQALINDRVSQAIEAA----GAPAGTLALVRQSAKAQFGDYQANGIMGAAKQLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK----DI 1217
              NP + AQ +  V+        +L  +  K E+A PGF+N+FLS  +   Q +    D+
Sbjct: 53   -TNPREFAQKVLDVL--------NLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADV 103

Query: 1218 IVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             +   Q  P T      ++ D+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R N
Sbjct: 104  RLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            H+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +DEDE F + A   VV 
Sbjct: 158  HIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDEDEQFAETARNYVVK 217

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES Y   + Q+V  L+ KG
Sbjct: 218  LQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKG 277

Query: 1393 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A  + R E   AD ++Y 
Sbjct: 278  LAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYF 337

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 338  IDSRQHQHLMQ 348


>gi|294139047|ref|YP_003555025.1| arginyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293325516|dbj|BAJ00247.1| arginyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 581

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 223/563 (39%), Positives = 333/563 (59%), Gaps = 35/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K       +KNP +IAQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41   GDFATNLAMMLTKT-----ARKNPREIAQ----LIIDSLPQDSQVAKV----EIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F+       Q+   + +     +L ++  ++VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDENALANQLMAALKDDHLGISLPEQQTIVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 693
            R LE+ GH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148  RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAQMELSDLETFYRAAKVRFD 207

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E E F  RA + VV+LQ  D    K W    D+S      +Y RL V+LT    RGES Y
Sbjct: 208  ESEEFAVRARKLVVSLQSGDEYCNKLWREFNDISLNHCHDVYARLGVSLTREDVRGESAY 267

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 805
               + ++V  L+ +GLL   +G K+++      ++   +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268  NADLVEVVKELDTQGLLSESNGAKVVFQDEFKNKEGDPLPVIIQKADGGYLYATSDMAAM 327

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
              R +   AD ++Y  DL Q +HF+ + + A+KA  + P +  ++ +GFG + G D + F
Sbjct: 328  SYRSKVLNADRVLYFVDLRQALHFQQVFKLARKANFVRP-ELSLEHMGFGTMNGADGRPF 386

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSG  VKL +LL E   R+L+ ++ KN   ++   EL +  + V    +KYADLS NR
Sbjct: 387  KTRSGGVVKLVDLLAEADIRALELVRSKN--PDMDEAELEKIAKVVGISSVKYADLSKNR 444

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY+FSF++ML   GNTA YLLYAYTR+  I + A    ED+ ++     + LEH+KE 
Sbjct: 445  TSDYIFSFEQMLSFEGNTAPYLLYAYTRVIGIFKRA----EDIDLS--QAKILLEHDKEK 498

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             L   L +  +VL  +      H +C YL++++ AFS FY+ C  +  + E + K+    
Sbjct: 499  NLGNKLAQFGEVLSRMVSKGQPHAMCAYLFELAGAFSSFYEACPVLAAETEEQKKS---- 554

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RLL+A+ TAK +K+  D+L I T
Sbjct: 555  RLLIAKLTAKTLKQGLDLLGIET 577



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/329 (39%), Positives = 192/329 (58%), Gaps = 25/329 (7%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K       +KNP +IAQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41  GDFATNLAMMLTKT-----ARKNPREIAQ----LIIDSLPQDSQVAKV----EIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F+       Q+   + +     +L ++  ++VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88  NFFIDENALANQLMAALKDDHLGISLPEQQTIVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 303
           R LE+ GH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148 RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAQMELSDLETFYRAAKVRFD 207

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E E F  RA + VV+LQ  D    K W    D+S      +Y RL V+LT    RGES Y
Sbjct: 208 ESEEFAVRARKLVVSLQSGDEYCNKLWREFNDISLNHCHDVYARLGVSLTREDVRGESAY 267

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 415
              + ++V  L+ +GLL   +G K+++      ++   +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268 NADLVEVVKELDTQGLLSESNGAKVVFQDEFKNKEGDPLPVIIQKADGGYLYATSDMAAM 327

Query: 416 RQRIEEEKADWIVYVTDHRS---YHQVLQ 441
             R +   AD ++Y  D R    + QV +
Sbjct: 328 SYRSKVLNADRVLYFVDLRQALHFQQVFK 356



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/329 (39%), Positives = 192/329 (58%), Gaps = 25/329 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K       +KNP +IAQ    ++   L  +  +AKV    E+A PGF+
Sbjct: 41   GDFATNLAMMLTKT-----ARKNPREIAQ----LIIDSLPQDSQVAKV----EIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F+       Q+   + +     +L ++  ++VD+SSPN+AKEMHVGHLRSTIIGD++ 
Sbjct: 88   NFFIDENALANQLMAALKDDHLGISLPEQQTIVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 1320
            R LE+ GH V+R NHVGDWGTQFGML+A++++ +  +       ++DL+ FY+ +K RFD
Sbjct: 148  RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAQMELSDLETFYRAAKVRFD 207

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E E F  RA + VV+LQ  D    K W    D+S      +Y RL V+LT    RGES Y
Sbjct: 208  ESEEFAVRARKLVVSLQSGDEYCNKLWREFNDISLNHCHDVYARLGVSLTREDVRGESAY 267

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 1432
               + ++V  L+ +GLL   +G K+++      ++   +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268  NADLVEVVKELDTQGLLSESNGAKVVFQDEFKNKEGDPLPVIIQKADGGYLYATSDMAAM 327

Query: 1433 RQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
              R +   AD ++Y  D R    + QV +
Sbjct: 328  SYRSKVLNADRVLYFVDLRQALHFQQVFK 356


>gi|260901277|ref|ZP_05909672.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308109838|gb|EFO47378.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 577

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 322/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  ++L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDELQ-----GDIQITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQA 349



 Score =  244 bits (622), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|418294078|ref|ZP_12905979.1| arginyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
            16156]
 gi|379065462|gb|EHY78205.1| arginyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
            16156]
          Length = 579

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/599 (39%), Positives = 339/599 (56%), Gaps = 53/599 (8%)

Query: 481  LSDVFTHAVQVA---------FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQAVVRLTAEGVLPEGLTPAIQVENTKDK---SHGDFASNIAMMLAK---P 54

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
             G K  P D+A+ +       +A  P  A+V  K+E+A PGF+N F +     E+++  +
Sbjct: 55   AGMK--PRDLAEKL-------IAALPQDAQV-SKVEIAGPGFLNFFQNSEALAERLEIAL 104

Query: 592  VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             +    V+  T  +  RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG  V+R N
Sbjct: 105  ADPLLAVRKATATQ--RVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEHLGDKVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+L++K          ++DL+ FY+ +K+RFDE   F  RA + VV 
Sbjct: 163  HVGDWGTQFGMLLAYLEEKPA---AAESELSDLEQFYRAAKQRFDESAQFADRARELVVK 219

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D      W    D+S    QK+YDRLNV LT    +GES Y   +  +V  L  KG
Sbjct: 220  LQAGDAQCLSLWTRFNDISLAHCQKLYDRLNVKLTPADVKGESAYNADLAYIVEALRSKG 279

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            LL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD ++Y 
Sbjct: 280  LLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADRVLYF 339

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF++  E A++AG ++    +++ +GFG + G D + FKTR G TVKL +LLD
Sbjct: 340  VDQRQALHFQMAFEVARRAGFVHEG-MQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLD 398

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E  +R+   +KDKN   +L   EL +  QAV    +KYADLS +R  DY F+F+ ML   
Sbjct: 399  EAEQRAYTLVKDKN--PDLDEVELRQIAQAVGISAVKYADLSKHRTSDYRFNFELMLSFE 456

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+AS+ R  G   E++     S  + LE E+E ALA  L +  +VL  
Sbjct: 457  GNTAPYLLYAYTRVASVFRKLGKRIEEI-----SGHIQLEAEQELALAAKLAQFGEVLNS 511

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V      H LC YLYD++  FS FY++C  +  + E + ++    RL LA  T K +K+
Sbjct: 512  VGEKGEPHLLCAYLYDLAGLFSSFYEHCPILSAEQEEQKQS----RLRLAALTGKTLKQ 566



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 200/364 (54%), Gaps = 41/364 (11%)

Query: 91  LSDVFTHAVQVA---------FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1   MKDSIRHLIQQAVVRLTAEGVLPEGLTPAIQVENTKDK---SHGDFASNIAMMLAK---P 54

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
            G K  P D+A+ +       +A  P  A+V  K+E+A PGF+N F +     E+++  +
Sbjct: 55  AGMK--PRDLAEKL-------IAALPQDAQV-SKVEIAGPGFLNFFQNSEALAERLEIAL 104

Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +    V+  T  +  RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG  V+R N
Sbjct: 105 ADPLLAVRKATATQ--RVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEHLGDKVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+L++K          ++DL+ FY+ +K+RFDE   F  RA + VV 
Sbjct: 163 HVGDWGTQFGMLLAYLEEKPA---AAESELSDLEQFYRAAKQRFDESAQFADRARELVVK 219

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D      W    D+S    QK+YDRLNV LT    +GES Y   +  +V  L  KG
Sbjct: 220 LQAGDAQCLSLWTRFNDISLAHCQKLYDRLNVKLTPADVKGESAYNADLAYIVEALRSKG 279

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           LL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD ++Y 
Sbjct: 280 LLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADRVLYF 339

Query: 431 TDHR 434
            D R
Sbjct: 340 VDQR 343



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 200/364 (54%), Gaps = 41/364 (11%)

Query: 1108 LSDVFTHAVQVA---------FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQAVVRLTAEGVLPEGLTPAIQVENTKDK---SHGDFASNIAMMLAK---P 54

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
             G K  P D+A+ +       +A  P  A+V  K+E+A PGF+N F +     E+++  +
Sbjct: 55   AGMK--PRDLAEKL-------IAALPQDAQV-SKVEIAGPGFLNFFQNSEALAERLEIAL 104

Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             +    V+  T  +  RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG  V+R N
Sbjct: 105  ADPLLAVRKATATQ--RVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEHLGDKVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+L++K          ++DL+ FY+ +K+RFDE   F  RA + VV 
Sbjct: 163  HVGDWGTQFGMLLAYLEEKPA---AAESELSDLEQFYRAAKQRFDESAQFADRARELVVK 219

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D      W    D+S    QK+YDRLNV LT    +GES Y   +  +V  L  KG
Sbjct: 220  LQAGDAQCLSLWTRFNDISLAHCQKLYDRLNVKLTPADVKGESAYNADLAYIVEALRSKG 279

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            LL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD ++Y 
Sbjct: 280  LLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADRVLYF 339

Query: 1448 TDHR 1451
             D R
Sbjct: 340  VDQR 343


>gi|226939931|ref|YP_002795004.1| arginyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782968|sp|C1D5W4.1|SYR_LARHH RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|226714857|gb|ACO73995.1| Syr [Laribacter hongkongensis HLHK9]
          Length = 573

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 232/565 (41%), Positives = 323/565 (57%), Gaps = 42/565 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGDFQ N  MA  K       K NP ++AQ +   +         LA +  KIE+A PG
Sbjct: 34   EFGDFQANGVMAAAK-----QRKMNPRELAQQVIDKL--------DLAGIASKIEIAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L+  +  +++  ++ +   GV+  ++ +  RV+V++SSPN+AKEMHVGHLRSTII
Sbjct: 81   FINITLAPDFLAKRLDTVLDDARLGVR--SVTEPQRVMVEYSSPNLAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GDT++R++E+LG+++VR NHVGDWGTQFGML A+L +           ++DL+ FY+ +K
Sbjct: 139  GDTLARVVEFLGNNMVRGNHVGDWGTQFGMLTAYLVET-RQAGKADLELSDLETFYRNAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
             RFDED +F   A   VV LQ  D D  K WE   DVS    + +Y +L V LT    RG
Sbjct: 198  IRFDEDPVFADTARNYVVRLQGGDADVLKLWEQFVDVSLAHCEAVYRKLGVGLTRADVRG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L  K LL  DDG K+++ +   +    PM ++  K DGGF Y T+D
Sbjct: 258  ESAYNDDLPVIVDELAAKNLLSEDDGAKVVYLDEFRNHDGDPMGVIVQKKDGGFLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            L A+R R +E   D ++YV D  Q  HF+ +    +KAG   P    ++ VGFG ++G+D
Sbjct: 318  LGAVRYRHKELNLDRVIYVVDARQSQHFQQMFTICRKAG-FAPEAMSLEHVGFGTMMGDD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTRSG TVKL ELLDE   R+   + +KN   +L   E  +   AV  G +KYADL
Sbjct: 377  GKPFKTRSGGTVKLIELLDEAEERAYALVSEKN--PDLPEEEKRKIAHAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NRN DY+F++D ML   GNTA YL YAYTR+ASI R   ++  D      S P+ +  
Sbjct: 435  SKNRNSDYIFNWDLMLAFEGNTAPYLQYAYTRVASIFRK--VDRFD-----ASAPLLITE 487

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
              E  LA  L + +DVL  V R    H L +YLY ++T F  FY+ C  ++ +       
Sbjct: 488  PAEKQLALMLAQFSDVLNEVARTCFPHLLTQYLYQVATQFMRFYEACPILKSEG-----A 542

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNI 1066
                RL LA  TA  +K    +L I
Sbjct: 543  TQASRLKLARITADTLKTGLGLLGI 567



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/347 (40%), Positives = 202/347 (58%), Gaps = 28/347 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGDFQ N  MA  K       K NP ++AQ +   +         LA +  KIE+A PG
Sbjct: 34  EFGDFQANGVMAAAK-----QRKMNPRELAQQVIDKL--------DLAGIASKIEIAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L+  +  +++  ++ +   GV+  ++ +  RV+V++SSPN+AKEMHVGHLRSTII
Sbjct: 81  FINITLAPDFLAKRLDTVLDDARLGVR--SVTEPQRVMVEYSSPNLAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GDT++R++E+LG+++VR NHVGDWGTQFGML A+L +           ++DL+ FY+ +K
Sbjct: 139 GDTLARVVEFLGNNMVRGNHVGDWGTQFGMLTAYLVET-RQAGKADLELSDLETFYRNAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
            RFDED +F   A   VV LQ  D D  K WE   DVS    + +Y +L V LT    RG
Sbjct: 198 IRFDEDPVFADTARNYVVRLQGGDADVLKLWEQFVDVSLAHCEAVYRKLGVGLTRADVRG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L  K LL  DDG K+++ +   +    PM ++  K DGGF Y T+D
Sbjct: 258 ESAYNDDLPVIVDELAAKNLLSEDDGAKVVYLDEFRNHDGDPMGVIVQKKDGGFLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSS 458
           L A+R R +E   D ++YV D R   Q  Q +    +K G +  + S
Sbjct: 318 LGAVRYRHKELNLDRVIYVVDARQ-SQHFQQMFTICRKAGFAPEAMS 363



 Score =  234 bits (596), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 194/330 (58%), Gaps = 27/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGDFQ N  MA  K       K NP ++AQ +   +         LA +  KIE+A PG
Sbjct: 34   EFGDFQANGVMAAAK-----QRKMNPRELAQQVIDKL--------DLAGIASKIEIAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L+  +  +++  ++ +   GV+  ++ +  RV+V++SSPN+AKEMHVGHLRSTII
Sbjct: 81   FINITLAPDFLAKRLDTVLDDARLGVR--SVTEPQRVMVEYSSPNLAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GDT++R++E+LG+++VR NHVGDWGTQFGML A+L +           ++DL+ FY+ +K
Sbjct: 139  GDTLARVVEFLGNNMVRGNHVGDWGTQFGMLTAYLVET-RQAGKADLELSDLETFYRNAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
             RFDED +F   A   VV LQ  D D  K WE   DVS    + +Y +L V LT    RG
Sbjct: 198  IRFDEDPVFADTARNYVVRLQGGDADVLKLWEQFVDVSLAHCEAVYRKLGVGLTRADVRG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L  K LL  DDG K+++ +   +    PM ++  K DGGF Y T+D
Sbjct: 258  ESAYNDDLPVIVDELAAKNLLSEDDGAKVVYLDEFRNHDGDPMGVIVQKKDGGFLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            L A+R R +E   D ++YV D R      Q
Sbjct: 318  LGAVRYRHKELNLDRVIYVVDARQSQHFQQ 347


>gi|261252368|ref|ZP_05944941.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|417954023|ref|ZP_12597063.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|260935759|gb|EEX91748.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|342816063|gb|EGU50968.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
          Length = 577

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 223/564 (39%), Positives = 324/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLEGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +     T  ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADARLGVTAEEQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVRARNYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L+++GL + DDG ++++ E     D  ++ + I K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKQQGLAQEDDGAQVVFLEEYKNKDGEAMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PEEVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN    L   E S     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERATKLIESKN--PSLDAEEKSNIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR++SI   AGI+ ++L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVSSIFAKAGISMDNL-----AGEIKVTEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILNTEDE----SVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 194/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLEGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +     T  ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADAALADARLGVTAEEQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVRARNYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L+++GL + DDG ++++ E     D  ++ + I K DGGF Y T+D+A 
Sbjct: 262 YNDMLPGIVADLKQQGLAQEDDGAQVVFLEEYKNKDGEAMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/327 (40%), Positives = 193/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLEGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +     T  ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADARLGVTAEEQKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  RA   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVRARNYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L+++GL + DDG ++++ E     D  ++ + I K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKQQGLAQEDDGAQVVFLEEYKNKDGEAMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|212711950|ref|ZP_03320078.1| hypothetical protein PROVALCAL_03025 [Providencia alcalifaciens DSM
            30120]
 gi|212685472|gb|EEB45000.1| hypothetical protein PROVALCAL_03025 [Providencia alcalifaciens DSM
            30120]
          Length = 576

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 230/605 (38%), Positives = 334/605 (55%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMLAA----GAPEGCDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ I S +         L  +  K+E+A PGF+N+F+   +     +  + + 
Sbjct: 53   -MPPRQLAEQIVSQL--------DLEGIASKVEIAGPGFINIFIDPTWIAAHAEKALTSD 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGLAPV---KAETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDASDMALADLEEFYREAKKHYDEDEDFAVRARGYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TV+LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMALEHHMFGMMLGKDGKPFKTRSGGTVRLSDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +++KN   ++   EL      V  G +KYADLS NR  DY+F +D ML   GNT
Sbjct: 399  ERAQTLIREKN--PDMAEDELLNLANVVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+ASI + A I   DL     + P+ LE   E ALA  L++  + ++ V R
Sbjct: 457  APYMQYAYTRVASIFKKADITESDL-----TLPIVLEAPHEMALATRLMQFEETILTVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H +C YLYD++  FS FY++C  +  D + + ++    RL LA  T K +K   D 
Sbjct: 512  EGTPHVMCAYLYDLAGLFSSFYEHCPILSADTDAQRQS----RLKLALLTQKTLKVGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIET 572



 Score =  227 bits (578), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/369 (36%), Positives = 202/369 (54%), Gaps = 32/369 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAILSDKISAAMLAA----GAPEGCDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ I S +         L  +  K+E+A PGF+N+F+   +     +  + + 
Sbjct: 53  -MPPRQLAEQIVSQL--------DLEGIASKVEIAGPGFINIFIDPTWIAAHAEKALTSD 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104 RLGLAPV---KAETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KVQNEDASDMALADLEEFYREAKKHYDEDEDFAVRARGYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280 ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 434 RSYHQVLQA 442
           R +  ++QA
Sbjct: 340 RQHQHLMQA 348



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 201/368 (54%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMLAA----GAPEGCDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ I S +         L  +  K+E+A PGF+N+F+   +     +  + + 
Sbjct: 53   -MPPRQLAEQIVSQL--------DLEGIASKVEIAGPGFINIFIDPTWIAAHAEKALTSD 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    K   +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGLAPV---KAETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDASDMALADLEEFYREAKKHYDEDEDFAVRARGYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|261400736|ref|ZP_05986861.1| arginine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209505|gb|EEZ75960.1| arginine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 572

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 235/563 (41%), Positives = 321/563 (57%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPKTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDAKAEFIGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++ ++  +     
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILKAESASR----- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  230 bits (586), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 158/418 (37%), Positives = 219/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPKTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +   + ++  G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPKTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|375130343|ref|YP_004992443.1| arginyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
 gi|315179517|gb|ADT86431.1| arginyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 577

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 326/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVIDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +         +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADERLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DED  F +RA   VV LQ  D      W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDAEFAERARNYVVKLQGGDAFCLDMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKEKGLAQEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PEEVTLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   +L   E ++    VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAKALIESKN--PDLGADEKADIATTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVSPDNL-----TGDIKITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V+R+   H LC YL++++  FS FY+ C  +  + E    +V  
Sbjct: 494  KALIAKLLQFEEAVQSVSREGQPHILCSYLFELAGQFSSFYEACPILIAEDE----SVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I+T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIKT 573



 Score =  243 bits (619), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 149/414 (35%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKQLG-----TNPREFAQKVIDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +         +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADAALADERLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DED  F +RA   VV LQ  D      W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDAEFAERARNYVVKLQGGDAFCLDMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPGIVADLKEKGLAQEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTA---KKMNVPV 471
            + R E   AD ++Y  D R +  ++QA     K   +    + +         K   P 
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLGKDGRPF 381

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPELG-DKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   P+LG D+ A +A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAEERAKALIESKNPDLGADEKADIATTVAMAAVKYADL 435



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 191/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVIDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +         +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADERLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DED  F +RA   VV LQ  D      W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDAEFAERARNYVVKLQGGDAFCLDMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL + DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPGIVADLKEKGLAQEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|417948693|ref|ZP_12591836.1| arginyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
 gi|342809304|gb|EGU44425.1| arginyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
          Length = 577

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 320/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDEAFLAKQADAALADSRLGVAAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+++GL + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLPGIVADLKEQGLAKEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELAENEKKAIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++ + L        + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVSMDSLE-----GEIKITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 194/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FLNIFLDEAFLAKQADAALADSRLGVAAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+++GL + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNHMLPGIVADLKEQGLAKEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRFEELGADRVLYFIDSRQHQHLMQA 349



 Score =  243 bits (619), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 193/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDEAFLAKQADAALADSRLGVAAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+++GL + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLPGIVADLKEQGLAKEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQ 348


>gi|296314056|ref|ZP_06863997.1| arginine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839307|gb|EFH23245.1| arginine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 572

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 236/561 (42%), Positives = 320/561 (57%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A V    LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEV----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +    I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L++ L      GES Y
Sbjct: 201  EDPTFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLSLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K F
Sbjct: 321  RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDVKAEFIGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E  +  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGTDEAGKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +     
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  D+L I
Sbjct: 546  RLQLAKLTGDTLKQGLDLLGI 566



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/416 (37%), Positives = 216/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A V    LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEV----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +    I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLARNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L++ L      GES Y
Sbjct: 201 EDPTFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLSLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R RI   KAD ++YV DHR      Q      K   +     ++  G    M     P +
Sbjct: 321 RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDVKAEFIGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+   +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGTDEAGKIGKTVGIGAVKYADLSKN 436



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/319 (42%), Positives = 186/319 (58%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A V    LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEV----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +    I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L++ L      GES Y
Sbjct: 201  EDPTFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLSLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R RI   KAD ++YV DHR
Sbjct: 321  RYRIGRLKADRLLYVVDHR 339


>gi|269960720|ref|ZP_06175092.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834797|gb|EEZ88884.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 577

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALTDSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELAEDEKKAIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++ +DL+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVSMDDLQ-----GEIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  244 bits (622), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALTDSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQA 349



 Score =  242 bits (618), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALTDSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|323499566|ref|ZP_08104536.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315439|gb|EGA68480.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 577

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/564 (38%), Positives = 325/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +         +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADTRLGVAEQAQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQGGDEYCAEMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KG+ + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPPIVADLKEKGIAQEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PEEVTLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R++  ++ KN    L   E ++    VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAIKLIESKN--PSLETEEKTKIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR++SI   AGI+ + L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVSSIFAKAGISVDQL-----AGDIKVTEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + ++ V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 494  KALIAKLLQFEEAVLSVAREGQPHIMCSYLFELAGQFSSFYEACPILNSEDE----SVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +         +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADAALADTRLGVAEQAQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQGGDEYCAEMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KG+ + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPPIVADLKEKGIAQEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +         +  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADTRLGVAEQAQQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + D++    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQGGDEYCAEMWKKLVDITMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KG+ + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPPIVADLKEKGIAQEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|146280942|ref|YP_001171095.1| arginyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166232826|sp|A4VH02.1|SYR_PSEU5 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|145569147|gb|ABP78253.1| arginyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 579

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/597 (39%), Positives = 340/597 (56%), Gaps = 49/597 (8%)

Query: 481  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTSEGVLPEGLTPAIQVENTKDK---SHGDFASNIAMMLAKPAGM 57

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            K     P ++A+ +       +A  P  A+ I K+E+A PGF+N F +     ++++  +
Sbjct: 58   K-----PRELAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAQRLETAL 104

Query: 592  VNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
             +  +     + K RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R NHV
Sbjct: 105  ADAQLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIRQNHV 164

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFDE   F  RA + VV LQ
Sbjct: 165  GDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFDESPEFADRARELVVKLQ 221

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 767
              D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L +KGLL
Sbjct: 222  AGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNADLADIVEALREKGLL 281

Query: 768  ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R ++  AD ++Y  D
Sbjct: 282  TEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVD 341

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q +HF++  E A++AG ++    +++ +GFG + G D + FKTR G TVKL +LLDE 
Sbjct: 342  QRQALHFQMAFEVARRAGFVHEG-MQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEA 400

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
             +R+   +K KN   EL   EL +  +AV    +KYADLS +R  DY F+F+ ML   GN
Sbjct: 401  EQRAYTLVKGKN--PELDEAELRQIARAVGISAVKYADLSKHRTSDYRFNFELMLSFEGN 458

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA YLLYAYTR+AS+ R  G   +++     S  + L+ E+E ALA  L +  +VL  V 
Sbjct: 459  TAPYLLYAYTRVASVFRKLGKGIDEI-----SGQIQLDAEQELALAAKLAQFGEVLNSVG 513

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
                 H LC YLYD++  FS FY++C  +  + E + ++    RL LA  T + +K+
Sbjct: 514  EKGEPHLLCAYLYDLAGLFSSFYEHCPILGAEQEAQKQS----RLRLAALTGRTLKQ 566



 Score =  229 bits (585), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 141/362 (38%), Positives = 202/362 (55%), Gaps = 37/362 (10%)

Query: 91  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1   MKDSIRHLIQQALVRLTSEGVLPEGLTPAIQVENTKDK---SHGDFASNIAMMLAKPAGM 57

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
           K     P ++A+ +       +A  P  A+ I K+E+A PGF+N F +     ++++  +
Sbjct: 58  K-----PRELAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAQRLETAL 104

Query: 202 VNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
            +  +     + K RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R NHV
Sbjct: 105 ADAQLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIRQNHV 164

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFDE   F  RA + VV LQ
Sbjct: 165 GDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFDESPEFADRARELVVKLQ 221

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 377
             D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L +KGLL
Sbjct: 222 AGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNADLADIVEALREKGLL 281

Query: 378 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R ++  AD ++Y  D
Sbjct: 282 TEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVD 341

Query: 433 HR 434
            R
Sbjct: 342 QR 343



 Score =  229 bits (585), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 141/362 (38%), Positives = 202/362 (55%), Gaps = 37/362 (10%)

Query: 1108 LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTSEGVLPEGLTPAIQVENTKDK---SHGDFASNIAMMLAKPAGM 57

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            K     P ++A+ +       +A  P  A+ I K+E+A PGF+N F +     ++++  +
Sbjct: 58   K-----PRELAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAQRLETAL 104

Query: 1219 VNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
             +  +     + K RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R NHV
Sbjct: 105  ADAQLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIRQNHV 164

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFDE   F  RA + VV LQ
Sbjct: 165  GDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFDESPEFADRARELVVKLQ 221

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 1394
              D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L +KGLL
Sbjct: 222  AGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNADLADIVEALREKGLL 281

Query: 1395 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R ++  AD ++Y  D
Sbjct: 282  TEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVD 341

Query: 1450 HR 1451
             R
Sbjct: 342  QR 343


>gi|350530641|ref|ZP_08909582.1| arginyl-tRNA synthetase [Vibrio rotiferianus DAT722]
          Length = 577

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELAEDEKKAIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++ +DL+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVSMDDLQ-----GEIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/414 (35%), Positives = 222/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R EE  AD ++Y  D R +  ++QA     K   I  S S +       +     P 
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPESVSLEHHAFGMMLGKDGKPF 381

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPELG-DKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  D+  ++A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADL 435



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|156973665|ref|YP_001444572.1| arginyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|388599667|ref|ZP_10158063.1| arginyl-tRNA ligase [Vibrio campbellii DS40M4]
 gi|424033638|ref|ZP_17773051.1| arginine--tRNA ligase [Vibrio cholerae HENC-01]
 gi|424041255|ref|ZP_17779231.1| arginine--tRNA ligase [Vibrio cholerae HENC-02]
 gi|424047118|ref|ZP_17784679.1| arginine--tRNA ligase [Vibrio cholerae HENC-03]
 gi|166200586|sp|A7MT26.1|SYR_VIBHB RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|156525259|gb|ABU70345.1| hypothetical protein VIBHAR_01368 [Vibrio harveyi ATCC BAA-1116]
 gi|408874297|gb|EKM13471.1| arginine--tRNA ligase [Vibrio cholerae HENC-01]
 gi|408884416|gb|EKM23160.1| arginine--tRNA ligase [Vibrio cholerae HENC-03]
 gi|408890930|gb|EKM28897.1| arginine--tRNA ligase [Vibrio cholerae HENC-02]
          Length = 577

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELAEDEKKAIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++ +DL+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVSMDDLQ-----GEIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQA 349



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|146312088|ref|YP_001177162.1| arginyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166987303|sp|A4WBN1.1|SYR_ENT38 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|145318964|gb|ABP61111.1| arginyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 577

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 319/570 (55%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K               + +A +V + L  N     + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLGMP---------PRQLAELVLTHLDLN----GIANKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    +   + +   GV  P   K   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLASHVDAALKSERLGVAQP---KAETIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DED  F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDAAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLAYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKKLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPAEELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L  AA    V 
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANIDESALANAA----VV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  D E  
Sbjct: 488  ITEDREAQLAARLLQFEETLTVVAREGTPHVMCSYLYDLAGLFSGFYEHCPILSADNE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                   RL LA+ TAK +K   D L I T
Sbjct: 546  --EARNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 188/334 (56%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K               + +A +V + L  N     + +K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLGMP---------PRQLAELVLTHLDLN----GIANKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    +   + +   GV  P   K   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLASHVDAALKSERLGVAQP---KAETIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DED  F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDAAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLAYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKKLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  226 bits (576), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 187/333 (56%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K               + +A +V + L  N     + +K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLGMP---------PRQLAELVLTHLDLN----GIANKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    +   + +   GV  P   K   ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLASHVDAALKSERLGVAQP---KAETIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DED  F +RA   VV LQ  D  +++ W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDAAFAERARSYVVKLQGGDEYFREMWRKLVDITMSQNQLAYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKKLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|378766910|ref|YP_005195374.1| arginyl-tRNA synthetase ArgS [Pantoea ananatis LMG 5342]
 gi|386079088|ref|YP_005992613.1| arginyl-tRNA synthetase ArgS [Pantoea ananatis PA13]
 gi|354988269|gb|AER32393.1| arginyl-tRNA synthetase ArgS [Pantoea ananatis PA13]
 gi|365186387|emb|CCF09337.1| arginyl-tRNA synthetase ArgS [Pantoea ananatis LMG 5342]
          Length = 576

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/568 (38%), Positives = 329/568 (57%), Gaps = 42/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL R +  E  +    N +Q P L     +   ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 82   FINIFLDRGWLAEHAR----NALQHPRLGVARVEPQTIVVDYSAPNVAKEMHVGHVRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYREA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            K+ +DED  F +RA + VV LQ  D   ++ W+ + D++    Q IYDRLNVTLT +   
Sbjct: 197  KRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHIYDRLNVTLTRKDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 800
            GES Y   +  +V  L+ KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 257  GESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTT 316

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+A  + R E   AD ++Y  D  Q  H +      +KAG + P    ++   FG++LG+
Sbjct: 317  DIACAKYRYETLHADRVIYYIDSRQHQHLQQAWTIVRKAGYV-PESVPLEHHAFGMMLGK 375

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D + FKTRSG T+KLS+LLDE   R+   + +KN   E++  E     + V    +KYAD
Sbjct: 376  DGRPFKTRSGGTIKLSDLLDEAYDRAYSLVSEKN--PEMSEEERRALAEVVGVSAVKYAD 433

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI ++ ++       ++L 
Sbjct: 434  LSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIEADAIQ-----ADITLT 488

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             ++E  LA  LL+  +V+  V RD   H +C YLYD++  FS FY++C  +  + E   +
Sbjct: 489  DDREALLATRLLQFEEVITQVARDGTPHVMCAYLYDVAGLFSGFYEHCPILAAEDEATRQ 548

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +    RL +A  TAK +K   D L I+T
Sbjct: 549  S----RLQIAALTAKTLKLGLDTLGIKT 572



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 129/332 (38%), Positives = 195/332 (58%), Gaps = 30/332 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL R +  E  +    N +Q P L     +   ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 82  FINIFLDRGWLAEHAR----NALQHPRLGVARVEPQTIVVDYSAPNVAKEMHVGHVRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+
Sbjct: 138 IGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYREA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           K+ +DED  F +RA + VV LQ  D   ++ W+ + D++    Q IYDRLNVTLT +   
Sbjct: 197 KRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHIYDRLNVTLTRKDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 410
           GES Y   +  +V  L+ KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 257 GESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTT 316

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           D+A  + R E   AD ++Y  D R +  + QA
Sbjct: 317 DIACAKYRYETLHADRVIYYIDSRQHQHLQQA 348



 Score =  231 bits (590), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 195/331 (58%), Gaps = 31/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL R +  E  +    N +Q P L     +   ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 82   FINIFLDRGWLAEHAR----NALQHPRLGVARVEPQTIVVDYSAPNVAKEMHVGHVRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEMA-LADLEGFYREA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            K+ +DED  F +RA + VV LQ  D   ++ W+ + D++    Q IYDRLNVTLT +   
Sbjct: 197  KRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHIYDRLNVTLTRKDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 1427
            GES Y   +  +V  L+ KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 257  GESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTT 316

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+A  + R E   AD ++Y  D R  HQ LQ
Sbjct: 317  DIACAKYRYETLHADRVIYYIDSRQ-HQHLQ 346


>gi|340363107|ref|ZP_08685458.1| arginine--tRNA ligase [Neisseria macacae ATCC 33926]
 gi|339886631|gb|EGQ76270.1| arginine--tRNA ligase [Neisseria macacae ATCC 33926]
          Length = 572

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/561 (41%), Positives = 319/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K F
Sbjct: 321  RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDAKAEFIGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVLRKAGEWD-------ATAPTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY  +T FS FY+ C  ++  AEG  +     
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEACPILK--AEGATR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  D+L I
Sbjct: 546  RLQLAKLTGDTLKQGLDLLGI 566



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/416 (37%), Positives = 217/416 (52%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R RI   KAD ++YV DHR      Q      K   +   + ++  G    M     P +
Sbjct: 321 RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  222 bits (565), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/319 (42%), Positives = 185/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R RI   KAD ++YV DHR
Sbjct: 321  RYRIGRLKADRLLYVVDHR 339


>gi|417320419|ref|ZP_12106965.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
 gi|328473382|gb|EGF44230.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 577

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 320/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLNGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADSRLGVAAEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  ++L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDELQ-----GDIQITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLNGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADAALADSRLGVAAEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQA 349



 Score =  243 bits (619), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLNGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADSRLGVAAEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|28897635|ref|NP_797240.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838587|ref|ZP_01991254.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260365999|ref|ZP_05778484.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260878212|ref|ZP_05890567.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895648|ref|ZP_05904144.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|31076998|sp|Q87RD6.1|SYR_VIBPA RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|28805847|dbj|BAC59124.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149748005|gb|EDM58864.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308088188|gb|EFO37883.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308090109|gb|EFO39804.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308111274|gb|EFO48814.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 577

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 320/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADSRLGVAAEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  ++L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDELQ-----GDIQITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADAALADSRLGVAAEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQA 349



 Score =  242 bits (618), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADSRLGVAAEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|291617771|ref|YP_003520513.1| ArgS [Pantoea ananatis LMG 20103]
 gi|291152801|gb|ADD77385.1| ArgS [Pantoea ananatis LMG 20103]
          Length = 576

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/568 (38%), Positives = 329/568 (57%), Gaps = 42/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL R +  E  +    N +Q P L     +   ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 82   FINIFLDRGWLAEHAR----NALQHPRLGVACVEPQTIVVDYSAPNVAKEMHVGHVRSTI 137

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYREA 196

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            K+ +DED  F +RA + VV LQ  D   ++ W+ + D++    Q IYDRLNVTLT +   
Sbjct: 197  KRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHIYDRLNVTLTRKDVM 256

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 800
            GES Y   +  +V  L+ KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 257  GESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTT 316

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+A  + R E   AD ++Y  D  Q  H +      +KAG + P    ++   FG++LG+
Sbjct: 317  DIACAKYRYETLHADRVIYYIDSRQHQHLQQAWTIVRKAGYV-PESVPLEHHAFGMMLGK 375

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D + FKTRSG T+KLS+LLDE   R+   + +KN   E++  E     + V    +KYAD
Sbjct: 376  DGRPFKTRSGGTIKLSDLLDEAYDRAYSLVSEKN--PEMSEEERRALAEVVGVSAVKYAD 433

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI ++ ++       ++L 
Sbjct: 434  LSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIEADAIQ-----ADITLT 488

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             ++E  LA  LL+  +V+  V RD   H +C YLYD++  FS FY++C  +  + E   +
Sbjct: 489  DDREALLATRLLQFEEVITQVARDGTPHVMCAYLYDVAGLFSGFYEHCPILAAEDEATRQ 548

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +    RL +A  TAK +K   D L I+T
Sbjct: 549  S----RLQIAALTAKTLKLGLDTLGIKT 572



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 129/332 (38%), Positives = 195/332 (58%), Gaps = 30/332 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL R +  E  +    N +Q P L     +   ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 82  FINIFLDRGWLAEHAR----NALQHPRLGVACVEPQTIVVDYSAPNVAKEMHVGHVRSTI 137

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+
Sbjct: 138 IGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYREA 196

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           K+ +DED  F +RA + VV LQ  D   ++ W+ + D++    Q IYDRLNVTLT +   
Sbjct: 197 KRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHIYDRLNVTLTRKDVM 256

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 410
           GES Y   +  +V  L+ KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 257 GESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTT 316

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           D+A  + R E   AD ++Y  D R +  + QA
Sbjct: 317 DIACAKYRYETLHADRVIYYIDSRQHQHLQQA 348



 Score =  231 bits (590), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 195/331 (58%), Gaps = 31/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL R +  E  +    N +Q P L     +   ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 82   FINIFLDRGWLAEHAR----NALQHPRLGVACVEPQTIVVDYSAPNVAKEMHVGHVRSTI 137

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+
Sbjct: 138  IGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEMA-LADLEGFYREA 196

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            K+ +DED  F +RA + VV LQ  D   ++ W+ + D++    Q IYDRLNVTLT +   
Sbjct: 197  KRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHIYDRLNVTLTRKDVM 256

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 1427
            GES Y   +  +V  L+ KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 257  GESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTT 316

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+A  + R E   AD ++Y  D R  HQ LQ
Sbjct: 317  DIACAKYRYETLHADRVIYYIDSRQ-HQHLQ 346


>gi|386815757|ref|ZP_10102975.1| arginyl-tRNA synthetase [Thiothrix nivea DSM 5205]
 gi|386420333|gb|EIJ34168.1| arginyl-tRNA synthetase [Thiothrix nivea DSM 5205]
          Length = 579

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/600 (38%), Positives = 331/600 (55%), Gaps = 35/600 (5%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++R  L D  T A+      LG      A        +FGD+Q N  MA  K  K    
Sbjct: 1    MNIRQLLDDRITAALH----SLGAPETVSAIVKPSARPEFGDYQANGVMAAAKQLK---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP ++A  +  V+         L+ + +K+EVA PGF+N+ L   +  E +      G
Sbjct: 53   -TNPRELATRLLEVL--------DLSDMAEKLEVAGPGFINIHLKNAWLAESLGSSPEKG 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                  +    ++VD+S PN+AKEMHVGHLRSTIIGD ++R+L + GH V+R NHVGDWG
Sbjct: 104  RLGGVSST---IVVDYSGPNLAKEMHVGHLRSTIIGDAVARVLAFQGHKVIRQNHVGDWG 160

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIAH+          S  ++DL+AFY+E+KKRFD++  F K A   VV LQ  D 
Sbjct: 161  TQFGMLIAHMVSLQAQGGELSMQLSDLEAFYREAKKRFDDEPDFAKTARDYVVKLQSGDA 220

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 771
            +  K W+   D+S    + +Y+ L V LT    + ES Y   +  +V  L+  GLL  D 
Sbjct: 221  ECLKLWQQFIDISLHHCEDVYECLGVQLTRADVKPESAYNDDLANIVSELQANGLLVEDQ 280

Query: 772  GRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G +  + ++     GSI P+ + KSDGG+ Y T+DLAA+R R     AD ++Y TD  Q 
Sbjct: 281  GAQCAFLDEFKNKDGSITPIIVQKSDGGYLYATTDLAALRYRSGSLNADRVLYFTDARQS 340

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
            +HF+ +   A+KAG +   +  ++ + FG +LGED K FKTR+G TVKL+ELL E   R+
Sbjct: 341  LHFQQVFTLARKAGFVR-EEMALEHMPFGNMLGEDGKPFKTRTGGTVKLAELLTEAQERA 399

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               + +KN   EL   E  +    V  G +KYADLS NRN DY+F+++ ML   GNTA Y
Sbjct: 400  FTLVSEKN--PELPEAERQDIAHKVGIGAVKYADLSKNRNSDYIFNWESMLSFEGNTAPY 457

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            L YAY RI SI R     S  L ++ +   +SL+   E  LA  LL+  +    V ++  
Sbjct: 458  LQYAYARIRSIFRKR-TPSPTLPLSGEGAKISLQEAAERTLAVKLLQFAEATDSVAKEGL 516

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             +HLC YLY+++  F  FY+ C  ++   EG  + V   RL LAE TA+ ++    +L I
Sbjct: 517  PNHLCTYLYELAGNFMSFYEACPILK---EGVAEEVRNSRLQLAELTAQTLQAGLGLLGI 573



 Score =  231 bits (589), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/445 (35%), Positives = 225/445 (50%), Gaps = 36/445 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++R  L D  T A+      LG      A        +FGD+Q N  MA  K  K    
Sbjct: 1   MNIRQLLDDRITAALH----SLGAPETVSAIVKPSARPEFGDYQANGVMAAAKQLK---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP ++A  +  V+         L+ + +K+EVA PGF+N+ L   +  E +      G
Sbjct: 53  -TNPRELATRLLEVL--------DLSDMAEKLEVAGPGFINIHLKNAWLAESLGSSPEKG 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                 +    ++VD+S PN+AKEMHVGHLRSTIIGD ++R+L + GH V+R NHVGDWG
Sbjct: 104 RLGGVSST---IVVDYSGPNLAKEMHVGHLRSTIIGDAVARVLAFQGHKVIRQNHVGDWG 160

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIAH+          S  ++DL+AFY+E+KKRFD++  F K A   VV LQ  D 
Sbjct: 161 TQFGMLIAHMVSLQAQGGELSMQLSDLEAFYREAKKRFDDEPDFAKTARDYVVKLQSGDA 220

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 381
           +  K W+   D+S    + +Y+ L V LT    + ES Y   +  +V  L+  GLL  D 
Sbjct: 221 ECLKLWQQFIDISLHHCEDVYECLGVQLTRADVKPESAYNDDLANIVSELQANGLLVEDQ 280

Query: 382 GRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR-S 435
           G +  + ++     GSI P+ + KSDGG+ Y T+DLAA+R R     AD ++Y TD R S
Sbjct: 281 GAQCAFLDEFKNKDGSITPIIVQKSDGGYLYATTDLAALRYRSGSLNADRVLYFTDARQS 340

Query: 436 YHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM----NVPVRDRMSVRDYLSDVFTHAVQV 491
            H   Q +    +K G      +        M      P + R      L+++ T A + 
Sbjct: 341 LH--FQQVFTLARKAGFVREEMALEHMPFGNMLGEDGKPFKTRTGGTVKLAELLTEAQER 398

Query: 492 AFPELGDKTASVASTNEKYV-HKFG 515
           AF  + +K   +     + + HK G
Sbjct: 399 AFTLVSEKNPELPEAERQDIAHKVG 423



 Score =  229 bits (585), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/358 (38%), Positives = 195/358 (54%), Gaps = 28/358 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++R  L D  T A+      LG      A        +FGD+Q N  MA  K  K    
Sbjct: 1    MNIRQLLDDRITAALH----SLGAPETVSAIVKPSARPEFGDYQANGVMAAAKQLK---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP ++A  +  V+         L+ + +K+EVA PGF+N+ L   +  E +      G
Sbjct: 53   -TNPRELATRLLEVL--------DLSDMAEKLEVAGPGFINIHLKNAWLAESLGSSPEKG 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                  +    ++VD+S PN+AKEMHVGHLRSTIIGD ++R+L + GH V+R NHVGDWG
Sbjct: 104  RLGGVSST---IVVDYSGPNLAKEMHVGHLRSTIIGDAVARVLAFQGHKVIRQNHVGDWG 160

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIAH+          S  ++DL+AFY+E+KKRFD++  F K A   VV LQ  D 
Sbjct: 161  TQFGMLIAHMVSLQAQGGELSMQLSDLEAFYREAKKRFDDEPDFAKTARDYVVKLQSGDA 220

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 1398
            +  K W+   D+S    + +Y+ L V LT    + ES Y   +  +V  L+  GLL  D 
Sbjct: 221  ECLKLWQQFIDISLHHCEDVYECLGVQLTRADVKPESAYNDDLANIVSELQANGLLVEDQ 280

Query: 1399 GRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            G +  + ++     GSI P+ + KSDGG+ Y T+DLAA+R R     AD ++Y TD R
Sbjct: 281  GAQCAFLDEFKNKDGSITPIIVQKSDGGYLYATTDLAALRYRSGSLNADRVLYFTDAR 338


>gi|386016122|ref|YP_005934407.1| arginyl-tRNA synthetase ArgS [Pantoea ananatis AJ13355]
 gi|327394189|dbj|BAK11611.1| arginyl-tRNA synthetase ArgS [Pantoea ananatis AJ13355]
          Length = 562

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/568 (38%), Positives = 328/568 (57%), Gaps = 42/568 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 21   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 67

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 628
            F+N+FL R +  E  +    N +Q P L     +   ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 68   FINIFLDRGWLAEHAR----NALQHPRLGVARVEPQTIVVDYSAPNVAKEMHVGHVRSTI 123

Query: 629  IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 688
            IGD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+
Sbjct: 124  IGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYREA 182

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 745
            K+ +DED  F +RA + VV LQ  D   ++ W+ + D++    Q IYDRLNVTLT +   
Sbjct: 183  KRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHIYDRLNVTLTRKDVM 242

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 800
            GES Y   +  +V  L+ KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 243  GESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTT 302

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+A  + R E   AD ++Y  D  Q  H +      +KAG + P    ++   FG++LG+
Sbjct: 303  DIACAKYRYETLHADRVIYYIDSRQHQHLQQAWTIVRKAGYV-PESVPLEHHAFGMMLGK 361

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D + FKTRSG T+KLS+LLDE   R+   + +KN   E++  E     + V    +KYAD
Sbjct: 362  DGRPFKTRSGGTIKLSDLLDEAYDRAYSLVSEKN--PEMSEEERRALAEVVGVSAVKYAD 419

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI ++     A    ++L 
Sbjct: 420  LSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIEAD-----AIQADITLT 474

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
             ++E  LA  LL+  +V+  V RD   H +C YLYD++  FS FY++C  +  + E   +
Sbjct: 475  DDREALLATRLLQFEEVITQVARDGTPHVMCAYLYDVAGLFSGFYEHCPILAAEDEATRQ 534

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +    RL +A  TAK +K   D L I+T
Sbjct: 535  S----RLQIAALTAKTLKLGLDTLGIKT 558



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/332 (38%), Positives = 195/332 (58%), Gaps = 30/332 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 21  QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 67

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 238
           F+N+FL R +  E  +    N +Q P L     +   ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 68  FINIFLDRGWLAEHAR----NALQHPRLGVARVEPQTIVVDYSAPNVAKEMHVGHVRSTI 123

Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 298
           IGD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+
Sbjct: 124 IGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEM-ALADLEGFYREA 182

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 355
           K+ +DED  F +RA + VV LQ  D   ++ W+ + D++    Q IYDRLNVTLT +   
Sbjct: 183 KRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHIYDRLNVTLTRKDVM 242

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 410
           GES Y   +  +V  L+ KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 243 GESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTT 302

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           D+A  + R E   AD ++Y  D R +  + QA
Sbjct: 303 DIACAKYRYETLHADRVIYYIDSRQHQHLQQA 334



 Score =  231 bits (590), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 195/331 (58%), Gaps = 31/331 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K        + P  +A+++          +  L  +  K+E+A PG
Sbjct: 21   QFGDYQANGIMAVAKKLG-----QAPRQLAETVIQ--------HLDLTGIASKVEIAGPG 67

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
            F+N+FL R +  E  +    N +Q P L     +   ++VD+S+PN+AKEMHVGH+RSTI
Sbjct: 68   FINIFLDRGWLAEHAR----NALQHPRLGVARVEPQTIVVDYSAPNVAKEMHVGHVRSTI 123

Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKES 1315
            IGD   R L +LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+E+
Sbjct: 124  IGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNENHAEMA-LADLEGFYREA 182

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER--- 1372
            K+ +DED  F +RA + VV LQ  D   ++ W+ + D++    Q IYDRLNVTLT +   
Sbjct: 183  KRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHIYDRLNVTLTRKDVM 242

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTS 1427
            GES Y   +  +V  L+ KGL    +G  +++    +++   PM ++  K DGG+ Y T+
Sbjct: 243  GESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTT 302

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            D+A  + R E   AD ++Y  D R  HQ LQ
Sbjct: 303  DIACAKYRYETLHADRVIYYIDSRQ-HQHLQ 332


>gi|422018255|ref|ZP_16364812.1| arginyl-tRNA ligase [Providencia alcalifaciens Dmel2]
 gi|414104547|gb|EKT66112.1| arginyl-tRNA ligase [Providencia alcalifaciens Dmel2]
          Length = 576

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/605 (37%), Positives = 333/605 (55%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMLAA----GAPEGCDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ I S +         L  +  K+E+A PGF+N+F+   +     +  + + 
Sbjct: 53   -MPPRQLAEQIVSQL--------DLEGIASKVEIAGPGFINIFIDPTWIAAHAEKALTSD 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P        +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGLAPVQAET---IVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDASDMALADLEEFYREAKKHYDEDEDFAVRARGYVVKLQS 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTRSG TV+LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMALEHHMFGMMLGKDGKPFKTRSGGTVRLSDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +++KN   ++   EL      V  G +KYADLS NR  DY+F +D ML   GNT
Sbjct: 399  ERAQTLIREKN--PDMAEDELLNLANVVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+ASI + A I   DL     + P+ LE   E ALA  L++  + ++ V R
Sbjct: 457  APYMQYAYTRVASIFKKADITESDL-----TLPIVLEAPHEMALATRLMQFEETILTVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H +C YLYD++  FS FY++C  +  D + + ++    RL LA  T K +K   D 
Sbjct: 512  EGTPHVMCAYLYDLAGLFSSFYEHCPILSADTDAQRQS----RLKLALLTQKTLKVGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIET 572



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/369 (36%), Positives = 201/369 (54%), Gaps = 32/369 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M   K       
Sbjct: 1   MNIQAILSDKISAAMLAA----GAPEGCDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ I S +         L  +  K+E+A PGF+N+F+   +     +  + + 
Sbjct: 53  -MPPRQLAEQIVSQL--------DLEGIASKVEIAGPGFINIFIDPTWIAAHAEKALTSD 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P        +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104 RLGLAPVQAET---IVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KVQNEDASDMALADLEEFYREAKKHYDEDEDFAVRARGYVVKLQS 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280 ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 434 RSYHQVLQA 442
           R +  ++QA
Sbjct: 340 RQHQHLMQA 348



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/368 (36%), Positives = 200/368 (54%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD  + A+  A    G      A   +    +FGD+Q N  M   K       
Sbjct: 1    MNIQAILSDKISAAMLAA----GAPEGCDALVRQSAKAQFGDYQANGVMGAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ I S +         L  +  K+E+A PGF+N+F+   +     +  + + 
Sbjct: 53   -MPPRQLAEQIVSQL--------DLEGIASKVEIAGPGFINIFIDPTWIAAHAEKALTSD 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P        +++D+S+PN+AK+MHVGHLRSTIIGD  +R  E++GH V+R NHVG
Sbjct: 104  RLGLAPVQAET---IVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       +ADL+ FY+E+KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNEDASDMALADLEEFYREAKKHYDEDEDFAVRARGYVVKLQS 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D   +K W  + D++ +  Q+ Y RLNVTLTE    GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCRKMWRKLVDITMQQNQETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++ +   ++   PM ++  K DGGF Y T+D+A  + R E   AD  +Y  D 
Sbjct: 280  ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|392979641|ref|YP_006478229.1| arginyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
 gi|392325574|gb|AFM60527.1| arginyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
          Length = 577

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/567 (40%), Positives = 321/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +    +   + +     T  +   V++D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLASHVDAALKSDRLGVTQPEAQTVVIDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     GES 
Sbjct: 201  DEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQITYNRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKQLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLIQAWTIVRKAGYV-PDCVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I   D  V A +T V++  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANI---DESVLANAT-VTITE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + E    +
Sbjct: 491  DREAQLAARLLQFEETLSVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAENE----S 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA+ TAK +K   D L I T
Sbjct: 547  VRNSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  226 bits (577), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 185/331 (55%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +    +   + +     T  +   V++D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLASHVDAALKSDRLGVTQPEAQTVVIDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     GES 
Sbjct: 201 DEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQITYNRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKQLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLIQA 348



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/330 (38%), Positives = 184/330 (55%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +    +   + +     T  +   V++D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLASHVDAALKSDRLGVTQPEAQTVVIDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     GES 
Sbjct: 201  DEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQITYNRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKQLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLIQ 347


>gi|308051227|ref|YP_003914793.1| arginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307633417|gb|ADN77719.1| arginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 582

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 322/565 (56%), Gaps = 38/565 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K        KNP ++A  I          N   + ++ K E+A PGF+
Sbjct: 41   GDLATNLAMMLAK-----PAGKNPRELAGLIID--------NLPESTLVAKTEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N FL   + G+QI+ I  +    V P  +     ++ D+S+PN+AKEM V H+RST+IGD
Sbjct: 88   NFFLDAGWLGKQIETIASDDRANVAP--IAAPQTIVTDYSAPNVAKEMAVHHIRSTVIGD 145

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
             ++R LE+LGH+VVR NH+GDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK 
Sbjct: 146  AVTRTLEFLGHNVVRANHIGDWGTQFGMLIAYLE-KMENESAADMDLSDLEAFYREAKKC 204

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 748
            +DED  F +RA   VV LQ  D      W  + D++    Q IYDRL V+L+     GES
Sbjct: 205  YDEDGEFAERARNYVVKLQGGDEYCNAMWRKLVDITMAQNQAIYDRLGVSLSNDDIMGES 264

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 803
             Y   + ++V  L K+GL   D G K+++     G+D   + + I K DGGF Y T+D+A
Sbjct: 265  LYNPMLPEIVADLTKQGLAVEDQGAKVVFLDEFKGKDGNPMGVIIQKRDGGFLYTTTDIA 324

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
            A + R++   AD I+Y  D  Q  H +     A+KAG L P+ T  +   FG++LG+D K
Sbjct: 325  AAKYRVDTFAADRILYFIDSRQAQHLQQAWLIARKAGYL-PDTTTTEHCAFGMMLGKDGK 383

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSG TVKL++LL+E  +R+   + +KN   +L    L      VA   +KY+DLS 
Sbjct: 384  PFKTRSGGTVKLADLLEEAHQRATKLIGEKN--PDLQGDALDTIAATVAMASVKYSDLSK 441

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA Y+LYA++RI SI R AG+N+ +L     +  V L H+K
Sbjct: 442  NRTTDYVFDWDNMLTFEGNTAPYMLYAFSRIQSIFRKAGVNAAEL-----NGTVVLAHDK 496

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E ALA+ L++ ND +  V      H +C YLY+++ AF  FY+ C   + D     K   
Sbjct: 497  EEALAQKLVQFNDAVQGVANKGMPHLMCTYLYELAGAFMSFYEACPINKDDVAEDAK--- 553

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL L  ATA  +K    +L I T
Sbjct: 554  ASRLRLCAATANTLKVGLGLLGINT 578



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/418 (35%), Positives = 220/418 (52%), Gaps = 38/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K        KNP ++A  I          N   + ++ K E+A PGF+
Sbjct: 41  GDLATNLAMMLAK-----PAGKNPRELAGLIID--------NLPESTLVAKTEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N FL   + G+QI+ I  +    V P  +     ++ D+S+PN+AKEM V H+RST+IGD
Sbjct: 88  NFFLDAGWLGKQIETIASDDRANVAP--IAAPQTIVTDYSAPNVAKEMAVHHIRSTVIGD 145

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
            ++R LE+LGH+VVR NH+GDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK 
Sbjct: 146 AVTRTLEFLGHNVVRANHIGDWGTQFGMLIAYLE-KMENESAADMDLSDLEAFYREAKKC 204

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 358
           +DED  F +RA   VV LQ  D      W  + D++    Q IYDRL V+L+     GES
Sbjct: 205 YDEDGEFAERARNYVVKLQGGDEYCNAMWRKLVDITMAQNQAIYDRLGVSLSNDDIMGES 264

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 413
            Y   + ++V  L K+GL   D G K+++     G+D   + + I K DGGF Y T+D+A
Sbjct: 265 LYNPMLPEIVADLTKQGLAVEDQGAKVVFLDEFKGKDGNPMGVIIQKRDGGFLYTTTDIA 324

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTA---KKMNVP 470
           A + R++   AD I+Y  D R    + QA     K   +  +++++         K   P
Sbjct: 325 AAKYRVDTFAADRILYFIDSRQAQHLQQAWLIARKAGYLPDTTTTEHCAFGMMLGKDGKP 384

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PEL-GDKTASVASTNEKYVHKFGDFQCN 520
            + R      L+D+   A Q A        P+L GD   ++A+T      K+ D   N
Sbjct: 385 FKTRSGGTVKLADLLEEAHQRATKLIGEKNPDLQGDALDTIAATVAMASVKYSDLSKN 442



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 187/328 (57%), Gaps = 27/328 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K        KNP ++A  I          N   + ++ K E+A PGF+
Sbjct: 41   GDLATNLAMMLAK-----PAGKNPRELAGLIID--------NLPESTLVAKTEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N FL   + G+QI+ I  +    V P  +     ++ D+S+PN+AKEM V H+RST+IGD
Sbjct: 88   NFFLDAGWLGKQIETIASDDRANVAP--IAAPQTIVTDYSAPNVAKEMAVHHIRSTVIGD 145

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
             ++R LE+LGH+VVR NH+GDWGTQFGMLIA+L+ K  +       ++DL+AFY+E+KK 
Sbjct: 146  AVTRTLEFLGHNVVRANHIGDWGTQFGMLIAYLE-KMENESAADMDLSDLEAFYREAKKC 204

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 1375
            +DED  F +RA   VV LQ  D      W  + D++    Q IYDRL V+L+     GES
Sbjct: 205  YDEDGEFAERARNYVVKLQGGDEYCNAMWRKLVDITMAQNQAIYDRLGVSLSNDDIMGES 264

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
             Y   + ++V  L K+GL   D G K+++     G+D   + + I K DGGF Y T+D+A
Sbjct: 265  LYNPMLPEIVADLTKQGLAVEDQGAKVVFLDEFKGKDGNPMGVIIQKRDGGFLYTTTDIA 324

Query: 1431 AIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            A + R++   AD I+Y  D R    + Q
Sbjct: 325  AAKYRVDTFAADRILYFIDSRQAQHLQQ 352


>gi|218548565|ref|YP_002382356.1| arginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|424815963|ref|ZP_18241114.1| arginyl-tRNA synthetase [Escherichia fergusonii ECD227]
 gi|226701420|sp|B7LPH0.1|SYR_ESCF3 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|218356106|emb|CAQ88723.1| arginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|325496983|gb|EGC94842.1| arginyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 577

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/567 (39%), Positives = 323/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPTFLAENVQQALKSDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R     +E       + PV +  
Sbjct: 435  SKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFR----KAEIAEEELAAAPVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSSFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K   D L I T
Sbjct: 547  VRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 195/333 (58%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPTFLAENVQQALKSDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 193/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPTFLAENVQQALKSDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|422805886|ref|ZP_16854318.1| arginyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|324113611|gb|EGC07586.1| arginyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 577

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/567 (39%), Positives = 323/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVQQALKSDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DYVF +D ML   GNTA Y+ YAYTR+ S+ R     +E       + PV +  
Sbjct: 435  SKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFR----KAEIAEEELAAAPVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C  +  + E     
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSSFYEHCPILSAENE----E 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K   D L I T
Sbjct: 547  VRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 195/333 (58%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAENVQQALKSDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198 KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 193/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  E ++  + +   GV  P   +K  ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAENVQQALKSDRLGVATP---EKQTIVVDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++K
Sbjct: 139  GDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALADLEGFYRDAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     G
Sbjct: 198  KHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|209695554|ref|YP_002263483.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238065084|sp|B6EI57.1|SYR_ALISL RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|208009506|emb|CAQ79795.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 577

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 217/564 (38%), Positives = 326/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +      L  K  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADERLGVALETKQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F   A   VV LQ  D      W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVTARGYVVKLQGGDAFCADMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL    DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNSMLAPIVADLQEKGLAVESDGAQVVYLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRFEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE  +R++  +++KN+  +L+  E ++    VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEQRAIALIEEKNK--DLSTEEKAKIATTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D +L   GNTA Y+ YAYTR+ASI   A ++ ++L     +  V +  EKE
Sbjct: 439  RTTDYIFDWDNILAFEGNTAPYMQYAYTRVASIFSKADLSMDNL-----AGEVKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V  +   H +C YL++++  FS FY+ C  +  D E    ++  
Sbjct: 494  KALITKLMQFEEAVQAVASEGQPHLMCAYLFELAGQFSSFYEACPILNNDDE----SIKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  D+L I T
Sbjct: 550  SRLKLAALTAKTIKQGLDLLGIET 573



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/398 (37%), Positives = 215/398 (54%), Gaps = 25/398 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +      L  K  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADERLGVALETKQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F   A   VV LQ  D      W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVTARGYVVKLQGGDAFCADMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL    DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNSMLAPIVADLQEKGLAVESDGAQVVYLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R EE  AD ++Y  D R +  ++QA     K   +  S S +       +     P 
Sbjct: 322 AKYRFEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGRPF 381

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEK 509
           + R      L+D+   A Q A   + +K   + ST EK
Sbjct: 382 KTRAGGTVRLADLLDEAEQRAIALIEEKNKDL-STEEK 418



 Score =  243 bits (619), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +      L  K  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADERLGVALETKQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F   A   VV LQ  D      W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVTARGYVVKLQGGDAFCADMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL    DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNSMLAPIVADLQEKGLAVESDGAQVVYLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRFEELNADRVLYFIDSRQHQHLMQ 348


>gi|261340259|ref|ZP_05968117.1| arginine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288317347|gb|EFC56285.1| arginine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 577

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 322/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +    +   + +   GV  P   +   +++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVSQP---EPQTIVIDYSAPNVAKEMHVGHLRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R  E+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTNEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++L
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G TVKLS+LLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 374  GKDGKPFKTRAGGTVKLSDLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+   L  A     V+
Sbjct: 432  ADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANIDESALANAT----VT 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  +++  
Sbjct: 488  ITEDREAQLAARLLQFEETLAVVARDGTPHVMCSYLYDLAGLFSGFYEHCPILSAESD-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              +V + RL LA+ TAK +K   D L I T
Sbjct: 546  --SVRSSRLKLAQLTAKTLKLGLDTLGIET 573



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/334 (38%), Positives = 186/334 (55%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +    +   + +   GV  P   +   +++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLEPAFLASHVDAALKSDRLGVSQP---EPQTIVIDYSAPNVAKEMHVGHLRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R  E+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTNEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198 KHYDEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258 ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  223 bits (567), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/333 (38%), Positives = 185/333 (55%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ +         T+  L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MPPRQLAEQVL--------THLDLTGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +    +   + +   GV  P   +   +++D+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLEPAFLASHVDAALKSDRLGVSQP---EPQTIVIDYSAPNVAKEMHVGHLRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R  E+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTNEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALADLEGFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D  + + W  + D++    Q  Y+RLNVTLT     G
Sbjct: 198  KHYDEDEAFAERARSYVVKLQGGDQYFLEMWRKLVDITMSQNQLTYNRLNVTLTRDDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ K L    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 258  ESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|148978252|ref|ZP_01814770.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962553|gb|EDK27830.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 577

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 320/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDEAFLAKQADAALADSRLGVAAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+++GL + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLPGIVADLKEQGLAKEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELAEDEKKAIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++ + L        + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVSMDSLE-----GEIKITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILIAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/414 (35%), Positives = 223/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FLNIFLDEAFLAKQADAALADSRLGVAAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+++GL + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNHMLPGIVADLKEQGLAKEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R EE  AD ++Y  D R +  ++QA     K   I  S S +       +     P 
Sbjct: 322 AKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPESVSLEHHAFGMMLGKDGKPF 381

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPELG-DKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  D+  ++A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADL 435



 Score =  243 bits (619), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 193/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDEAFLAKQADAALADSRLGVAAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+++GL + DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLPGIVADLKEQGLAKEDDGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQ 348


>gi|422110472|ref|ZP_16380469.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|309378705|emb|CBX22655.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 572

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 321/563 (57%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +Y+ L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLHPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ E+     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDAKAEFIGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGKWD-------ATAPTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  +VL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGATR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLARNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +Y+ L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLHPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ E+     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +   + ++  G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  221 bits (562), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +Y+ L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLHPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ E+     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|259908205|ref|YP_002648561.1| arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|387871047|ref|YP_005802420.1| protein argS [Erwinia pyrifoliae DSM 12163]
 gi|224963827|emb|CAX55329.1| Arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478133|emb|CAY74049.1| argS [Erwinia pyrifoliae DSM 12163]
          Length = 576

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/570 (39%), Positives = 332/570 (58%), Gaps = 46/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K         N     + +A  V  +L     L+ +  K+++A PG
Sbjct: 35   QFGDYQANGIMAVAK---------NLGMPPRQLAEKVLEQL----DLSGIAHKVDIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FL+  +   QI  ++      ++ V+P T      V++D+S+PN+AKEMHVGH+RS
Sbjct: 82   FINIFLAPQWLSAQIDSVLTAPKLGISPVEPKT------VVIDYSAPNVAKEMHVGHVRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD  +R L +LGH V+R NHVGDWGTQFGMLIA L+ +  ++  ++  +ADL+AFY+
Sbjct: 136  TIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEH-QETLALADLEAFYR 194

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
            E+K+ +DED  F +RA   VV LQ  D   +K W+ + D++    Q IYDR+NVTL    
Sbjct: 195  EAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNVTLARDD 254

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYT 314

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E  KAD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 315  TTDIACAKYRYETLKADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PENIPLEHHMFGMML 373

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLS+LLDE + R+   + +KN   ++   EL      V  G +KY
Sbjct: 374  GKDGKPFKTRAGGTIKLSDLLDEAIDRATRLVAEKN--PDMPAGELKALANIVGIGAVKY 431

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI++E     A S    
Sbjct: 432  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDAE-----AVSGTTR 486

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  ++E ALA  LL+ ++ +  V RD   H +C YLYD++  FS FY++C  +  + E  
Sbjct: 487  IIEDREAALAVRLLQFDETITQVARDGMPHVMCAYLYDLAGLFSGFYEHCPILNAEDEAT 546

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             ++    RL LA  TAK +K+  D L I T
Sbjct: 547  KQS----RLRLALLTAKTLKQGLDTLGIAT 572



 Score =  233 bits (593), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 199/334 (59%), Gaps = 34/334 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K         N     + +A  V  +L     L+ +  K+++A PG
Sbjct: 35  QFGDYQANGIMAVAK---------NLGMPPRQLAEKVLEQL----DLSGIAHKVDIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FL+  +   QI  ++      ++ V+P T      V++D+S+PN+AKEMHVGH+RS
Sbjct: 82  FINIFLAPQWLSAQIDSVLTAPKLGISPVEPKT------VVIDYSAPNVAKEMHVGHVRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD  +R L +LGH V+R NHVGDWGTQFGMLIA L+ +  ++  ++  +ADL+AFY+
Sbjct: 136 TIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEH-QETLALADLEAFYR 194

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
           E+K+ +DED  F +RA   VV LQ  D   +K W+ + D++    Q IYDR+NVTL    
Sbjct: 195 EAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNVTLARDD 254

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255 VMGESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYT 314

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E  KAD ++Y  D R +  ++QA
Sbjct: 315 TTDIACAKYRYETLKADRVLYYIDSRQHQHLMQA 348



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 198/333 (59%), Gaps = 34/333 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K         N     + +A  V  +L     L+ +  K+++A PG
Sbjct: 35   QFGDYQANGIMAVAK---------NLGMPPRQLAEKVLEQL----DLSGIAHKVDIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FL+  +   QI  ++      ++ V+P T      V++D+S+PN+AKEMHVGH+RS
Sbjct: 82   FINIFLAPQWLSAQIDSVLTAPKLGISPVEPKT------VVIDYSAPNVAKEMHVGHVRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD  +R L +LGH V+R NHVGDWGTQFGMLIA L+ +  ++  ++  +ADL+AFY+
Sbjct: 136  TIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEH-QETLALADLEAFYR 194

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
            E+K+ +DED  F +RA   VV LQ  D   +K W+ + D++    Q IYDR+NVTL    
Sbjct: 195  EAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNVTLARDD 254

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   +  +V  L+ KGL    +G  +++ +   ++   PM ++  K DGG+ Y 
Sbjct: 255  VMGESLYNDMLPGIVADLKAKGLAVESEGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYT 314

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E  KAD ++Y  D R +  ++Q
Sbjct: 315  TTDIACAKYRYETLKADRVLYYIDSRQHQHLMQ 347


>gi|418020598|ref|ZP_12659841.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
 gi|347604039|gb|EGY28762.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
          Length = 576

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/599 (37%), Positives = 339/599 (56%), Gaps = 46/599 (7%)

Query: 484  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 543
            + ++ + +A    G    + A   +    +FGD+Q N  M++ K+         P  +A 
Sbjct: 6    LLSNKINLAMIAAGASPDTDAQVRQSAKPQFGDYQANAVMSVAKVLNIP-----PRQLAD 60

Query: 544  SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQP 597
             I   +         LA +  KIE+A PGF+N+FL R +   Q+  I+      +  V P
Sbjct: 61   KIVQRL--------DLAGIAQKIEIAGPGFINIFLDRQWLAAQVDHILKAPKLGLTPVIP 112

Query: 598  PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
             T      +++D+S+PNIAKEMHVGHLRSTIIGD  +R L  LGH+V+R NHVGDWGTQF
Sbjct: 113  QT------IVIDYSAPNIAKEMHVGHLRSTIIGDATARTLTLLGHNVIRANHVGDWGTQF 166

Query: 658  GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            GMLIA+L+ K          ++DL+ FY+ +KK +DED+ F + A   VV LQ  D   +
Sbjct: 167  GMLIAYLE-KMQRENADDMALSDLEKFYRAAKKNYDEDKEFAQHARAYVVKLQAGDEYCR 225

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRK 774
              W  + D++    Q  Y RL+VTLT+    GES Y   +  ++  L+ KGL    +G  
Sbjct: 226  SMWRKLVDITMEQNQLSYQRLHVTLTKEDIMGESLYNSMLPGIIADLKTKGLAVESNGAT 285

Query: 775  IMW-GE--DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            +++ GE  ++   PM ++  K DGG+ Y T+D+A  + R +   AD I+Y TD  Q  H 
Sbjct: 286  VVFVGEYKNKKGEPMGVIVQKEDGGYLYATTDIACAKYRYQTLGADRILYYTDSRQHQHL 345

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
              + + A++AG + P    ++   FG++L +  K FK+R+G+ +KL++LLDE + R+   
Sbjct: 346  TQIWQIARQAGYV-PESMPLEHHMFGMMLDKTGKPFKSRTGENIKLADLLDEAIERAGKL 404

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            +++KN   +++P EL +   AV  G +KYADLS NR  DY+F +D ML   GNTA Y+ Y
Sbjct: 405  IREKN--PDISPQELKQVADAVGIGALKYADLSKNRTTDYIFDWDNMLTFDGNTAPYIQY 462

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            AYTRI SI + A I+ E L +     PV +  ++E  L  +LL+  +++  V RD   H 
Sbjct: 463  AYTRIISIFKRAAIDEEHLNL-----PVIITEDREAVLTTSLLQFEEIITTVARDGTPHV 517

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +C YLY+++  FS FY++C  +    E   ++    RL LA  TAK +K+  DIL I+T
Sbjct: 518  MCSYLYNLAVLFSSFYEHCPILNAGNEQTCQS----RLKLALLTAKTLKQGLDILGIQT 572



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 147/436 (33%), Positives = 223/436 (51%), Gaps = 39/436 (8%)

Query: 94  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 153
           + ++ + +A    G    + A   +    +FGD+Q N  M++ K+         P  +A 
Sbjct: 6   LLSNKINLAMIAAGASPDTDAQVRQSAKPQFGDYQANAVMSVAKVLNIP-----PRQLAD 60

Query: 154 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQP 207
            I   +         LA +  KIE+A PGF+N+FL R +   Q+  I+      +  V P
Sbjct: 61  KIVQRL--------DLAGIAQKIEIAGPGFINIFLDRQWLAAQVDHILKAPKLGLTPVIP 112

Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
            T      +++D+S+PNIAKEMHVGHLRSTIIGD  +R L  LGH+V+R NHVGDWGTQF
Sbjct: 113 QT------IVIDYSAPNIAKEMHVGHLRSTIIGDATARTLTLLGHNVIRANHVGDWGTQF 166

Query: 268 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           GMLIA+L+ K          ++DL+ FY+ +KK +DED+ F + A   VV LQ  D   +
Sbjct: 167 GMLIAYLE-KMQRENADDMALSDLEKFYRAAKKNYDEDKEFAQHARAYVVKLQAGDEYCR 225

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRK 384
             W  + D++    Q  Y RL+VTLT+    GES Y   +  ++  L+ KGL    +G  
Sbjct: 226 SMWRKLVDITMEQNQLSYQRLHVTLTKEDIMGESLYNSMLPGIIADLKTKGLAVESNGAT 285

Query: 385 IMW-GE--DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQV 439
           +++ GE  ++   PM ++  K DGG+ Y T+D+A  + R +   AD I+Y TD R  HQ 
Sbjct: 286 VVFVGEYKNKKGEPMGVIVQKEDGGYLYATTDIACAKYRYQTLGADRILYYTDSRQ-HQH 344

Query: 440 LQAIAEEEKKQGISSSSSSQTKG----TAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPE 495
           L  I +  ++ G    S             K   P + R      L+D+   A++ A   
Sbjct: 345 LTQIWQIARQAGYVPESMPLEHHMFGMMLDKTGKPFKSRTGENIKLADLLDEAIERAGKL 404

Query: 496 LGDKTASVASTNEKYV 511
           + +K   ++    K V
Sbjct: 405 IREKNPDISPQELKQV 420



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/362 (36%), Positives = 198/362 (54%), Gaps = 34/362 (9%)

Query: 1111 VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 1170
            + ++ + +A    G    + A   +    +FGD+Q N  M++ K+         P  +A 
Sbjct: 6    LLSNKINLAMIAAGASPDTDAQVRQSAKPQFGDYQANAVMSVAKVLNIP-----PRQLAD 60

Query: 1171 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQP 1224
             I   +         LA +  KIE+A PGF+N+FL R +   Q+  I+      +  V P
Sbjct: 61   KIVQRL--------DLAGIAQKIEIAGPGFINIFLDRQWLAAQVDHILKAPKLGLTPVIP 112

Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
             T      +++D+S+PNIAKEMHVGHLRSTIIGD  +R L  LGH+V+R NHVGDWGTQF
Sbjct: 113  QT------IVIDYSAPNIAKEMHVGHLRSTIIGDATARTLTLLGHNVIRANHVGDWGTQF 166

Query: 1285 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            GMLIA+L+ K          ++DL+ FY+ +KK +DED+ F + A   VV LQ  D   +
Sbjct: 167  GMLIAYLE-KMQRENADDMALSDLEKFYRAAKKNYDEDKEFAQHARAYVVKLQAGDEYCR 225

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
              W  + D++    Q  Y RL+VTLT+    GES Y   +  ++  L+ KGL    +G  
Sbjct: 226  SMWRKLVDITMEQNQLSYQRLHVTLTKEDIMGESLYNSMLPGIIADLKTKGLAVESNGAT 285

Query: 1402 IMW-GE--DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQV 1456
            +++ GE  ++   PM ++  K DGG+ Y T+D+A  + R +   AD I+Y TD R +  +
Sbjct: 286  VVFVGEYKNKKGEPMGVIVQKEDGGYLYATTDIACAKYRYQTLGADRILYYTDSRQHQHL 345

Query: 1457 LQ 1458
             Q
Sbjct: 346  TQ 347


>gi|298368627|ref|ZP_06979945.1| arginine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282630|gb|EFI24117.1| arginine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 572

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/561 (42%), Positives = 320/561 (57%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESTEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRSEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K F
Sbjct: 321  RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENAKAEFIGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   + +KN   EL   E ++  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVTEKN--PELGADEAAKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +   AA   P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAG----EWDAAA---PTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY  +T FS FY+ C  ++  AEG  +     
Sbjct: 491  QLATELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEACPILK--AEGATR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  D+L I
Sbjct: 546  RLQLAKLTGDTLKQGLDLLGI 566



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/416 (37%), Positives = 218/416 (52%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESTEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRSEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R RI   KAD ++YV DHR      Q      K   +  ++ ++  G    M     P +
Sbjct: 321 RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVTEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/319 (42%), Positives = 185/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESTEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRSEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R RI   KAD ++YV DHR
Sbjct: 321  RYRIGRLKADRLLYVVDHR 339


>gi|313668110|ref|YP_004048394.1| arginyl-tRNA synthetase [Neisseria lactamica 020-06]
 gi|313005572|emb|CBN87008.1| arginyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 572

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/563 (41%), Positives = 321/563 (57%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGVS--KTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +Y+ L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDAKAEFIGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGKWD-------ATAPTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  +EG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--SEGATR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLARNIQTALNDARFGVS--KTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +Y+ L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +   + ++  G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  219 bits (559), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGVS--KTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +Y+ L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|27363628|ref|NP_759156.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|31077005|sp|Q8DFR1.1|SYR_VIBVU RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|27359744|gb|AAO08683.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 577

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADPRLGVASEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELAEDEKKAIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++ +DL+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVSMDDLQ-----GEIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  242 bits (618), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/414 (35%), Positives = 222/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADPRLGVASEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202 DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R EE  AD ++Y  D R +  ++QA     K   +  S S +       +     P 
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPF 381

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPELG-DKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  D+  ++A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADL 435



 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADPRLGVASEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|225075056|ref|ZP_03718255.1| hypothetical protein NEIFLAOT_00055 [Neisseria flavescens
            NRL30031/H210]
 gi|224953540|gb|EEG34749.1| hypothetical protein NEIFLAOT_00055 [Neisseria flavescens
            NRL30031/H210]
          Length = 572

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/564 (41%), Positives = 321/564 (56%), Gaps = 43/564 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF
Sbjct: 35   FGDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGF 81

Query: 574  VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 630
            +N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82   INLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 631  DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 690
            D+ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K 
Sbjct: 140  DSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKV 197

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GE 747
            RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GE
Sbjct: 198  RFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGE 257

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDL 802
            S Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DL
Sbjct: 258  SKYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDL 317

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            A +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D 
Sbjct: 318  ACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDG 376

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            K FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS
Sbjct: 377  KPFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLS 434

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L   
Sbjct: 435  KNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVLTEP 487

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
             E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  +EG  +  
Sbjct: 488  LEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--SEGATR-- 543

Query: 1043 HTGRLLLAEATAKVMKKCFDILNI 1066
               RL LA+ T   +K+  ++L I
Sbjct: 544  -NSRLQLAKLTGDTLKQGLELLGI 566



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/419 (37%), Positives = 219/419 (52%), Gaps = 39/419 (9%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF
Sbjct: 35  FGDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGF 81

Query: 184 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           +N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82  INLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 300
           D+ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K 
Sbjct: 140 DSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKV 197

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GE 357
           RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GE
Sbjct: 198 RFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGE 257

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDL 412
           S Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DL
Sbjct: 258 SKYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDL 317

Query: 413 AAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NV 469
           A +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     
Sbjct: 318 ACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGK 377

Query: 470 PVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
           P + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 378 PFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  223 bits (569), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 188/322 (58%), Gaps = 28/322 (8%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF
Sbjct: 35   FGDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGF 81

Query: 1201 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            +N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82   INLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K 
Sbjct: 140  DSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKV 197

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GE 1374
            RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GE
Sbjct: 198  RFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGE 257

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDL 1429
            S Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DL
Sbjct: 258  SKYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDL 317

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            A +R R+    AD ++YV DHR
Sbjct: 318  ACLRYRVGTLHADRLLYVVDHR 339


>gi|385338324|ref|YP_005892197.1| arginyl-tRNA synthetase (arginine-tRNA ligase; ArgRS) [Neisseria
            meningitidis WUE 2594]
 gi|433475914|ref|ZP_20433251.1| arginine--tRNA ligase [Neisseria meningitidis 88050]
 gi|433505302|ref|ZP_20462240.1| arginine--tRNA ligase [Neisseria meningitidis 9506]
 gi|433513815|ref|ZP_20470603.1| arginine--tRNA ligase [Neisseria meningitidis 63049]
 gi|433516036|ref|ZP_20472802.1| arginine--tRNA ligase [Neisseria meningitidis 2004090]
 gi|433517888|ref|ZP_20474631.1| arginine--tRNA ligase [Neisseria meningitidis 96023]
 gi|433524593|ref|ZP_20481251.1| arginine--tRNA ligase [Neisseria meningitidis 97020]
 gi|433528565|ref|ZP_20485173.1| arginine--tRNA ligase [Neisseria meningitidis NM3652]
 gi|433530772|ref|ZP_20487356.1| arginine--tRNA ligase [Neisseria meningitidis NM3642]
 gi|433533038|ref|ZP_20489598.1| arginine--tRNA ligase [Neisseria meningitidis 2007056]
 gi|433534822|ref|ZP_20491358.1| arginine--tRNA ligase [Neisseria meningitidis 2001212]
 gi|319410738|emb|CBY91120.1| arginyl-tRNA synthetase (arginine-tRNA ligase; ArgRS) [Neisseria
            meningitidis WUE 2594]
 gi|432209023|gb|ELK64994.1| arginine--tRNA ligase [Neisseria meningitidis 88050]
 gi|432240594|gb|ELK96128.1| arginine--tRNA ligase [Neisseria meningitidis 9506]
 gi|432246462|gb|ELL01909.1| arginine--tRNA ligase [Neisseria meningitidis 63049]
 gi|432252362|gb|ELL07718.1| arginine--tRNA ligase [Neisseria meningitidis 2004090]
 gi|432252632|gb|ELL07984.1| arginine--tRNA ligase [Neisseria meningitidis 96023]
 gi|432258820|gb|ELL14101.1| arginine--tRNA ligase [Neisseria meningitidis 97020]
 gi|432264244|gb|ELL19448.1| arginine--tRNA ligase [Neisseria meningitidis NM3652]
 gi|432265582|gb|ELL20774.1| arginine--tRNA ligase [Neisseria meningitidis NM3642]
 gi|432265781|gb|ELL20972.1| arginine--tRNA ligase [Neisseria meningitidis 2007056]
 gi|432270572|gb|ELL25708.1| arginine--tRNA ligase [Neisseria meningitidis 2001212]
          Length = 572

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 239/563 (42%), Positives = 320/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEATKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 217/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+   +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEATKIGKTVGIGSIKYADLSKN 436



 Score =  221 bits (562), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|237807247|ref|YP_002891687.1| arginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237499508|gb|ACQ92101.1| arginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 580

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/550 (40%), Positives = 318/550 (57%), Gaps = 36/550 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K        KNP ++AQ I   + +        + ++ + E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PAGKNPRELAQLIIEHLPA--------STLVARAEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N FL   +  +QI+ I  +   +         +++D+S+PN+AKEM V H+RST+IGD +
Sbjct: 88   NFFLDSAWLAKQIEAIAASPKAEVKAAAPAQTIVLDYSAPNVAKEMAVHHIRSTVIGDAV 147

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            +R +E+LGH V+R NH+GDWGTQFGMLIA+L +K  +       ++DL+AFY+E+KK +D
Sbjct: 148  TRTMEFLGHHVIRANHIGDWGTQFGMLIAYL-EKVQNEQASELELSDLEAFYREAKKHYD 206

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            EDE+F +RA   VV LQ  D   +  W+ + D++    Q IYDRLNV+L+E+   GES Y
Sbjct: 207  EDEVFAERARGYVVKLQGGDEYCRAMWKKLVDITMAQNQIIYDRLNVSLSEKDVMGESLY 266

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 805
               +  +V  L+ KGL    +G  +++     G+D  ++ + I K DGGF Y T+D+A  
Sbjct: 267  NPMLRTVVEDLQAKGLAVESEGALVVYLDEIKGKDGEAMAVIIQKRDGGFLYATTDIACA 326

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            + R+E  KAD ++Y  D  Q  H +     A+KAG + P +  ++   FG++LG+D K F
Sbjct: 327  KYRVETLKADRVLYFIDSRQHQHLQQAWMIARKAGYV-PEQVSLEHHAFGMMLGKDGKPF 385

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTR+G TVKLSELLDE   R+   + +K+   +L   E ++   AVA G +KYADLS NR
Sbjct: 386  KTRTGGTVKLSELLDEAELRAGALIAEKS--ADLPEAEKAKVIHAVAMGAVKYADLSKNR 443

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY+F +D ML   GNTA YL YAYTRI SI R  G         AQ  PV +    E 
Sbjct: 444  TTDYIFDWDNMLTFEGNTAPYLQYAYTRIQSIFRRVGDE-------AQPGPVQITAPAEE 496

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA+ LL+ NDV+  V +    H LC YLY++S  F  FY+ C     + EG        
Sbjct: 497  TLAQKLLQFNDVVHNVAQKGMPHLLCTYLYELSGCFMSFYEACPI---NKEGVTAAEKGS 553

Query: 1046 RLLLAEATAK 1055
            RL L +ATAK
Sbjct: 554  RLTLCQATAK 563



 Score =  233 bits (594), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 127/327 (38%), Positives = 194/327 (59%), Gaps = 23/327 (7%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K        KNP ++AQ I   + +        + ++ + E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PAGKNPRELAQLIIEHLPA--------STLVARAEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N FL   +  +QI+ I  +   +         +++D+S+PN+AKEM V H+RST+IGD +
Sbjct: 88  NFFLDSAWLAKQIEAIAASPKAEVKAAAPAQTIVLDYSAPNVAKEMAVHHIRSTVIGDAV 147

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           +R +E+LGH V+R NH+GDWGTQFGMLIA+L +K  +       ++DL+AFY+E+KK +D
Sbjct: 148 TRTMEFLGHHVIRANHIGDWGTQFGMLIAYL-EKVQNEQASELELSDLEAFYREAKKHYD 206

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           EDE+F +RA   VV LQ  D   +  W+ + D++    Q IYDRLNV+L+E+   GES Y
Sbjct: 207 EDEVFAERARGYVVKLQGGDEYCRAMWKKLVDITMAQNQIIYDRLNVSLSEKDVMGESLY 266

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 415
              +  +V  L+ KGL    +G  +++     G+D  ++ + I K DGGF Y T+D+A  
Sbjct: 267 NPMLRTVVEDLQAKGLAVESEGALVVYLDEIKGKDGEAMAVIIQKRDGGFLYATTDIACA 326

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQA 442
           + R+E  KAD ++Y  D R +  + QA
Sbjct: 327 KYRVETLKADRVLYFIDSRQHQHLQQA 353



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/326 (39%), Positives = 194/326 (59%), Gaps = 24/326 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K        KNP ++AQ I   + +        + ++ + E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PAGKNPRELAQLIIEHLPA--------STLVARAEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N FL   +  +QI+ I  +   +         +++D+S+PN+AKEM V H+RST+IGD +
Sbjct: 88   NFFLDSAWLAKQIEAIAASPKAEVKAAAPAQTIVLDYSAPNVAKEMAVHHIRSTVIGDAV 147

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            +R +E+LGH V+R NH+GDWGTQFGMLIA+L +K  +       ++DL+AFY+E+KK +D
Sbjct: 148  TRTMEFLGHHVIRANHIGDWGTQFGMLIAYL-EKVQNEQASELELSDLEAFYREAKKHYD 206

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            EDE+F +RA   VV LQ  D   +  W+ + D++    Q IYDRLNV+L+E+   GES Y
Sbjct: 207  EDEVFAERARGYVVKLQGGDEYCRAMWKKLVDITMAQNQIIYDRLNVSLSEKDVMGESLY 266

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 1432
               +  +V  L+ KGL    +G  +++     G+D  ++ + I K DGGF Y T+D+A  
Sbjct: 267  NPMLRTVVEDLQAKGLAVESEGALVVYLDEIKGKDGEAMAVIIQKRDGGFLYATTDIACA 326

Query: 1433 RQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            + R+E  KAD ++Y  D R  HQ LQ
Sbjct: 327  KYRVETLKADRVLYFIDSRQ-HQHLQ 351


>gi|374704786|ref|ZP_09711656.1| arginyl-tRNA synthetase [Pseudomonas sp. S9]
          Length = 579

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/577 (39%), Positives = 330/577 (57%), Gaps = 53/577 (9%)

Query: 481  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            + D   H +Q A          PE    T  V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALTVLTADGVLPEGLTPTIQVENTKDK---SNGDFASNIAMMLAKPAGM 57

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            K     P D+A+ + +     L  +P     I+K+E+A PGF+N + +     ++++  +
Sbjct: 58   K-----PRDLAEKLVAA----LPADPQ----INKVEIAGPGFLNFYQNSAALAQRLEAAL 104

Query: 592  VNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
             +    P LN +      RV++D SSPN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R
Sbjct: 105  AD----PQLNVRKAGAAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDEVIR 160

Query: 647  LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 706
             NHVGDWGTQFGML+A++++  P+       ++DL+ FY+ +KKRFDE E F  RA + V
Sbjct: 161  QNHVGDWGTQFGMLLAYMEEN-PE--AAKSELSDLEVFYRAAKKRFDESEDFANRARELV 217

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEK 763
            V LQ  +P+  + W    ++S    QK YDRLNV LT    RGES Y   +  +V  L+ 
Sbjct: 218  VQLQAGEPECMRLWHRFNEISLSHCQKAYDRLNVKLTPADVRGESAYNDDLANIVADLQS 277

Query: 764  KGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 818
            KGLL   +G K ++       +   +P+ + K+ GG+ Y T+DLAA+R R +  KAD  +
Sbjct: 278  KGLLSESEGAKCVFLDEFKNAEGNPLPVIVQKAGGGYLYSTTDLAAMRYRSQTLKADRAL 337

Query: 819  YVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSEL 878
            Y  D  Q +HF++  E A++A  + P+  +++ +GFG + G D + FKTR G TVKL +L
Sbjct: 338  YFVDQRQALHFQMAFEVARRAEFVAPH-MQLEHMGFGTMNGADGRPFKTRDGGTVKLIDL 396

Query: 879  LDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            LDE   R+   +K KN   ++   EL     AV  G +KYADLS +R  DY F+F+ ML 
Sbjct: 397  LDEAEERAYQLVKAKN--PDIAEDELRTIAHAVGIGAVKYADLSKHRTSDYSFNFELMLS 454

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
              GNTA YLLYAYTR+AS+ R  G + +++     + P+ L+  +E  LA  L +  +VL
Sbjct: 455  FEGNTAPYLLYAYTRVASVLRKLGKSFDEI-----NGPLDLQAPQEIDLAGKLAQFGEVL 509

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDA 1035
              V      H LC YLYD++  FS FY++C  I  ++
Sbjct: 510  NSVADKGTPHILCSYLYDVAGLFSSFYEHCPIITAES 546



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/366 (38%), Positives = 206/366 (56%), Gaps = 45/366 (12%)

Query: 91  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           + D   H +Q A          PE    T  V +T +K     GDF  N AM L K    
Sbjct: 1   MKDSIRHLIQQALTVLTADGVLPEGLTPTIQVENTKDK---SNGDFASNIAMMLAKPAGM 57

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
           K     P D+A+ + +     L  +P     I+K+E+A PGF+N + +     ++++  +
Sbjct: 58  K-----PRDLAEKLVAA----LPADPQ----INKVEIAGPGFLNFYQNSAALAQRLEAAL 104

Query: 202 VNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
            +    P LN +      RV++D SSPN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R
Sbjct: 105 AD----PQLNVRKAGAAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDEVIR 160

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
            NHVGDWGTQFGML+A++++  P+       ++DL+ FY+ +KKRFDE E F  RA + V
Sbjct: 161 QNHVGDWGTQFGMLLAYMEEN-PE--AAKSELSDLEVFYRAAKKRFDESEDFANRARELV 217

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEK 373
           V LQ  +P+  + W    ++S    QK YDRLNV LT    RGES Y   +  +V  L+ 
Sbjct: 218 VQLQAGEPECMRLWHRFNEISLSHCQKAYDRLNVKLTPADVRGESAYNDDLANIVADLQS 277

Query: 374 KGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 428
           KGLL   +G K ++       +   +P+ + K+ GG+ Y T+DLAA+R R +  KAD  +
Sbjct: 278 KGLLSESEGAKCVFLDEFKNAEGNPLPVIVQKAGGGYLYSTTDLAAMRYRSQTLKADRAL 337

Query: 429 YVTDHR 434
           Y  D R
Sbjct: 338 YFVDQR 343



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/366 (38%), Positives = 206/366 (56%), Gaps = 45/366 (12%)

Query: 1108 LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            + D   H +Q A          PE    T  V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALTVLTADGVLPEGLTPTIQVENTKDK---SNGDFASNIAMMLAKPAGM 57

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            K     P D+A+ + +     L  +P     I+K+E+A PGF+N + +     ++++  +
Sbjct: 58   K-----PRDLAEKLVAA----LPADPQ----INKVEIAGPGFLNFYQNSAALAQRLEAAL 104

Query: 1219 VNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
             +    P LN +      RV++D SSPN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R
Sbjct: 105  AD----PQLNVRKAGAAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDEVIR 160

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
             NHVGDWGTQFGML+A++++  P+       ++DL+ FY+ +KKRFDE E F  RA + V
Sbjct: 161  QNHVGDWGTQFGMLLAYMEEN-PE--AAKSELSDLEVFYRAAKKRFDESEDFANRARELV 217

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEK 1390
            V LQ  +P+  + W    ++S    QK YDRLNV LT    RGES Y   +  +V  L+ 
Sbjct: 218  VQLQAGEPECMRLWHRFNEISLSHCQKAYDRLNVKLTPADVRGESAYNDDLANIVADLQS 277

Query: 1391 KGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 1445
            KGLL   +G K ++       +   +P+ + K+ GG+ Y T+DLAA+R R +  KAD  +
Sbjct: 278  KGLLSESEGAKCVFLDEFKNAEGNPLPVIVQKAGGGYLYSTTDLAAMRYRSQTLKADRAL 337

Query: 1446 YVTDHR 1451
            Y  D R
Sbjct: 338  YFVDQR 343


>gi|156103177|ref|XP_001617281.1| arginyl-tRNA synthetase [Plasmodium vivax Sal-1]
 gi|148806155|gb|EDL47554.1| arginyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 591

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 216/603 (35%), Positives = 344/603 (57%), Gaps = 43/603 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  VF H++Q  FP + ++   V   N K    FG FQCN+A+    IFK  G++ N  +
Sbjct: 11   IKQVFQHSIQKCFPSISEEVV-VTYANAK----FGHFQCNNAL---NIFKKYGKELN-VE 61

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR---------VYAGEQIK-DI 590
             AQ ++ ++   ++ N       ++I+ +  GF+ V LS+         +Y   QI   +
Sbjct: 62   NAQKLSQMIIENISEN-----FFEEIKSSPQGFITVKLSKEYIEKSLLKLYKNNQIDISV 116

Query: 591  IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
             ++ V+        RVLVDFSSPNIAKEMHVGHLRSTI+GD+I R+ E+L    +R+NH+
Sbjct: 117  DIDEVKGGNDGDYKRVLVDFSSPNIAKEMHVGHLRSTILGDSICRIFEFLKVQTIRVNHI 176

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGM+I H+    P++    P + +L + Y+E+KK +D D+ F+K +    + LQ
Sbjct: 177  GDWGTQFGMIINHIVSTHPNFKENMPELTNLTSLYQEAKKLYDADKEFEKSSKNYAIKLQ 236

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
              D D    W+ +C+ S+++F KIY  L++ L   GES Y   +   +  L+ + LL  +
Sbjct: 237  NNDEDCLFVWKKLCESSKKEFDKIYKILDIKLEYVGESHYISMISPALQMLKDEQLLS-N 295

Query: 771  DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
             G  I +  +  ++P+ + KS+GG+ YD++D+AAI  R++   +D ++YVTD GQ  HF 
Sbjct: 296  VGDAICYQSENFNVPLFLQKSNGGYGYDSTDVAAIHYRLKVLNSDCLIYVTDNGQLTHFE 355

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD-- 888
             + E AKKA   + N T++  VGFG+VL  D KKFKTRSG  +KL  L++EG  R+    
Sbjct: 356  TIFELAKKAKWASEN-TKLVHVGFGLVLNADNKKFKTRSGTNIKLINLINEGTERAKKDL 414

Query: 889  ----KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
                +LK +   T     ++ +  + +    IKY DL  +RN DY FS+D ML+ +GNT 
Sbjct: 415  LERIQLKSEEEKTYFKGIDIDQLSEELCVSAIKYFDLKQHRNTDYKFSYDNMLNVKGNTG 474

Query: 945  VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
            +Y++YAY+R+ SI R   ++ ++L        ++L    E  L   +L+  DV   V ++
Sbjct: 475  LYIIYAYSRMCSIFRKCSVDMDEL----SKDELNLVSPYEVNLGLHILKFPDVFYFVLKN 530

Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
            + +H L EY YD++T F+ FY+NC  +  + E   KT    RL+L      +++ C  +L
Sbjct: 531  MLIHKLAEYTYDLTTTFTAFYENCKVLNSENE---KT----RLILCAIAKSLLQICLGLL 583

Query: 1065 NIR 1067
             ++
Sbjct: 584  GMK 586



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 128/353 (36%), Positives = 207/353 (58%), Gaps = 25/353 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  VF H++Q  FP + ++   V   N K    FG FQCN+A+    IFK  G++ N  +
Sbjct: 11  IKQVFQHSIQKCFPSISEEVV-VTYANAK----FGHFQCNNAL---NIFKKYGKELN-VE 61

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR---------VYAGEQIK-DI 200
            AQ ++ ++   ++ N       ++I+ +  GF+ V LS+         +Y   QI   +
Sbjct: 62  NAQKLSQMIIENISEN-----FFEEIKSSPQGFITVKLSKEYIEKSLLKLYKNNQIDISV 116

Query: 201 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
            ++ V+        RVLVDFSSPNIAKEMHVGHLRSTI+GD+I R+ E+L    +R+NH+
Sbjct: 117 DIDEVKGGNDGDYKRVLVDFSSPNIAKEMHVGHLRSTILGDSICRIFEFLKVQTIRVNHI 176

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGM+I H+    P++    P + +L + Y+E+KK +D D+ F+K +    + LQ
Sbjct: 177 GDWGTQFGMIINHIVSTHPNFKENMPELTNLTSLYQEAKKLYDADKEFEKSSKNYAIKLQ 236

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
             D D    W+ +C+ S+++F KIY  L++ L   GES Y   +   +  L+ + LL  +
Sbjct: 237 NNDEDCLFVWKKLCESSKKEFDKIYKILDIKLEYVGESHYISMISPALQMLKDEQLLS-N 295

Query: 381 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            G  I +  +  ++P+ + KS+GG+ YD++D+AAI  R++   +D ++YVTD+
Sbjct: 296 VGDAICYQSENFNVPLFLQKSNGGYGYDSTDVAAIHYRLKVLNSDCLIYVTDN 348



 Score =  233 bits (593), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 128/353 (36%), Positives = 207/353 (58%), Gaps = 25/353 (7%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  VF H++Q  FP + ++   V   N K    FG FQCN+A+    IFK  G++ N  +
Sbjct: 11   IKQVFQHSIQKCFPSISEEVV-VTYANAK----FGHFQCNNAL---NIFKKYGKELN-VE 61

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR---------VYAGEQIK-DI 1217
             AQ ++ ++   ++ N       ++I+ +  GF+ V LS+         +Y   QI   +
Sbjct: 62   NAQKLSQMIIENISEN-----FFEEIKSSPQGFITVKLSKEYIEKSLLKLYKNNQIDISV 116

Query: 1218 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
             ++ V+        RVLVDFSSPNIAKEMHVGHLRSTI+GD+I R+ E+L    +R+NH+
Sbjct: 117  DIDEVKGGNDGDYKRVLVDFSSPNIAKEMHVGHLRSTILGDSICRIFEFLKVQTIRVNHI 176

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGM+I H+    P++    P + +L + Y+E+KK +D D+ F+K +    + LQ
Sbjct: 177  GDWGTQFGMIINHIVSTHPNFKENMPELTNLTSLYQEAKKLYDADKEFEKSSKNYAIKLQ 236

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
              D D    W+ +C+ S+++F KIY  L++ L   GES Y   +   +  L+ + LL  +
Sbjct: 237  NNDEDCLFVWKKLCESSKKEFDKIYKILDIKLEYVGESHYISMISPALQMLKDEQLLS-N 295

Query: 1398 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             G  I +  +  ++P+ + KS+GG+ YD++D+AAI  R++   +D ++YVTD+
Sbjct: 296  VGDAICYQSENFNVPLFLQKSNGGYGYDSTDVAAIHYRLKVLNSDCLIYVTDN 348


>gi|152998130|ref|YP_001342965.1| arginyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189083538|sp|A6W2V1.1|SYR_MARMS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|150839054|gb|ABR73030.1| arginyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 577

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/602 (37%), Positives = 337/602 (55%), Gaps = 45/602 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  +    +Q A    G    + A   +    +FGD+Q N  M   K  K      NP D
Sbjct: 3    IQTLLNQRIQAAMVAAGASDTAQALVRQSAKVQFGDYQANGIMGAAKALK-----MNPCD 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNG 594
             AQ+    +         L+ + +K+E+A PGF+N+FL  V+  +++  +       VN 
Sbjct: 58   FAQATLDKL--------DLSDLAEKVEIAGPGFINIFLKNVWLSKELTQLRTSERLDVNP 109

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
            V  P       V+VD+SSPN+AKEMHVGHLRST+IGD + R LE+ GH VVR NHVGDWG
Sbjct: 110  VDAPE-----TVVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFFGHHVVRQNHVGDWG 164

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGML+A+++    +  T S  ++DL+ FY+ +K  FDEDE F  R+ + VVALQ  D 
Sbjct: 165  TQFGMLLAYMERLRSENATISMALSDLETFYRAAKTCFDEDEAFATRSRELVVALQSGDE 224

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
            +    W+   ++S    ++ Y  L V+L  +    ES Y   +  +V  L+++GLL+  +
Sbjct: 225  ECLALWDEFINISLTHCEETYKMLGVSLERQHVMPESAYNDDLANVVNELKEQGLLQESN 284

Query: 772  GRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G + ++ E+     G I P+ + K+ GGF Y T+DLAA+R R     A+ ++Y  D  Q 
Sbjct: 285  GAQCVFMEEFANKEGEITPIIVQKTGGGFLYATTDLAAVRFRQHTLNANRVLYFVDARQS 344

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
            +HF+ +   ++KAG + P +T+++ + FG V+G D K FKTRSG   KLS LL+E   R+
Sbjct: 345  LHFQQIFTLSRKAGFVKP-ETQLEHMPFGTVMGSDGKPFKTRSGGVAKLSSLLEEAQERA 403

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               +  KN   E+   EL    + V    +KYADLS NR  DYVF++D ML   GNTA Y
Sbjct: 404  YQLVASKN--PEMDEEELRNIGRVVGIASVKYADLSKNRTSDYVFNWDSMLSFEGNTAPY 461

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            LLYAY+R+ASI + + I+  +L     +  +S++  +E ALA  L +  + +  V  D  
Sbjct: 462  LLYAYSRVASIVKRSEIDVVNL-----TGEISIDEPQERALAVKLCQFEEAIQQVANDGM 516

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H LC YLYD++  F  FY+ C  +  +AE ++K  H+ RL LA  TA  +K    +L I
Sbjct: 517  PHFLCAYLYDLAGTFMTFYEACPIL--NAEDEVK--HS-RLQLALNTASTLKLGLSLLGI 571

Query: 1067 RT 1068
             T
Sbjct: 572  ET 573



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 204/377 (54%), Gaps = 35/377 (9%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  +    +Q A    G    + A   +    +FGD+Q N  M   K  K      NP D
Sbjct: 3   IQTLLNQRIQAAMVAAGASDTAQALVRQSAKVQFGDYQANGIMGAAKALK-----MNPCD 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNG 204
            AQ+    +         L+ + +K+E+A PGF+N+FL  V+  +++  +       VN 
Sbjct: 58  FAQATLDKL--------DLSDLAEKVEIAGPGFINIFLKNVWLSKELTQLRTSERLDVNP 109

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
           V  P       V+VD+SSPN+AKEMHVGHLRST+IGD + R LE+ GH VVR NHVGDWG
Sbjct: 110 VDAPE-----TVVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFFGHHVVRQNHVGDWG 164

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGML+A+++    +  T S  ++DL+ FY+ +K  FDEDE F  R+ + VVALQ  D 
Sbjct: 165 TQFGMLLAYMERLRSENATISMALSDLETFYRAAKTCFDEDEAFATRSRELVVALQSGDE 224

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
           +    W+   ++S    ++ Y  L V+L  +    ES Y   +  +V  L+++GLL+  +
Sbjct: 225 ECLALWDEFINISLTHCEETYKMLGVSLERQHVMPESAYNDDLANVVNELKEQGLLQESN 284

Query: 382 GRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR-S 435
           G + ++ E+     G I P+ + K+ GGF Y T+DLAA+R R     A+ ++Y  D R S
Sbjct: 285 GAQCVFMEEFANKEGEITPIIVQKTGGGFLYATTDLAAVRFRQHTLNANRVLYFVDARQS 344

Query: 436 YHQVLQAIAEEEKKQGI 452
            H   Q I    +K G 
Sbjct: 345 LH--FQQIFTLSRKAGF 359



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/358 (36%), Positives = 197/358 (55%), Gaps = 32/358 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  +    +Q A    G    + A   +    +FGD+Q N  M   K  K      NP D
Sbjct: 3    IQTLLNQRIQAAMVAAGASDTAQALVRQSAKVQFGDYQANGIMGAAKALK-----MNPCD 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNG 1221
             AQ+    +         L+ + +K+E+A PGF+N+FL  V+  +++  +       VN 
Sbjct: 58   FAQATLDKL--------DLSDLAEKVEIAGPGFINIFLKNVWLSKELTQLRTSERLDVNP 109

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
            V  P       V+VD+SSPN+AKEMHVGHLRST+IGD + R LE+ GH VVR NHVGDWG
Sbjct: 110  VDAPE-----TVVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFFGHHVVRQNHVGDWG 164

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGML+A+++    +  T S  ++DL+ FY+ +K  FDEDE F  R+ + VVALQ  D 
Sbjct: 165  TQFGMLLAYMERLRSENATISMALSDLETFYRAAKTCFDEDEAFATRSRELVVALQSGDE 224

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
            +    W+   ++S    ++ Y  L V+L  +    ES Y   +  +V  L+++GLL+  +
Sbjct: 225  ECLALWDEFINISLTHCEETYKMLGVSLERQHVMPESAYNDDLANVVNELKEQGLLQESN 284

Query: 1399 GRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            G + ++ E+     G I P+ + K+ GGF Y T+DLAA+R R     A+ ++Y  D R
Sbjct: 285  GAQCVFMEEFANKEGEITPIIVQKTGGGFLYATTDLAAVRFRQHTLNANRVLYFVDAR 342


>gi|339492661|ref|YP_004712954.1| arginyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
 gi|338800033|gb|AEJ03865.1| arginyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
          Length = 579

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 340/597 (56%), Gaps = 49/597 (8%)

Query: 481  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTSEGVLPEGLTPAIQVENTKDK---SHGDFASNIAMMLAKPAGM 57

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            K     P ++A+ +       +A  P  A+ I K+E+A PGF+N F +     ++++  +
Sbjct: 58   K-----PRELAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAQRLETAL 104

Query: 592  VNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
             +  +     + K RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R NHV
Sbjct: 105  ADAQLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIRQNHV 164

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFDE   F  RA + VV LQ
Sbjct: 165  GDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFDESPEFADRARELVVKLQ 221

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 767
              D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L +KGLL
Sbjct: 222  AGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNADLADIVEALREKGLL 281

Query: 768  ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R ++  AD ++Y  D
Sbjct: 282  TEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVD 341

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q +HF++  E A++AG ++    +++ +GFG + G D + FKTR G TVKL +LLDE 
Sbjct: 342  QRQALHFQMAFEVARRAGFVHEG-MQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEA 400

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
             +R+   +K KN   EL   EL +  +AV    +KYADLS +R  DY F+F+ ML   GN
Sbjct: 401  EQRAYALVKGKN--PELDEAELRQIARAVGISAVKYADLSKHRTSDYRFNFELMLSFEGN 458

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA YLLYAYTR+AS+ R  G   +++     S  + L+ E+E ALA  L +  +VL  V 
Sbjct: 459  TAPYLLYAYTRVASVFRKLGKGIDEI-----SGHIQLDAEQELALAAKLAQFGEVLNSVG 513

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
                 H LC YLYD++  FS FY++C  +  + + + ++    RL LA  T + +K+
Sbjct: 514  EKGEPHLLCAYLYDLAGLFSSFYEHCPILSAEQDAQKQS----RLRLAALTGRTLKQ 566



 Score =  230 bits (586), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 141/362 (38%), Positives = 202/362 (55%), Gaps = 37/362 (10%)

Query: 91  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1   MKDSIRHLIQQALVRLTSEGVLPEGLTPAIQVENTKDK---SHGDFASNIAMMLAKPAGM 57

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
           K     P ++A+ +       +A  P  A+ I K+E+A PGF+N F +     ++++  +
Sbjct: 58  K-----PRELAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAQRLETAL 104

Query: 202 VNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
            +  +     + K RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R NHV
Sbjct: 105 ADAQLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIRQNHV 164

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFDE   F  RA + VV LQ
Sbjct: 165 GDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFDESPEFADRARELVVKLQ 221

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 377
             D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L +KGLL
Sbjct: 222 AGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNADLADIVEALREKGLL 281

Query: 378 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R ++  AD ++Y  D
Sbjct: 282 TEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVD 341

Query: 433 HR 434
            R
Sbjct: 342 QR 343



 Score =  230 bits (586), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 141/362 (38%), Positives = 202/362 (55%), Gaps = 37/362 (10%)

Query: 1108 LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTSEGVLPEGLTPAIQVENTKDK---SHGDFASNIAMMLAKPAGM 57

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            K     P ++A+ +       +A  P  A+ I K+E+A PGF+N F +     ++++  +
Sbjct: 58   K-----PRELAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAQRLETAL 104

Query: 1219 VNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
             +  +     + K RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R NHV
Sbjct: 105  ADAQLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIRQNHV 164

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFDE   F  RA + VV LQ
Sbjct: 165  GDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFDESPEFADRARELVVKLQ 221

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 1394
              D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L +KGLL
Sbjct: 222  AGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNADLADIVEALREKGLL 281

Query: 1395 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R ++  AD ++Y  D
Sbjct: 282  TEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVD 341

Query: 1450 HR 1451
             R
Sbjct: 342  QR 343


>gi|395232294|ref|ZP_10410545.1| arginyl-tRNA ligase [Enterobacter sp. Ag1]
 gi|394733280|gb|EJF32908.1| arginyl-tRNA ligase [Enterobacter sp. Ag1]
          Length = 577

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/564 (38%), Positives = 322/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M++ K          P  +A+ + +        N  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMSVAKTLG-----MPPRQVAEKVIA--------NLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  + I + + +     ++++   ++VD+S+PN+AKEMHVGH+RSTIIGD 
Sbjct: 82   FINIFLDPAFLAKNIDEAVASDRVGVSVSEPQTIVVDYSAPNVAKEMHVGHIRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+ +KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQQENAGEM-ALADLEEFYRAAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE+F +RA   VV LQ  D   ++ W  + D++    QK Y+RLNVTLT     GES 
Sbjct: 201  DEDEVFAERARGYVVKLQGGDEYCREMWRKLVDITMTQNQKTYERLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L++KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 261  YNPMLPGIVADLKEKGLAVESEGATVVFLDEFKNKDGDPMGVIIQKKDGGYLYTTTDIAC 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 321  AKYRYETLHADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVTLEHQMFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSG TVKL++LLDE + R+   +  KN   ++   EL    +AV  G +KYADLS +
Sbjct: 380  FKTRSGGTVKLTDLLDEAMERARGLVAAKN--PDMPADELENLAKAVGIGAVKYADLSKS 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A ++  +L  A     V +  ++E
Sbjct: 438  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADLDEAELLKA----KVVITEDRE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +    E        
Sbjct: 494  AQLAARLLQFEETLNVVARDGTPHVMCAYLYDVAGLFSGFYEHCPILSAADEA----TRN 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K   D L I T
Sbjct: 550  SRLKLALLTAKTLKLGLDTLGINT 573



 Score =  236 bits (601), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 125/328 (38%), Positives = 194/328 (59%), Gaps = 22/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M++ K          P  +A+ + +        N  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGVMSVAKTLG-----MPPRQVAEKVIA--------NLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  + I + + +     ++++   ++VD+S+PN+AKEMHVGH+RSTIIGD 
Sbjct: 82  FINIFLDPAFLAKNIDEAVASDRVGVSVSEPQTIVVDYSAPNVAKEMHVGHIRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+ +KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQQENAGEM-ALADLEEFYRAAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE+F +RA   VV LQ  D   ++ W  + D++    QK Y+RLNVTLT     GES 
Sbjct: 201 DEDEVFAERARGYVVKLQGGDEYCREMWRKLVDITMTQNQKTYERLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L++KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 261 YNPMLPGIVADLKEKGLAVESEGATVVFLDEFKNKDGDPMGVIIQKKDGGYLYTTTDIAC 320

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 321 AKYRYETLHADRVLYFIDSRQHQHLMQA 348



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/327 (37%), Positives = 193/327 (59%), Gaps = 22/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M++ K          P  +A+ + +        N  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMSVAKTLG-----MPPRQVAEKVIA--------NLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  + I + + +     ++++   ++VD+S+PN+AKEMHVGH+RSTIIGD 
Sbjct: 82   FINIFLDPAFLAKNIDEAVASDRVGVSVSEPQTIVVDYSAPNVAKEMHVGHIRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+ +KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQQENAGEM-ALADLEEFYRAAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE+F +RA   VV LQ  D   ++ W  + D++    QK Y+RLNVTLT     GES 
Sbjct: 201  DEDEVFAERARGYVVKLQGGDEYCREMWRKLVDITMTQNQKTYERLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L++KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A 
Sbjct: 261  YNPMLPGIVADLKEKGLAVESEGATVVFLDEFKNKDGDPMGVIIQKKDGGYLYTTTDIAC 320

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 321  AKYRYETLHADRVLYFIDSRQHQHLMQ 347


>gi|121635178|ref|YP_975423.1| arginyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|433469688|ref|ZP_20427103.1| arginine--tRNA ligase [Neisseria meningitidis 98080]
 gi|433495022|ref|ZP_20452088.1| arginine--tRNA ligase [Neisseria meningitidis NM762]
 gi|433526471|ref|ZP_20483100.1| arginine--tRNA ligase [Neisseria meningitidis 69096]
 gi|433539277|ref|ZP_20495751.1| arginine--tRNA ligase [Neisseria meningitidis 70030]
 gi|166232814|sp|A1KUU4.1|SYR_NEIMF RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|120866884|emb|CAM10643.1| arginyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|254673245|emb|CBA08256.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|432202455|gb|ELK58518.1| arginine--tRNA ligase [Neisseria meningitidis 98080]
 gi|432229410|gb|ELK85098.1| arginine--tRNA ligase [Neisseria meningitidis NM762]
 gi|432260231|gb|ELL15491.1| arginine--tRNA ligase [Neisseria meningitidis 69096]
 gi|432272769|gb|ELL27875.1| arginine--tRNA ligase [Neisseria meningitidis 70030]
          Length = 572

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 320/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    D        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAD-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  +VL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  221 bits (562), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|444375953|ref|ZP_21175203.1| Arginyl-tRNA synthetase [Enterovibrio sp. AK16]
 gi|443679885|gb|ELT86535.1| Arginyl-tRNA synthetase [Enterovibrio sp. AK16]
          Length = 576

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/576 (38%), Positives = 330/576 (57%), Gaps = 34/576 (5%)

Query: 501  ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 560
             S A+  +    +FGD+Q N  M + K         NP + AQ +  V+         L 
Sbjct: 23   GSPAAVRQSAKPQFGDYQANGIMGVAKKLG-----CNPREFAQKVLDVL--------DLD 69

Query: 561  KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
             + +K E+A PGF+N+FLS  +   +  + + +        +K  ++VD+S+PN+AKEMH
Sbjct: 70   GMAEKTEIAGPGFINIFLSTEWLAAKADEALASDRLGVAEAEKQNIVVDYSAPNVAKEMH 129

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
            VGHLRSTIIGD + R LE++GH+V+R NH+GDWGTQFGMLIA+L+         S  ++D
Sbjct: 130  VGHLRSTIIGDAVVRTLEFMGHNVIRANHLGDWGTQFGMLIANLERHEAQGGDISMDLSD 189

Query: 681  LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 740
            ++ FY+ESKK +DEDE F K A   VV LQ  D   K+ W+ +  ++    Q+ YDRLNV
Sbjct: 190  IEGFYRESKKLYDEDEEFAKTARNYVVRLQSGDEYCKEKWQQLVKITLEQNQRNYDRLNV 249

Query: 741  TLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSD 792
            +LT++   GES Y   +  +V  L+ +GL   DDG  +++ E   ++   PM ++  K D
Sbjct: 250  SLTDKDVMGESMYNSMLAGIVEDLKAQGLAVEDDGAMVVFLEEYKNKDGEPMGVIIQKRD 309

Query: 793  GGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFV 852
            GGF Y T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++  
Sbjct: 310  GGFLYTTTDIACAKYRYETFNADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESMSLEHH 368

Query: 853  GFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVA 912
             FG++LG+D K FKTR+G TV+L++LLDE   R+   +++KN   EL+  E       VA
Sbjct: 369  AFGMMLGKDGKPFKTRAGGTVRLADLLDEAEVRAKKLIEEKN--PELSAEEKDNIANTVA 426

Query: 913  YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
               +KYADLS +R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AGI++  +    
Sbjct: 427  MAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFNKAGIDANSIE--- 483

Query: 973  QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
                + +  EKE AL   LL+  + +  V R+   H +C YL+D++  FS FY+ C  + 
Sbjct: 484  --GQIIVSEEKEKALVCKLLQFEEAVDGVAREGQPHIMCSYLFDLAGTFSSFYEACPIL- 540

Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             +AEG+ K     R+ LA  T++ +K+  D+L I T
Sbjct: 541  -NAEGETK---QSRMKLAALTSRTIKQGLDLLGINT 572



 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/340 (38%), Positives = 198/340 (58%), Gaps = 21/340 (6%)

Query: 111 ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 170
            S A+  +    +FGD+Q N  M + K         NP + AQ +  V+         L 
Sbjct: 23  GSPAAVRQSAKPQFGDYQANGIMGVAKKLG-----CNPREFAQKVLDVL--------DLD 69

Query: 171 KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 230
            + +K E+A PGF+N+FLS  +   +  + + +        +K  ++VD+S+PN+AKEMH
Sbjct: 70  GMAEKTEIAGPGFINIFLSTEWLAAKADEALASDRLGVAEAEKQNIVVDYSAPNVAKEMH 129

Query: 231 VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 290
           VGHLRSTIIGD + R LE++GH+V+R NH+GDWGTQFGMLIA+L+         S  ++D
Sbjct: 130 VGHLRSTIIGDAVVRTLEFMGHNVIRANHLGDWGTQFGMLIANLERHEAQGGDISMDLSD 189

Query: 291 LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 350
           ++ FY+ESKK +DEDE F K A   VV LQ  D   K+ W+ +  ++    Q+ YDRLNV
Sbjct: 190 IEGFYRESKKLYDEDEEFAKTARNYVVRLQSGDEYCKEKWQQLVKITLEQNQRNYDRLNV 249

Query: 351 TLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSD 402
           +LT++   GES Y   +  +V  L+ +GL   DDG  +++ E   ++   PM ++  K D
Sbjct: 250 SLTDKDVMGESMYNSMLAGIVEDLKAQGLAVEDDGAMVVFLEEYKNKDGEPMGVIIQKRD 309

Query: 403 GGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           GGF Y T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 310 GGFLYTTTDIACAKYRYETFNADRVLYFIDSRQHQHLMQA 349



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 197/339 (58%), Gaps = 21/339 (6%)

Query: 1128 ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 1187
             S A+  +    +FGD+Q N  M + K         NP + AQ +  V+         L 
Sbjct: 23   GSPAAVRQSAKPQFGDYQANGIMGVAKKLG-----CNPREFAQKVLDVL--------DLD 69

Query: 1188 KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 1247
             + +K E+A PGF+N+FLS  +   +  + + +        +K  ++VD+S+PN+AKEMH
Sbjct: 70   GMAEKTEIAGPGFINIFLSTEWLAAKADEALASDRLGVAEAEKQNIVVDYSAPNVAKEMH 129

Query: 1248 VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 1307
            VGHLRSTIIGD + R LE++GH+V+R NH+GDWGTQFGMLIA+L+         S  ++D
Sbjct: 130  VGHLRSTIIGDAVVRTLEFMGHNVIRANHLGDWGTQFGMLIANLERHEAQGGDISMDLSD 189

Query: 1308 LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 1367
            ++ FY+ESKK +DEDE F K A   VV LQ  D   K+ W+ +  ++    Q+ YDRLNV
Sbjct: 190  IEGFYRESKKLYDEDEEFAKTARNYVVRLQSGDEYCKEKWQQLVKITLEQNQRNYDRLNV 249

Query: 1368 TLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSD 1419
            +LT++   GES Y   +  +V  L+ +GL   DDG  +++ E   ++   PM ++  K D
Sbjct: 250  SLTDKDVMGESMYNSMLAGIVEDLKAQGLAVEDDGAMVVFLEEYKNKDGEPMGVIIQKRD 309

Query: 1420 GGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            GGF Y T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 310  GGFLYTTTDIACAKYRYETFNADRVLYFIDSRQHQHLMQ 348


>gi|429744683|ref|ZP_19278152.1| arginine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
 gi|429162237|gb|EKY04574.1| arginine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
          Length = 572

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 326/564 (57%), Gaps = 43/564 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+Q N  M   K       K+NP ++AQ +A  ++           VI+  +VA PGF
Sbjct: 35   FGDYQINGVMGAAK-----QAKQNPRELAQKVADALSGN--------AVIESAQVAGPGF 81

Query: 574  VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 630
            +N+ L   +    ++  + +   GV      +   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82   INLCLKPDFLARHVQTALNDPRCGVAKKAAPQT--VVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 631  DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 690
            D+ISR+LE++G  V+R NHVGDWGTQFGML+A++ ++  D    +  ++DL+ FY+ +K 
Sbjct: 140  DSISRVLEFMGDSVIRQNHVGDWGTQFGMLVAYMVEQQKD--NAAFELSDLEQFYRSAKV 197

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDED  F   A + VV LQ  D +  K W+   D+S    Q +YD L + LT     GE
Sbjct: 198  RFDEDAAFADTAREYVVKLQGGDENVLKLWQQFVDISLGHAQAVYDTLGLKLTPADVAGE 257

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDL 802
            S Y   ++  V  L ++GL   DDG K+++ ++     G     IV K  GGF Y ++DL
Sbjct: 258  SKYNPELQNTVDDLVRQGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDL 317

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            A +R R+    AD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D 
Sbjct: 318  ACLRYRVGTLHADRLLYVVDHRQSLHFEQLFTTSRKAGYL-PENVKAEFIGFGTMMGKDG 376

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTRSGDTVKL +LLDE + R+   +K+KN   +L   + ++  Q V  G +KYADLS
Sbjct: 377  RPFKTRSGDTVKLVDLLDEAVERAAALVKEKN--PDLGADDAAKIAQTVGIGAVKYADLS 434

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             NR  DYVF +D ML   GNTA YL YAYTR+ S+ R A    +D   AA+   ++L   
Sbjct: 435  KNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKA----DDWDAAAE---LTLAEP 487

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
             E  LA  LL+  D+L  V      H+L  YLY ++T FS FY+ C  ++  AEG  +  
Sbjct: 488  AEKQLAVELLKFEDILQNVADTGYPHYLAAYLYQLATLFSRFYEACPILK--AEGATR-- 543

Query: 1043 HTGRLLLAEATAKVMKKCFDILNI 1066
               RL LA  T  V+K+  D+L I
Sbjct: 544  -NSRLQLARLTGNVLKQGLDLLGI 566



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 217/419 (51%), Gaps = 39/419 (9%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+Q N  M   K       K+NP ++AQ +A  ++           VI+  +VA PGF
Sbjct: 35  FGDYQINGVMGAAK-----QAKQNPRELAQKVADALSGN--------AVIESAQVAGPGF 81

Query: 184 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 240
           +N+ L   +    ++  + +   GV      +   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82  INLCLKPDFLARHVQTALNDPRCGVAKKAAPQT--VVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 300
           D+ISR+LE++G  V+R NHVGDWGTQFGML+A++ ++  D    +  ++DL+ FY+ +K 
Sbjct: 140 DSISRVLEFMGDSVIRQNHVGDWGTQFGMLVAYMVEQQKD--NAAFELSDLEQFYRSAKV 197

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDED  F   A + VV LQ  D +  K W+   D+S    Q +YD L + LT     GE
Sbjct: 198 RFDEDAAFADTAREYVVKLQGGDENVLKLWQQFVDISLGHAQAVYDTLGLKLTPADVAGE 257

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDL 412
           S Y   ++  V  L ++GL   DDG K+++ ++     G     IV K  GGF Y ++DL
Sbjct: 258 SKYNPELQNTVDDLVRQGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDL 317

Query: 413 AAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV--- 469
           A +R R+    AD ++YV DHR      Q      K   +  +  ++  G    M     
Sbjct: 318 ACLRYRVGTLHADRLLYVVDHRQSLHFEQLFTTSRKAGYLPENVKAEFIGFGTMMGKDGR 377

Query: 470 PVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
           P + R      L D+   AV+ A        P+LG D  A +A T      K+ D   N
Sbjct: 378 PFKTRSGDTVKLVDLLDEAVERAAALVKEKNPDLGADDAAKIAQTVGIGAVKYADLSKN 436



 Score =  219 bits (558), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 186/322 (57%), Gaps = 28/322 (8%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGD+Q N  M   K       K+NP ++AQ +A  ++           VI+  +VA PGF
Sbjct: 35   FGDYQINGVMGAAK-----QAKQNPRELAQKVADALSGN--------AVIESAQVAGPGF 81

Query: 1201 VNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            +N+ L   +    ++  + +   GV      +   V++D+SSPN+AKEMHVGHLRS+IIG
Sbjct: 82   INLCLKPDFLARHVQTALNDPRCGVAKKAAPQT--VVIDYSSPNLAKEMHVGHLRSSIIG 139

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D+ISR+LE++G  V+R NHVGDWGTQFGML+A++ ++  D    +  ++DL+ FY+ +K 
Sbjct: 140  DSISRVLEFMGDSVIRQNHVGDWGTQFGMLVAYMVEQQKD--NAAFELSDLEQFYRSAKV 197

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDED  F   A + VV LQ  D +  K W+   D+S    Q +YD L + LT     GE
Sbjct: 198  RFDEDAAFADTAREYVVKLQGGDENVLKLWQQFVDISLGHAQAVYDTLGLKLTPADVAGE 257

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDL 1429
            S Y   ++  V  L ++GL   DDG K+++ ++     G     IV K  GGF Y ++DL
Sbjct: 258  SKYNPELQNTVDDLVRQGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDL 317

Query: 1430 AAIRQRIEEEKADWIVYVTDHR 1451
            A +R R+    AD ++YV DHR
Sbjct: 318  ACLRYRVGTLHADRLLYVVDHR 339


>gi|300717101|ref|YP_003741904.1| arginyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062937|emb|CAX60057.1| Arginyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 576

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/567 (39%), Positives = 325/567 (57%), Gaps = 40/567 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+        E+  +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----MAPRQLAE--------EVLKHLDLTGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL + +   Q+  +      GV P        V++D+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINLFLDKQWLSAQVDAVTAAPRLGVAPVAPQT---VVIDYSAPNVAKEMHVGHVRSTII 138

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  ++  +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNEH-HEEHALADLEVFYREAK 197

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            + +DED  F +RA   VV LQ  D   +  W+ + D++    Q IYDR+NVTL+ +   G
Sbjct: 198  RTYDEDPAFAERARGYVVKLQGGDEYCRTMWKKLVDITMAQNQIIYDRMNVTLSRKDVMG 257

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L  KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNDMLPGIVADLTAKGLAVQSEGATVVFLDEYKNKDGDPMGVIIKKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E  KAD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLKADRVLYYIDCRQHQHLMQAWTIVRKAGYV-PESVPLEHHAFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G T+KLS+LLDE + R+   + +KN   ++   EL     +V  G IKYADL
Sbjct: 377  GKPFKTRAGGTIKLSDLLDEAVERATKLVGEKN--PDMPADELKALANSVGIGAIKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI+   +   AQ     +  
Sbjct: 435  SKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDETGVTGNAQ-----IVE 489

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E ALA  LL+  + +  V RD   H +C YLYD++  FS FY++C  +  D E   ++
Sbjct: 490  DREAALAVRLLQFEETITQVARDGTPHVMCAYLYDLAGLFSGFYEHCPILTADDEATKQS 549

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA  TAK +K+  D L I T
Sbjct: 550  ----RLKLALLTAKTLKQGLDTLGIDT 572



 Score =  231 bits (590), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/391 (35%), Positives = 213/391 (54%), Gaps = 31/391 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+        E+  +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMAVAKKLG-----MAPRQLAE--------EVLKHLDLTGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL + +   Q+  +      GV P        V++D+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINLFLDKQWLSAQVDAVTAAPRLGVAPVAPQT---VVIDYSAPNVAKEMHVGHVRSTII 138

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  ++  +   +ADL+ FY+E+K
Sbjct: 139 GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNEH-HEEHALADLEVFYREAK 197

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           + +DED  F +RA   VV LQ  D   +  W+ + D++    Q IYDR+NVTL+ +   G
Sbjct: 198 RTYDEDPAFAERARGYVVKLQGGDEYCRTMWKKLVDITMAQNQIIYDRMNVTLSRKDVMG 257

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L  KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258 ESLYNDMLPGIVADLTAKGLAVQSEGATVVFLDEYKNKDGDPMGVIIKKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---N 468
           +A  + R E  KAD ++Y  D R +  ++QA     K   +  S   +       +    
Sbjct: 318 IACAKYRYETLKADRVLYYIDCRQHQHLMQAWTIVRKAGYVPESVPLEHHAFGMMLGKDG 377

Query: 469 VPVRDRMSVRDYLSDVFTHAVQVAFPELGDK 499
            P + R      LSD+   AV+ A   +G+K
Sbjct: 378 KPFKTRAGGTIKLSDLLDEAVERATKLVGEK 408



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/330 (38%), Positives = 192/330 (58%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+        E+  +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMAVAKKLG-----MAPRQLAE--------EVLKHLDLTGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL + +   Q+  +      GV P        V++D+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINLFLDKQWLSAQVDAVTAAPRLGVAPVAPQT---VVIDYSAPNVAKEMHVGHVRSTII 138

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  ++  +   +ADL+ FY+E+K
Sbjct: 139  GDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAFLEKQQNEH-HEEHALADLEVFYREAK 197

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            + +DED  F +RA   VV LQ  D   +  W+ + D++    Q IYDR+NVTL+ +   G
Sbjct: 198  RTYDEDPAFAERARGYVVKLQGGDEYCRTMWKKLVDITMAQNQIIYDRMNVTLSRKDVMG 257

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L  KGL    +G  +++ +   ++   PM ++  K DGG+ Y T+D
Sbjct: 258  ESLYNDMLPGIVADLTAKGLAVQSEGATVVFLDEYKNKDGDPMGVIIKKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E  KAD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLKADRVLYYIDCRQHQHLMQ 347


>gi|375109112|ref|ZP_09755366.1| arginyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
 gi|374571298|gb|EHR42427.1| arginyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
          Length = 579

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 232/603 (38%), Positives = 348/603 (57%), Gaps = 49/603 (8%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  +  +  Q AF +LG    +  +  +    +FGD+Q N AM+  K  K      NP  
Sbjct: 3    IKQLLANKTQDAFIKLGLPAETNPAVTQSTRPEFGDYQINGAMSAAKQLK-----TNPRQ 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY-AGEQIKDI------IVN 593
            +A+ + +++  +   +        K+E+A PGF+NV L   + AGE  K        +  
Sbjct: 58   LAEQLVALLALDDLAS--------KVEIAGPGFINVTLKPEWLAGELAKAASDARLGVSA 109

Query: 594  GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
              QP T      V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDW
Sbjct: 110  NPQPQT------VVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDW 163

Query: 654  GTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            GTQFGMLIAHL+DK  + +  +S  +ADL+ FY+++KKRFD++  F  ++   VV LQ  
Sbjct: 164  GTQFGMLIAHLEDKLAEGVDLESVALADLEDFYRQAKKRFDDEAGFADKSRDYVVKLQSG 223

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLEL 769
            D   +K W++  D S +   ++Y +LNVTLT+   + ES Y   ++ +V  L   G+   
Sbjct: 224  DAHCQKLWQLFIDTSVKHSNEVYQKLNVTLTDADIKPESAYNPMLQPIVDQLVAAGIAVE 283

Query: 770  DDGRKIMW------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
            D G  +++       E + S P  I K+ GGF Y T+DLAA + R ++  AD I+  TD 
Sbjct: 284  DQGALVVFLSELADKEGKPS-PFIIQKTGGGFLYATTDLAACQYRSQQLAADRIIIFTDA 342

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q +HF+ +E  A+KAG+L  + T  D   FG ++GED K FKTR+G TVKL+ELL+E +
Sbjct: 343  RQALHFKQVELTARKAGLLRAD-TAYDHCPFGTMMGEDGKPFKTRTGGTVKLAELLEEAV 401

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +++K+  +EL+  E++E  + V  G +K+ADLS NR  DY+FS+D ML   G T
Sbjct: 402  VRADAVVREKS--SELSEQEIAEIARKVGIGAVKFADLSKNRTSDYIFSWDAMLAFEGAT 459

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A YL YAYTR+ SI R A +        +   P+ L  E+E  LA  +LR  + L  V +
Sbjct: 460  APYLQYAYTRVRSILRKAEVAD------SFQAPIVLTAEQERLLAVKILRFEETLQQVMK 513

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   + LC YLY++++ F  FY+ C  + +    K   V   RL+L+  TAK++++  D+
Sbjct: 514  DAQPNLLCSYLYELASLFMTFYEACPILRERFNRK---VSDSRLMLSILTAKLLRQGLDL 570

Query: 1064 LNI 1066
            L I
Sbjct: 571  LGI 573



 Score =  219 bits (558), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/361 (37%), Positives = 203/361 (56%), Gaps = 37/361 (10%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  +  +  Q AF +LG    +  +  +    +FGD+Q N AM+  K  K      NP  
Sbjct: 3   IKQLLANKTQDAFIKLGLPAETNPAVTQSTRPEFGDYQINGAMSAAKQLK-----TNPRQ 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY-AGEQIKDI------IVN 203
           +A+ + +++  +   +        K+E+A PGF+NV L   + AGE  K        +  
Sbjct: 58  LAEQLVALLALDDLAS--------KVEIAGPGFINVTLKPEWLAGELAKAASDARLGVSA 109

Query: 204 GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
             QP T      V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDW
Sbjct: 110 NPQPQT------VVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDW 163

Query: 264 GTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           GTQFGMLIAHL+DK  + +  +S  +ADL+ FY+++KKRFD++  F  ++   VV LQ  
Sbjct: 164 GTQFGMLIAHLEDKLAEGVDLESVALADLEDFYRQAKKRFDDEAGFADKSRDYVVKLQSG 223

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLEL 379
           D   +K W++  D S +   ++Y +LNVTLT+   + ES Y   ++ +V  L   G+   
Sbjct: 224 DAHCQKLWQLFIDTSVKHSNEVYQKLNVTLTDADIKPESAYNPMLQPIVDQLVAAGIAVE 283

Query: 380 DDGRKIMW------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           D G  +++       E + S P  I K+ GGF Y T+DLAA + R ++  AD I+  TD 
Sbjct: 284 DQGALVVFLSELADKEGKPS-PFIIQKTGGGFLYATTDLAACQYRSQQLAADRIIIFTDA 342

Query: 434 R 434
           R
Sbjct: 343 R 343



 Score =  219 bits (558), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/361 (37%), Positives = 203/361 (56%), Gaps = 37/361 (10%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  +  +  Q AF +LG    +  +  +    +FGD+Q N AM+  K  K      NP  
Sbjct: 3    IKQLLANKTQDAFIKLGLPAETNPAVTQSTRPEFGDYQINGAMSAAKQLK-----TNPRQ 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY-AGEQIKDI------IVN 1220
            +A+ + +++  +   +        K+E+A PGF+NV L   + AGE  K        +  
Sbjct: 58   LAEQLVALLALDDLAS--------KVEIAGPGFINVTLKPEWLAGELAKAASDARLGVSA 109

Query: 1221 GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
              QP T      V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDW
Sbjct: 110  NPQPQT------VVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDW 163

Query: 1281 GTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            GTQFGMLIAHL+DK  + +  +S  +ADL+ FY+++KKRFD++  F  ++   VV LQ  
Sbjct: 164  GTQFGMLIAHLEDKLAEGVDLESVALADLEDFYRQAKKRFDDEAGFADKSRDYVVKLQSG 223

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLEL 1396
            D   +K W++  D S +   ++Y +LNVTLT+   + ES Y   ++ +V  L   G+   
Sbjct: 224  DAHCQKLWQLFIDTSVKHSNEVYQKLNVTLTDADIKPESAYNPMLQPIVDQLVAAGIAVE 283

Query: 1397 DDGRKIMW------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            D G  +++       E + S P  I K+ GGF Y T+DLAA + R ++  AD I+  TD 
Sbjct: 284  DQGALVVFLSELADKEGKPS-PFIIQKTGGGFLYATTDLAACQYRSQQLAADRIIIFTDA 342

Query: 1451 R 1451
            R
Sbjct: 343  R 343


>gi|410613264|ref|ZP_11324328.1| arginyl-tRNA synthetase [Glaciecola psychrophila 170]
 gi|410167166|dbj|GAC38217.1| arginyl-tRNA synthetase [Glaciecola psychrophila 170]
          Length = 578

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/587 (37%), Positives = 331/587 (56%), Gaps = 32/587 (5%)

Query: 490  QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV 549
            Q A   +G    + A  +      FG +Q N AMAL K+ K     +NP DIAQ I  VV
Sbjct: 12   QAALTAIGAPEGTPAPLSRSTRVGFGHYQFNGAMALTKLLK-----QNPRDIAQKIVDVV 66

Query: 550  TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVD 609
                     L   ++K+EVA PGF+N+++   +  +Q++    +        K+  V+VD
Sbjct: 67   --------ELDDEVEKLEVAGPGFINIYIKPQWLAQQLQVANADSRLAIKTEKQQTVVVD 118

Query: 610  FSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP 669
            +S+PN+AKEMHVGHLRSTIIGD++++ LE+LGH V+R NH+GDWGTQFGML+AHL DK  
Sbjct: 119  YSAPNLAKEMHVGHLRSTIIGDSVAKTLEFLGHKVIRQNHMGDWGTQFGMLLAHLNDKLA 178

Query: 670  DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRR 729
                    ++DL+ FY+ +K RFD ++ F  RA   VV LQ  D    + W+   DVS  
Sbjct: 179  ANEIAETALSDLEDFYRAAKVRFDNEDGFADRARDYVVKLQSGDAQCMQLWQNFIDVSIA 238

Query: 730  DFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRG 782
              +++Y++LNV+L      GES Y   +   V  L+  G++    G ++ +     +  G
Sbjct: 239  HSEEVYEKLNVSLKRSDVMGESAYNHDLAATVAELKTAGIVVESQGAQVAFLQEMADKEG 298

Query: 783  SIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGI 841
            +    IV KS GG+ Y T+D AAIR R     AD  +  TD+ Q +HF+     A+KAG 
Sbjct: 299  NPAAYIVQKSGGGYLYATTDQAAIRYRNGVLGADRTLIFTDVRQALHFKQTGIVARKAGF 358

Query: 842  LNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTP 901
            +  +++  +   FG++LG D K FKTR+G TVKL+ELL+E + R+   +    R ++L+ 
Sbjct: 359  IKADQS-YEHCPFGMMLGSDGKPFKTRTGGTVKLAELLEEAIERA--AILINKRESDLSA 415

Query: 902  TELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTA 961
             E       V  G +KYADLS NR  DY+F++D ML   GNTA YL YAY R+ SI R A
Sbjct: 416  QERKIIADKVGIGAVKYADLSKNRTTDYIFNWDTMLSFEGNTAPYLQYAYARVQSIFRKA 475

Query: 962  GINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAF 1021
             ++  +L+       + LE  +E  LA  L++  + +  V+ +   H LC Y+Y++++ F
Sbjct: 476  DVDDVNLQ-----ADIQLEEVQEQLLAVKLMQYVEAIKQVSSEATPHVLCTYIYELASLF 530

Query: 1022 SEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              FY+ C  ++   EG  +     RL+LA+ TAK ++   D+L I T
Sbjct: 531  MSFYEACPILK---EGIDEQTKNSRLMLAQLTAKTLQSGLDLLGIET 574



 Score =  228 bits (582), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/343 (38%), Positives = 191/343 (55%), Gaps = 21/343 (6%)

Query: 100 QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV 159
           Q A   +G    + A  +      FG +Q N AMAL K+ K     +NP DIAQ I  VV
Sbjct: 12  QAALTAIGAPEGTPAPLSRSTRVGFGHYQFNGAMALTKLLK-----QNPRDIAQKIVDVV 66

Query: 160 TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVD 219
                    L   ++K+EVA PGF+N+++   +  +Q++    +        K+  V+VD
Sbjct: 67  --------ELDDEVEKLEVAGPGFINIYIKPQWLAQQLQVANADSRLAIKTEKQQTVVVD 118

Query: 220 FSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP 279
           +S+PN+AKEMHVGHLRSTIIGD++++ LE+LGH V+R NH+GDWGTQFGML+AHL DK  
Sbjct: 119 YSAPNLAKEMHVGHLRSTIIGDSVAKTLEFLGHKVIRQNHMGDWGTQFGMLLAHLNDKLA 178

Query: 280 DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRR 339
                   ++DL+ FY+ +K RFD ++ F  RA   VV LQ  D    + W+   DVS  
Sbjct: 179 ANEIAETALSDLEDFYRAAKVRFDNEDGFADRARDYVVKLQSGDAQCMQLWQNFIDVSIA 238

Query: 340 DFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRG 392
             +++Y++LNV+L      GES Y   +   V  L+  G++    G ++ +     +  G
Sbjct: 239 HSEEVYEKLNVSLKRSDVMGESAYNHDLAATVAELKTAGIVVESQGAQVAFLQEMADKEG 298

Query: 393 SIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
           +    IV KS GG+ Y T+D AAIR R     AD  +  TD R
Sbjct: 299 NPAAYIVQKSGGGYLYATTDQAAIRYRNGVLGADRTLIFTDVR 341



 Score =  228 bits (582), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/343 (38%), Positives = 191/343 (55%), Gaps = 21/343 (6%)

Query: 1117 QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV 1176
            Q A   +G    + A  +      FG +Q N AMAL K+ K     +NP DIAQ I  VV
Sbjct: 12   QAALTAIGAPEGTPAPLSRSTRVGFGHYQFNGAMALTKLLK-----QNPRDIAQKIVDVV 66

Query: 1177 TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVD 1236
                     L   ++K+EVA PGF+N+++   +  +Q++    +        K+  V+VD
Sbjct: 67   --------ELDDEVEKLEVAGPGFINIYIKPQWLAQQLQVANADSRLAIKTEKQQTVVVD 118

Query: 1237 FSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP 1296
            +S+PN+AKEMHVGHLRSTIIGD++++ LE+LGH V+R NH+GDWGTQFGML+AHL DK  
Sbjct: 119  YSAPNLAKEMHVGHLRSTIIGDSVAKTLEFLGHKVIRQNHMGDWGTQFGMLLAHLNDKLA 178

Query: 1297 DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRR 1356
                    ++DL+ FY+ +K RFD ++ F  RA   VV LQ  D    + W+   DVS  
Sbjct: 179  ANEIAETALSDLEDFYRAAKVRFDNEDGFADRARDYVVKLQSGDAQCMQLWQNFIDVSIA 238

Query: 1357 DFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRG 1409
              +++Y++LNV+L      GES Y   +   V  L+  G++    G ++ +     +  G
Sbjct: 239  HSEEVYEKLNVSLKRSDVMGESAYNHDLAATVAELKTAGIVVESQGAQVAFLQEMADKEG 298

Query: 1410 SIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            +    IV KS GG+ Y T+D AAIR R     AD  +  TD R
Sbjct: 299  NPAAYIVQKSGGGYLYATTDQAAIRYRNGVLGADRTLIFTDVR 341


>gi|433537447|ref|ZP_20493942.1| arginine--tRNA ligase [Neisseria meningitidis 77221]
 gi|432271212|gb|ELL26338.1| arginine--tRNA ligase [Neisseria meningitidis 77221]
          Length = 572

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 238/563 (42%), Positives = 320/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  227 bits (578), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  220 bits (561), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|161870367|ref|YP_001599537.1| arginyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595920|gb|ABX73580.1| arginyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 581

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 320/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 45   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 91

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 92   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 149

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 150  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 207

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 208  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 267

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 268  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 327

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 328  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 386

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 387  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 444

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 445  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 497

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 498  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 552

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 553  NSRLQLAKLTGDTLKQGLDLLGI 575



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 45  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 91

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 92  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 149

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 150 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 207

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 208 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 267

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 268 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 327

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 328 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 387

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 388 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 445



 Score =  220 bits (561), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 45   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 91

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 92   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 149

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 150  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 207

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 208  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 267

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 268  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 327

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 328  CLRYRVGTLHADRLLYVVDHR 348


>gi|429084836|ref|ZP_19147827.1| Arginyl-tRNA synthetase [Cronobacter condimenti 1330]
 gi|426546075|emb|CCJ73868.1| Arginyl-tRNA synthetase [Cronobacter condimenti 1330]
          Length = 577

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + +   + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKHVDAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            K +DEDE F  RA   VV LQ  D   ++ W  + D++    Q  Y+RLNVTLT +   G
Sbjct: 199  KHYDEDEEFAARARSYVVKLQGGDEYCREMWRKLVDITMAQNQITYERLNVTLTRKDVMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLSELLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 375  GKDGKPFKTRAGGTIKLSELLDEALDRARRLVAEKN--PDMPADELEKLANAVGIGAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AG+   +L     + PV 
Sbjct: 433  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGVAESEL-----TAPVI 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            ++ ++E  LA  LL+  ++L +V RD   H +C YLYD++  FS FY++C  +  D +  
Sbjct: 488  IQDDREAQLAARLLQFEEILGVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILTADTD-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA  TAK +K   D L I T
Sbjct: 546  --ALRQSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  223 bits (568), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 190/334 (56%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + +   + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDPAFLAKHVDAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140 GDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           K +DEDE F  RA   VV LQ  D   ++ W  + D++    Q  Y+RLNVTLT +   G
Sbjct: 199 KHYDEDEEFAARARSYVVKLQGGDEYCREMWRKLVDITMAQNQITYERLNVTLTRKDVMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 349



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 189/333 (56%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + +   + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKHVDAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            K +DEDE F  RA   VV LQ  D   ++ W  + D++    Q  Y+RLNVTLT +   G
Sbjct: 199  KHYDEDEEFAARARSYVVKLQGGDEYCREMWRKLVDITMAQNQITYERLNVTLTRKDVMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 348


>gi|374314181|ref|YP_005060610.1| arginyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
 gi|363988407|gb|AEW44598.1| arginyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
          Length = 576

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/606 (37%), Positives = 347/606 (57%), Gaps = 46/606 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++ +LS+ F  A+  A    G  T   A  ++    +FG +Q N  +++ K      +
Sbjct: 1    MNIQVFLSNKFHQALIAA----GAPTDCKAQVHQSAKEQFGHYQVNGVISIAK------Q 50

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
             + P    Q +A  V  +L    ++  +  KIE+A  GF+N+F++  +    I  I+   
Sbjct: 51   LRIP---PQQLAEKVLQQL----NIGDIASKIEIASHGFINIFINNKWLARHIDYIL--- 100

Query: 595  VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
               P L     K   +++D+S+PN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHV
Sbjct: 101  -SAPKLGLMKVKPQTIVIDYSAPNLAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRTNHV 159

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGMLIA+L D   + ++    ++D++ FY+++KK +DED  F ++A + VV LQ
Sbjct: 160  GDWGTQFGMLIAYL-DIIQNDISNEIVLSDMEEFYRKAKKYYDEDSEFAEKARKYVVKLQ 218

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 767
              D   K  W  + +++    Q IY+RLNVTLTE    GES+Y   +  +V  L+ KGL 
Sbjct: 219  SGDNYCKAMWRKLVNITIAHNQIIYNRLNVTLTENDVIGESYYNAMLPGIVADLKAKGLA 278

Query: 768  ELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
               +G  +++    +++   PM IV  K DGG+ Y T+D+A  + R E   AD I+Y TD
Sbjct: 279  VESEGATVVFLDAYQNKKGNPMGIVVQKKDGGYLYTTTDIACAKYRYETLGADRILYYTD 338

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q  H       A+KAG L P    ++   FG++LG++ K FKTR G TVKLS+LLDE 
Sbjct: 339  SRQHQHLMQAWSIARKAGYL-PEHVSLEHHLFGMILGQNGKPFKTRDGGTVKLSDLLDEA 397

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            + R+   + +KN   ++   E+++  + V  G +KYADLS +R  DY+F +DKML   GN
Sbjct: 398  IARAKKLIINKN--PKMPIEEITQVARVVGIGAVKYADLSKHRATDYIFDWDKMLVFTGN 455

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA Y+ YAYTRI SI + + I+   L +     P+ +  + E ALA  +L+  + L  VT
Sbjct: 456  TAPYIQYAYTRILSIFKHSKIDENSLIL-----PLVIHDKHEIALAIRMLQFEEALHAVT 510

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
            RD   H +C YLYD++  FS FY +C  +    E     V   RL L+  T++++K   +
Sbjct: 511  RDGTPHIMCSYLYDLAGIFSSFYQHCQILNTHNE----IVQQSRLKLSLLTSRILKTGLN 566

Query: 1063 ILNIRT 1068
             L I T
Sbjct: 567  TLGIET 572



 Score =  233 bits (595), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 215/370 (58%), Gaps = 34/370 (9%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++ +LS+ F  A+  A    G  T   A  ++    +FG +Q N  +++ K      +
Sbjct: 1   MNIQVFLSNKFHQALIAA----GAPTDCKAQVHQSAKEQFGHYQVNGVISIAK------Q 50

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            + P    Q +A  V  +L    ++  +  KIE+A  GF+N+F++  +    I  I+   
Sbjct: 51  LRIP---PQQLAEKVLQQL----NIGDIASKIEIASHGFINIFINNKWLARHIDYIL--- 100

Query: 205 VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
              P L     K   +++D+S+PN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHV
Sbjct: 101 -SAPKLGLMKVKPQTIVIDYSAPNLAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRTNHV 159

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGMLIA+L D   + ++    ++D++ FY+++KK +DED  F ++A + VV LQ
Sbjct: 160 GDWGTQFGMLIAYL-DIIQNDISNEIVLSDMEEFYRKAKKYYDEDSEFAEKARKYVVKLQ 218

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 377
             D   K  W  + +++    Q IY+RLNVTLTE    GES+Y   +  +V  L+ KGL 
Sbjct: 219 SGDNYCKAMWRKLVNITIAHNQIIYNRLNVTLTENDVIGESYYNAMLPGIVADLKAKGLA 278

Query: 378 ELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
              +G  +++    +++   PM IV  K DGG+ Y T+D+A  + R E   AD I+Y TD
Sbjct: 279 VESEGATVVFLDAYQNKKGNPMGIVVQKKDGGYLYTTTDIACAKYRYETLGADRILYYTD 338

Query: 433 HRSYHQVLQA 442
            R +  ++QA
Sbjct: 339 SRQHQHLMQA 348



 Score =  232 bits (591), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 214/369 (57%), Gaps = 34/369 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++ +LS+ F  A+  A    G  T   A  ++    +FG +Q N  +++ K      +
Sbjct: 1    MNIQVFLSNKFHQALIAA----GAPTDCKAQVHQSAKEQFGHYQVNGVISIAK------Q 50

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             + P    Q +A  V  +L    ++  +  KIE+A  GF+N+F++  +    I  I+   
Sbjct: 51   LRIP---PQQLAEKVLQQL----NIGDIASKIEIASHGFINIFINNKWLARHIDYIL--- 100

Query: 1222 VQPPTLN----KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
               P L     K   +++D+S+PN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHV
Sbjct: 101  -SAPKLGLMKVKPQTIVIDYSAPNLAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRTNHV 159

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGMLIA+L D   + ++    ++D++ FY+++KK +DED  F ++A + VV LQ
Sbjct: 160  GDWGTQFGMLIAYL-DIIQNDISNEIVLSDMEEFYRKAKKYYDEDSEFAEKARKYVVKLQ 218

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 1394
              D   K  W  + +++    Q IY+RLNVTLTE    GES+Y   +  +V  L+ KGL 
Sbjct: 219  SGDNYCKAMWRKLVNITIAHNQIIYNRLNVTLTENDVIGESYYNAMLPGIVADLKAKGLA 278

Query: 1395 ELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
               +G  +++    +++   PM IV  K DGG+ Y T+D+A  + R E   AD I+Y TD
Sbjct: 279  VESEGATVVFLDAYQNKKGNPMGIVVQKKDGGYLYTTTDIACAKYRYETLGADRILYYTD 338

Query: 1450 HRSYHQVLQ 1458
             R +  ++Q
Sbjct: 339  SRQHQHLMQ 347


>gi|326796968|ref|YP_004314788.1| arginyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326547732|gb|ADZ92952.1| Arginyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 577

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/600 (38%), Positives = 328/600 (54%), Gaps = 47/600 (7%)

Query: 484  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 543
            +    +Q A    G    S A   +    +FGD+Q N  M + K  K      NP   A+
Sbjct: 6    LLNQRIQAAMIAAGAPEESPALVRQSAKVQFGDYQANGIMGVAKKLK-----TNPRAFAE 60

Query: 544  SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI-------IVNGVQ 596
             +   +         L  + DK+E+A PGF+NVFL   +  ++ K +       +V   +
Sbjct: 61   QVLEKL--------DLTDLADKVEIAGPGFINVFLKNAWLAQEQKSLRKSERLDVVTVSE 112

Query: 597  PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
            P T      V+VD+S+PN+AKEMHVGHLRST+IGD + R LE+LGH VVR NHVGDWGTQ
Sbjct: 113  PQT------VVVDYSAPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHKVVRQNHVGDWGTQ 166

Query: 657  FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 716
            FGML+A+++    +    S  ++DL+ FY+E+KK FD+DE F  RA + VV LQ  D + 
Sbjct: 167  FGMLLAYMERLRAESSEISMALSDLETFYREAKKCFDDDEAFSVRARELVVKLQSGDEEC 226

Query: 717  KKAWEMICDVSRRDFQKIYDRLNVTLTERG---ESFYQKHMEQLVPYLEKKGLLELDDGR 773
            K  W+   ++S    ++ Y  L V+L  +    ES Y   ++ ++  L+ KGL++ D G 
Sbjct: 227  KALWQDFINISLEHCEETYQMLGVSLERKNVMPESAYNDDLQNVINDLDAKGLIKEDQGA 286

Query: 774  KIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            K ++ E+     G I P+ + K+ GGF Y T+DLAA+R R    KAD  +Y  D  Q +H
Sbjct: 287  KCVFLEEFANKDGEITPIIVQKTGGGFLYSTTDLAAVRYRQNVLKADRALYFVDARQSLH 346

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
            F  +   ++KAG  + +   ++ + FG V+G D K FKTRSG   KLS LL+E   R+  
Sbjct: 347  FEQIFTLSRKAGFAD-DSISLEHMPFGTVMGSDGKPFKTRSGGVAKLSALLEEAQERAYK 405

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             +  KN   ++   EL    + V    +KYADLS NR  DYVF++D ML   GNTA YL 
Sbjct: 406  LVASKN--PDMAEDELRNIGRVVGVASVKYADLSKNRTSDYVFNWDTMLSFEGNTAPYLQ 463

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YAY+R+ASI R A     D+  AA    +S+  ++E ALA  L++  + +  V  D   H
Sbjct: 464  YAYSRVASIVRNA-----DIDAAALQGDISVIEDQERALAVKLVQFEEAIQQVGNDGMPH 518

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             LC YLY+++  F  FY+ C  ++ D E     V   RL LA  TA  +K    +L I T
Sbjct: 519  FLCAYLYELAGTFMSFYEACPILKADEE-----VKNSRLQLALNTASTLKLGLSLLGIET 573



 Score =  233 bits (593), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 142/381 (37%), Positives = 207/381 (54%), Gaps = 37/381 (9%)

Query: 94  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 153
           +    +Q A    G    S A   +    +FGD+Q N  M + K  K      NP   A+
Sbjct: 6   LLNQRIQAAMIAAGAPEESPALVRQSAKVQFGDYQANGIMGVAKKLK-----TNPRAFAE 60

Query: 154 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI-------IVNGVQ 206
            +   +         L  + DK+E+A PGF+NVFL   +  ++ K +       +V   +
Sbjct: 61  QVLEKL--------DLTDLADKVEIAGPGFINVFLKNAWLAQEQKSLRKSERLDVVTVSE 112

Query: 207 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 266
           P T      V+VD+S+PN+AKEMHVGHLRST+IGD + R LE+LGH VVR NHVGDWGTQ
Sbjct: 113 PQT------VVVDYSAPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHKVVRQNHVGDWGTQ 166

Query: 267 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 326
           FGML+A+++    +    S  ++DL+ FY+E+KK FD+DE F  RA + VV LQ  D + 
Sbjct: 167 FGMLLAYMERLRAESSEISMALSDLETFYREAKKCFDDDEAFSVRARELVVKLQSGDEEC 226

Query: 327 KKAWEMICDVSRRDFQKIYDRLNVTLTERG---ESFYQKHMEQLVPYLEKKGLLELDDGR 383
           K  W+   ++S    ++ Y  L V+L  +    ES Y   ++ ++  L+ KGL++ D G 
Sbjct: 227 KALWQDFINISLEHCEETYQMLGVSLERKNVMPESAYNDDLQNVINDLDAKGLIKEDQGA 286

Query: 384 KIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR-SYH 437
           K ++ E+     G I P+ + K+ GGF Y T+DLAA+R R    KAD  +Y  D R S H
Sbjct: 287 KCVFLEEFANKDGEITPIIVQKTGGGFLYSTTDLAAVRYRQNVLKADRALYFVDARQSLH 346

Query: 438 QVLQAIAEEEKKQGISSSSSS 458
              + I    +K G +  S S
Sbjct: 347 --FEQIFTLSRKAGFADDSIS 365



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/356 (37%), Positives = 197/356 (55%), Gaps = 34/356 (9%)

Query: 1111 VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 1170
            +    +Q A    G    S A   +    +FGD+Q N  M + K  K      NP   A+
Sbjct: 6    LLNQRIQAAMIAAGAPEESPALVRQSAKVQFGDYQANGIMGVAKKLK-----TNPRAFAE 60

Query: 1171 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI-------IVNGVQ 1223
             +   +         L  + DK+E+A PGF+NVFL   +  ++ K +       +V   +
Sbjct: 61   QVLEKL--------DLTDLADKVEIAGPGFINVFLKNAWLAQEQKSLRKSERLDVVTVSE 112

Query: 1224 PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 1283
            P T      V+VD+S+PN+AKEMHVGHLRST+IGD + R LE+LGH VVR NHVGDWGTQ
Sbjct: 113  PQT------VVVDYSAPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHKVVRQNHVGDWGTQ 166

Query: 1284 FGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDY 1343
            FGML+A+++    +    S  ++DL+ FY+E+KK FD+DE F  RA + VV LQ  D + 
Sbjct: 167  FGMLLAYMERLRAESSEISMALSDLETFYREAKKCFDDDEAFSVRARELVVKLQSGDEEC 226

Query: 1344 KKAWEMICDVSRRDFQKIYDRLNVTLTERG---ESFYQKHMEQLVPYLEKKGLLELDDGR 1400
            K  W+   ++S    ++ Y  L V+L  +    ES Y   ++ ++  L+ KGL++ D G 
Sbjct: 227  KALWQDFINISLEHCEETYQMLGVSLERKNVMPESAYNDDLQNVINDLDAKGLIKEDQGA 286

Query: 1401 KIMWGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            K ++ E+     G I P+ + K+ GGF Y T+DLAA+R R    KAD  +Y  D R
Sbjct: 287  KCVFLEEFANKDGEITPIIVQKTGGGFLYSTTDLAAVRYRQNVLKADRALYFVDAR 342


>gi|91228441|ref|ZP_01262366.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188025|gb|EAS74332.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 577

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 323/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEDFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELSADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  + L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDALQ-----GDIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 195/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEDFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELSADRVLYFIDSRQHQHLMQA 349



 Score =  244 bits (622), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 194/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEDFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELSADRVLYFIDSRQHQHLMQ 348


>gi|386019240|ref|YP_005937264.1| arginyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
 gi|327479212|gb|AEA82522.1| arginyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 579

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 224/554 (40%), Positives = 327/554 (59%), Gaps = 37/554 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K    K     P ++A+ +       +A  P  A+V  K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGMK-----PRELAEKL-------IAALPQDAQV-SKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N F +     ++++  + +  +     + K RV++D SSPN+AKEMHVGHLRSTIIGD +
Sbjct: 88   NFFQNSDALAQRLETALADAQLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAV 147

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
             R+LE+LG +V+R NHVGDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFD
Sbjct: 148  GRVLEFLGDEVIRQNHVGDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFD 204

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E   F  RA + VV LQ  D      W    D+S    QKIYDRLNV LT    +GES Y
Sbjct: 205  ESPEFADRARELVVKLQAGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAY 264

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 805
               +  +V  L +KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+
Sbjct: 265  NADLADIVEALREKGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAM 324

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R ++  AD ++Y  D  Q +HF++  E A++AG ++    +++ +GFG + G D + F
Sbjct: 325  RYRSQQLHADRVLYFVDQRQALHFQMAFEVARRAGFVHEG-MQLEHMGFGTMNGADGRPF 383

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTR G TVKL +LLDE  +R+   +K KN   EL   EL +  +AV    +KYADLS +R
Sbjct: 384  KTRDGGTVKLIDLLDEAEQRAYALVKGKN--PELEEAELRQIARAVGISAVKYADLSKHR 441

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY F+F+ ML   GNTA YLLYAYTR+AS+ R  G   +++     S  + L+ E+E 
Sbjct: 442  TSDYRFNFELMLSFEGNTAPYLLYAYTRVASVFRKLGKGIDEI-----SGHIQLDAEQEL 496

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
            ALA  L +  +VL  V      H LC YLYD++  FS FY++C  +  + + + ++    
Sbjct: 497  ALAAKLAQFGEVLNSVGEKGEPHLLCAYLYDLAGLFSSFYEHCPILSAEQDAQKQS---- 552

Query: 1046 RLLLAEATAKVMKK 1059
            RL LA  T + +K+
Sbjct: 553  RLRLAALTGRTLKQ 566



 Score =  229 bits (584), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 189/319 (59%), Gaps = 25/319 (7%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K    K     P ++A+ +       +A  P  A+V  K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAKPAGMK-----PRELAEKL-------IAALPQDAQV-SKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N F +     ++++  + +  +     + K RV++D SSPN+AKEMHVGHLRSTIIGD +
Sbjct: 88  NFFQNSDALAQRLETALADAQLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAV 147

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            R+LE+LG +V+R NHVGDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFD
Sbjct: 148 GRVLEFLGDEVIRQNHVGDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFD 204

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E   F  RA + VV LQ  D      W    D+S    QKIYDRLNV LT    +GES Y
Sbjct: 205 ESPEFADRARELVVKLQAGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAY 264

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 415
              +  +V  L +KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+
Sbjct: 265 NADLADIVEALREKGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAM 324

Query: 416 RQRIEEEKADWIVYVTDHR 434
           R R ++  AD ++Y  D R
Sbjct: 325 RYRSQQLHADRVLYFVDQR 343



 Score =  229 bits (584), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 189/319 (59%), Gaps = 25/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K    K     P ++A+ +       +A  P  A+V  K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGMK-----PRELAEKL-------IAALPQDAQV-SKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N F +     ++++  + +  +     + K RV++D SSPN+AKEMHVGHLRSTIIGD +
Sbjct: 88   NFFQNSDALAQRLETALADAQLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAV 147

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
             R+LE+LG +V+R NHVGDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFD
Sbjct: 148  GRVLEFLGDEVIRQNHVGDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFD 204

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E   F  RA + VV LQ  D      W    D+S    QKIYDRLNV LT    +GES Y
Sbjct: 205  ESPEFADRARELVVKLQAGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAY 264

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 1432
               +  +V  L +KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+
Sbjct: 265  NADLADIVEALREKGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAM 324

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R ++  AD ++Y  D R
Sbjct: 325  RYRSQQLHADRVLYFVDQR 343


>gi|269967949|ref|ZP_06181989.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269827472|gb|EEZ81766.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 577

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 323/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEDFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELSADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  + L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDALQ-----GDIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 195/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEDFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELSADRVLYFIDSRQHQHLMQA 349



 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 194/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +       ++   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADSRLGVAADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEDFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELSADRVLYFIDSRQHQHLMQ 348


>gi|292488556|ref|YP_003531440.1| arginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899728|ref|YP_003539097.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|428785497|ref|ZP_19002988.1| arginyl-tRNA synthetase [Erwinia amylovora ACW56400]
 gi|291199576|emb|CBJ46693.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553987|emb|CBA21032.1| Arginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312172701|emb|CBX80957.1| Arginyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
 gi|426277059|gb|EKV54786.1| arginyl-tRNA synthetase [Erwinia amylovora ACW56400]
          Length = 576

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/608 (37%), Positives = 347/608 (57%), Gaps = 50/608 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+  + A+ VA     D    V  + +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQAM-VAVGAPADSEPQVRQSAKA---QFGDYQANGIMAVAKKLG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
               P  +A+ +   +         L  +  K+++A PGF+N+FL+  +   QI  ++   
Sbjct: 53   -MPPRQLAEKVLEQL--------DLNGIAHKVDIAGPGFINIFLAPQWLSAQIDSVLTAP 103

Query: 592  ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
               V+ V+P T      V++D+S+PN+AKEMHVGH+RSTIIGD  +R L +LGH V+R N
Sbjct: 104  KLGVSPVEPET------VVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLGHKVIRAN 157

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGMLIA+L+ +  ++  ++  +ADL+AFY+E+K+ +DED  F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLEKQQNEH-HEAIALADLEAFYREAKRTYDEDPAFAARARGYVVK 216

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D   +K W+ + D++    Q IYDR+NVTLT     GES Y   +  +V  L+ KG
Sbjct: 217  LQSGDRYCRKMWKQLVDITMTQNQLIYDRMNVTLTRDDVMGESLYNDMLPAIVSDLKAKG 276

Query: 766  LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E  KAD ++Y 
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYY 336

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q  H        +KAG + P+   ++   FG++LG+D K FKTR+G T+KLS+LLD
Sbjct: 337  IDSRQHQHLMQAWTIVRKAGYV-PDSIPLEHHMFGMMLGKDGKPFKTRAGGTIKLSDLLD 395

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   +  KN   ++   EL+     V  G +KYADLS +R  DY+F +D ML   
Sbjct: 396  EAVDRAAKLVAVKN--PDMPADELAALANIVGIGAVKYADLSKSRTTDYIFDWDNMLAFE 453

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA Y+ YAYTR+ S+ R AGI++E     A      +  ++E ALA  LL+ ++ +  
Sbjct: 454  GNTAPYMQYAYTRVLSVFRKAGIDAE-----AVGGTTRIIEDREAALAVRLLQFDETITQ 508

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V RD   H +C YLYD++  FS FY++C  +  + +   ++    RL LA  TAK +K+ 
Sbjct: 509  VARDGMPHVMCAYLYDLAGLFSGFYEHCPILNAEDDATRQS----RLRLALLTAKTLKQG 564

Query: 1061 FDILNIRT 1068
             D L I T
Sbjct: 565  LDTLGIET 572



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 214/372 (57%), Gaps = 38/372 (10%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+  + A+ VA     D    V  + +    +FGD+Q N  MA+ K       
Sbjct: 1   MNIQALLSEKVSQAM-VAVGAPADSEPQVRQSAKA---QFGDYQANGIMAVAKKLG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
              P  +A+ +   +         L  +  K+++A PGF+N+FL+  +   QI  ++   
Sbjct: 53  -MPPRQLAEKVLEQL--------DLNGIAHKVDIAGPGFINIFLAPQWLSAQIDSVLTAP 103

Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
              V+ V+P T      V++D+S+PN+AKEMHVGH+RSTIIGD  +R L +LGH V+R N
Sbjct: 104 KLGVSPVEPET------VVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLGHKVIRAN 157

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGMLIA+L+ +  ++  ++  +ADL+AFY+E+K+ +DED  F  RA   VV 
Sbjct: 158 HVGDWGTQFGMLIAYLEKQQNEH-HEAIALADLEAFYREAKRTYDEDPAFAARARGYVVK 216

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D   +K W+ + D++    Q IYDR+NVTLT     GES Y   +  +V  L+ KG
Sbjct: 217 LQSGDRYCRKMWKQLVDITMTQNQLIYDRMNVTLTRDDVMGESLYNDMLPAIVSDLKAKG 276

Query: 376 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E  KAD ++Y 
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYY 336

Query: 431 TDHRSYHQVLQA 442
            D R +  ++QA
Sbjct: 337 IDSRQHQHLMQA 348



 Score =  233 bits (593), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/371 (36%), Positives = 213/371 (57%), Gaps = 38/371 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+  + A+ VA     D    V  + +    +FGD+Q N  MA+ K       
Sbjct: 1    MNIQALLSEKVSQAM-VAVGAPADSEPQVRQSAKA---QFGDYQANGIMAVAKKLG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
               P  +A+ +   +         L  +  K+++A PGF+N+FL+  +   QI  ++   
Sbjct: 53   -MPPRQLAEKVLEQL--------DLNGIAHKVDIAGPGFINIFLAPQWLSAQIDSVLTAP 103

Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
               V+ V+P T      V++D+S+PN+AKEMHVGH+RSTIIGD  +R L +LGH V+R N
Sbjct: 104  KLGVSPVEPET------VVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLGHKVIRAN 157

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGMLIA+L+ +  ++  ++  +ADL+AFY+E+K+ +DED  F  RA   VV 
Sbjct: 158  HVGDWGTQFGMLIAYLEKQQNEH-HEAIALADLEAFYREAKRTYDEDPAFAARARGYVVK 216

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D   +K W+ + D++    Q IYDR+NVTLT     GES Y   +  +V  L+ KG
Sbjct: 217  LQSGDRYCRKMWKQLVDITMTQNQLIYDRMNVTLTRDDVMGESLYNDMLPAIVSDLKAKG 276

Query: 1393 LLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            L    +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E  KAD ++Y 
Sbjct: 277  LAVESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYY 336

Query: 1448 TDHRSYHQVLQ 1458
             D R +  ++Q
Sbjct: 337  IDSRQHQHLMQ 347


>gi|320157028|ref|YP_004189407.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932340|gb|ADV87204.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 577

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADPRLGVASEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLDEFKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELAEDEKKAIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++ +DL+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVSMDDLQ-----GEIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/414 (35%), Positives = 222/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADPRLGVASEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLDEFKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R EE  AD ++Y  D R +  ++QA     K   +  S S +       +     P 
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPF 381

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPELG-DKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  D+  ++A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADL 435



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADPRLGVASEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLDEFKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|349610037|ref|ZP_08889399.1| arginyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
 gi|348610807|gb|EGY60489.1| arginyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
          Length = 572

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/563 (41%), Positives = 320/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ     V   LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQK----VVEALADN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I   + +   G+     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHAALNDTRFGI--AETDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDAKAEFIGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY  +T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEACPILK--AEGATR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ     V   LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQK----VVEALADN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I   + +   G+     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIHAALNDTRFGI--AETDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +   + ++  G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  219 bits (559), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ     V   LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQK----VVEALADN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I   + +   G+     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHAALNDTRFGI--AETDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|385340385|ref|YP_005894257.1| arginyl-tRNA synthetase [Neisseria meningitidis G2136]
 gi|416202617|ref|ZP_11620004.1| arginyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|433466547|ref|ZP_20424008.1| arginine--tRNA ligase [Neisseria meningitidis 87255]
 gi|325142687|gb|EGC65068.1| arginyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198629|gb|ADY94085.1| arginyl-tRNA synthetase [Neisseria meningitidis G2136]
 gi|432204657|gb|ELK60696.1| arginine--tRNA ligase [Neisseria meningitidis 87255]
          Length = 572

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/563 (41%), Positives = 319/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PESVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++ ++  +     
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILKAESASR----- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  S  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPESVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  220 bits (561), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|429105085|ref|ZP_19166954.1| Arginyl-tRNA synthetase [Cronobacter malonaticus 681]
 gi|426291808|emb|CCJ93067.1| Arginyl-tRNA synthetase [Cronobacter malonaticus 681]
          Length = 577

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 324/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDEYCREMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLSELLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 375  GKDGKPFKTRAGGTIKLSELLDEALDRARRLVAEKN--PDMPADELEKLANAVGIGAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AG++  +L     + PV 
Sbjct: 433  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGVSESEL-----TAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            ++ ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + +  
Sbjct: 488  IQDDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILTAETD-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA  TAK +K   D L I T
Sbjct: 546  --ALRQSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 190/334 (56%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y RLNVTLT     G
Sbjct: 199 KHYDEDEAFAERARSYVVKLQGGDEYCREMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 349



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 189/333 (56%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDEYCREMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 348


>gi|167468376|ref|ZP_02333080.1| arginyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 532

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 216/527 (40%), Positives = 310/527 (58%), Gaps = 39/527 (7%)

Query: 559  LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSS 612
            L  +  KIE+A PGF+N+FL R +  E+++  +      V  V+P T      ++VD+S+
Sbjct: 24   LTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGVAPVEPQT------IVVDYSA 77

Query: 613  PNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL 672
            PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R NHVGDWGTQFGMLIA+L+ K  +  
Sbjct: 78   PNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAYLE-KMQNEN 136

Query: 673  TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 732
                 ++DL+ FY+++KK +DEDE F  RA   VV LQ  D   ++ W  + D++    Q
Sbjct: 137  ASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQ 196

Query: 733  KIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDR 781
              YDRLNVTLT+    GES Y   + ++V  L+ KGL    +G  +++        GE  
Sbjct: 197  VAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKGLAVESEGATVVYLDEYKNKDGEPM 256

Query: 782  GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGI 841
            G I   I K DGG+ Y T+D+A  + R E   AD I+Y  D  Q  H        +KAG 
Sbjct: 257  GVI---IQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGY 313

Query: 842  LNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTP 901
            + P    ++   FG++LG+D K FKTRSG TVKLS+LLDE + R+   + +KN   ++  
Sbjct: 314  V-PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKN--PDMPA 370

Query: 902  TELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTA 961
             EL +   AV  G +KYADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A
Sbjct: 371  DELKQVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDGNTAPYMQYAYTRVVSVFRRA 430

Query: 962  GINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAF 1021
            G++   L     + P+ +  ++E  LA  LL+  +++  V R+   H +C YLYD++  F
Sbjct: 431  GVDETSL-----TLPLVVTEDREATLATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLF 485

Query: 1022 SEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            S FY++C  +  ++E     +   RL LA  TAK +K+  D L I+T
Sbjct: 486  SSFYEHCQILNAESE----EIRQSRLKLAMLTAKTLKQGLDTLGIQT 528



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 175/291 (60%), Gaps = 27/291 (9%)

Query: 169 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSS 222
           L  +  KIE+A PGF+N+FL R +  E+++  +      V  V+P T      ++VD+S+
Sbjct: 24  LTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGVAPVEPQT------IVVDYSA 77

Query: 223 PNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL 282
           PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R NHVGDWGTQFGMLIA+L+ K  +  
Sbjct: 78  PNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAYLE-KMQNEN 136

Query: 283 TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 342
                ++DL+ FY+++KK +DEDE F  RA   VV LQ  D   ++ W  + D++    Q
Sbjct: 137 ASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQ 196

Query: 343 KIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDR 391
             YDRLNVTLT+    GES Y   + ++V  L+ KGL    +G  +++        GE  
Sbjct: 197 VAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKGLAVESEGATVVYLDEYKNKDGEPM 256

Query: 392 GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           G I   I K DGG+ Y T+D+A  + R E   AD I+Y  D R +  ++QA
Sbjct: 257 GVI---IQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQA 304



 Score =  223 bits (567), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/290 (42%), Positives = 174/290 (60%), Gaps = 27/290 (9%)

Query: 1186 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII------VNGVQPPTLNKKLRVLVDFSS 1239
            L  +  KIE+A PGF+N+FL R +  E+++  +      V  V+P T      ++VD+S+
Sbjct: 24   LTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGVAPVEPQT------IVVDYSA 77

Query: 1240 PNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL 1299
            PN+AK+MHVGHLRSTIIGD   R L +LGH+V+R NHVGDWGTQFGMLIA+L+ K  +  
Sbjct: 78   PNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAYLE-KMQNEN 136

Query: 1300 TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQ 1359
                 ++DL+ FY+++KK +DEDE F  RA   VV LQ  D   ++ W  + D++    Q
Sbjct: 137  ASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQ 196

Query: 1360 KIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDR 1408
              YDRLNVTLT+    GES Y   + ++V  L+ KGL    +G  +++        GE  
Sbjct: 197  VAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKGLAVESEGATVVYLDEYKNKDGEPM 256

Query: 1409 GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            G I   I K DGG+ Y T+D+A  + R E   AD I+Y  D R +  ++Q
Sbjct: 257  GVI---IQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQ 303


>gi|429110753|ref|ZP_19172523.1| Arginyl-tRNA synthetase [Cronobacter malonaticus 507]
 gi|426311910|emb|CCJ98636.1| Arginyl-tRNA synthetase [Cronobacter malonaticus 507]
          Length = 577

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDEYCREMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLSELLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 375  GKDGKPFKTRAGGTIKLSELLDEALDRARRLVAEKN--PDMPADELEKLANAVGIGAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AG+   +L     + PV 
Sbjct: 433  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGVQESEL-----TAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            ++ ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + +  
Sbjct: 488  IQDDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILTAETD-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA  TAK +K   D L I T
Sbjct: 546  --ALRQSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 190/334 (56%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y RLNVTLT     G
Sbjct: 199 KHYDEDEAFAERARSYVVKLQGGDEYCREMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 349



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 189/333 (56%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDEYCREMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 348


>gi|385850923|ref|YP_005897438.1| arginyl-tRNA synthetase [Neisseria meningitidis M04-240196]
 gi|325205746|gb|ADZ01199.1| arginyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 572

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 319/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R  G    D        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKTGEWDAD-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|416182448|ref|ZP_11612074.1| arginyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|416215311|ref|ZP_11623305.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325134676|gb|EGC57316.1| arginyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325143433|gb|EGC65760.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 572

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 319/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R  G    D        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKTGEWDAD-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  220 bits (561), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|15677359|ref|NP_274514.1| arginyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|385852886|ref|YP_005899400.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|416196043|ref|ZP_11617979.1| arginyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|427826142|ref|ZP_18993203.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|433465459|ref|ZP_20422938.1| arginine--tRNA ligase [Neisseria meningitidis NM422]
 gi|433487900|ref|ZP_20445069.1| arginine--tRNA ligase [Neisseria meningitidis M13255]
 gi|433490846|ref|ZP_20447965.1| arginine--tRNA ligase [Neisseria meningitidis NM418]
 gi|433507500|ref|ZP_20464405.1| arginine--tRNA ligase [Neisseria meningitidis 9757]
 gi|433509134|ref|ZP_20466006.1| arginine--tRNA ligase [Neisseria meningitidis 12888]
 gi|433511709|ref|ZP_20468529.1| arginine--tRNA ligase [Neisseria meningitidis 4119]
 gi|23822209|sp|Q9JYM8.1|SYR_NEIMB RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|7226749|gb|AAF41862.1| arginyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316986039|gb|EFV64976.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140638|gb|EGC63156.1| arginyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199890|gb|ADY95345.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|432202114|gb|ELK58179.1| arginine--tRNA ligase [Neisseria meningitidis NM422]
 gi|432224931|gb|ELK80693.1| arginine--tRNA ligase [Neisseria meningitidis M13255]
 gi|432226612|gb|ELK82338.1| arginine--tRNA ligase [Neisseria meningitidis NM418]
 gi|432240517|gb|ELK96052.1| arginine--tRNA ligase [Neisseria meningitidis 9757]
 gi|432246356|gb|ELL01807.1| arginine--tRNA ligase [Neisseria meningitidis 4119]
 gi|432247307|gb|ELL02745.1| arginine--tRNA ligase [Neisseria meningitidis 12888]
          Length = 572

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 320/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P      F+GFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFIGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFIGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  221 bits (562), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|443288178|ref|ZP_21027272.1| Arginyl-tRNA synthetase [Micromonospora lupini str. Lupac 08]
 gi|385881755|emb|CCH22365.1| Arginyl-tRNA synthetase [Micromonospora lupini str. Lupac 08]
          Length = 572

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/564 (40%), Positives = 321/564 (56%), Gaps = 40/564 (7%)

Query: 516  DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 575
            DFQ + A+AL +        + P DIA        +E+     LA V  + EV+ PGF+N
Sbjct: 34   DFQSDAALALARRLG-----RPPRDIA--------AEVLEQAELADVCSRAEVSGPGFLN 80

Query: 576  VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            + ++       +  + V+   GV  P   +   V+VD+S+PN+AKEMHVGHLRST+IGD 
Sbjct: 81   LTVADQALAGLVAALAVDRRLGV--PVAVEPETVVVDYSAPNVAKEMHVGHLRSTVIGDA 138

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
             +RLLE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL  FYK ++ +F
Sbjct: 139  AARLLEWLGHRVLRANHLGDWGTPFGMLIEHLADLGEAEAAQELSMGDLDTFYKAARAKF 198

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            D DE F +R+   VVALQ  DP   + W ++ + S R F  +YD L+VTL+ER   GES 
Sbjct: 199  DADEAFAERSRLRVVALQGGDPVTLRLWRLLVEQSERYFMTVYDLLDVTLSERDFHGESS 258

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L++  LL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259  YNGLLGPVVEELDRLRLLRESDGAACVFPPGSVGRDGEPLPLIVRKSDGGYGYAATDLAA 318

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            IR+R     A  ++YV  L Q  HF ++   A +AG L P   R + VGFG +LG D + 
Sbjct: 319  IRRRTGALGATRLLYVVGLPQRRHFEMVYAVAAQAGWLAP-PARAEHVGFGSILGSDGRM 377

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
             ++R+G +VKL  LL+E + R+    +++N   EL   E +E  +AV  G IKYADLS++
Sbjct: 378  LRSRAGGSVKLVGLLEEAITRATALARERN--PELGEAEAAEVGRAVGIGAIKYADLSND 435

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            RN DYV  +++ML   GNTA YL YAY+RI SI R AG+       A     VSL    E
Sbjct: 436  RNRDYVLDWERMLSLDGNTAPYLQYAYSRIGSIFRRAGV------AARPDAAVSLAEPAE 489

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  L+    V+  V  +L  H+L  YLY ++ AFS FY+ C  +  D     + V  
Sbjct: 490  RALAFELVGFGRVVGEVADNLEFHNLAGYLYRLAAAFSTFYERCPVLRAD-----EPVRE 544

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL+L + TA+V+++   +L IRT
Sbjct: 545  SRLVLCDLTARVLRQGLHLLGIRT 568



 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 190/334 (56%), Gaps = 28/334 (8%)

Query: 126 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 185
           DFQ + A+AL +        + P DIA        +E+     LA V  + EV+ PGF+N
Sbjct: 34  DFQSDAALALARRLG-----RPPRDIA--------AEVLEQAELADVCSRAEVSGPGFLN 80

Query: 186 VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           + ++       +  + V+   GV  P   +   V+VD+S+PN+AKEMHVGHLRST+IGD 
Sbjct: 81  LTVADQALAGLVAALAVDRRLGV--PVAVEPETVVVDYSAPNVAKEMHVGHLRSTVIGDA 138

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
            +RLLE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL  FYK ++ +F
Sbjct: 139 AARLLEWLGHRVLRANHLGDWGTPFGMLIEHLADLGEAEAAQELSMGDLDTFYKAARAKF 198

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           D DE F +R+   VVALQ  DP   + W ++ + S R F  +YD L+VTL+ER   GES 
Sbjct: 199 DADEAFAERSRLRVVALQGGDPVTLRLWRLLVEQSERYFMTVYDLLDVTLSERDFHGESS 258

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L++  LL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259 YNGLLGPVVEELDRLRLLRESDGAACVFPPGSVGRDGEPLPLIVRKSDGGYGYAATDLAA 318

Query: 415 IRQRIEEEKADWIVYVTD--HRSYHQVLQAIAEE 446
           IR+R     A  ++YV     R + +++ A+A +
Sbjct: 319 IRRRTGALGATRLLYVVGLPQRRHFEMVYAVAAQ 352



 Score =  216 bits (551), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 181/317 (57%), Gaps = 26/317 (8%)

Query: 1143 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 1202
            DFQ + A+AL +        + P DIA        +E+     LA V  + EV+ PGF+N
Sbjct: 34   DFQSDAALALARRLG-----RPPRDIA--------AEVLEQAELADVCSRAEVSGPGFLN 80

Query: 1203 VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            + ++       +  + V+   GV  P   +   V+VD+S+PN+AKEMHVGHLRST+IGD 
Sbjct: 81   LTVADQALAGLVAALAVDRRLGV--PVAVEPETVVVDYSAPNVAKEMHVGHLRSTVIGDA 138

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
             +RLLE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL  FYK ++ +F
Sbjct: 139  AARLLEWLGHRVLRANHLGDWGTPFGMLIEHLADLGEAEAAQELSMGDLDTFYKAARAKF 198

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            D DE F +R+   VVALQ  DP   + W ++ + S R F  +YD L+VTL+ER   GES 
Sbjct: 199  DADEAFAERSRLRVVALQGGDPVTLRLWRLLVEQSERYFMTVYDLLDVTLSERDFHGESS 258

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L++  LL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259  YNGLLGPVVEELDRLRLLRESDGAACVFPPGSVGRDGEPLPLIVRKSDGGYGYAATDLAA 318

Query: 1432 IRQRIEEEKADWIVYVT 1448
            IR+R     A  ++YV 
Sbjct: 319  IRRRTGALGATRLLYVV 335


>gi|261377586|ref|ZP_05982159.1| arginine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269146334|gb|EEZ72752.1| arginine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 572

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/561 (42%), Positives = 319/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+LE++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFIGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ E+     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R RI   KAD ++YV D  Q +HF  L   ++KA  L P   + +F+GFG ++G+D K F
Sbjct: 321  RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKASYL-PEDAKAEFIGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E  +  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAEKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R AG    D  V     P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAG--EWDTTV-----PTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  +EG  +     
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--SEGATR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  ++L I
Sbjct: 546  RLQLAKLTGDTLKQGLELLGI 566



 Score =  230 bits (586), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 157/416 (37%), Positives = 216/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+LE++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLEFIGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ E+     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R RI   KAD ++YV DHR      Q      K   +   + ++  G    M     P +
Sbjct: 321 RYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKASYLPEDAKAEFIGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+   +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAEKIGKTVGIGAVKYADLSKN 436



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 136/319 (42%), Positives = 185/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+LE++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFIGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ E+     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R RI   KAD ++YV DHR
Sbjct: 321  RYRIGRLKADRLLYVVDHR 339


>gi|433657115|ref|YP_007274494.1| Arginyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
 gi|432507803|gb|AGB09320.1| Arginyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
          Length = 577

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 319/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLCEEFLAKQADAALADSRLGVAAEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  ++L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDELQ-----GDIQITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 190/328 (57%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLCEEFLAKQADAALADSRLGVAAEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELGADRVLYFIDSRQHQHLMQA 349



 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 189/327 (57%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLCEEFLAKQADAALADSRLGVAAEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL   DDG ++++ E     D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKAQGLAVEDDGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELGADRVLYFIDSRQHQHLMQ 348


>gi|421544823|ref|ZP_15990895.1| arginine--tRNA ligase [Neisseria meningitidis NM140]
 gi|421546908|ref|ZP_15992949.1| arginine--tRNA ligase [Neisseria meningitidis NM183]
 gi|421549157|ref|ZP_15995175.1| arginine--tRNA ligase [Neisseria meningitidis NM2781]
 gi|421552265|ref|ZP_15998244.1| arginine--tRNA ligase [Neisseria meningitidis NM576]
 gi|402322384|gb|EJU57846.1| arginine--tRNA ligase [Neisseria meningitidis NM183]
 gi|402322616|gb|EJU58068.1| arginine--tRNA ligase [Neisseria meningitidis NM140]
 gi|402324547|gb|EJU59979.1| arginine--tRNA ligase [Neisseria meningitidis NM2781]
 gi|402332418|gb|EJU67745.1| arginine--tRNA ligase [Neisseria meningitidis NM576]
          Length = 572

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 319/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    D        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAD-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/418 (37%), Positives = 217/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|418290935|ref|ZP_12903018.1| arginyl-tRNA synthetase [Neisseria meningitidis NM220]
 gi|372200742|gb|EHP14771.1| arginyl-tRNA synthetase [Neisseria meningitidis NM220]
          Length = 572

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/563 (42%), Positives = 320/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +Y+ L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    D  V     P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAG--EWDATV-----PTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGATR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  226 bits (576), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 157/418 (37%), Positives = 217/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLARNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +Y+ L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +Y+ L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|421542795|ref|ZP_15988900.1| arginine--tRNA ligase [Neisseria meningitidis NM255]
 gi|402316592|gb|EJU52135.1| arginine--tRNA ligase [Neisseria meningitidis NM255]
          Length = 572

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 238/563 (42%), Positives = 318/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGV--AKTDKPKTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R RI   KAD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    D        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAD-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY  +T FS FY+ C  ++  +EG  +   
Sbjct: 489  EKQLAADLLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEACPILK--SEGATR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/418 (37%), Positives = 217/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLARNIQTALNDARFGV--AKTDKPKTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R RI   KAD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  220 bits (561), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGV--AKTDKPKTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R RI   KAD ++YV DHR
Sbjct: 319  CLRYRIGRLKADRLLYVVDHR 339


>gi|379741897|ref|YP_005333866.1| arginyl-tRNA synthetase [Vibrio cholerae IEC224]
 gi|417814112|ref|ZP_12460765.1| arginyl-tRNA synthetase [Vibrio cholerae HC-49A2]
 gi|417817850|ref|ZP_12464479.1| arginyl-tRNA synthetase [Vibrio cholerae HCUF01]
 gi|418335092|ref|ZP_12944005.1| arginyl-tRNA synthetase [Vibrio cholerae HC-06A1]
 gi|418338704|ref|ZP_12947598.1| arginyl-tRNA synthetase [Vibrio cholerae HC-23A1]
 gi|418346627|ref|ZP_12951387.1| arginyl-tRNA synthetase [Vibrio cholerae HC-28A1]
 gi|418350386|ref|ZP_12955117.1| arginyl-tRNA synthetase [Vibrio cholerae HC-43A1]
 gi|418356154|ref|ZP_12958873.1| arginyl-tRNA synthetase [Vibrio cholerae HC-61A1]
 gi|419827045|ref|ZP_14350544.1| arginine--tRNA ligase [Vibrio cholerae CP1033(6)]
 gi|421317890|ref|ZP_15768458.1| arginyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
 gi|421321840|ref|ZP_15772393.1| arginyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
 gi|421325642|ref|ZP_15776166.1| arginyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
 gi|421329302|ref|ZP_15779812.1| arginyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
 gi|421333209|ref|ZP_15783686.1| arginyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
 gi|421336799|ref|ZP_15787260.1| arginyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
 gi|421340226|ref|ZP_15790658.1| arginyl-tRNA synthetase [Vibrio cholerae HC-20A2]
 gi|421347959|ref|ZP_15798336.1| arginyl-tRNA synthetase [Vibrio cholerae HC-46A1]
 gi|422897181|ref|ZP_16934628.1| arginyl-tRNA synthetase [Vibrio cholerae HC-40A1]
 gi|422903377|ref|ZP_16938351.1| arginyl-tRNA synthetase [Vibrio cholerae HC-48A1]
 gi|422907260|ref|ZP_16942063.1| arginyl-tRNA synthetase [Vibrio cholerae HC-70A1]
 gi|422914109|ref|ZP_16948615.1| arginyl-tRNA synthetase [Vibrio cholerae HFU-02]
 gi|422926313|ref|ZP_16959327.1| arginyl-tRNA synthetase [Vibrio cholerae HC-38A1]
 gi|423145637|ref|ZP_17133231.1| arginyl-tRNA synthetase [Vibrio cholerae HC-19A1]
 gi|423150312|ref|ZP_17137626.1| arginyl-tRNA synthetase [Vibrio cholerae HC-21A1]
 gi|423154130|ref|ZP_17141311.1| arginyl-tRNA synthetase [Vibrio cholerae HC-22A1]
 gi|423157214|ref|ZP_17144307.1| arginyl-tRNA synthetase [Vibrio cholerae HC-32A1]
 gi|423160784|ref|ZP_17147724.1| arginyl-tRNA synthetase [Vibrio cholerae HC-33A2]
 gi|423165609|ref|ZP_17152335.1| arginyl-tRNA synthetase [Vibrio cholerae HC-48B2]
 gi|423731624|ref|ZP_17704927.1| arginine--tRNA ligase [Vibrio cholerae HC-17A1]
 gi|423768908|ref|ZP_17713054.1| arginine--tRNA ligase [Vibrio cholerae HC-50A2]
 gi|423895511|ref|ZP_17727258.1| arginine--tRNA ligase [Vibrio cholerae HC-62A1]
 gi|423930948|ref|ZP_17731651.1| arginine--tRNA ligase [Vibrio cholerae HC-77A1]
 gi|424003063|ref|ZP_17746138.1| arginine--tRNA ligase [Vibrio cholerae HC-17A2]
 gi|424006852|ref|ZP_17749822.1| arginine--tRNA ligase [Vibrio cholerae HC-37A1]
 gi|424024835|ref|ZP_17764486.1| arginine--tRNA ligase [Vibrio cholerae HC-62B1]
 gi|424027719|ref|ZP_17767322.1| arginine--tRNA ligase [Vibrio cholerae HC-69A1]
 gi|424586996|ref|ZP_18026575.1| arginyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
 gi|424595645|ref|ZP_18034965.1| arginyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
 gi|424599563|ref|ZP_18038742.1| arginyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
 gi|424602283|ref|ZP_18041424.1| arginyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
 gi|424607255|ref|ZP_18046197.1| arginyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
 gi|424611077|ref|ZP_18049916.1| arginyl-tRNA synthetase [Vibrio cholerae HC-39A1]
 gi|424613888|ref|ZP_18052676.1| arginyl-tRNA synthetase [Vibrio cholerae HC-41A1]
 gi|424617864|ref|ZP_18056536.1| arginyl-tRNA synthetase [Vibrio cholerae HC-42A1]
 gi|424622648|ref|ZP_18061153.1| arginyl-tRNA synthetase [Vibrio cholerae HC-47A1]
 gi|424645612|ref|ZP_18083348.1| arginyl-tRNA synthetase [Vibrio cholerae HC-56A2]
 gi|424653379|ref|ZP_18090759.1| arginyl-tRNA synthetase [Vibrio cholerae HC-57A2]
 gi|424657201|ref|ZP_18094486.1| arginyl-tRNA synthetase [Vibrio cholerae HC-81A2]
 gi|443504431|ref|ZP_21071389.1| arginyl-tRNA synthetase [Vibrio cholerae HC-64A1]
 gi|443508332|ref|ZP_21075094.1| arginyl-tRNA synthetase [Vibrio cholerae HC-65A1]
 gi|443512176|ref|ZP_21078813.1| arginyl-tRNA synthetase [Vibrio cholerae HC-67A1]
 gi|443515729|ref|ZP_21082240.1| arginyl-tRNA synthetase [Vibrio cholerae HC-68A1]
 gi|443519522|ref|ZP_21085918.1| arginyl-tRNA synthetase [Vibrio cholerae HC-71A1]
 gi|443524413|ref|ZP_21090626.1| arginyl-tRNA synthetase [Vibrio cholerae HC-72A2]
 gi|443532009|ref|ZP_21098023.1| arginyl-tRNA synthetase [Vibrio cholerae HC-7A1]
 gi|443535812|ref|ZP_21101688.1| arginyl-tRNA synthetase [Vibrio cholerae HC-80A1]
 gi|443539352|ref|ZP_21105206.1| arginyl-tRNA synthetase [Vibrio cholerae HC-81A1]
 gi|31077163|sp|Q9KQC6.3|SYR_VIBCH RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|340036598|gb|EGQ97574.1| arginyl-tRNA synthetase [Vibrio cholerae HC-49A2]
 gi|340037573|gb|EGQ98548.1| arginyl-tRNA synthetase [Vibrio cholerae HCUF01]
 gi|341620821|gb|EGS46575.1| arginyl-tRNA synthetase [Vibrio cholerae HC-48A1]
 gi|341621020|gb|EGS46772.1| arginyl-tRNA synthetase [Vibrio cholerae HC-70A1]
 gi|341621734|gb|EGS47469.1| arginyl-tRNA synthetase [Vibrio cholerae HC-40A1]
 gi|341637012|gb|EGS61704.1| arginyl-tRNA synthetase [Vibrio cholerae HFU-02]
 gi|341646095|gb|EGS70213.1| arginyl-tRNA synthetase [Vibrio cholerae HC-38A1]
 gi|356417116|gb|EHH70735.1| arginyl-tRNA synthetase [Vibrio cholerae HC-06A1]
 gi|356418019|gb|EHH71626.1| arginyl-tRNA synthetase [Vibrio cholerae HC-21A1]
 gi|356422475|gb|EHH75949.1| arginyl-tRNA synthetase [Vibrio cholerae HC-19A1]
 gi|356428113|gb|EHH81342.1| arginyl-tRNA synthetase [Vibrio cholerae HC-22A1]
 gi|356430346|gb|EHH83555.1| arginyl-tRNA synthetase [Vibrio cholerae HC-23A1]
 gi|356432932|gb|EHH86127.1| arginyl-tRNA synthetase [Vibrio cholerae HC-28A1]
 gi|356439488|gb|EHH92457.1| arginyl-tRNA synthetase [Vibrio cholerae HC-32A1]
 gi|356444882|gb|EHH97691.1| arginyl-tRNA synthetase [Vibrio cholerae HC-43A1]
 gi|356445301|gb|EHH98108.1| arginyl-tRNA synthetase [Vibrio cholerae HC-33A2]
 gi|356450630|gb|EHI03347.1| arginyl-tRNA synthetase [Vibrio cholerae HC-48B2]
 gi|356452652|gb|EHI05331.1| arginyl-tRNA synthetase [Vibrio cholerae HC-61A1]
 gi|378795407|gb|AFC58878.1| arginyl-tRNA synthetase [Vibrio cholerae IEC224]
 gi|395916148|gb|EJH26978.1| arginyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
 gi|395917480|gb|EJH28308.1| arginyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
 gi|395918834|gb|EJH29658.1| arginyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
 gi|395927836|gb|EJH38599.1| arginyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
 gi|395928611|gb|EJH39364.1| arginyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
 gi|395931898|gb|EJH42642.1| arginyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
 gi|395939509|gb|EJH50191.1| arginyl-tRNA synthetase [Vibrio cholerae HC-20A2]
 gi|395942538|gb|EJH53214.1| arginyl-tRNA synthetase [Vibrio cholerae HC-46A1]
 gi|395958463|gb|EJH68947.1| arginyl-tRNA synthetase [Vibrio cholerae HC-56A2]
 gi|395959028|gb|EJH69477.1| arginyl-tRNA synthetase [Vibrio cholerae HC-57A2]
 gi|395961975|gb|EJH72284.1| arginyl-tRNA synthetase [Vibrio cholerae HC-42A1]
 gi|395970570|gb|EJH80317.1| arginyl-tRNA synthetase [Vibrio cholerae HC-47A1]
 gi|395972993|gb|EJH82567.1| arginyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
 gi|395975429|gb|EJH84920.1| arginyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
 gi|408006862|gb|EKG44978.1| arginyl-tRNA synthetase [Vibrio cholerae HC-39A1]
 gi|408012445|gb|EKG50223.1| arginyl-tRNA synthetase [Vibrio cholerae HC-41A1]
 gi|408031775|gb|EKG68380.1| arginyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
 gi|408041309|gb|EKG77423.1| arginyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
 gi|408042719|gb|EKG78756.1| arginyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
 gi|408052855|gb|EKG87879.1| arginyl-tRNA synthetase [Vibrio cholerae HC-81A2]
 gi|408607835|gb|EKK81238.1| arginine--tRNA ligase [Vibrio cholerae CP1033(6)]
 gi|408622995|gb|EKK95954.1| arginine--tRNA ligase [Vibrio cholerae HC-17A1]
 gi|408633575|gb|EKL05904.1| arginine--tRNA ligase [Vibrio cholerae HC-50A2]
 gi|408654380|gb|EKL25522.1| arginine--tRNA ligase [Vibrio cholerae HC-77A1]
 gi|408655311|gb|EKL26436.1| arginine--tRNA ligase [Vibrio cholerae HC-62A1]
 gi|408845460|gb|EKL85576.1| arginine--tRNA ligase [Vibrio cholerae HC-37A1]
 gi|408845597|gb|EKL85712.1| arginine--tRNA ligase [Vibrio cholerae HC-17A2]
 gi|408870405|gb|EKM09685.1| arginine--tRNA ligase [Vibrio cholerae HC-62B1]
 gi|408879022|gb|EKM18015.1| arginine--tRNA ligase [Vibrio cholerae HC-69A1]
 gi|443431376|gb|ELS73928.1| arginyl-tRNA synthetase [Vibrio cholerae HC-64A1]
 gi|443434952|gb|ELS81097.1| arginyl-tRNA synthetase [Vibrio cholerae HC-65A1]
 gi|443438778|gb|ELS88494.1| arginyl-tRNA synthetase [Vibrio cholerae HC-67A1]
 gi|443443139|gb|ELS96441.1| arginyl-tRNA synthetase [Vibrio cholerae HC-68A1]
 gi|443446940|gb|ELT03596.1| arginyl-tRNA synthetase [Vibrio cholerae HC-71A1]
 gi|443449747|gb|ELT10038.1| arginyl-tRNA synthetase [Vibrio cholerae HC-72A2]
 gi|443457399|gb|ELT24796.1| arginyl-tRNA synthetase [Vibrio cholerae HC-7A1]
 gi|443461000|gb|ELT32075.1| arginyl-tRNA synthetase [Vibrio cholerae HC-80A1]
 gi|443465452|gb|ELT40112.1| arginyl-tRNA synthetase [Vibrio cholerae HC-81A1]
          Length = 577

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLALLGIDT 573



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|429087062|ref|ZP_19149794.1| Arginyl-tRNA synthetase [Cronobacter universalis NCTC 9529]
 gi|426506865|emb|CCK14906.1| Arginyl-tRNA synthetase [Cronobacter universalis NCTC 9529]
          Length = 577

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 322/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D   +  W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDEYCRDMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLSELLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 375  GKDGKPFKTRAGGTIKLSELLDEALDRARRLVAEKN--PDMPADELEKLANAVGIGAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AG+   +L     + PV 
Sbjct: 433  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGVQESEL-----TAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            ++ ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + +  
Sbjct: 488  IQDDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILTAETD-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA  TAK +K   D L I T
Sbjct: 546  --ALRQSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 189/334 (56%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D   +  W  + D++    Q  Y RLNVTLT     G
Sbjct: 199 KHYDEDEAFAERARSYVVKLQGGDEYCRDMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 349



 Score =  223 bits (567), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 188/333 (56%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D   +  W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDEYCRDMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 348


>gi|333909590|ref|YP_004483176.1| arginyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
 gi|333479596|gb|AEF56257.1| Arginyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
          Length = 577

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/597 (37%), Positives = 338/597 (56%), Gaps = 35/597 (5%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  +    +Q A    G    + A T +    +FGD+Q N  M + K  K      NP +
Sbjct: 3    IQTLLNQRIQAAMVAAGAPETAPALTRQSAKVQFGDYQANGIMGVAKSLK-----MNPRE 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPPT 599
            +AQ +   +         L+ + +K+E+A PGF+N+FL   + G+++  +  +  +  P+
Sbjct: 58   LAQKVVDGL--------DLSDIAEKVEIAGPGFINIFLKNAWLGKELVALRQSERLDVPS 109

Query: 600  LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
            +     V+VD+SSPN+AKEMHVGHLRST+IGD + R LE+LGH VVR NHVGDWGTQFGM
Sbjct: 110  VAAPETVVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHRVVRQNHVGDWGTQFGM 169

Query: 660  LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 719
            L+A+++    +    S  ++DL+ FY+ +K  FD+D  F  RA + VVALQ  D D    
Sbjct: 170  LLAYMERLRSEKAEISMALSDLETFYRTAKTCFDDDAGFADRARELVVALQSGDKDCLAL 229

Query: 720  WEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIM 776
            W+   D+S    ++ Y  L V+L  +    ES Y   ++ +V  L ++ LL+ D G + +
Sbjct: 230  WDEFIDISLTHCEETYKMLGVSLERQHVMPESAYNDDLQNVVNELTEQNLLKEDQGAQCV 289

Query: 777  WGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
            + E+     G I P+ + K+ GGF Y T+DLAA+R R    +A+ ++Y  D  Q +HF+ 
Sbjct: 290  FLEEFANKEGEITPIIVQKTGGGFLYSTTDLAAVRFRQHTLEANRVLYFVDARQSLHFQQ 349

Query: 832  LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
            +   ++KAG + P +T+++ + FG V+G D K FKTRSG   KLS LL+E   R+   + 
Sbjct: 350  IFTLSRKAGFVKP-ETQLEHMPFGTVMGSDGKPFKTRSGGVAKLSSLLEEAQERAYQLVS 408

Query: 892  DKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
             KN   +++  EL    + V    +KYADLS NR  DYVF++D ML   GNTA YLLYAY
Sbjct: 409  SKN--PDMSEEELRNISRVVGIASVKYADLSKNRTSDYVFNWDTMLSFEGNTAPYLLYAY 466

Query: 952  TRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
            +R+ASI + +     ++ VA+ +  + +E  +E ALA  L +  + +  V  D   H LC
Sbjct: 467  SRVASIVKRS-----EMDVASLTGEIKVEASQERALAMKLCQFEEAIQQVANDGMPHFLC 521

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             YLY+++  F  FY+ C  +  +AE  +K     RL LA  TA  ++    +L I T
Sbjct: 522  AYLYELAGTFMTFYEACPIL--NAEEDVK---NSRLQLALNTASTLQLGLSLLGIET 573



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/372 (36%), Positives = 207/372 (55%), Gaps = 25/372 (6%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  +    +Q A    G    + A T +    +FGD+Q N  M + K  K      NP +
Sbjct: 3   IQTLLNQRIQAAMVAAGAPETAPALTRQSAKVQFGDYQANGIMGVAKSLK-----MNPRE 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPPT 209
           +AQ +   +         L+ + +K+E+A PGF+N+FL   + G+++  +  +  +  P+
Sbjct: 58  LAQKVVDGL--------DLSDIAEKVEIAGPGFINIFLKNAWLGKELVALRQSERLDVPS 109

Query: 210 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
           +     V+VD+SSPN+AKEMHVGHLRST+IGD + R LE+LGH VVR NHVGDWGTQFGM
Sbjct: 110 VAAPETVVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHRVVRQNHVGDWGTQFGM 169

Query: 270 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 329
           L+A+++    +    S  ++DL+ FY+ +K  FD+D  F  RA + VVALQ  D D    
Sbjct: 170 LLAYMERLRSEKAEISMALSDLETFYRTAKTCFDDDAGFADRARELVVALQSGDKDCLAL 229

Query: 330 WEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIM 386
           W+   D+S    ++ Y  L V+L  +    ES Y   ++ +V  L ++ LL+ D G + +
Sbjct: 230 WDEFIDISLTHCEETYKMLGVSLERQHVMPESAYNDDLQNVVNELTEQNLLKEDQGAQCV 289

Query: 387 WGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR-SYHQVL 440
           + E+     G I P+ + K+ GGF Y T+DLAA+R R    +A+ ++Y  D R S H   
Sbjct: 290 FLEEFANKEGEITPIIVQKTGGGFLYSTTDLAAVRFRQHTLEANRVLYFVDARQSLH--F 347

Query: 441 QAIAEEEKKQGI 452
           Q I    +K G 
Sbjct: 348 QQIFTLSRKAGF 359



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/353 (36%), Positives = 200/353 (56%), Gaps = 22/353 (6%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  +    +Q A    G    + A T +    +FGD+Q N  M + K  K      NP +
Sbjct: 3    IQTLLNQRIQAAMVAAGAPETAPALTRQSAKVQFGDYQANGIMGVAKSLK-----MNPRE 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG-VQPPT 1226
            +AQ +   +         L+ + +K+E+A PGF+N+FL   + G+++  +  +  +  P+
Sbjct: 58   LAQKVVDGL--------DLSDIAEKVEIAGPGFINIFLKNAWLGKELVALRQSERLDVPS 109

Query: 1227 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
            +     V+VD+SSPN+AKEMHVGHLRST+IGD + R LE+LGH VVR NHVGDWGTQFGM
Sbjct: 110  VAAPETVVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHRVVRQNHVGDWGTQFGM 169

Query: 1287 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 1346
            L+A+++    +    S  ++DL+ FY+ +K  FD+D  F  RA + VVALQ  D D    
Sbjct: 170  LLAYMERLRSEKAEISMALSDLETFYRTAKTCFDDDAGFADRARELVVALQSGDKDCLAL 229

Query: 1347 WEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDDGRKIM 1403
            W+   D+S    ++ Y  L V+L  +    ES Y   ++ +V  L ++ LL+ D G + +
Sbjct: 230  WDEFIDISLTHCEETYKMLGVSLERQHVMPESAYNDDLQNVVNELTEQNLLKEDQGAQCV 289

Query: 1404 WGED----RGSI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            + E+     G I P+ + K+ GGF Y T+DLAA+R R    +A+ ++Y  D R
Sbjct: 290  FLEEFANKEGEITPIIVQKTGGGFLYSTTDLAAVRFRQHTLEANRVLYFVDAR 342


>gi|262167694|ref|ZP_06035397.1| arginyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262023899|gb|EEY42597.1| arginyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 592

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 96

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKNIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 395

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 396  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 453

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 454  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 508

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 509  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 564

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 565  SRLKLAALTAKTIKQGLALLGIDT 588



 Score =  240 bits (612), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 96

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97  FINIFLSEEFLAAQAEAALADARLGVAQEAPKNIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 337 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 396

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 397 KTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 450



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 96

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKNIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQ 363


>gi|429092301|ref|ZP_19154939.1| Arginyl-tRNA synthetase [Cronobacter dublinensis 1210]
 gi|426742963|emb|CCJ81052.1| Arginyl-tRNA synthetase [Cronobacter dublinensis 1210]
          Length = 577

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/570 (39%), Positives = 322/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQAMAHL---------DLTGIAAKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIV---NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  +     GV+   +     ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVEAAVTCDRAGVE--KMAAPQTIVVDYSAPNVAKEMHVGHLRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            K +DEDE F  RA   VV LQ  D   ++ W  + D++    Q  Y+RLNVTLT +   G
Sbjct: 199  KHYDEDEAFAARARSYVVKLQGGDEYCREMWRKLVDITMAQNQITYERLNVTLTRKDVMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLSELLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 375  GKDGKPFKTRAGGTIKLSELLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AG+   +L     + PV 
Sbjct: 433  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGVAESEL-----TAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            ++ ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + +  
Sbjct: 488  IQDDREAQLAARLLQFEETLSVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAETD-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA  TA+ +K   + L I T
Sbjct: 546  --ALRQSRLKLALLTARTLKLGLETLGIET 573



 Score =  226 bits (576), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 189/334 (56%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAIAKKL---GMPPRQF-AEQAMAHL---------DLTGIAAKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIV---NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  +     GV+   +     ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82  FINIFLDPAFLAQHVEAAVTCDRAGVE--KMAAPQTIVVDYSAPNVAKEMHVGHLRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140 GDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           K +DEDE F  RA   VV LQ  D   ++ W  + D++    Q  Y+RLNVTLT +   G
Sbjct: 199 KHYDEDEAFAARARSYVVKLQGGDEYCREMWRKLVDITMAQNQITYERLNVTLTRKDVMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 349



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 188/333 (56%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQAMAHL---------DLTGIAAKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIV---NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  +     GV+   +     ++VD+S+PN+AKEMHVGHLRSTII
Sbjct: 82   FINIFLDPAFLAQHVEAAVTCDRAGVE--KMAAPQTIVVDYSAPNVAKEMHVGHLRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH+V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            K +DEDE F  RA   VV LQ  D   ++ W  + D++    Q  Y+RLNVTLT +   G
Sbjct: 199  KHYDEDEAFAARARSYVVKLQGGDEYCREMWRKLVDITMAQNQITYERLNVTLTRKDVMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 348


>gi|85059226|ref|YP_454928.1| arginyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|109895037|sp|Q2NTK2.1|SYR_SODGM RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|84779746|dbj|BAE74523.1| arginyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 576

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/600 (38%), Positives = 331/600 (55%), Gaps = 48/600 (8%)

Query: 484  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 543
            + +  +Q A    G      A   +    +FGD+Q N  MA+ K          P  +A+
Sbjct: 6    LLSEKIQQALVAAGAPADCEAQVRQSAKAQFGDYQANGVMAIAKQLG-----LPPRKLAE 60

Query: 544  SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN-- 601
            ++  ++        +L  +  K+++A PGF+N+FL   +    + + +   +  P L   
Sbjct: 61   NVVGLL--------NLDGIARKVDIAGPGFINIFLEPSW----LANHLAAALSSPRLGIA 108

Query: 602  --KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
                  ++VD+S+PN+AKEMHVGH+RSTIIGD   R L +LGH+V+R NHVGDWGTQFGM
Sbjct: 109  SVASQTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLSFLGHNVIRANHVGDWGTQFGM 168

Query: 660  LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 719
            LIA+L +K  D       ++ L++FY+ +K+ +DED  F +RA   VV LQ  D   ++ 
Sbjct: 169  LIAYL-EKVQDGGEAEMQLSSLESFYRAAKQHYDEDPAFAERARGYVVKLQGGDEYCRQM 227

Query: 720  WEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIM 776
            W  + DV+    QK Y+RLNVTLT     GES Y   +  +V  L+ KGL    +G  ++
Sbjct: 228  WRKLVDVTMAQNQKTYNRLNVTLTRADVMGESLYNDMLPGIVADLKAKGLAVESEGATVV 287

Query: 777  W--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            +        GE  G I   I K DG + Y T+D+A  + R E  KAD I+Y  D  Q  H
Sbjct: 288  FLDEFKNKEGEPMGVI---IQKKDGAYLYTTTDIACAKYRYETLKADRIIYYIDSRQHQH 344

Query: 829  FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
              L     +KAG + P    ++   FG++LG+D K FKTR+G T+KL+ELLDE L R+  
Sbjct: 345  LMLAWTIVRKAGYV-PESVPLEHHMFGMMLGKDGKPFKTRAGGTIKLTELLDEALERARR 403

Query: 889  KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 948
             +  KN    +   EL+   Q V  G +KYADLS +R  DYVF +D ML   GNTA Y+ 
Sbjct: 404  LVAAKN--PSMDAGELARLAQVVGIGAVKYADLSKSRTTDYVFDWDNMLSFEGNTAPYMQ 461

Query: 949  YAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLH 1008
            YAYTR+ASI + +G + + L     +  + LE E+E  LA  LL++ + +  V RD   H
Sbjct: 462  YAYTRVASIFKRSGQDEQQL-----TGDIRLEAEQETQLAVRLLQLEEAIATVARDGTPH 516

Query: 1009 HLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             LC YLYD++  FS FY++C  +  +AE     +   RL LA  TA+ +KK  D+L I T
Sbjct: 517  VLCAYLYDLAVLFSAFYEHCPIL--NAEN--AALRQSRLQLALLTARTLKKGLDLLGIET 572



 Score =  219 bits (558), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/364 (35%), Positives = 195/364 (53%), Gaps = 36/364 (9%)

Query: 94  VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 153
           + +  +Q A    G      A   +    +FGD+Q N  MA+ K          P  +A+
Sbjct: 6   LLSEKIQQALVAAGAPADCEAQVRQSAKAQFGDYQANGVMAIAKQLG-----LPPRKLAE 60

Query: 154 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN-- 211
           ++  ++        +L  +  K+++A PGF+N+FL   +    + + +   +  P L   
Sbjct: 61  NVVGLL--------NLDGIARKVDIAGPGFINIFLEPSW----LANHLAAALSSPRLGIA 108

Query: 212 --KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
                 ++VD+S+PN+AKEMHVGH+RSTIIGD   R L +LGH+V+R NHVGDWGTQFGM
Sbjct: 109 SVASQTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLSFLGHNVIRANHVGDWGTQFGM 168

Query: 270 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 329
           LIA+L +K  D       ++ L++FY+ +K+ +DED  F +RA   VV LQ  D   ++ 
Sbjct: 169 LIAYL-EKVQDGGEAEMQLSSLESFYRAAKQHYDEDPAFAERARGYVVKLQGGDEYCRQM 227

Query: 330 WEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIM 386
           W  + DV+    QK Y+RLNVTLT     GES Y   +  +V  L+ KGL    +G  ++
Sbjct: 228 WRKLVDVTMAQNQKTYNRLNVTLTRADVMGESLYNDMLPGIVADLKAKGLAVESEGATVV 287

Query: 387 W--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
           +        GE  G I   I K DG + Y T+D+A  + R E  KAD I+Y  D R +  
Sbjct: 288 FLDEFKNKEGEPMGVI---IQKKDGAYLYTTTDIACAKYRYETLKADRIIYYIDSRQHQH 344

Query: 439 VLQA 442
           ++ A
Sbjct: 345 LMLA 348



 Score =  218 bits (556), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 194/362 (53%), Gaps = 36/362 (9%)

Query: 1111 VFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQ 1170
            + +  +Q A    G      A   +    +FGD+Q N  MA+ K          P  +A+
Sbjct: 6    LLSEKIQQALVAAGAPADCEAQVRQSAKAQFGDYQANGVMAIAKQLG-----LPPRKLAE 60

Query: 1171 SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN-- 1228
            ++  ++        +L  +  K+++A PGF+N+FL   +    + + +   +  P L   
Sbjct: 61   NVVGLL--------NLDGIARKVDIAGPGFINIFLEPSW----LANHLAAALSSPRLGIA 108

Query: 1229 --KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
                  ++VD+S+PN+AKEMHVGH+RSTIIGD   R L +LGH+V+R NHVGDWGTQFGM
Sbjct: 109  SVASQTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLSFLGHNVIRANHVGDWGTQFGM 168

Query: 1287 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKA 1346
            LIA+L +K  D       ++ L++FY+ +K+ +DED  F +RA   VV LQ  D   ++ 
Sbjct: 169  LIAYL-EKVQDGGEAEMQLSSLESFYRAAKQHYDEDPAFAERARGYVVKLQGGDEYCRQM 227

Query: 1347 WEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIM 1403
            W  + DV+    QK Y+RLNVTLT     GES Y   +  +V  L+ KGL    +G  ++
Sbjct: 228  WRKLVDVTMAQNQKTYNRLNVTLTRADVMGESLYNDMLPGIVADLKAKGLAVESEGATVV 287

Query: 1404 W--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 1455
            +        GE  G I   I K DG + Y T+D+A  + R E  KAD I+Y  D R +  
Sbjct: 288  FLDEFKNKEGEPMGVI---IQKKDGAYLYTTTDIACAKYRYETLKADRIIYYIDSRQHQH 344

Query: 1456 VL 1457
            ++
Sbjct: 345  LM 346


>gi|260598357|ref|YP_003210928.1| arginyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260217534|emb|CBA31733.1| Arginyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 577

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 224/570 (39%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNVEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQKENAGEM-ALSDLEGFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D   +  W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDDYCRDMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLSELLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 375  GKDGKPFKTRAGGTIKLSELLDEALDRARRLVAEKN--PDMPADELEKLANAVGIGAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AG++  +L     + PV 
Sbjct: 433  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGVSESEL-----TAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            ++ ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + +  
Sbjct: 488  IQDDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAETD-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA  TAK +K   D L I T
Sbjct: 546  --ALRQSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 189/334 (56%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDPAFLAKNVEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQKENAGEM-ALSDLEGFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D   +  W  + D++    Q  Y RLNVTLT     G
Sbjct: 199 KHYDEDEAFAERARSYVVKLQGGDDYCRDMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 349



 Score =  222 bits (565), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 188/333 (56%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNVEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQKENAGEM-ALSDLEGFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D   +  W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDDYCRDMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 348


>gi|268598798|ref|ZP_06132965.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268582929|gb|EEZ47605.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 572

 Score =  379 bits (972), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/567 (41%), Positives = 317/567 (55%), Gaps = 51/567 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 627
            N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83   NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 628  IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 687
            IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137  IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 745
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195  AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 746  -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 799
             GES Y   ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 255  AGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLA +R R+   KAD ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G
Sbjct: 315  TDLACLRYRVGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENAKAEFIGFGTMMG 373

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            +D K FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYA
Sbjct: 374  KDGKPFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYA 431

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L
Sbjct: 432  DLSKNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVL 484

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
                E  LA  LL+  +VL  V      H+L  YLY  +T FS FY+ C  ++  AEG  
Sbjct: 485  TEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEACPILK--AEGAS 542

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +     RL LA+ T   +K+  D+L I
Sbjct: 543  R---NSRLQLAKLTGNTLKQGLDLLGI 566



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/422 (36%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 237
           N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83  NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 238 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 297
           IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137 IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 355
           +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195 AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 356 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 409
            GES Y   ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 255 AGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 410 SDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM-- 467
           +DLA +R R+   KAD ++YV DHR      Q      K   +  ++ ++  G    M  
Sbjct: 315 TDLACLRYRVGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGK 374

Query: 468 -NVPVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQ 518
              P + R      L D+ T AV+ A        PELG D+ A +  T      K+ D  
Sbjct: 375 DGKPFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLS 434

Query: 519 CN 520
            N
Sbjct: 435 KN 436



 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/325 (41%), Positives = 183/325 (56%), Gaps = 36/325 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 1254
            N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83   NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 1255 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 1314
            IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137  IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 1372
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195  AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 1373 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 1426
             GES Y   ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 255  AGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 1427 SDLAAIRQRIEEEKADWIVYVTDHR 1451
            +DLA +R R+   KAD ++YV DHR
Sbjct: 315  TDLACLRYRVGRLKADRLLYVVDHR 339


>gi|147673730|ref|YP_001217600.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227118521|ref|YP_002820417.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|146315613|gb|ABQ20152.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227013971|gb|ACP10181.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 599

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKNIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 402

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 403  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 460

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 461  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 515

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 516  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 571

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 572  SRLKLAALTAKTIKQGLALLGIDT 595



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104 FINIFLSEEFLAAQAEAALADARLGVAQEAPKNIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 344 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 403

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 404 KTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 457



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKNIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|417821417|ref|ZP_12468031.1| arginyl-tRNA synthetase [Vibrio cholerae HE39]
 gi|419830538|ref|ZP_14354023.1| arginine--tRNA ligase [Vibrio cholerae HC-1A2]
 gi|419834219|ref|ZP_14357674.1| arginine--tRNA ligase [Vibrio cholerae HC-61A2]
 gi|422910924|ref|ZP_16945552.1| arginyl-tRNA synthetase [Vibrio cholerae HE-09]
 gi|422917923|ref|ZP_16952241.1| arginyl-tRNA synthetase [Vibrio cholerae HC-02A1]
 gi|423822825|ref|ZP_17716835.1| arginine--tRNA ligase [Vibrio cholerae HC-55C2]
 gi|423856790|ref|ZP_17720642.1| arginine--tRNA ligase [Vibrio cholerae HC-59A1]
 gi|423883093|ref|ZP_17724230.1| arginine--tRNA ligase [Vibrio cholerae HC-60A1]
 gi|423956582|ref|ZP_17735136.1| arginine--tRNA ligase [Vibrio cholerae HE-40]
 gi|423985370|ref|ZP_17738687.1| arginine--tRNA ligase [Vibrio cholerae HE-46]
 gi|423998351|ref|ZP_17741603.1| arginine--tRNA ligase [Vibrio cholerae HC-02C1]
 gi|424017244|ref|ZP_17757073.1| arginine--tRNA ligase [Vibrio cholerae HC-55B2]
 gi|424020169|ref|ZP_17759955.1| arginine--tRNA ligase [Vibrio cholerae HC-59B1]
 gi|424591790|ref|ZP_18031215.1| arginyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
 gi|424625544|ref|ZP_18064005.1| arginyl-tRNA synthetase [Vibrio cholerae HC-50A1]
 gi|424630026|ref|ZP_18068313.1| arginyl-tRNA synthetase [Vibrio cholerae HC-51A1]
 gi|424634074|ref|ZP_18072174.1| arginyl-tRNA synthetase [Vibrio cholerae HC-52A1]
 gi|424637151|ref|ZP_18075159.1| arginyl-tRNA synthetase [Vibrio cholerae HC-55A1]
 gi|424641061|ref|ZP_18078944.1| arginyl-tRNA synthetase [Vibrio cholerae HC-56A1]
 gi|424649128|ref|ZP_18086791.1| arginyl-tRNA synthetase [Vibrio cholerae HC-57A1]
 gi|443528045|ref|ZP_21094093.1| arginyl-tRNA synthetase [Vibrio cholerae HC-78A1]
 gi|340039048|gb|EGR00023.1| arginyl-tRNA synthetase [Vibrio cholerae HE39]
 gi|341632798|gb|EGS57655.1| arginyl-tRNA synthetase [Vibrio cholerae HE-09]
 gi|341636805|gb|EGS61499.1| arginyl-tRNA synthetase [Vibrio cholerae HC-02A1]
 gi|408011899|gb|EKG49698.1| arginyl-tRNA synthetase [Vibrio cholerae HC-50A1]
 gi|408017993|gb|EKG55465.1| arginyl-tRNA synthetase [Vibrio cholerae HC-52A1]
 gi|408023207|gb|EKG60386.1| arginyl-tRNA synthetase [Vibrio cholerae HC-56A1]
 gi|408023700|gb|EKG60859.1| arginyl-tRNA synthetase [Vibrio cholerae HC-55A1]
 gi|408030599|gb|EKG67253.1| arginyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
 gi|408032401|gb|EKG68986.1| arginyl-tRNA synthetase [Vibrio cholerae HC-57A1]
 gi|408054814|gb|EKG89773.1| arginyl-tRNA synthetase [Vibrio cholerae HC-51A1]
 gi|408620311|gb|EKK93323.1| arginine--tRNA ligase [Vibrio cholerae HC-1A2]
 gi|408634801|gb|EKL07036.1| arginine--tRNA ligase [Vibrio cholerae HC-55C2]
 gi|408640582|gb|EKL12371.1| arginine--tRNA ligase [Vibrio cholerae HC-59A1]
 gi|408641217|gb|EKL12998.1| arginine--tRNA ligase [Vibrio cholerae HC-60A1]
 gi|408649041|gb|EKL20358.1| arginine--tRNA ligase [Vibrio cholerae HC-61A2]
 gi|408657497|gb|EKL28577.1| arginine--tRNA ligase [Vibrio cholerae HE-40]
 gi|408663974|gb|EKL34819.1| arginine--tRNA ligase [Vibrio cholerae HE-46]
 gi|408852706|gb|EKL92528.1| arginine--tRNA ligase [Vibrio cholerae HC-02C1]
 gi|408860035|gb|EKL99689.1| arginine--tRNA ligase [Vibrio cholerae HC-55B2]
 gi|408867263|gb|EKM06625.1| arginine--tRNA ligase [Vibrio cholerae HC-59B1]
 gi|443453561|gb|ELT17380.1| arginyl-tRNA synthetase [Vibrio cholerae HC-78A1]
          Length = 577

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLALLGIDT 573



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|156933540|ref|YP_001437456.1| arginyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|389840575|ref|YP_006342659.1| arginyl-tRNA synthetase [Cronobacter sakazakii ES15]
 gi|417791665|ref|ZP_12439102.1| arginyl-tRNA synthetase [Cronobacter sakazakii E899]
 gi|424800034|ref|ZP_18225576.1| Arginyl-tRNA synthetase [Cronobacter sakazakii 696]
 gi|429115993|ref|ZP_19176911.1| Arginyl-tRNA synthetase [Cronobacter sakazakii 701]
 gi|429122096|ref|ZP_19182697.1| Arginyl-tRNA synthetase [Cronobacter sakazakii 680]
 gi|449307863|ref|YP_007440219.1| arginyl-tRNA ligase [Cronobacter sakazakii SP291]
 gi|166232785|sp|A7MEC0.1|SYR_CROS8 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|156531794|gb|ABU76620.1| hypothetical protein ESA_01360 [Cronobacter sakazakii ATCC BAA-894]
 gi|333954249|gb|EGL72114.1| arginyl-tRNA synthetase [Cronobacter sakazakii E899]
 gi|387851051|gb|AFJ99148.1| arginyl-tRNA synthetase [Cronobacter sakazakii ES15]
 gi|423235755|emb|CCK07446.1| Arginyl-tRNA synthetase [Cronobacter sakazakii 696]
 gi|426319122|emb|CCK03024.1| Arginyl-tRNA synthetase [Cronobacter sakazakii 701]
 gi|426323421|emb|CCK13434.1| Arginyl-tRNA synthetase [Cronobacter sakazakii 680]
 gi|449097896|gb|AGE85930.1| arginyl-tRNA ligase [Cronobacter sakazakii SP291]
          Length = 577

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 322/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDEYCREMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PESVPLEHHMFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLSELLDE L R+   +  KN   ++   EL +   AV  G +KY
Sbjct: 375  GKDGKPFKTRAGGTIKLSELLDEALDRARRLVAGKN--PDMPADELEKLANAVGIGAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AG+   +L     + PV 
Sbjct: 433  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGVKESEL-----TAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            ++ ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + +  
Sbjct: 488  IQDDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILTAETD-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA  TAK +K   D L I T
Sbjct: 546  --ALRQSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 190/334 (56%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y RLNVTLT     G
Sbjct: 199 KHYDEDEAFAERARSYVVKLQGGDEYCREMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQA 349



 Score =  223 bits (569), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 189/333 (56%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + I+  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNIEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEM-ALSDLEGFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDEYCREMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 348


>gi|15642074|ref|NP_231706.1| arginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
            N16961]
 gi|121586898|ref|ZP_01676678.1| arginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121727379|ref|ZP_01680518.1| arginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|153818393|ref|ZP_01971060.1| arginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153821699|ref|ZP_01974366.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227082200|ref|YP_002810751.1| arginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507837|ref|ZP_04397342.1| arginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511927|ref|ZP_04401406.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519063|ref|ZP_04408506.1| arginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229607382|ref|YP_002878030.1| arginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254849161|ref|ZP_05238511.1| arginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298497899|ref|ZP_07007706.1| arginyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9656621|gb|AAF95220.1| arginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
            N16961]
 gi|121548834|gb|EAX58877.1| arginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121630271|gb|EAX62669.1| arginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126511083|gb|EAZ73677.1| arginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126520797|gb|EAZ78020.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227010088|gb|ACP06300.1| arginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229343752|gb|EEO08727.1| arginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351892|gb|EEO16833.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355342|gb|EEO20263.1| arginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370037|gb|ACQ60460.1| arginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254844866|gb|EET23280.1| arginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297542232|gb|EFH78282.1| arginyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 599

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 402

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 403  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 460

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 461  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 515

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 516  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 571

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 572  SRLKLAALTAKTIKQGLALLGIDT 595



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104 FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 344 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 403

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 404 KTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 457



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|343514137|ref|ZP_08751219.1| arginyl-tRNA synthetase [Vibrio sp. N418]
 gi|342800803|gb|EGU36314.1| arginyl-tRNA synthetase [Vibrio sp. N418]
          Length = 577

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/565 (38%), Positives = 324/565 (57%), Gaps = 35/565 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +     T  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALNDARLGVTAEEAKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAAKARAYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESK 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL    +G ++++      +D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLQAQGLAVESEGAQVVFLDEYKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEQLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN    LT  E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAAQLIESKN--PTLTAEEKATIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVSMDELQ-----GDIVITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNC-YCIEKDAEGKIKTVH 1043
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C   + +DA      V 
Sbjct: 494  KALVAKLLQFEEAVQSVAREGQPHIMCAYLFELAGQFSSFYEACPILVAEDA-----AVK 548

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL +A  TAK +K+   +L I T
Sbjct: 549  QSRLKMAALTAKTIKQGLSLLGIDT 573



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 194/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +     T  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALNDARLGVTAEEAKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAAKARAYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESK 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL    +G ++++      +D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLQAQGLAVESEGAQVVFLDEYKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E+  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEQLGADRVLYFIDSRQHQHLMQA 349



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 193/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +     T  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALNDARLGVTAEEAKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAAKARAYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESK 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL    +G ++++      +D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLQAQGLAVESEGAQVVFLDEYKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E+  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEQLGADRVLYFIDSRQHQHLMQ 348


>gi|255745182|ref|ZP_05419131.1| arginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262155960|ref|ZP_06029081.1| arginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|360035956|ref|YP_004937719.1| arginyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
 gi|440710271|ref|ZP_20890922.1| arginyl-tRNA synthetase [Vibrio cholerae 4260B]
 gi|449055503|ref|ZP_21734171.1| Arginyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
 gi|255737012|gb|EET92408.1| arginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030271|gb|EEY48914.1| arginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|356647110|gb|AET27165.1| arginyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
 gi|439974494|gb|ELP50671.1| arginyl-tRNA synthetase [Vibrio cholerae 4260B]
 gi|448264542|gb|EMB01779.1| Arginyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
          Length = 592

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 96

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 395

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 396  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 453

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 454  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 508

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 509  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 564

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 565  SRLKLAALTAKTIKQGLALLGIDT 588



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 96

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 337 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 396

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 397 KTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 450



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 96

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQ 363


>gi|421566921|ref|ZP_16012662.1| arginine--tRNA ligase [Neisseria meningitidis NM3001]
 gi|402344864|gb|EJU79997.1| arginine--tRNA ligase [Neisseria meningitidis NM3001]
          Length = 572

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/563 (41%), Positives = 319/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  +VL  V      H+L  YLY I+T FS FY+ C  ++ ++  +     
Sbjct: 489  EKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILKAESASR----- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  227 bits (578), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  220 bits (561), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|429100020|ref|ZP_19161994.1| Arginyl-tRNA synthetase [Cronobacter turicensis 564]
 gi|426286669|emb|CCJ88107.1| Arginyl-tRNA synthetase [Cronobacter turicensis 564]
          Length = 577

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 224/570 (39%), Positives = 323/570 (56%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FL   +  + ++  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNVEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQKENAGEM-ALSDLEGFYREAK 198

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            K +DEDE F +RA   VV LQ  D   +  W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDDYCRDMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTR+G T+KLSELLDE L R+   + +KN   ++   EL +   AV  G +KY
Sbjct: 375  GKDGKPFKTRAGGTIKLSELLDEALDRARRLVAEKN--PDMPADELEKLANAVGIGAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AG++  +L     + PV 
Sbjct: 433  ADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGVSESEL-----TAPVV 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            ++ ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  + +  
Sbjct: 488  IQDDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSAETD-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +   RL LA  TAK +K   D L I T
Sbjct: 546  --ALRQSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/336 (38%), Positives = 190/336 (56%), Gaps = 33/336 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FL   +  + ++  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82  FINIFLDPAFLAKNVEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140 GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQKENAGEM-ALSDLEGFYREAK 198

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           K +DEDE F +RA   VV LQ  D   +  W  + D++    Q  Y RLNVTLT     G
Sbjct: 199 KHYDEDEAFAERARSYVVKLQGGDDYCRDMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259 ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           T+D+A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 351



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 188/333 (56%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K     G     F   Q++A +          L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMAIAKKL---GMPPRQF-AEQALAHL---------DLTGIAAKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FL   +  + ++  + +   GV+   ++    ++VD+S+PN+AKEMHVGH+RSTII
Sbjct: 82   FINIFLDPAFLAKNVEAAVASDRAGVE--KVSAPQTIVVDYSAPNVAKEMHVGHVRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD   R LE+LGH V+R NHVGDWGTQFGMLIA+L+ +  +   +   ++DL+ FY+E+K
Sbjct: 140  GDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQKENAGEM-ALSDLEGFYREAK 198

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            K +DEDE F +RA   VV LQ  D   +  W  + D++    Q  Y RLNVTLT     G
Sbjct: 199  KHYDEDEAFAERARSYVVKLQGGDDYCRDMWRKLVDITMTQNQITYQRLNVTLTRDDVMG 258

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y 
Sbjct: 259  ESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 348


>gi|416169449|ref|ZP_11608190.1| arginyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325130593|gb|EGC53340.1| arginyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 572

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 238/563 (42%), Positives = 319/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ IA      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKIADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 217/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ IA      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKIADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ IA      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKIADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|254670676|emb|CBA06775.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 572

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 319/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/418 (37%), Positives = 217/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  218 bits (554), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|392422771|ref|YP_006459375.1| arginyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
 gi|390984959|gb|AFM34952.1| arginyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
          Length = 579

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 238/601 (39%), Positives = 338/601 (56%), Gaps = 57/601 (9%)

Query: 481  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTAEGVLPEGLTPAIQVENTRDK---SHGDFASNIAMMLAKPAGL 57

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            K     P D+A+ +       +A  P  A+ I K+E+A PGF+N F +     E+++  +
Sbjct: 58   K-----PRDLAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAERLEAAL 104

Query: 592  VNGVQPPTL-----NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
             +    P L     +   RV++D SSPN+AKEMHVGHLRSTIIGD + R+LEYLG +V+R
Sbjct: 105  AD----PQLAVRKASAPQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEYLGDEVIR 160

Query: 647  LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 706
             NHVGDWGTQFGML+A+L++K P        ++DL+ FY+ +K+RFDE   F  RA + V
Sbjct: 161  QNHVGDWGTQFGMLLAYLEEK-P--AAAESELSDLEQFYRAAKQRFDESAGFADRARELV 217

Query: 707  VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEK 763
            V LQ  D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L  
Sbjct: 218  VKLQAGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNAELADIVEALRS 277

Query: 764  KGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 818
            KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD  +
Sbjct: 278  KGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADRAL 337

Query: 819  YVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSEL 878
            Y  D  Q +HF++  E A++AG ++    +++ +GFG + G D + FKTR G TVKL +L
Sbjct: 338  YFVDQRQALHFQMAFEVARRAGFVHAG-MQLEHMGFGTMNGADGRPFKTRDGGTVKLIDL 396

Query: 879  LDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD 938
            LDE  +R+   +K KN   +L  +EL +  +AV    +KYADLS +R  DY F+F+ ML 
Sbjct: 397  LDEAEQRAYALVKGKN--PDLDESELRQIARAVGISAVKYADLSKHRTSDYRFNFELMLS 454

Query: 939  DRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVL 998
              GNTA YLLYAYTR+AS+ R  G   ++  +A Q   + LE E+E ALA  L +  +VL
Sbjct: 455  FEGNTAPYLLYAYTRVASVFRKLGQGIDE--IAGQ---IQLEAEQELALAAKLAQFGEVL 509

Query: 999  MLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMK 1058
              V      H LC YLYD++  FS FY++C  +  +   + ++    RL LA  T K +K
Sbjct: 510  NSVGEKGEPHLLCAYLYDLAGLFSSFYEHCPILSAEQPEQKQS----RLRLAALTGKTLK 565

Query: 1059 K 1059
            +
Sbjct: 566  Q 566



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/366 (39%), Positives = 199/366 (54%), Gaps = 45/366 (12%)

Query: 91  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1   MKDSIRHLIQQALVRLTAEGVLPEGLTPAIQVENTRDK---SHGDFASNIAMMLAKPAGL 57

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
           K     P D+A+ +       +A  P  A+ I K+E+A PGF+N F +     E+++  +
Sbjct: 58  K-----PRDLAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAERLEAAL 104

Query: 202 VNGVQPPTL-----NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
            +    P L     +   RV++D SSPN+AKEMHVGHLRSTIIGD + R+LEYLG +V+R
Sbjct: 105 AD----PQLAVRKASAPQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEYLGDEVIR 160

Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 316
            NHVGDWGTQFGML+A+L++K P        ++DL+ FY+ +K+RFDE   F  RA + V
Sbjct: 161 QNHVGDWGTQFGMLLAYLEEK-P--AAAESELSDLEQFYRAAKQRFDESAGFADRARELV 217

Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEK 373
           V LQ  D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L  
Sbjct: 218 VKLQAGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNAELADIVEALRS 277

Query: 374 KGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 428
           KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD  +
Sbjct: 278 KGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADRAL 337

Query: 429 YVTDHR 434
           Y  D R
Sbjct: 338 YFVDQR 343



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/366 (39%), Positives = 199/366 (54%), Gaps = 45/366 (12%)

Query: 1108 LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTAEGVLPEGLTPAIQVENTRDK---SHGDFASNIAMMLAKPAGL 57

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            K     P D+A+ +       +A  P  A+ I K+E+A PGF+N F +     E+++  +
Sbjct: 58   K-----PRDLAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAERLEAAL 104

Query: 1219 VNGVQPPTL-----NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
             +    P L     +   RV++D SSPN+AKEMHVGHLRSTIIGD + R+LEYLG +V+R
Sbjct: 105  AD----PQLAVRKASAPQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEYLGDEVIR 160

Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
             NHVGDWGTQFGML+A+L++K P        ++DL+ FY+ +K+RFDE   F  RA + V
Sbjct: 161  QNHVGDWGTQFGMLLAYLEEK-P--AAAESELSDLEQFYRAAKQRFDESAGFADRARELV 217

Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEK 1390
            V LQ  D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L  
Sbjct: 218  VKLQAGDAQCLSLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNAELADIVEALRS 277

Query: 1391 KGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIV 1445
            KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD  +
Sbjct: 278  KGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADRAL 337

Query: 1446 YVTDHR 1451
            Y  D R
Sbjct: 338  YFVDQR 343


>gi|421354739|ref|ZP_15805071.1| arginyl-tRNA synthetase [Vibrio cholerae HE-45]
 gi|395953864|gb|EJH64477.1| arginyl-tRNA synthetase [Vibrio cholerae HE-45]
          Length = 577

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAKALIESKN--PELSAEEKTNIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLALLGIDT 573



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|374334503|ref|YP_005091190.1| arginyl-tRNA synthetase [Oceanimonas sp. GK1]
 gi|372984190|gb|AEY00440.1| arginyl-tRNA synthetase [Oceanimonas sp. GK1]
          Length = 584

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/549 (40%), Positives = 319/549 (58%), Gaps = 33/549 (6%)

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            K   +NP  +AQ         L  N   ++++ K E+A PGF+N FL   +   QI  ++
Sbjct: 53   KPAGQNPRALAQL--------LVDNLPASELVAKTELAGPGFINFFLDSAWLARQIDAMV 104

Query: 592  VNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
             +     P + +   V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+
Sbjct: 105  ADARANVPVVEQPQTVVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHI 164

Query: 651  GDWGTQFGMLIAH---LQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
            GDWGTQFGMLIA+   L+ + PD L+    ++DL+ FY+ESK+++D D  F +RA   VV
Sbjct: 165  GDWGTQFGMLIAYLEKLEQENPDVLSSG--LSDLEQFYRESKQQYDADPDFAERARNYVV 222

Query: 708  ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKK 764
             LQ  D      W+ + DV+ +  Q++YDRL V+LT     GES Y   +  +V  L+++
Sbjct: 223  KLQGGDAYCLNMWQKLVDVTLKHNQEVYDRLGVSLTPNDVMGESMYNPMLADIVADLQQQ 282

Query: 765  GLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
            GL   D+G  +++    +++   PM ++  K DGGF Y T+D+A  + R ++  AD  +Y
Sbjct: 283  GLAVEDEGALVVYLDEYQNKDGDPMGVIVRKKDGGFLYTTTDIACAKYRYQQLGADRALY 342

Query: 820  VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
              D  Q  H        +KAG + P    ++   FG++LG+D + FKTRSG T+KL +LL
Sbjct: 343  FIDSRQHQHLMQAWTIVRKAGYV-PESMSLEHHAFGMMLGKDGRPFKTRSGGTIKLVDLL 401

Query: 880  DEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDD 939
            DE   R+   L+ K   T+L+  E ++    VA   +KYADLS +R  DY+F +D ML  
Sbjct: 402  DEAEERAAALLEQK--QTDLSAEEKAQVVNRVAMAAVKYADLSKSRTTDYIFDWDNMLSF 459

Query: 940  RGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLM 999
             GNTA YL YAYTR+ SI R AG+N+E L  +     V +E   E ALA+ L++ ND + 
Sbjct: 460  EGNTAPYLQYAYTRVQSIFRKAGVNAEALEGS-----VMIEAPAEEALAQKLVQFNDTVK 514

Query: 1000 LVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
             V      H LC YLY++S AF  FY+ C  I KD  G        RL L  ATAKV+++
Sbjct: 515  SVADKGMPHLLCLYLYELSGAFMSFYEAC-PINKD--GVPAEARASRLRLCAATAKVLQQ 571

Query: 1060 CFDILNIRT 1068
               +L I T
Sbjct: 572  GLSLLGIDT 580



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/313 (39%), Positives = 188/313 (60%), Gaps = 22/313 (7%)

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
           K   +NP  +AQ         L  N   ++++ K E+A PGF+N FL   +   QI  ++
Sbjct: 53  KPAGQNPRALAQL--------LVDNLPASELVAKTELAGPGFINFFLDSAWLARQIDAMV 104

Query: 202 VNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
            +     P + +   V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+
Sbjct: 105 ADARANVPVVEQPQTVVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHI 164

Query: 261 GDWGTQFGMLIAH---LQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 317
           GDWGTQFGMLIA+   L+ + PD L+    ++DL+ FY+ESK+++D D  F +RA   VV
Sbjct: 165 GDWGTQFGMLIAYLEKLEQENPDVLSSG--LSDLEQFYRESKQQYDADPDFAERARNYVV 222

Query: 318 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKK 374
            LQ  D      W+ + DV+ +  Q++YDRL V+LT     GES Y   +  +V  L+++
Sbjct: 223 KLQGGDAYCLNMWQKLVDVTLKHNQEVYDRLGVSLTPNDVMGESMYNPMLADIVADLQQQ 282

Query: 375 GLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVY 429
           GL   D+G  +++    +++   PM ++  K DGGF Y T+D+A  + R ++  AD  +Y
Sbjct: 283 GLAVEDEGALVVYLDEYQNKDGDPMGVIVRKKDGGFLYTTTDIACAKYRYQQLGADRALY 342

Query: 430 VTDHRSYHQVLQA 442
             D R +  ++QA
Sbjct: 343 FIDSRQHQHLMQA 355



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 187/312 (59%), Gaps = 22/312 (7%)

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            K   +NP  +AQ         L  N   ++++ K E+A PGF+N FL   +   QI  ++
Sbjct: 53   KPAGQNPRALAQL--------LVDNLPASELVAKTELAGPGFINFFLDSAWLARQIDAMV 104

Query: 1219 VNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
             +     P + +   V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+LGH V+R NH+
Sbjct: 105  ADARANVPVVEQPQTVVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHI 164

Query: 1278 GDWGTQFGMLIAH---LQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
            GDWGTQFGMLIA+   L+ + PD L+    ++DL+ FY+ESK+++D D  F +RA   VV
Sbjct: 165  GDWGTQFGMLIAYLEKLEQENPDVLSSG--LSDLEQFYRESKQQYDADPDFAERARNYVV 222

Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKK 1391
             LQ  D      W+ + DV+ +  Q++YDRL V+LT     GES Y   +  +V  L+++
Sbjct: 223  KLQGGDAYCLNMWQKLVDVTLKHNQEVYDRLGVSLTPNDVMGESMYNPMLADIVADLQQQ 282

Query: 1392 GLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVY 1446
            GL   D+G  +++    +++   PM ++  K DGGF Y T+D+A  + R ++  AD  +Y
Sbjct: 283  GLAVEDEGALVVYLDEYQNKDGDPMGVIVRKKDGGFLYTTTDIACAKYRYQQLGADRALY 342

Query: 1447 VTDHRSYHQVLQ 1458
              D R +  ++Q
Sbjct: 343  FIDSRQHQHLMQ 354


>gi|422923382|ref|ZP_16956536.1| arginyl-tRNA synthetase [Vibrio cholerae BJG-01]
 gi|341644121|gb|EGS68362.1| arginyl-tRNA synthetase [Vibrio cholerae BJG-01]
          Length = 577

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLALLGIDT 573



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|145343622|ref|XP_001416415.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
 gi|144576640|gb|ABO94708.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
          Length = 600

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 224/581 (38%), Positives = 319/581 (54%), Gaps = 58/581 (9%)

Query: 488  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK--KNPFDIAQSI 545
            +V+  FP+  DK   VA          GDFQ + AM +       GE   ++P D+A  I
Sbjct: 70   SVRERFPDY-DKPIDVAECANT---SLGDFQSSSAMQIFSALAKAGETSFRSPRDVADEI 125

Query: 546  ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR 605
             + ++          ++ D I +A PGF+N  LS  Y   ++     +    PT+  K  
Sbjct: 126  VAGISER--------EMFDSITIAGPGFINFRLSDNYIRSELFRETKSAELGPTI--KRH 175

Query: 606  VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 665
            VLVDFSSPNIAKEMHVGHLRSTIIGDT+  + E+ G+   R+NHVGDWGTQFGMLI  ++
Sbjct: 176  VLVDFSSPNIAKEMHVGHLRSTIIGDTLCNVFEFCGYTTTRVNHVGDWGTQFGMLIQFMK 235

Query: 666  DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 725
            +   + ++    ++DLQA YK++K++FD D+ FK ++   VV LQ +DP+    W  IC 
Sbjct: 236  E---NGISPDSSVSDLQACYKQAKQKFDVDDDFKAKSKDMVVKLQSYDPETAHMWRQICS 292

Query: 726  VSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIP 785
             SR +FQ IYDRL + + E+GESFY   +  ++  L+ K L+  D G   ++ E   + P
Sbjct: 293  ASRAEFQTIYDRLKIRIVEKGESFYNDMIPSVLDELQSKRLIVEDAGALCIFTESDDT-P 351

Query: 786  MTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPN 845
            +   KSDGGF Y ++DLAA+R RI  EKAD I+YVTD GQ  HF+ + + A +AG     
Sbjct: 352  VICRKSDGGFNYASTDLAAVRHRIMSEKADKIIYVTDQGQHKHFKAIFKTANEAG-WGDA 410

Query: 846  KTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELS 905
            +  ++ VGFGVV                     LDE   R    L++K   T LT  E+ 
Sbjct: 411  QVALEHVGFGVV---------------------LDEAEERCFKFLEEKG--TNLTTDEIK 447

Query: 906  EAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINS 965
             A + +    +KYADL +NR  +Y FSFD+MLD +GNTA+YL Y++ R+A+I + +    
Sbjct: 448  HASKVLGVSSVKYADLQNNRLTNYTFSFDRMLDLKGNTAMYLQYSHARVATILQKSSF-- 505

Query: 966  EDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFY 1025
                 A +    S+ HE+E  LA  +++  D L+   +DL    LCEYLY + + F+ FY
Sbjct: 506  -----AGRPDQFSISHEEERLLAIQIIKFQDALLTTLQDLAPSKLCEYLYTLCSTFNNFY 560

Query: 1026 DNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
              C  I  D E         R+ L E T   MK  F +L I
Sbjct: 561  AECKVIGGDNE-------ESRIYLCERTLYTMKLTFSLLGI 594



 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/356 (41%), Positives = 209/356 (58%), Gaps = 21/356 (5%)

Query: 98  AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK--KNPFDIAQSI 155
           +V+  FP+  DK   VA          GDFQ + AM +       GE   ++P D+A  I
Sbjct: 70  SVRERFPDY-DKPIDVAECANT---SLGDFQSSSAMQIFSALAKAGETSFRSPRDVADEI 125

Query: 156 ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR 215
            + ++          ++ D I +A PGF+N  LS  Y   ++     +    PT+  K  
Sbjct: 126 VAGISER--------EMFDSITIAGPGFINFRLSDNYIRSELFRETKSAELGPTI--KRH 175

Query: 216 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 275
           VLVDFSSPNIAKEMHVGHLRSTIIGDT+  + E+ G+   R+NHVGDWGTQFGMLI  ++
Sbjct: 176 VLVDFSSPNIAKEMHVGHLRSTIIGDTLCNVFEFCGYTTTRVNHVGDWGTQFGMLIQFMK 235

Query: 276 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 335
           +   + ++    ++DLQA YK++K++FD D+ FK ++   VV LQ +DP+    W  IC 
Sbjct: 236 E---NGISPDSSVSDLQACYKQAKQKFDVDDDFKAKSKDMVVKLQSYDPETAHMWRQICS 292

Query: 336 VSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIP 395
            SR +FQ IYDRL + + E+GESFY   +  ++  L+ K L+  D G   ++ E   + P
Sbjct: 293 ASRAEFQTIYDRLKIRIVEKGESFYNDMIPSVLDELQSKRLIVEDAGALCIFTESDDT-P 351

Query: 396 MTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQG 451
           +   KSDGGF Y ++DLAA+R RI  EKAD I+YVTD +  H+  +AI +   + G
Sbjct: 352 VICRKSDGGFNYASTDLAAVRHRIMSEKADKIIYVTD-QGQHKHFKAIFKTANEAG 406



 Score =  256 bits (655), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 143/349 (40%), Positives = 205/349 (58%), Gaps = 23/349 (6%)

Query: 1115 AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK--KNPFDIAQSI 1172
            +V+  FP+  DK   VA          GDFQ + AM +       GE   ++P D+A  I
Sbjct: 70   SVRERFPDY-DKPIDVAECANT---SLGDFQSSSAMQIFSALAKAGETSFRSPRDVADEI 125

Query: 1173 ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR 1232
             + ++          ++ D I +A PGF+N  LS  Y   ++     +    PT+  K  
Sbjct: 126  VAGISER--------EMFDSITIAGPGFINFRLSDNYIRSELFRETKSAELGPTI--KRH 175

Query: 1233 VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ 1292
            VLVDFSSPNIAKEMHVGHLRSTIIGDT+  + E+ G+   R+NHVGDWGTQFGMLI  ++
Sbjct: 176  VLVDFSSPNIAKEMHVGHLRSTIIGDTLCNVFEFCGYTTTRVNHVGDWGTQFGMLIQFMK 235

Query: 1293 DKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICD 1352
            +   + ++    ++DLQA YK++K++FD D+ FK ++   VV LQ +DP+    W  IC 
Sbjct: 236  E---NGISPDSSVSDLQACYKQAKQKFDVDDDFKAKSKDMVVKLQSYDPETAHMWRQICS 292

Query: 1353 VSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIP 1412
             SR +FQ IYDRL + + E+GESFY   +  ++  L+ K L+  D G   ++ E   + P
Sbjct: 293  ASRAEFQTIYDRLKIRIVEKGESFYNDMIPSVLDELQSKRLIVEDAGALCIFTESDDT-P 351

Query: 1413 MTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
            +   KSDGGF Y ++DLAA+R RI  EKAD I+YVTD   H+ +  + +
Sbjct: 352  VICRKSDGGFNYASTDLAAVRHRIMSEKADKIIYVTDQGQHKHFKAIFK 400


>gi|262191347|ref|ZP_06049538.1| arginyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262032766|gb|EEY51313.1| arginyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 592

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 96

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 395

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 396  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 453

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 454  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 508

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 509  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 564

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 565  SRLKLAALTAKTIKQGLALLGIDT 588



 Score =  239 bits (610), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 96

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 337 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 396

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 397 KTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 450



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 96

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQ 363


>gi|421540754|ref|ZP_15986894.1| arginine--tRNA ligase [Neisseria meningitidis 93004]
 gi|402317834|gb|EJU53362.1| arginine--tRNA ligase [Neisseria meningitidis 93004]
          Length = 572

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/563 (41%), Positives = 319/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  +VL  V      H+L  YLY I+T FS FY+ C  ++ ++  +     
Sbjct: 489  EKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILKAESASR----- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  226 bits (577), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 187/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+LE++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|229522032|ref|ZP_04411449.1| arginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|254226080|ref|ZP_04919678.1| arginyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621392|gb|EAZ49728.1| arginyl-tRNA synthetase [Vibrio cholerae V51]
 gi|229340957|gb|EEO05962.1| arginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 599

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 402

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 403  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 460

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 461  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 515

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 516  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 571

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 572  SRLKLAALTAKTIKQGLALLGIDT 595



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104 FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 344 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 403

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 404 KTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 457



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|291044019|ref|ZP_06569735.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291012482|gb|EFE04471.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 581

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 235/567 (41%), Positives = 317/567 (55%), Gaps = 51/567 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 45   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 91

Query: 575  NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 627
            N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 92   NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 145

Query: 628  IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 687
            IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 146  IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 203

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 745
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 204  AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 263

Query: 746  -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 799
             GES Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 264  AGESKYNDDLQPVVDDLVEKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 323

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLA +R RI   KA  ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G
Sbjct: 324  TDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYL-PENAKAEFIGFGTMMG 382

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            +D K FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYA
Sbjct: 383  KDGKPFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYA 440

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L
Sbjct: 441  DLSKNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVL 493

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
                E  LA  LL+  +VL  V      H+L  YLY  +T FS FY+ C  ++  AEG  
Sbjct: 494  TEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEACPILK--AEGAS 551

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +     RL LA+ T   +K+  D+L I
Sbjct: 552  R---NSRLQLAKLTGNTLKQGLDLLGI 575



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/422 (37%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 45  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 91

Query: 185 NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 237
           N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 92  NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 145

Query: 238 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 297
           IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 146 IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 203

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 355
           +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 204 AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 263

Query: 356 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 409
            GES Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 264 AGESKYNDDLQPVVDDLVEKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 323

Query: 410 SDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM-- 467
           +DLA +R RI   KA  ++YV DHR      Q      K   +  ++ ++  G    M  
Sbjct: 324 TDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGK 383

Query: 468 -NVPVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQ 518
              P + R      L D+ T AV+ A        PELG D+ A +  T      K+ D  
Sbjct: 384 DGKPFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLS 443

Query: 519 CN 520
            N
Sbjct: 444 KN 445



 Score =  219 bits (558), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/325 (41%), Positives = 183/325 (56%), Gaps = 36/325 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 45   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 91

Query: 1202 NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 1254
            N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 92   NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 145

Query: 1255 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 1314
            IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 146  IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 203

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 1372
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 204  AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 263

Query: 1373 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 1426
             GES Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 264  AGESKYNDDLQPVVDDLVEKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 323

Query: 1427 SDLAAIRQRIEEEKADWIVYVTDHR 1451
            +DLA +R RI   KA  ++YV DHR
Sbjct: 324  TDLACLRYRIGRLKAGRLLYVVDHR 348


>gi|229528909|ref|ZP_04418299.1| arginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332683|gb|EEN98169.1| arginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 591

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 49   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 95

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 96   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 155

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 156  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 215

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 216  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 275

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 276  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 335

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 336  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 394

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 395  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKAAIANTVAMAAVKYADLSKH 452

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 453  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 507

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 508  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 563

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 564  SRLKLAALTAKTIKQGLALLGIDT 587



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 49  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 95

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 96  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 155

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 156 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 215

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 216 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 275

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 276 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 335

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 336 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 395

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 396 KTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKAAIANTVAMAAVKYADL 449



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 49   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 95

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 96   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 155

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 156  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 215

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 216  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 275

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 276  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 335

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 336  AKYRYETLGADRVLYFIDSRQHQHLMQ 362


>gi|421351805|ref|ZP_15802170.1| arginyl-tRNA synthetase [Vibrio cholerae HE-25]
 gi|395952250|gb|EJH62864.1| arginyl-tRNA synthetase [Vibrio cholerae HE-25]
          Length = 577

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 226/570 (39%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FLS  +   Q +    D+ +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 82   FINIFLSEEFLAAQAEAALADVRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 136  TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 195

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
            ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 196  ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 255

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 256  VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D + FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KY
Sbjct: 375  GKDGRPFKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + 
Sbjct: 433  ADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQ 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  EKE AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E  
Sbjct: 488  ITEEKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              ++   RL LA  TAK +K+   +L I T
Sbjct: 546  --SIKQSRLKLAALTAKTIKQGLALLGIDT 573



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/334 (41%), Positives = 195/334 (58%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FLS  +   Q +    D+ +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 82  FINIFLSEEFLAAQAEAALADVRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 136 TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 195

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
           ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 196 ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 255

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 256 VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  237 bits (605), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/333 (41%), Positives = 194/333 (58%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FLS  +   Q +    D+ +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 82   FINIFLSEEFLAAQAEAALADVRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 136  TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 195

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
            ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 196  ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 255

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 256  VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|333898619|ref|YP_004472492.1| arginyl-tRNA synthetase [Pseudomonas fulva 12-X]
 gi|333113884|gb|AEF20398.1| Arginyl-tRNA synthetase [Pseudomonas fulva 12-X]
          Length = 579

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 235/596 (39%), Positives = 333/596 (55%), Gaps = 45/596 (7%)

Query: 476  SVRDYLSDVFTH-AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            S+R  +    T    +   P+    T  V +T +K     GDF  N AM L K    K  
Sbjct: 4    SIRHLIQQALTRLTAEGVLPDGLSPTIQVENTRDK---THGDFASNIAMMLAKPAGMK-- 58

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P D+AQ +   +       P+ A+ I K+E+A PGF+N F +     E+++  + + 
Sbjct: 59   ---PRDLAQKLIDAL-------PADAQ-ISKVEIAGPGFLNFFQNSDALAERLEAALADD 107

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV+        RV+VD SSPN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R NHVG
Sbjct: 108  HLGVRKN--GPAQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDEVIRQNHVG 165

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGML+A +++   +       +ADL+ FY+ +KKRFDE   F +RA   VV LQ 
Sbjct: 166  DWGTQFGMLLAFMEE---NPAAAESELADLEGFYRAAKKRFDESPEFAERARALVVELQA 222

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             +P+  + W     +S    QK YDRL V LT    +GES Y   +  +V  L  KGLL 
Sbjct: 223  GEPECMRLWNRFNAISLSHCQKAYDRLGVKLTPADVKGESAYNADLANVVADLRSKGLLT 282

Query: 769  LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +  KAD  +Y  D 
Sbjct: 283  EDNGAQCVFLDEYKNAEGNPLPVIVQKAGGGYLYSTTDLAAMRYRSQVLKADRALYFVDQ 342

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q +HF++  E A++AG ++     ++ +GFG + G D + FKTR G TVKL +LLDE  
Sbjct: 343  RQALHFQMAFEVARRAGFVHEGMD-LEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAE 401

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+ + +K KN   EL   EL +  +AV  G +KYADLS +R  DY F+F+ ML   GNT
Sbjct: 402  SRAYELVKAKN--PELDEAELRQIARAVGIGAVKYADLSKHRTSDYSFNFELMLSFEGNT 459

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A YLLYAYTR ASI R  G   ED+        + L   +E  LA  L +  +VL  V  
Sbjct: 460  APYLLYAYTRTASIFRKLGKGIEDI-----GGHIELHAPQEIELAGKLAQFGEVLGSVAD 514

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
                H LC YLYD++  FS FY++C  +  + EG  ++    RL LA  T + +K+
Sbjct: 515  KGTPHLLCAYLYDVAGLFSSFYEHCPVLSAEDEGTRQS----RLRLAALTRRTLKQ 566



 Score =  226 bits (577), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/361 (38%), Positives = 200/361 (55%), Gaps = 33/361 (9%)

Query: 86  SVRDYLSDVFTH-AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           S+R  +    T    +   P+    T  V +T +K     GDF  N AM L K    K  
Sbjct: 4   SIRHLIQQALTRLTAEGVLPDGLSPTIQVENTRDK---THGDFASNIAMMLAKPAGMK-- 58

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P D+AQ +   +       P+ A+ I K+E+A PGF+N F +     E+++  + + 
Sbjct: 59  ---PRDLAQKLIDAL-------PADAQ-ISKVEIAGPGFLNFFQNSDALAERLEAALADD 107

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GV+        RV+VD SSPN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R NHVG
Sbjct: 108 HLGVRKN--GPAQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDEVIRQNHVG 165

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGML+A +++   +       +ADL+ FY+ +KKRFDE   F +RA   VV LQ 
Sbjct: 166 DWGTQFGMLLAFMEE---NPAAAESELADLEGFYRAAKKRFDESPEFAERARALVVELQA 222

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            +P+  + W     +S    QK YDRL V LT    +GES Y   +  +V  L  KGLL 
Sbjct: 223 GEPECMRLWNRFNAISLSHCQKAYDRLGVKLTPADVKGESAYNADLANVVADLRSKGLLT 282

Query: 379 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +  KAD  +Y  D 
Sbjct: 283 EDNGAQCVFLDEYKNAEGNPLPVIVQKAGGGYLYSTTDLAAMRYRSQVLKADRALYFVDQ 342

Query: 434 R 434
           R
Sbjct: 343 R 343



 Score =  226 bits (577), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/361 (38%), Positives = 200/361 (55%), Gaps = 33/361 (9%)

Query: 1103 SVRDYLSDVFTH-AVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            S+R  +    T    +   P+    T  V +T +K     GDF  N AM L K    K  
Sbjct: 4    SIRHLIQQALTRLTAEGVLPDGLSPTIQVENTRDK---THGDFASNIAMMLAKPAGMK-- 58

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P D+AQ +   +       P+ A+ I K+E+A PGF+N F +     E+++  + + 
Sbjct: 59   ---PRDLAQKLIDAL-------PADAQ-ISKVEIAGPGFLNFFQNSDALAERLEAALADD 107

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV+        RV+VD SSPN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R NHVG
Sbjct: 108  HLGVRKN--GPAQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDEVIRQNHVG 165

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGML+A +++   +       +ADL+ FY+ +KKRFDE   F +RA   VV LQ 
Sbjct: 166  DWGTQFGMLLAFMEE---NPAAAESELADLEGFYRAAKKRFDESPEFAERARALVVELQA 222

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             +P+  + W     +S    QK YDRL V LT    +GES Y   +  +V  L  KGLL 
Sbjct: 223  GEPECMRLWNRFNAISLSHCQKAYDRLGVKLTPADVKGESAYNADLANVVADLRSKGLLT 282

Query: 1396 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +  KAD  +Y  D 
Sbjct: 283  EDNGAQCVFLDEYKNAEGNPLPVIVQKAGGGYLYSTTDLAAMRYRSQVLKADRALYFVDQ 342

Query: 1451 R 1451
            R
Sbjct: 343  R 343


>gi|311279226|ref|YP_003941457.1| arginyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748421|gb|ADO48173.1| arginyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 577

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 224/567 (39%), Positives = 316/567 (55%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +    +   + +            V++D+S+PN+AKEMHVGH+RSTIIGD 
Sbjct: 82   FINIFLDPAFLASHVDAALASDRLGVAKQPAQTVVIDYSAPNVAKEMHVGHVRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R  E+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+++KK +
Sbjct: 142  SVRTQEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y+RLNVTLT     GES 
Sbjct: 201  DEDEAFAERARGYVVKLQGGDEYCREMWRKLVDITMTQNQITYERLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEAMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P+   ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYV-PDSVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G T+KLSELLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTIKLSELLDEALDRARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DY+F +D ML   GNTA Y+ YAYTR+ S+ R AGI    L  AA    V +  
Sbjct: 435  SKSRTTDYIFDWDLMLAFEGNTAPYMQYAYTRVLSVFRKAGIEESALASAA----VIISE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            ++E  LA  LL+  + L +V RD   H +C YLYD++  FS FY++C  +  D+E     
Sbjct: 491  DREAQLAARLLQFEETLTVVARDGTPHVMCAYLYDLAGLFSGFYEHCPILSADSE----A 546

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K   D L I T
Sbjct: 547  VRNSRLKLALLTAKTLKLGLDTLGIET 573



 Score =  220 bits (561), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 183/331 (55%), Gaps = 28/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA+ K          P  +A+ + S        +  L  +  K+E+A PG
Sbjct: 35  QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +    +   + +            V++D+S+PN+AKEMHVGH+RSTIIGD 
Sbjct: 82  FINIFLDPAFLASHVDAALASDRLGVAKQPAQTVVIDYSAPNVAKEMHVGHVRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R  E+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+++KK +
Sbjct: 142 SVRTQEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y+RLNVTLT     GES 
Sbjct: 201 DEDEAFAERARGYVVKLQGGDEYCREMWRKLVDITMTQNQITYERLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEAMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQA 348



 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/330 (37%), Positives = 182/330 (55%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA+ K          P  +A+ + S        +  L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMAVAKKLG-----MAPRQLAEQVLS--------HLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +    +   + +            V++D+S+PN+AKEMHVGH+RSTIIGD 
Sbjct: 82   FINIFLDPAFLASHVDAALASDRLGVAKQPAQTVVIDYSAPNVAKEMHVGHVRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R  E+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   ++DL+ FY+++KK +
Sbjct: 142  SVRTQEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ALSDLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D   ++ W  + D++    Q  Y+RLNVTLT     GES 
Sbjct: 201  DEDEAFAERARGYVVKLQGGDEYCREMWRKLVDITMTQNQITYERLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEAMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|333375134|ref|ZP_08466958.1| arginine--tRNA ligase [Kingella kingae ATCC 23330]
 gi|332971551|gb|EGK10501.1| arginine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 568

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/562 (39%), Positives = 323/562 (57%), Gaps = 41/562 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            K GDFQ N  M   K        +NP ++AQ +A     EL    ++A      EVA PG
Sbjct: 34   KHGDFQINGVMGAAK-----KAGQNPRELAQKVAD----ELHGKGAIASA----EVAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+ L+  +  E +    +N  + P       V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 81   FINLRLAADFLAENLNSGSLNIEKTPNPQT---VVIDYSSPNLAKEMHVGHLRSSIIGDS 137

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            ++R+L +LGH+V+R NHVGDWGTQFGML+A+L ++  D       +ADL+ FY+ +K RF
Sbjct: 138  LARVLAFLGHNVIRQNHVGDWGTQFGMLVAYLVEQQQD--NAEFKLADLEQFYRNAKVRF 195

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DED  F   A + VV LQ  D      W+   ++S +  + +Y +L + L      GES 
Sbjct: 196  DEDAAFADLAREYVVKLQGGDAAVLALWQQFVEISLQHAEAVYAKLGLKLQRADVAGESS 255

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   ++ ++  L  KGL    DG K+++      +D       + K  GGF Y T+D A 
Sbjct: 256  YNDDLQNVIDELTAKGLAVESDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDFAC 315

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +R R+ +  A+ ++YV D  Q +HF+ L   ++KAG L P     +F+GFG ++G+D K 
Sbjct: 316  MRYRVGKLGANRLMYVVDTRQDLHFKQLFSASRKAGWL-PENVSAEFIGFGTMMGKDGKP 374

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL +LLDE + R+   +++KN   +L+  E+++  + V  G +KYADLS N
Sbjct: 375  FKTRSGDTVKLVDLLDEAVERATALVREKN--ADLSAEEVAQIGEVVGIGAVKYADLSKN 432

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA YL YAYTR+ S+ + AG    +  V A    + LE   E
Sbjct: 433  RTSDYVFDWDNMLSFEGNTAPYLQYAYTRVQSVFKKAG----EWNVQA---ALKLEQPLE 485

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+  DV+  V      H+L  YLY ++T FS FY+ C  ++  A+G ++    
Sbjct: 486  QQLAVELLKFEDVVASVAETSYPHYLAAYLYQLATLFSRFYEACPILK--AQGDVR---D 540

Query: 1045 GRLLLAEATAKVMKKCFDILNI 1066
             RL LA+ TA+ MK   D+L I
Sbjct: 541  SRLKLAKLTAETMKTGLDLLGI 562



 Score =  212 bits (540), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/394 (34%), Positives = 206/394 (52%), Gaps = 29/394 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           K GDFQ N  M   K        +NP ++AQ +A     EL    ++A      EVA PG
Sbjct: 34  KHGDFQINGVMGAAK-----KAGQNPRELAQKVAD----ELHGKGAIASA----EVAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+ L+  +  E +    +N  + P       V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 81  FINLRLAADFLAENLNSGSLNIEKTPNPQT---VVIDYSSPNLAKEMHVGHLRSSIIGDS 137

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           ++R+L +LGH+V+R NHVGDWGTQFGML+A+L ++  D       +ADL+ FY+ +K RF
Sbjct: 138 LARVLAFLGHNVIRQNHVGDWGTQFGMLVAYLVEQQQD--NAEFKLADLEQFYRNAKVRF 195

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DED  F   A + VV LQ  D      W+   ++S +  + +Y +L + L      GES 
Sbjct: 196 DEDAAFADLAREYVVKLQGGDAAVLALWQQFVEISLQHAEAVYAKLGLKLQRADVAGESS 255

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   ++ ++  L  KGL    DG K+++      +D       + K  GGF Y T+D A 
Sbjct: 256 YNDDLQNVIDELTAKGLAVESDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDFAC 315

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
           +R R+ +  A+ ++YV D R      Q  +   K   +  + S++  G    M     P 
Sbjct: 316 MRYRVGKLGANRLMYVVDTRQDLHFKQLFSASRKAGWLPENVSAEFIGFGTMMGKDGKPF 375

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 505
           + R      L D+   AV+ A   + +K A +++
Sbjct: 376 KTRSGDTVKLVDLLDEAVERATALVREKNADLSA 409



 Score =  209 bits (531), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/320 (37%), Positives = 179/320 (55%), Gaps = 26/320 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            K GDFQ N  M   K        +NP ++AQ +A     EL    ++A      EVA PG
Sbjct: 34   KHGDFQINGVMGAAK-----KAGQNPRELAQKVAD----ELHGKGAIASA----EVAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+ L+  +  E +    +N  + P       V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 81   FINLRLAADFLAENLNSGSLNIEKTPNPQT---VVIDYSSPNLAKEMHVGHLRSSIIGDS 137

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            ++R+L +LGH+V+R NHVGDWGTQFGML+A+L ++  D       +ADL+ FY+ +K RF
Sbjct: 138  LARVLAFLGHNVIRQNHVGDWGTQFGMLVAYLVEQQQD--NAEFKLADLEQFYRNAKVRF 195

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DED  F   A + VV LQ  D      W+   ++S +  + +Y +L + L      GES 
Sbjct: 196  DEDAAFADLAREYVVKLQGGDAAVLALWQQFVEISLQHAEAVYAKLGLKLQRADVAGESS 255

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   ++ ++  L  KGL    DG K+++      +D       + K  GGF Y T+D A 
Sbjct: 256  YNDDLQNVIDELTAKGLAVESDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDFAC 315

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
            +R R+ +  A+ ++YV D R
Sbjct: 316  MRYRVGKLGANRLMYVVDTR 335


>gi|372269177|ref|ZP_09505225.1| arginyl-tRNA synthetase [Alteromonas sp. S89]
          Length = 578

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/608 (38%), Positives = 338/608 (55%), Gaps = 48/608 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++R  L+D+F    Q A    G       +        FGD+Q N AMA  K       
Sbjct: 1    MNIRQQLNDIF----QTAMTNAGIPAECSPAVAPAKKAGFGDYQANGAMAAAKKVG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------K 588
              NP    + +A+ +   L   P    +I+K+EVA PGF+N+ L+  + G+ +      +
Sbjct: 53   -TNP----RELAAKIIDNLGEQP----MIEKVEVAGPGFINIHLNDAWLGKTLATARADE 103

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             + +  V  P       V++D+S PN+AKEMHVGHLR+TIIGD ++RLLE+ GH VVR N
Sbjct: 104  RLNIAAVASPE-----TVVLDYSHPNLAKEMHVGHLRTTIIGDALARLLEFQGHKVVRQN 158

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            H+GDWGTQFGML+AHL D+  +       +ADL+ FY+E+K RFDE+E F  RA + VV 
Sbjct: 159  HMGDWGTQFGMLLAHLADQMENQ-DAEVALADLEVFYREAKVRFDEEEGFADRAREYVVK 217

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
            LQ  D D  K W+   D+S    ++IY++L VTL       ES Y   +  LV  L  +G
Sbjct: 218  LQGGDADCLKLWQRFIDISISHAEEIYEKLGVTLKREDVYAESQYNDDLPVLVKDLLDRG 277

Query: 766  LLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +   D G  + +     +  G+  + I+ K  GG+ Y T+DLAAIR R     A+ I+Y+
Sbjct: 278  IAVEDQGAIVAFLPEMADKEGNPSVVIIQKKGGGYLYATTDLAAIRYRANVLNANRILYI 337

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +H +     A+KAG +  ++T ++   FG ++G+D K FKTRSG TVKL+ LLD
Sbjct: 338  VDARQSLHLQQAFTVARKAGYIADSQT-LEHCAFGTMMGDDGKPFKTRSGGTVKLAALLD 396

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E + R+   + DKN   EL+  E +E  + V  G +KYADLS  R  DYVF+++ ML   
Sbjct: 397  EAVERATALVADKN--PELSAEEQAEIGRVVGIGAVKYADLSKTRTNDYVFNWNAMLAFE 454

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YL YAYTR+ SI R AGI       +A +  ++L  + E ALA  L +  +VL  
Sbjct: 455  GNTAPYLQYAYTRVRSIFRRAGIEP-----SALTGDITLGTDAERALAIKLNQFGEVLDQ 509

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
            V +D   H LC YLY++++A+  FY+ C  ++   EG  +     RL L +  A+ +   
Sbjct: 510  VAKDTFPHVLCTYLYELASAYMAFYEACPVLK---EGVTEEEKQSRLQLCDLVARTLSTG 566

Query: 1061 FDILNIRT 1068
              +L I T
Sbjct: 567  LGLLGIET 574



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/446 (34%), Positives = 228/446 (51%), Gaps = 40/446 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++R  L+D+F    Q A    G       +        FGD+Q N AMA  K       
Sbjct: 1   MNIRQQLNDIF----QTAMTNAGIPAECSPAVAPAKKAGFGDYQANGAMAAAKKVG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------K 198
             NP    + +A+ +   L   P    +I+K+EVA PGF+N+ L+  + G+ +      +
Sbjct: 53  -TNP----RELAAKIIDNLGEQP----MIEKVEVAGPGFINIHLNDAWLGKTLATARADE 103

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            + +  V  P       V++D+S PN+AKEMHVGHLR+TIIGD ++RLLE+ GH VVR N
Sbjct: 104 RLNIAAVASPE-----TVVLDYSHPNLAKEMHVGHLRTTIIGDALARLLEFQGHKVVRQN 158

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           H+GDWGTQFGML+AHL D+  +       +ADL+ FY+E+K RFDE+E F  RA + VV 
Sbjct: 159 HMGDWGTQFGMLLAHLADQMENQ-DAEVALADLEVFYREAKVRFDEEEGFADRAREYVVK 217

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
           LQ  D D  K W+   D+S    ++IY++L VTL       ES Y   +  LV  L  +G
Sbjct: 218 LQGGDADCLKLWQRFIDISISHAEEIYEKLGVTLKREDVYAESQYNDDLPVLVKDLLDRG 277

Query: 376 LLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +   D G  + +     +  G+  + I+ K  GG+ Y T+DLAAIR R     A+ I+Y+
Sbjct: 278 IAVEDQGAIVAFLPEMADKEGNPSVVIIQKKGGGYLYATTDLAAIRYRANVLNANRILYI 337

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTH 487
            D R    + QA     K   I+ S + +       M     P + R      L+ +   
Sbjct: 338 VDARQSLHLQQAFTVARKAGYIADSQTLEHCAFGTMMGDDGKPFKTRSGGTVKLAALLDE 397

Query: 488 AVQVAFPELGDKTASVASTNEKYVHK 513
           AV+ A   + DK   +++  +  + +
Sbjct: 398 AVERATALVADKNPELSAEEQAEIGR 423



 Score =  226 bits (576), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 199/364 (54%), Gaps = 37/364 (10%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++R  L+D+F    Q A    G       +        FGD+Q N AMA  K       
Sbjct: 1    MNIRQQLNDIF----QTAMTNAGIPAECSPAVAPAKKAGFGDYQANGAMAAAKKVG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------K 1215
              NP    + +A+ +   L   P    +I+K+EVA PGF+N+ L+  + G+ +      +
Sbjct: 53   -TNP----RELAAKIIDNLGEQP----MIEKVEVAGPGFINIHLNDAWLGKTLATARADE 103

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             + +  V  P       V++D+S PN+AKEMHVGHLR+TIIGD ++RLLE+ GH VVR N
Sbjct: 104  RLNIAAVASPE-----TVVLDYSHPNLAKEMHVGHLRTTIIGDALARLLEFQGHKVVRQN 158

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            H+GDWGTQFGML+AHL D+  +       +ADL+ FY+E+K RFDE+E F  RA + VV 
Sbjct: 159  HMGDWGTQFGMLLAHLADQMENQ-DAEVALADLEVFYREAKVRFDEEEGFADRAREYVVK 217

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
            LQ  D D  K W+   D+S    ++IY++L VTL       ES Y   +  LV  L  +G
Sbjct: 218  LQGGDADCLKLWQRFIDISISHAEEIYEKLGVTLKREDVYAESQYNDDLPVLVKDLLDRG 277

Query: 1393 LLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +   D G  + +     +  G+  + I+ K  GG+ Y T+DLAAIR R     A+ I+Y+
Sbjct: 278  IAVEDQGAIVAFLPEMADKEGNPSVVIIQKKGGGYLYATTDLAAIRYRANVLNANRILYI 337

Query: 1448 TDHR 1451
             D R
Sbjct: 338  VDAR 341


>gi|384425054|ref|YP_005634412.1| arginyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
 gi|327484607|gb|AEA79014.1| Arginyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
          Length = 592

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 96

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 395

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 396  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKAAIANTVAMAAVKYADLSKH 453

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 454  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 508

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 509  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 564

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 565  SRLKLAALTAKTIKQGLALLGIDT 588



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 96

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 337 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 396

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 397 KTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKAAIANTVAMAAVKYADL 450



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 96

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQ 363


>gi|229524081|ref|ZP_04413486.1| arginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229337662|gb|EEO02679.1| arginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 599

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 322/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 402

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 403  FKTRAGGTVRLADLLDEAEERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 460

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 461  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 515

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+ ++ +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 516  KALIAKLLQFDEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 571

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 572  SRLKLAALTAKTIKQGLALLGIDT 595



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104 FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 344 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 403

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 404 KTRAGGTVRLADLLDEAEERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 457



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|226946552|ref|YP_002801625.1| arginyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511638|sp|C1DHR7.1|SYR_AZOVD RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|226721479|gb|ACO80650.1| arginyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 579

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/562 (39%), Positives = 323/562 (57%), Gaps = 53/562 (9%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K    K     P  +A+ + + + ++ +        + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGLK-----PRQLAEKLVAALPADAS--------VSKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLR 625
            N F        Q  D +   ++    +++L         RV+VD SSPN+AKEMHVGHLR
Sbjct: 88   NFF--------QNSDALARRLEVALADERLGVRKHGDLQRVVVDLSSPNLAKEMHVGHLR 139

Query: 626  STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 685
            STIIGD ++R+LE+LG  V+R NHVGDWGTQFGML+AHL++K     +    +ADL+ FY
Sbjct: 140  STIIGDAVARVLEFLGDVVIRQNHVGDWGTQFGMLLAHLEEK---PASAESELADLEQFY 196

Query: 686  KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 744
            + +KKRFDE E F  RA + VV LQ  +P+  + W+    +S    Q++Y+RL V LT  
Sbjct: 197  RAAKKRFDESEAFADRARELVVRLQAGEPECLRLWQRFNAISLSHCQEVYERLGVRLTPD 256

Query: 745  --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 797
              RGES Y   +  +V  L  KGLL   +G + ++       +   +P+ + K+ GG+ Y
Sbjct: 257  DIRGESAYNDELPGIVQALRDKGLLTESEGAQCVFLDEFRNAEGNPLPVIVQKAGGGYLY 316

Query: 798  DTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
             T+DLA++R R +  KAD ++Y  D  Q +HF++    A++AG +  + T ++ +GFG +
Sbjct: 317  ATTDLASMRYRSQVLKADRVLYFVDQRQALHFQMTFAVARRAGFVR-DDTALEHMGFGTM 375

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIK 917
             G D + FKTR G TVKL +LLDE  +R+   +K KN   EL   EL    +AV  G +K
Sbjct: 376  NGADGRPFKTRDGGTVKLIDLLDEAEQRAYALVKGKN--PELPEEELRHIARAVGIGAVK 433

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
            YADLS +R  DY F+F+ ML   GNTA YLLYAYTR+AS+ R  G   +++      +P 
Sbjct: 434  YADLSKHRTSDYSFNFELMLSFEGNTAPYLLYAYTRVASVFRKLGREIDEI----DGSPA 489

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1037
              E  +E ALA  L +  +VL  V      H LC YLYD++  FS FY+NC  +  D   
Sbjct: 490  P-EAGQELALAARLAQFGEVLGNVAEKGLPHLLCAYLYDLAGLFSSFYENCPILTADTPA 548

Query: 1038 KIKTVHTGRLLLAEATAKVMKK 1059
            + ++    RLLLA  T + +++
Sbjct: 549  RQQS----RLLLAALTGRTLRQ 566



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 188/327 (57%), Gaps = 41/327 (12%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K    K     P  +A+ + + + ++ +        + K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAKPAGLK-----PRQLAEKLVAALPADAS--------VSKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLR 235
           N F        Q  D +   ++    +++L         RV+VD SSPN+AKEMHVGHLR
Sbjct: 88  NFF--------QNSDALARRLEVALADERLGVRKHGDLQRVVVDLSSPNLAKEMHVGHLR 139

Query: 236 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 295
           STIIGD ++R+LE+LG  V+R NHVGDWGTQFGML+AHL++K     +    +ADL+ FY
Sbjct: 140 STIIGDAVARVLEFLGDVVIRQNHVGDWGTQFGMLLAHLEEK---PASAESELADLEQFY 196

Query: 296 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 354
           + +KKRFDE E F  RA + VV LQ  +P+  + W+    +S    Q++Y+RL V LT  
Sbjct: 197 RAAKKRFDESEAFADRARELVVRLQAGEPECLRLWQRFNAISLSHCQEVYERLGVRLTPD 256

Query: 355 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 407
             RGES Y   +  +V  L  KGLL   +G + ++       +   +P+ + K+ GG+ Y
Sbjct: 257 DIRGESAYNDELPGIVQALRDKGLLTESEGAQCVFLDEFRNAEGNPLPVIVQKAGGGYLY 316

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTDHR 434
            T+DLA++R R +  KAD ++Y  D R
Sbjct: 317 ATTDLASMRYRSQVLKADRVLYFVDQR 343



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 188/327 (57%), Gaps = 41/327 (12%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K    K     P  +A+ + + + ++ +        + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGLK-----PRQLAEKLVAALPADAS--------VSKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLR 1252
            N F        Q  D +   ++    +++L         RV+VD SSPN+AKEMHVGHLR
Sbjct: 88   NFF--------QNSDALARRLEVALADERLGVRKHGDLQRVVVDLSSPNLAKEMHVGHLR 139

Query: 1253 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 1312
            STIIGD ++R+LE+LG  V+R NHVGDWGTQFGML+AHL++K     +    +ADL+ FY
Sbjct: 140  STIIGDAVARVLEFLGDVVIRQNHVGDWGTQFGMLLAHLEEK---PASAESELADLEQFY 196

Query: 1313 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 1371
            + +KKRFDE E F  RA + VV LQ  +P+  + W+    +S    Q++Y+RL V LT  
Sbjct: 197  RAAKKRFDESEAFADRARELVVRLQAGEPECLRLWQRFNAISLSHCQEVYERLGVRLTPD 256

Query: 1372 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 1424
              RGES Y   +  +V  L  KGLL   +G + ++       +   +P+ + K+ GG+ Y
Sbjct: 257  DIRGESAYNDELPGIVQALRDKGLLTESEGAQCVFLDEFRNAEGNPLPVIVQKAGGGYLY 316

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             T+DLA++R R +  KAD ++Y  D R
Sbjct: 317  ATTDLASMRYRSQVLKADRVLYFVDQR 343


>gi|429885804|ref|ZP_19367379.1| Arginyl-tRNA synthetase [Vibrio cholerae PS15]
 gi|429227322|gb|EKY33353.1| Arginyl-tRNA synthetase [Vibrio cholerae PS15]
          Length = 592

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 96

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 395

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 396  FKTRAGGTVRLADLLDEAEERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 453

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 454  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 508

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 509  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 564

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 565  SRLKLAALTAKTIKQGLALLGIDT 588



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 96

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 337 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 396

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 397 KTRAGGTVRLADLLDEAEERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 450



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 96

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 97   FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 156

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 157  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 216

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 217  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 276

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 277  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 336

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 337  AKYRYETLGADRVLYFIDSRQHQHLMQ 363


>gi|153213687|ref|ZP_01948939.1| arginyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153801962|ref|ZP_01956548.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124115748|gb|EAY34568.1| arginyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124122476|gb|EAY41219.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 599

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 402

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 403  FKTRAGGTVRLADLLDEAQERAKALIESKN--LELSAEEKANIANTVAMAAVKYADLSKH 460

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 461  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 515

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 516  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 571

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 572  SRLKLAALTAKTIKQGLALLGIDT 595



 Score =  239 bits (610), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104 FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 344 AKYRYETLGADRVLYFIDSRQHQHLMQA 371



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|424660587|ref|ZP_18097834.1| arginyl-tRNA synthetase [Vibrio cholerae HE-16]
 gi|408050317|gb|EKG85482.1| arginyl-tRNA synthetase [Vibrio cholerae HE-16]
          Length = 577

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 320/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVVQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELPAEEKANIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLALLGIDT 573



 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAAQAEAALADARLGVVQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 381

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAQERAKALIESKNPELPAEEKANIANTVAMAAVKYADL 435



 Score =  238 bits (606), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADARLGVVQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|59711446|ref|YP_204222.1| arginyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354336|sp|Q5E6L2.1|SYR_VIBF1 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|59479547|gb|AAW85334.1| arginyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 577

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/564 (37%), Positives = 325/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADERLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F   A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVTARGYVVKLQSGDEFCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL    +G ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNSMLAPIVADLQKQGLAVESEGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   +++KN+  +L+  E ++    VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERATKLIEEKNK--DLSAEEKAKIATTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L     +  V +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFSKAGLSMDEL-----TGEVKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V  +   H +C YL++++  FS FY+ C  +  + +     V  
Sbjct: 494  KALVAKLMQFEEAVQAVASEGQPHLMCAYLFELAGQFSSFYEACPILNNEDDA----VKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  ++L I T
Sbjct: 550  SRLKLAALTAKTIKQGLELLGIET 573



 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 130/328 (39%), Positives = 192/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADERLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F   A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVTARGYVVKLQSGDEFCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL    +G ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNSMLAPIVADLQKQGLAVESEGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELNADRVLYFIDSRQHQHLMQA 349



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 191/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADERLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F   A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVTARGYVVKLQSGDEFCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL    +G ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNSMLAPIVADLQKQGLAVESEGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELNADRVLYFIDSRQHQHLMQ 348


>gi|254229698|ref|ZP_04923107.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937743|gb|EDN56592.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 545

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 3    QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 49

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 50   FINIFLSEEFLAKQADAALADERLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 109

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 110  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 169

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 170  DEDEEFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 229

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 230  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 289

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 290  AKYRYEELSADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 348

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 349  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAMAAVKYSDLSKH 406

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  + L+       + +  EKE
Sbjct: 407  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDALQ-----GDIKITDEKE 461

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 462  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 517

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 518  SRLKLAALTAKTIKQGLSLLGIDT 541



 Score =  242 bits (618), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 3   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 49

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 50  FINIFLSEEFLAKQADAALADERLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 109

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 110 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 169

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 170 DEDEEFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 229

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 230 YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 289

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 290 AKYRYEELSADRVLYFIDSRQHQHLMQA 317



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 3    QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 49

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 50   FINIFLSEEFLAKQADAALADERLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 109

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 110  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 169

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 170  DEDEEFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 229

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 230  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 289

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 290  AKYRYEELSADRVLYFIDSRQHQHLMQ 316


>gi|262394871|ref|YP_003286725.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338465|gb|ACY52260.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 577

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADERLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELSADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  + L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDALQ-----GDIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  242 bits (618), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADAALADERLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELSADRVLYFIDSRQHQHLMQA 349



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADERLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELSADRVLYFIDSRQHQHLMQ 348


>gi|229513729|ref|ZP_04403191.1| arginyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229348910|gb|EEO13867.1| arginyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 599

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 402

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 403  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKTNIANTVAMAAVKYADLSKH 460

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 461  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 515

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 516  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 571

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 572  SRLKLAALTAKTIKQGLALLGIDT 595



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104 FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 344 AKYRYETLGADRVLYFIDSRQHQHLMQA 371



 Score =  237 bits (605), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|410087785|ref|ZP_11284486.1| Arginyl-tRNA synthetase [Morganella morganii SC01]
 gi|409765779|gb|EKN49882.1| Arginyl-tRNA synthetase [Morganella morganii SC01]
          Length = 576

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/605 (37%), Positives = 339/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD     +Q A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSD----KIQQALISAGAPLDCDAIVKQSAKAQFGDYQANGVMAAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P  +A+ +  ++         L  + +K E+A PGF+N+FLS  +   Q++  + + 
Sbjct: 53   -MPPRQLAEKVIELL--------DLDGIAEKTEIAGPGFINIFLSPDWLTTQLETALADD 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                T  + + + +D+S+PN+AK+MHVGHLRSTIIGD  +R  EYLGH V+R NHVGDWG
Sbjct: 104  KLGLTPVEPMTIAIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEYLGHKVIRCNHVGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE+F +RA   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNEDAGDMALADLEAFYREAKKHYDEDEVFAERARGYVVKLQGGDE 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 771
              +  W  + D++ +  Q+ Y+RLNVTLTE    GES Y   +  +V  L  + + E  +
Sbjct: 223  YCRTMWRKLVDITMQQNQETYNRLNVTLTEDDVMGESLYNDMLPGIVSDLLNRRIAEESE 282

Query: 772  GRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
            G  +++        GE  G I   I K DGG+ Y T+D+A  + R +   AD ++Y  D 
Sbjct: 283  GAIVVYLDEFKNKEGEPMGVI---IRKKDGGYLYTTTDIACAKYRHDVLHADRVLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTR+G T++LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMTLEHHMFGMMLGKDGKPFKTRAGGTIRLSDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +++KN  +++   EL +  + V  G +KYADLS +R  DY+F +D ML   GNT
Sbjct: 399  ERAEKLIREKN--SDMPEDELKQLAEVVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+AS+ + A I+++ L     + P+ L  ++E  LA  LL+  + +  V R
Sbjct: 457  APYMQYAYTRVASVFKRADIDADSL-----TQPIILTDDRERQLAARLLQFEETITAVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  T K +K   D 
Sbjct: 512  EGLPHMMCSYLYDLAGLFSGFYEHCPILAAESE----ELRQSRLKLALLTQKTLKAGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIGT 572



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 221/422 (52%), Gaps = 35/422 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD     +Q A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQAILSD----KIQQALISAGAPLDCDAIVKQSAKAQFGDYQANGVMAAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P  +A+ +  ++         L  + +K E+A PGF+N+FLS  +   Q++  + + 
Sbjct: 53  -MPPRQLAEKVIELL--------DLDGIAEKTEIAGPGFINIFLSPDWLTTQLETALADD 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
               T  + + + +D+S+PN+AK+MHVGHLRSTIIGD  +R  EYLGH V+R NHVGDWG
Sbjct: 104 KLGLTPVEPMTIAIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEYLGHKVIRCNHVGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE+F +RA   VV LQ  D 
Sbjct: 164 TQFGMLIAYLE-KMQNEDAGDMALADLEAFYREAKKHYDEDEVFAERARGYVVKLQGGDE 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 381
             +  W  + D++ +  Q+ Y+RLNVTLTE    GES Y   +  +V  L  + + E  +
Sbjct: 223 YCRTMWRKLVDITMQQNQETYNRLNVTLTEDDVMGESLYNDMLPGIVSDLLNRRIAEESE 282

Query: 382 GRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           G  +++        GE  G I   I K DGG+ Y T+D+A  + R +   AD ++Y  D 
Sbjct: 283 GAIVVYLDEFKNKEGEPMGVI---IRKKDGGYLYTTTDIACAKYRHDVLHADRVLYYIDS 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R +  ++QA     K   I  S + +       +     P + R      LSD+   AV+
Sbjct: 340 RQHQHLMQAWTIVRKAGYIPESMTLEHHMFGMMLGKDGKPFKTRAGGTIRLSDLLDEAVE 399

Query: 491 VA 492
            A
Sbjct: 400 RA 401



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/368 (36%), Positives = 203/368 (55%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD     +Q A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSD----KIQQALISAGAPLDCDAIVKQSAKAQFGDYQANGVMAAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P  +A+ +  ++         L  + +K E+A PGF+N+FLS  +   Q++  + + 
Sbjct: 53   -MPPRQLAEKVIELL--------DLDGIAEKTEIAGPGFINIFLSPDWLTTQLETALADD 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                T  + + + +D+S+PN+AK+MHVGHLRSTIIGD  +R  EYLGH V+R NHVGDWG
Sbjct: 104  KLGLTPVEPMTIAIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEYLGHKVIRCNHVGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE+F +RA   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNEDAGDMALADLEAFYREAKKHYDEDEVFAERARGYVVKLQGGDE 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 1398
              +  W  + D++ +  Q+ Y+RLNVTLTE    GES Y   +  +V  L  + + E  +
Sbjct: 223  YCRTMWRKLVDITMQQNQETYNRLNVTLTEDDVMGESLYNDMLPGIVSDLLNRRIAEESE 282

Query: 1399 GRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            G  +++        GE  G I   I K DGG+ Y T+D+A  + R +   AD ++Y  D 
Sbjct: 283  GAIVVYLDEFKNKEGEPMGVI---IRKKDGGYLYTTTDIACAKYRHDVLHADRVLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|451975389|ref|ZP_21926580.1| arginyl-tRNA synthetase [Vibrio alginolyticus E0666]
 gi|451930701|gb|EMD78404.1| arginyl-tRNA synthetase [Vibrio alginolyticus E0666]
          Length = 577

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADERLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVRLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYEELSADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E  +  + VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRAAQLIESKN--PELDAEEKEKISKTVAIAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG+  + L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVAMDALQ-----GDIKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIDT 573



 Score =  242 bits (618), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQADAALADERLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARNYVVRLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELSADRVLYFIDSRQHQHLMQA 349



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q    + +        +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQADAALADERLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  +ADL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARNYVVRLQSGDEYCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + ++V  L+++GL   DDG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLKEQGLAVEDDGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELSADRVLYFIDSRQHQHLMQ 348


>gi|419837797|ref|ZP_14361235.1| arginine--tRNA ligase [Vibrio cholerae HC-46B1]
 gi|421344581|ref|ZP_15794984.1| arginyl-tRNA synthetase [Vibrio cholerae HC-43B1]
 gi|422308021|ref|ZP_16395174.1| arginine--tRNA ligase [Vibrio cholerae CP1035(8)]
 gi|423735751|ref|ZP_17708947.1| arginine--tRNA ligase [Vibrio cholerae HC-41B1]
 gi|424010089|ref|ZP_17753025.1| arginine--tRNA ligase [Vibrio cholerae HC-44C1]
 gi|395940661|gb|EJH51342.1| arginyl-tRNA synthetase [Vibrio cholerae HC-43B1]
 gi|408618690|gb|EKK91755.1| arginine--tRNA ligase [Vibrio cholerae CP1035(8)]
 gi|408629609|gb|EKL02290.1| arginine--tRNA ligase [Vibrio cholerae HC-41B1]
 gi|408856345|gb|EKL96040.1| arginine--tRNA ligase [Vibrio cholerae HC-46B1]
 gi|408863617|gb|EKM03094.1| arginine--tRNA ligase [Vibrio cholerae HC-44C1]
          Length = 577

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 226/570 (39%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FLS  +   Q +    D+ +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 82   FINIFLSEEFLAAQAEAALADVRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 136  TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 195

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
            ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 196  ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 255

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 256  VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 315

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 316  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMML 374

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D + FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KY
Sbjct: 375  GKDGRPFKTRAGGTVRLADLLDEAEERAKALIESKN--PELSAEEKTNIANTVAMAAVKY 432

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + 
Sbjct: 433  ADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQ 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  EKE AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E  
Sbjct: 488  ITEEKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE-- 545

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              ++   RL LA  TAK +K+   +L I T
Sbjct: 546  --SIKQSRLKLAALTAKTIKQGLALLGIDT 573



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/334 (41%), Positives = 195/334 (58%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FLS  +   Q +    D+ +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 82  FINIFLSEEFLAAQAEAALADVRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 136 TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 195

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
           ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 196 ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 255

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 256 VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 315

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 316 TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/333 (41%), Positives = 194/333 (58%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FLS  +   Q +    D+ +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 82   FINIFLSEEFLAAQAEAALADVRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 136  TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 195

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
            ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 196  ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 255

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 256  VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 315

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 316  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|153826066|ref|ZP_01978733.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149740183|gb|EDM54336.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 599

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADTRLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 402

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 403  FKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 460

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 461  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 515

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 516  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 571

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 572  SRLKLAALTAKTIKQGLALLGIDT 595



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104 FINIFLSEEFLAAQAEAALADTRLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 344 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 403

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 404 KTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 457



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADTRLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 163

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|418288680|ref|ZP_12901131.1| arginyl-tRNA synthetase [Neisseria meningitidis NM233]
 gi|372201340|gb|EHP15280.1| arginyl-tRNA synthetase [Neisseria meningitidis NM233]
          Length = 572

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 236/563 (41%), Positives = 318/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R  G    D        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKTGEWDAD-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/418 (37%), Positives = 217/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|254805273|ref|YP_003083494.1| arginyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668815|emb|CBA06810.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 572

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 236/563 (41%), Positives = 318/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDNLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/418 (37%), Positives = 216/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIHAALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDNLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  217 bits (553), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 185/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDNLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|422359601|ref|ZP_16440238.1| arginyl-tRNA synthetase, partial [Escherichia coli MS 110-3]
 gi|315286577|gb|EFU46012.1| arginyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 543

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/527 (40%), Positives = 305/527 (57%), Gaps = 35/527 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FG++Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGNYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 801
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV-PESVPLEHHMFGMMLGKD 376

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             K FKTR+G TVKL++LLDE L R+   + +KN   ++   EL +   AV  G +KYADL
Sbjct: 377  GKPFKTRAGGTVKLADLLDEALERARRLVAEKN--PDMPADELEKLANAVGIGAVKYADL 434

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR  DY+F +D ML   GNTA Y+ YAYTR+ S+ R A I+ E L  A    PV +  
Sbjct: 435  SKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAA----PVIIRE 490

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNC 1028
            ++E  LA  LL+  + L +V R+   H +C YLYD++  FS FY++C
Sbjct: 491  DREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHC 537



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 191/333 (57%), Gaps = 28/333 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FG++Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35  QFGNYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
             R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142 AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201 DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 411
           Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261 YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +A  + R E   AD ++Y  D R +  ++QA A
Sbjct: 318 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWA 350



 Score =  233 bits (593), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 189/330 (57%), Gaps = 28/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FG++Q N  MA+ K          P  +A+ +         T+  L  +  K+E+A PG
Sbjct: 35   QFGNYQANGMMAVAKKLG-----MAPRQLAEQVL--------THLDLNGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  E ++  + +      + +K  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
              R LE+LGH V+R NHVGDWGTQFGMLIA L+ +  +   +   +ADL+ FY+++KK +
Sbjct: 142  AVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEM-ELADLEGFYRDAKKHY 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F +RA   VV LQ  D  +++ W  + D++    Q  YDRLNVTLT     GES 
Sbjct: 201  DEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESL 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSD 1428
            Y   +  +V  L+ KGL    +G  +++        GE  G I   I K DGG+ Y T+D
Sbjct: 261  YNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVI---IQKKDGGYLYTTTD 317

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 318  IACAKYRYETLHADRVLYYIDSRQHQHLMQ 347


>gi|452748491|ref|ZP_21948270.1| arginyl-tRNA ligase [Pseudomonas stutzeri NF13]
 gi|452007665|gb|EMD99918.1| arginyl-tRNA ligase [Pseudomonas stutzeri NF13]
          Length = 579

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 236/597 (39%), Positives = 336/597 (56%), Gaps = 49/597 (8%)

Query: 481  LSDVFTHAVQVAFPELGDKTA---------SVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            + D   H +Q A   L D+            V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTDEGVLPAGLTPAIQVENTRDK---SHGDFASNIAMMLAKPAGL 57

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-SRVYAGEQIKDI 590
            K     P D+A+ + + +       P  A+ I K+E+A PGF+N F  S   AG     +
Sbjct: 58   K-----PRDLAEKLITAL-------PQDAQ-ISKVEIAGPGFLNFFQNSDALAGRLEAAL 104

Query: 591  IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
                +         RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R NHV
Sbjct: 105  ADPHLSVRKAGAAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEHLGDEVIRQNHV 164

Query: 651  GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            GDWGTQFGML+A+L++K          ++DL+ FY+ +K+RFDE   F  RA + VV LQ
Sbjct: 165  GDWGTQFGMLLAYLEEKPA---AAESELSDLEQFYRTAKQRFDESAEFADRARELVVKLQ 221

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 767
              D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L +KGLL
Sbjct: 222  AGDAQCLGLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNADLAGIVESLREKGLL 281

Query: 768  ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R ++  AD ++Y  D
Sbjct: 282  TEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVD 341

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              Q +HF++  E A++AG ++    +++ +GFG + G D + FKTR G TVKL +LLDE 
Sbjct: 342  QRQALHFQMAFEVARRAGFVHEG-MQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEA 400

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
             +R+   +K KN   +L   EL +  +AV    +KYADLS +R  DY F+F+ ML   GN
Sbjct: 401  EQRAYALVKGKN--PDLDEAELRQIARAVGISAVKYADLSKHRTSDYRFNFELMLSFEGN 458

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA YLLYAYTR+AS+ R  G   ++   A Q   + LE E+E ALA  L +  +VL  V+
Sbjct: 459  TAPYLLYAYTRVASVFRKLGKGIDE--TAGQ---IQLEAEQELALAAKLAQFGEVLNSVS 513

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
                 H LC YLYD++  FS FY++C  +  + E + ++    RL LA  T K +K+
Sbjct: 514  EKGEPHLLCAYLYDLAGLFSSFYEHCPILSAEQEEQKRS----RLRLAALTGKTLKQ 566



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/362 (38%), Positives = 197/362 (54%), Gaps = 37/362 (10%)

Query: 91  LSDVFTHAVQVAFPELGDKTA---------SVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           + D   H +Q A   L D+            V +T +K     GDF  N AM L K    
Sbjct: 1   MKDSIRHLIQQALVRLTDEGVLPAGLTPAIQVENTRDK---SHGDFASNIAMMLAKPAGL 57

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-SRVYAGEQIKDI 200
           K     P D+A+ + + +       P  A+ I K+E+A PGF+N F  S   AG     +
Sbjct: 58  K-----PRDLAEKLITAL-------PQDAQ-ISKVEIAGPGFLNFFQNSDALAGRLEAAL 104

Query: 201 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
               +         RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R NHV
Sbjct: 105 ADPHLSVRKAGAAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEHLGDEVIRQNHV 164

Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           GDWGTQFGML+A+L++K          ++DL+ FY+ +K+RFDE   F  RA + VV LQ
Sbjct: 165 GDWGTQFGMLLAYLEEKPA---AAESELSDLEQFYRTAKQRFDESAEFADRARELVVKLQ 221

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 377
             D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L +KGLL
Sbjct: 222 AGDAQCLGLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNADLAGIVESLREKGLL 281

Query: 378 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R ++  AD ++Y  D
Sbjct: 282 TEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVD 341

Query: 433 HR 434
            R
Sbjct: 342 QR 343



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/362 (38%), Positives = 197/362 (54%), Gaps = 37/362 (10%)

Query: 1108 LSDVFTHAVQVAFPELGDKTA---------SVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            + D   H +Q A   L D+            V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTDEGVLPAGLTPAIQVENTRDK---SHGDFASNIAMMLAKPAGL 57

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFL-SRVYAGEQIKDI 1217
            K     P D+A+ + + +       P  A+ I K+E+A PGF+N F  S   AG     +
Sbjct: 58   K-----PRDLAEKLITAL-------PQDAQ-ISKVEIAGPGFLNFFQNSDALAGRLEAAL 104

Query: 1218 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
                +         RV++D SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V+R NHV
Sbjct: 105  ADPHLSVRKAGAAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEHLGDEVIRQNHV 164

Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            GDWGTQFGML+A+L++K          ++DL+ FY+ +K+RFDE   F  RA + VV LQ
Sbjct: 165  GDWGTQFGMLLAYLEEKPA---AAESELSDLEQFYRTAKQRFDESAEFADRARELVVKLQ 221

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 1394
              D      W    D+S    QKIYDRLNV LT    +GES Y   +  +V  L +KGLL
Sbjct: 222  AGDAQCLGLWTRFNDISLSHCQKIYDRLNVKLTPADVKGESAYNADLAGIVESLREKGLL 281

Query: 1395 ELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R ++  AD ++Y  D
Sbjct: 282  TEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVD 341

Query: 1450 HR 1451
             R
Sbjct: 342  QR 343


>gi|297579579|ref|ZP_06941507.1| arginyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297537173|gb|EFH76006.1| arginyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 599

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQESPKTIVADYSAPNVAKEMHVGHLRSTIIGDG 163

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMMLGKDGRP 402

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 403  FKTRAGGTVRLADLLDEAEERAKALIESKN--PELSAEEKANIANTVAMAAVKYADLSKH 460

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 461  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 515

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    ++  
Sbjct: 516  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SIKQ 571

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 572  SRLKLAALTAKTIKQGLALLGIDT 595



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/414 (36%), Positives = 221/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104 FINIFLSEEFLAAQAEAALADARLGVAQESPKTIVADYSAPNVAKEMHVGHLRSTIIGDG 163

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284 YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PV 471
            + R E   AD ++Y  D R +  ++QA     K   I  + S +       +     P 
Sbjct: 344 AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPF 403

Query: 472 RDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
           + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 404 KTRAGGTVRLADLLDEAEERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 457



 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 104  FINIFLSEEFLAAQAEAALADARLGVAQESPKTIVADYSAPNVAKEMHVGHLRSTIIGDG 163

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 164  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLY 223

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 224  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 283

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 284  YNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIAC 343

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 344  AKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|304387091|ref|ZP_07369342.1| arginine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338840|gb|EFM04943.1| arginine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 572

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 319/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ IA      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKIADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  +VL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGATR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 217/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ IA      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKIADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 186/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ IA      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKIADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|389586292|dbj|GAB69021.1| arginyl-tRNA synthetase [Plasmodium cynomolgi strain B]
          Length = 599

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/611 (34%), Positives = 351/611 (57%), Gaps = 48/611 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC--------KIFKDK 532
            +  VF H++Q  FP + ++   V   N K    FG FQC  A A           IFK+ 
Sbjct: 8    IKQVFQHSIQKCFPSISEEVV-VTYANAK----FGHFQCKRANACITYARNNAINIFKNH 62

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR---------VYA 583
            G++ N  + AQ ++ ++   ++ N       ++I+ +  GF+ V LS+         +Y 
Sbjct: 63   GKELNV-ESAQKLSQMIIENISEN-----FFEEIKSSPQGFITVKLSKEYIEKSLLKLYK 116

Query: 584  GEQIK-DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 642
              +I+  + +N V+        +VLVDFSSPNIAKEMHVGHLRSTI+GD+I ++ E+L  
Sbjct: 117  NNKIEISVNINEVKGVNDGDYKKVLVDFSSPNIAKEMHVGHLRSTILGDSICKIFEFLNV 176

Query: 643  DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 702
            + +R+NHVGDWGTQFGM+I ++   +P+Y    P + +L + Y+E+KK +D D+ F+K A
Sbjct: 177  ETLRVNHVGDWGTQFGMIINYIFSNYPNYKENMPDLTNLTSLYQEAKKMYDADKEFEKNA 236

Query: 703  YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE 762
                + LQ  D D    W+ +C+ S+++F K+Y  L++ L   GES+Y   +  ++  L+
Sbjct: 237  KNYAIKLQNNDEDCVFIWKKLCESSKKEFDKLYKILDINLEYVGESYYISMISSVLQMLK 296

Query: 763  KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
             + LL  + G  I +  ++ ++P+ + KS+GGF YD++D+AA+  R+++  +D I+YVTD
Sbjct: 297  DEQLLT-NVGDAICYQSEKFNVPLFLQKSNGGFGYDSTDVAALHYRLKKLNSDCIIYVTD 355

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
             GQ  HF  + + AKKA      KT++  VGFG+VL  D KKFKTRSG T+KL  L++EG
Sbjct: 356  NGQLSHFETIFDLAKKAK-WTSEKTKLVHVGFGLVLNADNKKFKTRSGTTIKLINLINEG 414

Query: 883  LRRS----LDK--LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKM 936
              R+    L++  LK +   +     ++ +  + +    IKY D+  +RN DY FS+D M
Sbjct: 415  TERAKKDLLERIQLKSEEEKSYFKGIDIDQLSEQLCVSAIKYFDIKQHRNSDYKFSYDNM 474

Query: 937  LDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMND 996
            L+ +GNT +Y++YAY+R+ SI R   ++ ++L        ++L    E  L   +L+  D
Sbjct: 475  LNVKGNTGLYIIYAYSRMCSIFRKCSVDMDEL----SKDELNLVSPYEVNLGLHILKFPD 530

Query: 997  VLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
            V   + +++ +H L EY Y+++T F+ FY+NC  +  + E   KT    RL+L      +
Sbjct: 531  VFYFILKNMLIHKLAEYTYELTTIFTAFYENCKVLNSENE---KT----RLILCAIAKSL 583

Query: 1057 MKKCFDILNIR 1067
            ++ C  +L + 
Sbjct: 584  LQICLKLLGLN 594



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/361 (35%), Positives = 213/361 (59%), Gaps = 30/361 (8%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC--------KIFKDK 142
           +  VF H++Q  FP + ++   V   N K    FG FQC  A A           IFK+ 
Sbjct: 8   IKQVFQHSIQKCFPSISEEVV-VTYANAK----FGHFQCKRANACITYARNNAINIFKNH 62

Query: 143 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR---------VYA 193
           G++ N  + AQ ++ ++   ++ N       ++I+ +  GF+ V LS+         +Y 
Sbjct: 63  GKELNV-ESAQKLSQMIIENISEN-----FFEEIKSSPQGFITVKLSKEYIEKSLLKLYK 116

Query: 194 GEQIK-DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 252
             +I+  + +N V+        +VLVDFSSPNIAKEMHVGHLRSTI+GD+I ++ E+L  
Sbjct: 117 NNKIEISVNINEVKGVNDGDYKKVLVDFSSPNIAKEMHVGHLRSTILGDSICKIFEFLNV 176

Query: 253 DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 312
           + +R+NHVGDWGTQFGM+I ++   +P+Y    P + +L + Y+E+KK +D D+ F+K A
Sbjct: 177 ETLRVNHVGDWGTQFGMIINYIFSNYPNYKENMPDLTNLTSLYQEAKKMYDADKEFEKNA 236

Query: 313 YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE 372
               + LQ  D D    W+ +C+ S+++F K+Y  L++ L   GES+Y   +  ++  L+
Sbjct: 237 KNYAIKLQNNDEDCVFIWKKLCESSKKEFDKLYKILDINLEYVGESYYISMISSVLQMLK 296

Query: 373 KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
            + LL  + G  I +  ++ ++P+ + KS+GGF YD++D+AA+  R+++  +D I+YVTD
Sbjct: 297 DEQLLT-NVGDAICYQSEKFNVPLFLQKSNGGFGYDSTDVAALHYRLKKLNSDCIIYVTD 355

Query: 433 H 433
           +
Sbjct: 356 N 356



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/361 (35%), Positives = 213/361 (59%), Gaps = 30/361 (8%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALC--------KIFKDK 1159
            +  VF H++Q  FP + ++   V   N K    FG FQC  A A           IFK+ 
Sbjct: 8    IKQVFQHSIQKCFPSISEEVV-VTYANAK----FGHFQCKRANACITYARNNAINIFKNH 62

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR---------VYA 1210
            G++ N  + AQ ++ ++   ++ N       ++I+ +  GF+ V LS+         +Y 
Sbjct: 63   GKELNV-ESAQKLSQMIIENISEN-----FFEEIKSSPQGFITVKLSKEYIEKSLLKLYK 116

Query: 1211 GEQIK-DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGH 1269
              +I+  + +N V+        +VLVDFSSPNIAKEMHVGHLRSTI+GD+I ++ E+L  
Sbjct: 117  NNKIEISVNINEVKGVNDGDYKKVLVDFSSPNIAKEMHVGHLRSTILGDSICKIFEFLNV 176

Query: 1270 DVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRA 1329
            + +R+NHVGDWGTQFGM+I ++   +P+Y    P + +L + Y+E+KK +D D+ F+K A
Sbjct: 177  ETLRVNHVGDWGTQFGMIINYIFSNYPNYKENMPDLTNLTSLYQEAKKMYDADKEFEKNA 236

Query: 1330 YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLE 1389
                + LQ  D D    W+ +C+ S+++F K+Y  L++ L   GES+Y   +  ++  L+
Sbjct: 237  KNYAIKLQNNDEDCVFIWKKLCESSKKEFDKLYKILDINLEYVGESYYISMISSVLQMLK 296

Query: 1390 KKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
             + LL  + G  I +  ++ ++P+ + KS+GGF YD++D+AA+  R+++  +D I+YVTD
Sbjct: 297  DEQLLT-NVGDAICYQSEKFNVPLFLQKSNGGFGYDSTDVAALHYRLKKLNSDCIIYVTD 355

Query: 1450 H 1450
            +
Sbjct: 356  N 356


>gi|423685568|ref|ZP_17660376.1| arginyl-tRNA synthetase [Vibrio fischeri SR5]
 gi|371495480|gb|EHN71076.1| arginyl-tRNA synthetase [Vibrio fischeri SR5]
          Length = 577

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/564 (37%), Positives = 325/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADERLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F   A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVTARGYVVKLQGGDEFCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL    +G ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNSMLAPIVADLQKQGLAVESEGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   +++KN+  +L+  E ++    VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERATKLIEEKNK--DLSAEEKAKIATTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L     +  V +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFSKAGLSMDEL-----TGEVKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V  +   H +C YL++++  FS FY+ C  +  + +     V  
Sbjct: 494  KALVAKLMQFEEAVQAVASEGQPHLMCAYLFELAGQFSSFYEACPILNNEDD----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  ++L I T
Sbjct: 550  SRLKLAALTAKTIKQGLELLGIET 573



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 130/328 (39%), Positives = 192/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADERLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F   A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVTARGYVVKLQGGDEFCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL    +G ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNSMLAPIVADLQKQGLAVESEGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELNADRVLYFIDSRQHQHLMQA 349



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 191/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADERLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F   A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVTARGYVVKLQGGDEFCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL    +G ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNSMLAPIVADLQKQGLAVESEGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELNADRVLYFIDSRQHQHLMQ 348


>gi|409395518|ref|ZP_11246588.1| arginyl-tRNA ligase [Pseudomonas sp. Chol1]
 gi|409395616|ref|ZP_11246679.1| arginyl-tRNA ligase [Pseudomonas sp. Chol1]
 gi|409119771|gb|EKM96146.1| arginyl-tRNA ligase [Pseudomonas sp. Chol1]
 gi|409119900|gb|EKM96272.1| arginyl-tRNA ligase [Pseudomonas sp. Chol1]
          Length = 579

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/572 (40%), Positives = 336/572 (58%), Gaps = 46/572 (8%)

Query: 500  TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 559
            T  V +T +K     GDF  N AM L K    K     P ++A+ +       +A  P  
Sbjct: 29   TIQVENTKDK---SHGDFASNIAMMLAKPAGLK-----PRELAEKL-------IAALPQD 73

Query: 560  AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNI 615
            A+V  K+E+A PGF+N F +     E+++  + +   P    +K+    RV++D SSPN+
Sbjct: 74   AQV-SKVEIAGPGFLNFFQNTAALAERLEAALAD---PQLAVRKVGAAQRVVIDLSSPNL 129

Query: 616  AKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS 675
            AKEMHVGHLRSTIIGD ++R+L +LG DV+R NHVGDWGTQFGML+A+L+++ P      
Sbjct: 130  AKEMHVGHLRSTIIGDAVARVLTFLGDDVIRQNHVGDWGTQFGMLLAYLEEQ-P--AAAE 186

Query: 676  PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIY 735
              +ADL+ FY+ +KKRFDE   F  RA + VV LQ  D +  + W+   DVS    Q +Y
Sbjct: 187  SELADLEQFYRAAKKRFDESAEFADRARELVVRLQAGDAECLRLWQRFNDVSLSHCQAVY 246

Query: 736  DRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMT 787
            DRL V+L+    +GES Y   +  +V  L  KGLL  DDG + ++       +   +P+ 
Sbjct: 247  DRLGVSLSPADVKGESAYNAELPGIVEALRAKGLLTEDDGAQCVFLDEFKNAEGNPLPVI 306

Query: 788  IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKT 847
            + K+ GG+ Y T+DLAA+R R +   AD ++Y  D  Q +HF++  E A++AG ++ +  
Sbjct: 307  VQKAGGGYLYATTDLAAMRYRSQVLHADRVLYFVDQRQALHFQMAFEVARRAGFVH-DGM 365

Query: 848  RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEA 907
            +++ +GFG + G D + FKTR G TVKL +LLDE  +R+   +K+KN   EL  +EL + 
Sbjct: 366  QLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEQRAYSLVKEKN--PELDESELRQI 423

Query: 908  QQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSED 967
             +AV    +KYADLS +R  DY F+F+ ML   GNTA YLLYAYTR+AS+ R  G  S++
Sbjct: 424  ARAVGISAVKYADLSKHRTSDYRFNFELMLSFEGNTAPYLLYAYTRVASVFRKLGKGSDE 483

Query: 968  LRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDN 1027
            +     +  + LE E+E ALA  L +  +VL  V      H LC YLYD++  FS FY++
Sbjct: 484  I-----TGHIRLEAEQELALAARLAQFGEVLNNVAAKGEPHQLCSYLYDLAGLFSSFYEH 538

Query: 1028 CYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            C  +  D   +  +    RL LA  T K +K+
Sbjct: 539  CPILGADQPEQKDS----RLRLAALTGKTLKQ 566



 Score =  221 bits (562), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 196/337 (58%), Gaps = 34/337 (10%)

Query: 110 TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 169
           T  V +T +K     GDF  N AM L K    K     P ++A+ +       +A  P  
Sbjct: 29  TIQVENTKDK---SHGDFASNIAMMLAKPAGLK-----PRELAEKL-------IAALPQD 73

Query: 170 AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNI 225
           A+V  K+E+A PGF+N F +     E+++  + +   P    +K+    RV++D SSPN+
Sbjct: 74  AQV-SKVEIAGPGFLNFFQNTAALAERLEAALAD---PQLAVRKVGAAQRVVIDLSSPNL 129

Query: 226 AKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS 285
           AKEMHVGHLRSTIIGD ++R+L +LG DV+R NHVGDWGTQFGML+A+L+++ P      
Sbjct: 130 AKEMHVGHLRSTIIGDAVARVLTFLGDDVIRQNHVGDWGTQFGMLLAYLEEQ-P--AAAE 186

Query: 286 PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIY 345
             +ADL+ FY+ +KKRFDE   F  RA + VV LQ  D +  + W+   DVS    Q +Y
Sbjct: 187 SELADLEQFYRAAKKRFDESAEFADRARELVVRLQAGDAECLRLWQRFNDVSLSHCQAVY 246

Query: 346 DRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMT 397
           DRL V+L+    +GES Y   +  +V  L  KGLL  DDG + ++       +   +P+ 
Sbjct: 247 DRLGVSLSPADVKGESAYNAELPGIVEALRAKGLLTEDDGAQCVFLDEFKNAEGNPLPVI 306

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
           + K+ GG+ Y T+DLAA+R R +   AD ++Y  D R
Sbjct: 307 VQKAGGGYLYATTDLAAMRYRSQVLHADRVLYFVDQR 343



 Score =  221 bits (562), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 196/337 (58%), Gaps = 34/337 (10%)

Query: 1127 TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 1186
            T  V +T +K     GDF  N AM L K    K     P ++A+ +       +A  P  
Sbjct: 29   TIQVENTKDK---SHGDFASNIAMMLAKPAGLK-----PRELAEKL-------IAALPQD 73

Query: 1187 AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNI 1242
            A+V  K+E+A PGF+N F +     E+++  + +   P    +K+    RV++D SSPN+
Sbjct: 74   AQV-SKVEIAGPGFLNFFQNTAALAERLEAALAD---PQLAVRKVGAAQRVVIDLSSPNL 129

Query: 1243 AKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS 1302
            AKEMHVGHLRSTIIGD ++R+L +LG DV+R NHVGDWGTQFGML+A+L+++ P      
Sbjct: 130  AKEMHVGHLRSTIIGDAVARVLTFLGDDVIRQNHVGDWGTQFGMLLAYLEEQ-P--AAAE 186

Query: 1303 PPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIY 1362
              +ADL+ FY+ +KKRFDE   F  RA + VV LQ  D +  + W+   DVS    Q +Y
Sbjct: 187  SELADLEQFYRAAKKRFDESAEFADRARELVVRLQAGDAECLRLWQRFNDVSLSHCQAVY 246

Query: 1363 DRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMT 1414
            DRL V+L+    +GES Y   +  +V  L  KGLL  DDG + ++       +   +P+ 
Sbjct: 247  DRLGVSLSPADVKGESAYNAELPGIVEALRAKGLLTEDDGAQCVFLDEFKNAEGNPLPVI 306

Query: 1415 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            + K+ GG+ Y T+DLAA+R R +   AD ++Y  D R
Sbjct: 307  VQKAGGGYLYATTDLAAMRYRSQVLHADRVLYFVDQR 343


>gi|421538458|ref|ZP_15984634.1| arginine--tRNA ligase [Neisseria meningitidis 93003]
 gi|402316485|gb|EJU52030.1| arginine--tRNA ligase [Neisseria meningitidis 93003]
          Length = 572

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 318/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  223 bits (568), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 155/418 (37%), Positives = 216/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLARNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 185/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +    I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLARNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|381400858|ref|ZP_09925777.1| arginyl-tRNA synthetase [Kingella kingae PYKK081]
 gi|380834142|gb|EIC13991.1| arginyl-tRNA synthetase [Kingella kingae PYKK081]
          Length = 568

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/562 (39%), Positives = 323/562 (57%), Gaps = 41/562 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            K GDFQ N  M   K        +NP ++AQ +A     EL    ++A      EVA PG
Sbjct: 34   KHGDFQINGVMGAAK-----KAGQNPRELAQKVAD----ELHGKGAIASA----EVAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+ L+  +  E +    +N  + P       V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 81   FINLRLAADFLAENLNSGSLNIEKTPNPQT---VVIDYSSPNLAKEMHVGHLRSSIIGDS 137

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            ++R+L +LGH+V+R NHVGDWGTQFGML+A+L ++  D       +ADL+ FY+ +K RF
Sbjct: 138  LARVLAFLGHNVIRQNHVGDWGTQFGMLVAYLVEQQQD--NAEFKLADLEQFYRNAKVRF 195

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DED  F   A + VV LQ  D      W+   ++S +  + +Y +L + L      GES 
Sbjct: 196  DEDAAFADLAREYVVKLQGGDAAVLALWQQFVEISLQHAEAVYAKLGLKLQRADVAGESS 255

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   ++ ++  L  KGL    DG K+++      +D       + K  GGF Y T+D A 
Sbjct: 256  YNDDLQNVIDELTAKGLAVESDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDFAC 315

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +R R+ +  A+ ++YV D  Q +HF+ L   ++KAG L P     +F+GFG ++G+D K 
Sbjct: 316  MRYRVGKLGANRLMYVVDTRQDLHFKQLFSASRKAGWL-PENVSAEFIGFGTMMGKDGKP 374

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL +LLDE + R+   +++KN   +L+  E+++  + V  G +KYADLS N
Sbjct: 375  FKTRSGDTVKLVDLLDEAVERATALVREKN--ADLSAEEVAQIGEVVGIGAVKYADLSKN 432

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA YL YAYTR+ S+ + AG    +  V A    + LE   E
Sbjct: 433  RTSDYVFDWDNMLSFEGNTAPYLQYAYTRVQSVFKKAG----EWNVQA---ALKLEQPLE 485

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+  DV+  V      H+L  YLY ++T FS FY+ C  ++  AEG ++    
Sbjct: 486  QQLAVELLKFEDVVASVAETSYPHYLAAYLYQLATLFSRFYEVCPILK--AEGDVR---D 540

Query: 1045 GRLLLAEATAKVMKKCFDILNI 1066
             RL LA+ TA+ M+   D+L I
Sbjct: 541  SRLKLAKLTAETMRTGLDLLGI 562



 Score =  212 bits (540), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/394 (34%), Positives = 206/394 (52%), Gaps = 29/394 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           K GDFQ N  M   K        +NP ++AQ +A     EL    ++A      EVA PG
Sbjct: 34  KHGDFQINGVMGAAK-----KAGQNPRELAQKVAD----ELHGKGAIASA----EVAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+ L+  +  E +    +N  + P       V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 81  FINLRLAADFLAENLNSGSLNIEKTPNPQT---VVIDYSSPNLAKEMHVGHLRSSIIGDS 137

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           ++R+L +LGH+V+R NHVGDWGTQFGML+A+L ++  D       +ADL+ FY+ +K RF
Sbjct: 138 LARVLAFLGHNVIRQNHVGDWGTQFGMLVAYLVEQQQD--NAEFKLADLEQFYRNAKVRF 195

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DED  F   A + VV LQ  D      W+   ++S +  + +Y +L + L      GES 
Sbjct: 196 DEDAAFADLAREYVVKLQGGDAAVLALWQQFVEISLQHAEAVYAKLGLKLQRADVAGESS 255

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   ++ ++  L  KGL    DG K+++      +D       + K  GGF Y T+D A 
Sbjct: 256 YNDDLQNVIDELTAKGLAVESDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDFAC 315

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
           +R R+ +  A+ ++YV D R      Q  +   K   +  + S++  G    M     P 
Sbjct: 316 MRYRVGKLGANRLMYVVDTRQDLHFKQLFSASRKAGWLPENVSAEFIGFGTMMGKDGKPF 375

Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 505
           + R      L D+   AV+ A   + +K A +++
Sbjct: 376 KTRSGDTVKLVDLLDEAVERATALVREKNADLSA 409



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/320 (37%), Positives = 179/320 (55%), Gaps = 26/320 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            K GDFQ N  M   K        +NP ++AQ +A     EL    ++A      EVA PG
Sbjct: 34   KHGDFQINGVMGAAK-----KAGQNPRELAQKVAD----ELHGKGAIASA----EVAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+ L+  +  E +    +N  + P       V++D+SSPN+AKEMHVGHLRS+IIGD+
Sbjct: 81   FINLRLAADFLAENLNSGSLNIEKTPNPQT---VVIDYSSPNLAKEMHVGHLRSSIIGDS 137

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            ++R+L +LGH+V+R NHVGDWGTQFGML+A+L ++  D       +ADL+ FY+ +K RF
Sbjct: 138  LARVLAFLGHNVIRQNHVGDWGTQFGMLVAYLVEQQQD--NAEFKLADLEQFYRNAKVRF 195

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DED  F   A + VV LQ  D      W+   ++S +  + +Y +L + L      GES 
Sbjct: 196  DEDAAFADLAREYVVKLQGGDAAVLALWQQFVEISLQHAEAVYAKLGLKLQRADVAGESS 255

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   ++ ++  L  KGL    DG K+++      +D       + K  GGF Y T+D A 
Sbjct: 256  YNDDLQNVIDELTAKGLAVESDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDFAC 315

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
            +R R+ +  A+ ++YV D R
Sbjct: 316  MRYRVGKLGANRLMYVVDTR 335


>gi|194098399|ref|YP_002001457.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|240014279|ref|ZP_04721192.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240016715|ref|ZP_04723255.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240121842|ref|ZP_04734804.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|254493590|ref|ZP_05106761.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268594648|ref|ZP_06128815.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268601156|ref|ZP_06135323.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268684169|ref|ZP_06151031.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|293399211|ref|ZP_06643376.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|385335550|ref|YP_005889497.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
 gi|238690193|sp|B4RL22.1|SYR_NEIG2 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|193933689|gb|ACF29513.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|226512630|gb|EEH61975.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268548037|gb|EEZ43455.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268585287|gb|EEZ49963.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268624453|gb|EEZ56853.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|291610625|gb|EFF39735.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|317164093|gb|ADV07634.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 572

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/567 (41%), Positives = 316/567 (55%), Gaps = 51/567 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 627
            N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83   NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 628  IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 687
            IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137  IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 745
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195  AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 746  -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 799
             GES Y   ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 255  AGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLA +R RI   KA  ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G
Sbjct: 315  TDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYL-PENAKAEFIGFGTMMG 373

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            +D K FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYA
Sbjct: 374  KDGKPFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYA 431

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L
Sbjct: 432  DLSKNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVL 484

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
                E  LA  LL+  +VL  V      H+L  YLY  +T FS FY+ C  ++  AEG  
Sbjct: 485  TEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEACPILK--AEGAS 542

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +     RL LA+ T   +K+  D+L I
Sbjct: 543  R---NSRLQLAKLTGNTLKQGLDLLGI 566



 Score =  227 bits (578), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 156/422 (36%), Positives = 215/422 (50%), Gaps = 47/422 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 237
           N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83  NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 238 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 297
           IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137 IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 355
           +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195 AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 356 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 409
            GES Y   ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 255 AGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 410 SDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM-- 467
           +DLA +R RI   KA  ++YV DHR      Q      K   +  ++ ++  G    M  
Sbjct: 315 TDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGK 374

Query: 468 -NVPVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQ 518
              P + R      L D+ T AV+ A        PELG D+ A +  T      K+ D  
Sbjct: 375 DGKPFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLS 434

Query: 519 CN 520
            N
Sbjct: 435 KN 436



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/325 (41%), Positives = 182/325 (56%), Gaps = 36/325 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 1254
            N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83   NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 1255 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 1314
            IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137  IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 1372
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195  AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 1373 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 1426
             GES Y   ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 255  AGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 1427 SDLAAIRQRIEEEKADWIVYVTDHR 1451
            +DLA +R RI   KA  ++YV DHR
Sbjct: 315  TDLACLRYRIGRLKAGRLLYVVDHR 339


>gi|385328800|ref|YP_005883103.1| arginyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|385857557|ref|YP_005904069.1| arginyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
 gi|433522223|ref|ZP_20478910.1| arginine--tRNA ligase [Neisseria meningitidis 61103]
 gi|308389652|gb|ADO31972.1| arginyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325208446|gb|ADZ03898.1| arginyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
 gi|389605341|emb|CCA44260.1| arginyl-tRNA synthetase [Neisseria meningitidis alpha522]
 gi|432258601|gb|ELL13883.1| arginine--tRNA ligase [Neisseria meningitidis 61103]
          Length = 572

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/561 (41%), Positives = 316/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K F
Sbjct: 321  RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERAAALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              +YVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    E 
Sbjct: 438  TSNYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDA-------TAPTVLSEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++ ++  +       
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILKAESASR-----NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  D+L I
Sbjct: 546  RLQLAKLTGDTLKQGLDLLGI 566



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 154/416 (37%), Positives = 215/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P +
Sbjct: 321 RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 184/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R+    AD ++YV DHR
Sbjct: 321  RYRVGTLHADRLLYVVDHR 339


>gi|254286807|ref|ZP_04961760.1| arginyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150423098|gb|EDN15046.1| arginyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 599

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 226/570 (39%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FLS  +   Q +    D+ +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 104  FINIFLSEEFLAAQAEAALADVRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 157

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 158  TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 217

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
            ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 218  ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 277

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 278  VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 337

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 338  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVSLEHHAFGMML 396

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D + FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KY
Sbjct: 397  GKDGRPFKTRAGGTVRLADLLDEAQERAKALIESKN--PELSAEEKANIANTVAMAAVKY 454

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + 
Sbjct: 455  ADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQ 509

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  EKE AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E  
Sbjct: 510  ITEEKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE-- 567

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              ++   RL LA  TAK +K+   +L I T
Sbjct: 568  --SIKQSRLKLAALTAKTIKQGLALLGIDT 595



 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/420 (36%), Positives = 225/420 (53%), Gaps = 44/420 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FLS  +   Q +    D+ +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 104 FINIFLSEEFLAAQAEAALADVRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 157

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 158 TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 217

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
           ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 218 ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 277

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 278 VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 337

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMN 468
           T+D+A  + R E   AD ++Y  D R +  ++QA     K   I  + S +       + 
Sbjct: 338 TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLG 397

Query: 469 V---PVRDRMSVRDYLSDVFTHA-------VQVAFPEL-GDKTASVASTNEKYVHKFGDF 517
               P + R      L+D+   A       ++   PEL  ++ A++A+T      K+ D 
Sbjct: 398 KDGRPFKTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADL 457



 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/333 (41%), Positives = 194/333 (58%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FLS  +   Q +    D+ +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 104  FINIFLSEEFLAAQAEAALADVRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 157

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 158  TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 217

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
            ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 218  ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 277

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 278  VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 337

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 338  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|84393465|ref|ZP_00992221.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375893|gb|EAP92784.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 577

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 320/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  +Q    + +     T  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDEAFLAQQADAALADSRLGVTAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ +GL +  DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLSNIVSDLQTQGLAKESDGAQVVFLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRATQLIESKN--PELAEDEKKTIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF ++ ML   GNTA Y+ YAYTR+ASI   AGI+ + L        + +  EKE
Sbjct: 439  RTTDYVFDWENMLAFEGNTAPYMQYAYTRVASIFAKAGISMDSLE-----GDIKITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    TV  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----TVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/414 (35%), Positives = 222/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35  QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  +Q    + +     T  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FLNIFLDEAFLAQQADAALADSRLGVTAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARGYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ +GL +  DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNHMLSNIVSDLQTQGLAKESDGAQVVFLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R EE  AD ++Y  D R +  ++QA     K   +  S S +       +     P 
Sbjct: 322 AKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPF 381

Query: 472 RDRMSVRDYLSDVF-------THAVQVAFPELG-DKTASVASTNEKYVHKFGDF 517
           + R      L+D+        T  ++   PEL  D+  ++A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAEVRATQLIESKNPELAEDEKKTIANTVAMAAVKYADL 435



 Score =  236 bits (603), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  +Q    + +     T  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDEAFLAQQADAALADSRLGVTAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQSGDEYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ +GL +  DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLSNIVSDLQTQGLAKESDGAQVVFLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQ 348


>gi|153828893|ref|ZP_01981560.1| arginyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|148875599|gb|EDL73734.1| arginyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 599

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 325/570 (57%), Gaps = 45/570 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 573  FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+FLS  +   Q +    DI +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 104  FINIFLSEEFLAAQAEAALADIRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 157

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 158  TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 217

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 745
            ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 218  ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 277

Query: 746  --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 798
              GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 278  VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 337

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A  + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++L
Sbjct: 338  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWIIVRKAGYI-PENVSLEHHAFGMML 396

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D + FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KY
Sbjct: 397  GKDGRPFKTRAGGTVRLADLLDEAEERAKALIESKN--PELSAEEKANIANTVAMAAVKY 454

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS +R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + 
Sbjct: 455  ADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQ 509

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            +  EKE AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E  
Sbjct: 510  ITEEKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE-- 567

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
              ++   RL LA  TAK +K+   +L I T
Sbjct: 568  --SIKQSRLKLAALTAKTIKQGLALLGIDT 595



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/334 (41%), Positives = 195/334 (58%), Gaps = 33/334 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 183 FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+FLS  +   Q +    DI +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 104 FINIFLSEEFLAAQAEAALADIRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 157

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 158 TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 217

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 355
           ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 218 ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 277

Query: 356 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 408
             GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 278 VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 337

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A  + R E   AD ++Y  D R +  ++QA
Sbjct: 338 TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQA 371



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/333 (41%), Positives = 194/333 (58%), Gaps = 33/333 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 57   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLDGIASKTEIAGPG 103

Query: 1200 FVNVFLSRVYAGEQIK----DIIVNGVQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+FLS  +   Q +    DI +   Q  P T      ++ D+S+PN+AKEMHVGHLRS
Sbjct: 104  FINIFLSEEFLAAQAEAALADIRLGVAQEAPKT------IVADYSAPNVAKEMHVGHLRS 157

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            TIIGD + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+
Sbjct: 158  TIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYR 217

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER- 1372
            ESKK +DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT   
Sbjct: 218  ESKKLYDEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTREN 277

Query: 1373 --GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYD 1425
              GES Y   + Q+V  L+ KGL   DDG ++++ E   ++   PM ++  K DGGF Y 
Sbjct: 278  VMGESMYNDMLPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYT 337

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            T+D+A  + R E   AD ++Y  D R +  ++Q
Sbjct: 338  TTDIACAKYRYETLGADRVLYFIDSRQHQHLMQ 370


>gi|416187038|ref|ZP_11614094.1| arginyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325136599|gb|EGC59200.1| arginyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 572

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/561 (41%), Positives = 316/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDMAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K F
Sbjct: 321  RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERAAALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              +YVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    E 
Sbjct: 438  TSNYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVLSEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++ ++  +       
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILKAESASR-----NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  D+L I
Sbjct: 546  RLQLAKLTGDTLKQGLDLLGI 566



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/416 (37%), Positives = 215/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDMAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P +
Sbjct: 321 RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  218 bits (556), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 184/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDMAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R+    AD ++YV DHR
Sbjct: 321  RYRVGTLHADRLLYVVDHR 339


>gi|455739159|ref|YP_007505425.1| Arginyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
 gi|455420722|gb|AGG31052.1| Arginyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
          Length = 576

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/605 (37%), Positives = 338/605 (55%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LSD     +Q A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSD----KIQQALISAGAPLDCDAIVKQSAKAQFGDYQANGVMAAAKKMG---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P  +A+ +  ++         L  + +K E+A PGF+N+FLS  +   Q++  + + 
Sbjct: 53   -MPPRQLAEKVIELL--------DLDGIAEKTEIAGPGFINIFLSPDWLTTQLETALADD 103

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                T  + + + +D+S+PN+AK+MHVGHLRSTIIGD  +R  EYLGH V+R NHVGDWG
Sbjct: 104  KLGLTPVEPMTIAIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEYLGHKVIRCNHVGDWG 163

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE+F +RA   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNEDAGDMALADLEAFYREAKKHYDEDEVFAERARGYVVKLQGGDE 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 771
              +  W  + D++ +  Q+ Y+RLNVTLTE    GES Y   +  +V  L  + + E  +
Sbjct: 223  YCRTMWRKLVDITMQQNQETYNRLNVTLTEDDVMGESLYNDMLPGIVSDLLNRRIAEESE 282

Query: 772  GRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
            G  +++        GE  G I   I K DGG+ Y T+D+A  + R +   AD ++Y  D 
Sbjct: 283  GAIVVYLDEFKNKEGEPMGVI---IRKKDGGYLYTTTDIACAKYRHDVLHADRVLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H        +KAG + P    ++   FG++LG+D K FKTR+G T++LS+LLDE +
Sbjct: 340  RQHQHLMQAWTIVRKAGYI-PESMTLEHHMFGMMLGKDGKPFKTRAGGTIRLSDLLDEAV 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +++KN  +++   EL +  + V  G +KYADLS +R  DY+F +D ML   GNT
Sbjct: 399  ERAEKLIREKN--SDMPEDELKQLAEVVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+AS+ + A I+++ L     + P+ L  + E  LA  LL+  + +  V R
Sbjct: 457  APYMQYAYTRVASVFKRADIDADSL-----TQPIILTDDHERQLAARLLQFEETITAVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            +   H +C YLYD++  FS FY++C  +  ++E     +   RL LA  T K +K   D 
Sbjct: 512  EGLPHMMCSYLYDLAGLFSGFYEHCPILAAESE----ELRQSRLKLALLTQKTLKAGLDT 567

Query: 1064 LNIRT 1068
            L I T
Sbjct: 568  LGIGT 572



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 221/422 (52%), Gaps = 35/422 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LSD     +Q A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1   MNIQAILSD----KIQQALISAGAPLDCDAIVKQSAKAQFGDYQANGVMAAAKKMG---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P  +A+ +  ++         L  + +K E+A PGF+N+FLS  +   Q++  + + 
Sbjct: 53  -MPPRQLAEKVIELL--------DLDGIAEKTEIAGPGFINIFLSPDWLTTQLETALADD 103

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
               T  + + + +D+S+PN+AK+MHVGHLRSTIIGD  +R  EYLGH V+R NHVGDWG
Sbjct: 104 KLGLTPVEPMTIAIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEYLGHKVIRCNHVGDWG 163

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE+F +RA   VV LQ  D 
Sbjct: 164 TQFGMLIAYLE-KMQNEDAGDMALADLEAFYREAKKHYDEDEVFAERARGYVVKLQGGDE 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 381
             +  W  + D++ +  Q+ Y+RLNVTLTE    GES Y   +  +V  L  + + E  +
Sbjct: 223 YCRTMWRKLVDITMQQNQETYNRLNVTLTEDDVMGESLYNDMLPGIVSDLLNRRIAEESE 282

Query: 382 GRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           G  +++        GE  G I   I K DGG+ Y T+D+A  + R +   AD ++Y  D 
Sbjct: 283 GAIVVYLDEFKNKEGEPMGVI---IRKKDGGYLYTTTDIACAKYRHDVLHADRVLYYIDS 339

Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
           R +  ++QA     K   I  S + +       +     P + R      LSD+   AV+
Sbjct: 340 RQHQHLMQAWTIVRKAGYIPESMTLEHHMFGMMLGKDGKPFKTRAGGTIRLSDLLDEAVE 399

Query: 491 VA 492
            A
Sbjct: 400 RA 401



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/368 (36%), Positives = 203/368 (55%), Gaps = 32/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LSD     +Q A    G      A   +    +FGD+Q N  MA  K       
Sbjct: 1    MNIQAILSD----KIQQALISAGAPLDCDAIVKQSAKAQFGDYQANGVMAAAKKMG---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P  +A+ +  ++         L  + +K E+A PGF+N+FLS  +   Q++  + + 
Sbjct: 53   -MPPRQLAEKVIELL--------DLDGIAEKTEIAGPGFINIFLSPDWLTTQLETALADD 103

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                T  + + + +D+S+PN+AK+MHVGHLRSTIIGD  +R  EYLGH V+R NHVGDWG
Sbjct: 104  KLGLTPVEPMTIAIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEYLGHKVIRCNHVGDWG 163

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGMLIA+L+ K  +       +ADL+AFY+E+KK +DEDE+F +RA   VV LQ  D 
Sbjct: 164  TQFGMLIAYLE-KMQNEDAGDMALADLEAFYREAKKHYDEDEVFAERARGYVVKLQGGDE 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDD 1398
              +  W  + D++ +  Q+ Y+RLNVTLTE    GES Y   +  +V  L  + + E  +
Sbjct: 223  YCRTMWRKLVDITMQQNQETYNRLNVTLTEDDVMGESLYNDMLPGIVSDLLNRRIAEESE 282

Query: 1399 GRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            G  +++        GE  G I   I K DGG+ Y T+D+A  + R +   AD ++Y  D 
Sbjct: 283  GAIVVYLDEFKNKEGEPMGVI---IRKKDGGYLYTTTDIACAKYRHDVLHADRVLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R +  ++Q
Sbjct: 340  RQHQHLMQ 347


>gi|258626716|ref|ZP_05721540.1| Arginyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258581012|gb|EEW05937.1| Arginyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 597

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 323/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGQISMELSDLEAFYRESKKLY 221

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PEQVSLEHHAFGMMLGKDGRP 400

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   +K KN   +L+  E ++    VA   +KYADLS +
Sbjct: 401  FKTRAGGTVRLADLLDEAEERAKALIKSKN--PDLSADEKAKIANTVAMAAVKYADLSKH 458

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 459  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 513

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 514  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----NVKQ 569

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 570  SRLKLAALTAKTIKQGLALLGIET 593



 Score =  236 bits (603), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 192/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102 FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 162 VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGQISMELSDLEAFYRESKKLY 221

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282 YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 342 AKYRYETLGADRVLYFIDSRQHQHLMQA 369



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 191/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGQISMELSDLEAFYRESKKLY 221

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQ 368


>gi|218768489|ref|YP_002343001.1| arginyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|433480083|ref|ZP_20437370.1| arginine--tRNA ligase [Neisseria meningitidis 63041]
 gi|433519206|ref|ZP_20475929.1| arginine--tRNA ligase [Neisseria meningitidis 65014]
 gi|433541351|ref|ZP_20497799.1| arginine--tRNA ligase [Neisseria meningitidis 63006]
 gi|23822208|sp|Q9JTM7.1|SYR_NEIMA RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|121052497|emb|CAM08836.1| arginyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|432215043|gb|ELK70934.1| arginine--tRNA ligase [Neisseria meningitidis 63041]
 gi|432256134|gb|ELL11458.1| arginine--tRNA ligase [Neisseria meningitidis 65014]
 gi|432276892|gb|ELL31946.1| arginine--tRNA ligase [Neisseria meningitidis 63006]
          Length = 572

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/561 (41%), Positives = 316/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K F
Sbjct: 321  RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERAAALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              +YVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    E 
Sbjct: 438  TSNYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVLSEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++ ++  +       
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILKAESASR-----NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  D+L I
Sbjct: 546  RLQLAKLTGDTLKQGLDLLGI 566



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/416 (37%), Positives = 215/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P +
Sbjct: 321 RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  218 bits (556), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 184/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R+    AD ++YV DHR
Sbjct: 321  RYRVGTLHADRLLYVVDHR 339


>gi|59801352|ref|YP_208064.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|75355970|sp|Q5F835.1|SYR_NEIG1 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|59718247|gb|AAW89652.1| putative arginyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 572

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/567 (41%), Positives = 316/567 (55%), Gaps = 51/567 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 627
            N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83   NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 628  IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 687
            IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137  IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 745
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195  AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 746  -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 799
             GES Y   ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 255  AGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLA +R RI   KA  ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G
Sbjct: 315  TDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYL-PEDAKAEFIGFGTMMG 373

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            +D K FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYA
Sbjct: 374  KDGKPFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYA 431

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L
Sbjct: 432  DLSKNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVL 484

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
                E  LA  LL+  +VL  V      H+L  YLY  +T FS FY+ C  ++  AEG  
Sbjct: 485  TEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEACPILK--AEGAS 542

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +     RL LA+ T   +K+  D+L I
Sbjct: 543  R---NSRLQLAKLTGNTLKQGLDLLGI 566



 Score =  226 bits (576), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 156/422 (36%), Positives = 214/422 (50%), Gaps = 47/422 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 237
           N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83  NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 238 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 297
           IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137 IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 355
           +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195 AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 356 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 409
            GES Y   ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 255 AGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 410 SDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM-- 467
           +DLA +R RI   KA  ++YV DHR      Q      K   +   + ++  G    M  
Sbjct: 315 TDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGK 374

Query: 468 -NVPVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQ 518
              P + R      L D+ T AV+ A        PELG D+ A +  T      K+ D  
Sbjct: 375 DGKPFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLS 434

Query: 519 CN 520
            N
Sbjct: 435 KN 436



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/325 (41%), Positives = 182/325 (56%), Gaps = 36/325 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 1254
            N+ L   +  + I          +    QP T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83   NLRLRHEFLAQNIHAALNDARFGVAKTAQPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 1255 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 1314
            IIGD+ISR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137  IIGDSISRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 1372
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195  AKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 1373 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 1426
             GES Y   ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y +
Sbjct: 255  AGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 1427 SDLAAIRQRIEEEKADWIVYVTDHR 1451
            +DLA +R RI   KA  ++YV DHR
Sbjct: 315  TDLACLRYRIGRLKAGRLLYVVDHR 339


>gi|343513291|ref|ZP_08750400.1| arginyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
 gi|342793596|gb|EGU29388.1| arginyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
          Length = 577

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/565 (38%), Positives = 323/565 (57%), Gaps = 35/565 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +     T  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALNDARLGVTAEEAKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAAKARAYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESK 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL    +G ++++      +D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLQAQGLAVESEGAQVVFLDEYKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEQLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN    L   E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAAQLIESKN--PTLAAEEKATIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVSMDELQ-----GDIIITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNC-YCIEKDAEGKIKTVH 1043
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C   + +DA      V 
Sbjct: 494  KALVAKLLQFEEAVQSVAREGQPHIMCAYLFELAGQFSSFYEACPILVAEDA-----AVK 548

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL +A  TAK +K+   +L I T
Sbjct: 549  QSRLKMAALTAKTIKQGLSLLGIDT 573



 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 194/328 (59%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +     T  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALNDARLGVTAEEAKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAAKARAYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESK 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL    +G ++++      +D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLQAQGLAVESEGAQVVFLDEYKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E+  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEQLGADRVLYFIDSRQHQHLMQA 349



 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 193/327 (59%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +     T  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALNDARLGVTAEEAKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAAKARAYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESK 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL    +G ++++      +D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLQAQGLAVESEGAQVVFLDEYKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E+  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEQLGADRVLYFIDSRQHQHLMQ 348


>gi|416160709|ref|ZP_11606216.1| arginyl-tRNA synthetase [Neisseria meningitidis N1568]
 gi|433473887|ref|ZP_20431246.1| arginine--tRNA ligase [Neisseria meningitidis 97021]
 gi|433482397|ref|ZP_20439655.1| arginine--tRNA ligase [Neisseria meningitidis 2006087]
 gi|433484910|ref|ZP_20442124.1| arginine--tRNA ligase [Neisseria meningitidis 2002038]
 gi|433486705|ref|ZP_20443897.1| arginine--tRNA ligase [Neisseria meningitidis 97014]
 gi|325128541|gb|EGC51414.1| arginyl-tRNA synthetase [Neisseria meningitidis N1568]
 gi|432208816|gb|ELK64788.1| arginine--tRNA ligase [Neisseria meningitidis 97021]
 gi|432215117|gb|ELK71007.1| arginine--tRNA ligase [Neisseria meningitidis 2006087]
 gi|432219147|gb|ELK74995.1| arginine--tRNA ligase [Neisseria meningitidis 2002038]
 gi|432221224|gb|ELK77037.1| arginine--tRNA ligase [Neisseria meningitidis 97014]
          Length = 572

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/561 (41%), Positives = 317/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            G+FQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GNFQINGVMGTAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K F
Sbjct: 321  RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PESVGAAFVGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +     
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  D+L I
Sbjct: 546  RLQLAKLTGDTLKQGLDLLGI 566



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 153/416 (36%), Positives = 215/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           G+FQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GNFQINGVMGTAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R R+    AD ++YV DHR      Q      K   +  S  +   G    M     P +
Sbjct: 321 RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPESVGAAFVGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  216 bits (549), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 184/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            G+FQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GNFQINGVMGTAK-----KAKQNPRELAQKVAEA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I+  + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R+    AD ++YV DHR
Sbjct: 321  RYRVGTLHADRLLYVVDHR 339


>gi|268597025|ref|ZP_06131192.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268603476|ref|ZP_06137643.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268681956|ref|ZP_06148818.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268686424|ref|ZP_06153286.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268550813|gb|EEZ45832.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268587607|gb|EEZ52283.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622240|gb|EEZ54640.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268626708|gb|EEZ59108.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 572

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/561 (41%), Positives = 316/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRHEFLAQNIHAALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R RI   KA  ++YV D  Q +HF  L   ++KAG L P   + +F+GFG ++G+D K F
Sbjct: 321  RYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYL-PENAKAEFIGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R AG           + P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWD-------ATAPTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  +VL  V      H+L  YLY  +T FS FY+ C  ++  AEG  +     
Sbjct: 491  QLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEACPILK--AEGASR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  D+L I
Sbjct: 546  RLQLAKLTGNTLKQGLDLLGI 566



 Score =  226 bits (576), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 154/416 (37%), Positives = 215/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRHEFLAQNIHAALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R RI   KA  ++YV DHR      Q      K   +  ++ ++  G    M     P +
Sbjct: 321 RYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 182/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGNA----VIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRHEFLAQNIHAALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+LE+ G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +   L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R RI   KA  ++YV DHR
Sbjct: 321  RYRIGRLKAGRLLYVVDHR 339


>gi|262404425|ref|ZP_06080980.1| arginyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349457|gb|EEY98595.1| arginyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 597

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 322/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 221

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PEQVSLEHHAFGMMLGKDGRP 400

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADLS +
Sbjct: 401  FKTRAGGTVRLADLLDEAEERAKALIESKN--PELSTEEKANIANTVAMAAVKYADLSKH 458

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++   L     +  + +  EKE
Sbjct: 459  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMTQL-----TGHIQITEEKE 513

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 514  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SVKQ 569

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 570  SRLKLAALTAKTIKQGLALLGIET 593



 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 192/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102 FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 162 VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 221

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282 YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 342 AKYRYETLGADRVLYFIDSRQHQHLMQA 369



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 191/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 221

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQ 368


>gi|443471192|ref|ZP_21061265.1| Arginyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
 gi|442901095|gb|ELS27094.1| Arginyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
          Length = 579

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/605 (38%), Positives = 335/605 (55%), Gaps = 45/605 (7%)

Query: 476  SVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T   Q    PE       V +T +K     GDF  N AM L K    K  
Sbjct: 4    TIRQLIQQALTRLTQEGVLPEGLSPAIQVENTKDK---SHGDFASNIAMMLAKPAGLK-- 58

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P D+A+ + + +  +          + K+E+A PGF+N F +     ++++  + + 
Sbjct: 59   ---PRDLAEKLINALPQD--------DQVAKVEIAGPGFLNFFQNSHALAQRLESALADD 107

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV+      +  V+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVG
Sbjct: 108  RLGVRKN--GPQQCVVVDLSAPNLAKEMHVGHLRSTIIGDAVARVLEFLGDRVIRQNHVG 165

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGML+A++Q++ P  +     +ADL+ FY+ +KKRFDE   F  RA + VV LQ 
Sbjct: 166  DWGTQFGMLLAYMQEQ-P--VGSDAELADLEGFYRAAKKRFDESGEFADRARELVVKLQA 222

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             DP+    W    D+S    Q +YDRL V LT    +GES Y   + Q+V  L  KGLL 
Sbjct: 223  GDPECLSLWTRFNDISLSHCQAVYDRLGVKLTMADVKGESAYNDDLPQVVEDLRAKGLLT 282

Query: 769  LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              DG   ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD  +Y  D 
Sbjct: 283  ESDGALCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRSGVLKADRALYFVDQ 342

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q +HF+++   A+ AG + P+   M+ +GFG + G D + FKTR G TVKL +LLDE  
Sbjct: 343  RQALHFQMVFAAARLAGFVRPD-FEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAE 401

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
            +R+ + +K KN   +L   EL +  +AV    +KYADLS +R  DY F+FD ML   GNT
Sbjct: 402  QRAFELVKGKN--PDLDDAELRQIARAVGISAVKYADLSKHRTSDYSFNFDLMLSFEGNT 459

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A YLLYAYTR+AS+ R  G +  ++        + L  E+E ALA  L +  D L  V  
Sbjct: 460  APYLLYAYTRVASVFRKLGKDFSEV-----DGRIELVAEQEQALAAKLAQFADTLGNVAE 514

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
                H LC YLYD++  FS FY+NC  +  + E   K+    RL LA  T + +K+  ++
Sbjct: 515  KGVPHILCAYLYDLAGLFSSFYENCPILAAEDEATQKS----RLRLAALTGRTLKQGLEL 570

Query: 1064 LNIRT 1068
            L + T
Sbjct: 571  LGLHT 575



 Score =  219 bits (558), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/361 (37%), Positives = 196/361 (54%), Gaps = 33/361 (9%)

Query: 86  SVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T   Q    PE       V +T +K     GDF  N AM L K    K  
Sbjct: 4   TIRQLIQQALTRLTQEGVLPEGLSPAIQVENTKDK---SHGDFASNIAMMLAKPAGLK-- 58

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P D+A+ + + +  +          + K+E+A PGF+N F +     ++++  + + 
Sbjct: 59  ---PRDLAEKLINALPQD--------DQVAKVEIAGPGFLNFFQNSHALAQRLESALADD 107

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GV+      +  V+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVG
Sbjct: 108 RLGVRKN--GPQQCVVVDLSAPNLAKEMHVGHLRSTIIGDAVARVLEFLGDRVIRQNHVG 165

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGML+A++Q++ P  +     +ADL+ FY+ +KKRFDE   F  RA + VV LQ 
Sbjct: 166 DWGTQFGMLLAYMQEQ-P--VGSDAELADLEGFYRAAKKRFDESGEFADRARELVVKLQA 222

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            DP+    W    D+S    Q +YDRL V LT    +GES Y   + Q+V  L  KGLL 
Sbjct: 223 GDPECLSLWTRFNDISLSHCQAVYDRLGVKLTMADVKGESAYNDDLPQVVEDLRAKGLLT 282

Query: 379 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             DG   ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD  +Y  D 
Sbjct: 283 ESDGALCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRSGVLKADRALYFVDQ 342

Query: 434 R 434
           R
Sbjct: 343 R 343



 Score =  219 bits (558), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/361 (37%), Positives = 196/361 (54%), Gaps = 33/361 (9%)

Query: 1103 SVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T   Q    PE       V +T +K     GDF  N AM L K    K  
Sbjct: 4    TIRQLIQQALTRLTQEGVLPEGLSPAIQVENTKDK---SHGDFASNIAMMLAKPAGLK-- 58

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P D+A+ + + +  +          + K+E+A PGF+N F +     ++++  + + 
Sbjct: 59   ---PRDLAEKLINALPQD--------DQVAKVEIAGPGFLNFFQNSHALAQRLESALADD 107

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV+      +  V+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVG
Sbjct: 108  RLGVRKN--GPQQCVVVDLSAPNLAKEMHVGHLRSTIIGDAVARVLEFLGDRVIRQNHVG 165

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGML+A++Q++ P  +     +ADL+ FY+ +KKRFDE   F  RA + VV LQ 
Sbjct: 166  DWGTQFGMLLAYMQEQ-P--VGSDAELADLEGFYRAAKKRFDESGEFADRARELVVKLQA 222

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             DP+    W    D+S    Q +YDRL V LT    +GES Y   + Q+V  L  KGLL 
Sbjct: 223  GDPECLSLWTRFNDISLSHCQAVYDRLGVKLTMADVKGESAYNDDLPQVVEDLRAKGLLT 282

Query: 1396 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              DG   ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD  +Y  D 
Sbjct: 283  ESDGALCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRSGVLKADRALYFVDQ 342

Query: 1451 R 1451
            R
Sbjct: 343  R 343


>gi|413949932|gb|AFW82581.1| hypothetical protein ZEAMMB73_640075, partial [Zea mays]
          Length = 512

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/456 (45%), Positives = 285/456 (62%), Gaps = 30/456 (6%)

Query: 476 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
           SV+  LS +   ++Q   P++  +     S       KF D+QCN+AM L    K  G  
Sbjct: 72  SVKQQLSRLVLSSLQTTLPDVEVEPMVEVSA------KFADYQCNNAMGLWSKVKGSGTI 125

Query: 536 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            KNP  I Q+IA  + S        + +I+   VA PGFVN+ LS  +  ++I+D++VNG
Sbjct: 126 FKNPNSIGQAIAKNLPS--------SDIIESASVAGPGFVNITLSNRWVAQRIQDMLVNG 177

Query: 595 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
           ++   P L    R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+    V+R NHVGD
Sbjct: 178 IKTWAPVLPVN-RTVVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVVVLRRNHVGD 236

Query: 653 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
           WGTQFGMLI +L +KFP++       I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 237 WGTQFGMLIEYLFEKFPNWQEIGCQAIGDLQIFYKASKHRFDSDPDFKARAQQGVVRLQG 296

Query: 712 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
            +  Y++AW+ ICD+SR +F  +Y RLNV L E+GESFY  ++ Q++  L  KGL++  +
Sbjct: 297 GEDKYREAWKKICDISRSEFDLVYKRLNVVLEEKGESFYNPYIPQVLEELSNKGLIKESE 356

Query: 772 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRL 831
           G ++++ +    IP+ +VKSDGGF Y ++DL A+  R+  E+A+WI+YVTD+GQ  HF +
Sbjct: 357 GARVIFIQGH-QIPLIVVKSDGGFNYASTDLTALWYRLNVEQAEWIIYVTDVGQQQHFDM 415

Query: 832 LEECAKKAGILNPNKTRMDF-----VGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
           +   AK AG L P+ +   F     VGFG+VLG D K+F+TRS + V+L ELLDE   RS
Sbjct: 416 VFSAAKMAGWL-PDPSEKKFPKTSHVGFGLVLGSDGKRFRTRSTEVVRLVELLDEAKSRS 474

Query: 887 ----LDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
               L +L +  +  + T  EL +  +AV YG +KY
Sbjct: 475 KSELLQRLTENGKIVDWTDEELEQTSEAVGYGAVKY 510



 Score =  305 bits (781), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 162/351 (46%), Positives = 224/351 (63%), Gaps = 20/351 (5%)

Query: 86  SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
           SV+  LS +   ++Q   P++  +     S       KF D+QCN+AM L    K  G  
Sbjct: 72  SVKQQLSRLVLSSLQTTLPDVEVEPMVEVSA------KFADYQCNNAMGLWSKVKGSGTI 125

Query: 146 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
            KNP  I Q+IA  + S        + +I+   VA PGFVN+ LS  +  ++I+D++VNG
Sbjct: 126 FKNPNSIGQAIAKNLPS--------SDIIESASVAGPGFVNITLSNRWVAQRIQDMLVNG 177

Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
           ++   P L    R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+    V+R NHVGD
Sbjct: 178 IKTWAPVLPVN-RTVVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVVVLRRNHVGD 236

Query: 263 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           WGTQFGMLI +L +KFP++       I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 237 WGTQFGMLIEYLFEKFPNWQEIGCQAIGDLQIFYKASKHRFDSDPDFKARAQQGVVRLQG 296

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
            +  Y++AW+ ICD+SR +F  +Y RLNV L E+GESFY  ++ Q++  L  KGL++  +
Sbjct: 297 GEDKYREAWKKICDISRSEFDLVYKRLNVVLEEKGESFYNPYIPQVLEELSNKGLIKESE 356

Query: 382 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
           G ++++ +    IP+ +VKSDGGF Y ++DL A+  R+  E+A+WI+YVTD
Sbjct: 357 GARVIFIQGH-QIPLIVVKSDGGFNYASTDLTALWYRLNVEQAEWIIYVTD 406



 Score =  305 bits (781), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 162/351 (46%), Positives = 224/351 (63%), Gaps = 20/351 (5%)

Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
            SV+  LS +   ++Q   P++  +     S       KF D+QCN+AM L    K  G  
Sbjct: 72   SVKQQLSRLVLSSLQTTLPDVEVEPMVEVSA------KFADYQCNNAMGLWSKVKGSGTI 125

Query: 1163 -KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
             KNP  I Q+IA  + S        + +I+   VA PGFVN+ LS  +  ++I+D++VNG
Sbjct: 126  FKNPNSIGQAIAKNLPS--------SDIIESASVAGPGFVNITLSNRWVAQRIQDMLVNG 177

Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
            ++   P L    R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+ E+    V+R NHVGD
Sbjct: 178  IKTWAPVLPVN-RTVVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVVVLRRNHVGD 236

Query: 1280 WGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            WGTQFGMLI +L +KFP++       I DLQ FYK SK RFD D  FK RA Q VV LQ 
Sbjct: 237  WGTQFGMLIEYLFEKFPNWQEIGCQAIGDLQIFYKASKHRFDSDPDFKARAQQGVVRLQG 296

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
             +  Y++AW+ ICD+SR +F  +Y RLNV L E+GESFY  ++ Q++  L  KGL++  +
Sbjct: 297  GEDKYREAWKKICDISRSEFDLVYKRLNVVLEEKGESFYNPYIPQVLEELSNKGLIKESE 356

Query: 1399 GRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
            G ++++ +    IP+ +VKSDGGF Y ++DL A+  R+  E+A+WI+YVTD
Sbjct: 357  GARVIFIQGH-QIPLIVVKSDGGFNYASTDLTALWYRLNVEQAEWIIYVTD 406


>gi|197334256|ref|YP_002155601.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690276|sp|B5FC42.1|SYR_VIBFM RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|197315746|gb|ACH65193.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 577

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/564 (37%), Positives = 324/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADKRLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F   A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVTARGYVVKLQSGDEFCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+K+GL    +G ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNSMLAPIVADLQKQGLAVESEGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   +++KN+  +L   E ++    VA   +KY+DLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAAKLIEEKNK--DLPAEEKAKIATTVAMAAVKYSDLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L     +  V +  EKE
Sbjct: 439  RTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFSKAGLSMDEL-----TGEVKITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   L++  + +  V  +   H +C YL++++  FS FY+ C  +  + +     V  
Sbjct: 494  KALVAKLMQFEEAVQAVASEGQPHLMCAYLFELAGQFSSFYEACPILNNEDD----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  ++L I T
Sbjct: 550  SRLKLAALTAKTIKQGLELLGIET 573



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 130/328 (39%), Positives = 192/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALADKRLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F   A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVTARGYVVKLQSGDEFCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+K+GL    +G ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNSMLAPIVADLQKQGLAVESEGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R EE  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEELNADRVLYFIDSRQHQHLMQA 349



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 191/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKRLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +        ++  ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALADKRLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHNVTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F   A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVTARGYVVKLQSGDEFCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDNVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+K+GL    +G ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNSMLAPIVADLQKQGLAVESEGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEELNADRVLYFIDSRQHQHLMQ 348


>gi|343503720|ref|ZP_08741528.1| arginyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
 gi|342814108|gb|EGU49059.1| arginyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
          Length = 577

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/564 (38%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +  +Q +  + +     T      ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALTDARLGVTAEAAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAAKARAYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESK 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   + ++V  L+ +GL    +G ++++      +D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLQAQGLAVESEGAQVVFLDEYKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E+  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + 
Sbjct: 322  AKYRYEQLGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN    L   E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAAQLIESKN--PTLDAEEKATIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   AG++ ++L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAGVSMDELQ-----GDILITDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E     V  
Sbjct: 494  KALVAKLLQFEEAVQSVAREGQPHIMCAYLFELAGQFSSFYEACPILVAEDE----AVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL +A  TAK +K+   +L I T
Sbjct: 550  SRLKMAALTAKTIKQGLSLLGIDT 573



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +  +Q +  + +     T      ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAKQAEAALTDARLGVTAEAAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAAKARAYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESK 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   + ++V  L+ +GL    +G ++++      +D  ++ + + K DGGF Y T+D+A 
Sbjct: 262 YNDMLPKIVADLQAQGLAVESEGAQVVFLDEYKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E+  AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYEQLGADRVLYFIDSRQHQHLMQA 349



 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+         L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKQLG-----TNPREFAQKVLDVL--------DLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +  +Q +  + +     T      ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAKQAEAALTDARLGVTAEAAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAAKARAYVVKLQGGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESK 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   + ++V  L+ +GL    +G ++++      +D  ++ + + K DGGF Y T+D+A 
Sbjct: 262  YNDMLPKIVADLQAQGLAVESEGAQVVFLDEYKNKDGEAMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E+  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYEQLGADRVLYFIDSRQHQHLMQ 348


>gi|433497190|ref|ZP_20454224.1| arginine--tRNA ligase [Neisseria meningitidis M7089]
 gi|433499257|ref|ZP_20456264.1| arginine--tRNA ligase [Neisseria meningitidis M7124]
 gi|433501222|ref|ZP_20458206.1| arginine--tRNA ligase [Neisseria meningitidis NM174]
 gi|432232903|gb|ELK88538.1| arginine--tRNA ligase [Neisseria meningitidis M7089]
 gi|432233684|gb|ELK89310.1| arginine--tRNA ligase [Neisseria meningitidis M7124]
 gi|432235028|gb|ELK90647.1| arginine--tRNA ligase [Neisseria meningitidis NM174]
          Length = 572

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/567 (42%), Positives = 321/567 (56%), Gaps = 51/567 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 575  NV-----FLSR-VYAG-EQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 627
            N+     FL+R +YA     +  I    +P T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83   NLRLRPEFLARNIYAALNDARFGIAKTDKPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 628  IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 687
            IIGD+ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137  IIGDSISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 688  SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 745
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195  AKVRFDEDPTFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 746  -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 799
             GES Y   ++ +V  L +KGL   DDG K+++ E+     G     IV K  GGF Y +
Sbjct: 255  AGESKYNDDLQAVVDDLVQKGLAVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLA +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G
Sbjct: 315  TDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMG 373

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            +D K FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYA
Sbjct: 374  KDGKPFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGVDEAAKIGKTVGIGAVKYA 431

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  DYVF ++ ML   GNTA YL YAYTR+ S+ R AG    D  V     P  L
Sbjct: 432  DLSKNRTSDYVFDWNAMLSFEGNTAPYLQYAYTRVQSVFRKAG--EWDATV-----PTVL 484

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
                E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  +EG  
Sbjct: 485  TEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--SEGAT 542

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
            +     RL LA+ T   +K+  D+L I
Sbjct: 543  R---NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  226 bits (576), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 185 NV-----FLSR-VYAG-EQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 237
           N+     FL+R +YA     +  I    +P T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83  NLRLRPEFLARNIYAALNDARFGIAKTDKPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 238 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 297
           IIGD+ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137 IIGDSISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 355
           +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195 AKVRFDEDPTFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 356 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 409
            GES Y   ++ +V  L +KGL   DDG K+++ E+     G     IV K  GGF Y +
Sbjct: 255 AGESKYNDDLQAVVDDLVQKGLAVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 410 SDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM-- 467
           +DLA +R R+    AD ++YV DHR      Q      K   +  +  +   G    M  
Sbjct: 315 TDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGK 374

Query: 468 -NVPVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQ 518
              P + R      L D+ T AV+ A        PELG D+ A +  T      K+ D  
Sbjct: 375 DGKPFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGVDEAAKIGKTVGIGAVKYADLS 434

Query: 519 CN 520
            N
Sbjct: 435 KN 436



 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/325 (42%), Positives = 187/325 (57%), Gaps = 36/325 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVAEA----LADN----AVIESAEVAGPGFI 82

Query: 1202 NV-----FLSR-VYAG-EQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRST 1254
            N+     FL+R +YA     +  I    +P T      V++D+SSPN+AKEMHVGHLRS+
Sbjct: 83   NLRLRPEFLARNIYAALNDARFGIAKTDKPQT------VVIDYSSPNLAKEMHVGHLRSS 136

Query: 1255 IIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKE 1314
            IIGD+ISR+L ++G+ VVR NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ 
Sbjct: 137  IIGDSISRVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRA 194

Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER-- 1372
            +K RFDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L     
Sbjct: 195  AKVRFDEDPTFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDV 254

Query: 1373 -GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDT 1426
             GES Y   ++ +V  L +KGL   DDG K+++ E+     G     IV K  GGF Y +
Sbjct: 255  AGESKYNDDLQAVVDDLVQKGLAVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYAS 314

Query: 1427 SDLAAIRQRIEEEKADWIVYVTDHR 1451
            +DLA +R R+    AD ++YV DHR
Sbjct: 315  TDLACLRYRVGTLHADRLLYVVDHR 339


>gi|90408772|ref|ZP_01216917.1| arginyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310116|gb|EAS38256.1| arginyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 582

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/563 (39%), Positives = 327/563 (58%), Gaps = 34/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N A+ L K       K+NP    +++A ++   L T    + +I K E+A PGF+
Sbjct: 41   GDFASNLALMLAK-----PAKQNP----RALAELIVKNLPT----SDIIIKTEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N F++  Y  +QI     +      L +  + V++D+SSPN+AKEMHVGHLRSTIIGD++
Sbjct: 88   NFFINPNYLEKQIDSAYASERLDVELTEVPQTVVIDYSSPNLAKEMHVGHLRSTIIGDSV 147

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
             R LE+ G++VVR NHVGDWGTQFGML+A++++   +       +A+L+ FY+ +K RFD
Sbjct: 148  VRALEFQGNNVVRQNHVGDWGTQFGMLLAYMEELRAEGQEIKKDLANLEVFYRAAKCRFD 207

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E E F +RA   VV LQ  + +    W    ++S    Q  Y RL V+L     RGES Y
Sbjct: 208  ESEAFAERARHLVVELQNGNEECLVLWTEFKEISISHCQDAYRRLGVSLERKDVRGESAY 267

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 805
               +  ++  L++KGLL+   G  +++      ++   +P+ I K DGGF Y TSDLAAI
Sbjct: 268  NDDLSNVIRDLKEKGLLQESQGANVVFLDRFKNKEGEPLPVIIQKKDGGFLYATSDLAAI 327

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R     A+ ++Y  D  QG+HF+ + E A+ A  +    T ++ + FG V+GED K F
Sbjct: 328  RYRQSVLNANRVLYFVDARQGLHFQQVFEVARLASFVK-ETTPLEHMAFGTVMGEDGKPF 386

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTR+G T KL++LL E   R+   +K+KN+  ++   EL      V    +KYADLS NR
Sbjct: 387  KTRTGSTPKLADLLTEAEERAYVLVKEKNQ--DMPEDELRHIAAVVGIASVKYADLSKNR 444

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF+FD ML   GNTA YLLYAYTR+ASI + A I+ + +     +  +S   EKE 
Sbjct: 445  TSDYVFNFDSMLSFEGNTAPYLLYAYTRVASIFKKAKIDMDSI-----TQDISFTDEKEK 499

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  +++ N+++  VT+    H LC YL++++  FS FY+ C  +    E + ++    
Sbjct: 500  DLANKIMQFNEIIKQVTKQGMPHFLCSYLFELAGLFSSFYEACPILSAPTEAQKQS---- 555

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RL LA  TAK +K+   +L I T
Sbjct: 556  RLKLAALTAKTLKQGLSLLGINT 578



 Score =  214 bits (545), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 189/329 (57%), Gaps = 25/329 (7%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N A+ L K       K+NP    +++A ++   L T    + +I K E+A PGF+
Sbjct: 41  GDFASNLALMLAK-----PAKQNP----RALAELIVKNLPT----SDIIIKTEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N F++  Y  +QI     +      L +  + V++D+SSPN+AKEMHVGHLRSTIIGD++
Sbjct: 88  NFFINPNYLEKQIDSAYASERLDVELTEVPQTVVIDYSSPNLAKEMHVGHLRSTIIGDSV 147

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
            R LE+ G++VVR NHVGDWGTQFGML+A++++   +       +A+L+ FY+ +K RFD
Sbjct: 148 VRALEFQGNNVVRQNHVGDWGTQFGMLLAYMEELRAEGQEIKKDLANLEVFYRAAKCRFD 207

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E E F +RA   VV LQ  + +    W    ++S    Q  Y RL V+L     RGES Y
Sbjct: 208 ESEAFAERARHLVVELQNGNEECLVLWTEFKEISISHCQDAYRRLGVSLERKDVRGESAY 267

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 415
              +  ++  L++KGLL+   G  +++      ++   +P+ I K DGGF Y TSDLAAI
Sbjct: 268 NDDLSNVIRDLKEKGLLQESQGANVVFLDRFKNKEGEPLPVIIQKKDGGFLYATSDLAAI 327

Query: 416 RQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           R R     A+ ++Y  D R    + QV +
Sbjct: 328 RYRQSVLNANRVLYFVDARQGLHFQQVFE 356



 Score =  214 bits (545), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 189/329 (57%), Gaps = 25/329 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N A+ L K       K+NP    +++A ++   L T    + +I K E+A PGF+
Sbjct: 41   GDFASNLALMLAK-----PAKQNP----RALAELIVKNLPT----SDIIIKTEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N F++  Y  +QI     +      L +  + V++D+SSPN+AKEMHVGHLRSTIIGD++
Sbjct: 88   NFFINPNYLEKQIDSAYASERLDVELTEVPQTVVIDYSSPNLAKEMHVGHLRSTIIGDSV 147

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
             R LE+ G++VVR NHVGDWGTQFGML+A++++   +       +A+L+ FY+ +K RFD
Sbjct: 148  VRALEFQGNNVVRQNHVGDWGTQFGMLLAYMEELRAEGQEIKKDLANLEVFYRAAKCRFD 207

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E E F +RA   VV LQ  + +    W    ++S    Q  Y RL V+L     RGES Y
Sbjct: 208  ESEAFAERARHLVVELQNGNEECLVLWTEFKEISISHCQDAYRRLGVSLERKDVRGESAY 267

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 1432
               +  ++  L++KGLL+   G  +++      ++   +P+ I K DGGF Y TSDLAAI
Sbjct: 268  NDDLSNVIRDLKEKGLLQESQGANVVFLDRFKNKEGEPLPVIIQKKDGGFLYATSDLAAI 327

Query: 1433 RQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            R R     A+ ++Y  D R    + QV +
Sbjct: 328  RYRQSVLNANRVLYFVDARQGLHFQQVFE 356


>gi|385855543|ref|YP_005902056.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240355]
 gi|421555153|ref|ZP_16001090.1| arginine--tRNA ligase [Neisseria meningitidis 98008]
 gi|421559472|ref|ZP_16005345.1| arginine--tRNA ligase [Neisseria meningitidis 92045]
 gi|421565911|ref|ZP_16011678.1| arginine--tRNA ligase [Neisseria meningitidis NM3081]
 gi|325204484|gb|ADY99937.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240355]
 gi|402331432|gb|EJU66769.1| arginine--tRNA ligase [Neisseria meningitidis 98008]
 gi|402335271|gb|EJU70537.1| arginine--tRNA ligase [Neisseria meningitidis 92045]
 gi|402342649|gb|EJU77808.1| arginine--tRNA ligase [Neisseria meningitidis NM3081]
          Length = 572

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 235/563 (41%), Positives = 318/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDAAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DD  K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDSAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +   
Sbjct: 489  EKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR--- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  223 bits (567), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 154/418 (36%), Positives = 216/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDAAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DD  K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDSAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  216 bits (549), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 185/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I+  + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDAAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DD  K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDSAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|421618374|ref|ZP_16059351.1| arginyl-tRNA ligase [Pseudomonas stutzeri KOS6]
 gi|409779705|gb|EKN59358.1| arginyl-tRNA ligase [Pseudomonas stutzeri KOS6]
          Length = 579

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 337/599 (56%), Gaps = 53/599 (8%)

Query: 481  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTAEGVLPEGLTPAIQVENTRDK---SHGDFASNIAMMLAKPAGL 57

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            K     P D+A+ +       +A  P  A+ I K+E+A PGF+N F +     E+++  +
Sbjct: 58   K-----PRDLAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAERLETAL 104

Query: 592  VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             +    V+  T  +  RV++D SSPN+AKEMHVGHLRSTIIGD + R+LEYLG +V+R N
Sbjct: 105  ADPQLAVRKATAAQ--RVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEYLGDEVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+L++K P        ++DL+ FY+ +K+RFDE   F  RA + VV 
Sbjct: 163  HVGDWGTQFGMLLAYLEEK-P--AAAESELSDLEQFYRAAKQRFDESAEFADRARELVVK 219

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D      W    D+S    QK+YDRLNV LT    +GES Y   +  +V  L  +G
Sbjct: 220  LQAGDSQCLNLWNRFNDISLSHCQKLYDRLNVRLTPADVKGESAYNAELPGIVDALRSQG 279

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            LL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD  +Y 
Sbjct: 280  LLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADRALYF 339

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF++  E A++AG ++    +++ +GFG + G D + FKTR G TVKL +LLD
Sbjct: 340  VDQRQALHFQMAFEVARRAGFVHEG-MQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLD 398

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E  +R+   +K KN   EL   EL +  +AV    +KYADLS +R  DY F+F+ ML   
Sbjct: 399  EAEQRAYALVKGKN--PELDEAELRQIARAVGISAVKYADLSKHRTSDYRFNFELMLSFE 456

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+AS+ R  G   +++        + LE E+E ALA  L +  +VL  
Sbjct: 457  GNTAPYLLYAYTRVASVFRKLGKGIDEI-----GGHIQLEAEQELALAARLAQFGEVLNN 511

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V      H LC YLYD++  FS FY++C  +  + E + ++    RL LA  T + +K+
Sbjct: 512  VGEKGEPHLLCTYLYDLAGLFSSFYEHCPILAAEQEEQKQS----RLRLAALTGRTLKQ 566



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 200/364 (54%), Gaps = 41/364 (11%)

Query: 91  LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
           + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1   MKDSIRHLIQQALVRLTAEGVLPEGLTPAIQVENTRDK---SHGDFASNIAMMLAKPAGL 57

Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
           K     P D+A+ +       +A  P  A+ I K+E+A PGF+N F +     E+++  +
Sbjct: 58  K-----PRDLAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAERLETAL 104

Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            +    V+  T  +  RV++D SSPN+AKEMHVGHLRSTIIGD + R+LEYLG +V+R N
Sbjct: 105 ADPQLAVRKATAAQ--RVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEYLGDEVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+L++K P        ++DL+ FY+ +K+RFDE   F  RA + VV 
Sbjct: 163 HVGDWGTQFGMLLAYLEEK-P--AAAESELSDLEQFYRAAKQRFDESAEFADRARELVVK 219

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D      W    D+S    QK+YDRLNV LT    +GES Y   +  +V  L  +G
Sbjct: 220 LQAGDSQCLNLWNRFNDISLSHCQKLYDRLNVRLTPADVKGESAYNAELPGIVDALRSQG 279

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           LL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD  +Y 
Sbjct: 280 LLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADRALYF 339

Query: 431 TDHR 434
            D R
Sbjct: 340 VDQR 343



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 200/364 (54%), Gaps = 41/364 (11%)

Query: 1108 LSDVFTHAVQVAF---------PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
            + D   H +Q A          PE       V +T +K     GDF  N AM L K    
Sbjct: 1    MKDSIRHLIQQALVRLTAEGVLPEGLTPAIQVENTRDK---SHGDFASNIAMMLAKPAGL 57

Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
            K     P D+A+ +       +A  P  A+ I K+E+A PGF+N F +     E+++  +
Sbjct: 58   K-----PRDLAEKL-------IAALPQDAQ-ISKVEIAGPGFLNFFQNSDALAERLETAL 104

Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             +    V+  T  +  RV++D SSPN+AKEMHVGHLRSTIIGD + R+LEYLG +V+R N
Sbjct: 105  ADPQLAVRKATAAQ--RVVIDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEYLGDEVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+L++K P        ++DL+ FY+ +K+RFDE   F  RA + VV 
Sbjct: 163  HVGDWGTQFGMLLAYLEEK-P--AAAESELSDLEQFYRAAKQRFDESAEFADRARELVVK 219

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D      W    D+S    QK+YDRLNV LT    +GES Y   +  +V  L  +G
Sbjct: 220  LQAGDSQCLNLWNRFNDISLSHCQKLYDRLNVRLTPADVKGESAYNAELPGIVDALRSQG 279

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            LL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD  +Y 
Sbjct: 280  LLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADRALYF 339

Query: 1448 TDHR 1451
             D R
Sbjct: 340  VDQR 343


>gi|262170936|ref|ZP_06038614.1| arginyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261892012|gb|EEY37998.1| arginyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 577

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 324/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PEQVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   +L+  E ++    VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAKALIESKN--PDLSADEKAKIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLALLGIET 573



 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 192/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  235 bits (599), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 191/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|385341595|ref|YP_005895466.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325201801|gb|ADY97255.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 572

 Score =  375 bits (963), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/561 (41%), Positives = 315/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K F
Sbjct: 321  RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E  +  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGTDEAGKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +     
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  D+L I
Sbjct: 546  RLQLAKLTGDTLKQGLDLLGI 566



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/416 (36%), Positives = 213/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIHAALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P +
Sbjct: 321 RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+   +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGTDEAGKIGKTVGIGAVKYADLSKN 436



 Score =  216 bits (550), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 183/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I   + +        +K   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R+    AD ++YV DHR
Sbjct: 321  RYRVGTLHADRLLYVVDHR 339


>gi|431928798|ref|YP_007241832.1| arginyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
 gi|431827085|gb|AGA88202.1| arginyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
          Length = 579

 Score =  375 bits (963), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 237/603 (39%), Positives = 337/603 (55%), Gaps = 68/603 (11%)

Query: 474  RMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            R++    L D  T A+QV             +T +K     GDF  N A+ L K    K 
Sbjct: 15   RLTSEGVLPDGLTPAIQVE------------NTKDK---SHGDFASNIALMLAKPAGLK- 58

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
                P D+A+ +       +A  P  A+V  K+E+A PGF+N F        Q  D +  
Sbjct: 59   ----PRDLAEKL-------IAALPQDAQV-SKVEIAGPGFLNFF--------QNSDALAG 98

Query: 594  GVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 644
             ++    + +L         RV+VD SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V
Sbjct: 99   RLETALSDAQLAVRKASATQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEV 158

Query: 645  VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 704
            +R NHVGDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFDE   F  RA +
Sbjct: 159  IRQNHVGDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFDESAEFADRARE 215

Query: 705  CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYL 761
             VV LQ  D      W    D+S    QK+YDRLNV LT    +GES Y   +  +V  L
Sbjct: 216  LVVKLQAGDAQCLSLWTRFNDISLSHCQKLYDRLNVKLTPADVKGESAYNSELLGIVDAL 275

Query: 762  EKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 816
             +KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD 
Sbjct: 276  REKGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADR 335

Query: 817  IVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLS 876
             +Y  D  Q +HF++  E A++AG ++ +  +++ +GFG + G D + FKTR G TVKL 
Sbjct: 336  ALYFVDQRQALHFQMAFEVARRAGFVHES-MQLEHMGFGTMNGADGRPFKTRDGGTVKLI 394

Query: 877  ELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKM 936
            +LLDE  +R+   +K KN   EL   EL +  +AV    +KYADLS +R  DY F+F+ M
Sbjct: 395  DLLDEAEQRAYALVKGKN--PELDEAELRQIARAVGISAVKYADLSKHRTSDYRFNFELM 452

Query: 937  LDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMND 996
            L   GNTA YLLYAYTR+AS+ R  G   ++      +  + LE E+E ALA  L +  +
Sbjct: 453  LSFEGNTAPYLLYAYTRVASVFRKLGKGIDE-----STGRIRLEAEQELALAAKLAQFGE 507

Query: 997  VLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
            VL  V      H LC YLYD++  FS FY++C  +  + E + ++    RL LA  T K 
Sbjct: 508  VLNSVGEKGEPHLLCAYLYDLAGLFSSFYEHCPILSAEQEDQKQS----RLRLAALTGKT 563

Query: 1057 MKK 1059
            +K+
Sbjct: 564  LKQ 566



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 199/368 (54%), Gaps = 56/368 (15%)

Query: 84  RMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           R++    L D  T A+QV             +T +K     GDF  N A+ L K    K 
Sbjct: 15  RLTSEGVLPDGLTPAIQVE------------NTKDK---SHGDFASNIALMLAKPAGLK- 58

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
               P D+A+ +       +A  P  A+V  K+E+A PGF+N F        Q  D +  
Sbjct: 59  ----PRDLAEKL-------IAALPQDAQV-SKVEIAGPGFLNFF--------QNSDALAG 98

Query: 204 GVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 254
            ++    + +L         RV+VD SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V
Sbjct: 99  RLETALSDAQLAVRKASATQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEV 158

Query: 255 VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 314
           +R NHVGDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFDE   F  RA +
Sbjct: 159 IRQNHVGDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFDESAEFADRARE 215

Query: 315 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYL 371
            VV LQ  D      W    D+S    QK+YDRLNV LT    +GES Y   +  +V  L
Sbjct: 216 LVVKLQAGDAQCLSLWTRFNDISLSHCQKLYDRLNVKLTPADVKGESAYNSELLGIVDAL 275

Query: 372 EKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 426
            +KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD 
Sbjct: 276 REKGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADR 335

Query: 427 IVYVTDHR 434
            +Y  D R
Sbjct: 336 ALYFVDQR 343



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 199/368 (54%), Gaps = 56/368 (15%)

Query: 1101 RMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            R++    L D  T A+QV             +T +K     GDF  N A+ L K    K 
Sbjct: 15   RLTSEGVLPDGLTPAIQVE------------NTKDK---SHGDFASNIALMLAKPAGLK- 58

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
                P D+A+ +       +A  P  A+V  K+E+A PGF+N F        Q  D +  
Sbjct: 59   ----PRDLAEKL-------IAALPQDAQV-SKVEIAGPGFLNFF--------QNSDALAG 98

Query: 1221 GVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 1271
             ++    + +L         RV+VD SSPN+AKEMHVGHLRSTIIGD + R+LE+LG +V
Sbjct: 99   RLETALSDAQLAVRKASATQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEV 158

Query: 1272 VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 1331
            +R NHVGDWGTQFGML+A+L++K P        +ADL+ FY+ +K+RFDE   F  RA +
Sbjct: 159  IRQNHVGDWGTQFGMLLAYLEEK-P--AAAESELADLEQFYRAAKQRFDESAEFADRARE 215

Query: 1332 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYL 1388
             VV LQ  D      W    D+S    QK+YDRLNV LT    +GES Y   +  +V  L
Sbjct: 216  LVVKLQAGDAQCLSLWTRFNDISLSHCQKLYDRLNVKLTPADVKGESAYNSELLGIVDAL 275

Query: 1389 EKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 1443
             +KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA+R R +   AD 
Sbjct: 276  REKGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLHADR 335

Query: 1444 IVYVTDHR 1451
             +Y  D R
Sbjct: 336  ALYFVDQR 343


>gi|56461560|ref|YP_156841.1| arginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81362378|sp|Q5QV46.1|SYR_IDILO RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|56180570|gb|AAV83292.1| Arginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 580

 Score =  375 bits (963), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 224/572 (39%), Positives = 326/572 (56%), Gaps = 54/572 (9%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N A+ L K       K NP  +A++I + V            ++ K+++A PGF+
Sbjct: 41   GDFATNLALMLAK-----PAKSNPRQLAEAIVAAVPEN--------SLLSKMDIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKL-----RVLVDFSSPNIAKEMHVGHLRSTII 629
            N  +S+    +Q+KD +   +   +LN  +      +++D+SSPN+AKEMHVGHLRS II
Sbjct: 88   NFTISQ----DQLKDQLTAMLNSDSLNVDVAEESKTIVIDYSSPNLAKEMHVGHLRSAII 143

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD +SR+ E+LGH V+R NHVGDWGTQFGML+A+++    D  +    +++L+ FYK +K
Sbjct: 144  GDAVSRVCEFLGHKVIRQNHVGDWGTQFGMLLAYMEA--LDNQSAEYELSNLETFYKAAK 201

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            +RFDE E F  RA Q VV LQ  D    K W    DVS    Q +YDRL V LT      
Sbjct: 202  QRFDESEEFADRARQLVVKLQSGDEYCLKLWNQFIDVSLSHCQDVYDRLGVKLTRDDVMA 261

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 801
            ES Y   +  ++ +L +KGLL  D G + ++     G++   +P+ + K  GG+ Y T+D
Sbjct: 262  ESAYNDKLPGVIEHLREKGLLTEDQGAQCVFLEEYKGKEGEPLPIIVQKKGGGYLYATTD 321

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAAI  R +E   D ++Y  D  Q +HF  +   A+KAG +  +  +++  GFG V+G+D
Sbjct: 322  LAAIEYRQKELGGDHLMYFVDARQALHFDQIFTLARKAGFVEGD-IQLNHYGFGTVMGKD 380

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQ-----AVAYGCI 916
             K +K+R G   KL++LLDE  RR+L+ L+ K        T+LSE QQ      V    +
Sbjct: 381  GKPYKSRDGGVTKLADLLDEAERRALELLQQKT-------TDLSEEQQKRVAEVVGISSV 433

Query: 917  KYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP 976
            KYADLS NR  DYVF ++ ML   GNTA YLLYA+TR+ SI    G  + D     ++  
Sbjct: 434  KYADLSKNRTSDYVFDWNHMLTFEGNTAPYLLYAFTRVNSIFDRLGDTAFD-----RNAD 488

Query: 977  VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE 1036
            + L  E+E ALA  L+R N+VL  V      H LC +L+D++  FS FY+ C  + ++ E
Sbjct: 489  IILSDERELALANQLVRFNEVLHQVQDKAMPHFLCGFLFDLAGRFSSFYEACPILNQEDE 548

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
                 +   RL L+  TA V+K+  ++L I T
Sbjct: 549  ----ALRNSRLKLSMLTANVLKQGLELLGIPT 576



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/403 (35%), Positives = 209/403 (51%), Gaps = 35/403 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N A+ L K       K NP  +A++I + V            ++ K+++A PGF+
Sbjct: 41  GDFATNLALMLAK-----PAKSNPRQLAEAIVAAVPEN--------SLLSKMDIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKL-----RVLVDFSSPNIAKEMHVGHLRSTII 239
           N  +S+    +Q+KD +   +   +LN  +      +++D+SSPN+AKEMHVGHLRS II
Sbjct: 88  NFTISQ----DQLKDQLTAMLNSDSLNVDVAEESKTIVIDYSSPNLAKEMHVGHLRSAII 143

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD +SR+ E+LGH V+R NHVGDWGTQFGML+A+++    D  +    +++L+ FYK +K
Sbjct: 144 GDAVSRVCEFLGHKVIRQNHVGDWGTQFGMLLAYMEA--LDNQSAEYELSNLETFYKAAK 201

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           +RFDE E F  RA Q VV LQ  D    K W    DVS    Q +YDRL V LT      
Sbjct: 202 QRFDESEEFADRARQLVVKLQSGDEYCLKLWNQFIDVSLSHCQDVYDRLGVKLTRDDVMA 261

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 411
           ES Y   +  ++ +L +KGLL  D G + ++     G++   +P+ + K  GG+ Y T+D
Sbjct: 262 ESAYNDKLPGVIEHLREKGLLTEDQGAQCVFLEEYKGKEGEPLPIIVQKKGGGYLYATTD 321

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---N 468
           LAAI  R +E   D ++Y  D R      Q      K   +         G    M    
Sbjct: 322 LAAIEYRQKELGGDHLMYFVDARQALHFDQIFTLARKAGFVEGDIQLNHYGFGTVMGKDG 381

Query: 469 VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 511
            P + R      L+D+   A + A   L  KT  ++   +K V
Sbjct: 382 KPYKSRDGGVTKLADLLDEAERRALELLQQKTTDLSEEQQKRV 424



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/323 (39%), Positives = 186/323 (57%), Gaps = 32/323 (9%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N A+ L K       K NP  +A++I + V            ++ K+++A PGF+
Sbjct: 41   GDFATNLALMLAK-----PAKSNPRQLAEAIVAAVPEN--------SLLSKMDIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKL-----RVLVDFSSPNIAKEMHVGHLRSTII 1256
            N  +S+    +Q+KD +   +   +LN  +      +++D+SSPN+AKEMHVGHLRS II
Sbjct: 88   NFTISQ----DQLKDQLTAMLNSDSLNVDVAEESKTIVIDYSSPNLAKEMHVGHLRSAII 143

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD +SR+ E+LGH V+R NHVGDWGTQFGML+A+++    D  +    +++L+ FYK +K
Sbjct: 144  GDAVSRVCEFLGHKVIRQNHVGDWGTQFGMLLAYMEA--LDNQSAEYELSNLETFYKAAK 201

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            +RFDE E F  RA Q VV LQ  D    K W    DVS    Q +YDRL V LT      
Sbjct: 202  QRFDESEEFADRARQLVVKLQSGDEYCLKLWNQFIDVSLSHCQDVYDRLGVKLTRDDVMA 261

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 1428
            ES Y   +  ++ +L +KGLL  D G + ++     G++   +P+ + K  GG+ Y T+D
Sbjct: 262  ESAYNDKLPGVIEHLREKGLLTEDQGAQCVFLEEYKGKEGEPLPIIVQKKGGGYLYATTD 321

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LAAI  R +E   D ++Y  D R
Sbjct: 322  LAAIEYRQKELGGDHLMYFVDAR 344


>gi|87122857|ref|ZP_01078727.1| arginyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161868|gb|EAQ63163.1| arginyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 577

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 219/565 (38%), Positives = 324/565 (57%), Gaps = 35/565 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K  K      NP + AQ +  ++         L+ V DK+E+A PG
Sbjct: 35   QFGDYQANGMMGVAKKLK-----TNPREFAQKVLDLL--------DLSDVADKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            F+N+FL   +    +  +  +  +    + K   ++VD+SSPN+AKEMHVGHLRST+IGD
Sbjct: 82   FINIFLKNDWMSGALASLRKSARLDIAQVEKAQTIVVDYSSPNLAKEMHVGHLRSTVIGD 141

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
             + R LE+LGH+VVR NHVGDWGTQFGML+A+++    +    S  ++DL+ FY+ +K  
Sbjct: 142  AVVRTLEFLGHNVVRQNHVGDWGTQFGMLLAYMERLRQENTEISMALSDLETFYRAAKTC 201

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG---ES 748
            FD+DE F  RA + VV+LQ  D +    W+   ++S    +  Y  L V+LT      ES
Sbjct: 202  FDDDEAFAARARELVVSLQSGDEECLALWQEFINISLEHCEATYKTLGVSLTRENVMPES 261

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLA 803
             Y   +  +V  L+++ LL+  +G + ++ E+     G I P+ + K+ GGF Y T+DLA
Sbjct: 262  AYNDDLHNVVAALKEQDLLQESNGAQCVFMEEFANKEGEITPVIVQKTGGGFLYATTDLA 321

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
            A+R R +    D  +Y  D  Q +HF+ +    +KAG + P +T ++ + FG V+G D K
Sbjct: 322  ALRYRQDVLNFDRGLYFVDARQSLHFQQIYTLGRKAGFVKP-ETSLEHMPFGTVMGTDGK 380

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSG   KLS+LL E   R+   + +KN   E+   EL    + V    +KYADLS 
Sbjct: 381  PFKTRSGTVAKLSDLLAEAQDRAYQLVAEKN--PEMEEDELRNIGRVVGIASVKYADLSK 438

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF++D ML   GNTA YLLYAY+R+ASI R + I+     VA  +  +SL   +
Sbjct: 439  NRTSDYVFNWDTMLSFEGNTAPYLLYAYSRVASIVRRSEID-----VANLTGDISLAESQ 493

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E ALA  L++  + +  V  D   H+LC YLY+++  F  FY+ C  +  +AE ++K   
Sbjct: 494  ERALAVKLMQFEEAVQQVANDGMPHNLCAYLYELAGTFMTFYEACPIL--NAEDELK--- 548

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL LA  TA  +K+   +L I T
Sbjct: 549  NSRLQLALNTASTLKQGLSLLGIET 573



 Score =  223 bits (567), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/395 (35%), Positives = 210/395 (53%), Gaps = 35/395 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K  K      NP + AQ +  ++         L+ V DK+E+A PG
Sbjct: 35  QFGDYQANGMMGVAKKLK-----TNPREFAQKVLDLL--------DLSDVADKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           F+N+FL   +    +  +  +  +    + K   ++VD+SSPN+AKEMHVGHLRST+IGD
Sbjct: 82  FINIFLKNDWMSGALASLRKSARLDIAQVEKAQTIVVDYSSPNLAKEMHVGHLRSTVIGD 141

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
            + R LE+LGH+VVR NHVGDWGTQFGML+A+++    +    S  ++DL+ FY+ +K  
Sbjct: 142 AVVRTLEFLGHNVVRQNHVGDWGTQFGMLLAYMERLRQENTEISMALSDLETFYRAAKTC 201

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG---ES 358
           FD+DE F  RA + VV+LQ  D +    W+   ++S    +  Y  L V+LT      ES
Sbjct: 202 FDDDEAFAARARELVVSLQSGDEECLALWQEFINISLEHCEATYKTLGVSLTRENVMPES 261

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLA 413
            Y   +  +V  L+++ LL+  +G + ++ E+     G I P+ + K+ GGF Y T+DLA
Sbjct: 262 AYNDDLHNVVAALKEQDLLQESNGAQCVFMEEFANKEGEITPVIVQKTGGGFLYATTDLA 321

Query: 414 AIRQRIEEEKADWIVYVTDHR-SYHQVLQAIAEEEKKQGISSSSSS-------QTKGTAK 465
           A+R R +    D  +Y  D R S H   Q I    +K G     +S          GT  
Sbjct: 322 ALRYRQDVLNFDRGLYFVDARQSLH--FQQIYTLGRKAGFVKPETSLEHMPFGTVMGTDG 379

Query: 466 KMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKT 500
           K   P + R      LSD+   A   A+  + +K 
Sbjct: 380 K---PFKTRSGTVAKLSDLLAEAQDRAYQLVAEKN 411



 Score =  219 bits (559), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/321 (38%), Positives = 185/321 (57%), Gaps = 22/321 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K  K      NP + AQ +  ++         L+ V DK+E+A PG
Sbjct: 35   QFGDYQANGMMGVAKKLK-----TNPREFAQKVLDLL--------DLSDVADKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            F+N+FL   +    +  +  +  +    + K   ++VD+SSPN+AKEMHVGHLRST+IGD
Sbjct: 82   FINIFLKNDWMSGALASLRKSARLDIAQVEKAQTIVVDYSSPNLAKEMHVGHLRSTVIGD 141

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
             + R LE+LGH+VVR NHVGDWGTQFGML+A+++    +    S  ++DL+ FY+ +K  
Sbjct: 142  AVVRTLEFLGHNVVRQNHVGDWGTQFGMLLAYMERLRQENTEISMALSDLETFYRAAKTC 201

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG---ES 1375
            FD+DE F  RA + VV+LQ  D +    W+   ++S    +  Y  L V+LT      ES
Sbjct: 202  FDDDEAFAARARELVVSLQSGDEECLALWQEFINISLEHCEATYKTLGVSLTRENVMPES 261

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSI-PMTIVKSDGGFTYDTSDLA 1430
             Y   +  +V  L+++ LL+  +G + ++ E+     G I P+ + K+ GGF Y T+DLA
Sbjct: 262  AYNDDLHNVVAALKEQDLLQESNGAQCVFMEEFANKEGEITPVIVQKTGGGFLYATTDLA 321

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
            A+R R +    D  +Y  D R
Sbjct: 322  ALRYRQDVLNFDRGLYFVDAR 342


>gi|117617648|ref|YP_858536.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
            7966]
 gi|117559055|gb|ABK36003.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
            7966]
          Length = 581

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 226/565 (40%), Positives = 322/565 (56%), Gaps = 39/565 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVEAMVASANANVKLPVPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 694
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELRDLEAFYTQAKRHYDE 206

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 751
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNVSLTNKDIMGESMYN 266

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 803
              + ++V  L+ +GL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPEIVADLKARGLAVESEGATVVFLDEYKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
              + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D +
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYV-PESVPLEHHAFGMMLGKDGR 382

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             +KTRSG TVKL ELL+E   R+   L+ +N  ++L+  E ++   A+A G +KYADLS 
Sbjct: 383  PYKTRSGGTVKLVELLNEAEERASALLESRN--SDLSAEEKAQVVHAIAMGAVKYADLSK 440

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DY+F +D ML   GNTA YL YAYTRI SI R AG++++ L     S  V L  E 
Sbjct: 441  NRTTDYIFDWDLMLSFEGNTAPYLQYAYTRIQSIFRKAGVDADTL-----SGHVILNEEA 495

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA+ L++ +D +  V      H LC YLY++S  F  FY+ C  I KD  G  +   
Sbjct: 496  EEVLAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFYEAC-PINKD--GVDEATR 552

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RLLL  ATAKV+K    +L I T
Sbjct: 553  QSRLLLCAATAKVLKLGLGVLGIHT 577



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/329 (38%), Positives = 189/329 (57%), Gaps = 28/329 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88  NFFFDPSWLAGQVEAMVASANANVKLPVPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148 RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELRDLEAFYTQAKRHYDE 206

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 361
           DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLNV+LT +   GES Y 
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNVSLTNKDIMGESMYN 266

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 413
             + ++V  L+ +GL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267 DMLPEIVADLKARGLAVESEGATVVFLDEYKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
             + R E   AD ++Y  D R +  ++QA
Sbjct: 324 CAKYRYETLGADRVMYFIDSRQHQHLMQA 352



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 188/328 (57%), Gaps = 28/328 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVEAMVASANANVKLPVPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELRDLEAFYTQAKRHYDE 206

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 1378
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNVSLTNKDIMGESMYN 266

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
              + ++V  L+ +GL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPEIVADLKARGLAVESEGATVVFLDEYKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 1431 AIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
              + R E   AD ++Y  D R +  ++Q
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQ 351


>gi|393764444|ref|ZP_10353055.1| arginyl-tRNA ligase [Alishewanella agri BL06]
 gi|392604632|gb|EIW87532.1| arginyl-tRNA ligase [Alishewanella agri BL06]
          Length = 579

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/597 (37%), Positives = 344/597 (57%), Gaps = 37/597 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  +  +  Q AF  LG    +  +  +    +FGD+Q N AM+  K  K      NP  
Sbjct: 3    IKQLLANKTQDAFITLGLPAETNPAVTQSTRPEFGDYQINGAMSAAKQLK-----TNPRQ 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
            +A+ + +++  +   +        K+E+A PGF+NV L   +   ++     N     + 
Sbjct: 58   LAEQLVALLALDDLAS--------KVEIAGPGFINVTLKPEWLAGELAQAASNARLGVSA 109

Query: 601  NKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
            N + + ++VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDWGTQFGM
Sbjct: 110  NPQPQTIVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDWGTQFGM 169

Query: 660  LIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 718
            LIAHL+DK  + +  +S  +ADL+ FY+++KKRFD++  F  ++   VV LQ  D   +K
Sbjct: 170  LIAHLEDKLAEGVDLESVALADLEDFYRQAKKRFDDEAGFADKSRDYVVKLQSGDAHCQK 229

Query: 719  AWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
             W++  D S +   ++Y +LNVTLT+   + ES Y   ++ +V  L   G+   D G  +
Sbjct: 230  LWQLFIDTSVKHSNEVYQKLNVTLTDADIKPESAYNPMLQPIVDQLVAAGIAVEDQGALV 289

Query: 776  MW------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
            ++       E + S P  I K+ GGF Y T+DLAA + R  +  AD I+  TD  Q +HF
Sbjct: 290  VFLSELADKEGKPS-PFIIQKTGGGFLYATTDLAACQYRSHQLAADRIIIFTDARQALHF 348

Query: 830  RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
            + +E  A+KAG+L  + T  D   FG ++GED K FKTR+G TVKL+ELL+E + R+   
Sbjct: 349  KQVELTARKAGLLRAD-TAYDHCPFGTMMGEDGKPFKTRTGGTVKLAELLEEAVVRADAV 407

Query: 890  LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
            +++K+  +EL+  E++E  + V  G +K+ADLS NR  DY+FS+D ML   G TA YL Y
Sbjct: 408  VREKS--SELSEQEIAEIARKVGIGAVKFADLSKNRTSDYIFSWDAMLAFEGATAPYLQY 465

Query: 950  AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
            AYTR+ SI R A +        +   P+ L  E+E  LA  +LR  + L  V +D   + 
Sbjct: 466  AYTRVRSILRKAEVAD------SFQAPIVLTAEQERLLAVKILRFEETLQQVMKDAQPNL 519

Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            LC YLY++++ F  FY+ C  ++   +G        RL+L+  +A+++ K  ++L I
Sbjct: 520  LCSYLYELASLFMTFYEACPILK---DGVDPAERDSRLMLSIISARLLAKGLNLLGI 573



 Score =  218 bits (556), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 200/355 (56%), Gaps = 25/355 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  +  +  Q AF  LG    +  +  +    +FGD+Q N AM+  K  K      NP  
Sbjct: 3   IKQLLANKTQDAFITLGLPAETNPAVTQSTRPEFGDYQINGAMSAAKQLK-----TNPRQ 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 210
           +A+ + +++  +   +        K+E+A PGF+NV L   +   ++     N     + 
Sbjct: 58  LAEQLVALLALDDLAS--------KVEIAGPGFINVTLKPEWLAGELAQAASNARLGVSA 109

Query: 211 NKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 269
           N + + ++VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDWGTQFGM
Sbjct: 110 NPQPQTIVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDWGTQFGM 169

Query: 270 LIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 328
           LIAHL+DK  + +  +S  +ADL+ FY+++KKRFD++  F  ++   VV LQ  D   +K
Sbjct: 170 LIAHLEDKLAEGVDLESVALADLEDFYRQAKKRFDDEAGFADKSRDYVVKLQSGDAHCQK 229

Query: 329 AWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
            W++  D S +   ++Y +LNVTLT+   + ES Y   ++ +V  L   G+   D G  +
Sbjct: 230 LWQLFIDTSVKHSNEVYQKLNVTLTDADIKPESAYNPMLQPIVDQLVAAGIAVEDQGALV 289

Query: 386 MW------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
           ++       E + S P  I K+ GGF Y T+DLAA + R  +  AD I+  TD R
Sbjct: 290 VFLSELADKEGKPS-PFIIQKTGGGFLYATTDLAACQYRSHQLAADRIIIFTDAR 343



 Score =  218 bits (556), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 200/355 (56%), Gaps = 25/355 (7%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  +  +  Q AF  LG    +  +  +    +FGD+Q N AM+  K  K      NP  
Sbjct: 3    IKQLLANKTQDAFITLGLPAETNPAVTQSTRPEFGDYQINGAMSAAKQLK-----TNPRQ 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
            +A+ + +++  +   +        K+E+A PGF+NV L   +   ++     N     + 
Sbjct: 58   LAEQLVALLALDDLAS--------KVEIAGPGFINVTLKPEWLAGELAQAASNARLGVSA 109

Query: 1228 NKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 1286
            N + + ++VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDWGTQFGM
Sbjct: 110  NPQPQTIVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDWGTQFGM 169

Query: 1287 LIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 1345
            LIAHL+DK  + +  +S  +ADL+ FY+++KKRFD++  F  ++   VV LQ  D   +K
Sbjct: 170  LIAHLEDKLAEGVDLESVALADLEDFYRQAKKRFDDEAGFADKSRDYVVKLQSGDAHCQK 229

Query: 1346 AWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
             W++  D S +   ++Y +LNVTLT+   + ES Y   ++ +V  L   G+   D G  +
Sbjct: 230  LWQLFIDTSVKHSNEVYQKLNVTLTDADIKPESAYNPMLQPIVDQLVAAGIAVEDQGALV 289

Query: 1403 MW------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            ++       E + S P  I K+ GGF Y T+DLAA + R  +  AD I+  TD R
Sbjct: 290  VFLSELADKEGKPS-PFIIQKTGGGFLYATTDLAACQYRSHQLAADRIIIFTDAR 343


>gi|86147649|ref|ZP_01065958.1| arginyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218710198|ref|YP_002417819.1| arginyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782991|sp|B7VI24.1|SYR_VIBSL RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|85834560|gb|EAQ52709.1| arginyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218323217|emb|CAV19394.1| Arginyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 577

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 320/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FL   +  +Q    + +     +  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDETFLAQQADAALADSRLGVSAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQGGDAYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ +GL +  DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLSNIVSDLQTQGLAKESDGAQVVFLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R EE  AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV-PESVSLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   EL   E       VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEVRATQLIESKN--PELAEDEKKTIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF ++ ML   GNTA Y+ YAYTR+ASI   AGI+ + L        + +  EKE
Sbjct: 439  RTTDYVFDWENMLAFEGNTAPYMQYAYTRVASIFAKAGISMDSLE-----GEIKITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    TV  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEACPILVAEDE----TVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLSLLGIET 573



 Score =  236 bits (603), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/414 (35%), Positives = 222/414 (53%), Gaps = 32/414 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35  QFGDYQANGIMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FL   +  +Q    + +     +  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FLNIFLDETFLAQQADAALADSRLGVSAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEEFAVKARGYVVKLQGGDAYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ +GL +  DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNHMLSNIVSDLQTQGLAKESDGAQVVFLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
            + R EE  AD ++Y  D R +  ++QA     K   +  S S +       +     P 
Sbjct: 322 AKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPF 381

Query: 472 RDRMSVRDYLSDVF-------THAVQVAFPELG-DKTASVASTNEKYVHKFGDF 517
           + R      L+D+        T  ++   PEL  D+  ++A+T      K+ D 
Sbjct: 382 KTRAGGTVRLADLLDEAEVRATQLIESKNPELAEDEKKTIANTVAMAAVKYADL 435



 Score =  234 bits (597), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ +  V+        +L  +  K+E+A PG
Sbjct: 35   QFGDYQANGIMGVAKRLG-----TNPREFAQKVLDVL--------NLDGIASKVEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FL   +  +Q    + +     +  +   ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FLNIFLDETFLAQQADAALADSRLGVSAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+ FY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D    + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEEFAVKARGYVVKLQGGDAYCAEMWKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ +GL +  DG ++++ +   ++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNHMLSNIVSDLQTQGLAKESDGAQVVFLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R EE  AD ++Y  D R +  ++Q
Sbjct: 322  AKYRFEELGADRVLYFIDSRQHQHLMQ 348


>gi|152993784|ref|YP_001359505.1| arginyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425645|dbj|BAF73148.1| arginyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 565

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 344/592 (58%), Gaps = 41/592 (6%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L +     ++ AF + G     + S +E    +FGD+Q N AMAL K  +     KNP +
Sbjct: 3    LKEEVNKVIKAAFDKAGIDAEPI-SVSEATKPEFGDYQFNGAMALSKKLR-----KNPRE 56

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQP 597
            IA        SE+  +   + ++ K E+A PGF+N++L+  +  +  +    +   G++ 
Sbjct: 57   IA--------SEIMEHLDFSGIVAKAEIAGPGFINLWLNDTWVAQACEKARADERLGIEK 108

Query: 598  PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
             +    ++V+VD+S PN+AK+MHVGHLRSTIIGDT++ LLE+LG +V+R NH+GDWGTQF
Sbjct: 109  TS--NPIKVVVDYSGPNMAKQMHVGHLRSTIIGDTLANLLEFLGDEVIRQNHIGDWGTQF 166

Query: 658  GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
            GMLIA+L+++  D    S  + DL+ FYK++KKRFDEDE F  +A + VV +Q  D    
Sbjct: 167  GMLIAYLEERGED---GSGSLKDLEQFYKDAKKRFDEDEAFADKAREYVVKIQSGDEHCL 223

Query: 718  KAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
              W+   D+S    +++YD+L V LT    + ESFY + + ++V  L K+G L   +G +
Sbjct: 224  NLWQKFIDISLGHCEEVYDKLCVRLTREDVKAESFYNEDLPEVVADLAKEGRLRESEGAQ 283

Query: 775  IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
             ++ E+   IP+ + K DGG+ Y T+DLAA+R R     A  I YV D  QG HF+ + +
Sbjct: 284  CVFFEE-DEIPVIVQKGDGGYLYATTDLAALRYRANILGAKRISYVVDARQGEHFKQIFK 342

Query: 835  CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
             AK +G + P   R++ V FG ++ +  K FKTR G TVKL +LLDE + ++   +K+K+
Sbjct: 343  VAKMSGFV-PKDVRLEHVAFGTMMDKGGKPFKTRDGGTVKLIDLLDEAVVKAKAAIKEKD 401

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
             ++E    E+ +  + +  G +KYADLS NR  +Y+F++DKML   GNT++Y+ YAY RI
Sbjct: 402  DYSE---EEVEKLAKTIGIGAVKYADLSINRESNYIFNWDKMLSFEGNTSLYMQYAYARI 458

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
             SI R  G + +   V       +LEH     L   LLR  ++L     D   + +  YL
Sbjct: 459  QSIFRRYGGDIKGDIVITD----ALEHR----LGVMLLRFEEILERAAEDAAPNQITTYL 510

Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            Y++ T F  FY+    ++   EG  +     RL LA+ TAK +K+  DIL I
Sbjct: 511  YELVTLFMRFYEQNPILK---EGVDEATKQSRLALADMTAKTIKQGLDILGI 559



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/350 (39%), Positives = 209/350 (59%), Gaps = 26/350 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L +     ++ AF + G     + S +E    +FGD+Q N AMAL K  +     KNP +
Sbjct: 3   LKEEVNKVIKAAFDKAGIDAEPI-SVSEATKPEFGDYQFNGAMALSKKLR-----KNPRE 56

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQP 207
           IA        SE+  +   + ++ K E+A PGF+N++L+  +  +  +    +   G++ 
Sbjct: 57  IA--------SEIMEHLDFSGIVAKAEIAGPGFINLWLNDTWVAQACEKARADERLGIEK 108

Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
            +    ++V+VD+S PN+AK+MHVGHLRSTIIGDT++ LLE+LG +V+R NH+GDWGTQF
Sbjct: 109 TS--NPIKVVVDYSGPNMAKQMHVGHLRSTIIGDTLANLLEFLGDEVIRQNHIGDWGTQF 166

Query: 268 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
           GMLIA+L+++  D    S  + DL+ FYK++KKRFDEDE F  +A + VV +Q  D    
Sbjct: 167 GMLIAYLEERGED---GSGSLKDLEQFYKDAKKRFDEDEAFADKAREYVVKIQSGDEHCL 223

Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
             W+   D+S    +++YD+L V LT    + ESFY + + ++V  L K+G L   +G +
Sbjct: 224 NLWQKFIDISLGHCEEVYDKLCVRLTREDVKAESFYNEDLPEVVADLAKEGRLRESEGAQ 283

Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
            ++ E+   IP+ + K DGG+ Y T+DLAA+R R     A  I YV D R
Sbjct: 284 CVFFEE-DEIPVIVQKGDGGYLYATTDLAALRYRANILGAKRISYVVDAR 332



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/350 (39%), Positives = 209/350 (59%), Gaps = 26/350 (7%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L +     ++ AF + G     + S +E    +FGD+Q N AMAL K  +     KNP +
Sbjct: 3    LKEEVNKVIKAAFDKAGIDAEPI-SVSEATKPEFGDYQFNGAMALSKKLR-----KNPRE 56

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQP 1224
            IA        SE+  +   + ++ K E+A PGF+N++L+  +  +  +    +   G++ 
Sbjct: 57   IA--------SEIMEHLDFSGIVAKAEIAGPGFINLWLNDTWVAQACEKARADERLGIEK 108

Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
             +    ++V+VD+S PN+AK+MHVGHLRSTIIGDT++ LLE+LG +V+R NH+GDWGTQF
Sbjct: 109  TS--NPIKVVVDYSGPNMAKQMHVGHLRSTIIGDTLANLLEFLGDEVIRQNHIGDWGTQF 166

Query: 1285 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
            GMLIA+L+++  D    S  + DL+ FYK++KKRFDEDE F  +A + VV +Q  D    
Sbjct: 167  GMLIAYLEERGED---GSGSLKDLEQFYKDAKKRFDEDEAFADKAREYVVKIQSGDEHCL 223

Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
              W+   D+S    +++YD+L V LT    + ESFY + + ++V  L K+G L   +G +
Sbjct: 224  NLWQKFIDISLGHCEEVYDKLCVRLTREDVKAESFYNEDLPEVVADLAKEGRLRESEGAQ 283

Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             ++ E+   IP+ + K DGG+ Y T+DLAA+R R     A  I YV D R
Sbjct: 284  CVFFEE-DEIPVIVQKGDGGYLYATTDLAALRYRANILGAKRISYVVDAR 332


>gi|449144588|ref|ZP_21775403.1| arginyl-tRNA ligase [Vibrio mimicus CAIM 602]
 gi|449080089|gb|EMB51008.1| arginyl-tRNA ligase [Vibrio mimicus CAIM 602]
          Length = 577

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 323/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PEQVSLEHHAFGMMLGKDGRP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   +L+  E ++    VA   +KYADLS +
Sbjct: 381  FKTRAGGTVRLADLLDEAEERAKALIESKN--PDLSADEKAKIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 494  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SVKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 550  SRLKLAALTAKTIKQGLALLGIET 573



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 262 YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGADRVLYFIDSRQHQHLMQA 349



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 35   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 82   FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 142  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 202  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 262  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGADRVLYFIDSRQHQHLMQ 348


>gi|159035826|ref|YP_001535079.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157914661|gb|ABV96088.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 572

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/587 (38%), Positives = 327/587 (55%), Gaps = 43/587 (7%)

Query: 496  LGDKTASVASTNEKYV---HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSE 552
            LG   A+VA      V    +  D+QC+ A++L +        + P DIA        +E
Sbjct: 11   LGPAFAAVAGAPVDPVLRRSQHADYQCDAALSLARRLG-----RRPRDIA--------AE 57

Query: 553  LATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVD 609
            +     LA +   + V+ PGF+N+ ++    G  +    V+   GV P    +   V+VD
Sbjct: 58   VLGQVELADLCSAVAVSGPGFINLTVADSALGTLLSTAAVDSRLGVAPSAATET--VIVD 115

Query: 610  FSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP 669
            +SSPN+AKEMHVGHLR T+IGD   RLLE+ GH V++ NH+GDWGT FGMLI HL D   
Sbjct: 116  YSSPNVAKEMHVGHLRGTVIGDAAVRLLEWRGHQVIKANHLGDWGTPFGMLIEHLLDLGE 175

Query: 670  DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRR 729
                    + DL +FYK ++ +FD D+ F++RA + VVALQR D    + W ++   S +
Sbjct: 176  SEAADELSVGDLDSFYKAARVKFDADDAFRERAQRRVVALQRGDELTLRLWRLLVAESEK 235

Query: 730  DFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL-ELDDGRKI----MWGEDR 781
             F  +YD+L V LTE   RGES+Y + +  +   L++ GLL E  D   +      G D 
Sbjct: 236  YFLTVYDQLGVLLTERDFRGESYYNEQLAPVTDELDRLGLLRESGDAACVFPAGFVGRDG 295

Query: 782  GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGI 841
              +P+ + K DGGF Y  +DLAAIR R ++  A  ++YV  L Q  HF L+   A +AG 
Sbjct: 296  QPLPIIVRKRDGGFGYGATDLAAIRHRTQDLGATRLLYVVGLPQRQHFELVYAVAWQAGW 355

Query: 842  LNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTP 901
            L+P   R + +GFG +LG D K  ++R+GD++KL  LL+E + R+ +  + KN   +L+ 
Sbjct: 356  LSP-PARAEHLGFGSILGSDGKMLRSRTGDSIKLVGLLEEAVTRAAELARQKN--PDLSA 412

Query: 902  TELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTA 961
            TE+++  +AV  G IKYADLS +RN DYVF + +ML   GNTA YL YA+ RI SI R A
Sbjct: 413  TEVADVARAVGIGAIKYADLSTDRNKDYVFDWQRMLSLDGNTAPYLQYAHARIRSIFRRA 472

Query: 962  GINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAF 1021
             I           TP+++ H  E ALA  L     V+  V + L  H L  YL+ ++T F
Sbjct: 473  EIEQ------FTPTPITVGHPAEHALALELAGFGAVVASVEQTLQFHRLAGYLHTLATTF 526

Query: 1022 SEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            S FY++C  +  +       V   RL L + TA+V+++   +L I T
Sbjct: 527  SGFYEHCPVLRAE-----DAVRDSRLALCDLTARVLRQGLYLLGIAT 568



 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/355 (37%), Positives = 195/355 (54%), Gaps = 31/355 (8%)

Query: 106 LGDKTASVASTNEKYV---HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSE 162
           LG   A+VA      V    +  D+QC+ A++L +        + P DIA        +E
Sbjct: 11  LGPAFAAVAGAPVDPVLRRSQHADYQCDAALSLARRLG-----RRPRDIA--------AE 57

Query: 163 LATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVD 219
           +     LA +   + V+ PGF+N+ ++    G  +    V+   GV P    +   V+VD
Sbjct: 58  VLGQVELADLCSAVAVSGPGFINLTVADSALGTLLSTAAVDSRLGVAPSAATET--VIVD 115

Query: 220 FSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP 279
           +SSPN+AKEMHVGHLR T+IGD   RLLE+ GH V++ NH+GDWGT FGMLI HL D   
Sbjct: 116 YSSPNVAKEMHVGHLRGTVIGDAAVRLLEWRGHQVIKANHLGDWGTPFGMLIEHLLDLGE 175

Query: 280 DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRR 339
                   + DL +FYK ++ +FD D+ F++RA + VVALQR D    + W ++   S +
Sbjct: 176 SEAADELSVGDLDSFYKAARVKFDADDAFRERAQRRVVALQRGDELTLRLWRLLVAESEK 235

Query: 340 DFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL-ELDDGRKI----MWGEDR 391
            F  +YD+L V LTE   RGES+Y + +  +   L++ GLL E  D   +      G D 
Sbjct: 236 YFLTVYDQLGVLLTERDFRGESYYNEQLAPVTDELDRLGLLRESGDAACVFPAGFVGRDG 295

Query: 392 GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HRSYHQVLQAIA 444
             +P+ + K DGGF Y  +DLAAIR R ++  A  ++YV     R + +++ A+A
Sbjct: 296 QPLPIIVRKRDGGFGYGATDLAAIRHRTQDLGATRLLYVVGLPQRQHFELVYAVA 350



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 187/339 (55%), Gaps = 29/339 (8%)

Query: 1123 LGDKTASVASTNEKYV---HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSE 1179
            LG   A+VA      V    +  D+QC+ A++L +        + P DIA        +E
Sbjct: 11   LGPAFAAVAGAPVDPVLRRSQHADYQCDAALSLARRLG-----RRPRDIA--------AE 57

Query: 1180 LATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVD 1236
            +     LA +   + V+ PGF+N+ ++    G  +    V+   GV P    +   V+VD
Sbjct: 58   VLGQVELADLCSAVAVSGPGFINLTVADSALGTLLSTAAVDSRLGVAPSAATET--VIVD 115

Query: 1237 FSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFP 1296
            +SSPN+AKEMHVGHLR T+IGD   RLLE+ GH V++ NH+GDWGT FGMLI HL D   
Sbjct: 116  YSSPNVAKEMHVGHLRGTVIGDAAVRLLEWRGHQVIKANHLGDWGTPFGMLIEHLLDLGE 175

Query: 1297 DYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRR 1356
                    + DL +FYK ++ +FD D+ F++RA + VVALQR D    + W ++   S +
Sbjct: 176  SEAADELSVGDLDSFYKAARVKFDADDAFRERAQRRVVALQRGDELTLRLWRLLVAESEK 235

Query: 1357 DFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL-ELDDGRKI----MWGEDR 1408
             F  +YD+L V LTE   RGES+Y + +  +   L++ GLL E  D   +      G D 
Sbjct: 236  YFLTVYDQLGVLLTERDFRGESYYNEQLAPVTDELDRLGLLRESGDAACVFPAGFVGRDG 295

Query: 1409 GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
              +P+ + K DGGF Y  +DLAAIR R ++  A  ++YV
Sbjct: 296  QPLPIIVRKRDGGFGYGATDLAAIRHRTQDLGATRLLYV 334


>gi|329119396|ref|ZP_08248082.1| arginine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464541|gb|EGF10840.1| arginine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 572

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 232/568 (40%), Positives = 326/568 (57%), Gaps = 51/568 (8%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGD+Q N  M   K       K+NP ++AQ +A      LA N     VI+  +VA PGF
Sbjct: 35   FGDYQINGVMGAAK-----QAKQNPRELAQKVADA----LAGNA----VIESAQVAGPGF 81

Query: 574  VNVFLSRVYAGEQIKDIIVN---GVQ----PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            +N+ L   +  E ++  + +   GV     P T      V++D+SSPN+AKEMHVGHLRS
Sbjct: 82   INLRLRPDFLAEHVQTALNDPRCGVAKKDTPQT------VVIDYSSPNLAKEMHVGHLRS 135

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 686
            +IIGD+ISR+LE+ G  V+R NHVGDWGTQFGML+A++ ++  D    +  ++DL+ FY+
Sbjct: 136  SIIGDSISRVLEFAGDTVIRQNHVGDWGTQFGMLVAYMVEQQKD--NAAFELSDLEQFYR 193

Query: 687  ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 744
             +K RFDED  F   A + VV LQ  D +  K W+   ++S    Q +YD L + LT   
Sbjct: 194  AAKVRFDEDAAFADTAREYVVKLQGGDENVLKLWQQFVEISLGHAQAVYDTLGLKLTPAD 253

Query: 745  -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYD 798
              GES Y   ++  V  L ++GL   DDG K+++ ++     G     IV K  GGF Y 
Sbjct: 254  VAGESKYNPELQNTVDDLVRQGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYA 313

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            ++DLA +R R+    AD ++YV D  Q +HF  L   ++KAG L P+  + +FVGFG ++
Sbjct: 314  STDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFATSRKAGYL-PDSVKAEFVGFGTMM 372

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D + FKTRSGDTVKL +LLDE + R+   +K+KN   +L   + ++  Q V  G +KY
Sbjct: 373  GKDGRPFKTRSGDTVKLVDLLDEAVERAAALVKEKN--PDLGADDAAKIAQTVGIGAVKY 430

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNTA YL YAYTR+ S+ R A    E+   AA    + 
Sbjct: 431  ADLSKNRTSDYIFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKA----EEWDAAAD---LV 483

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L    E  LA  LL+  DVL         H+L  YLY ++T FS FY+ C  ++  AEG 
Sbjct: 484  LTEPAEKQLALELLKFEDVLQSAADTGYPHYLAAYLYQLATLFSRFYEACPILK--AEG- 540

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNI 1066
              T    RL LA  T  ++K+  ++L I
Sbjct: 541  --TARNSRLQLARLTGNILKQGLELLGI 566



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/423 (36%), Positives = 220/423 (52%), Gaps = 47/423 (11%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGD+Q N  M   K       K+NP ++AQ +A      LA N     VI+  +VA PGF
Sbjct: 35  FGDYQINGVMGAAK-----QAKQNPRELAQKVADA----LAGNA----VIESAQVAGPGF 81

Query: 184 VNVFLSRVYAGEQIKDIIVN---GVQ----PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           +N+ L   +  E ++  + +   GV     P T      V++D+SSPN+AKEMHVGHLRS
Sbjct: 82  INLRLRPDFLAEHVQTALNDPRCGVAKKDTPQT------VVIDYSSPNLAKEMHVGHLRS 135

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 296
           +IIGD+ISR+LE+ G  V+R NHVGDWGTQFGML+A++ ++  D    +  ++DL+ FY+
Sbjct: 136 SIIGDSISRVLEFAGDTVIRQNHVGDWGTQFGMLVAYMVEQQKD--NAAFELSDLEQFYR 193

Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 354
            +K RFDED  F   A + VV LQ  D +  K W+   ++S    Q +YD L + LT   
Sbjct: 194 AAKVRFDEDAAFADTAREYVVKLQGGDENVLKLWQQFVEISLGHAQAVYDTLGLKLTPAD 253

Query: 355 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYD 408
             GES Y   ++  V  L ++GL   DDG K+++ ++     G     IV K  GGF Y 
Sbjct: 254 VAGESKYNPELQNTVDDLVRQGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYA 313

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMN 468
           ++DLA +R R+    AD ++YV DHR      Q  A   K   +  S  ++  G    M 
Sbjct: 314 STDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFATSRKAGYLPDSVKAEFVGFGTMMG 373

Query: 469 V---PVRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDF 517
               P + R      L D+   AV+ A        P+LG D  A +A T      K+ D 
Sbjct: 374 KDGRPFKTRSGDTVKLVDLLDEAVERAAALVKEKNPDLGADDAAKIAQTVGIGAVKYADL 433

Query: 518 QCN 520
             N
Sbjct: 434 SKN 436



 Score =  216 bits (551), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 188/326 (57%), Gaps = 36/326 (11%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGD+Q N  M   K       K+NP ++AQ +A      LA N     VI+  +VA PGF
Sbjct: 35   FGDYQINGVMGAAK-----QAKQNPRELAQKVADA----LAGNA----VIESAQVAGPGF 81

Query: 1201 VNVFLSRVYAGEQIKDIIVN---GVQ----PPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            +N+ L   +  E ++  + +   GV     P T      V++D+SSPN+AKEMHVGHLRS
Sbjct: 82   INLRLRPDFLAEHVQTALNDPRCGVAKKDTPQT------VVIDYSSPNLAKEMHVGHLRS 135

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYK 1313
            +IIGD+ISR+LE+ G  V+R NHVGDWGTQFGML+A++ ++  D    +  ++DL+ FY+
Sbjct: 136  SIIGDSISRVLEFAGDTVIRQNHVGDWGTQFGMLVAYMVEQQKD--NAAFELSDLEQFYR 193

Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-- 1371
             +K RFDED  F   A + VV LQ  D +  K W+   ++S    Q +YD L + LT   
Sbjct: 194  AAKVRFDEDAAFADTAREYVVKLQGGDENVLKLWQQFVEISLGHAQAVYDTLGLKLTPAD 253

Query: 1372 -RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYD 1425
              GES Y   ++  V  L ++GL   DDG K+++ ++     G     IV K  GGF Y 
Sbjct: 254  VAGESKYNPELQNTVDDLVRQGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYA 313

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHR 1451
            ++DLA +R R+    AD ++YV DHR
Sbjct: 314  STDLACLRYRVGTLHADRLLYVVDHR 339


>gi|350426049|ref|XP_003494317.1| PREDICTED: arginyl-tRNA synthetase-like [Bombus impatiens]
          Length = 564

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 226/571 (39%), Positives = 325/571 (56%), Gaps = 46/571 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA  K        K P ++A+ +          +  L  ++DK+E+A PG
Sbjct: 21   QFGDYQANGIMAAAKKMG-----KAPRELAEHVLQ--------HLDLNGIVDKVEIAGPG 67

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GV----QPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 625
            F+N+FL+  +  +Q +  + +   G+     P T      ++VD+S+PN+AKEMHVGHLR
Sbjct: 68   FINLFLAPSWLTQQAQVALSDEKLGIAMTSHPQT------IVVDYSAPNVAKEMHVGHLR 121

Query: 626  STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 685
            STIIGD   R L +LGH V+R NHVGDWGTQFGMLIA+L+    ++ T    + DL+ FY
Sbjct: 122  STIIGDATVRTLTFLGHHVIRANHVGDWGTQFGMLIAYLEKMQNEHATDM-QLVDLELFY 180

Query: 686  KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL--- 742
            +E+KK +D+D +F ++A   VV LQ  D      W  + D++       Y RLNVTL   
Sbjct: 181  REAKKHYDDDPVFAEKARNYVVKLQGGDEYCAAMWRKLVDITMTQNIATYRRLNVTLDVS 240

Query: 743  TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 797
               GES Y   + Q+V  L++KGL    +G  +++      +D   + + I K DGG+ Y
Sbjct: 241  DTMGESTYNAMLPQVVADLKQKGLAVESEGAIVVYLNEFKNKDGDPMGVIIQKRDGGYLY 300

Query: 798  DTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
             T+D+A    R ++  AD I+Y TD  Q  H   +    K+AG L P    ++   FG++
Sbjct: 301  ATTDIACALYRYQQLHADRILYYTDSRQHQHLEQVWAIVKRAGYL-PETMPLEHHMFGMM 359

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIK 917
            LG+D K FKTRSGDTVKL++LLDE + R+   ++ KN    ++ +EL     AVA G +K
Sbjct: 360  LGKDGKPFKTRSGDTVKLNDLLDEAMVRAAALIRSKN--PAISQSELETIVDAVAIGAVK 417

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
            YADLS NR  DYVF +D ML   GNTA YL YAYTR+ SI + A  + E      Q    
Sbjct: 418  YADLSKNRTTDYVFDWDNMLAFEGNTAPYLQYAYTRVLSIFKKANSDLEQ----TQDGEF 473

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1037
             L  +KE AL   LL+  + +  V ++   H LC YLYDI+T FS FY+NC  +  + E 
Sbjct: 474  HLTDDKERALVVRLLQFEEAVQTVAKEGLPHVLCGYLYDIATLFSSFYENCPILTAENEA 533

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             +++    RL LA  TA+ ++   D+L I+T
Sbjct: 534  LMQS----RLKLAALTARTLQVGLDMLGIKT 560



 Score =  216 bits (549), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 193/344 (56%), Gaps = 36/344 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA  K        K P ++A+ +          +  L  ++DK+E+A PG
Sbjct: 21  QFGDYQANGIMAAAKKMG-----KAPRELAEHVLQ--------HLDLNGIVDKVEIAGPG 67

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GV----QPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 235
           F+N+FL+  +  +Q +  + +   G+     P T      ++VD+S+PN+AKEMHVGHLR
Sbjct: 68  FINLFLAPSWLTQQAQVALSDEKLGIAMTSHPQT------IVVDYSAPNVAKEMHVGHLR 121

Query: 236 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 295
           STIIGD   R L +LGH V+R NHVGDWGTQFGMLIA+L+    ++ T    + DL+ FY
Sbjct: 122 STIIGDATVRTLTFLGHHVIRANHVGDWGTQFGMLIAYLEKMQNEHATDM-QLVDLELFY 180

Query: 296 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL--- 352
           +E+KK +D+D +F ++A   VV LQ  D      W  + D++       Y RLNVTL   
Sbjct: 181 REAKKHYDDDPVFAEKARNYVVKLQGGDEYCAAMWRKLVDITMTQNIATYRRLNVTLDVS 240

Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 407
              GES Y   + Q+V  L++KGL    +G  +++      +D   + + I K DGG+ Y
Sbjct: 241 DTMGESTYNAMLPQVVADLKQKGLAVESEGAIVVYLNEFKNKDGDPMGVIIQKRDGGYLY 300

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQG 451
            T+D+A    R ++  AD I+Y TD R  HQ L+ +    K+ G
Sbjct: 301 ATTDIACALYRYQQLHADRILYYTDSRQ-HQHLEQVWAIVKRAG 343



 Score =  214 bits (545), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 188/334 (56%), Gaps = 35/334 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA  K        K P ++A+ +          +  L  ++DK+E+A PG
Sbjct: 21   QFGDYQANGIMAAAKKMG-----KAPRELAEHVLQ--------HLDLNGIVDKVEIAGPG 67

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GV----QPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 1252
            F+N+FL+  +  +Q +  + +   G+     P T      ++VD+S+PN+AKEMHVGHLR
Sbjct: 68   FINLFLAPSWLTQQAQVALSDEKLGIAMTSHPQT------IVVDYSAPNVAKEMHVGHLR 121

Query: 1253 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 1312
            STIIGD   R L +LGH V+R NHVGDWGTQFGMLIA+L+    ++ T    + DL+ FY
Sbjct: 122  STIIGDATVRTLTFLGHHVIRANHVGDWGTQFGMLIAYLEKMQNEHATDM-QLVDLELFY 180

Query: 1313 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL--- 1369
            +E+KK +D+D +F ++A   VV LQ  D      W  + D++       Y RLNVTL   
Sbjct: 181  REAKKHYDDDPVFAEKARNYVVKLQGGDEYCAAMWRKLVDITMTQNIATYRRLNVTLDVS 240

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 1424
               GES Y   + Q+V  L++KGL    +G  +++      +D   + + I K DGG+ Y
Sbjct: 241  DTMGESTYNAMLPQVVADLKQKGLAVESEGAIVVYLNEFKNKDGDPMGVIIQKRDGGYLY 300

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             T+D+A    R ++  AD I+Y TD R +  + Q
Sbjct: 301  ATTDIACALYRYQQLHADRILYYTDSRQHQHLEQ 334


>gi|385323859|ref|YP_005878298.1| arginyl-tRNA synthetase (arginine--tRNA ligase; ArgRS) [Neisseria
            meningitidis 8013]
 gi|421556876|ref|ZP_16002786.1| arginine--tRNA ligase [Neisseria meningitidis 80179]
 gi|261392246|emb|CAX49766.1| arginyl-tRNA synthetase (arginine--tRNA ligase; ArgRS) [Neisseria
            meningitidis 8013]
 gi|402336130|gb|EJU71392.1| arginine--tRNA ligase [Neisseria meningitidis 80179]
          Length = 572

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/563 (41%), Positives = 317/563 (56%), Gaps = 43/563 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 803
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
             +R R+    AD ++YV D  Q +HF  L   ++KAG L P      FVGFG ++G+D K
Sbjct: 319  CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYL-PENVGAAFVGFGTMMGKDGK 377

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G IKYADLS 
Sbjct: 378  PFKTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGSIKYADLSK 435

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    +        P  L    
Sbjct: 436  NRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDAN-------APTVLTEPL 488

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  LL+  +VL  V      H+L  YLY I+T FS FY+ C  ++ ++  +     
Sbjct: 489  EKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILKAESASR----- 543

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA+ T   +K+  D+L I
Sbjct: 544  NSRLQLAKLTGDTLKQGLDLLGI 566



 Score =  223 bits (567), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 155/418 (37%), Positives = 216/418 (51%), Gaps = 39/418 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83  NLRLRPEFLAQNIHAALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
           +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141 SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199 FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 413
            Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259 KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVP 470
            +R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P
Sbjct: 319 CLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKP 378

Query: 471 VRDRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            + R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 379 FKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKN 436



 Score =  216 bits (551), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 185/321 (57%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N+ L   +  + I   + +   GV     +K   V++D+SSPN+AKEMHVGHLRS+IIGD
Sbjct: 83   NLRLRPEFLAQNIHAALNDARFGV--AKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
            +ISR+ E++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K R
Sbjct: 141  SISRVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVR 198

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FDED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES
Sbjct: 199  FDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGES 258

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLA 1430
             Y   ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA
Sbjct: 259  KYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLA 318

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
             +R R+    AD ++YV DHR
Sbjct: 319  CLRYRVGTLHADRLLYVVDHR 339


>gi|421505366|ref|ZP_15952304.1| arginyl-tRNA ligase [Pseudomonas mendocina DLHK]
 gi|400343775|gb|EJO92147.1| arginyl-tRNA ligase [Pseudomonas mendocina DLHK]
          Length = 579

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/604 (38%), Positives = 327/604 (54%), Gaps = 68/604 (11%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            DR++    L    T A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14   DRLTADGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAKPAGVK 58

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
                 P D+A+ + + + ++          I K+E+A PGF+N F        Q  D + 
Sbjct: 59   -----PRDLAEKLIAALPADAG--------IAKVEIAGPGFLNFF--------QNSDALA 97

Query: 593  NGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 643
              ++    + KL         RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  
Sbjct: 98   QRLEAALADAKLGVHKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDT 157

Query: 644  VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 703
            V+R NHVGDWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA 
Sbjct: 158  VIRQNHVGDWGTQFGMLLAYMQE---NPAAAESELADLEGFYRAAKKRFDESPEFADRAR 214

Query: 704  QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPY 760
            + VV LQ  D +  + W    D+S    Q +YDRL V L+    +GES Y   + Q+V  
Sbjct: 215  ELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYNDDLPQVVAD 274

Query: 761  LEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 815
            L  KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD
Sbjct: 275  LAAKGLLTEDNGAQCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRAGVLKAD 334

Query: 816  WIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKL 875
             ++Y  D  Q +HF+++  CA+ AG + P    ++ +GFG + G D + FKTR G TVKL
Sbjct: 335  RVLYFVDQRQALHFQMVFACARLAGFV-PASMELEHMGFGTMNGPDGRPFKTRDGGTVKL 393

Query: 876  SELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDK 935
             +LLDE  +R+ + +K KN   EL   EL    + V    +KYADLS +R  DY F+FD 
Sbjct: 394  VQLLDEAEQRAYELVKSKN--PELAEDELRRIARVVGIASVKYADLSKHRASDYSFNFDL 451

Query: 936  MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMN 995
            ML   GNTA YLLYAYTR+A + R  G   +++        ++L  E+E ALA  L +  
Sbjct: 452  MLSFEGNTAPYLLYAYTRVAGVFRKLGKGIDEI-----GGQIALVAEQEQALAAKLAQFG 506

Query: 996  DVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAK 1055
            ++L  V      H LC YLYD++  FS FY+NC  +  + E         RL L   T +
Sbjct: 507  ELLASVADKGTPHMLCSYLYDLAGLFSSFYENCPILAAEDE----ATRDSRLRLTALTGR 562

Query: 1056 VMKK 1059
             +K+
Sbjct: 563  TLKQ 566



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/369 (37%), Positives = 197/369 (53%), Gaps = 56/369 (15%)

Query: 83  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           DR++    L    T A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14  DRLTADGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAKPAGVK 58

Query: 143 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
                P D+A+ + + + ++          I K+E+A PGF+N F        Q  D + 
Sbjct: 59  -----PRDLAEKLIAALPADAG--------IAKVEIAGPGFLNFF--------QNSDALA 97

Query: 203 NGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 253
             ++    + KL         RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  
Sbjct: 98  QRLEAALADAKLGVHKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDT 157

Query: 254 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 313
           V+R NHVGDWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA 
Sbjct: 158 VIRQNHVGDWGTQFGMLLAYMQE---NPAAAESELADLEGFYRAAKKRFDESPEFADRAR 214

Query: 314 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPY 370
           + VV LQ  D +  + W    D+S    Q +YDRL V L+    +GES Y   + Q+V  
Sbjct: 215 ELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYNDDLPQVVAD 274

Query: 371 LEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 425
           L  KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD
Sbjct: 275 LAAKGLLTEDNGAQCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRAGVLKAD 334

Query: 426 WIVYVTDHR 434
            ++Y  D R
Sbjct: 335 RVLYFVDQR 343



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/369 (37%), Positives = 197/369 (53%), Gaps = 56/369 (15%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            DR++    L    T A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14   DRLTADGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAKPAGVK 58

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
                 P D+A+ + + + ++          I K+E+A PGF+N F        Q  D + 
Sbjct: 59   -----PRDLAEKLIAALPADAG--------IAKVEIAGPGFLNFF--------QNSDALA 97

Query: 1220 NGVQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 1270
              ++    + KL         RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  
Sbjct: 98   QRLEAALADAKLGVHKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDT 157

Query: 1271 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 1330
            V+R NHVGDWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA 
Sbjct: 158  VIRQNHVGDWGTQFGMLLAYMQE---NPAAAESELADLEGFYRAAKKRFDESPEFADRAR 214

Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPY 1387
            + VV LQ  D +  + W    D+S    Q +YDRL V L+    +GES Y   + Q+V  
Sbjct: 215  ELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYNDDLPQVVAD 274

Query: 1388 LEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKAD 1442
            L  KGLL  D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD
Sbjct: 275  LAAKGLLTEDNGAQCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRAGVLKAD 334

Query: 1443 WIVYVTDHR 1451
             ++Y  D R
Sbjct: 335  RVLYFVDQR 343


>gi|423198719|ref|ZP_17185302.1| arginine-tRNA ligase [Aeromonas hydrophila SSU]
 gi|404629909|gb|EKB26634.1| arginine-tRNA ligase [Aeromonas hydrophila SSU]
          Length = 581

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/565 (39%), Positives = 322/565 (56%), Gaps = 39/565 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVEAMVTSANANVKLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 694
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELRDLEAFYTQAKRHYDE 206

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 751
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNVSLTNKDIMGESMYN 266

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 803
              + ++V  L+ +GL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPEIVADLKARGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
              + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D +
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYV-PESVPLEHHAFGMMLGKDGR 382

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             +KTRSG TVKL +LL+E   R+   L+ +N  ++L+  E ++   A+A G +KYADLS 
Sbjct: 383  PYKTRSGGTVKLVDLLNEAEERAAALLESRN--SDLSAEEKAQVVHAIAMGAVKYADLSK 440

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DY+F +D ML   GNTA YL YAYTRI SI R AG++++ L     S  V L  E 
Sbjct: 441  NRTTDYIFDWDLMLSFEGNTAPYLQYAYTRIQSIFRKAGVDADTL-----SGHVILNEEA 495

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA+ L++ +D +  V      H LC YLY++S  F  FY+ C  I KD  G  +   
Sbjct: 496  EETLAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFYEAC-PINKD--GVDEATR 552

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RLLL  ATAKV+K    +L I T
Sbjct: 553  QSRLLLCAATAKVLKLGLGVLGIHT 577



 Score =  226 bits (576), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/329 (38%), Positives = 189/329 (57%), Gaps = 28/329 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88  NFFFDPSWLAGQVEAMVTSANANVKLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148 RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELRDLEAFYTQAKRHYDE 206

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 361
           DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLNV+LT +   GES Y 
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNVSLTNKDIMGESMYN 266

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 413
             + ++V  L+ +GL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267 DMLPEIVADLKARGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
             + R E   AD ++Y  D R +  ++QA
Sbjct: 324 CAKYRYETLGADRVMYFIDSRQHQHLMQA 352



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 188/328 (57%), Gaps = 28/328 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVEAMVTSANANVKLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELRDLEAFYTQAKRHYDE 206

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 1378
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNVSLTNKDIMGESMYN 266

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
              + ++V  L+ +GL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPEIVADLKARGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 1431 AIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
              + R E   AD ++Y  D R +  ++Q
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQ 351


>gi|262166185|ref|ZP_06033922.1| arginyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025901|gb|EEY44569.1| arginyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 597

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 323/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 221

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PEQVSLEHHAFGMMLGKDGRP 400

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   +L+  E ++    VA   +KYADLS +
Sbjct: 401  FKTRAGGTVRLADLLDEAEERAKALIESKN--PDLSADEKAKIANTVAMAAVKYADLSKH 458

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 459  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 513

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 514  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SVKQ 569

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 570  SRLKLAALTAKTIKQGLALLGIET 593



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 191/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102 FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 162 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 221

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282 YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 342 AKYRYETLGADRVLYFIDSRQHQHLMQA 369



 Score =  233 bits (595), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 190/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKKLY 221

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQ 368


>gi|375335642|ref|ZP_09776986.1| arginyl-tRNA synthetase [Succinivibrionaceae bacterium WG-1]
          Length = 578

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/568 (39%), Positives = 328/568 (57%), Gaps = 52/568 (9%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K     G K+ P +IA+    ++ + L+T+      I KIE+A PGF+
Sbjct: 41   GDFATNIAMLLAK-----GMKRKPIEIAE----LIVNSLSTDDK----ISKIEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N F++  +    I +++ +       NKKL  V+VD+SSPN+AKEM V H+RST+IGD +
Sbjct: 88   NFFVNSDFLSNAINELVTDPKLGVKSNKKLETVVVDYSSPNVAKEMAVHHIRSTVIGDAV 147

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ----DKFPDYLTKSPPIADLQAFYKESK 689
             R LE+LG+ V+R NH+GDWGTQFGMLIA L+    ++  D+      ++DL+AFY+E+K
Sbjct: 148  VRTLEFLGNKVIRANHIGDWGTQFGMLIAFLEKQEKEQHNDF-----DLSDLEAFYREAK 202

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
              +D DE+F ++A   VV LQ  D   +  W+ +  ++    Q IY+RLN+TLT++   G
Sbjct: 203  VCYDNDEVFAEKARNYVVKLQSGDEYCRTMWKKLVQITMTQNQDIYNRLNITLTDKDIMG 262

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 798
            ES Y   +  L+  L++K L   DDG  +++        G  RG+I   + K DGGF Y 
Sbjct: 263  ESLYNSMLAPLIEDLKQKNLAVKDDGAMVVYLDSFKDKDGNPRGAI---VQKRDGGFLYT 319

Query: 799  TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
            T+D+A ++ R E+  A  I+Y  D  Q  H  +  + AK AG + P+   ++   FG++L
Sbjct: 320  TTDVACVKYRCEKLGAQRIIYFADSRQHEHLLMSWDIAKLAGYV-PDGVSLEHASFGMML 378

Query: 859  GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKY 918
            G+D K FKTRSG TVKL +LL+E + R+   L +K+  ++LTP E     QAVA G +KY
Sbjct: 379  GKDGKPFKTRSGGTVKLKDLLNEAVARATTLLSEKS--SDLTPKEKENVIQAVAMGAVKY 436

Query: 919  ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
            ADLS NR  DY+F +D ML   GNT+ YL YAY+RI +I R         +  A+   V 
Sbjct: 437  ADLSKNRTTDYIFDWDNMLTFEGNTSPYLQYAYSRIQAIFR---------KTDAKVGKVK 487

Query: 979  LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
            L  E E  LA+ +++ N+ +  V      H LC YLY ++  F +FY+ C  I KD  G 
Sbjct: 488  LVEEAEKNLAQHIVKFNETVNQVAEKSMPHLLCAYLYQLAVLFMKFYEAC-PINKD--GV 544

Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNI 1066
               +   RL L + TA V+K    +L I
Sbjct: 545  ELEIRESRLALCQVTANVLKTGLSLLGI 572



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 198/334 (59%), Gaps = 37/334 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K     G K+ P +IA+    ++ + L+T+      I KIE+A PGF+
Sbjct: 41  GDFATNIAMLLAK-----GMKRKPIEIAE----LIVNSLSTDDK----ISKIEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N F++  +    I +++ +       NKKL  V+VD+SSPN+AKEM V H+RST+IGD +
Sbjct: 88  NFFVNSDFLSNAINELVTDPKLGVKSNKKLETVVVDYSSPNVAKEMAVHHIRSTVIGDAV 147

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ----DKFPDYLTKSPPIADLQAFYKESK 299
            R LE+LG+ V+R NH+GDWGTQFGMLIA L+    ++  D+      ++DL+AFY+E+K
Sbjct: 148 VRTLEFLGNKVIRANHIGDWGTQFGMLIAFLEKQEKEQHNDF-----DLSDLEAFYREAK 202

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
             +D DE+F ++A   VV LQ  D   +  W+ +  ++    Q IY+RLN+TLT++   G
Sbjct: 203 VCYDNDEVFAEKARNYVVKLQSGDEYCRTMWKKLVQITMTQNQDIYNRLNITLTDKDIMG 262

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 408
           ES Y   +  L+  L++K L   DDG  +++        G  RG+I   + K DGGF Y 
Sbjct: 263 ESLYNSMLAPLIEDLKQKNLAVKDDGAMVVYLDSFKDKDGNPRGAI---VQKRDGGFLYT 319

Query: 409 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           T+D+A ++ R E+  A  I+Y  D R +  +L +
Sbjct: 320 TTDVACVKYRCEKLGAQRIIYFADSRQHEHLLMS 353



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 197/332 (59%), Gaps = 37/332 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K     G K+ P +IA+    ++ + L+T+      I KIE+A PGF+
Sbjct: 41   GDFATNIAMLLAK-----GMKRKPIEIAE----LIVNSLSTDDK----ISKIEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N F++  +    I +++ +       NKKL  V+VD+SSPN+AKEM V H+RST+IGD +
Sbjct: 88   NFFVNSDFLSNAINELVTDPKLGVKSNKKLETVVVDYSSPNVAKEMAVHHIRSTVIGDAV 147

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQ----DKFPDYLTKSPPIADLQAFYKESK 1316
             R LE+LG+ V+R NH+GDWGTQFGMLIA L+    ++  D+      ++DL+AFY+E+K
Sbjct: 148  VRTLEFLGNKVIRANHIGDWGTQFGMLIAFLEKQEKEQHNDF-----DLSDLEAFYREAK 202

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
              +D DE+F ++A   VV LQ  D   +  W+ +  ++    Q IY+RLN+TLT++   G
Sbjct: 203  VCYDNDEVFAEKARNYVVKLQSGDEYCRTMWKKLVQITMTQNQDIYNRLNITLTDKDIMG 262

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYD 1425
            ES Y   +  L+  L++K L   DDG  +++        G  RG+I   + K DGGF Y 
Sbjct: 263  ESLYNSMLAPLIEDLKQKNLAVKDDGAMVVYLDSFKDKDGNPRGAI---VQKRDGGFLYT 319

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTDHRSYHQVL 1457
            T+D+A ++ R E+  A  I+Y  D R +  +L
Sbjct: 320  TTDVACVKYRCEKLGAQRIIYFADSRQHEHLL 351


>gi|407366933|ref|ZP_11113465.1| arginyl-tRNA ligase [Pseudomonas mandelii JR-1]
          Length = 578

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 239/599 (39%), Positives = 330/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVTKTEIAGPGFLNFFQNTDALATRLDAALADD 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG DV+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDDVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +KDKN   EL   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYTLVKDKN--PELAENELRNIARVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  +VL  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEVE-----GQIVLEAAHEHELAAKLAQFGEVLNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V      H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VCEKGTPHILCTYLYDVAGLFSSFYENCPILSADTPAQMQS----RLRLAALTGRTLKQ 565



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 162/439 (36%), Positives = 226/439 (51%), Gaps = 47/439 (10%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENVTKTEIAGPGFLNFFQNTDALATRLDAALADD 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG DV+R N
Sbjct: 108 HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDDVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKG-----TAKKMNVPVRDRMSVRDYLSDVF 485
            D R      Q  A   K   ++     +  G      A       RD  +V+  L D+ 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVK--LIDLL 396

Query: 486 THAVQVAFPELGDKTASVA 504
           T A + A+  + DK   +A
Sbjct: 397 TEAQERAYTLVKDKNPELA 415



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/364 (40%), Positives = 200/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVTKTEIAGPGFLNFFQNTDALATRLDAALADD 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG DV+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDDVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|419952431|ref|ZP_14468578.1| arginyl-tRNA ligase [Pseudomonas stutzeri TS44]
 gi|387970476|gb|EIK54754.1| arginyl-tRNA ligase [Pseudomonas stutzeri TS44]
          Length = 579

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/573 (40%), Positives = 332/573 (57%), Gaps = 48/573 (8%)

Query: 500  TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 559
            T  V +T +K     GDF  N AM L K    K     P ++A+ +       +A  P  
Sbjct: 29   TIQVENTKDK---SHGDFASNIAMMLAKPAGLK-----PRELAEKL-------IAALPQD 73

Query: 560  AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL-----NKKLRVLVDFSSPN 614
            A+V  K+E+A PGF+N F +     E+++  + +    P L         RV++D SSPN
Sbjct: 74   AQV-SKVEIAGPGFLNFFQNTAALAERLEAALAD----PQLTVCKAGAAQRVVIDLSSPN 128

Query: 615  IAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK 674
            +AKEMHVGHLRSTIIGD ++R+L +LG DV+R NHVGDWGTQFGML+A+L+++ P     
Sbjct: 129  LAKEMHVGHLRSTIIGDAVARVLAFLGDDVIRQNHVGDWGTQFGMLLAYLEEQ-P--AAA 185

Query: 675  SPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKI 734
               +ADL+ FY+ +KKRFDE   F  RA + VV LQ  D +  + W+   DVS    Q +
Sbjct: 186  ESELADLEQFYRAAKKRFDESTGFADRARELVVRLQAGDTECLRLWQRFNDVSLSHCQAV 245

Query: 735  YDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPM 786
            YDRL V+L+    +GES Y   +  +V  L  KGLL  DDG + ++       +   +P+
Sbjct: 246  YDRLGVSLSPADVKGESAYNAELPGIVEALRAKGLLTEDDGAQCVFLDEFKNAEGNPLPV 305

Query: 787  TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNK 846
             + K+ GG+ Y T+DLAA+R R E   AD ++Y  D  Q +HF++  E A++AG ++ + 
Sbjct: 306  IVQKAGGGYLYATTDLAAMRYRSEVLHADRVLYFVDQRQALHFQMAFEVARRAGFVH-DG 364

Query: 847  TRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSE 906
             +++ +GFG + G D + FKTR G TVKL +LLDE  +R+   +K+KN   EL  +EL +
Sbjct: 365  MQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEQRAYSLVKEKN--PELDESELRQ 422

Query: 907  AQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSE 966
              +AV    +KYADLS +R  DY F+F+ ML   GNTA YLLYAYTR+AS+ R  G   +
Sbjct: 423  IARAVGISAVKYADLSKHRTSDYRFNFELMLSFEGNTAPYLLYAYTRVASVFRKLGKGID 482

Query: 967  DLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYD 1026
            +      +  + LE E+E ALA  L +  +VL  V      H LC YLYD++  FS FY+
Sbjct: 483  E-----TAGHIRLEAEQELALAARLAQFGEVLNNVAAKGEPHQLCSYLYDLAGLFSSFYE 537

Query: 1027 NCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            +C  +  D   +  +    RL LA  T K +K+
Sbjct: 538  HCPILGADQPEQKDS----RLRLAALTGKTLKQ 566



 Score =  221 bits (563), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 194/338 (57%), Gaps = 36/338 (10%)

Query: 110 TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 169
           T  V +T +K     GDF  N AM L K    K     P ++A+ +       +A  P  
Sbjct: 29  TIQVENTKDK---SHGDFASNIAMMLAKPAGLK-----PRELAEKL-------IAALPQD 73

Query: 170 AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL-----NKKLRVLVDFSSPN 224
           A+V  K+E+A PGF+N F +     E+++  + +    P L         RV++D SSPN
Sbjct: 74  AQV-SKVEIAGPGFLNFFQNTAALAERLEAALAD----PQLTVCKAGAAQRVVIDLSSPN 128

Query: 225 IAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK 284
           +AKEMHVGHLRSTIIGD ++R+L +LG DV+R NHVGDWGTQFGML+A+L+++ P     
Sbjct: 129 LAKEMHVGHLRSTIIGDAVARVLAFLGDDVIRQNHVGDWGTQFGMLLAYLEEQ-P--AAA 185

Query: 285 SPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKI 344
              +ADL+ FY+ +KKRFDE   F  RA + VV LQ  D +  + W+   DVS    Q +
Sbjct: 186 ESELADLEQFYRAAKKRFDESTGFADRARELVVRLQAGDTECLRLWQRFNDVSLSHCQAV 245

Query: 345 YDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPM 396
           YDRL V+L+    +GES Y   +  +V  L  KGLL  DDG + ++       +   +P+
Sbjct: 246 YDRLGVSLSPADVKGESAYNAELPGIVEALRAKGLLTEDDGAQCVFLDEFKNAEGNPLPV 305

Query: 397 TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 434
            + K+ GG+ Y T+DLAA+R R E   AD ++Y  D R
Sbjct: 306 IVQKAGGGYLYATTDLAAMRYRSEVLHADRVLYFVDQR 343



 Score =  221 bits (563), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 194/338 (57%), Gaps = 36/338 (10%)

Query: 1127 TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 1186
            T  V +T +K     GDF  N AM L K    K     P ++A+ +       +A  P  
Sbjct: 29   TIQVENTKDK---SHGDFASNIAMMLAKPAGLK-----PRELAEKL-------IAALPQD 73

Query: 1187 AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL-----NKKLRVLVDFSSPN 1241
            A+V  K+E+A PGF+N F +     E+++  + +    P L         RV++D SSPN
Sbjct: 74   AQV-SKVEIAGPGFLNFFQNTAALAERLEAALAD----PQLTVCKAGAAQRVVIDLSSPN 128

Query: 1242 IAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK 1301
            +AKEMHVGHLRSTIIGD ++R+L +LG DV+R NHVGDWGTQFGML+A+L+++ P     
Sbjct: 129  LAKEMHVGHLRSTIIGDAVARVLAFLGDDVIRQNHVGDWGTQFGMLLAYLEEQ-P--AAA 185

Query: 1302 SPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKI 1361
               +ADL+ FY+ +KKRFDE   F  RA + VV LQ  D +  + W+   DVS    Q +
Sbjct: 186  ESELADLEQFYRAAKKRFDESTGFADRARELVVRLQAGDTECLRLWQRFNDVSLSHCQAV 245

Query: 1362 YDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPM 1413
            YDRL V+L+    +GES Y   +  +V  L  KGLL  DDG + ++       +   +P+
Sbjct: 246  YDRLGVSLSPADVKGESAYNAELPGIVEALRAKGLLTEDDGAQCVFLDEFKNAEGNPLPV 305

Query: 1414 TIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             + K+ GG+ Y T+DLAA+R R E   AD ++Y  D R
Sbjct: 306  IVQKAGGGYLYATTDLAAMRYRSEVLHADRVLYFVDQR 343


>gi|421497309|ref|ZP_15944481.1| argS [Aeromonas media WS]
 gi|407183655|gb|EKE57540.1| argS [Aeromonas media WS]
          Length = 581

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 224/565 (39%), Positives = 321/565 (56%), Gaps = 39/565 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVEAMVTSANANVKLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 694
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELKDLEAFYTQAKRHYDE 206

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 751
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLN++L+ +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNISLSNKDIMGESMYN 266

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 803
              + Q+V  L+ KGL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPQIVADLKAKGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
              + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D +
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYV-PESVPLEHHAFGMMLGKDGR 382

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             +KTRSG TVKL +LL+E   R+   L+ +N  ++L+  E ++   A+A G +KYADLS 
Sbjct: 383  PYKTRSGGTVKLVDLLNEAEERAAALLESRN--SDLSAEEKAKVVHAIAMGAVKYADLSK 440

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DY+F +D ML   GNTA YL YAYTRI SI R   I++E L     +  V+L  E 
Sbjct: 441  NRTTDYIFDWDMMLSFEGNTAPYLQYAYTRIQSIFRKVNIDAEAL-----TGHVTLNEEA 495

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA+ L++ +D +  V      H LC YLY++S  F  FY+ C  I KD  G  +   
Sbjct: 496  EEVLAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFYEAC-PINKD--GVDEATR 552

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RLLL  ATAKV+K    +L I T
Sbjct: 553  NSRLLLCAATAKVLKLGLGVLGIYT 577



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/329 (38%), Positives = 189/329 (57%), Gaps = 28/329 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88  NFFFDPSWLAGQVEAMVTSANANVKLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148 RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELKDLEAFYTQAKRHYDE 206

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 361
           DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLN++L+ +   GES Y 
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNISLSNKDIMGESMYN 266

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 413
             + Q+V  L+ KGL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267 DMLPQIVADLKAKGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
             + R E   AD ++Y  D R +  ++QA
Sbjct: 324 CAKYRYETLGADRVMYFIDSRQHQHLMQA 352



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 188/328 (57%), Gaps = 28/328 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVEAMVTSANANVKLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELKDLEAFYTQAKRHYDE 206

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 1378
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLN++L+ +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNISLSNKDIMGESMYN 266

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
              + Q+V  L+ KGL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPQIVADLKAKGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 1431 AIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
              + R E   AD ++Y  D R +  ++Q
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQ 351


>gi|334706278|ref|ZP_08522144.1| arginyl-tRNA synthetase [Aeromonas caviae Ae398]
          Length = 581

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/562 (39%), Positives = 324/562 (57%), Gaps = 33/562 (5%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVEAMVTSDNANVKLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 694
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELKDLEAFYTQAKRHYDE 206

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 751
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLN++L+ +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNISLSNKDIMGESMYN 266

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIR 806
              + Q+V  L+ KGL    +G  +++ +   ++   PM ++  KSDGGF Y T+D+A  +
Sbjct: 267  DMLPQIVADLKAKGLAVESEGATVVFLDEFKNKDGEPMGVIIQKSDGGFLYTTTDIACAK 326

Query: 807  QRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFK 866
             R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + +K
Sbjct: 327  YRYENLGADRVMYFIDSRQHQHLMQAWTITRKAGYV-PESVPLEHHAFGMMLGKDGRPYK 385

Query: 867  TRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRN 926
            TRSG TVKL +LL+E   R+   L+ +N  ++L+  E ++   A+A G +KYADLS NR 
Sbjct: 386  TRSGGTVKLVDLLNEAEERASALLESRN--SDLSAEEKAQVVHAIAMGAVKYADLSKNRT 443

Query: 927  LDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFA 986
             DY+F +D ML   GNTA YL YAYTRI SI R AG++++ L     S  V L  + E  
Sbjct: 444  TDYIFDWDLMLSFEGNTAPYLQYAYTRIQSIFRKAGVDADTL-----SGKVVLSEDAEET 498

Query: 987  LAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGR 1046
            LA+ L++ +D +  V      H LC YLY++S  F  FY+ C  I KD  G  +     R
Sbjct: 499  LAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFYEAC-PINKD--GVDEATRQSR 555

Query: 1047 LLLAEATAKVMKKCFDILNIRT 1068
            LLL  ATAKV+K    +L I T
Sbjct: 556  LLLCAATAKVLKLGLGVLGIHT 577



 Score =  226 bits (577), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 191/326 (58%), Gaps = 22/326 (6%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88  NFFFDPSWLAGQVEAMVTSDNANVKLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148 RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELKDLEAFYTQAKRHYDE 206

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 361
           DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLN++L+ +   GES Y 
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNISLSNKDIMGESMYN 266

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIR 416
             + Q+V  L+ KGL    +G  +++ +   ++   PM ++  KSDGGF Y T+D+A  +
Sbjct: 267 DMLPQIVADLKAKGLAVESEGATVVFLDEFKNKDGEPMGVIIQKSDGGFLYTTTDIACAK 326

Query: 417 QRIEEEKADWIVYVTDHRSYHQVLQA 442
            R E   AD ++Y  D R +  ++QA
Sbjct: 327 YRYENLGADRVMYFIDSRQHQHLMQA 352



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 190/325 (58%), Gaps = 22/325 (6%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVEAMVTSDNANVKLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELKDLEAFYTQAKRHYDE 206

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 1378
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLN++L+ +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNISLSNKDIMGESMYN 266

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIR 1433
              + Q+V  L+ KGL    +G  +++ +   ++   PM ++  KSDGGF Y T+D+A  +
Sbjct: 267  DMLPQIVADLKAKGLAVESEGATVVFLDEFKNKDGEPMGVIIQKSDGGFLYTTTDIACAK 326

Query: 1434 QRIEEEKADWIVYVTDHRSYHQVLQ 1458
             R E   AD ++Y  D R +  ++Q
Sbjct: 327  YRYENLGADRVMYFIDSRQHQHLMQ 351


>gi|423204810|ref|ZP_17191366.1| arginine-tRNA ligase [Aeromonas veronii AMC34]
 gi|404625686|gb|EKB22501.1| arginine-tRNA ligase [Aeromonas veronii AMC34]
          Length = 581

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/562 (39%), Positives = 323/562 (57%), Gaps = 33/562 (5%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDQRWLAGQVEAMVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 694
            R LE+LGH V+R NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVIRANHIGDWGTQFGMLIAYLE-KMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 751
            DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 806
              + ++V  L+ KGL    +G  +++      +D  ++ + I KSDGGF Y T+D+A  +
Sbjct: 267  DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAK 326

Query: 807  QRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFK 866
             R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + +K
Sbjct: 327  YRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYV-PESVPLEHHAFGMMLGKDGRPYK 385

Query: 867  TRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRN 926
            TRSG TVKL +LL+E   R+   L+ +N  ++L+  E ++   A+A G +KYADLS NR 
Sbjct: 386  TRSGGTVKLVDLLNEAEERAAALLESRN--SDLSAEEKAQVVNAIAMGAVKYADLSKNRT 443

Query: 927  LDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFA 986
             DY+F +D ML   GNTA YL YAYTRI SI R AG+++  L     +  V+L  E E  
Sbjct: 444  TDYIFDWDLMLSFEGNTAPYLQYAYTRIQSIFRKAGVDAATL-----TGNVTLNEEAEEV 498

Query: 987  LAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGR 1046
            LA+ L++ +D +  V      H LC YLY++S  F  FY+ C  I KD  G  +     R
Sbjct: 499  LAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFYEAC-PINKD--GVDEATRQSR 555

Query: 1047 LLLAEATAKVMKKCFDILNIRT 1068
            LLL  ATAKV+K    +L I T
Sbjct: 556  LLLCAATAKVLKLGLGVLGIHT 577



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 190/326 (58%), Gaps = 22/326 (6%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88  NFFFDQRWLAGQVEAMVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           R LE+LGH V+R NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148 RALEFLGHKVIRANHIGDWGTQFGMLIAYLE-KMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 361
           DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 416
             + ++V  L+ KGL    +G  +++      +D  ++ + I KSDGGF Y T+D+A  +
Sbjct: 267 DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAK 326

Query: 417 QRIEEEKADWIVYVTDHRSYHQVLQA 442
            R E   AD ++Y  D R +  ++QA
Sbjct: 327 YRYETLGADRVMYFIDSRQHQHLMQA 352



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 189/325 (58%), Gaps = 22/325 (6%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDQRWLAGQVEAMVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            R LE+LGH V+R NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVIRANHIGDWGTQFGMLIAYLE-KMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 1378
            DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 1433
              + ++V  L+ KGL    +G  +++      +D  ++ + I KSDGGF Y T+D+A  +
Sbjct: 267  DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAK 326

Query: 1434 QRIEEEKADWIVYVTDHRSYHQVLQ 1458
             R E   AD ++Y  D R +  ++Q
Sbjct: 327  YRYETLGADRVMYFIDSRQHQHLMQ 351


>gi|146305572|ref|YP_001186037.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166232824|sp|A4XPN9.1|SYR_PSEMY RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|145573773|gb|ABP83305.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 579

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 227/596 (38%), Positives = 327/596 (54%), Gaps = 52/596 (8%)

Query: 473  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
            DR++    L    T A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14   DRLTADGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAKPAGMK 58

Query: 533  GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 592
                 P D+A+ + + + ++          I K+E+A PGF+N F +     ++++  + 
Sbjct: 59   -----PRDLAEKLIAALPADAG--------IAKVEIAGPGFLNFFQNSDALAQRLEAALA 105

Query: 593  NGVQPPTLNKKL-RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
            +       N    RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVG
Sbjct: 106  DAQLGVHKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVG 165

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA + VV LQ 
Sbjct: 166  DWGTQFGMLLAYMQE---NPAAAESELADLEGFYRAAKKRFDESPEFADRARELVVQLQA 222

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D +  + W    D+S    Q +YDRL V L+    +GES Y   + Q+V  L  KGLL 
Sbjct: 223  GDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYNDDLPQVVADLAAKGLLT 282

Query: 769  LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
             D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD ++Y  D 
Sbjct: 283  EDNGAQCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRAGVLKADRVLYFVDQ 342

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q +HF+++  CA+ AG + P    ++ +GFG + G D + FKTR G TVKL +LLDE  
Sbjct: 343  RQALHFQMVFACARLAGFV-PASMELEHMGFGTMNGPDGRPFKTRDGGTVKLVQLLDEAE 401

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
            +R+ + +K KN   EL   EL    + V    +KYADLS +R  DY F+FD ML   GNT
Sbjct: 402  QRAYELVKSKN--PELAEDELRRIARVVGIASVKYADLSKHRASDYSFNFDLMLSFEGNT 459

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A YLLYAYTR+A + R  G   +++        ++L  E+E ALA  L +  ++L  V  
Sbjct: 460  APYLLYAYTRVAGVFRKLGKGIDEI-----GGRIALVAEQEQALAAKLAQFGELLASVAD 514

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
                H LC YLYD++  FS FY+NC  +  + E         RL L   T + +K+
Sbjct: 515  KGTPHMLCSYLYDLAGLFSSFYENCPILAAEDE----ATRDSRLRLTALTGRTLKQ 566



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 136/361 (37%), Positives = 197/361 (54%), Gaps = 40/361 (11%)

Query: 83  DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
           DR++    L    T A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14  DRLTADGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAKPAGMK 58

Query: 143 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 202
                P D+A+ + + + ++          I K+E+A PGF+N F +     ++++  + 
Sbjct: 59  -----PRDLAEKLIAALPADAG--------IAKVEIAGPGFLNFFQNSDALAQRLEAALA 105

Query: 203 NGVQPPTLNKKL-RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
           +       N    RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVG
Sbjct: 106 DAQLGVHKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVG 165

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA + VV LQ 
Sbjct: 166 DWGTQFGMLLAYMQE---NPAAAESELADLEGFYRAAKKRFDESPEFADRARELVVQLQA 222

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D +  + W    D+S    Q +YDRL V L+    +GES Y   + Q+V  L  KGLL 
Sbjct: 223 GDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYNDDLPQVVADLAAKGLLT 282

Query: 379 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
            D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD ++Y  D 
Sbjct: 283 EDNGAQCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRAGVLKADRVLYFVDQ 342

Query: 434 R 434
           R
Sbjct: 343 R 343



 Score =  223 bits (569), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 136/361 (37%), Positives = 197/361 (54%), Gaps = 40/361 (11%)

Query: 1100 DRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
            DR++    L    T A+QV             +T +K     GDF  N AM L K    K
Sbjct: 14   DRLTADGVLPAGLTPAIQVE------------NTKDK---SHGDFASNIAMMLAKPAGMK 58

Query: 1160 GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV 1219
                 P D+A+ + + + ++          I K+E+A PGF+N F +     ++++  + 
Sbjct: 59   -----PRDLAEKLIAALPADAG--------IAKVEIAGPGFLNFFQNSDALAQRLEAALA 105

Query: 1220 NGVQPPTLNKKL-RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
            +       N    RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVG
Sbjct: 106  DAQLGVHKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVG 165

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGML+A++Q+   +       +ADL+ FY+ +KKRFDE   F  RA + VV LQ 
Sbjct: 166  DWGTQFGMLLAYMQE---NPAAAESELADLEGFYRAAKKRFDESPEFADRARELVVQLQA 222

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D +  + W    D+S    Q +YDRL V L+    +GES Y   + Q+V  L  KGLL 
Sbjct: 223  GDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYNDDLPQVVADLAAKGLLT 282

Query: 1396 LDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
             D+G + ++       +   +P+ + K+ GG+ Y T+DLAA R R    KAD ++Y  D 
Sbjct: 283  EDNGAQCVFMDEFKNAEGNPLPLIVQKAGGGYLYATTDLAATRYRAGVLKADRVLYFVDQ 342

Query: 1451 R 1451
            R
Sbjct: 343  R 343


>gi|411011655|ref|ZP_11387984.1| arginyl-tRNA ligase [Aeromonas aquariorum AAK1]
          Length = 581

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 224/565 (39%), Positives = 321/565 (56%), Gaps = 39/565 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVETMVTSANANVKLPTPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 694
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELRDLEAFYTQAKRHYDE 206

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 751
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNVSLTNKDIMGESMYN 266

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 803
              + ++V  L+ +GL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPEIVADLKARGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
              + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D +
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYV-PESVPLEHHAFGMMLGKDGR 382

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             +KTRSG TVKL +LL+E   R+   L+ +N  ++L+  E ++   A+A G +KYADLS 
Sbjct: 383  PYKTRSGGTVKLVDLLNEAEERAAALLESRN--SDLSAEEKAQVVHAIAMGAVKYADLSK 440

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DY+F +D ML   GNTA YL YAYTRI SI R AG++++ L        V L  E 
Sbjct: 441  NRTTDYIFDWDLMLSFEGNTAPYLQYAYTRIQSIFRKAGVDADTL-----GGKVVLNEEA 495

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA+ L++ +D +  V      H LC YLY++S  F  FY+ C  I KD  G  +   
Sbjct: 496  EETLAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFYEAC-PINKD--GVDEATR 552

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RLLL  ATAKV+K    +L I T
Sbjct: 553  QSRLLLCAATAKVLKLGLGVLGIHT 577



 Score =  226 bits (576), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/329 (38%), Positives = 189/329 (57%), Gaps = 28/329 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88  NFFFDPSWLAGQVETMVTSANANVKLPTPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148 RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELRDLEAFYTQAKRHYDE 206

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 361
           DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLNV+LT +   GES Y 
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNVSLTNKDIMGESMYN 266

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 413
             + ++V  L+ +GL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267 DMLPEIVADLKARGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
             + R E   AD ++Y  D R +  ++QA
Sbjct: 324 CAKYRYETLGADRVMYFIDSRQHQHLMQA 352



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 188/328 (57%), Gaps = 28/328 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F    +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDPSWLAGQVETMVTSANANVKLPTPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMELRDLEAFYTQAKRHYDE 206

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 1378
            DE F +RA   VV LQ  D   +  W+ + D++    Q+ YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQRNYDRLNVSLTNKDIMGESMYN 266

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
              + ++V  L+ +GL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPEIVADLKARGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 1431 AIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
              + R E   AD ++Y  D R +  ++Q
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQ 351


>gi|397171660|ref|ZP_10495059.1| arginyl-tRNA synthetase [Alishewanella aestuarii B11]
 gi|396086668|gb|EJI84279.1| arginyl-tRNA synthetase [Alishewanella aestuarii B11]
          Length = 579

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 229/603 (37%), Positives = 345/603 (57%), Gaps = 49/603 (8%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            +  +  +  Q AF +LG    +  +  +    +FGD+Q N AM+  K  K      NP  
Sbjct: 3    IKQLLANKTQDAFIKLGLPAETNPAVTQSTRPEFGDYQINGAMSAAKQLK-----TNPRQ 57

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY-AGEQIKDI------IVN 593
            +A+ + +++  +   +        K+E+A PGF+NV L   + AGE  K        +  
Sbjct: 58   LAEQLVALLALDDLAS--------KVEIAGPGFINVTLKPEWLAGELAKAASDARLGVSA 109

Query: 594  GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
              QP T      V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDW
Sbjct: 110  NPQPQT------VVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDW 163

Query: 654  GTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
            GTQFGMLIAHL+DK  + +  +S  +ADL+ FY+++KKRFD++  F  ++   VV LQ  
Sbjct: 164  GTQFGMLIAHLEDKLAEGVDLESVALADLEDFYRQAKKRFDDEAGFADKSRDYVVKLQSG 223

Query: 713  DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLEL 769
            +   +K W++  D S +   ++Y +LNVTLT+   + ES Y   ++ +V  L   G+   
Sbjct: 224  NAHCQKLWQLFIDTSVKHSNEVYQKLNVTLTDADIKPESAYNPMLQPIVDQLVAAGIAVE 283

Query: 770  DDGRKIMW------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
            D G  +++       E + S P  I K+ GGF Y T+DLAA + R  +  AD I+  TD 
Sbjct: 284  DQGALVVFLSELADKEGKPS-PFIIQKTGGGFLYATTDLAACQYRSHQLAADRIIIFTDA 342

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q +HF+ +E  A+KAG+L  + T  D   FG ++GED K FKTR+G TVKL+ELL+E +
Sbjct: 343  RQALHFKQVELTARKAGLLRAD-TAYDHCPFGTMMGEDGKPFKTRTGGTVKLAELLEEAV 401

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +++K+  +EL+  E++E  + V  G +K+ADLS NR  DY+FS+D ML   G T
Sbjct: 402  VRADAVVREKS--SELSEQEIAEIARKVGIGAVKFADLSKNRTSDYIFSWDAMLAFEGAT 459

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A YL YAYTR  SI R A +        +   P+ L  E+E  LA  +LR  + L  V +
Sbjct: 460  APYLQYAYTRGRSILRKAEVAD------SFQAPIVLTAEQERLLAVKILRFEETLQQVMK 513

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
            D   + LC YLY++++ F  FY+ C  ++   +G        RL+L+  +A+++ K  D+
Sbjct: 514  DAQPNLLCSYLYELASLFMTFYEACPILK---DGVDPAERDSRLMLSIISARLLAKGLDL 570

Query: 1064 LNI 1066
            L I
Sbjct: 571  LGI 573



 Score =  217 bits (552), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/361 (37%), Positives = 202/361 (55%), Gaps = 37/361 (10%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           +  +  +  Q AF +LG    +  +  +    +FGD+Q N AM+  K  K      NP  
Sbjct: 3   IKQLLANKTQDAFIKLGLPAETNPAVTQSTRPEFGDYQINGAMSAAKQLK-----TNPRQ 57

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY-AGEQIKDI------IVN 203
           +A+ + +++  +   +        K+E+A PGF+NV L   + AGE  K        +  
Sbjct: 58  LAEQLVALLALDDLAS--------KVEIAGPGFINVTLKPEWLAGELAKAASDARLGVSA 109

Query: 204 GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
             QP T      V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDW
Sbjct: 110 NPQPQT------VVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDW 163

Query: 264 GTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
           GTQFGMLIAHL+DK  + +  +S  +ADL+ FY+++KKRFD++  F  ++   VV LQ  
Sbjct: 164 GTQFGMLIAHLEDKLAEGVDLESVALADLEDFYRQAKKRFDDEAGFADKSRDYVVKLQSG 223

Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLEL 379
           +   +K W++  D S +   ++Y +LNVTLT+   + ES Y   ++ +V  L   G+   
Sbjct: 224 NAHCQKLWQLFIDTSVKHSNEVYQKLNVTLTDADIKPESAYNPMLQPIVDQLVAAGIAVE 283

Query: 380 DDGRKIMW------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
           D G  +++       E + S P  I K+ GGF Y T+DLAA + R  +  AD I+  TD 
Sbjct: 284 DQGALVVFLSELADKEGKPS-PFIIQKTGGGFLYATTDLAACQYRSHQLAADRIIIFTDA 342

Query: 434 R 434
           R
Sbjct: 343 R 343



 Score =  217 bits (552), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/361 (37%), Positives = 202/361 (55%), Gaps = 37/361 (10%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            +  +  +  Q AF +LG    +  +  +    +FGD+Q N AM+  K  K      NP  
Sbjct: 3    IKQLLANKTQDAFIKLGLPAETNPAVTQSTRPEFGDYQINGAMSAAKQLK-----TNPRQ 57

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVY-AGEQIKDI------IVN 1220
            +A+ + +++  +   +        K+E+A PGF+NV L   + AGE  K        +  
Sbjct: 58   LAEQLVALLALDDLAS--------KVEIAGPGFINVTLKPEWLAGELAKAASDARLGVSA 109

Query: 1221 GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
              QP T      V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+GDW
Sbjct: 110  NPQPQT------VVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFWGDKVIRQNHMGDW 163

Query: 1281 GTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
            GTQFGMLIAHL+DK  + +  +S  +ADL+ FY+++KKRFD++  F  ++   VV LQ  
Sbjct: 164  GTQFGMLIAHLEDKLAEGVDLESVALADLEDFYRQAKKRFDDEAGFADKSRDYVVKLQSG 223

Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLEL 1396
            +   +K W++  D S +   ++Y +LNVTLT+   + ES Y   ++ +V  L   G+   
Sbjct: 224  NAHCQKLWQLFIDTSVKHSNEVYQKLNVTLTDADIKPESAYNPMLQPIVDQLVAAGIAVE 283

Query: 1397 DDGRKIMW------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
            D G  +++       E + S P  I K+ GGF Y T+DLAA + R  +  AD I+  TD 
Sbjct: 284  DQGALVVFLSELADKEGKPS-PFIIQKTGGGFLYATTDLAACQYRSHQLAADRIIIFTDA 342

Query: 1451 R 1451
            R
Sbjct: 343  R 343


>gi|258621159|ref|ZP_05716193.1| Arginyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258586547|gb|EEW11262.1| Arginyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 597

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 322/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEISMELSDLEAFYRESKKLY 221

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PEQVSLEHHAFGMMLGKDGRP 400

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   +L+  E ++    VA   +KYADLS +
Sbjct: 401  FKTRAGGTVRLADLLDEAEERAKALIESKN--PDLSADEKAKIANTVAMAAVKYADLSKH 458

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 459  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 513

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 514  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SVKQ 569

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 570  SRLKLAALTAKTIKQGLALLGIET 593



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 190/328 (57%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102 FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 162 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEISMELSDLEAFYRESKKLY 221

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282 YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 342 AKYRYETLGADRVLYFIDSRQHQHLMQA 369



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 189/327 (57%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEISMELSDLEAFYRESKKLY 221

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG ++++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQ 368


>gi|398930158|ref|ZP_10664405.1| arginyl-tRNA synthetase [Pseudomonas sp. GM48]
 gi|398165829|gb|EJM53940.1| arginyl-tRNA synthetase [Pseudomonas sp. GM48]
          Length = 578

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 238/599 (39%), Positives = 330/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       SR+ A     
Sbjct: 58   K--PRDLAEKIIAALPTD--------ENVSKTEIAGPGFLNFFQNTDALASRLDAALADA 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +KDKN   EL   EL    + V  G +KYADLS +R  DY F+FD+ML+  
Sbjct: 398  EAQERAYTLVKDKN--PELAEAELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDQMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  +VL  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEVE-----GQIVLEAAHELELAAKLAQFGEVLNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VSEKGTPHILCTYLYDVAGLFSSFYENCPILAADTPAQMQS----RLRLAALTGRTLKQ 565



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 160/446 (35%), Positives = 224/446 (50%), Gaps = 43/446 (9%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       SR+ A     
Sbjct: 58  K--PRDLAEKIIAALPTD--------ENVSKTEIAGPGFLNFFQNTDALASRLDAALADA 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108 HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTH 487
            D R      Q  A   K   ++     +  G          P + R      L D+ T 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTE 398

Query: 488 AVQVAFPELGDKTASVASTNEKYVHK 513
           A + A+  + DK   +A    + + K
Sbjct: 399 AQERAYTLVKDKNPELAEAELRNIAK 424



 Score =  219 bits (559), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 145/364 (39%), Positives = 198/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       SR+ A     
Sbjct: 58   K--PRDLAEKIIAALPTD--------ENVSKTEIAGPGFLNFFQNTDALASRLDAALADA 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|315506779|ref|YP_004085666.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315413398|gb|ADU11515.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 572

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 318/564 (56%), Gaps = 40/564 (7%)

Query: 516  DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 575
            DFQ + A+ L +        + P +IA        +E+    +LA V   +EV+ PGF+N
Sbjct: 34   DFQSDAALGLARRLG-----QPPREIA--------AEVRERAALADVCAAVEVSGPGFLN 80

Query: 576  VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            + ++    G  +  +  +   GV  P + +   V+VD+S PN+AKEMHVGHLRST+IGD 
Sbjct: 81   LTVAGHALGGLVSALAADPRLGV--PVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDA 138

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
             +R LE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL  FYK ++ +F
Sbjct: 139  AARTLEWLGHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLDGFYKAARAKF 198

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            D+DE F++R+ Q VVALQ  DP   + W ++   S   F  +YD L+VTLT    RGES 
Sbjct: 199  DDDEAFRERSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVYDLLDVTLTGDDFRGESS 258

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +   V  L++ GLL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259  YHDQLAPTVEELDRLGLLRRSDGADCVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAA 318

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +R R     A  ++YV  L Q  HF ++   A +AG L     R + VGFG +LG D + 
Sbjct: 319  LRHRTGALGATRLLYVVGLPQRRHFEMVFAVAAQAGWLT-APARAEHVGFGSILGPDGRM 377

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
             ++R+G +VKL+ LL E ++R+    +++N   EL  +E +E  +AV  G IKYADLS +
Sbjct: 378  LRSRAGGSVKLAGLLTEAVQRATALARERN--PELGESEAAEVGRAVGVGAIKYADLSGD 435

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R+ DYV  +++ML   GNTA YL YAY+R+ SI R AG        A     VSL    E
Sbjct: 436  RHKDYVLDWERMLSLDGNTAPYLQYAYSRVRSIFRRAGA------AARPDAEVSLAEPAE 489

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  L+    V+  V   L  H L  YL+ ++ AFS FY+ C  +   AEG ++    
Sbjct: 490  RALAMELVGFAAVVEEVAGGLEFHRLTAYLHRLAVAFSAFYERCPVLR--AEGPVR---E 544

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL+L + T +V+++  D+L IRT
Sbjct: 545  SRLVLCDLTGRVLRQGLDLLGIRT 568



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/400 (35%), Positives = 214/400 (53%), Gaps = 40/400 (10%)

Query: 126 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 185
           DFQ + A+ L +        + P +IA        +E+    +LA V   +EV+ PGF+N
Sbjct: 34  DFQSDAALGLARRLG-----QPPREIA--------AEVRERAALADVCAAVEVSGPGFLN 80

Query: 186 VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           + ++    G  +  +  +   GV  P + +   V+VD+S PN+AKEMHVGHLRST+IGD 
Sbjct: 81  LTVAGHALGGLVSALAADPRLGV--PVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDA 138

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
            +R LE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL  FYK ++ +F
Sbjct: 139 AARTLEWLGHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLDGFYKAARAKF 198

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           D+DE F++R+ Q VVALQ  DP   + W ++   S   F  +YD L+VTLT    RGES 
Sbjct: 199 DDDEAFRERSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVYDLLDVTLTGDDFRGESS 258

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +   V  L++ GLL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259 YHDQLAPTVEELDRLGLLRRSDGADCVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAA 318

Query: 415 IRQRIEEEKADWIVYVTD--HRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVP-- 470
           +R R     A  ++YV     R + +++ A+A +     +++ + ++  G    +     
Sbjct: 319 LRHRTGALGATRLLYVVGLPQRRHFEMVFAVAAQAGW--LTAPARAEHVGFGSILGPDGR 376

Query: 471 -VRDRMSVRDYLSDVFTHAVQVAF-------PELGDKTAS 502
            +R R      L+ + T AVQ A        PELG+  A+
Sbjct: 377 MLRSRAGGSVKLAGLLTEAVQRATALARERNPELGESEAA 416



 Score =  220 bits (561), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/317 (39%), Positives = 179/317 (56%), Gaps = 26/317 (8%)

Query: 1143 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 1202
            DFQ + A+ L +        + P +IA        +E+    +LA V   +EV+ PGF+N
Sbjct: 34   DFQSDAALGLARRLG-----QPPREIA--------AEVRERAALADVCAAVEVSGPGFLN 80

Query: 1203 VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            + ++    G  +  +  +   GV  P + +   V+VD+S PN+AKEMHVGHLRST+IGD 
Sbjct: 81   LTVAGHALGGLVSALAADPRLGV--PVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDA 138

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
             +R LE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL  FYK ++ +F
Sbjct: 139  AARTLEWLGHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLDGFYKAARAKF 198

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            D+DE F++R+ Q VVALQ  DP   + W ++   S   F  +YD L+VTLT    RGES 
Sbjct: 199  DDDEAFRERSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVYDLLDVTLTGDDFRGESS 258

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +   V  L++ GLL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259  YHDQLAPTVEELDRLGLLRRSDGADCVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAA 318

Query: 1432 IRQRIEEEKADWIVYVT 1448
            +R R     A  ++YV 
Sbjct: 319  LRHRTGALGATRLLYVV 335


>gi|254429152|ref|ZP_05042859.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195321|gb|EDX90280.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 584

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 226/565 (40%), Positives = 328/565 (58%), Gaps = 40/565 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N A+ L K     G K  P D+A+ + + + S+ A        + K+++A PGF+
Sbjct: 41   GDFATNIALMLAK---PAGMK--PRDLAEKLIAALPSDSA--------VAKVDIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F +  +    +   + +   G+  P   +   V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQADDWLTGLLDSALADDFLGIDRP--EQPQTVVVDYSSPNLAKEMHVGHLRSTIIGD 145

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQAFYKESK 689
             + R LE+LGH V+R NHVGDWGTQFGML+A+L+++  +   +  S  +A+L+ FY+ +K
Sbjct: 146  AVVRTLEFLGHTVIRQNHVGDWGTQFGMLLAYLEEQKAEEGERELSRELANLETFYRAAK 205

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            +RFDE + F  RA   VV LQ  D      W     VS    Q IYDRL V+LT    RG
Sbjct: 206  QRFDESDTFADRARALVVKLQSGDDYCLSLWAEFNQVSLSHCQAIYDRLGVSLTPSDVRG 265

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 801
            ES Y   + Q+V  L+ KGLL    G + ++      ++   +P+ + K+DGG+ Y TSD
Sbjct: 266  ESAYNDDLAQVVADLDSKGLLSESQGAQCVFMDAFKNKEGEPLPVIVRKADGGYLYATSD 325

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAA+R R    +AD ++Y  D  Q +HF+ +   AK A  + P +T +  +GFG + G D
Sbjct: 326  LAALRYRAGTLQADRMLYFVDQRQALHFQQMFTLAKLAAFV-PEQTELAHMGFGTMNGPD 384

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR G TVKL +LLDE  +R+   +++KN   +L   EL    ++V  G +KYADL
Sbjct: 385  GRPFKTRDGGTVKLVDLLDEAEQRAFALVQEKN--PQLDEDELRTIARSVGIGAVKYADL 442

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR+ DY+F+F++ML   GNTA YLLYAYTR+AS+ R A     +  +A+ S    L  
Sbjct: 443  SKNRSSDYIFNFEQMLSFEGNTAPYLLYAYTRVASVFRKA-----ERDMASVSGDFLLNE 497

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            + E ALA  L++  +VL  V      H L  YLYD++  FS FY++C  +  + EG    
Sbjct: 498  DAEQALAARLVQFAEVLQNVADKGQPHLLSTYLYDVAGLFSSFYEHCPILSSEDEG---- 553

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNI 1066
            +   RL LA  TA+ +K   ++L +
Sbjct: 554  IRNSRLKLAALTARTLKHGMELLGL 578



 Score =  221 bits (562), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 188/323 (58%), Gaps = 28/323 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N A+ L K     G K  P D+A+ + + + S+ A        + K+++A PGF+
Sbjct: 41  GDFATNIALMLAK---PAGMK--PRDLAEKLIAALPSDSA--------VAKVDIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F +  +    +   + +   G+  P   +   V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFQADDWLTGLLDSALADDFLGIDRP--EQPQTVVVDYSSPNLAKEMHVGHLRSTIIGD 145

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQAFYKESK 299
            + R LE+LGH V+R NHVGDWGTQFGML+A+L+++  +   +  S  +A+L+ FY+ +K
Sbjct: 146 AVVRTLEFLGHTVIRQNHVGDWGTQFGMLLAYLEEQKAEEGERELSRELANLETFYRAAK 205

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           +RFDE + F  RA   VV LQ  D      W     VS    Q IYDRL V+LT    RG
Sbjct: 206 QRFDESDTFADRARALVVKLQSGDDYCLSLWAEFNQVSLSHCQAIYDRLGVSLTPSDVRG 265

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 411
           ES Y   + Q+V  L+ KGLL    G + ++      ++   +P+ + K+DGG+ Y TSD
Sbjct: 266 ESAYNDDLAQVVADLDSKGLLSESQGAQCVFMDAFKNKEGEPLPVIVRKADGGYLYATSD 325

Query: 412 LAAIRQRIEEEKADWIVYVTDHR 434
           LAA+R R    +AD ++Y  D R
Sbjct: 326 LAALRYRAGTLQADRMLYFVDQR 348



 Score =  221 bits (562), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 188/323 (58%), Gaps = 28/323 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N A+ L K     G K  P D+A+ + + + S+ A        + K+++A PGF+
Sbjct: 41   GDFATNIALMLAK---PAGMK--PRDLAEKLIAALPSDSA--------VAKVDIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F +  +    +   + +   G+  P   +   V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQADDWLTGLLDSALADDFLGIDRP--EQPQTVVVDYSSPNLAKEMHVGHLRSTIIGD 145

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQAFYKESK 1316
             + R LE+LGH V+R NHVGDWGTQFGML+A+L+++  +   +  S  +A+L+ FY+ +K
Sbjct: 146  AVVRTLEFLGHTVIRQNHVGDWGTQFGMLLAYLEEQKAEEGERELSRELANLETFYRAAK 205

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            +RFDE + F  RA   VV LQ  D      W     VS    Q IYDRL V+LT    RG
Sbjct: 206  QRFDESDTFADRARALVVKLQSGDDYCLSLWAEFNQVSLSHCQAIYDRLGVSLTPSDVRG 265

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 1428
            ES Y   + Q+V  L+ KGLL    G + ++      ++   +P+ + K+DGG+ Y TSD
Sbjct: 266  ESAYNDDLAQVVADLDSKGLLSESQGAQCVFMDAFKNKEGEPLPVIVRKADGGYLYATSD 325

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LAA+R R    +AD ++Y  D R
Sbjct: 326  LAALRYRAGTLQADRMLYFVDQR 348


>gi|398998188|ref|ZP_10700967.1| arginyl-tRNA synthetase [Pseudomonas sp. GM21]
 gi|398120849|gb|EJM10493.1| arginyl-tRNA synthetase [Pseudomonas sp. GM21]
          Length = 578

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 237/599 (39%), Positives = 332/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKTEIAGPGFLNFFQNTEALATRLDAALADA 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G+D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGKDGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +KDKN   EL   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYTLVKDKN--PELADDELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  ++L  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFTEVE-----GQIVLEAAHEHELAAKLAQFGEILNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VSDKGTPHILCTYLYDVAGLFSSFYENCPILSADTPAQMQS----RLRLAALTGRTLKQ 565



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 161/446 (36%), Positives = 227/446 (50%), Gaps = 43/446 (9%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENVSKTEIAGPGFLNFFQNTEALATRLDAALADA 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108 HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAK---KMNVPVRDRMSVRDYLSDVFTH 487
            D R      Q  A   K   ++     +  G      K   P + R      L D+ T 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGKDGRPFKTRDGGTVKLIDLLTE 398

Query: 488 AVQVAFPELGDKTASVASTNEKYVHK 513
           A + A+  + DK   +A    + + K
Sbjct: 399 AQERAYTLVKDKNPELADDELRNIAK 424



 Score =  223 bits (568), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 145/364 (39%), Positives = 200/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKTEIAGPGFLNFFQNTEALATRLDAALADA 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|409204392|ref|ZP_11232575.1| arginyl-tRNA ligase [Pseudoalteromonas flavipulchra JG1]
          Length = 580

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 237/604 (39%), Positives = 343/604 (56%), Gaps = 42/604 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  L +    A+Q A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1    MNIKSILIEKANAAMQAAGIPEGTNPAVTQSTRPQ----FGDYQINGAMGAAKALK---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
              NP ++AQ I          N  +A + +K E+A PGF+N+ L   +    ++    + 
Sbjct: 53   -TNPRELAQKIID--------NLDVADLAEKTEIAGPGFINIHLKPEFLATSLEAANTDA 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV      K  +V+VDFSSPN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+G
Sbjct: 104  KLGVAEHA--KPHKVVVDFSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVIRQNHMG 161

Query: 652  DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
            DWGTQFGMLIAHL+D     +  ++  +ADL++FY+++KKRFD++  F  +A   VV LQ
Sbjct: 162  DWGTQFGMLIAHLEDLLNQGVDLENVALADLESFYRDAKKRFDDEAGFADKARDYVVKLQ 221

Query: 711  RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 767
              D   KK W+M  D S +  +++Y +LNVTLT      ES Y   +  ++  L++KG+ 
Sbjct: 222  SGDAHCKKLWQMFIDTSVKHSEEVYGKLNVTLTRDNIMAESAYNDRLAGVIELLKEKGIA 281

Query: 768  ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
              D G ++++        G   + IV KS GGF Y T+DLAA   R  E   D I+   D
Sbjct: 282  VEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYSTTDLAACDYRSNELDVDRILIFVD 341

Query: 823  LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
              QG+HF  +E  A+KAG+L  +KT  +   FG ++G D K FKTR+G TVKLS+LLDE 
Sbjct: 342  ARQGLHFNQVEITARKAGLLK-DKTSYEPSLFGTMMGNDGKPFKTRTGGTVKLSDLLDEA 400

Query: 883  LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
            + R+ +KL D  R ++L+     E  + V  G +KYADLS +R  DY+F++D ML   G 
Sbjct: 401  VSRATEKLAD--RASDLSDEARQEIARKVGIGAVKYADLSKHRTSDYIFNWDTMLSFEGA 458

Query: 943  TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
            TA YL YAYTR+ SI R A ++S     A+ +  + ++  +E ALA  LL++ +VL L+ 
Sbjct: 459  TAPYLQYAYTRVRSIFRKANMDS-----ASLTGRIQIQAPQEKALALKLLQLEEVLDLMI 513

Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
             +   H LC YLY++++ +  FY+ C  ++ D    ++     RLLL    A  +K   D
Sbjct: 514  SEATPHVLCSYLYELASLYMTFYEACPILKDDVAADVR---ESRLLLCNLVANSLKTGLD 570

Query: 1063 ILNI 1066
            +L I
Sbjct: 571  LLGI 574



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 156/436 (35%), Positives = 225/436 (51%), Gaps = 36/436 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  L +    A+Q A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1   MNIKSILIEKANAAMQAAGIPEGTNPAVTQSTRPQ----FGDYQINGAMGAAKALK---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
             NP ++AQ I          N  +A + +K E+A PGF+N+ L   +    ++    + 
Sbjct: 53  -TNPRELAQKIID--------NLDVADLAEKTEIAGPGFINIHLKPEFLATSLEAANTDA 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GV      K  +V+VDFSSPN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+G
Sbjct: 104 KLGVAEHA--KPHKVVVDFSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVIRQNHMG 161

Query: 262 DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
           DWGTQFGMLIAHL+D     +  ++  +ADL++FY+++KKRFD++  F  +A   VV LQ
Sbjct: 162 DWGTQFGMLIAHLEDLLNQGVDLENVALADLESFYRDAKKRFDDEAGFADKARDYVVKLQ 221

Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 377
             D   KK W+M  D S +  +++Y +LNVTLT      ES Y   +  ++  L++KG+ 
Sbjct: 222 SGDAHCKKLWQMFIDTSVKHSEEVYGKLNVTLTRDNIMAESAYNDRLAGVIELLKEKGIA 281

Query: 378 ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
             D G ++++        G   + IV KS GGF Y T+DLAA   R  E   D I+   D
Sbjct: 282 VEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYSTTDLAACDYRSNELDVDRILIFVD 341

Query: 433 HRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM----NVPVRDRMSVRDYLSDVFTHA 488
            R      Q +    +K G+    +S        M      P + R      LSD+   A
Sbjct: 342 ARQGLHFNQ-VEITARKAGLLKDKTSYEPSLFGTMMGNDGKPFKTRTGGTVKLSDLLDEA 400

Query: 489 VQVAFPELGDKTASVA 504
           V  A  +L D+ + ++
Sbjct: 401 VSRATEKLADRASDLS 416



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/362 (38%), Positives = 199/362 (54%), Gaps = 31/362 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  L +    A+Q A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1    MNIKSILIEKANAAMQAAGIPEGTNPAVTQSTRPQ----FGDYQINGAMGAAKALK---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
              NP ++AQ I          N  +A + +K E+A PGF+N+ L   +    ++    + 
Sbjct: 53   -TNPRELAQKIID--------NLDVADLAEKTEIAGPGFINIHLKPEFLATSLEAANTDA 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV      K  +V+VDFSSPN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+G
Sbjct: 104  KLGVAEHA--KPHKVVVDFSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVIRQNHMG 161

Query: 1279 DWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
            DWGTQFGMLIAHL+D     +  ++  +ADL++FY+++KKRFD++  F  +A   VV LQ
Sbjct: 162  DWGTQFGMLIAHLEDLLNQGVDLENVALADLESFYRDAKKRFDDEAGFADKARDYVVKLQ 221

Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLL 1394
              D   KK W+M  D S +  +++Y +LNVTLT      ES Y   +  ++  L++KG+ 
Sbjct: 222  SGDAHCKKLWQMFIDTSVKHSEEVYGKLNVTLTRDNIMAESAYNDRLAGVIELLKEKGIA 281

Query: 1395 ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
              D G ++++        G   + IV KS GGF Y T+DLAA   R  E   D I+   D
Sbjct: 282  VEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYSTTDLAACDYRSNELDVDRILIFVD 341

Query: 1450 HR 1451
             R
Sbjct: 342  AR 343


>gi|330827801|ref|YP_004390753.1| arginyl-tRNA synthetase [Aeromonas veronii B565]
 gi|406674943|ref|ZP_11082135.1| arginine-tRNA ligase [Aeromonas veronii AMC35]
 gi|423211526|ref|ZP_17198059.1| arginine-tRNA ligase [Aeromonas veronii AER397]
 gi|328802937|gb|AEB48136.1| Arginyl-tRNA synthetase [Aeromonas veronii B565]
 gi|404613606|gb|EKB10627.1| arginine-tRNA ligase [Aeromonas veronii AER397]
 gi|404628451|gb|EKB25233.1| arginine-tRNA ligase [Aeromonas veronii AMC35]
          Length = 581

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/562 (39%), Positives = 322/562 (57%), Gaps = 33/562 (5%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDQRWLAGQVEAMVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 694
            R LE+LGH V+R NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVIRANHIGDWGTQFGMLIAYLE-KMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 751
            DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 806
              + ++V  L+ KGL    +G  +++      +D  ++ + I KSDGGF Y T+D+A  +
Sbjct: 267  DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAK 326

Query: 807  QRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFK 866
             R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + +K
Sbjct: 327  YRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYV-PESVPLEHHAFGMMLGKDGRPYK 385

Query: 867  TRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRN 926
            TRSG TVKL +LL+E   R+   L+ +N  ++L+  E +    A+A G +KYADLS NR 
Sbjct: 386  TRSGGTVKLVDLLNEAEERAAALLESRN--SDLSAEEKANVVNAIAMGAVKYADLSKNRT 443

Query: 927  LDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFA 986
             DY+F +D ML   GNTA YL YAYTRI SI R A I++E L     +  V+L  E E  
Sbjct: 444  TDYIFDWDLMLSFEGNTAPYLQYAYTRIQSIFRKANIDAETL-----TGNVTLNEEAEEV 498

Query: 987  LAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGR 1046
            LA+ L++ +D +  V      H LC YLY++S  F  FY+ C  I KD  G  +     R
Sbjct: 499  LAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFYEAC-PINKD--GVDEATRQSR 555

Query: 1047 LLLAEATAKVMKKCFDILNIRT 1068
            LLL  ATAKV+K    +L I T
Sbjct: 556  LLLCAATAKVLKLGLGVLGIHT 577



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 190/326 (58%), Gaps = 22/326 (6%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88  NFFFDQRWLAGQVEAMVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           R LE+LGH V+R NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148 RALEFLGHKVIRANHIGDWGTQFGMLIAYLE-KMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 361
           DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 416
             + ++V  L+ KGL    +G  +++      +D  ++ + I KSDGGF Y T+D+A  +
Sbjct: 267 DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAK 326

Query: 417 QRIEEEKADWIVYVTDHRSYHQVLQA 442
            R E   AD ++Y  D R +  ++QA
Sbjct: 327 YRYETLGADRVMYFIDSRQHQHLMQA 352



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 189/325 (58%), Gaps = 22/325 (6%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K       +KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDQRWLAGQVEAMVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            R LE+LGH V+R NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVIRANHIGDWGTQFGMLIAYLE-KMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 1378
            DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 1433
              + ++V  L+ KGL    +G  +++      +D  ++ + I KSDGGF Y T+D+A  +
Sbjct: 267  DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAK 326

Query: 1434 QRIEEEKADWIVYVTDHRSYHQVLQ 1458
             R E   AD ++Y  D R +  ++Q
Sbjct: 327  YRYETLGADRVMYFIDSRQHQHLMQ 351


>gi|430745672|ref|YP_007204801.1| arginyl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
 gi|430017392|gb|AGA29106.1| arginyl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
          Length = 572

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/586 (37%), Positives = 325/586 (55%), Gaps = 34/586 (5%)

Query: 487  HAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 546
            H+   A PE GD  A  A+       KFGD+Q N  MAL K  +     KNP ++A  +A
Sbjct: 9    HSFAAATPEGGDAAAFAAAVRPSTDSKFGDYQANGCMALAKSLQ-----KNPRELAHRVA 63

Query: 547  SVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNK 602
              V  + LA  P         EVA PGF+NV L   +    ++D+IV+   G+ PP   K
Sbjct: 64   EAVDLAPLAATP---------EVAGPGFLNVRLVDSWVARTLEDLIVDEALGIVPPARPK 114

Query: 603  KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 662
               V+VD+SSPN+AK MHVGH+RST+IG++++R+   LGH V+R NH+GDWG+QFGM++ 
Sbjct: 115  T--VVVDYSSPNVAKPMHVGHIRSTVIGESLARIFAALGHKVIRDNHLGDWGSQFGMILW 172

Query: 663  HLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA-LQRFDPDYKKAWE 721
              ++   +    + P+A+L   Y+ ++ +    E   + A +   A L   D + +  WE
Sbjct: 173  GWKNHRDEAAFATAPVAELARLYRLAQAKIKAKEPNVEDATRVETAKLHAGDAENRALWE 232

Query: 722  MICDVSRRDFQKIYDRLNVTL-TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 780
                      + +YDRL V    E GESFY   +  +V  LE KG+ ++ +G  +++ E 
Sbjct: 233  RFMPYCLAALKDVYDRLGVKFDVELGESFYDPMLADVVADLEAKGIAQVSEGATVVFVEG 292

Query: 781  RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAG 840
              + P+ + K DG + Y T+DLA I+ R E  + D ++YV D  QG HF+LL   A++ G
Sbjct: 293  TKA-PLIVRKRDGAYNYATTDLATIKYREETWQPDEVLYVVDHRQGDHFKLLFAVARRWG 351

Query: 841  ILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELT 900
                 +T ++ V FG +LG DRK FKTR GD V L  LLDEG+  +L  +++ +   +L 
Sbjct: 352  Y---ERTDLEHVAFGTILGTDRKPFKTRDGDVVGLESLLDEGVAEALKVVQEIS--PDLE 406

Query: 901  PTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIART 960
            P +     + V  G IKYADLS NR  DYVF + KML   GNT  YL YAY RI SI R 
Sbjct: 407  PEQHQRVAEVVGLGSIKYADLSQNRQSDYVFDWKKMLAMNGNTGAYLQYAYARIQSIFRK 466

Query: 961  AGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTA 1020
              I  E +R+  Q   ++L H  E AL   LLR+ + L L   +L  + L +YL+D++ A
Sbjct: 467  GEITPESIRL--QRPTIALSHPAERALGVRLLRLPETLELAALELKPNILTDYLFDLANA 524

Query: 1021 FSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            FS F++ C  ++ ++  +       RL LA+ TA+ +K   D+L I
Sbjct: 525  FSSFFEECPVLKAESTER----RNSRLALADITARTLKFGLDLLGI 566



 Score =  213 bits (541), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/356 (35%), Positives = 196/356 (55%), Gaps = 25/356 (7%)

Query: 97  HAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 156
           H+   A PE GD  A  A+       KFGD+Q N  MAL K  +     KNP ++A  +A
Sbjct: 9   HSFAAATPEGGDAAAFAAAVRPSTDSKFGDYQANGCMALAKSLQ-----KNPRELAHRVA 63

Query: 157 SVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNK 212
             V  + LA  P         EVA PGF+NV L   +    ++D+IV+   G+ PP   K
Sbjct: 64  EAVDLAPLAATP---------EVAGPGFLNVRLVDSWVARTLEDLIVDEALGIVPPARPK 114

Query: 213 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 272
              V+VD+SSPN+AK MHVGH+RST+IG++++R+   LGH V+R NH+GDWG+QFGM++ 
Sbjct: 115 T--VVVDYSSPNVAKPMHVGHIRSTVIGESLARIFAALGHKVIRDNHLGDWGSQFGMILW 172

Query: 273 HLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA-LQRFDPDYKKAWE 331
             ++   +    + P+A+L   Y+ ++ +    E   + A +   A L   D + +  WE
Sbjct: 173 GWKNHRDEAAFATAPVAELARLYRLAQAKIKAKEPNVEDATRVETAKLHAGDAENRALWE 232

Query: 332 MICDVSRRDFQKIYDRLNVTL-TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 390
                     + +YDRL V    E GESFY   +  +V  LE KG+ ++ +G  +++ E 
Sbjct: 233 RFMPYCLAALKDVYDRLGVKFDVELGESFYDPMLADVVADLEAKGIAQVSEGATVVFVEG 292

Query: 391 RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRS--YHQVLQAIA 444
             + P+ + K DG + Y T+DLA I+ R E  + D ++YV DHR   + ++L A+A
Sbjct: 293 TKA-PLIVRKRDGAYNYATTDLATIKYREETWQPDEVLYVVDHRQGDHFKLLFAVA 347



 Score =  212 bits (540), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/344 (36%), Positives = 189/344 (54%), Gaps = 23/344 (6%)

Query: 1114 HAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 1173
            H+   A PE GD  A  A+       KFGD+Q N  MAL K  +     KNP ++A  +A
Sbjct: 9    HSFAAATPEGGDAAAFAAAVRPSTDSKFGDYQANGCMALAKSLQ-----KNPRELAHRVA 63

Query: 1174 SVV-TSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNK 1229
              V  + LA  P         EVA PGF+NV L   +    ++D+IV+   G+ PP   K
Sbjct: 64   EAVDLAPLAATP---------EVAGPGFLNVRLVDSWVARTLEDLIVDEALGIVPPARPK 114

Query: 1230 KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIA 1289
               V+VD+SSPN+AK MHVGH+RST+IG++++R+   LGH V+R NH+GDWG+QFGM++ 
Sbjct: 115  T--VVVDYSSPNVAKPMHVGHIRSTVIGESLARIFAALGHKVIRDNHLGDWGSQFGMILW 172

Query: 1290 HLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA-LQRFDPDYKKAWE 1348
              ++   +    + P+A+L   Y+ ++ +    E   + A +   A L   D + +  WE
Sbjct: 173  GWKNHRDEAAFATAPVAELARLYRLAQAKIKAKEPNVEDATRVETAKLHAGDAENRALWE 232

Query: 1349 MICDVSRRDFQKIYDRLNVTL-TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED 1407
                      + +YDRL V    E GESFY   +  +V  LE KG+ ++ +G  +++ E 
Sbjct: 233  RFMPYCLAALKDVYDRLGVKFDVELGESFYDPMLADVVADLEAKGIAQVSEGATVVFVEG 292

Query: 1408 RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
              + P+ + K DG + Y T+DLA I+ R E  + D ++YV DHR
Sbjct: 293  TKA-PLIVRKRDGAYNYATTDLATIKYREETWQPDEVLYVVDHR 335


>gi|422651673|ref|ZP_16714466.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
            M302091]
 gi|330964749|gb|EGH65009.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
            M302091]
          Length = 578

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/566 (39%), Positives = 323/566 (57%), Gaps = 44/566 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K    K     P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGMK-----PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTIIG 630
            N F +      ++   + +   PP   +K     RV+VD S+PN+AKEMHVGHLRSTIIG
Sbjct: 88   NFFQNTAALASRLDAALAD---PPLSVRKAGTAQRVVVDLSAPNLAKEMHVGHLRSTIIG 144

Query: 631  DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 690
            D ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K+
Sbjct: 145  DGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAKQ 200

Query: 691  RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 747
            RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     GE
Sbjct: 201  RFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMGE 260

Query: 748  SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 802
            S Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+DL
Sbjct: 261  SAYNDDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDL 320

Query: 803  AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
            AAIR R +  KAD  +Y  D  Q +HF+ + E A++AG ++    +++ +GFG + G D 
Sbjct: 321  AAIRYRSKVLKADRALYFVDQRQALHFQQVFEVARRAGFVHEG-MQLEHMGFGTMNGADG 379

Query: 863  KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLS 922
            + FKTR G TVKL +LLDE   R+   +K+KN   E+   EL    +AV    +KYADLS
Sbjct: 380  RPFKTRDGGTVKLIDLLDEAEERAYTLVKEKN--PEVAEAELRSIAKAVGISAVKYADLS 437

Query: 923  HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
             +R  DY F+FD+ML   GNTA YLLYAYTR+A + R  G   +     A    + LE  
Sbjct: 438  KHRASDYSFNFDQMLSFEGNTAPYLLYAYTRVAGVFRKLGTPFD-----ASKGHIVLEAP 492

Query: 983  KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTV 1042
            +E  LA  L + N+ L  V      H LC YLYD++  FS FY+NC  +  +   + ++ 
Sbjct: 493  QEQELAARLAQFNETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENCPILGAENPDQQQS- 551

Query: 1043 HTGRLLLAEATAKVMKKCFDILNIRT 1068
               RL LA  T + +K+  D+L + T
Sbjct: 552  ---RLRLAALTGRTLKQGLDLLGLET 574



 Score =  221 bits (562), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 190/332 (57%), Gaps = 35/332 (10%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K    K     P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAKPAGMK-----PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTIIG 240
           N F +      ++   + +   PP   +K     RV+VD S+PN+AKEMHVGHLRSTIIG
Sbjct: 88  NFFQNTAALASRLDAALAD---PPLSVRKAGTAQRVVVDLSAPNLAKEMHVGHLRSTIIG 144

Query: 241 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 300
           D ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K+
Sbjct: 145 DGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAKQ 200

Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 357
           RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     GE
Sbjct: 201 RFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMGE 260

Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 412
           S Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+DL
Sbjct: 261 SAYNDDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDL 320

Query: 413 AAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           AAIR R +  KAD  +Y  D R    + QV +
Sbjct: 321 AAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352



 Score =  221 bits (562), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 190/332 (57%), Gaps = 35/332 (10%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K    K     P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGMK-----PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKL----RVLVDFSSPNIAKEMHVGHLRSTIIG 1257
            N F +      ++   + +   PP   +K     RV+VD S+PN+AKEMHVGHLRSTIIG
Sbjct: 88   NFFQNTAALASRLDAALAD---PPLSVRKAGTAQRVVVDLSAPNLAKEMHVGHLRSTIIG 144

Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
            D ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K+
Sbjct: 145  DGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAKQ 200

Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGE 1374
            RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     GE
Sbjct: 201  RFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMGE 260

Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDL 1429
            S Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+DL
Sbjct: 261  SAYNDDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDL 320

Query: 1430 AAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            AAIR R +  KAD  +Y  D R    + QV +
Sbjct: 321  AAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352


>gi|398865136|ref|ZP_10620659.1| arginyl-tRNA synthetase [Pseudomonas sp. GM78]
 gi|398243875|gb|EJN29452.1| arginyl-tRNA synthetase [Pseudomonas sp. GM78]
          Length = 578

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 238/599 (39%), Positives = 331/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A    +
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKTEIAGPGFLNFFQNTQALATRLDAALADE 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKGRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +KDKN   EL   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYTLVKDKN--PELAEAELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  +VL  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEVE-----GQIVLEAAHEHELAAKLAQFGEVLNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VSEKGTPHILCTYLYDVAGLFSSFYENCPILAADTPEQMQS----RLRLAALTGRTLKQ 565



 Score =  227 bits (579), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 160/446 (35%), Positives = 226/446 (50%), Gaps = 43/446 (9%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A    +
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENVSKTEIAGPGFLNFFQNTQALATRLDAALADE 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108 HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKGRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTH 487
            D R      Q  A   K   ++     +  G          P + R      L D+ T 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTE 398

Query: 488 AVQVAFPELGDKTASVASTNEKYVHK 513
           A + A+  + DK   +A    + + K
Sbjct: 399 AQERAYTLVKDKNPELAEAELRNIAK 424



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/364 (39%), Positives = 200/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A    +
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKTEIAGPGFLNFFQNTQALATRLDAALADE 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKGRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|383813530|ref|ZP_09968955.1| arginyl-tRNA synthetase [Serratia sp. M24T3]
 gi|383297675|gb|EIC85984.1| arginyl-tRNA synthetase [Serratia sp. M24T3]
          Length = 576

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 228/606 (37%), Positives = 337/606 (55%), Gaps = 46/606 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  LS+    A+  A    G  +   A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQALLSEKVCQALVAA----GAPSDVEAQIRQSAKAQFGDYQANGVMSVAKTLA---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
               P  +A+ + +++         L+ +  K+E+A PGF+N+FL   +        + + 
Sbjct: 53   -MPPRQLAEKVVALL--------DLSGIASKVEIAGPGFINIFLDSGFVATNADAALADA 103

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              G+ P    ++  +++D+S+PN+AKEMHVGH+RSTIIGD  +R  E LGH V+R NHVG
Sbjct: 104  KLGISPV---EQQTIVIDYSAPNVAKEMHVGHIRSTIIGDAAARTNELLGHKVIRANHVG 160

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+ +KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNENAGEMKLSDLEEFYRAAKKNYDEDEDFALRARAYVVKLQG 219

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D    + W  + DV+    Q  YDR+NVTLT     GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCLQMWRKLVDVTMVQNQLTYDRMNVTLTRDDVMGESLYNSMLPGIVSDLQDKGLAV 279

Query: 769  LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D 
Sbjct: 280  DSEGAVVVFLDEYKNKDGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDS 339

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q  H +      +KAG + P+   ++   FG++LG+D K FKTRSG T+KLS+LLDE +
Sbjct: 340  RQHQHLQQAWTIVRKAGYV-PDSVALEHHAFGMMLGKDGKPFKTRSGGTIKLSDLLDEAI 398

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+ + +  K    +L   EL     AV  G IKYADLS +R  DY+F +D ML   GNT
Sbjct: 399  VRARELILSKK--PDLPAEELENLVNAVGIGAIKYADLSKSRTTDYIFDWDNMLAFEGNT 456

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A Y+ YAYTR+ASI + A     D+ V++ + P+ L  ++E ALA  LL+  + L LV R
Sbjct: 457  APYMQYAYTRVASIFKRA-----DIDVSSLTAPMVLTEDRELALATRLLQFEETLTLVAR 511

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIE-KDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
            D   H +C YLYD++  FS FY++C  +  +DA      V   RL LA  T + +K   D
Sbjct: 512  DGTPHVMCAYLYDVAGLFSGFYEDCPILNAEDA-----NVRNSRLKLALLTQRTLKTGLD 566

Query: 1063 ILNIRT 1068
             L I T
Sbjct: 567  TLGIET 572



 Score =  215 bits (547), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 201/369 (54%), Gaps = 32/369 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  LS+    A+  A    G  +   A   +    +FGD+Q N  M++ K       
Sbjct: 1   MNIQALLSEKVCQALVAA----GAPSDVEAQIRQSAKAQFGDYQANGVMSVAKTLA---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
              P  +A+ + +++         L+ +  K+E+A PGF+N+FL   +        + + 
Sbjct: 53  -MPPRQLAEKVVALL--------DLSGIASKVEIAGPGFINIFLDSGFVATNADAALADA 103

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             G+ P    ++  +++D+S+PN+AKEMHVGH+RSTIIGD  +R  E LGH V+R NHVG
Sbjct: 104 KLGISPV---EQQTIVIDYSAPNVAKEMHVGHIRSTIIGDAAARTNELLGHKVIRANHVG 160

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGMLIA+L+ K  +       ++DL+ FY+ +KK +DEDE F  RA   VV LQ 
Sbjct: 161 DWGTQFGMLIAYLE-KVQNENAGEMKLSDLEEFYRAAKKNYDEDEDFALRARAYVVKLQG 219

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D    + W  + DV+    Q  YDR+NVTLT     GES Y   +  +V  L+ KGL  
Sbjct: 220 GDEYCLQMWRKLVDVTMVQNQLTYDRMNVTLTRDDVMGESLYNSMLPGIVSDLQDKGLAV 279

Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D 
Sbjct: 280 DSEGAVVVFLDEYKNKDGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDS 339

Query: 434 RSYHQVLQA 442
           R +  + QA
Sbjct: 340 RQHQHLQQA 348



 Score =  214 bits (544), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/368 (35%), Positives = 201/368 (54%), Gaps = 33/368 (8%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  LS+    A+  A    G  +   A   +    +FGD+Q N  M++ K       
Sbjct: 1    MNIQALLSEKVCQALVAA----GAPSDVEAQIRQSAKAQFGDYQANGVMSVAKTLA---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
               P  +A+ + +++         L+ +  K+E+A PGF+N+FL   +        + + 
Sbjct: 53   -MPPRQLAEKVVALL--------DLSGIASKVEIAGPGFINIFLDSGFVATNADAALADA 103

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              G+ P    ++  +++D+S+PN+AKEMHVGH+RSTIIGD  +R  E LGH V+R NHVG
Sbjct: 104  KLGISPV---EQQTIVIDYSAPNVAKEMHVGHIRSTIIGDAAARTNELLGHKVIRANHVG 160

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGMLIA+L+ K  +       ++DL+ FY+ +KK +DEDE F  RA   VV LQ 
Sbjct: 161  DWGTQFGMLIAYLE-KVQNENAGEMKLSDLEEFYRAAKKNYDEDEDFALRARAYVVKLQG 219

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D    + W  + DV+    Q  YDR+NVTLT     GES Y   +  +V  L+ KGL  
Sbjct: 220  GDEYCLQMWRKLVDVTMVQNQLTYDRMNVTLTRDDVMGESLYNSMLPGIVSDLQDKGLAV 279

Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G  +++ +   ++   PM ++  K DGG+ Y T+D+A  + R E   AD ++Y  D 
Sbjct: 280  DSEGAVVVFLDEYKNKDGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDS 339

Query: 1451 RSYHQVLQ 1458
            R  HQ LQ
Sbjct: 340  RQ-HQHLQ 346


>gi|302870428|ref|YP_003839065.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302573287|gb|ADL49489.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 572

 Score =  372 bits (954), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 319/564 (56%), Gaps = 40/564 (7%)

Query: 516  DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 575
            DFQ + A+ L +        + P +IA        +E+    +LA V   +EV+ PGF+N
Sbjct: 34   DFQSDAALGLARRLG-----RPPREIA--------AEVRERAALADVCAAVEVSGPGFLN 80

Query: 576  VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            + ++    G  +  +  +   GV  P + +   V+VD+S PN+AKEMHVGHLRST+IGD 
Sbjct: 81   LTVAGHALGGLVSALAADPRLGV--PVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDA 138

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
             +R LE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL  FYK ++++F
Sbjct: 139  AARTLEWLGHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLDGFYKAAREKF 198

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            D+DE F++R+ Q VVALQ  DP   + W ++   S   F  +YD L+VTLT    RGES 
Sbjct: 199  DDDEAFRERSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVYDLLDVTLTGDDFRGESS 258

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +   V  L++ GLL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259  YHDQLAPTVEELDRLGLLRRSDGADCVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAA 318

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +R R     A  ++YV  L Q  HF ++   A +AG L     R + VGFG +LG D + 
Sbjct: 319  LRHRTGALGATRLLYVVGLPQRRHFEMVFAVAAQAGWLT-APARAEHVGFGSILGPDGRM 377

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
             ++R+G +VKL+ LL E ++R+    +++N   EL  +E +E  +AV  G IKYADLS +
Sbjct: 378  LRSRAGGSVKLAGLLTEAVQRATALARERN--PELGESEAAEVGRAVGVGAIKYADLSGD 435

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R+ DYV  +++ML   GNTA YL YAY+R+ SI R AG        A     VSL    E
Sbjct: 436  RHKDYVLDWERMLSLDGNTAPYLQYAYSRVRSIFRRAGA------AARPDAEVSLAEPAE 489

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  L+    V+  V   L  H L  YL+ ++ AFS FY+ C  +   AEG ++    
Sbjct: 490  RALAMELVGFAAVVEEVAGGLEFHRLTAYLHRLAVAFSAFYERCPVLR--AEGPVR---E 544

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL+L + T +V+++  ++L IRT
Sbjct: 545  SRLVLCDLTGRVLRQGLNLLGIRT 568



 Score =  227 bits (578), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/400 (35%), Positives = 215/400 (53%), Gaps = 40/400 (10%)

Query: 126 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 185
           DFQ + A+ L +        + P +IA        +E+    +LA V   +EV+ PGF+N
Sbjct: 34  DFQSDAALGLARRLG-----RPPREIA--------AEVRERAALADVCAAVEVSGPGFLN 80

Query: 186 VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           + ++    G  +  +  +   GV  P + +   V+VD+S PN+AKEMHVGHLRST+IGD 
Sbjct: 81  LTVAGHALGGLVSALAADPRLGV--PVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDA 138

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
            +R LE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL  FYK ++++F
Sbjct: 139 AARTLEWLGHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLDGFYKAAREKF 198

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           D+DE F++R+ Q VVALQ  DP   + W ++   S   F  +YD L+VTLT    RGES 
Sbjct: 199 DDDEAFRERSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVYDLLDVTLTGDDFRGESS 258

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +   V  L++ GLL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259 YHDQLAPTVEELDRLGLLRRSDGADCVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAA 318

Query: 415 IRQRIEEEKADWIVYVTD--HRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVP-- 470
           +R R     A  ++YV     R + +++ A+A +     +++ + ++  G    +     
Sbjct: 319 LRHRTGALGATRLLYVVGLPQRRHFEMVFAVAAQAGW--LTAPARAEHVGFGSILGPDGR 376

Query: 471 -VRDRMSVRDYLSDVFTHAVQVAF-------PELGDKTAS 502
            +R R      L+ + T AVQ A        PELG+  A+
Sbjct: 377 MLRSRAGGSVKLAGLLTEAVQRATALARERNPELGESEAA 416



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/317 (39%), Positives = 180/317 (56%), Gaps = 26/317 (8%)

Query: 1143 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 1202
            DFQ + A+ L +        + P +IA        +E+    +LA V   +EV+ PGF+N
Sbjct: 34   DFQSDAALGLARRLG-----RPPREIA--------AEVRERAALADVCAAVEVSGPGFLN 80

Query: 1203 VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            + ++    G  +  +  +   GV  P + +   V+VD+S PN+AKEMHVGHLRST+IGD 
Sbjct: 81   LTVAGHALGGLVSALAADPRLGV--PVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDA 138

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
             +R LE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL  FYK ++++F
Sbjct: 139  AARTLEWLGHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLDGFYKAAREKF 198

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            D+DE F++R+ Q VVALQ  DP   + W ++   S   F  +YD L+VTLT    RGES 
Sbjct: 199  DDDEAFRERSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVYDLLDVTLTGDDFRGESS 258

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +   V  L++ GLL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259  YHDQLAPTVEELDRLGLLRRSDGADCVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAA 318

Query: 1432 IRQRIEEEKADWIVYVT 1448
            +R R     A  ++YV 
Sbjct: 319  LRHRTGALGATRLLYVV 335


>gi|398916530|ref|ZP_10657785.1| arginyl-tRNA synthetase [Pseudomonas sp. GM49]
 gi|398174677|gb|EJM62465.1| arginyl-tRNA synthetase [Pseudomonas sp. GM49]
          Length = 578

 Score =  372 bits (954), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 239/599 (39%), Positives = 330/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + I K E+A PGF+N F       SR+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENISKTEIAGPGFLNFFQNTDALASRLDAALADA 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  KIGVRKTGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +KDKN   EL  TEL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYTLVKDKN--PELADTELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  ++L  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEVE-----GQIVLEAAHEHELAAKLAQFGEILNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VSEKGTPHILCTYLYDVAGLFSSFYENCPILAADTPAQMQS----RLRLAALTGRTLKQ 565



 Score =  226 bits (577), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 162/446 (36%), Positives = 225/446 (50%), Gaps = 43/446 (9%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + I K E+A PGF+N F       SR+ A     
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENISKTEIAGPGFLNFFQNTDALASRLDAALADA 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108 KIGVRKTGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTH 487
            D R      Q  A   K   ++     +  G          P + R      L D+ T 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTE 398

Query: 488 AVQVAFPELGDKTASVASTNEKYVHK 513
           A + A+  + DK   +A T  + + K
Sbjct: 399 AQERAYTLVKDKNPELADTELRNIAK 424



 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 146/364 (40%), Positives = 198/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + I K E+A PGF+N F       SR+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENISKTEIAGPGFLNFFQNTDALASRLDAALADA 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  KIGVRKTGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|421551115|ref|ZP_15997115.1| arginine--tRNA ligase [Neisseria meningitidis 69166]
 gi|433471846|ref|ZP_20429229.1| arginine--tRNA ligase [Neisseria meningitidis 68094]
 gi|433477959|ref|ZP_20435276.1| arginine--tRNA ligase [Neisseria meningitidis 70012]
 gi|402328649|gb|EJU64016.1| arginine--tRNA ligase [Neisseria meningitidis 69166]
 gi|432207803|gb|ELK63791.1| arginine--tRNA ligase [Neisseria meningitidis 68094]
 gi|432214364|gb|ELK70265.1| arginine--tRNA ligase [Neisseria meningitidis 70012]
          Length = 572

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 233/561 (41%), Positives = 317/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I+  + +        ++   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R+    AD ++YV D  Q +HF  L   + KAG L P      FVGFG ++G+D K F
Sbjct: 321  RYRVGTLHADRLLYVVDHRQALHFEQLFTTSHKAGYL-PENVGAAFVGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R A   SE       + P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKA---SE----WDATAPTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +     
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  ++L I
Sbjct: 546  RLQLAKLTGDTLKQGLELLGI 566



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/416 (36%), Positives = 215/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I+  + +        ++   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P +
Sbjct: 321 RYRVGTLHADRLLYVVDHRQALHFEQLFTTSHKAGYLPENVGAAFVGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 184/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I+  + +        ++   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R+    AD ++YV DHR
Sbjct: 321  RYRVGTLHADRLLYVVDHR 339


>gi|312882113|ref|ZP_07741863.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370249|gb|EFP97751.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 577

 Score =  371 bits (953), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 322/564 (57%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M + K         NP + AQ     V  EL     L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----MNPREFAQK----VIDEL----KLDGIASKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q    + +        K+  V+ D+S+PN+AKEM V H+RST+IGD 
Sbjct: 82   FINIFLSEEFLATQADYALSDDRLGIDKEKQQTVVTDYSAPNVAKEMAVHHIRSTVIGDA 141

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            ++R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY++SKK F
Sbjct: 142  VTRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRDSKKLF 201

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 749
            DEDE F  +A   VV LQ  D      W+ + D++    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEAFATKARNYVVKLQSGDEYCAGMWKKLVDITMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+KKGL+E D+G ++++ +   ++   PM ++  KSDGGF Y T+D+A 
Sbjct: 262  YNDMLGGIVADLKKKGLVEEDEGAQVVFLDEFKNKDGEPMGVIVQKSDGGFLYTTTDIAC 321

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   A+ ++Y  D  Q  H        +KAG + P    ++   FG++LG+D K 
Sbjct: 322  AKYRYETLGANRVLYFIDSRQHQHLMQAWTIVRKAGYI-PENVTLEHHAFGMMLGKDGKP 380

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G +VKL++LLDE   R+   ++ KN   +L+  E +     VA   +KYADLS +
Sbjct: 381  FKTRAGGSVKLTDLLDEAEERAAKLIESKN--PQLSAEEKTAIANTVAMAAVKYADLSKH 438

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+ASI   A I+ + L+       + +  EKE
Sbjct: 439  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFAKAEISMDSLQ-----GDIKIVDEKE 493

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V  +   H LC YL++++  FS FY+ C  +  + E    ++  
Sbjct: 494  KALITKLLQFEEAVKAVASEGLPHVLCTYLFELAGQFSSFYEACPILNNEDE----SIKQ 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+  D+L I T
Sbjct: 550  SRLKLAALTAKTIKQGLDLLGIET 573



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 193/328 (58%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M + K         NP + AQ     V  EL     L  +  K E+A PG
Sbjct: 35  QFGDYQANGVMGVAKKLG-----MNPREFAQK----VIDEL----KLDGIASKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q    + +        K+  V+ D+S+PN+AKEM V H+RST+IGD 
Sbjct: 82  FINIFLSEEFLATQADYALSDDRLGIDKEKQQTVVTDYSAPNVAKEMAVHHIRSTVIGDA 141

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           ++R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY++SKK F
Sbjct: 142 VTRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRDSKKLF 201

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 359
           DEDE F  +A   VV LQ  D      W+ + D++    Q+ YDRLNV+L+     GES 
Sbjct: 202 DEDEAFATKARNYVVKLQSGDEYCAGMWKKLVDITMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+KKGL+E D+G ++++ +   ++   PM ++  KSDGGF Y T+D+A 
Sbjct: 262 YNDMLGGIVADLKKKGLVEEDEGAQVVFLDEFKNKDGEPMGVIVQKSDGGFLYTTTDIAC 321

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   A+ ++Y  D R +  ++QA
Sbjct: 322 AKYRYETLGANRVLYFIDSRQHQHLMQA 349



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 192/327 (58%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M + K         NP + AQ     V  EL     L  +  K E+A PG
Sbjct: 35   QFGDYQANGVMGVAKKLG-----MNPREFAQK----VIDEL----KLDGIASKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q    + +        K+  V+ D+S+PN+AKEM V H+RST+IGD 
Sbjct: 82   FINIFLSEEFLATQADYALSDDRLGIDKEKQQTVVTDYSAPNVAKEMAVHHIRSTVIGDA 141

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            ++R LE+LGH V+R NH+GDWGTQFGMLIA+L+    +    S  ++DL+AFY++SKK F
Sbjct: 142  VTRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRDSKKLF 201

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESF 1376
            DEDE F  +A   VV LQ  D      W+ + D++    Q+ YDRLNV+L+     GES 
Sbjct: 202  DEDEAFATKARNYVVKLQSGDEYCAGMWKKLVDITMIQNQRNYDRLNVSLSRDDVMGESM 261

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+KKGL+E D+G ++++ +   ++   PM ++  KSDGGF Y T+D+A 
Sbjct: 262  YNDMLGGIVADLKKKGLVEEDEGAQVVFLDEFKNKDGEPMGVIVQKSDGGFLYTTTDIAC 321

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   A+ ++Y  D R +  ++Q
Sbjct: 322  AKYRYETLGANRVLYFIDSRQHQHLMQ 348


>gi|392553905|ref|ZP_10301042.1| arginyl-tRNA ligase [Pseudoalteromonas undina NCIMB 2128]
          Length = 580

 Score =  371 bits (953), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 227/605 (37%), Positives = 342/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            M++R  L +    A+  A  PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1    MNIRTILVEKAIAAMTAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKMK--- 52

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
               NP ++AQ I   +         ++ + +K E+A PGF+N+ L   +  + ++    N
Sbjct: 53   --SNPRELAQKIIDQL--------DVSDIAEKTEIAGPGFINIHLKPEFLAQSVQ--AAN 100

Query: 594  GVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
                  +N   K  +V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  VVR NH+
Sbjct: 101  NHAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHM 160

Query: 651  GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            GDWGTQFGMLIAHL+D+    +   +  +ADL+ FY+++KKRFD++E F  +A   VV L
Sbjct: 161  GDWGTQFGMLIAHLEDQINQGVDLDTVALADLETFYRDAKKRFDDEEGFADKARNYVVKL 220

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 766
            Q  D   +K W++    S +  +++Y RLNVTLT      ES Y   +  ++  L+ K +
Sbjct: 221  QSGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNI 280

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
                 G ++++      +D       + KS GGF Y T+DLAA   R  +  A+ I+   
Sbjct: 281  AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 822  DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
            D  Q +HF  +E  A+KAG+L  ++T  +F  FG ++G D K FKTR+G TVKL++LL+E
Sbjct: 341  DARQSLHFNQVELTARKAGLLR-DETSYEFCPFGTMMGADGKPFKTRTGGTVKLADLLEE 399

Query: 882  GLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
             + R+  KL +  R ++L+  + SE  + V  G +KYADLS +R  DY+F++D ML   G
Sbjct: 400  SITRAAAKLAE--RESDLSDEDRSEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLSFEG 457

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
             TA YL YAYTR+ SI R +G+++  L+       VS+   +E  LA  LL++ +VL L+
Sbjct: 458  ATAPYLQYAYTRVRSIFRKSGVDAASLK-----ADVSIIEPQEKTLALKLLQLEEVLDLM 512

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
              +   H LC YLY++++ +  FY+ C  ++   EG   +V   RL+L    A  +K   
Sbjct: 513  INEATPHVLCGYLYELASLYMTFYEACPVLK---EGVEPSVRDSRLVLCNLVADTLKTGL 569

Query: 1062 DILNI 1066
            D+L I
Sbjct: 570  DLLGI 574



 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/363 (36%), Positives = 197/363 (54%), Gaps = 33/363 (9%)

Query: 85  MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           M++R  L +    A+  A  PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1   MNIRTILVEKAIAAMTAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKMK--- 52

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
              NP ++AQ I   +         ++ + +K E+A PGF+N+ L   +  + ++    N
Sbjct: 53  --SNPRELAQKIIDQL--------DVSDIAEKTEIAGPGFINIHLKPEFLAQSVQ--AAN 100

Query: 204 GVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
                 +N   K  +V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  VVR NH+
Sbjct: 101 NHAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHM 160

Query: 261 GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           GDWGTQFGMLIAHL+D+    +   +  +ADL+ FY+++KKRFD++E F  +A   VV L
Sbjct: 161 GDWGTQFGMLIAHLEDQINQGVDLDTVALADLETFYRDAKKRFDDEEGFADKARNYVVKL 220

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 376
           Q  D   +K W++    S +  +++Y RLNVTLT      ES Y   +  ++  L+ K +
Sbjct: 221 QSGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNI 280

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
                G ++++      +D       + KS GGF Y T+DLAA   R  +  A+ I+   
Sbjct: 281 AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 432 DHR 434
           D R
Sbjct: 341 DAR 343



 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/363 (36%), Positives = 197/363 (54%), Gaps = 33/363 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            M++R  L +    A+  A  PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1    MNIRTILVEKAIAAMTAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKMK--- 52

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
               NP ++AQ I   +         ++ + +K E+A PGF+N+ L   +  + ++    N
Sbjct: 53   --SNPRELAQKIIDQL--------DVSDIAEKTEIAGPGFINIHLKPEFLAQSVQ--AAN 100

Query: 1221 GVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
                  +N   K  +V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  VVR NH+
Sbjct: 101  NHAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHM 160

Query: 1278 GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            GDWGTQFGMLIAHL+D+    +   +  +ADL+ FY+++KKRFD++E F  +A   VV L
Sbjct: 161  GDWGTQFGMLIAHLEDQINQGVDLDTVALADLETFYRDAKKRFDDEEGFADKARNYVVKL 220

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 1393
            Q  D   +K W++    S +  +++Y RLNVTLT      ES Y   +  ++  L+ K +
Sbjct: 221  QSGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNI 280

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
                 G ++++      +D       + KS GGF Y T+DLAA   R  +  A+ I+   
Sbjct: 281  AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 1449 DHR 1451
            D R
Sbjct: 341  DAR 343


>gi|416177313|ref|ZP_11610019.1| arginyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|416191492|ref|ZP_11616118.1| arginyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|433492896|ref|ZP_20449985.1| arginine--tRNA ligase [Neisseria meningitidis NM586]
 gi|433502172|ref|ZP_20459142.1| arginine--tRNA ligase [Neisseria meningitidis NM126]
 gi|325132648|gb|EGC55334.1| arginyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138564|gb|EGC61127.1| arginyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|432227191|gb|ELK82902.1| arginine--tRNA ligase [Neisseria meningitidis NM586]
 gi|432242846|gb|ELK98361.1| arginine--tRNA ligase [Neisseria meningitidis NM126]
          Length = 572

 Score =  371 bits (952), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 233/561 (41%), Positives = 316/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I+  + +        ++   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKARFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R     AD ++YV D  Q +HF  L   + KAG L P      FVGFG ++G+D K F
Sbjct: 321  RYRFGTLHADRLLYVVDHRQALHFEQLFTTSHKAGYL-PENVGAAFVGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R A   SE       + P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKA---SE----WDATAPTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +     
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  ++L I
Sbjct: 546  RLQLAKLTGDTLKQGLELLGI 566



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 152/416 (36%), Positives = 214/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I+  + +        ++   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKARFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R R     AD ++YV DHR      Q      K   +  +  +   G    M     P +
Sbjct: 321 RYRFGTLHADRLLYVVDHRQALHFEQLFTTSHKAGYLPENVGAAFVGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  217 bits (552), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 183/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I+  + +        ++   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKARFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DDG K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQAVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R     AD ++YV DHR
Sbjct: 321  RYRFGTLHADRLLYVVDHR 339


>gi|424807305|ref|ZP_18232713.1| arginyl-tRNA synthetase [Vibrio mimicus SX-4]
 gi|342325247|gb|EGU21027.1| arginyl-tRNA synthetase [Vibrio mimicus SX-4]
          Length = 597

 Score =  371 bits (952), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 220/564 (39%), Positives = 321/564 (56%), Gaps = 33/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEISMELSDLEAFYRESKKLY 221

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  +V  L+ KGL   DDG + ++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQAVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
             + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D + 
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PEQVSLEHHAFGMMLGKDGRP 400

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TV+L++LLDE   R+   ++ KN   +L+  E ++    VA   +KYADLS +
Sbjct: 401  FKTRAGGTVRLADLLDEAEERAKALIESKN--PDLSADEKAKIANTVAMAAVKYADLSKH 458

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  EKE
Sbjct: 459  RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----TGHIQITEEKE 513

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +V  
Sbjct: 514  KALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----SVKQ 569

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL LA  TAK +K+   +L I T
Sbjct: 570  SRLKLAALTAKTIKQGLALLGIET 593



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 189/328 (57%), Gaps = 21/328 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102 FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 162 VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEISMELSDLEAFYRESKKLY 221

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222 DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  +V  L+ KGL   DDG + ++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282 YNDMLPLIVSDLKAKGLAVEDDGAQAVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            + R E   AD ++Y  D R +  ++QA
Sbjct: 342 AKYRYETLGADRVLYFIDSRQHQHLMQA 369



 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 188/327 (57%), Gaps = 21/327 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 55   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 101

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+FLS  +   Q +  + +            ++ D+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 102  FINIFLSEEFLAAQAEAALADERLGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDA 161

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            + R LE+LGH V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESKK +
Sbjct: 162  VVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEISMELSDLEAFYRESKKLY 221

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            DEDE F + A   VV LQ  DP   + W+ + DV+    Q+ YDRLNV+LT     GES 
Sbjct: 222  DEDEQFAETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESM 281

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW---GEDRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  +V  L+ KGL   DDG + ++    +++   PM ++  K DGGF Y T+D+A 
Sbjct: 282  YNDMLPLIVSDLKAKGLAVEDDGAQAVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIAC 341

Query: 1432 IRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
             + R E   AD ++Y  D R +  ++Q
Sbjct: 342  AKYRYETLGADRVLYFIDSRQHQHLMQ 368


>gi|392547085|ref|ZP_10294222.1| arginyl-tRNA ligase [Pseudoalteromonas rubra ATCC 29570]
          Length = 580

 Score =  371 bits (952), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 235/610 (38%), Positives = 341/610 (55%), Gaps = 54/610 (8%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  L +    A+  A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1    MNIKSILIEKALSAMAAAGIPEGTNPAVTQSTRAQ----FGDYQINGAMGAAKALK---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
              NP ++AQ I          N  ++ V  K E+A PGF+N+ L          + +   
Sbjct: 53   -TNPRELAQKIID--------NLDVSDVAAKTEIAGPGFINIHLK--------PEFLAAS 95

Query: 595  VQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 645
            ++    + KL          V+VDFSSPN+AKEMHVGHLRSTIIGD + R LE+ G  V 
Sbjct: 96   LEAANQDAKLGVAEHAQAQNVVVDFSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDKVT 155

Query: 646  RLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 704
            R NHVGDWGTQFGMLIAHL+D     +  ++  +ADL+ FY+++KKRFD++E F  +A  
Sbjct: 156  RQNHVGDWGTQFGMLIAHLEDMLAQGIDLENVALADLETFYRDAKKRFDDEEGFSDKARD 215

Query: 705  CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYL 761
             VV LQ  D   +K W++  D S +  +++Y +LNVTLT      ES Y   +  ++  L
Sbjct: 216  YVVKLQGGDAHCQKLWQLFIDTSVKHSEEVYKKLNVTLTRDDIMAESAYNDRLAGIITLL 275

Query: 762  EKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADW 816
            + K +   D G ++++        G   + IV KS GGF Y T+DLAA   R  E  A+ 
Sbjct: 276  KDKNIAVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYATTDLAACDYRSNELGAER 335

Query: 817  IVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLS 876
            I+   D  Q +HF  +E  A+KAG+L  ++T  +F  FG ++G D K FKTR+G TVKL+
Sbjct: 336  ILIFVDARQSLHFNQVELTARKAGLLR-DETSYEFCPFGTMMGSDGKPFKTRTGGTVKLA 394

Query: 877  ELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKM 936
            ELLDE + R+ +KL D  R +EL+    +E  + V  G +KYADLS +R  DY+F++D M
Sbjct: 395  ELLDEAVSRASEKLAD--RASELSAEARAEIARKVGIGAVKYADLSKHRTSDYIFNWDTM 452

Query: 937  LDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMND 996
            L   G TA YL YAYTR+ SI R AG++S     AA S  +++   +E ALA  LL++ +
Sbjct: 453  LSFEGATAPYLQYAYTRVRSIFRKAGVDS-----AALSGSINIVEPQEKALALKLLQLEE 507

Query: 997  VLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
            VL L+  +   H LC YLY++++ +  FY+ C  ++ D   +++     RLLL    A+ 
Sbjct: 508  VLDLMIGEATPHVLCGYLYELASLYMTFYEACPILKDDVSAEVR---ESRLLLCNLVART 564

Query: 1057 MKKCFDILNI 1066
            +    ++L I
Sbjct: 565  LNTGLELLGI 574



 Score =  216 bits (551), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 153/447 (34%), Positives = 224/447 (50%), Gaps = 56/447 (12%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  L +    A+  A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1   MNIKSILIEKALSAMAAAGIPEGTNPAVTQSTRAQ----FGDYQINGAMGAAKALK---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
             NP ++AQ I          N  ++ V  K E+A PGF+N+ L          + +   
Sbjct: 53  -TNPRELAQKIID--------NLDVSDVAAKTEIAGPGFINIHLK--------PEFLAAS 95

Query: 205 VQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 255
           ++    + KL          V+VDFSSPN+AKEMHVGHLRSTIIGD + R LE+ G  V 
Sbjct: 96  LEAANQDAKLGVAEHAQAQNVVVDFSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDKVT 155

Query: 256 RLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 314
           R NHVGDWGTQFGMLIAHL+D     +  ++  +ADL+ FY+++KKRFD++E F  +A  
Sbjct: 156 RQNHVGDWGTQFGMLIAHLEDMLAQGIDLENVALADLETFYRDAKKRFDDEEGFSDKARD 215

Query: 315 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYL 371
            VV LQ  D   +K W++  D S +  +++Y +LNVTLT      ES Y   +  ++  L
Sbjct: 216 YVVKLQGGDAHCQKLWQLFIDTSVKHSEEVYKKLNVTLTRDDIMAESAYNDRLAGIITLL 275

Query: 372 EKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADW 426
           + K +   D G ++++        G   + IV KS GGF Y T+DLAA   R  E  A+ 
Sbjct: 276 KDKNIAVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYATTDLAACDYRSNELGAER 335

Query: 427 IVYVTDHR-SYHQVLQAIAEEEKKQGISSSSSS-------QTKGTAKKMNVPVRDRMSVR 478
           I+   D R S H     +    +K G+    +S          G+  K   P + R    
Sbjct: 336 ILIFVDARQSLH--FNQVELTARKAGLLRDETSYEFCPFGTMMGSDGK---PFKTRTGGT 390

Query: 479 DYLSDVFTHAVQVAFPELGDKTASVAS 505
             L+++   AV  A  +L D+ + +++
Sbjct: 391 VKLAELLDEAVSRASEKLADRASELSA 417



 Score =  216 bits (549), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/368 (37%), Positives = 194/368 (52%), Gaps = 43/368 (11%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  L +    A+  A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1    MNIKSILIEKALSAMAAAGIPEGTNPAVTQSTRAQ----FGDYQINGAMGAAKALK---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
              NP ++AQ I          N  ++ V  K E+A PGF+N+ L          + +   
Sbjct: 53   -TNPRELAQKIID--------NLDVSDVAAKTEIAGPGFINIHLK--------PEFLAAS 95

Query: 1222 VQPPTLNKKL---------RVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 1272
            ++    + KL          V+VDFSSPN+AKEMHVGHLRSTIIGD + R LE+ G  V 
Sbjct: 96   LEAANQDAKLGVAEHAQAQNVVVDFSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDKVT 155

Query: 1273 RLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 1331
            R NHVGDWGTQFGMLIAHL+D     +  ++  +ADL+ FY+++KKRFD++E F  +A  
Sbjct: 156  RQNHVGDWGTQFGMLIAHLEDMLAQGIDLENVALADLETFYRDAKKRFDDEEGFSDKARD 215

Query: 1332 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYL 1388
             VV LQ  D   +K W++  D S +  +++Y +LNVTLT      ES Y   +  ++  L
Sbjct: 216  YVVKLQGGDAHCQKLWQLFIDTSVKHSEEVYKKLNVTLTRDDIMAESAYNDRLAGIITLL 275

Query: 1389 EKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADW 1443
            + K +   D G ++++        G   + IV KS GGF Y T+DLAA   R  E  A+ 
Sbjct: 276  KDKNIAVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYATTDLAACDYRSNELGAER 335

Query: 1444 IVYVTDHR 1451
            I+   D R
Sbjct: 336  ILIFVDAR 343


>gi|359436849|ref|ZP_09226928.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
 gi|359446787|ref|ZP_09236430.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
 gi|358028446|dbj|GAA63177.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
 gi|358039360|dbj|GAA72679.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
          Length = 580

 Score =  371 bits (952), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 227/605 (37%), Positives = 342/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            M++R  L +    A+  A  PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1    MNIRTILVEKAIAAMTAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKMK--- 52

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
               NP ++AQ I   +         ++ + +K E+A PGF+N+ L   +  + ++    N
Sbjct: 53   --SNPRELAQKIIDQL--------DVSDIAEKTEIAGPGFINIHLKPEFLAQSVQ--AAN 100

Query: 594  GVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
                  +N   K  +V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  VVR NH+
Sbjct: 101  NHAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHM 160

Query: 651  GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            GDWGTQFGMLIAHL+DK    +   +  +ADL+ FY+++KKRFD++E F  +A   VV L
Sbjct: 161  GDWGTQFGMLIAHLEDKINQGVDLDTVALADLETFYRDAKKRFDDEEGFADKARNYVVKL 220

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 766
            Q  D   +K W++    S +  +++Y RLNVTLT      ES Y   +  ++  L+ K +
Sbjct: 221  QGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNI 280

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
                 G ++++      +D       + KS GGF Y T+DLAA   R  +  A+ I+   
Sbjct: 281  AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 822  DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
            D  Q +HF  +E  A+KAG+L  ++T  +F  FG ++G D K FKTR+G TVKL++LL+E
Sbjct: 341  DARQSLHFNQVELTARKAGLLR-DETSYEFCPFGTMMGADGKPFKTRTGGTVKLADLLEE 399

Query: 882  GLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
             + R+  KL +  R ++L+  + SE  + V  G +KYADLS +R  DY+F++D ML   G
Sbjct: 400  SITRAAAKLAE--RESDLSDEDRSEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLSFEG 457

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
             TA YL YAYTR+ SI R +G+++  L+       VS+   +E  LA  LL++ +VL L+
Sbjct: 458  ATAPYLQYAYTRVRSIFRKSGVDAASLK-----ANVSIIEPQEKTLALKLLQLEEVLDLM 512

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
              +   H LC YLY++++ +  FY+ C  ++   EG   +V   RL+L    A  ++   
Sbjct: 513  INEATPHVLCGYLYELASLYMTFYEACPVLK---EGVEPSVRDSRLVLCNLVADTLRTGL 569

Query: 1062 DILNI 1066
            D+L I
Sbjct: 570  DLLGI 574



 Score =  213 bits (541), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/363 (36%), Positives = 197/363 (54%), Gaps = 33/363 (9%)

Query: 85  MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           M++R  L +    A+  A  PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1   MNIRTILVEKAIAAMTAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKMK--- 52

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
              NP ++AQ I   +         ++ + +K E+A PGF+N+ L   +  + ++    N
Sbjct: 53  --SNPRELAQKIIDQL--------DVSDIAEKTEIAGPGFINIHLKPEFLAQSVQ--AAN 100

Query: 204 GVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
                 +N   K  +V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  VVR NH+
Sbjct: 101 NHAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHM 160

Query: 261 GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           GDWGTQFGMLIAHL+DK    +   +  +ADL+ FY+++KKRFD++E F  +A   VV L
Sbjct: 161 GDWGTQFGMLIAHLEDKINQGVDLDTVALADLETFYRDAKKRFDDEEGFADKARNYVVKL 220

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 376
           Q  D   +K W++    S +  +++Y RLNVTLT      ES Y   +  ++  L+ K +
Sbjct: 221 QGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNI 280

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
                G ++++      +D       + KS GGF Y T+DLAA   R  +  A+ I+   
Sbjct: 281 AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 432 DHR 434
           D R
Sbjct: 341 DAR 343



 Score =  213 bits (541), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/363 (36%), Positives = 197/363 (54%), Gaps = 33/363 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            M++R  L +    A+  A  PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1    MNIRTILVEKAIAAMTAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKMK--- 52

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
               NP ++AQ I   +         ++ + +K E+A PGF+N+ L   +  + ++    N
Sbjct: 53   --SNPRELAQKIIDQL--------DVSDIAEKTEIAGPGFINIHLKPEFLAQSVQ--AAN 100

Query: 1221 GVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
                  +N   K  +V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  VVR NH+
Sbjct: 101  NHAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHM 160

Query: 1278 GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            GDWGTQFGMLIAHL+DK    +   +  +ADL+ FY+++KKRFD++E F  +A   VV L
Sbjct: 161  GDWGTQFGMLIAHLEDKINQGVDLDTVALADLETFYRDAKKRFDDEEGFADKARNYVVKL 220

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 1393
            Q  D   +K W++    S +  +++Y RLNVTLT      ES Y   +  ++  L+ K +
Sbjct: 221  QGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNI 280

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
                 G ++++      +D       + KS GGF Y T+DLAA   R  +  A+ I+   
Sbjct: 281  AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 1449 DHR 1451
            D R
Sbjct: 341  DAR 343


>gi|145297303|ref|YP_001140144.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
            A449]
 gi|418362057|ref|ZP_12962701.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
            01-B526]
 gi|142850075|gb|ABO88396.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
            A449]
 gi|356686692|gb|EHI51285.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
            01-B526]
          Length = 581

 Score =  371 bits (952), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 226/565 (40%), Positives = 318/565 (56%), Gaps = 39/565 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K       +KNP ++A +I          N   + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIE--------NLPASDLIAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDQRWLAGQVETMVTSANANVKLPTPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 694
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMALKDLEAFYTQAKRCYDE 206

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 751
            DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 803
              + ++V  L+ KGL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
              + R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D +
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYV-PESVPLEHHAFGMMLGKDGR 382

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             +KTRSG TVKL +LL+E   R+   L+ +N  ++L+  E +    A+A G +KYADLS 
Sbjct: 383  PYKTRSGGTVKLVDLLNEAEERATALLESRN--SDLSAEEKANVVNAIAMGAVKYADLSK 440

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DY+F +D ML   GNTA YL YAYTRI SI R A I++  L        V+L  E 
Sbjct: 441  NRTTDYIFDWDMMLSFEGNTAPYLQYAYTRIQSIFRKANIDASTL-----IGNVTLNEEA 495

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA+ L++ +D +  V      H LC YLY++S  F  FY+ C  I KD  G  +   
Sbjct: 496  EEVLAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFYEAC-PINKD--GVDEATR 552

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RLLL  ATAKV+K    +L I T
Sbjct: 553  QSRLLLCTATAKVLKLGLGVLGIHT 577



 Score =  228 bits (580), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/329 (39%), Positives = 188/329 (57%), Gaps = 28/329 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K       +KNP ++A +I          N   + +I K+E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PARKNPRELAAAIIE--------NLPASDLIAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88  NFFFDQRWLAGQVETMVTSANANVKLPTPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148 RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMALKDLEAFYTQAKRCYDE 206

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 361
           DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 413
             + ++V  L+ KGL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267 DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
             + R E   AD ++Y  D R +  ++QA
Sbjct: 324 CAKYRYETLGADRVMYFIDSRQHQHLMQA 352



 Score =  226 bits (576), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 128/328 (39%), Positives = 187/328 (57%), Gaps = 28/328 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K       +KNP ++A +I          N   + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PARKNPRELAAAIIE--------NLPASDLIAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDQRWLAGQVETMVTSANANVKLPTPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            R LE+LGH VVR NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVVRANHIGDWGTQFGMLIAYLE-KMANEHASDMALKDLEAFYTQAKRCYDE 206

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 1378
            DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
              + ++V  L+ KGL    +G  +++        GE  G I   I KSDGGF Y T+D+A
Sbjct: 267  DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEPMGVI---IQKSDGGFLYTTTDIA 323

Query: 1431 AIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
              + R E   AD ++Y  D R +  ++Q
Sbjct: 324  CAKYRYETLGADRVMYFIDSRQHQHLMQ 351


>gi|261210003|ref|ZP_05924302.1| arginyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840949|gb|EEX67486.1| arginyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 592

 Score =  371 bits (952), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 223/567 (39%), Positives = 323/567 (56%), Gaps = 39/567 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 96

Query: 573  FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+FLS  +   Q +  + +   GV P        ++ D+S+PN+AKEMHVGHLRSTII
Sbjct: 97   FINIFLSEEFLAAQAEAALADERLGVAPEAPKT---IVADYSAPNVAKEMHVGHLRSTII 153

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESK
Sbjct: 154  GDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESK 213

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 746
            K +DEDE F + A   VV LQ  D      W+ + DV+    Q+ YDRLNV+LT     G
Sbjct: 214  KLYDEDEQFAETARNYVVKLQGGDAFCLDMWKKLVDVTMIQNQRNYDRLNVSLTRENVMG 273

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 801
            ES Y   +  +V  L+ KGL   DDG ++++ +   ++   PM ++  K DGGF Y T+D
Sbjct: 274  ESMYNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFKNKDGEPMGVIVQKRDGGFLYTTTD 333

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            +A  + R E   AD ++Y  D  Q  H        +KAG + P +  ++   FG++LG+D
Sbjct: 334  IACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYI-PEEVSLEHHAFGMMLGKD 392

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR+G TV+L++LLDE   R+   ++ KN   EL+  E +     VA   +KYADL
Sbjct: 393  GRPFKTRAGGTVRLADLLDEAEDRAKALIESKN--PELSAEEKANIANTVAMAAVKYADL 450

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DYVF +D ML   GNTA Y+ YAYTR+AS+   AG++  +L     +  + +  
Sbjct: 451  SKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNEL-----AGHIQITE 505

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            EKE AL   LL+  + +  V R+   H +C YL++++  FS FY+ C  +  + E    +
Sbjct: 506  EKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQE----S 561

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
            V   RL LA  TAK +K+   +L I T
Sbjct: 562  VKQSRLKLAALTAKTIKQGLALLGIDT 588



 Score =  233 bits (593), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 192/331 (58%), Gaps = 27/331 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50  QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 96

Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+FLS  +   Q +  + +   GV P        ++ D+S+PN+AKEMHVGHLRSTII
Sbjct: 97  FINIFLSEEFLAAQAEAALADERLGVAPEAPKT---IVADYSAPNVAKEMHVGHLRSTII 153

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESK
Sbjct: 154 GDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESK 213

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 356
           K +DEDE F + A   VV LQ  D      W+ + DV+    Q+ YDRLNV+LT     G
Sbjct: 214 KLYDEDEQFAETARNYVVKLQGGDAFCLDMWKKLVDVTMIQNQRNYDRLNVSLTRENVMG 273

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 411
           ES Y   +  +V  L+ KGL   DDG ++++ +   ++   PM ++  K DGGF Y T+D
Sbjct: 274 ESMYNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFKNKDGEPMGVIVQKRDGGFLYTTTD 333

Query: 412 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
           +A  + R E   AD ++Y  D R +  ++QA
Sbjct: 334 IACAKYRYETLGADRVLYFIDSRQHQHLMQA 364



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 191/330 (57%), Gaps = 27/330 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  M   K         NP + AQ +  V+        +L  +  K E+A PG
Sbjct: 50   QFGDYQANGIMGAAKQLG-----TNPREFAQKVLDVL--------NLEGIASKTEIAGPG 96

Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+FLS  +   Q +  + +   GV P        ++ D+S+PN+AKEMHVGHLRSTII
Sbjct: 97   FINIFLSEEFLAAQAEAALADERLGVAPEAPKT---IVADYSAPNVAKEMHVGHLRSTII 153

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD + R LE+LGH+V+R NH+GDWGTQFGMLIA+L+         S  ++DL+AFY+ESK
Sbjct: 154  GDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESK 213

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---G 1373
            K +DEDE F + A   VV LQ  D      W+ + DV+    Q+ YDRLNV+LT     G
Sbjct: 214  KLYDEDEQFAETARNYVVKLQGGDAFCLDMWKKLVDVTMIQNQRNYDRLNVSLTRENVMG 273

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSD 1428
            ES Y   +  +V  L+ KGL   DDG ++++ +   ++   PM ++  K DGGF Y T+D
Sbjct: 274  ESMYNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFKNKDGEPMGVIVQKRDGGFLYTTTD 333

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            +A  + R E   AD ++Y  D R +  ++Q
Sbjct: 334  IACAKYRYETLGADRVLYFIDSRQHQHLMQ 363


>gi|71282384|ref|YP_267854.1| arginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|109894983|sp|Q487B1.1|SYR_COLP3 RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|71148124|gb|AAZ28597.1| arginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 582

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 234/611 (38%), Positives = 340/611 (55%), Gaps = 50/611 (8%)

Query: 475  MSVRDYLSDVFTHA-VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            M++++ LS+  + A V    PE  +   S+++       +FGD+Q N  M   K  K   
Sbjct: 1    MNIKNILSERVSAAMVAAGLPEGTNPAISLSNR-----PQFGDYQANGVMGAAKKLK--- 52

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
               NP    + +A+ V +EL     L  +  KIE+A PGF+N+ L   +   Q+ ++  +
Sbjct: 53   --TNP----RELATKVVAEL----DLDGIASKIELAGPGFINIHLDESWLAAQLNEVAQD 102

Query: 594  --------GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 645
                    G  P   ++   V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+
Sbjct: 103  DFIGVAQRGTTPG--DESQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRALEFRGDKVI 160

Query: 646  RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 705
            R NH+GDWGTQFGMLIAHL DK          +ADL+ FY+E+K RFD +E F  RA   
Sbjct: 161  RQNHMGDWGTQFGMLIAHLSDKLASDEVAETALADLENFYREAKVRFDNEEGFADRARAD 220

Query: 706  VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLE 762
            VV LQ  D    K W+   D+S    ++IY +LNV+L      GES Y   +  +V  L 
Sbjct: 221  VVKLQSGDEACAKLWQQFIDISITHSEEIYAKLNVSLKRSDIMGESAYNDDLSTVVDELM 280

Query: 763  KKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWI 817
             K + E   G K+++        G  P+ IV KS GGF Y T+DL+A R R  +  A+ I
Sbjct: 281  AKKIAEESQGAKVVFINEMANKDGEAPVFIVQKSGGGFLYATTDLSACRYRSGKLAANRI 340

Query: 818  VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
            +  TD  Q +HF+ +E  A+KAG+L P         FG+++G+D K FKTR+G T+KL+E
Sbjct: 341  IIFTDARQALHFKQVEIVARKAGLL-PENVGYQHCPFGMMMGDDGKPFKTRTGGTIKLAE 399

Query: 878  LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
            LLDE + R+   +K+KN   ++T T+L+E  + V  G +K+ADLS NR  DY+F +  ML
Sbjct: 400  LLDESIVRAAALIKEKN--PDITDTDLTEISKKVGIGAVKFADLSKNRTSDYIFDWKTML 457

Query: 938  DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
               G TA YL YAY+RI SI   AG    D         +++   +E ALA  LL++ DV
Sbjct: 458  SFEGATAPYLQYAYSRIQSIFSKAGTVKND-------AVINIIEPQEKALALKLLQLEDV 510

Query: 998  LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
            +  V  +   + LC YLY++++ +  FY+ C  +++   G++K     RL L    A  +
Sbjct: 511  VDAVISECTPNLLCNYLYELASLYMSFYEACPILKEGISGEVK---ASRLALCNVVADTL 567

Query: 1058 KKCFDILNIRT 1068
            K+  DIL I T
Sbjct: 568  KQGLDILGIET 578



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/367 (38%), Positives = 199/367 (54%), Gaps = 37/367 (10%)

Query: 85  MSVRDYLSDVFTHA-VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           M++++ LS+  + A V    PE  +   S+++       +FGD+Q N  M   K  K   
Sbjct: 1   MNIKNILSERVSAAMVAAGLPEGTNPAISLSNR-----PQFGDYQANGVMGAAKKLK--- 52

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
              NP    + +A+ V +EL     L  +  KIE+A PGF+N+ L   +   Q+ ++  +
Sbjct: 53  --TNP----RELATKVVAEL----DLDGIASKIELAGPGFINIHLDESWLAAQLNEVAQD 102

Query: 204 --------GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 255
                   G  P   ++   V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+
Sbjct: 103 DFIGVAQRGTTPG--DESQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRALEFRGDKVI 160

Query: 256 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 315
           R NH+GDWGTQFGMLIAHL DK          +ADL+ FY+E+K RFD +E F  RA   
Sbjct: 161 RQNHMGDWGTQFGMLIAHLSDKLASDEVAETALADLENFYREAKVRFDNEEGFADRARAD 220

Query: 316 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLE 372
           VV LQ  D    K W+   D+S    ++IY +LNV+L      GES Y   +  +V  L 
Sbjct: 221 VVKLQSGDEACAKLWQQFIDISITHSEEIYAKLNVSLKRSDIMGESAYNDDLSTVVDELM 280

Query: 373 KKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWI 427
            K + E   G K+++        G  P+ IV KS GGF Y T+DL+A R R  +  A+ I
Sbjct: 281 AKKIAEESQGAKVVFINEMANKDGEAPVFIVQKSGGGFLYATTDLSACRYRSGKLAANRI 340

Query: 428 VYVTDHR 434
           +  TD R
Sbjct: 341 IIFTDAR 347



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/367 (38%), Positives = 199/367 (54%), Gaps = 37/367 (10%)

Query: 1102 MSVRDYLSDVFTHA-VQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            M++++ LS+  + A V    PE  +   S+++       +FGD+Q N  M   K  K   
Sbjct: 1    MNIKNILSERVSAAMVAAGLPEGTNPAISLSNR-----PQFGDYQANGVMGAAKKLK--- 52

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
               NP    + +A+ V +EL     L  +  KIE+A PGF+N+ L   +   Q+ ++  +
Sbjct: 53   --TNP----RELATKVVAEL----DLDGIASKIELAGPGFINIHLDESWLAAQLNEVAQD 102

Query: 1221 --------GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVV 1272
                    G  P   ++   V+VD+S+PN+AKEMHVGHLRSTIIGD + R LE+ G  V+
Sbjct: 103  DFIGVAQRGTTPG--DESQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRALEFRGDKVI 160

Query: 1273 RLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQC 1332
            R NH+GDWGTQFGMLIAHL DK          +ADL+ FY+E+K RFD +E F  RA   
Sbjct: 161  RQNHMGDWGTQFGMLIAHLSDKLASDEVAETALADLENFYREAKVRFDNEEGFADRARAD 220

Query: 1333 VVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLE 1389
            VV LQ  D    K W+   D+S    ++IY +LNV+L      GES Y   +  +V  L 
Sbjct: 221  VVKLQSGDEACAKLWQQFIDISITHSEEIYAKLNVSLKRSDIMGESAYNDDLSTVVDELM 280

Query: 1390 KKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
             K + E   G K+++        G  P+ IV KS GGF Y T+DL+A R R  +  A+ I
Sbjct: 281  AKKIAEESQGAKVVFINEMANKDGEAPVFIVQKSGGGFLYATTDLSACRYRSGKLAANRI 340

Query: 1445 VYVTDHR 1451
            +  TD R
Sbjct: 341  IIFTDAR 347


>gi|85711525|ref|ZP_01042583.1| arginyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694677|gb|EAQ32617.1| arginyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 580

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 218/565 (38%), Positives = 321/565 (56%), Gaps = 40/565 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N A+ L K       K NP  +A+ +   + +          +I K ++A PGF+
Sbjct: 41   GDFASNLALMLAK-----PAKMNPRQLAEKVIEAIPAN--------TLIAKTDIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N  +++     Q+  ++ +   G+QP    K + +++D+SSPN+AKEMHVGHLRS IIGD
Sbjct: 88   NFTIAQDQLKSQLTTMLSSADLGIQPA--EKPMTIVIDYSSPNLAKEMHVGHLRSAIIGD 145

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
             +SR  E LGH V+R NHVGDWGTQFGML+AH+++   D    +  +++L+ FYK +KKR
Sbjct: 146  AVSRTAEMLGHKVIRQNHVGDWGTQFGMLLAHMEEL--DSEAANYELSNLETFYKAAKKR 203

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 748
            FDE E F +RA + VV LQ  D    K W    DVS    Q++YDRL V LT      ES
Sbjct: 204  FDESEDFAERARELVVKLQSGDDYCLKLWNQFIDVSLAHCQEVYDRLGVKLTRDDVMAES 263

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 803
             Y   +  ++ +L+++GLL  D G + ++     G++   +P+ + K  GG+ Y T+DLA
Sbjct: 264  AYNDRLPGVIEHLKQQGLLVEDQGAQCVFLDEFKGKEGEPLPIIVQKKGGGYLYATTDLA 323

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
            AI+ R +E   D+++Y  D  Q +HF  +   A+KA  +  +  +    GFG V+G+D +
Sbjct: 324  AIQYRQKELGGDYLMYFVDARQSLHFEQIFTLARKAKFIEGD-IKTQHYGFGTVMGKDGR 382

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             +K+R G   KL++LLDE  RR+L+ L+ KN  ++LT  +     + V    +KYADLS 
Sbjct: 383  PYKSRDGGVTKLADLLDEAERRALELLQQKN--SDLTAEQQEAVAKVVGISSVKYADLSK 440

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DY+F +D ML   GNTA YLLYA+TR+ SI    G  S D+          LE E+
Sbjct: 441  NRTSDYIFDWDLMLTFEGNTAPYLLYAFTRVNSIFDKLGERSFDM-----DADWLLEDER 495

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E ALA  L+R  +V+  V      H LC YL++++  FS FY+ C  + ++ E     V 
Sbjct: 496  ELALANQLIRFEEVVNRVFDKAMPHFLCGYLFELAGYFSSFYEACPILNQEDEA----VR 551

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL LA  TA  ++K   +L I T
Sbjct: 552  NSRLKLARLTANTLEKGLALLGIPT 576



 Score =  230 bits (587), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/403 (35%), Positives = 215/403 (53%), Gaps = 31/403 (7%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N A+ L K       K NP  +A+ +   + +          +I K ++A PGF+
Sbjct: 41  GDFASNLALMLAK-----PAKMNPRQLAEKVIEAIPAN--------TLIAKTDIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N  +++     Q+  ++ +   G+QP    K + +++D+SSPN+AKEMHVGHLRS IIGD
Sbjct: 88  NFTIAQDQLKSQLTTMLSSADLGIQPA--EKPMTIVIDYSSPNLAKEMHVGHLRSAIIGD 145

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
            +SR  E LGH V+R NHVGDWGTQFGML+AH+++   D    +  +++L+ FYK +KKR
Sbjct: 146 AVSRTAEMLGHKVIRQNHVGDWGTQFGMLLAHMEEL--DSEAANYELSNLETFYKAAKKR 203

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 358
           FDE E F +RA + VV LQ  D    K W    DVS    Q++YDRL V LT      ES
Sbjct: 204 FDESEDFAERARELVVKLQSGDDYCLKLWNQFIDVSLAHCQEVYDRLGVKLTRDDVMAES 263

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 413
            Y   +  ++ +L+++GLL  D G + ++     G++   +P+ + K  GG+ Y T+DLA
Sbjct: 264 AYNDRLPGVIEHLKQQGLLVEDQGAQCVFLDEFKGKEGEPLPIIVQKKGGGYLYATTDLA 323

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---P 470
           AI+ R +E   D+++Y  D R      Q      K + I     +Q  G    M     P
Sbjct: 324 AIQYRQKELGGDYLMYFVDARQSLHFEQIFTLARKAKFIEGDIKTQHYGFGTVMGKDGRP 383

Query: 471 VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 513
            + R      L+D+   A + A   L  K + + +  ++ V K
Sbjct: 384 YKSRDGGVTKLADLLDEAERRALELLQQKNSDLTAEQQEAVAK 426



 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/321 (39%), Positives = 188/321 (58%), Gaps = 28/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N A+ L K       K NP  +A+ +   + +          +I K ++A PGF+
Sbjct: 41   GDFASNLALMLAK-----PAKMNPRQLAEKVIEAIPAN--------TLIAKTDIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N  +++     Q+  ++ +   G+QP    K + +++D+SSPN+AKEMHVGHLRS IIGD
Sbjct: 88   NFTIAQDQLKSQLTTMLSSADLGIQPA--EKPMTIVIDYSSPNLAKEMHVGHLRSAIIGD 145

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
             +SR  E LGH V+R NHVGDWGTQFGML+AH+++   D    +  +++L+ FYK +KKR
Sbjct: 146  AVSRTAEMLGHKVIRQNHVGDWGTQFGMLLAHMEEL--DSEAANYELSNLETFYKAAKKR 203

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 1375
            FDE E F +RA + VV LQ  D    K W    DVS    Q++YDRL V LT      ES
Sbjct: 204  FDESEDFAERARELVVKLQSGDDYCLKLWNQFIDVSLAHCQEVYDRLGVKLTRDDVMAES 263

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
             Y   +  ++ +L+++GLL  D G + ++     G++   +P+ + K  GG+ Y T+DLA
Sbjct: 264  AYNDRLPGVIEHLKQQGLLVEDQGAQCVFLDEFKGKEGEPLPIIVQKKGGGYLYATTDLA 323

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
            AI+ R +E   D+++Y  D R
Sbjct: 324  AIQYRQKELGGDYLMYFVDAR 344


>gi|398879215|ref|ZP_10634315.1| arginyl-tRNA synthetase [Pseudomonas sp. GM67]
 gi|398197172|gb|EJM84157.1| arginyl-tRNA synthetase [Pseudomonas sp. GM67]
          Length = 626

 Score =  370 bits (951), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 234/599 (39%), Positives = 331/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 52   TIRQLIQQAITQLVNEGVLPEGLTPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 105

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A    +
Sbjct: 106  K--PRDLAEKIIAALPAD--------ENVTKTEIAGPGFLNFFQNTDALATRLDAALADE 155

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 156  HIGVRKAGPAQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 210

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+        S  ++DL+ FY+ +K RFDE E F  RA   VV 
Sbjct: 211  HVGDWGTQFGMLMAYLQEN----PITSDELSDLENFYRAAKGRFDESEEFADRARGLVVK 266

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 267  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 326

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 327  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 386

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 387  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 445

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+ + +K+KN   EL   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 446  EAQERAYNLVKEKN--PELAEDELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 503

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  ++L  
Sbjct: 504  GNTAPYLLYAYTRVAGVFRKLGKDFSEVE-----GQIVLEAAHEHELAAKLAQFGEILNN 558

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  +   ++++    RL LA  T + +K+
Sbjct: 559  VSEKGTPHILCTYLYDVAGLFSSFYENCPILSAETPAQMQS----RLRLAALTGRTLKQ 613



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 158/446 (35%), Positives = 225/446 (50%), Gaps = 43/446 (9%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 52  TIRQLIQQAITQLVNEGVLPEGLTPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 105

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A    +
Sbjct: 106 K--PRDLAEKIIAALPAD--------ENVTKTEIAGPGFLNFFQNTDALATRLDAALADE 155

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 156 HIGVRKAGPAQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 210

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+        S  ++DL+ FY+ +K RFDE E F  RA   VV 
Sbjct: 211 HVGDWGTQFGMLMAYLQEN----PITSDELSDLENFYRAAKGRFDESEEFADRARGLVVK 266

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 267 LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 326

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 327 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 386

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTH 487
            D R      Q  A   K   ++     +  G          P + R      L D+ T 
Sbjct: 387 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTE 446

Query: 488 AVQVAFPELGDKTASVASTNEKYVHK 513
           A + A+  + +K   +A    + + K
Sbjct: 447 AQERAYNLVKEKNPELAEDELRNIAK 472



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 199/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 52   TIRQLIQQAITQLVNEGVLPEGLTPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 105

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A    +
Sbjct: 106  K--PRDLAEKIIAALPAD--------ENVTKTEIAGPGFLNFFQNTDALATRLDAALADE 155

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 156  HIGVRKAGPAQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 210

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+        S  ++DL+ FY+ +K RFDE E F  RA   VV 
Sbjct: 211  HVGDWGTQFGMLMAYLQEN----PITSDELSDLENFYRAAKGRFDESEEFADRARGLVVK 266

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 267  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 326

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 327  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 386

Query: 1448 TDHR 1451
             D R
Sbjct: 387  VDQR 390


>gi|410622346|ref|ZP_11333183.1| arginyl-tRNA synthetase [Glaciecola pallidula DSM 14239 = ACAM 615]
 gi|410158091|dbj|GAC28557.1| arginyl-tRNA synthetase [Glaciecola pallidula DSM 14239 = ACAM 615]
          Length = 577

 Score =  370 bits (951), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 333/602 (55%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++ + LS  F+HA+Q     +G   A +  +       FG++Q N AMAL K  K K  
Sbjct: 1    MNIHNLLSARFSHAIQA----MGIDDARIPLSRSTRP-DFGEYQFNGAMALAKQLKQK-- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P DIA+ I +        N  L  +  K+EVA PGF+N++L   +     +  + + 
Sbjct: 54   ---PRDIAEQILA--------NVKLDDIASKLEVAGPGFINIYLKDEWLSAWCERALQDK 102

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                  ++   ++VD+SSPN+AKEMHVGHLRSTIIGD +  +LEYLGH V+R NH+GDWG
Sbjct: 103  KLTIEAHESKTIVVDYSSPNLAKEMHVGHLRSTIIGDAVVNVLEYLGHKVIRQNHMGDWG 162

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGML+AHL DK          ++DL+ FY+E+K RFD ++ F  RA   VV LQ  D 
Sbjct: 163  TQFGMLLAHLNDKLQKSSFAETALSDLEDFYREAKVRFDNEDGFADRARDYVVQLQSGDS 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
                 W+   D+S +  + +Y +LNV+L      GES Y   +  ++  L +KG+     
Sbjct: 223  ACLALWQQFIDISIQHSEDVYKKLNVSLKREHIMGESSYNHDLANVLSDLTEKGIAVECQ 282

Query: 772  GRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G K+++  +     G   + IV KS GG+ Y T+DLAAIR R  + KA   +  TD  Q 
Sbjct: 283  GAKVVFMPEMINKEGEPAVYIVQKSGGGYLYATTDLAAIRYRASQLKAQRTLIFTDARQA 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
            +HF+  E  A+KAG L+ N +  +   FG++LG+D K F+TRSG T+KLS+LLDE + R+
Sbjct: 343  LHFKQTEIVARKAGYLSANDS-YEHCPFGMMLGKDNKPFRTRSGQTIKLSDLLDEAIERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
               +    R + L+ +      + V  G +KYADLS NR  DY+F ++ ML   GNTA Y
Sbjct: 402  --AVLISQRESGLSISAKQHVAETVGIGAVKYADLSKNRTTDYIFDWNTMLSFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            L YAYTR+ SI R A     D   AA S     EH+    L   L++ ++VL  V ++  
Sbjct: 460  LQYAYTRVKSIFRNAQ-QDMDTYFAAVSVVSIQEHD----LVVKLMQFDEVLESVCKEAT 514

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H +C YLY++++ F  FY+    ++ +   K +     RL L   TAK +K   DIL I
Sbjct: 515  PHIMCAYLYEVASLFMRFYEANPVLKPEVGEKDR---NSRLGLCALTAKTLKAGLDILGI 571

Query: 1067 RT 1068
             T
Sbjct: 572  DT 573



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/441 (35%), Positives = 231/441 (52%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++ + LS  F+HA+Q     +G   A +  +       FG++Q N AMAL K  K K  
Sbjct: 1   MNIHNLLSARFSHAIQA----MGIDDARIPLSRSTRP-DFGEYQFNGAMALAKQLKQK-- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P DIA+ I +        N  L  +  K+EVA PGF+N++L   +     +  + + 
Sbjct: 54  ---PRDIAEQILA--------NVKLDDIASKLEVAGPGFINIYLKDEWLSAWCERALQDK 102

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                 ++   ++VD+SSPN+AKEMHVGHLRSTIIGD +  +LEYLGH V+R NH+GDWG
Sbjct: 103 KLTIEAHESKTIVVDYSSPNLAKEMHVGHLRSTIIGDAVVNVLEYLGHKVIRQNHMGDWG 162

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGML+AHL DK          ++DL+ FY+E+K RFD ++ F  RA   VV LQ  D 
Sbjct: 163 TQFGMLLAHLNDKLQKSSFAETALSDLEDFYREAKVRFDNEDGFADRARDYVVQLQSGDS 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
                W+   D+S +  + +Y +LNV+L      GES Y   +  ++  L +KG+     
Sbjct: 223 ACLALWQQFIDISIQHSEDVYKKLNVSLKREHIMGESSYNHDLANVLSDLTEKGIAVECQ 282

Query: 382 GRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G K+++  +     G   + IV KS GG+ Y T+DLAAIR R  + KA   +  TD R  
Sbjct: 283 GAKVVFMPEMINKEGEPAVYIVQKSGGGYLYATTDLAAIRYRASQLKAQRTLIFTDAR-- 340

Query: 437 HQVLQAIAEE--EKKQGISSSSSSQTKGTAKKM----NVPVRDRMSVRDYLSDVFTHAVQ 490
            Q L     E   +K G  S++ S        M    N P R R      LSD+   A++
Sbjct: 341 -QALHFKQTEIVARKAGYLSANDSYEHCPFGMMLGKDNKPFRTRSGQTIKLSDLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   +  + + ++ + +++V
Sbjct: 400 RAAVLISQRESGLSISAKQHV 420



 Score =  227 bits (578), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 138/358 (38%), Positives = 198/358 (55%), Gaps = 26/358 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++ + LS  F+HA+Q     +G   A +  +       FG++Q N AMAL K  K K  
Sbjct: 1    MNIHNLLSARFSHAIQA----MGIDDARIPLSRSTRP-DFGEYQFNGAMALAKQLKQK-- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P DIA+ I +        N  L  +  K+EVA PGF+N++L   +     +  + + 
Sbjct: 54   ---PRDIAEQILA--------NVKLDDIASKLEVAGPGFINIYLKDEWLSAWCERALQDK 102

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                  ++   ++VD+SSPN+AKEMHVGHLRSTIIGD +  +LEYLGH V+R NH+GDWG
Sbjct: 103  KLTIEAHESKTIVVDYSSPNLAKEMHVGHLRSTIIGDAVVNVLEYLGHKVIRQNHMGDWG 162

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGML+AHL DK          ++DL+ FY+E+K RFD ++ F  RA   VV LQ  D 
Sbjct: 163  TQFGMLLAHLNDKLQKSSFAETALSDLEDFYREAKVRFDNEDGFADRARDYVVQLQSGDS 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
                 W+   D+S +  + +Y +LNV+L      GES Y   +  ++  L +KG+     
Sbjct: 223  ACLALWQQFIDISIQHSEDVYKKLNVSLKREHIMGESSYNHDLANVLSDLTEKGIAVECQ 282

Query: 1399 GRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            G K+++  +     G   + IV KS GG+ Y T+DLAAIR R  + KA   +  TD R
Sbjct: 283  GAKVVFMPEMINKEGEPAVYIVQKSGGGYLYATTDLAAIRYRASQLKAQRTLIFTDAR 340


>gi|225024090|ref|ZP_03713282.1| hypothetical protein EIKCOROL_00958 [Eikenella corrodens ATCC 23834]
 gi|224943115|gb|EEG24324.1| hypothetical protein EIKCOROL_00958 [Eikenella corrodens ATCC 23834]
          Length = 572

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 224/571 (39%), Positives = 320/571 (56%), Gaps = 51/571 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGDFQ N  M   K       K+NP ++AQ +A  + +        +++I   EVA PG
Sbjct: 34   EFGDFQINGVMGAAK-----QRKQNPRELAQKVADALAN--------SELIASAEVAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 625
            F+N+ L+  +  +Q+          +     P T      +++D+SSPN+AKEMHVGHLR
Sbjct: 81   FINLRLNPQFLAKQVHAALQSSRLGVAQAAAPQT------IIIDYSSPNLAKEMHVGHLR 134

Query: 626  STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 685
            S+IIGD+++R+  +LGH V+  NHVGDWGTQFGML+A+L ++      +   +ADL+ FY
Sbjct: 135  SSIIGDSLNRVHSFLGHRVIAQNHVGDWGTQFGMLVAYLVEQQAQ--NEHFELADLEQFY 192

Query: 686  KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER 745
            + +K RFDED  F   A + VV LQ  D      W    ++S +  +K+Y +L + LT  
Sbjct: 193  RNAKVRFDEDPAFADTAREYVVKLQSGDEAVLALWRQFVEISLQHAEKVYAKLGLLLTRE 252

Query: 746  ---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTY 797
               GES Y   ++ +V  L  KGL   DDG K+++ ++     G     IV K  GGF Y
Sbjct: 253  DVAGESKYNDDLQPVVNDLIAKGLAVEDDGAKVVFLDEFKNKEGEPAAYIVQKKGGGFLY 312

Query: 798  DTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
             T+DLA IR  +   K + ++YV D  QG+HF  L   ++ AG L P   + +F+GFG +
Sbjct: 313  STTDLACIRDYVGRLKGNRLLYVVDHRQGLHFGQLFATSRLAGYL-PENVKAEFIGFGTM 371

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIK 917
            +G+D K FKTRSGDTVKL ELLDE + R+   +K+KN   EL     ++  ++V  G +K
Sbjct: 372  MGKDGKPFKTRSGDTVKLVELLDEAVERATALVKEKN--PELDDATAAQIGRSVGIGAVK 429

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
            YADLS NR  DY+F +D ML   GNTA YL YAYTR+ S+ + AG  S          PV
Sbjct: 430  YADLSKNRTSDYIFDWDNMLSFEGNTAPYLQYAYTRVQSVLKKAGEWSRT------EQPV 483

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1037
              E   E  LA  LL+  DVL  V      H+L  YLY +++ FS FY+ C  ++  AEG
Sbjct: 484  FTE-PLECQLAAELLKFEDVLQTVADSSYPHYLAAYLYQVASLFSRFYEACPILK--AEG 540

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             ++     RL LA  T + ++    +L I T
Sbjct: 541  SVRNT---RLQLAALTGQTLQTGLSLLGIDT 568



 Score =  212 bits (540), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/405 (34%), Positives = 208/405 (51%), Gaps = 46/405 (11%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGDFQ N  M   K       K+NP ++AQ +A  + +        +++I   EVA PG
Sbjct: 34  EFGDFQINGVMGAAK-----QRKQNPRELAQKVADALAN--------SELIASAEVAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 235
           F+N+ L+  +  +Q+          +     P T      +++D+SSPN+AKEMHVGHLR
Sbjct: 81  FINLRLNPQFLAKQVHAALQSSRLGVAQAAAPQT------IIIDYSSPNLAKEMHVGHLR 134

Query: 236 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 295
           S+IIGD+++R+  +LGH V+  NHVGDWGTQFGML+A+L ++      +   +ADL+ FY
Sbjct: 135 SSIIGDSLNRVHSFLGHRVIAQNHVGDWGTQFGMLVAYLVEQQAQ--NEHFELADLEQFY 192

Query: 296 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER 355
           + +K RFDED  F   A + VV LQ  D      W    ++S +  +K+Y +L + LT  
Sbjct: 193 RNAKVRFDEDPAFADTAREYVVKLQSGDEAVLALWRQFVEISLQHAEKVYAKLGLLLTRE 252

Query: 356 ---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTY 407
              GES Y   ++ +V  L  KGL   DDG K+++ ++     G     IV K  GGF Y
Sbjct: 253 DVAGESKYNDDLQPVVNDLIAKGLAVEDDGAKVVFLDEFKNKEGEPAAYIVQKKGGGFLY 312

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM 467
            T+DLA IR  +   K + ++YV DHR      Q  A       +  +  ++  G    M
Sbjct: 313 STTDLACIRDYVGRLKGNRLLYVVDHRQGLHFGQLFATSRLAGYLPENVKAEFIGFGTMM 372

Query: 468 ---NVPVRDRMSVRDYLSDVFTHAVQVAF-------PELGDKTAS 502
                P + R      L ++   AV+ A        PEL D TA+
Sbjct: 373 GKDGKPFKTRSGDTVKLVELLDEAVERATALVKEKNPELDDATAA 417



 Score =  211 bits (538), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/327 (37%), Positives = 183/327 (55%), Gaps = 36/327 (11%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGDFQ N  M   K       K+NP ++AQ +A  + +        +++I   EVA PG
Sbjct: 34   EFGDFQINGVMGAAK-----QRKQNPRELAQKVADALAN--------SELIASAEVAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDI-------IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 1252
            F+N+ L+  +  +Q+          +     P T      +++D+SSPN+AKEMHVGHLR
Sbjct: 81   FINLRLNPQFLAKQVHAALQSSRLGVAQAAAPQT------IIIDYSSPNLAKEMHVGHLR 134

Query: 1253 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 1312
            S+IIGD+++R+  +LGH V+  NHVGDWGTQFGML+A+L ++      +   +ADL+ FY
Sbjct: 135  SSIIGDSLNRVHSFLGHRVIAQNHVGDWGTQFGMLVAYLVEQQAQ--NEHFELADLEQFY 192

Query: 1313 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER 1372
            + +K RFDED  F   A + VV LQ  D      W    ++S +  +K+Y +L + LT  
Sbjct: 193  RNAKVRFDEDPAFADTAREYVVKLQSGDEAVLALWRQFVEISLQHAEKVYAKLGLLLTRE 252

Query: 1373 ---GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTY 1424
               GES Y   ++ +V  L  KGL   DDG K+++ ++     G     IV K  GGF Y
Sbjct: 253  DVAGESKYNDDLQPVVNDLIAKGLAVEDDGAKVVFLDEFKNKEGEPAAYIVQKKGGGFLY 312

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             T+DLA IR  +   K + ++YV DHR
Sbjct: 313  STTDLACIRDYVGRLKGNRLLYVVDHR 339


>gi|423203752|ref|ZP_17190320.1| arginine-tRNA ligase [Aeromonas veronii AER39]
 gi|404612530|gb|EKB09591.1| arginine-tRNA ligase [Aeromonas veronii AER39]
          Length = 581

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 222/562 (39%), Positives = 321/562 (57%), Gaps = 33/562 (5%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GD   N AM L K        KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PACKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
            N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDQRWLAGQVEAMVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 635  RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 694
            R LE+LGH V+R NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVIRANHIGDWGTQFGMLIAYLE-KMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 695  DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 751
            DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 752  KHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 806
              + ++V  L+ KGL    +G  +++      +D  ++ + I KSDGGF Y T+D+A  +
Sbjct: 267  DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAK 326

Query: 807  QRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFK 866
             R E   AD ++Y  D  Q  H        +KAG + P    ++   FG++LG+D + +K
Sbjct: 327  YRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYV-PESVPLEHHAFGMMLGKDGRPYK 385

Query: 867  TRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRN 926
            TRSG TVKL +LL+E   R+   L+ +N  ++L+  E +    A+A G +KYADLS NR 
Sbjct: 386  TRSGGTVKLVDLLNEAEERAAALLESRN--SDLSAEEKANVVNAIAMGAVKYADLSKNRT 443

Query: 927  LDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFA 986
             DY+F +D ML   GNTA YL YAYTRI SI R A I++E L     +  V+L  E E  
Sbjct: 444  TDYIFDWDLMLSFEGNTAPYLQYAYTRIQSIFRKANIDAETL-----TGNVTLNEEAEEV 498

Query: 987  LAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGR 1046
            LA+ L++ +D +  V      H LC YLY++S  F  FY+ C  I KD  G  +     R
Sbjct: 499  LAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFYEAC-PINKD--GVDEATRQSR 555

Query: 1047 LLLAEATAKVMKKCFDILNIRT 1068
            LLL  ATAKV+K    +L I T
Sbjct: 556  LLLCAATAKVLKLGLGVLGIHT 577



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 189/326 (57%), Gaps = 22/326 (6%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GD   N AM L K        KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41  GDLATNLAMLLAK-----PACKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
           N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88  NFFFDQRWLAGQVEAMVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 304
           R LE+LGH V+R NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148 RALEFLGHKVIRANHIGDWGTQFGMLIAYLE-KMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 361
           DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 362 KHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 416
             + ++V  L+ KGL    +G  +++      +D  ++ + I KSDGGF Y T+D+A  +
Sbjct: 267 DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAK 326

Query: 417 QRIEEEKADWIVYVTDHRSYHQVLQA 442
            R E   AD ++Y  D R +  ++QA
Sbjct: 327 YRYETLGADRVMYFIDSRQHQHLMQA 352



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 188/325 (57%), Gaps = 22/325 (6%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GD   N AM L K        KNP ++A +I   + +        + +I K+E+A PGF+
Sbjct: 41   GDLATNLAMLLAK-----PACKNPRELAAAIIEHLPA--------SDLIAKVEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
            N F  + +   Q++ ++ +      L     V+VD+S+PN+AKEM V H+RST++GD  +
Sbjct: 88   NFFFDQRWLAGQVEAMVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAA 147

Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDE 1321
            R LE+LGH V+R NH+GDWGTQFGMLIA+L+ K  +       + DL+AFY ++K+ +DE
Sbjct: 148  RALEFLGHKVIRANHIGDWGTQFGMLIAYLE-KMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQ 1378
            DE F +RA   VV LQ  D   +  W+ + D++    Q  YDRLNV+LT +   GES Y 
Sbjct: 207  DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYN 266

Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 1433
              + ++V  L+ KGL    +G  +++      +D  ++ + I KSDGGF Y T+D+A  +
Sbjct: 267  DMLPEIVADLKAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAK 326

Query: 1434 QRIEEEKADWIVYVTDHRSYHQVLQ 1458
             R E   AD ++Y  D R +  ++Q
Sbjct: 327  YRYETLGADRVMYFIDSRQHQHLMQ 351


>gi|90416671|ref|ZP_01224601.1| arginyl-tRNA synthetase [gamma proteobacterium HTCC2207]
 gi|90331424|gb|EAS46660.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 579

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 226/601 (37%), Positives = 342/601 (56%), Gaps = 37/601 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M +++ L+  F+ A+Q A   +  + + + + + K   +FGD+Q N AMA  K  K    
Sbjct: 1    MRIKEILNQRFSAAMQAA--GVPSECSPILALSGK--PQFGDYQANGAMAAAKRLK---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI-KDIIVN 593
              NP D+A+ I  +          L  + D++E+A PGF+N+ L   +    +  + +  
Sbjct: 53   -MNPRDLAEKIIQLA--------DLDGIADRLEIAGPGFINIHLCDAFLTASLGTNTLYT 103

Query: 594  GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
              +      + RV+VD+SSPN+AKEMHVGHLRSTIIGD ++R+LEY GH V+R NH+GDW
Sbjct: 104  QSESDLDGTQKRVVVDYSSPNLAKEMHVGHLRSTIIGDAVARVLEYQGHTVLRQNHMGDW 163

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGMLIA L+ +  +       + DL+ FY++SKK FD D  F   A   VV LQ  D
Sbjct: 164  GTQFGMLIAELEQQLSEGEQAELALGDLELFYQQSKKHFDADLEFADTARAYVVKLQSGD 223

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG---ESFYQKHMEQLVPYLEKKGLLELD 770
               +  W+    VS     +IY +LNV LT      ES Y   ++ ++  L  K L    
Sbjct: 224  AHCRGLWQKFIQVSVAHNLEIYAQLNVGLTAEHIMPESAYNDDLQNVLDDLLAKDLALES 283

Query: 771  DGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQ 825
            DG K+++      ++    PM + KS GGF Y TSDLAA+R R+ + +AD I+Y  D  Q
Sbjct: 284  DGAKVVFLDELADKNGNPSPMIVQKSGGGFLYATSDLAAMRYRVGQLQADRILYFIDARQ 343

Query: 826  GVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRR 885
             +H + +   A+KA  ++ +   ++   FG ++G+D + FKTRSG TVKL++LL E + R
Sbjct: 344  SLHMKQVFAAARKADYVS-DAVSLEHHPFGTMMGKDGRPFKTRSGGTVKLADLLVEAVER 402

Query: 886  SLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
            +   L+ KN  T+L   E+S   ++V  G IKYADLS  R  DY+F +D ML   GNTA 
Sbjct: 403  AEQLLRSKN--TDLGEDEISNIARSVGIGAIKYADLSKTRTNDYIFDWDAMLSFEGNTAP 460

Query: 946  YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
            YL YAYTRI SI R AGI++E       S  +S+   +E AL   LL+ ++V+  V  + 
Sbjct: 461  YLQYAYTRIRSIFRKAGISAESF-----SAEISITEHQEKALIMKLLQFDNVVDQVAAEG 515

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILN 1065
              H LC Y+Y++++A+  FY++C  ++ +   +++     RL L + T++ + K  D+L 
Sbjct: 516  YPHILCNYVYELASAYMTFYEHCPVLKDEVPEELQ---KSRLQLCKLTSETIAKGLDLLG 572

Query: 1066 I 1066
            I
Sbjct: 573  I 573



 Score =  229 bits (584), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 149/420 (35%), Positives = 220/420 (52%), Gaps = 29/420 (6%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M +++ L+  F+ A+Q A   +  + + + + + K   +FGD+Q N AMA  K  K    
Sbjct: 1   MRIKEILNQRFSAAMQAA--GVPSECSPILALSGK--PQFGDYQANGAMAAAKRLK---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI-KDIIVN 203
             NP D+A+ I  +          L  + D++E+A PGF+N+ L   +    +  + +  
Sbjct: 53  -MNPRDLAEKIIQLA--------DLDGIADRLEIAGPGFINIHLCDAFLTASLGTNTLYT 103

Query: 204 GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
             +      + RV+VD+SSPN+AKEMHVGHLRSTIIGD ++R+LEY GH V+R NH+GDW
Sbjct: 104 QSESDLDGTQKRVVVDYSSPNLAKEMHVGHLRSTIIGDAVARVLEYQGHTVLRQNHMGDW 163

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           GTQFGMLIA L+ +  +       + DL+ FY++SKK FD D  F   A   VV LQ  D
Sbjct: 164 GTQFGMLIAELEQQLSEGEQAELALGDLELFYQQSKKHFDADLEFADTARAYVVKLQSGD 223

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG---ESFYQKHMEQLVPYLEKKGLLELD 380
              +  W+    VS     +IY +LNV LT      ES Y   ++ ++  L  K L    
Sbjct: 224 AHCRGLWQKFIQVSVAHNLEIYAQLNVGLTAEHIMPESAYNDDLQNVLDDLLAKDLALES 283

Query: 381 DGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRS 435
           DG K+++      ++    PM + KS GGF Y TSDLAA+R R+ + +AD I+Y  D R 
Sbjct: 284 DGAKVVFLDELADKNGNPSPMIVQKSGGGFLYATSDLAAMRYRVGQLQADRILYFIDARQ 343

Query: 436 YHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTHAVQVA 492
              + Q  A   K   +S + S +       M     P + R      L+D+   AV+ A
Sbjct: 344 SLHMKQVFAAARKADYVSDAVSLEHHPFGTMMGKDGRPFKTRSGGTVKLADLLVEAVERA 403



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/359 (37%), Positives = 199/359 (55%), Gaps = 26/359 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M +++ L+  F+ A+Q A   +  + + + + + K   +FGD+Q N AMA  K  K    
Sbjct: 1    MRIKEILNQRFSAAMQAA--GVPSECSPILALSGK--PQFGDYQANGAMAAAKRLK---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI-KDIIVN 1220
              NP D+A+ I  +          L  + D++E+A PGF+N+ L   +    +  + +  
Sbjct: 53   -MNPRDLAEKIIQLA--------DLDGIADRLEIAGPGFINIHLCDAFLTASLGTNTLYT 103

Query: 1221 GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
              +      + RV+VD+SSPN+AKEMHVGHLRSTIIGD ++R+LEY GH V+R NH+GDW
Sbjct: 104  QSESDLDGTQKRVVVDYSSPNLAKEMHVGHLRSTIIGDAVARVLEYQGHTVLRQNHMGDW 163

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            GTQFGMLIA L+ +  +       + DL+ FY++SKK FD D  F   A   VV LQ  D
Sbjct: 164  GTQFGMLIAELEQQLSEGEQAELALGDLELFYQQSKKHFDADLEFADTARAYVVKLQSGD 223

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG---ESFYQKHMEQLVPYLEKKGLLELD 1397
               +  W+    VS     +IY +LNV LT      ES Y   ++ ++  L  K L    
Sbjct: 224  AHCRGLWQKFIQVSVAHNLEIYAQLNVGLTAEHIMPESAYNDDLQNVLDDLLAKDLALES 283

Query: 1398 DGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            DG K+++      ++    PM + KS GGF Y TSDLAA+R R+ + +AD I+Y  D R
Sbjct: 284  DGAKVVFLDELADKNGNPSPMIVQKSGGGFLYATSDLAAMRYRVGQLQADRILYFIDAR 342


>gi|110835103|ref|YP_693962.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123149267|sp|Q0VMA8.1|SYR_ALCBS RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|110648214|emb|CAL17690.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 584

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 224/565 (39%), Positives = 326/565 (57%), Gaps = 40/565 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N A+ L K     G K  P D+A+ + + + ++ A        + K+++A PGF+
Sbjct: 41   GDFATNIALMLAK---PAGMK--PRDLAEKLIAALPNDSA--------VAKVDIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F +  +    +   + +   G+  P   +   V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQADDWLTGLLDSALADDFLGISRP--EQPQTVVVDYSSPNLAKEMHVGHLRSTIIGD 145

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQAFYKESK 689
             + R LE+LGH V+R NHVGDWGTQFGML+A+L+++  +   +  S  +A+L+ FY+ +K
Sbjct: 146  AVVRTLEFLGHTVIRQNHVGDWGTQFGMLLAYLEEQKTEEGERELSRELANLETFYRAAK 205

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            +RFDE + F  RA   VV LQ  D      W     VS    Q IYDRL V+LT     G
Sbjct: 206  QRFDESDSFADRARALVVKLQSGDDYCLTLWAEFNQVSLSHCQAIYDRLGVSLTPADVHG 265

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 801
            ES Y   + Q+V  L+ KGLL    G + ++      ++   +P+ + K+DGG+ Y TSD
Sbjct: 266  ESAYNDDLAQVVADLDSKGLLSESQGAQCVFMDAFKNKEGEPLPVIVRKADGGYLYATSD 325

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAA+R R    +AD ++Y  D  Q +HF+ +   AK AG + P +T +  +GFG + G D
Sbjct: 326  LAALRYRASTLRADRMLYFVDQRQALHFQQMFTLAKLAGFV-PEQTELAHMGFGTMNGPD 384

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR G TVKL +LLDE  +R+   +++KN   +L   EL    ++V  G +KYADL
Sbjct: 385  GRPFKTRDGGTVKLVDLLDEAEQRAFALVQEKN--PQLDDEELRNIARSVGIGAVKYADL 442

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S NR+ DY+F+F++ML   GNTA YLLYAYTR+AS+ R A     +L +A  S    L  
Sbjct: 443  SKNRSSDYIFNFEQMLSFEGNTAPYLLYAYTRVASVFRKA-----ELDMANVSGDFLLNE 497

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
            + E  LA  L++  +VL  V      H L  YLYD++  FS FY++C  +  + E     
Sbjct: 498  DAEHTLAARLVQFGEVLQNVADKGQPHLLSAYLYDVAGLFSSFYEHCPILSSEDE----R 553

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNI 1066
            +   RL LA  TA+ +K   ++L +
Sbjct: 554  IRQSRLKLAALTARTLKHGMELLGL 578



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/402 (36%), Positives = 214/402 (53%), Gaps = 46/402 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N A+ L K     G K  P D+A+ + + + ++ A        + K+++A PGF+
Sbjct: 41  GDFATNIALMLAK---PAGMK--PRDLAEKLIAALPNDSA--------VAKVDIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F +  +    +   + +   G+  P   +   V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFQADDWLTGLLDSALADDFLGISRP--EQPQTVVVDYSSPNLAKEMHVGHLRSTIIGD 145

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQAFYKESK 299
            + R LE+LGH V+R NHVGDWGTQFGML+A+L+++  +   +  S  +A+L+ FY+ +K
Sbjct: 146 AVVRTLEFLGHTVIRQNHVGDWGTQFGMLLAYLEEQKTEEGERELSRELANLETFYRAAK 205

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           +RFDE + F  RA   VV LQ  D      W     VS    Q IYDRL V+LT     G
Sbjct: 206 QRFDESDSFADRARALVVKLQSGDDYCLTLWAEFNQVSLSHCQAIYDRLGVSLTPADVHG 265

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 411
           ES Y   + Q+V  L+ KGLL    G + ++      ++   +P+ + K+DGG+ Y TSD
Sbjct: 266 ESAYNDDLAQVVADLDSKGLLSESQGAQCVFMDAFKNKEGEPLPVIVRKADGGYLYATSD 325

Query: 412 LAAIRQRIEEEKADWIVYVTDHR-SYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVP 470
           LAA+R R    +AD ++Y  D R + H   Q +    K  G     +         MN P
Sbjct: 326 LAALRYRASTLRADRMLYFVDQRQALH--FQQMFTLAKLAGFVPEQTELAHMGFGTMNGP 383

Query: 471 ------VRDRMSVRDYLSDVFTHAVQVAF-------PELGDK 499
                  RD  +V+  L D+   A Q AF       P+L D+
Sbjct: 384 DGRPFKTRDGGTVK--LVDLLDEAEQRAFALVQEKNPQLDDE 423



 Score =  218 bits (554), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 187/323 (57%), Gaps = 28/323 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N A+ L K     G K  P D+A+ + + + ++ A        + K+++A PGF+
Sbjct: 41   GDFATNIALMLAK---PAGMK--PRDLAEKLIAALPNDSA--------VAKVDIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F +  +    +   + +   G+  P   +   V+VD+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQADDWLTGLLDSALADDFLGISRP--EQPQTVVVDYSSPNLAKEMHVGHLRSTIIGD 145

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQAFYKESK 1316
             + R LE+LGH V+R NHVGDWGTQFGML+A+L+++  +   +  S  +A+L+ FY+ +K
Sbjct: 146  AVVRTLEFLGHTVIRQNHVGDWGTQFGMLLAYLEEQKTEEGERELSRELANLETFYRAAK 205

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            +RFDE + F  RA   VV LQ  D      W     VS    Q IYDRL V+LT     G
Sbjct: 206  QRFDESDSFADRARALVVKLQSGDDYCLTLWAEFNQVSLSHCQAIYDRLGVSLTPADVHG 265

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSD 1428
            ES Y   + Q+V  L+ KGLL    G + ++      ++   +P+ + K+DGG+ Y TSD
Sbjct: 266  ESAYNDDLAQVVADLDSKGLLSESQGAQCVFMDAFKNKEGEPLPVIVRKADGGYLYATSD 325

Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
            LAA+R R    +AD ++Y  D R
Sbjct: 326  LAALRYRASTLRADRMLYFVDQR 348


>gi|398882020|ref|ZP_10636992.1| arginyl-tRNA synthetase [Pseudomonas sp. GM60]
 gi|398199739|gb|EJM86674.1| arginyl-tRNA synthetase [Pseudomonas sp. GM60]
          Length = 578

 Score =  370 bits (949), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 332/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLTPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A    +
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVTKTEIAGPGFLNFFQNTDALATRLDAALADE 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108  HIGVRKAGPAQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKGRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDDFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+ + +K+KN   EL   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYNLVKEKN--PELAEDELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  ++L  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEVE-----GQIVLEAAHEHELAAKLAQFGEILNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  +   ++++    RL LA  T + +K+
Sbjct: 511  VSEKGTPHILCTYLYDVAGLFSSFYENCPILSAETPAQMQS----RLRLAALTGRTLKQ 565



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/446 (35%), Positives = 226/446 (50%), Gaps = 43/446 (9%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLTPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A    +
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENVTKTEIAGPGFLNFFQNTDALATRLDAALADE 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108 HIGVRKAGPAQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKGRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDDFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTH 487
            D R      Q  A   K   ++     +  G          P + R      L D+ T 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTE 398

Query: 488 AVQVAFPELGDKTASVASTNEKYVHK 513
           A + A+  + +K   +A    + + K
Sbjct: 399 AQERAYNLVKEKNPELAEDELRNIAK 424



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/364 (39%), Positives = 200/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLTPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A    +
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVTKTEIAGPGFLNFFQNTDALATRLDAALADE 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108  HIGVRKAGPAQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKGRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDDFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|395647804|ref|ZP_10435654.1| arginyl-tRNA ligase [Pseudomonas extremaustralis 14-3 substr. 14-3b]
          Length = 578

 Score =  370 bits (949), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 336/596 (56%), Gaps = 46/596 (7%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQALTQLVNEGVLPEGLTPAIQVENTRDK---THGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
            K  P D+A+ I     + L  +P ++K     E+A PGF+NVF +      ++   + + 
Sbjct: 58   K--PRDLAEKI----IAALPADPQVSKA----EIAGPGFINVFQNTQALASRLDAALADA 107

Query: 594  --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
              GV+    ++  RV++D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVG
Sbjct: 108  RIGVRKAGASQ--RVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVG 165

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +KKRFDE   F  RA   VV LQ 
Sbjct: 166  DWGTQFGMLMAYLQEN-P---ITSNELSDLENFYRAAKKRFDESAEFADRARGLVVKLQA 221

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 768
             D +  + W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+ KGLL 
Sbjct: 222  GDKECLELWSRFRDISLAHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLV 281

Query: 769  LDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
              +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D 
Sbjct: 282  ESNGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQ 341

Query: 824  GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
             Q +HF+ + E A++AG +  +   M+ +GFG + G D + FKTR G TVKL +LL+E  
Sbjct: 342  RQALHFQQVFEVARRAGFVT-HPMHMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLNEAQ 400

Query: 884  RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
             R+   +K+KN   EL   +L    + V  G +KYADLS +R  DY F+FD ML+  GNT
Sbjct: 401  ERAYTLVKEKN--PELADADLRNIARVVGIGAVKYADLSKHRTSDYSFNFDLMLNFEGNT 458

Query: 944  AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
            A YLLYAYTR+A + R  G +  +++       ++LE   E  LA  L +  +VL  V  
Sbjct: 459  APYLLYAYTRVAGVFRKLGKDFSEVQ-----GQINLEAPHEQELAAKLAQFGEVLNSVGE 513

Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
                H LC YLY+++  FS FY+NC  +  D E + ++    RL LA    + +K+
Sbjct: 514  KGTPHILCTYLYEVAGLFSSFYENCPILTADDEAQKQS----RLRLAALAGRTLKQ 565



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/371 (39%), Positives = 207/371 (55%), Gaps = 37/371 (9%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQALTQLVNEGVLPEGLTPAIQVENTRDK---THGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
           K  P D+A+ I     + L  +P ++K     E+A PGF+NVF +      ++   + + 
Sbjct: 58  K--PRDLAEKI----IAALPADPQVSKA----EIAGPGFINVFQNTQALASRLDAALADA 107

Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
             GV+    ++  RV++D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVG
Sbjct: 108 RIGVRKAGASQ--RVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVG 165

Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
           DWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +KKRFDE   F  RA   VV LQ 
Sbjct: 166 DWGTQFGMLMAYLQEN-P---ITSNELSDLENFYRAAKKRFDESAEFADRARGLVVKLQA 221

Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 378
            D +  + W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+ KGLL 
Sbjct: 222 GDKECLELWSRFRDISLAHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLV 281

Query: 379 LDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
             +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D 
Sbjct: 282 ESNGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQ 341

Query: 434 RS---YHQVLQ 441
           R    + QV +
Sbjct: 342 RQALHFQQVFE 352



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/371 (39%), Positives = 207/371 (55%), Gaps = 37/371 (9%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQALTQLVNEGVLPEGLTPAIQVENTRDK---THGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
            K  P D+A+ I     + L  +P ++K     E+A PGF+NVF +      ++   + + 
Sbjct: 58   K--PRDLAEKI----IAALPADPQVSKA----EIAGPGFINVFQNTQALASRLDAALADA 107

Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
              GV+    ++  RV++D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVG
Sbjct: 108  RIGVRKAGASQ--RVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVG 165

Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
            DWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +KKRFDE   F  RA   VV LQ 
Sbjct: 166  DWGTQFGMLMAYLQEN-P---ITSNELSDLENFYRAAKKRFDESAEFADRARGLVVKLQA 221

Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLE 1395
             D +  + W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+ KGLL 
Sbjct: 222  GDKECLELWSRFRDISLAHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLV 281

Query: 1396 LDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
              +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D 
Sbjct: 282  ESNGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQ 341

Query: 1451 RS---YHQVLQ 1458
            R    + QV +
Sbjct: 342  RQALHFQQVFE 352


>gi|392544558|ref|ZP_10291695.1| arginyl-tRNA ligase [Pseudoalteromonas piscicida JCM 20779]
          Length = 580

 Score =  369 bits (948), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 236/605 (39%), Positives = 343/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M+++  L +    A+Q A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1    MNIKSILIEKANAAMQAAGIPEGTNPAVTQSTRPQ----FGDYQINGAMGAAKALK---- 52

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK----DI 590
              NP ++AQ I          N  +A + +K E+A PGF+N+ L   +    ++    D 
Sbjct: 53   -TNPRELAQKIID--------NLDVADLAEKTEIAGPGFINIHLKPEFLAASLEAANTDA 103

Query: 591  IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
             +   +  T +K   V+VDFSSPN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+
Sbjct: 104  KLGVAEHATPDK---VVVDFSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVIRQNHM 160

Query: 651  GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            GDWGTQFGMLIAHL+D     +  ++  +ADL++FY+++KKRFD++  F  +A   VV L
Sbjct: 161  GDWGTQFGMLIAHLEDLLNQGVDLENVALADLESFYRDAKKRFDDEAGFADKARDYVVKL 220

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 766
            Q  D   +K W+M  D S +  +++Y +LNVTLT      ES Y   +  ++  L++KG+
Sbjct: 221  QGGDAHCQKLWQMFIDTSVKHSEEVYGKLNVTLTRDDIMAESAYNDRLAGVIELLKEKGI 280

Query: 767  LELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
               D G ++++        G   + IV KS GGF Y T+DLAA   R  E   D I+   
Sbjct: 281  AVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYSTTDLAACDYRSNELDVDRILIFV 340

Query: 822  DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
            D  QG+HF  +E  A+KAG+L  +KT  +   FG ++G D K FKTR+G TVKLS+LLDE
Sbjct: 341  DARQGLHFNQVEITARKAGLLK-DKTSYEPSLFGTMMGNDGKPFKTRTGGTVKLSDLLDE 399

Query: 882  GLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
             + R+ +KL D  R + L+     E  + V  G +KYADLS +R  DY+F++D ML   G
Sbjct: 400  AVSRATEKLAD--RASGLSDEARQEIARKVGIGAVKYADLSKHRTSDYIFNWDTMLSFEG 457

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
             TA YL YAYTR+ SI R A ++S     A+ +  + ++  +E ALA  LL++ +VL L+
Sbjct: 458  ATAPYLQYAYTRVRSIFRKANMDS-----ASLTGRIQIQAPQEKALALKLLQLEEVLDLM 512

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
              +   H LC YLY++++ +  FY+ C  ++ D    ++     RLLL    A  +K   
Sbjct: 513  ISEATPHVLCSYLYELASLYMTFYEACPILKDDVAADVR---ESRLLLCNLVANSLKTGL 569

Query: 1062 DILNI 1066
            D+L I
Sbjct: 570  DLLGI 574



 Score =  226 bits (577), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 155/437 (35%), Positives = 226/437 (51%), Gaps = 38/437 (8%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M+++  L +    A+Q A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1   MNIKSILIEKANAAMQAAGIPEGTNPAVTQSTRPQ----FGDYQINGAMGAAKALK---- 52

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK----DI 200
             NP ++AQ I          N  +A + +K E+A PGF+N+ L   +    ++    D 
Sbjct: 53  -TNPRELAQKIID--------NLDVADLAEKTEIAGPGFINIHLKPEFLAASLEAANTDA 103

Query: 201 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
            +   +  T +K   V+VDFSSPN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+
Sbjct: 104 KLGVAEHATPDK---VVVDFSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVIRQNHM 160

Query: 261 GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           GDWGTQFGMLIAHL+D     +  ++  +ADL++FY+++KKRFD++  F  +A   VV L
Sbjct: 161 GDWGTQFGMLIAHLEDLLNQGVDLENVALADLESFYRDAKKRFDDEAGFADKARDYVVKL 220

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 376
           Q  D   +K W+M  D S +  +++Y +LNVTLT      ES Y   +  ++  L++KG+
Sbjct: 221 QGGDAHCQKLWQMFIDTSVKHSEEVYGKLNVTLTRDDIMAESAYNDRLAGVIELLKEKGI 280

Query: 377 LELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
              D G ++++        G   + IV KS GGF Y T+DLAA   R  E   D I+   
Sbjct: 281 AVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYSTTDLAACDYRSNELDVDRILIFV 340

Query: 432 DHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM----NVPVRDRMSVRDYLSDVFTH 487
           D R      Q +    +K G+    +S        M      P + R      LSD+   
Sbjct: 341 DARQGLHFNQ-VEITARKAGLLKDKTSYEPSLFGTMMGNDGKPFKTRTGGTVKLSDLLDE 399

Query: 488 AVQVAFPELGDKTASVA 504
           AV  A  +L D+ + ++
Sbjct: 400 AVSRATEKLADRASGLS 416



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/363 (38%), Positives = 200/363 (55%), Gaps = 33/363 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M+++  L +    A+Q A    G   A   ST  +    FGD+Q N AM   K  K    
Sbjct: 1    MNIKSILIEKANAAMQAAGIPEGTNPAVTQSTRPQ----FGDYQINGAMGAAKALK---- 52

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK----DI 1217
              NP ++AQ I          N  +A + +K E+A PGF+N+ L   +    ++    D 
Sbjct: 53   -TNPRELAQKIID--------NLDVADLAEKTEIAGPGFINIHLKPEFLAASLEAANTDA 103

Query: 1218 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
             +   +  T +K   V+VDFSSPN+AKEMHVGHLRSTIIGD + R LE+ G  V+R NH+
Sbjct: 104  KLGVAEHATPDK---VVVDFSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVIRQNHM 160

Query: 1278 GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            GDWGTQFGMLIAHL+D     +  ++  +ADL++FY+++KKRFD++  F  +A   VV L
Sbjct: 161  GDWGTQFGMLIAHLEDLLNQGVDLENVALADLESFYRDAKKRFDDEAGFADKARDYVVKL 220

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 1393
            Q  D   +K W+M  D S +  +++Y +LNVTLT      ES Y   +  ++  L++KG+
Sbjct: 221  QGGDAHCQKLWQMFIDTSVKHSEEVYGKLNVTLTRDDIMAESAYNDRLAGVIELLKEKGI 280

Query: 1394 LELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
               D G ++++        G   + IV KS GGF Y T+DLAA   R  E   D I+   
Sbjct: 281  AVEDQGAQVVFLDELANKDGEPSVFIVQKSGGGFLYSTTDLAACDYRSNELDVDRILIFV 340

Query: 1449 DHR 1451
            D R
Sbjct: 341  DAR 343


>gi|315127467|ref|YP_004069470.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015981|gb|ADT69319.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 580

 Score =  369 bits (948), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 226/605 (37%), Positives = 342/605 (56%), Gaps = 44/605 (7%)

Query: 475  MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 533
            M++R  L +    A+  A  PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1    MNIRTILVEKAIAAMTAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKMK--- 52

Query: 534  EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 593
               NP ++AQ I   +         ++ + +K E+A PGF+N+ L   +  + ++    N
Sbjct: 53   --SNPRELAQKIIDQL--------DVSDIAEKTEIAGPGFINIHLKPEFLAQSVQ--AAN 100

Query: 594  GVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
                  +N   K  +V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  VVR NH+
Sbjct: 101  NHAKLAVNEHTKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHM 160

Query: 651  GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
            GDWGTQFGMLIAHL+D+    +   +  +ADL+ FY+++KKRFD++E F  +A   VV L
Sbjct: 161  GDWGTQFGMLIAHLEDQINQGVDLDTVALADLETFYRDAKKRFDDEEGFADKARNYVVKL 220

Query: 710  QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 766
            Q  D   +K W++    S +  +++Y RLNVTLT      ES Y   +  ++  L+ K +
Sbjct: 221  QGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNI 280

Query: 767  LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
                 G ++++      +D       + KS GGF Y T+DLAA   R  +  A+ I+   
Sbjct: 281  AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 822  DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
            D  Q +HF  +E  A+KAG+L  ++T  +F  FG ++G D K FKTR+G TVKL++LL+E
Sbjct: 341  DARQSLHFNQVELTARKAGLLR-DETSYEFCPFGTMMGADGKPFKTRTGGTVKLADLLEE 399

Query: 882  GLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
             + R+  KL +  R ++L+  + SE  + V  G +KYADLS +R  DY+F++D ML   G
Sbjct: 400  SITRAAAKLAE--RESDLSDEDRSEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLSFEG 457

Query: 942  NTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLV 1001
             TA YL YAYTR+ SI R +G+++  L+       VS+   +E  LA  LL++ +VL L+
Sbjct: 458  ATAPYLQYAYTRVRSIFRKSGVDAASLK-----ADVSIIEPQEKTLALKLLQLEEVLDLM 512

Query: 1002 TRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCF 1061
              +   H LC YLY++++ +  FY+ C  ++   EG   +V   RL+L    A  ++   
Sbjct: 513  INEATPHVLCGYLYELASLYMTFYEACPVLK---EGVEPSVRDSRLVLCNLVADTLRTGL 569

Query: 1062 DILNI 1066
            D+L I
Sbjct: 570  DLLGI 574



 Score =  211 bits (538), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/363 (36%), Positives = 197/363 (54%), Gaps = 33/363 (9%)

Query: 85  MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 143
           M++R  L +    A+  A  PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1   MNIRTILVEKAIAAMTAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKMK--- 52

Query: 144 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 203
              NP ++AQ I   +         ++ + +K E+A PGF+N+ L   +  + ++    N
Sbjct: 53  --SNPRELAQKIIDQL--------DVSDIAEKTEIAGPGFINIHLKPEFLAQSVQ--AAN 100

Query: 204 GVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
                 +N   K  +V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  VVR NH+
Sbjct: 101 NHAKLAVNEHTKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHM 160

Query: 261 GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
           GDWGTQFGMLIAHL+D+    +   +  +ADL+ FY+++KKRFD++E F  +A   VV L
Sbjct: 161 GDWGTQFGMLIAHLEDQINQGVDLDTVALADLETFYRDAKKRFDDEEGFADKARNYVVKL 220

Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 376
           Q  D   +K W++    S +  +++Y RLNVTLT      ES Y   +  ++  L+ K +
Sbjct: 221 QGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNI 280

Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
                G ++++      +D       + KS GGF Y T+DLAA   R  +  A+ I+   
Sbjct: 281 AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 432 DHR 434
           D R
Sbjct: 341 DAR 343



 Score =  211 bits (538), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/363 (36%), Positives = 197/363 (54%), Gaps = 33/363 (9%)

Query: 1102 MSVRDYLSDVFTHAVQVA-FPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG 1160
            M++R  L +    A+  A  PE  D   +V  +      +FGD+Q N AM   K  K   
Sbjct: 1    MNIRTILVEKAIAAMTAAGLPE--DTNPAVTQSTRP---QFGDYQINGAMGAAKKMK--- 52

Query: 1161 EKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN 1220
               NP ++AQ I   +         ++ + +K E+A PGF+N+ L   +  + ++    N
Sbjct: 53   --SNPRELAQKIIDQL--------DVSDIAEKTEIAGPGFINIHLKPEFLAQSVQ--AAN 100

Query: 1221 GVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
                  +N   K  +V+VD+SSPN+AKEMHVGHLRSTIIGD + R LE+ G  VVR NH+
Sbjct: 101  NHAKLAVNEHTKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHM 160

Query: 1278 GDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
            GDWGTQFGMLIAHL+D+    +   +  +ADL+ FY+++KKRFD++E F  +A   VV L
Sbjct: 161  GDWGTQFGMLIAHLEDQINQGVDLDTVALADLETFYRDAKKRFDDEEGFADKARNYVVKL 220

Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGL 1393
            Q  D   +K W++    S +  +++Y RLNVTLT      ES Y   +  ++  L+ K +
Sbjct: 221  QGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNI 280

Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
                 G ++++      +D       + KS GGF Y T+DLAA   R  +  A+ I+   
Sbjct: 281  AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 1449 DHR 1451
            D R
Sbjct: 341  DAR 343


>gi|422590757|ref|ZP_16665409.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
            M302280]
 gi|330877954|gb|EGH12103.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
            M302280]
          Length = 578

 Score =  369 bits (948), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 224/567 (39%), Positives = 323/567 (56%), Gaps = 46/567 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K    K     P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGMK-----PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 629
            N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88   NFFQNTAALASRLDAALAD----PQLSVRKAGTAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144  GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200  QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
            ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260  ESAYNDDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAAIR R +  KAD  +Y  D  Q +HF+ + E A++AG ++    +++ +GFG + G D
Sbjct: 320  LAAIRYRSKVLKADRALYFVDQRQALHFQQVFEVARRAGFVHEG-MQLEHMGFGTMNGAD 378

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR G TVKL +LLDE   R+   +K+KN   E+   EL    +AV    +KYADL
Sbjct: 379  GRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKN--PEVAEAELRSIAKAVGISAVKYADL 436

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DY F+FD+ML   GNTA YLLYAYTR+A + R  G   +     A    + LE 
Sbjct: 437  SKHRASDYSFNFDQMLSFEGNTAPYLLYAYTRVAGVFRKLGTPFD-----ASKGHIVLEA 491

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
             +E  LA  L + N+ L  V      H LC YLYD++  FS FY+NC  +  +   + ++
Sbjct: 492  PQEQELAARLAQFNETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENCPILGAENPDQQQS 551

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA  T + +K+  D+L + T
Sbjct: 552  ----RLRLAALTGRTLKQGLDLLGLET 574



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 37/333 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K    K     P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAKPAGMK-----PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 239
           N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88  NFFQNTAALASRLDAALAD----PQLSVRKAGTAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144 GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200 QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
           ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260 ESAYNDDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 412 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           LAAIR R +  KAD  +Y  D R    + QV +
Sbjct: 320 LAAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 37/333 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K    K     P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGMK-----PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 1256
            N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88   NFFQNTAALASRLDAALAD----PQLSVRKAGTAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144  GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200  QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
            ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260  ESAYNDDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            LAAIR R +  KAD  +Y  D R    + QV +
Sbjct: 320  LAAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352


>gi|359782642|ref|ZP_09285862.1| arginyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
 gi|359369462|gb|EHK70033.1| arginyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
          Length = 585

 Score =  369 bits (947), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 220/575 (38%), Positives = 324/575 (56%), Gaps = 55/575 (9%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N A+ L K  + K     P D+A+ + + + ++ A        + K+E+A PGF+
Sbjct: 41   GDFASNVALLLAKPARAK-----PRDLAEKLLAALPADPA--------VSKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F +      ++     +   GV  P+   + RV+VD SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQNHAQLAARLDAAFADPHLGV--PSHEPRQRVVVDLSSPNLAKEMHVGHLRSTIIGD 145

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
             ++R+LE+LG +V+R NHVGDWGTQFGML+A+++++ P        +ADL+ FY+ +K R
Sbjct: 146  AVARVLEFLGDEVIRQNHVGDWGTQFGMLLAYMEEQ-PQ--AAEGELADLEVFYRAAKGR 202

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 748
            FD    F  RA + VVALQ  D    + WE    VS    Q++YDRLNV LT    +GES
Sbjct: 203  FDASPEFAARARELVVALQAGDAHCLRLWERFNAVSLSHCQEVYDRLNVKLTPADVKGES 262

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 803
             Y   + Q+V  L+  GLL   DG + ++       +   +P+ + K+ GG+ Y T+DLA
Sbjct: 263  AYNDDLAQVVADLDAAGLLTESDGARCVFLDEFKNAEGNPLPVIVQKAGGGYLYSTTDLA 322

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
            A+R R  +  AD  +Y  D  Q +HF++  E A++AG ++ +   ++ +GFG + G D +
Sbjct: 323  AMRYRSRQLHADRALYFVDQRQALHFQMAFEVARRAGFVDASMD-LEHMGFGTMNGADGR 381

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR------HTELTPTELSEAQQAVAYGCIK 917
             FKTR G TVKL +LLDE   R+   +K++N           +  EL    + V    +K
Sbjct: 382  PFKTRDGGTVKLVDLLDEAEERAYQLVKERNAGRAERGEAPFSEDELRHIGRVVGIASVK 441

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP- 976
            YADLS +R  DY F+F++ML   GNTA YLLYAYTR+AS+          LR A Q+ P 
Sbjct: 442  YADLSKHRTSDYSFNFEQMLSFEGNTAPYLLYAYTRVASV----------LRKAEQNEPA 491

Query: 977  --VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCI-EK 1033
              + L+  +E  L   L +  ++L  V      H LC YLYD++  FS FY+NC  +  +
Sbjct: 492  GSIRLDAPQEQDLGGRLAQFGEILASVADKGTPHLLCSYLYDLAGLFSSFYENCPILTAE 551

Query: 1034 DAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            DA      +   RL LA  T + +K+  ++L + T
Sbjct: 552  DA-----ALRQSRLRLAALTGRTLKQGLELLGLHT 581



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 187/321 (58%), Gaps = 29/321 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N A+ L K  + K     P D+A+ + + + ++ A        + K+E+A PGF+
Sbjct: 41  GDFASNVALLLAKPARAK-----PRDLAEKLLAALPADPA--------VSKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F +      ++     +   GV  P+   + RV+VD SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFQNHAQLAARLDAAFADPHLGV--PSHEPRQRVVVDLSSPNLAKEMHVGHLRSTIIGD 145

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
            ++R+LE+LG +V+R NHVGDWGTQFGML+A+++++ P        +ADL+ FY+ +K R
Sbjct: 146 AVARVLEFLGDEVIRQNHVGDWGTQFGMLLAYMEEQ-PQ--AAEGELADLEVFYRAAKGR 202

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 358
           FD    F  RA + VVALQ  D    + WE    VS    Q++YDRLNV LT    +GES
Sbjct: 203 FDASPEFAARARELVVALQAGDAHCLRLWERFNAVSLSHCQEVYDRLNVKLTPADVKGES 262

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 413
            Y   + Q+V  L+  GLL   DG + ++       +   +P+ + K+ GG+ Y T+DLA
Sbjct: 263 AYNDDLAQVVADLDAAGLLTESDGARCVFLDEFKNAEGNPLPVIVQKAGGGYLYSTTDLA 322

Query: 414 AIRQRIEEEKADWIVYVTDHR 434
           A+R R  +  AD  +Y  D R
Sbjct: 323 AMRYRSRQLHADRALYFVDQR 343



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 187/321 (58%), Gaps = 29/321 (9%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N A+ L K  + K     P D+A+ + + + ++ A        + K+E+A PGF+
Sbjct: 41   GDFASNVALLLAKPARAK-----PRDLAEKLLAALPADPA--------VSKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F +      ++     +   GV  P+   + RV+VD SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQNHAQLAARLDAAFADPHLGV--PSHEPRQRVVVDLSSPNLAKEMHVGHLRSTIIGD 145

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
             ++R+LE+LG +V+R NHVGDWGTQFGML+A+++++ P        +ADL+ FY+ +K R
Sbjct: 146  AVARVLEFLGDEVIRQNHVGDWGTQFGMLLAYMEEQ-PQ--AAEGELADLEVFYRAAKGR 202

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 1375
            FD    F  RA + VVALQ  D    + WE    VS    Q++YDRLNV LT    +GES
Sbjct: 203  FDASPEFAARARELVVALQAGDAHCLRLWERFNAVSLSHCQEVYDRLNVKLTPADVKGES 262

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
             Y   + Q+V  L+  GLL   DG + ++       +   +P+ + K+ GG+ Y T+DLA
Sbjct: 263  AYNDDLAQVVADLDAAGLLTESDGARCVFLDEFKNAEGNPLPVIVQKAGGGYLYSTTDLA 322

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
            A+R R  +  AD  +Y  D R
Sbjct: 323  AMRYRSRQLHADRALYFVDQR 343


>gi|398954075|ref|ZP_10675779.1| arginyl-tRNA synthetase [Pseudomonas sp. GM33]
 gi|398153017|gb|EJM41525.1| arginyl-tRNA synthetase [Pseudomonas sp. GM33]
          Length = 578

 Score =  369 bits (947), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 236/599 (39%), Positives = 329/599 (54%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKTEIAGPGFLNFFQNTDALATRLDAALADD 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +KDKN   EL   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYTLVKDKN--PELAEAELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  ++L  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEV-----DGQIVLEATHELELAAKLAQFGEILNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VSEKGTPHILCTYLYDVAGLFSSFYENCPILAADTPAQMQS----RLRLAALTGRTLKQ 565



 Score =  223 bits (568), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 161/448 (35%), Positives = 227/448 (50%), Gaps = 47/448 (10%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENVSKTEIAGPGFLNFFQNTDALATRLDAALADD 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108 HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKG-----TAKKMNVPVRDRMSVRDYLSDVF 485
            D R      Q  A   K   ++     +  G      A       RD  +V+  L D+ 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVK--LIDLL 396

Query: 486 THAVQVAFPELGDKTASVASTNEKYVHK 513
           T A + A+  + DK   +A    + + K
Sbjct: 397 TEAQERAYTLVKDKNPELAEAELRNIAK 424



 Score =  218 bits (556), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 198/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKTEIAGPGFLNFFQNTDALATRLDAALADD 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|402700231|ref|ZP_10848210.1| arginyl-tRNA ligase [Pseudomonas fragi A22]
          Length = 578

 Score =  369 bits (947), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 227/556 (40%), Positives = 318/556 (57%), Gaps = 42/556 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K     G K  P D+A+ I + + ++        + I K E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKIIAALPAD--------EQISKTEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F +      ++   + +   GV   T  + +R +VD S+PN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQNTQALASRLDAALADPKIGVHKAT--RPMRTVVDMSAPNLAKEMHVGHLRSTIIGD 145

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
             ++R+LE+LG +V+R NHVGDWGTQFGML+A+L++  P     S  ++DL+ FY+ +KKR
Sbjct: 146  GVARVLEFLGDEVIRQNHVGDWGTQFGMLMAYLEEN-P---ITSDELSDLENFYRAAKKR 201

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 748
            FDE   F  RA   VV LQ  DPD    W    D+S    QKIY++LNV LT     GES
Sbjct: 202  FDESPEFADRARGLVVKLQAGDPDCLALWTKFKDISLSHCQKIYEQLNVKLTMADVMGES 261

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 803
             Y   +  +V  L+ KG+L   +G + ++       +   +P+ IVK+DGG+ Y T+DLA
Sbjct: 262  AYNDDLINVVNDLKAKGMLVESNGAQCVFLDEFKNAEGEPLPVIIVKADGGYLYATTDLA 321

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
            AIR R    KAD  +Y  D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D +
Sbjct: 322  AIRYRSGVLKADRALYFVDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGR 380

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTR G TVKL +LL E   R+   +K+KN   EL   EL    + V  G +KYADLS 
Sbjct: 381  PFKTRDGGTVKLVDLLTEAKERAYTLVKEKN--PELAEDELRAIAKVVGIGAVKYADLSK 438

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            +R  DY F+FD ML+  GNTA YLLYAYTR+A + R  G N +++        + LE  +
Sbjct: 439  HRTSDYSFNFDLMLNFEGNTAPYLLYAYTRVAGVFRKLGKNFDEV-----EGQIVLEAPQ 493

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  L +  +VL  V      H LC YLY+++  FS FY+NC  +  + E +  +  
Sbjct: 494  EQDLAAKLAQFGEVLNNVAEKGTPHTLCTYLYEVAGLFSSFYENCPILTAEDEAQKHS-- 551

Query: 1044 TGRLLLAEATAKVMKK 1059
              RL LA    + +K+
Sbjct: 552  --RLRLAALAGRTLKQ 565



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 152/404 (37%), Positives = 216/404 (53%), Gaps = 35/404 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K     G K  P D+A+ I + + ++        + I K E+A PGF+
Sbjct: 41  GDFASNIAMMLAK---PAGMK--PRDLAEKIIAALPAD--------EQISKTEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F +      ++   + +   GV   T  + +R +VD S+PN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFQNTQALASRLDAALADPKIGVHKAT--RPMRTVVDMSAPNLAKEMHVGHLRSTIIGD 145

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
            ++R+LE+LG +V+R NHVGDWGTQFGML+A+L++  P     S  ++DL+ FY+ +KKR
Sbjct: 146 GVARVLEFLGDEVIRQNHVGDWGTQFGMLMAYLEEN-P---ITSDELSDLENFYRAAKKR 201

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 358
           FDE   F  RA   VV LQ  DPD    W    D+S    QKIY++LNV LT     GES
Sbjct: 202 FDESPEFADRARGLVVKLQAGDPDCLALWTKFKDISLSHCQKIYEQLNVKLTMADVMGES 261

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 413
            Y   +  +V  L+ KG+L   +G + ++       +   +P+ IVK+DGG+ Y T+DLA
Sbjct: 262 AYNDDLINVVNDLKAKGMLVESNGAQCVFLDEFKNAEGEPLPVIIVKADGGYLYATTDLA 321

Query: 414 AIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---- 469
           AIR R    KAD  +Y  D R      Q  A   K   ++     +  G    MN     
Sbjct: 322 AIRYRSGVLKADRALYFVDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFG-TMNGADGR 380

Query: 470 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 513
           P + R      L D+ T A + A+  + +K   +A    + + K
Sbjct: 381 PFKTRDGGTVKLVDLLTEAKERAYTLVKEKNPELAEDELRAIAK 424



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 188/321 (58%), Gaps = 30/321 (9%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K     G K  P D+A+ I + + ++        + I K E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKIIAALPAD--------EQISKTEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F +      ++   + +   GV   T  + +R +VD S+PN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQNTQALASRLDAALADPKIGVHKAT--RPMRTVVDMSAPNLAKEMHVGHLRSTIIGD 145

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
             ++R+LE+LG +V+R NHVGDWGTQFGML+A+L++  P     S  ++DL+ FY+ +KKR
Sbjct: 146  GVARVLEFLGDEVIRQNHVGDWGTQFGMLMAYLEEN-P---ITSDELSDLENFYRAAKKR 201

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 1375
            FDE   F  RA   VV LQ  DPD    W    D+S    QKIY++LNV LT     GES
Sbjct: 202  FDESPEFADRARGLVVKLQAGDPDCLALWTKFKDISLSHCQKIYEQLNVKLTMADVMGES 261

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
             Y   +  +V  L+ KG+L   +G + ++       +   +P+ IVK+DGG+ Y T+DLA
Sbjct: 262  AYNDDLINVVNDLKAKGMLVESNGAQCVFLDEFKNAEGEPLPVIIVKADGGYLYATTDLA 321

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
            AIR R    KAD  +Y  D R
Sbjct: 322  AIRYRSGVLKADRALYFVDQR 342


>gi|421563697|ref|ZP_16009513.1| arginine--tRNA ligase [Neisseria meningitidis NM2795]
 gi|421907256|ref|ZP_16337139.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha704]
 gi|393291637|emb|CCI73126.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha704]
 gi|402340182|gb|EJU75385.1| arginine--tRNA ligase [Neisseria meningitidis NM2795]
          Length = 572

 Score =  369 bits (947), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 232/561 (41%), Positives = 316/561 (56%), Gaps = 39/561 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N+ L   +  + I+  + +        ++   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 750
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 805
               ++ +V  L +KGL   DD  K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQAVVDDLVQKGLAVEDDSAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R+    AD ++YV D  Q +HF  L   + KAG L P      FVGFG ++G+D K F
Sbjct: 321  RYRVGTLHADRLLYVVDHRQALHFEQLFTTSHKAGYL-PENVGAAFVGFGTMMGKDGKPF 379

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTRSGDTVKL +LL E + R+   +K+KN   EL   E ++  + V  G +KYADLS NR
Sbjct: 380  KTRSGDTVKLVDLLTEAVERATALVKEKN--PELGADEAAKIGKTVGIGAVKYADLSKNR 437

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DYVF +D ML   GNTA YL YAYTR+ S+ R A   SE       + P  L    E 
Sbjct: 438  TSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKA---SE----WDATAPTVLTEPLEK 490

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  LL+  DVL  V      H+L  YLY I+T FS FY+ C  ++  AEG  +     
Sbjct: 491  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILK--AEGASR---NS 545

Query: 1046 RLLLAEATAKVMKKCFDILNI 1066
            RL LA+ T   +K+  ++L I
Sbjct: 546  RLQLAKLTGDTLKQGLELLGI 566



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/416 (36%), Positives = 214/416 (51%), Gaps = 35/416 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36  GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N+ L   +  + I+  + +        ++   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83  NLRLRPEFLAQNIQTALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143 SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 360
           ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201 EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 415
              ++ +V  L +KGL   DD  K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261 NDDLQAVVDDLVQKGLAVEDDSAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 416 RQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVR 472
           R R+    AD ++YV DHR      Q      K   +  +  +   G    M     P +
Sbjct: 321 RYRVGTLHADRLLYVVDHRQALHFEQLFTTSHKAGYLPENVGAAFVGFGTMMGKDGKPFK 380

Query: 473 DRMSVRDYLSDVFTHAVQVAF-------PELG-DKTASVASTNEKYVHKFGDFQCN 520
            R      L D+ T AV+ A        PELG D+ A +  T      K+ D   N
Sbjct: 381 TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKN 436



 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 183/319 (57%), Gaps = 24/319 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDFQ N  M   K       K+NP ++AQ +A      LA N     VI+  EVA PGF+
Sbjct: 36   GDFQINGVMGAAK-----KAKQNPRELAQKVADA----LAGN----AVIESAEVAGPGFI 82

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N+ L   +  + I+  + +        ++   V++D+SSPN+AKEMHVGHLRS+IIGD+I
Sbjct: 83   NLRLRPEFLAQNIQTALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSI 142

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            SR+L ++G+ V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 143  SRVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 200

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFY 1377
            ED  F   A + VV LQ  D      W+   D+S    Q +YD L + L      GES Y
Sbjct: 201  EDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKY 260

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTSDLAAI 1432
               ++ +V  L +KGL   DD  K+++ ++     G     IV K  GGF Y ++DLA +
Sbjct: 261  NDDLQAVVDDLVQKGLAVEDDSAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACL 320

Query: 1433 RQRIEEEKADWIVYVTDHR 1451
            R R+    AD ++YV DHR
Sbjct: 321  RYRVGTLHADRLLYVVDHR 339


>gi|348029694|ref|YP_004872380.1| arginyl-tRNA synthetase [Glaciecola nitratireducens FR1064]
 gi|347947037|gb|AEP30387.1| arginyl-tRNA synthetase [Glaciecola nitratireducens FR1064]
          Length = 577

 Score =  369 bits (947), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 229/602 (38%), Positives = 331/602 (54%), Gaps = 37/602 (6%)

Query: 475  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            M++   LS  F  AVQ     +G + A +  +       FG++Q N AMAL K  K K  
Sbjct: 1    MNIHHLLSARFAQAVQA----MGIQDAPIPLSRSTRP-DFGEYQFNGAMALAKQLKQK-- 53

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
               P DIA+ I +        N  L  V  K+E+A PGF+N+ L   +     +  + + 
Sbjct: 54   ---PRDIAEQILA--------NVKLDDVASKLEIAGPGFINIHLKNEWLSAWCERALQDS 102

Query: 595  VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
                  ++   ++VD+SSPN+AKEMHVGHLRSTIIGD +  +LEYLGH V+R NH+GDWG
Sbjct: 103  KLTIEPHESKTIVVDYSSPNLAKEMHVGHLRSTIIGDAVVNVLEYLGHHVIRQNHMGDWG 162

Query: 655  TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
            TQFGML+AHL DK          ++DL+ FY+E+K RFD +  F  RA   VV LQ  D 
Sbjct: 163  TQFGMLLAHLNDKLKSSSVAETALSDLEDFYREAKVRFDNEAGFADRARDYVVQLQGGDA 222

Query: 715  DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 771
               K W+   D+S +  +++Y +LNV+L      GES Y   +  ++  L +KG++  D 
Sbjct: 223  ACLKLWQQFIDISIQHSEEVYKKLNVSLKREHIMGESSYNPDLVNVLADLTEKGIVVEDQ 282

Query: 772  GRKI-----MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
            G K+     M  +D       + KS GG+ Y T+DLAAIR R  +  A   +  TD  Q 
Sbjct: 283  GAKVVFIPEMSNKDGDPAVYIVQKSGGGYLYATTDLAAIRYRANQLHAQRTLIFTDNRQA 342

Query: 827  VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
            +HF+  E  A+KAG L  + +  +   FG++LG+D K FKTRSG+T+KLS+LLDE + R+
Sbjct: 343  LHFKQTEIVARKAGYLAESDS-YEHCPFGMMLGKDNKPFKTRSGETIKLSDLLDEAIERA 401

Query: 887  LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
              ++    R + L+     +    V  G +KYADLS NR  DY+F +D ML   GNTA Y
Sbjct: 402  --EVLISQRESSLSADAKKQVAATVGIGAVKYADLSKNRTTDYIFDWDTMLSFEGNTAPY 459

Query: 947  LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
            L YAYTR+ SI R A    +D+     S  VS+   +E  L   L++ ++VL  V ++  
Sbjct: 460  LQYAYTRVKSIFRNA---KQDMDTYQAS--VSVASVQEHDLVVKLMQFDEVLEAVCKEAT 514

Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             H +C YLY++++ F  FY+    ++     + +   + RL L   TAK +K   +IL I
Sbjct: 515  PHIMCTYLYEVASLFMRFYEANPVLKPQVSEEDR---SSRLGLCALTAKTLKVGLEILGI 571

Query: 1067 RT 1068
             T
Sbjct: 572  DT 573



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/441 (35%), Positives = 227/441 (51%), Gaps = 35/441 (7%)

Query: 85  MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           M++   LS  F  AVQ     +G + A +  +       FG++Q N AMAL K  K K  
Sbjct: 1   MNIHHLLSARFAQAVQA----MGIQDAPIPLSRSTRP-DFGEYQFNGAMALAKQLKQK-- 53

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
              P DIA+ I +        N  L  V  K+E+A PGF+N+ L   +     +  + + 
Sbjct: 54  ---PRDIAEQILA--------NVKLDDVASKLEIAGPGFINIHLKNEWLSAWCERALQDS 102

Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
                 ++   ++VD+SSPN+AKEMHVGHLRSTIIGD +  +LEYLGH V+R NH+GDWG
Sbjct: 103 KLTIEPHESKTIVVDYSSPNLAKEMHVGHLRSTIIGDAVVNVLEYLGHHVIRQNHMGDWG 162

Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
           TQFGML+AHL DK          ++DL+ FY+E+K RFD +  F  RA   VV LQ  D 
Sbjct: 163 TQFGMLLAHLNDKLKSSSVAETALSDLEDFYREAKVRFDNEAGFADRARDYVVQLQGGDA 222

Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 381
              K W+   D+S +  +++Y +LNV+L      GES Y   +  ++  L +KG++  D 
Sbjct: 223 ACLKLWQQFIDISIQHSEEVYKKLNVSLKREHIMGESSYNPDLVNVLADLTEKGIVVEDQ 282

Query: 382 GRKI-----MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
           G K+     M  +D       + KS GG+ Y T+DLAAIR R  +  A   +  TD+R  
Sbjct: 283 GAKVVFIPEMSNKDGDPAVYIVQKSGGGYLYATTDLAAIRYRANQLHAQRTLIFTDNR-- 340

Query: 437 HQVLQAIAEE--EKKQGISSSSSSQTKGTAKKM----NVPVRDRMSVRDYLSDVFTHAVQ 490
            Q L     E   +K G  + S S        M    N P + R      LSD+   A++
Sbjct: 341 -QALHFKQTEIVARKAGYLAESDSYEHCPFGMMLGKDNKPFKTRSGETIKLSDLLDEAIE 399

Query: 491 VAFPELGDKTASVASTNEKYV 511
            A   +  + +S+++  +K V
Sbjct: 400 RAEVLISQRESSLSADAKKQV 420



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/358 (38%), Positives = 195/358 (54%), Gaps = 26/358 (7%)

Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            M++   LS  F  AVQ     +G + A +  +       FG++Q N AMAL K  K K  
Sbjct: 1    MNIHHLLSARFAQAVQA----MGIQDAPIPLSRSTRP-DFGEYQFNGAMALAKQLKQK-- 53

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
               P DIA+ I +        N  L  V  K+E+A PGF+N+ L   +     +  + + 
Sbjct: 54   ---PRDIAEQILA--------NVKLDDVASKLEIAGPGFINIHLKNEWLSAWCERALQDS 102

Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
                  ++   ++VD+SSPN+AKEMHVGHLRSTIIGD +  +LEYLGH V+R NH+GDWG
Sbjct: 103  KLTIEPHESKTIVVDYSSPNLAKEMHVGHLRSTIIGDAVVNVLEYLGHHVIRQNHMGDWG 162

Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
            TQFGML+AHL DK          ++DL+ FY+E+K RFD +  F  RA   VV LQ  D 
Sbjct: 163  TQFGMLLAHLNDKLKSSSVAETALSDLEDFYREAKVRFDNEAGFADRARDYVVQLQGGDA 222

Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLELDD 1398
               K W+   D+S +  +++Y +LNV+L      GES Y   +  ++  L +KG++  D 
Sbjct: 223  ACLKLWQQFIDISIQHSEEVYKKLNVSLKREHIMGESSYNPDLVNVLADLTEKGIVVEDQ 282

Query: 1399 GRKI-----MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            G K+     M  +D       + KS GG+ Y T+DLAAIR R  +  A   +  TD+R
Sbjct: 283  GAKVVFIPEMSNKDGDPAVYIVQKSGGGYLYATTDLAAIRYRANQLHAQRTLIFTDNR 340


>gi|237798091|ref|ZP_04586552.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020943|gb|EGI01000.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 578

 Score =  369 bits (946), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 225/563 (39%), Positives = 322/563 (57%), Gaps = 38/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 575  NVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N F  +   A      +    +         RV+VD S+PN+AKEMHVGHLRSTIIGD +
Sbjct: 88   NFFQNTAALALRLDAALADANLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGV 147

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            + +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K+RFD
Sbjct: 148  ANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAKQRFD 203

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E   F +RA   VV LQ  D +    WE   D+S    Q+ Y+RLNV LT     GES Y
Sbjct: 204  ESAEFAERARGLVVKLQAGDAECLTLWERFKDISLSHCQQTYERLNVKLTPADVMGESAY 263

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 805
               +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+DLAAI
Sbjct: 264  NDDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAI 323

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R +  KAD ++Y  D  Q +HF+ + E A++AG ++ N  +++ +GFG + G D + F
Sbjct: 324  RYRSKVLKADRVLYFVDQRQALHFQQVFEVARRAGFVH-NGMQLEHMGFGTMNGADGRPF 382

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTR G TVKL +LLDE   R+   +K+KN   E+  TEL    +AV    +KYADLS +R
Sbjct: 383  KTRDGGTVKLIDLLDEAEERAYTLVKEKN--PEVAETELRSIAKAVGISAVKYADLSKHR 440

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY F+FD+ML   GNTA YLLYAYTR+A + R  G   +     A    + LE  +E 
Sbjct: 441  ASDYSFNFDQMLSFEGNTAPYLLYAYTRVAGVFRKLGTPFD-----ASKGQIVLEAPQEQ 495

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  L +  + L  V      H LC YLYD++  FS FY+NC  +  ++  + ++    
Sbjct: 496  ELAARLAQFTETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENCPILGAESPDQQQS---- 551

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RL LA  T + +K+  D+L + T
Sbjct: 552  RLRLAALTGRTLKQGLDLLGLET 574



 Score =  216 bits (550), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 147/403 (36%), Positives = 213/403 (52%), Gaps = 33/403 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 185 NVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N F  +   A      +    +         RV+VD S+PN+AKEMHVGHLRSTIIGD +
Sbjct: 88  NFFQNTAALALRLDAALADANLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGV 147

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           + +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K+RFD
Sbjct: 148 ANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAKQRFD 203

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E   F +RA   VV LQ  D +    WE   D+S    Q+ Y+RLNV LT     GES Y
Sbjct: 204 ESAEFAERARGLVVKLQAGDAECLTLWERFKDISLSHCQQTYERLNVKLTPADVMGESAY 263

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 415
              +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+DLAAI
Sbjct: 264 NDDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAI 323

Query: 416 RQRIEEEKADWIVYVTDHR-SYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV----P 470
           R R +  KAD ++Y  D R + H   Q + E  ++ G   +           MN     P
Sbjct: 324 RYRSKVLKADRVLYFVDQRQALH--FQQVFEVARRAGFVHNGMQLEHMGFGTMNGADGRP 381

Query: 471 VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 513
            + R      L D+   A + A+  + +K   VA T  + + K
Sbjct: 382 FKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAETELRSIAK 424



 Score =  214 bits (545), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/329 (40%), Positives = 187/329 (56%), Gaps = 29/329 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 1202 NVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N F  +   A      +    +         RV+VD S+PN+AKEMHVGHLRSTIIGD +
Sbjct: 88   NFFQNTAALALRLDAALADANLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGV 147

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            + +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K+RFD
Sbjct: 148  ANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAKQRFD 203

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E   F +RA   VV LQ  D +    WE   D+S    Q+ Y+RLNV LT     GES Y
Sbjct: 204  ESAEFAERARGLVVKLQAGDAECLTLWERFKDISLSHCQQTYERLNVKLTPADVMGESAY 263

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 1432
               +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+DLAAI
Sbjct: 264  NDDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAI 323

Query: 1433 RQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            R R +  KAD ++Y  D R    + QV +
Sbjct: 324  RYRSKVLKADRVLYFVDQRQALHFQQVFE 352


>gi|336451068|ref|ZP_08621514.1| arginyl-tRNA synthetase [Idiomarina sp. A28L]
 gi|336282324|gb|EGN75562.1| arginyl-tRNA synthetase [Idiomarina sp. A28L]
          Length = 582

 Score =  369 bits (946), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 219/565 (38%), Positives = 321/565 (56%), Gaps = 38/565 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N A+ L K       K+NP        ++  + +A  P  A VI K E+A PGF+
Sbjct: 41   GDFATNLALMLAK-----PAKQNP-------RALAEAIIAAIPENA-VIGKTEIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N  + R     Q++    +   GV  P   K   V++D+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFTVDRSQLIAQLETAFADKRCGV--PLAEKPQTVVIDYSSPNLAKEMHVGHLRSTIIGD 145

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
             ++R L   GH V+  NHVGDWGTQFGML+AH++D   +  +    ++DL+ FYK +KKR
Sbjct: 146  AVARTLSLQGHKVIPQNHVGDWGTQFGMLLAHMEDSLQEASSDELALSDLETFYKAAKKR 205

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 748
            FD++E F  RA   VV LQ  D   K  W+   D S    Q++YDRL V LT      ES
Sbjct: 206  FDDEEGFADRARALVVKLQSGDAYCKSLWQKFIDTSLAHCQEVYDRLGVQLTRADVMAES 265

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 803
             Y   + ++V  L ++GLL  + G + ++     G++   +P+ + K DGG+ Y T+DLA
Sbjct: 266  AYNDDLAKVVVDLREQGLLVENQGAQCVFLDEFKGKEDEPLPIIVQKKDGGYLYATTDLA 325

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
            A+R R     AD ++YV D  Q +HF+ +    +KAG  +   T ++ +GFG+VLG+D +
Sbjct: 326  AVRYRAGTLGADRVIYVVDARQSLHFQQIFTLCRKAGYAS-ESTSLEHLGFGMVLGKDGR 384

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             +K+R G   KL++LLDE  RR+ + +  K   T+ +  E +   + V    +KYADLS 
Sbjct: 385  PYKSRDGGVTKLADLLDESERRAAELIAAKG--TDFSAEEQANVARVVGISSVKYADLSK 442

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF +D ML   GNTA YLLYAYTR+ SI + AG+   ++     S  + L  E+
Sbjct: 443  NRTSDYVFDWDTMLSFEGNTAPYLLYAYTRVNSIFQKAGLALHEV-----SGAIQLPTEQ 497

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            +  LA  L +  +++  V      H LC Y+++++ AFS FY+ C  +  D E    T+ 
Sbjct: 498  DETLANKLAQFPEIIASVGNKGMPHFLCGYMFELAGAFSSFYEACPILNADDE----TIK 553

Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
              RL LA  TA+++ +  ++L I T
Sbjct: 554  QSRLKLAGLTARILAQGLELLGIDT 578



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/346 (40%), Positives = 195/346 (56%), Gaps = 29/346 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N A+ L K       K+NP        ++  + +A  P  A VI K E+A PGF+
Sbjct: 41  GDFATNLALMLAK-----PAKQNP-------RALAEAIIAAIPENA-VIGKTEIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N  + R     Q++    +   GV  P   K   V++D+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFTVDRSQLIAQLETAFADKRCGV--PLAEKPQTVVIDYSSPNLAKEMHVGHLRSTIIGD 145

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
            ++R L   GH V+  NHVGDWGTQFGML+AH++D   +  +    ++DL+ FYK +KKR
Sbjct: 146 AVARTLSLQGHKVIPQNHVGDWGTQFGMLLAHMEDSLQEASSDELALSDLETFYKAAKKR 205

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 358
           FD++E F  RA   VV LQ  D   K  W+   D S    Q++YDRL V LT      ES
Sbjct: 206 FDDEEGFADRARALVVKLQSGDAYCKSLWQKFIDTSLAHCQEVYDRLGVQLTRADVMAES 265

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 413
            Y   + ++V  L ++GLL  + G + ++     G++   +P+ + K DGG+ Y T+DLA
Sbjct: 266 AYNDDLAKVVVDLREQGLLVENQGAQCVFLDEFKGKEDEPLPIIVQKKDGGYLYATTDLA 325

Query: 414 AIRQRIEEEKADWIVYVTDHR-SYHQVLQAIAEEEKKQGISSSSSS 458
           A+R R     AD ++YV D R S H   Q I    +K G +S S+S
Sbjct: 326 AVRYRAGTLGADRVIYVVDARQSLH--FQQIFTLCRKAGYASESTS 369



 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 183/321 (57%), Gaps = 26/321 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N A+ L K       K+NP        ++  + +A  P  A VI K E+A PGF+
Sbjct: 41   GDFATNLALMLAK-----PAKQNP-------RALAEAIIAAIPENA-VIGKTEIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N  + R     Q++    +   GV  P   K   V++D+SSPN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFTVDRSQLIAQLETAFADKRCGV--PLAEKPQTVVIDYSSPNLAKEMHVGHLRSTIIGD 145

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
             ++R L   GH V+  NHVGDWGTQFGML+AH++D   +  +    ++DL+ FYK +KKR
Sbjct: 146  AVARTLSLQGHKVIPQNHVGDWGTQFGMLLAHMEDSLQEASSDELALSDLETFYKAAKKR 205

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GES 1375
            FD++E F  RA   VV LQ  D   K  W+   D S    Q++YDRL V LT      ES
Sbjct: 206  FDDEEGFADRARALVVKLQSGDAYCKSLWQKFIDTSLAHCQEVYDRLGVQLTRADVMAES 265

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
             Y   + ++V  L ++GLL  + G + ++     G++   +P+ + K DGG+ Y T+DLA
Sbjct: 266  AYNDDLAKVVVDLREQGLLVENQGAQCVFLDEFKGKEDEPLPIIVQKKDGGYLYATTDLA 325

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
            A+R R     AD ++YV D R
Sbjct: 326  AVRYRAGTLGADRVIYVVDAR 346


>gi|442609080|ref|ZP_21023821.1| Arginyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
            29581]
 gi|441749692|emb|CCQ09883.1| Arginyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
            29581]
          Length = 580

 Score =  369 bits (946), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 224/570 (39%), Positives = 331/570 (58%), Gaps = 46/570 (8%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K  K      NP ++AQ I          N  +A + +K+E+A PG
Sbjct: 35   QFGDYQINGAMGAAKALK-----TNPRELAQKIID--------NLDVADLAEKVEIAGPG 81

Query: 573  FVNVFL------SRVYAGEQ-IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 625
            F+N+ L      +R+   EQ +K  + +  +P       +V+VDFSSPN+AKEMHVGHLR
Sbjct: 82   FINIHLKPEFLANRLMTAEQDVKLGVASHAKPQ------KVVVDFSSPNLAKEMHVGHLR 135

Query: 626  STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAF 684
            STIIGD + R LE+ G  V+R NH+GDWGTQFGMLIAHL+D     +  +   +ADL+ F
Sbjct: 136  STIIGDAVVRALEFRGDTVIRQNHMGDWGTQFGMLIAHLEDLLNQGVDLEKVALADLETF 195

Query: 685  YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 744
            Y+++KKRFD++E F  +A   VV LQ  D    K W++  D S +  +++Y +LNVTL  
Sbjct: 196  YRDAKKRFDDEEGFADKARDYVVKLQGGDAHCAKLWQLFIDTSVKHSEEVYGKLNVTLKR 255

Query: 745  ---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFT 796
                 ES Y   +  ++  L+ KGL   D G ++++      +D       + KS GGF 
Sbjct: 256  DDIMAESAYNDALAGVITTLQAKGLAVEDQGAQVVFLDELANKDGEPSAFIVQKSGGGFL 315

Query: 797  YDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGV 856
            Y T+DLAA   R  +  AD I+   D  Q +HF  +E  A+KAG L  ++T  +F  FG 
Sbjct: 316  YATTDLAACDYRSNQLGADRILIFVDARQSLHFSQVELTARKAGFLR-DETSYEFCPFGT 374

Query: 857  VLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCI 916
            ++G+D K FKTR+G TVKL++LL+E + R+ +KL    R ++L+    +E  + V  G +
Sbjct: 375  MMGDDGKPFKTRTGGTVKLADLLEEAIGRATEKL--AARESDLSAEARAEIARKVGIGAV 432

Query: 917  KYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTP 976
            KYADLS +R  DY+F++D ML   G TA YL YAYTR++SI R A ++S +L  A     
Sbjct: 433  KYADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRVSSIFRKANVDSSNLVGA----- 487

Query: 977  VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE 1036
            + ++  +E ALA  LL++ +VL L+  +   H LC YLY++++ +  FY+ C  +++D  
Sbjct: 488  IVIDEAQEKALALKLLQLEEVLDLMISEATPHVLCGYLYELASLYMSFYEACPILKEDVA 547

Query: 1037 GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
               K     RL+L    AK +    D+L I
Sbjct: 548  ---KETRESRLILCNLVAKTLATGLDLLGI 574



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 186/328 (56%), Gaps = 35/328 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K  K      NP ++AQ I          N  +A + +K+E+A PG
Sbjct: 35  QFGDYQINGAMGAAKALK-----TNPRELAQKIID--------NLDVADLAEKVEIAGPG 81

Query: 183 FVNVFL------SRVYAGEQ-IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 235
           F+N+ L      +R+   EQ +K  + +  +P       +V+VDFSSPN+AKEMHVGHLR
Sbjct: 82  FINIHLKPEFLANRLMTAEQDVKLGVASHAKPQ------KVVVDFSSPNLAKEMHVGHLR 135

Query: 236 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAF 294
           STIIGD + R LE+ G  V+R NH+GDWGTQFGMLIAHL+D     +  +   +ADL+ F
Sbjct: 136 STIIGDAVVRALEFRGDTVIRQNHMGDWGTQFGMLIAHLEDLLNQGVDLEKVALADLETF 195

Query: 295 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 354
           Y+++KKRFD++E F  +A   VV LQ  D    K W++  D S +  +++Y +LNVTL  
Sbjct: 196 YRDAKKRFDDEEGFADKARDYVVKLQGGDAHCAKLWQLFIDTSVKHSEEVYGKLNVTLKR 255

Query: 355 ---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFT 406
                ES Y   +  ++  L+ KGL   D G ++++      +D       + KS GGF 
Sbjct: 256 DDIMAESAYNDALAGVITTLQAKGLAVEDQGAQVVFLDELANKDGEPSAFIVQKSGGGFL 315

Query: 407 YDTSDLAAIRQRIEEEKADWIVYVTDHR 434
           Y T+DLAA   R  +  AD I+   D R
Sbjct: 316 YATTDLAACDYRSNQLGADRILIFVDAR 343



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 186/328 (56%), Gaps = 35/328 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K  K      NP ++AQ I          N  +A + +K+E+A PG
Sbjct: 35   QFGDYQINGAMGAAKALK-----TNPRELAQKIID--------NLDVADLAEKVEIAGPG 81

Query: 1200 FVNVFL------SRVYAGEQ-IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 1252
            F+N+ L      +R+   EQ +K  + +  +P       +V+VDFSSPN+AKEMHVGHLR
Sbjct: 82   FINIHLKPEFLANRLMTAEQDVKLGVASHAKPQ------KVVVDFSSPNLAKEMHVGHLR 135

Query: 1253 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAF 1311
            STIIGD + R LE+ G  V+R NH+GDWGTQFGMLIAHL+D     +  +   +ADL+ F
Sbjct: 136  STIIGDAVVRALEFRGDTVIRQNHMGDWGTQFGMLIAHLEDLLNQGVDLEKVALADLETF 195

Query: 1312 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 1371
            Y+++KKRFD++E F  +A   VV LQ  D    K W++  D S +  +++Y +LNVTL  
Sbjct: 196  YRDAKKRFDDEEGFADKARDYVVKLQGGDAHCAKLWQLFIDTSVKHSEEVYGKLNVTLKR 255

Query: 1372 ---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFT 1423
                 ES Y   +  ++  L+ KGL   D G ++++      +D       + KS GGF 
Sbjct: 256  DDIMAESAYNDALAGVITTLQAKGLAVEDQGAQVVFLDELANKDGEPSAFIVQKSGGGFL 315

Query: 1424 YDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
            Y T+DLAA   R  +  AD I+   D R
Sbjct: 316  YATTDLAACDYRSNQLGADRILIFVDAR 343


>gi|213969436|ref|ZP_03397573.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301382647|ref|ZP_07231065.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302060631|ref|ZP_07252172.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302132698|ref|ZP_07258688.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213925807|gb|EEB59365.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 578

 Score =  368 bits (945), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 224/567 (39%), Positives = 324/567 (57%), Gaps = 46/567 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 629
            N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88   NFFQNTAALASRLDAALAD----PQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144  GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200  QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
            ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260  ESAYNDDLANVVNDLKAAGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAAIR R +  KAD  +Y  D  Q +HF+ + E A++AG ++    +++ +GFG + G D
Sbjct: 320  LAAIRYRSKVLKADRALYFVDQRQALHFQQVFEVARRAGFVHEG-MQLEHMGFGTMNGAD 378

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR G TVKL +LLDE   R+   +K+KN   ++   EL    +AV    +KYADL
Sbjct: 379  GRPFKTRDGGTVKLIDLLDEAQERAYTLVKEKN--PQVAEAELRSIAKAVGISAVKYADL 436

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DY F+FD+ML   GNTA YLLYAYTR+A + R  G   +     A    + LE 
Sbjct: 437  SKHRASDYSFNFDQMLSFEGNTAPYLLYAYTRVAGVFRKLGTPFD-----ASKGHIVLEA 491

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
             +E  LA  L + N+ L  V      H LC YLYD++  FS FY+NC  +  +   + ++
Sbjct: 492  PQEQELAARLAQFNETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENCPILGAENPDQQQS 551

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA  T + +K+  D+L + T
Sbjct: 552  ----RLRLAALTGRTLKQGLDLLGLET 574



 Score =  218 bits (554), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 37/333 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 239
           N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88  NFFQNTAALASRLDAALAD----PQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144 GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200 QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
           ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260 ESAYNDDLANVVNDLKAAGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 412 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           LAAIR R +  KAD  +Y  D R    + QV +
Sbjct: 320 LAAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352



 Score =  218 bits (554), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 37/333 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 1256
            N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88   NFFQNTAALASRLDAALAD----PQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144  GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200  QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
            ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260  ESAYNDDLANVVNDLKAAGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            LAAIR R +  KAD  +Y  D R    + QV +
Sbjct: 320  LAAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352


>gi|422657451|ref|ZP_16719892.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
            M302278]
 gi|331016037|gb|EGH96093.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
            M302278]
          Length = 578

 Score =  368 bits (945), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 224/567 (39%), Positives = 324/567 (57%), Gaps = 46/567 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 629
            N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88   NFFQNTAALASRLDAALAD----PQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144  GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200  QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
            ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260  ESAYNDDLANVVNDLKAAGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAAIR R +  KAD  +Y  D  Q +HF+ + E A++AG ++    +++ +GFG + G D
Sbjct: 320  LAAIRYRSKVLKADRALYFVDQRQALHFQQVFEVARRAGFVHEG-MQLEHMGFGTMNGAD 378

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR G TVKL +LLDE   R+   +K+KN   ++   EL    +AV    +KYADL
Sbjct: 379  GRPFKTRDGGTVKLIDLLDEAQERAYTLVKEKN--PQVAEAELRSIARAVGISAVKYADL 436

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DY F+FD+ML   GNTA YLLYAYTR+A + R  G   +     A    + LE 
Sbjct: 437  SKHRASDYSFNFDQMLSFEGNTAPYLLYAYTRVAGVFRKLGTPFD-----ASKGHIVLEA 491

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
             +E  LA  L + N+ L  V      H LC YLYD++  FS FY+NC  +  +   + ++
Sbjct: 492  PQEQELAARLAQFNETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENCPILGAENPDQQQS 551

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA  T + +K+  D+L + T
Sbjct: 552  ----RLRLAALTGRTLKQGLDLLGLET 574



 Score =  218 bits (554), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 37/333 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 239
           N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88  NFFQNTAALASRLDAALAD----PQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144 GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200 QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
           ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260 ESAYNDDLANVVNDLKAAGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 412 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           LAAIR R +  KAD  +Y  D R    + QV +
Sbjct: 320 LAAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352



 Score =  218 bits (554), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 37/333 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 1256
            N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88   NFFQNTAALASRLDAALAD----PQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144  GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200  QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
            ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260  ESAYNDDLANVVNDLKAAGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            LAAIR R +  KAD  +Y  D R    + QV +
Sbjct: 320  LAAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352


>gi|426407252|ref|YP_007027351.1| arginyl-tRNA synthetase [Pseudomonas sp. UW4]
 gi|426265469|gb|AFY17546.1| arginyl-tRNA synthetase [Pseudomonas sp. UW4]
          Length = 578

 Score =  368 bits (944), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 236/599 (39%), Positives = 329/599 (54%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKAEIAGPGFLNFFQNTDALATRLDAALADD 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  HIGVRKAGPLQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +KDKN   EL   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYTLVKDKN--PELAEAELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  ++L  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEV-----DGQIVLEATHEHELAAKLAQFGEILNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VSEKGTPHILCTYLYDVAGLFSSFYENCPILAADTPAQMQS----RLRLAALTGRTLKQ 565



 Score =  223 bits (567), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 161/448 (35%), Positives = 227/448 (50%), Gaps = 47/448 (10%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENVSKAEIAGPGFLNFFQNTDALATRLDAALADD 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108 HIGVRKAGPLQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKG-----TAKKMNVPVRDRMSVRDYLSDVF 485
            D R      Q  A   K   ++     +  G      A       RD  +V+  L D+ 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVK--LIDLL 396

Query: 486 THAVQVAFPELGDKTASVASTNEKYVHK 513
           T A + A+  + DK   +A    + + K
Sbjct: 397 TEAQERAYTLVKDKNPELAEAELRNIAK 424



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 198/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKAEIAGPGFLNFFQNTDALATRLDAALADD 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  HIGVRKAGPLQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|407697807|ref|YP_006822595.1| arginyl-tRNA synthetase [Alcanivorax dieselolei B5]
 gi|407255145|gb|AFT72252.1| Arginyl-tRNA synthetase [Alcanivorax dieselolei B5]
          Length = 584

 Score =  368 bits (944), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 225/563 (39%), Positives = 317/563 (56%), Gaps = 36/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N A+ L K    K     P D+AQ++       L  +P+LAK     E+A PGF+
Sbjct: 41   GDFATNIALMLAKPAGVK-----PRDLAQALVDA----LPEDPALAKT----EIAGPGFI 87

Query: 575  NVFLSRVYAGEQIKDIIVN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N F S  +   Q++  + +  +  P   +   V+VD+S PN+AKEMHVGHLRSTIIGD +
Sbjct: 88   NFFQSDNWLASQLEAALADEHLAVPRPQQPQTVVVDYSGPNLAKEMHVGHLRSTIIGDAV 147

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY--LTKSPPIADLQAFYKESKKR 691
             R LE+LGH V+R NHVGDWGTQFGML+A+L+++  +      S  +A+L+ FY+ +K R
Sbjct: 148  VRSLEFLGHKVIRQNHVGDWGTQFGMLLAYLEEQKAEEGDTELSRELANLETFYRAAKLR 207

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 748
            FDE   F  RA   VV LQ  D    K W     VS      +Y+RL V+LT    RGES
Sbjct: 208  FDESPEFADRARALVVKLQSGDEYCLKLWNEFNQVSLSHCYAVYERLGVSLTATDVRGES 267

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 803
             Y   + ++V  L+  GLL  D G   ++      +D  ++P+ + K+DGG+ Y T+DLA
Sbjct: 268  TYNDDLPKVVADLDAAGLLTEDQGALCVFLDEFRNKDGDTLPVIVRKADGGYLYATTDLA 327

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
            A+R R  + +AD I+Y  D  Q +HF+ +   A++AG +      +  +GFG + G D K
Sbjct: 328  ALRYRANQLQADRILYFVDQRQALHFQQMFAVAREAGFVGAG-VDLAHMGFGTMNGPDGK 386

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTR G TVKL +LLDE  +R+   + +KN   EL   EL     AV  G +KY+DLS 
Sbjct: 387  PFKTRDGGTVKLIDLLDEAEQRAYQLVSEKN--PELDQDELRAIAHAVGIGAVKYSDLSK 444

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            NR  DYVF+FD ML   GNTA YLLYAYTR+ S+ R AG++   +        + L  E 
Sbjct: 445  NRTSDYVFNFDLMLSFDGNTAPYLLYAYTRVVSVFRKAGLSLNQV-----DGELLLREEA 499

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E ALA  L++  + +  V      H LC YLYD++  FS FY++C  +  D +     + 
Sbjct: 500  EQALAARLVQFGEAVQSVADKGQPHLLCAYLYDVAGLFSSFYEHCPILSGDDD----ALR 555

Query: 1044 TGRLLLAEATAKVMKKCFDILNI 1066
              RL LA  TA+ + +   +L +
Sbjct: 556  ASRLKLAALTARTLSEGLRLLGL 578



 Score =  226 bits (577), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 151/395 (38%), Positives = 214/395 (54%), Gaps = 37/395 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N A+ L K    K     P D+AQ++       L  +P+LAK     E+A PGF+
Sbjct: 41  GDFATNIALMLAKPAGVK-----PRDLAQALVDA----LPEDPALAKT----EIAGPGFI 87

Query: 185 NVFLSRVYAGEQIKDIIVN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N F S  +   Q++  + +  +  P   +   V+VD+S PN+AKEMHVGHLRSTIIGD +
Sbjct: 88  NFFQSDNWLASQLEAALADEHLAVPRPQQPQTVVVDYSGPNLAKEMHVGHLRSTIIGDAV 147

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY--LTKSPPIADLQAFYKESKKR 301
            R LE+LGH V+R NHVGDWGTQFGML+A+L+++  +      S  +A+L+ FY+ +K R
Sbjct: 148 VRSLEFLGHKVIRQNHVGDWGTQFGMLLAYLEEQKAEEGDTELSRELANLETFYRAAKLR 207

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 358
           FDE   F  RA   VV LQ  D    K W     VS      +Y+RL V+LT    RGES
Sbjct: 208 FDESPEFADRARALVVKLQSGDEYCLKLWNEFNQVSLSHCYAVYERLGVSLTATDVRGES 267

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 413
            Y   + ++V  L+  GLL  D G   ++      +D  ++P+ + K+DGG+ Y T+DLA
Sbjct: 268 TYNDDLPKVVADLDAAGLLTEDQGALCVFLDEFRNKDGDTLPVIVRKADGGYLYATTDLA 327

Query: 414 AIRQRIEEEKADWIVYVTDHRS--YHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVP- 470
           A+R R  + +AD I+Y  D R   + Q + A+A E    G     +    GT   MN P 
Sbjct: 328 ALRYRANQLQADRILYFVDQRQALHFQQMFAVAREAGFVGAGVDLAHMGFGT---MNGPD 384

Query: 471 -----VRDRMSVRDYLSDVFTHAVQVAFPELGDKT 500
                 RD  +V+  L D+   A Q A+  + +K 
Sbjct: 385 GKPFKTRDGGTVK--LIDLLDEAEQRAYQLVSEKN 417



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 185/321 (57%), Gaps = 24/321 (7%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N A+ L K    K     P D+AQ++       L  +P+LAK     E+A PGF+
Sbjct: 41   GDFATNIALMLAKPAGVK-----PRDLAQALVDA----LPEDPALAKT----EIAGPGFI 87

Query: 1202 NVFLSRVYAGEQIKDIIVN-GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N F S  +   Q++  + +  +  P   +   V+VD+S PN+AKEMHVGHLRSTIIGD +
Sbjct: 88   NFFQSDNWLASQLEAALADEHLAVPRPQQPQTVVVDYSGPNLAKEMHVGHLRSTIIGDAV 147

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDY--LTKSPPIADLQAFYKESKKR 1318
             R LE+LGH V+R NHVGDWGTQFGML+A+L+++  +      S  +A+L+ FY+ +K R
Sbjct: 148  VRSLEFLGHKVIRQNHVGDWGTQFGMLLAYLEEQKAEEGDTELSRELANLETFYRAAKLR 207

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 1375
            FDE   F  RA   VV LQ  D    K W     VS      +Y+RL V+LT    RGES
Sbjct: 208  FDESPEFADRARALVVKLQSGDEYCLKLWNEFNQVSLSHCYAVYERLGVSLTATDVRGES 267

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLA 1430
             Y   + ++V  L+  GLL  D G   ++      +D  ++P+ + K+DGG+ Y T+DLA
Sbjct: 268  TYNDDLPKVVADLDAAGLLTEDQGALCVFLDEFRNKDGDTLPVIVRKADGGYLYATTDLA 327

Query: 1431 AIRQRIEEEKADWIVYVTDHR 1451
            A+R R  + +AD I+Y  D R
Sbjct: 328  ALRYRANQLQADRILYFVDQR 348


>gi|312958530|ref|ZP_07773050.1| arginyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311287073|gb|EFQ65634.1| arginyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 578

 Score =  368 bits (944), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 233/594 (39%), Positives = 332/594 (55%), Gaps = 42/594 (7%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    TH V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQALTHLVNEGVLPEGLTPAIQVENTRDK---THGDFASNIAMMLSK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K  P D+A+ I + + ++        + + K E+A PGF+N F +      ++   + + 
Sbjct: 58   K--PRDLAEKIIAALPAD--------ESVTKAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 595  -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
             +      +  RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVGDW
Sbjct: 108  KIGARKAGEVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDSVIRQNHVGDW 167

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGML+A LQ+  P     S  ++DL+ FY+ +KKRFDE E F  RA   VV LQ  D
Sbjct: 168  GTQFGMLMASLQEN-P---ITSNELSDLENFYRAAKKRFDESEDFADRARGLVVKLQAGD 223

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELD 770
             +    W    D+S    Q+IY+ LNV LT     GES Y   +  +V  L+ KGLL   
Sbjct: 224  AECLALWNRFRDISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLVES 283

Query: 771  DGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQ 825
            +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D  Q
Sbjct: 284  NGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 826  GVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRR 885
             +HF+ + E A++AG +  +   M+ +GFG + G D + FKTR G TVKL +LL+E   R
Sbjct: 344  ALHFQQVFEVARRAGFVT-HPMHMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLNEAQDR 402

Query: 886  SLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
            + + +K+KN   EL   +L    + V  G +KYADLS +R  DY F+F+ ML+  GNTA 
Sbjct: 403  AYNLVKEKN--PELAEADLRNIARVVGIGAVKYADLSKHRTSDYSFNFELMLNFEGNTAP 460

Query: 946  YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
            YLLYAYTR+A + R  G   +D         +   HE+E  LA  L ++ +VL  V    
Sbjct: 461  YLLYAYTRVAGVFRKLG---KDFSEVEGRIVLDAPHEQE--LAAKLAQLGEVLNSVGEKG 515

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
              H LC YLY+++  FS FY+NC  +  D E + ++    RL LA    + +K+
Sbjct: 516  TPHILCTYLYEVAGLFSSFYENCPILTADDEAQKQS----RLRLAALAGRTLKQ 565



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/369 (39%), Positives = 203/369 (55%), Gaps = 33/369 (8%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    TH V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQALTHLVNEGVLPEGLTPAIQVENTRDK---THGDFASNIAMMLSK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
           K  P D+A+ I + + ++        + + K E+A PGF+N F +      ++   + + 
Sbjct: 58  K--PRDLAEKIIAALPAD--------ESVTKAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 205 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
            +      +  RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVGDW
Sbjct: 108 KIGARKAGEVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDSVIRQNHVGDW 167

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           GTQFGML+A LQ+  P     S  ++DL+ FY+ +KKRFDE E F  RA   VV LQ  D
Sbjct: 168 GTQFGMLMASLQEN-P---ITSNELSDLENFYRAAKKRFDESEDFADRARGLVVKLQAGD 223

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELD 380
            +    W    D+S    Q+IY+ LNV LT     GES Y   +  +V  L+ KGLL   
Sbjct: 224 AECLALWNRFRDISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLVES 283

Query: 381 DGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRS 435
           +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D R 
Sbjct: 284 NGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 436 ---YHQVLQ 441
              + QV +
Sbjct: 344 ALHFQQVFE 352



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/369 (39%), Positives = 203/369 (55%), Gaps = 33/369 (8%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    TH V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQALTHLVNEGVLPEGLTPAIQVENTRDK---THGDFASNIAMMLSK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K  P D+A+ I + + ++        + + K E+A PGF+N F +      ++   + + 
Sbjct: 58   K--PRDLAEKIIAALPAD--------ESVTKAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 1222 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
             +      +  RV+VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVGDW
Sbjct: 108  KIGARKAGEVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDSVIRQNHVGDW 167

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            GTQFGML+A LQ+  P     S  ++DL+ FY+ +KKRFDE E F  RA   VV LQ  D
Sbjct: 168  GTQFGMLMASLQEN-P---ITSNELSDLENFYRAAKKRFDESEDFADRARGLVVKLQAGD 223

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELD 1397
             +    W    D+S    Q+IY+ LNV LT     GES Y   +  +V  L+ KGLL   
Sbjct: 224  AECLALWNRFRDISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLVES 283

Query: 1398 DGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRS 1452
            +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D R 
Sbjct: 284  NGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 1453 ---YHQVLQ 1458
               + QV +
Sbjct: 344  ALHFQQVFE 352


>gi|294934539|ref|XP_002781131.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239891437|gb|EER12926.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 508

 Score =  368 bits (944), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 197/420 (46%), Positives = 275/420 (65%), Gaps = 22/420 (5%)

Query: 503 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
           VA+ N K    FGD+QCN+AM L K FK   E  +   I + I   + S L       + 
Sbjct: 33  VATANPK----FGDYQCNNAMGLAKKFKS--ELPDGMKIPKQIGEKIKSNLMEES--PEE 84

Query: 563 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG---VQPPTLNKKLRVLVDFSSPNIAKEM 619
            + + VA  GFV V LS  +  +Q+     +G   +  P      +V+VD SSPNIAKEM
Sbjct: 85  FESVTVAPAGFVTVKLSSGWIAKQLTSKCKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEM 144

Query: 620 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 679
           HVGHLRSTI+G+T+SR+LEY G+DV R+NHVGDWGTQFGMLI H++D +PD+L  +P ++
Sbjct: 145 HVGHLRSTILGETVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHTPEVS 204

Query: 680 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
           DLQ FYK +KKRFDE+  FKKR+ + VVALQ  D   +KAW++ CD+SR+ F+++Y+RL 
Sbjct: 205 DLQTFYKAAKKRFDEEPDFKKRSQEEVVALQSGDEYARKAWQICCDISRKSFEEVYNRLG 264

Query: 740 VT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 798
           +  L E+GESFY + +   V  LEK+GL+   +G K ++  D   +PM +VKSDGG+ YD
Sbjct: 265 IEGLKEQGESFYNEMIGPTVETLEKEGLVVESNGAKCIF-TDVDDVPMMVVKSDGGYGYD 323

Query: 799 TSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL 858
           ++D+ A+  R+ +  AD +VY+TDLGQ VHF+ L E AK AG  +P +T+++++GFGVV 
Sbjct: 324 STDVTAVWYRLTQLHADEVVYITDLGQEVHFKKLFEVAKMAGWHHPPQTKLEYLGFGVVC 383

Query: 859 GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK---------NRHTELTPTELSEAQQ 909
           G+D KKFKTRSG TVKL++LLDE   R+  +L+ +          R T LT  E   A +
Sbjct: 384 GDDGKKFKTRSGATVKLTDLLDEAEDRAKKELESRLNAGEGEAAGRSTGLTEEEFDRASK 443



 Score =  292 bits (747), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 152/324 (46%), Positives = 214/324 (66%), Gaps = 13/324 (4%)

Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
           VA+ N K    FGD+QCN+AM L K FK   E  +   I + I   + S L       + 
Sbjct: 33  VATANPK----FGDYQCNNAMGLAKKFKS--ELPDGMKIPKQIGEKIKSNLMEES--PEE 84

Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG---VQPPTLNKKLRVLVDFSSPNIAKEM 229
            + + VA  GFV V LS  +  +Q+     +G   +  P      +V+VD SSPNIAKEM
Sbjct: 85  FESVTVAPAGFVTVKLSSGWIAKQLTSKCKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEM 144

Query: 230 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 289
           HVGHLRSTI+G+T+SR+LEY G+DV R+NHVGDWGTQFGMLI H++D +PD+L  +P ++
Sbjct: 145 HVGHLRSTILGETVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHTPEVS 204

Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
           DLQ FYK +KKRFDE+  FKKR+ + VVALQ  D   +KAW++ CD+SR+ F+++Y+RL 
Sbjct: 205 DLQTFYKAAKKRFDEEPDFKKRSQEEVVALQSGDEYARKAWQICCDISRKSFEEVYNRLG 264

Query: 350 VT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 408
           +  L E+GESFY + +   V  LEK+GL+   +G K ++  D   +PM +VKSDGG+ YD
Sbjct: 265 IEGLKEQGESFYNEMIGPTVETLEKEGLVVESNGAKCIF-TDVDDVPMMVVKSDGGYGYD 323

Query: 409 TSDLAAIRQRIEEEKADWIVYVTD 432
           ++D+ A+  R+ +  AD +VY+TD
Sbjct: 324 STDVTAVWYRLTQLHADEVVYITD 347



 Score =  292 bits (747), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 152/324 (46%), Positives = 214/324 (66%), Gaps = 13/324 (4%)

Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
            VA+ N K    FGD+QCN+AM L K FK   E  +   I + I   + S L       + 
Sbjct: 33   VATANPK----FGDYQCNNAMGLAKKFKS--ELPDGMKIPKQIGEKIKSNLMEES--PEE 84

Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG---VQPPTLNKKLRVLVDFSSPNIAKEM 1246
             + + VA  GFV V LS  +  +Q+     +G   +  P      +V+VD SSPNIAKEM
Sbjct: 85   FESVTVAPAGFVTVKLSSGWIAKQLTSKCKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEM 144

Query: 1247 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 1306
            HVGHLRSTI+G+T+SR+LEY G+DV R+NHVGDWGTQFGMLI H++D +PD+L  +P ++
Sbjct: 145  HVGHLRSTILGETVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHTPEVS 204

Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
            DLQ FYK +KKRFDE+  FKKR+ + VVALQ  D   +KAW++ CD+SR+ F+++Y+RL 
Sbjct: 205  DLQTFYKAAKKRFDEEPDFKKRSQEEVVALQSGDEYARKAWQICCDISRKSFEEVYNRLG 264

Query: 1367 VT-LTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYD 1425
            +  L E+GESFY + +   V  LEK+GL+   +G K ++  D   +PM +VKSDGG+ YD
Sbjct: 265  IEGLKEQGESFYNEMIGPTVETLEKEGLVVESNGAKCIF-TDVDDVPMMVVKSDGGYGYD 323

Query: 1426 TSDLAAIRQRIEEEKADWIVYVTD 1449
            ++D+ A+  R+ +  AD +VY+TD
Sbjct: 324  STDVTAVWYRLTQLHADEVVYITD 347



 Score = 40.8 bits (94), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 1021 FSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
            F+ FY  C  +  D E         RLLL EAT +V+ +CFDIL+I
Sbjct: 464  FTAFYTECKVVGSDQE-------RSRLLLCEATRRVLAQCFDILDI 502


>gi|28872251|ref|NP_794870.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|38258308|sp|Q87V03.1|SYR_PSESM RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|28855505|gb|AAO58565.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 578

 Score =  367 bits (943), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 224/567 (39%), Positives = 324/567 (57%), Gaps = 46/567 (8%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 629
            N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88   NFFQNTAALASRLDAALSD----PQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
            GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144  GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 690  KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
            +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200  QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 747  ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
            ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260  ESAYNDDLANVVNDLKAAGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 802  LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
            LAAIR R +  KAD  +Y  D  Q +HF+ + E A++AG ++    +++ +GFG + G D
Sbjct: 320  LAAIRYRSKVLKADRALYFVDQRQALHFQQVFEVARRAGFVHEG-MQLEHMGFGTMNGAD 378

Query: 862  RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
             + FKTR G TVKL +LLDE   R+   +K+KN   ++   EL    +AV    +KYADL
Sbjct: 379  GRPFKTRDGGTVKLIDLLDEAQERAYTLVKEKN--PQVAEAELRSIAKAVGISAVKYADL 436

Query: 922  SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
            S +R  DY F+FD+ML   GNTA YLLYAYTR+A + R  G   +     A    + LE 
Sbjct: 437  SKHRASDYSFNFDQMLSFEGNTAPYLLYAYTRVAGVFRKLGTPFD-----ASKGHIVLEA 491

Query: 982  EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
             +E  LA  L + N+ L  V      H LC YLYD++  FS FY+NC  +  +   + ++
Sbjct: 492  PQEQELAARLAQFNETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENCPILGAENPDQQQS 551

Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
                RL LA  T + +K+  D+L + T
Sbjct: 552  ----RLRLAALTGRTLKQGLDLLGLET 574



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 37/333 (11%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 239
           N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88  NFFQNTAALASRLDAALSD----PQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
           GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144 GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
           +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200 QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
           ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260 ESAYNDDLANVVNDLKAAGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 412 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           LAAIR R +  KAD  +Y  D R    + QV +
Sbjct: 320 LAAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 191/333 (57%), Gaps = 37/333 (11%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKK-----LRVLVDFSSPNIAKEMHVGHLRSTII 1256
            N F +      ++   + +    P L+ +      RV+VD S+PN+AKEMHVGHLRSTII
Sbjct: 88   NFFQNTAALASRLDAALSD----PQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTII 143

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
            GD ++ +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K
Sbjct: 144  GDGVANVLEFLGDTVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLENFYRAAK 199

Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
            +RFDE E F +RA   VV LQ  D +    W    D+S    Q+ Y+RLNV LT     G
Sbjct: 200  QRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPADVMG 259

Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
            ES Y   +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+D
Sbjct: 260  ESAYNDDLANVVNDLKAAGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTD 319

Query: 1429 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            LAAIR R +  KAD  +Y  D R    + QV +
Sbjct: 320  LAAIRYRSKVLKADRALYFVDQRQALHFQQVFE 352


>gi|347539294|ref|YP_004846719.1| arginyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
 gi|345642472|dbj|BAK76305.1| arginyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
          Length = 572

 Score =  367 bits (942), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 224/566 (39%), Positives = 311/566 (54%), Gaps = 45/566 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA  K  K      NP ++AQ + +V+         L  +  K+E+A PG
Sbjct: 34   EFGDYQANGVMAAAKQLK-----TNPRELAQKVLAVL--------DLDGIASKLEIAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+ L  V+   + +  + +     T     +V+V++SS N+AKEMH+GHLR  IIGD 
Sbjct: 81   FINIHLDPVFLARRAETALADEALGITKVDAKKVMVEYSSVNLAKEMHIGHLRGGIIGDA 140

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----PIADLQAFYKES 688
            + R+  ++GH+VVR NHVGDWGTQFGML+A++ +     ++KS      + DL  FYK S
Sbjct: 141  LVRVNSFIGHNVVRQNHVGDWGTQFGMLVAYMVE-----ISKSGQADLELKDLDTFYKHS 195

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 745
            KKRFDED  F   A   VV LQ  D +  K W+    +S      IY +L + L +   R
Sbjct: 196  KKRFDEDTAFADTARDYVVKLQSGDAEVLKLWQQFVKLSLTHCNAIYQKLGLQLNDDDVR 255

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTS 800
            GESFY   +  LV  L +KGLL  D G ++++ ++     G     IV K  GG+ Y T+
Sbjct: 256  GESFYNDDLPVLVEELRQKGLLVEDQGAQVVFLDEFKNKEGEPAAFIVQKQGGGYLYATT 315

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            DL AIR R+ +   D  +YV D  Q +HF+ L   A+KAG L P +     +G G ++G 
Sbjct: 316  DLGAIRFRVNKLGLDRCLYVVDSRQSLHFQQLFSTARKAGWL-PEEADFQHIGHGTIMGP 374

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D K  KTRSG+ VKL ELLDE + R+   +  KN   EL   +  +    V  G +KYAD
Sbjct: 375  DGKPLKTRSGENVKLVELLDEAVERAFQLVTSKN--PELPEAQRRQIAAVVGIGALKYAD 432

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS +RN DY+F +D ML   GNTA YL YAYTR+ S+ R A    ED   AA+   V + 
Sbjct: 433  LSKSRNTDYIFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKA----EDFDPAAK---VLIT 485

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
               E  LA  L +  DV+  V      HHLC YLY+++T FS FY+ C  ++ + E    
Sbjct: 486  EVAEKQLAVALAQFEDVVFAVADSSQPHHLCGYLYNVATLFSRFYEACPILKSEGE---- 541

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNI 1066
             V   RL LA  TAK ++    +L I
Sbjct: 542  -VRASRLQLAALTAKTLQSGLGLLGI 566



 Score =  216 bits (549), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/386 (35%), Positives = 200/386 (51%), Gaps = 33/386 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA  K  K      NP ++AQ + +V+         L  +  K+E+A PG
Sbjct: 34  EFGDYQANGVMAAAKQLK-----TNPRELAQKVLAVL--------DLDGIASKLEIAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+ L  V+   + +  + +     T     +V+V++SS N+AKEMH+GHLR  IIGD 
Sbjct: 81  FINIHLDPVFLARRAETALADEALGITKVDAKKVMVEYSSVNLAKEMHIGHLRGGIIGDA 140

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----PIADLQAFYKES 298
           + R+  ++GH+VVR NHVGDWGTQFGML+A++ +     ++KS      + DL  FYK S
Sbjct: 141 LVRVNSFIGHNVVRQNHVGDWGTQFGMLVAYMVE-----ISKSGQADLELKDLDTFYKHS 195

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 355
           KKRFDED  F   A   VV LQ  D +  K W+    +S      IY +L + L +   R
Sbjct: 196 KKRFDEDTAFADTARDYVVKLQSGDAEVLKLWQQFVKLSLTHCNAIYQKLGLQLNDDDVR 255

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTS 410
           GESFY   +  LV  L +KGLL  D G ++++ ++     G     IV K  GG+ Y T+
Sbjct: 256 GESFYNDDLPVLVEELRQKGLLVEDQGAQVVFLDEFKNKEGEPAAFIVQKQGGGYLYATT 315

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV- 469
           DL AIR R+ +   D  +YV D R      Q  +   K   +   +  Q  G    M   
Sbjct: 316 DLGAIRFRVNKLGLDRCLYVVDSRQSLHFQQLFSTARKAGWLPEEADFQHIGHGTIMGPD 375

Query: 470 --PVRDRMSVRDYLSDVFTHAVQVAF 493
             P++ R      L ++   AV+ AF
Sbjct: 376 GKPLKTRSGENVKLVELLDEAVERAF 401



 Score =  211 bits (538), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 180/324 (55%), Gaps = 30/324 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA  K  K      NP ++AQ + +V+         L  +  K+E+A PG
Sbjct: 34   EFGDYQANGVMAAAKQLK-----TNPRELAQKVLAVL--------DLDGIASKLEIAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+ L  V+   + +  + +     T     +V+V++SS N+AKEMH+GHLR  IIGD 
Sbjct: 81   FINIHLDPVFLARRAETALADEALGITKVDAKKVMVEYSSVNLAKEMHIGHLRGGIIGDA 140

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----PIADLQAFYKES 1315
            + R+  ++GH+VVR NHVGDWGTQFGML+A++ +     ++KS      + DL  FYK S
Sbjct: 141  LVRVNSFIGHNVVRQNHVGDWGTQFGMLVAYMVE-----ISKSGQADLELKDLDTFYKHS 195

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 1372
            KKRFDED  F   A   VV LQ  D +  K W+    +S      IY +L + L +   R
Sbjct: 196  KKRFDEDTAFADTARDYVVKLQSGDAEVLKLWQQFVKLSLTHCNAIYQKLGLQLNDDDVR 255

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTS 1427
            GESFY   +  LV  L +KGLL  D G ++++ ++     G     IV K  GG+ Y T+
Sbjct: 256  GESFYNDDLPVLVEELRQKGLLVEDQGAQVVFLDEFKNKEGEPAAFIVQKQGGGYLYATT 315

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHR 1451
            DL AIR R+ +   D  +YV D R
Sbjct: 316  DLGAIRFRVNKLGLDRCLYVVDSR 339


>gi|221134747|ref|ZP_03561050.1| arginyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 577

 Score =  367 bits (942), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 211/564 (37%), Positives = 318/564 (56%), Gaps = 32/564 (5%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FG++Q N AM L K  +      +P D+AQ I  VV         L  + ++ E+A PG
Sbjct: 34   EFGEYQFNGAMGLAKRLR-----CSPRDVAQQILDVV--------DLDGIAEQCEIAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+ LS  +  +Q   ++ +         +  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 81   FINIHLSSQWLAQQASRVLADERLGIETQPQQNIVVDYSAPNLAKEMHVGHLRSTIIGDA 140

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
            +++ LE++GH+V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+++K RF
Sbjct: 141  VAKALEFMGHNVLRQNHMGDWGTQFGMLLAHLNDKLQANEVAETALSDLEDFYRQAKVRF 200

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            D +E F  RA + VV LQ  D      W+   DVS    +++Y++LNV+LT     GES 
Sbjct: 201  DAEEGFADRAREYVVKLQGGDDACLALWQNFIDVSIAHSEEVYEKLNVSLTREHVMGESA 260

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 804
            Y   +  ++  L+ +G+   D G ++++ +   D+   P   +  KS GG+ Y T+DLAA
Sbjct: 261  YNPDLANVISDLQAQGVAVEDAGAQVVFLDELADKNGKPAVYIVQKSGGGYLYATTDLAA 320

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            IR R ++  A   +  TD  Q +HF+  E  A+KAG L  ++ +     FG++LG+D K 
Sbjct: 321  IRYRKQQLAAHRTLIFTDARQALHFKQTEIVARKAGFLAADE-QYQHCPFGMMLGKDGKP 379

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTR+G TVKL +LLDE + R+   L    R  + +   L++    +  G +KYADLS N
Sbjct: 380  FKTRTGGTVKLIDLLDEAVERAQTLL--ATRDNDFSADTLADMANKIGIGAVKYADLSKN 437

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DY+F +D ML   GNTA YL YA+TRI SI   A +  E+ R       + +   +E
Sbjct: 438  RTTDYIFDWDAMLSFEGNTAPYLQYAFTRIQSIFNKANVTLENCR-----ENIVINAPQE 492

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  LL+  D L  +  +   H LC YLY++++ + +FY+ C  ++ D     K    
Sbjct: 493  KALATKLLQYQDTLEQMAHEATPHVLCTYLYELASLYMKFYEACPILKDDVSESDK---A 549

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL L    +  +    D+L I T
Sbjct: 550  SRLALCALCSNTLSHGLDVLGIAT 573



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/320 (38%), Positives = 188/320 (58%), Gaps = 21/320 (6%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FG++Q N AM L K  +      +P D+AQ I  VV         L  + ++ E+A PG
Sbjct: 34  EFGEYQFNGAMGLAKRLR-----CSPRDVAQQILDVV--------DLDGIAEQCEIAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+ LS  +  +Q   ++ +         +  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 81  FINIHLSSQWLAQQASRVLADERLGIETQPQQNIVVDYSAPNLAKEMHVGHLRSTIIGDA 140

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
           +++ LE++GH+V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+++K RF
Sbjct: 141 VAKALEFMGHNVLRQNHMGDWGTQFGMLLAHLNDKLQANEVAETALSDLEDFYRQAKVRF 200

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           D +E F  RA + VV LQ  D      W+   DVS    +++Y++LNV+LT     GES 
Sbjct: 201 DAEEGFADRAREYVVKLQGGDDACLALWQNFIDVSIAHSEEVYEKLNVSLTREHVMGESA 260

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 414
           Y   +  ++  L+ +G+   D G ++++ +   D+   P   +  KS GG+ Y T+DLAA
Sbjct: 261 YNPDLANVISDLQAQGVAVEDAGAQVVFLDELADKNGKPAVYIVQKSGGGYLYATTDLAA 320

Query: 415 IRQRIEEEKADWIVYVTDHR 434
           IR R ++  A   +  TD R
Sbjct: 321 IRYRKQQLAAHRTLIFTDAR 340



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/320 (38%), Positives = 188/320 (58%), Gaps = 21/320 (6%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FG++Q N AM L K  +      +P D+AQ I  VV         L  + ++ E+A PG
Sbjct: 34   EFGEYQFNGAMGLAKRLR-----CSPRDVAQQILDVV--------DLDGIAEQCEIAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+ LS  +  +Q   ++ +         +  ++VD+S+PN+AKEMHVGHLRSTIIGD 
Sbjct: 81   FINIHLSSQWLAQQASRVLADERLGIETQPQQNIVVDYSAPNLAKEMHVGHLRSTIIGDA 140

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
            +++ LE++GH+V+R NH+GDWGTQFGML+AHL DK          ++DL+ FY+++K RF
Sbjct: 141  VAKALEFMGHNVLRQNHMGDWGTQFGMLLAHLNDKLQANEVAETALSDLEDFYRQAKVRF 200

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            D +E F  RA + VV LQ  D      W+   DVS    +++Y++LNV+LT     GES 
Sbjct: 201  DAEEGFADRAREYVVKLQGGDDACLALWQNFIDVSIAHSEEVYEKLNVSLTREHVMGESA 260

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAA 1431
            Y   +  ++  L+ +G+   D G ++++ +   D+   P   +  KS GG+ Y T+DLAA
Sbjct: 261  YNPDLANVISDLQAQGVAVEDAGAQVVFLDELADKNGKPAVYIVQKSGGGYLYATTDLAA 320

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
            IR R ++  A   +  TD R
Sbjct: 321  IRYRKQQLAAHRTLIFTDAR 340


>gi|395799783|ref|ZP_10479063.1| arginyl-tRNA ligase [Pseudomonas sp. Ag1]
 gi|421138687|ref|ZP_15598742.1| arginyl-tRNA synthetase [Pseudomonas fluorescens BBc6R8]
 gi|395336288|gb|EJF68149.1| arginyl-tRNA ligase [Pseudomonas sp. Ag1]
 gi|404510074|gb|EKA23989.1| arginyl-tRNA synthetase [Pseudomonas fluorescens BBc6R8]
          Length = 578

 Score =  367 bits (942), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 237/599 (39%), Positives = 332/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V +T +K     GDF  N AM L K    K  
Sbjct: 4    TIRQLIQQALTQLVNEGVLPEGLTPAIQVENTRDK---THGDFASNIAMMLAKPAGLK-- 58

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
               P D+A+ I     + L  +P     + K E+A PGF+N F       SR+ A     
Sbjct: 59   ---PRDLAEKI----IAALPADPQ----VTKAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       RV +D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG DV+R N
Sbjct: 108  KIGVRKAGPAQ-----RVAIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDDVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +KKRFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSNELSDLENFYRAAKKRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D +  + W    ++S    Q+IY+ LNV LT     GES Y   +  +V  L+ KG
Sbjct: 219  LQAGDAECLELWGRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKG 278

Query: 766  LLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            LL   +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y 
Sbjct: 279  LLVESNGAQCVFLEEFKTADGDPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ + E A++AG +  +  +M+ +GFG + G D + FKTR G TVKL +LL+
Sbjct: 339  VDQRQALHFQQVFEVARRAGFVT-HPMQMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLN 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+ + +K+KN   EL   +L    + V  G +KYADLS +R  DY F+F+ ML+  
Sbjct: 398  EAQDRAYNLVKEKN--PELAEADLRNIARVVGIGAVKYADLSKHRTSDYSFNFELMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        ++LE   E  LA  L +  +VL  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEV-----EGQINLEAPHEQELAAKLAQFGEVLNS 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V      H LC YLY+++  FS FY+NC  +  D E + ++    RL LA    + +K+
Sbjct: 511  VGEKGTPHILCTYLYEVAGLFSSFYENCPILTADDEAQKQS----RLRLAALAGRTLKQ 565



 Score =  223 bits (567), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 150/374 (40%), Positives = 202/374 (54%), Gaps = 43/374 (11%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V +T +K     GDF  N AM L K    K  
Sbjct: 4   TIRQLIQQALTQLVNEGVLPEGLTPAIQVENTRDK---THGDFASNIAMMLAKPAGLK-- 58

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
              P D+A+ I     + L  +P     + K E+A PGF+N F       SR+ A     
Sbjct: 59  ---PRDLAEKI----IAALPADPQ----VTKAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       RV +D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG DV+R N
Sbjct: 108 KIGVRKAGPAQ-----RVAIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDDVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +KKRFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSNELSDLENFYRAAKKRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D +  + W    ++S    Q+IY+ LNV LT     GES Y   +  +V  L+ KG
Sbjct: 219 LQAGDAECLELWGRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKG 278

Query: 376 LLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           LL   +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y 
Sbjct: 279 LLVESNGAQCVFLEEFKTADGDPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYF 338

Query: 431 TDHRS---YHQVLQ 441
            D R    + QV +
Sbjct: 339 VDQRQALHFQQVFE 352



 Score =  223 bits (567), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 150/374 (40%), Positives = 202/374 (54%), Gaps = 43/374 (11%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V +T +K     GDF  N AM L K    K  
Sbjct: 4    TIRQLIQQALTQLVNEGVLPEGLTPAIQVENTRDK---THGDFASNIAMMLAKPAGLK-- 58

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
               P D+A+ I     + L  +P     + K E+A PGF+N F       SR+ A     
Sbjct: 59   ---PRDLAEKI----IAALPADPQ----VTKAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       RV +D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG DV+R N
Sbjct: 108  KIGVRKAGPAQ-----RVAIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDDVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +KKRFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSNELSDLENFYRAAKKRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D +  + W    ++S    Q+IY+ LNV LT     GES Y   +  +V  L+ KG
Sbjct: 219  LQAGDAECLELWGRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKG 278

Query: 1393 LLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            LL   +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y 
Sbjct: 279  LLVESNGAQCVFLEEFKTADGDPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYF 338

Query: 1448 TDHRS---YHQVLQ 1458
             D R    + QV +
Sbjct: 339  VDQRQALHFQQVFE 352


>gi|224825070|ref|ZP_03698176.1| arginyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
 gi|224602741|gb|EEG08918.1| arginyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
          Length = 572

 Score =  367 bits (942), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 224/566 (39%), Positives = 314/566 (55%), Gaps = 45/566 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N  MA  K  K      NP ++AQ + +V+         L  +  K+E+A PG
Sbjct: 34   EFGDYQANGVMAAAKQLK-----TNPRELAQKVLAVL--------DLEGIASKLEIAGPG 80

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            F+N+ L+  +   + +  + +     T     +V+V++SS N+AKEMH+GHLR  IIGD 
Sbjct: 81   FINIHLNPAFLARRAETALADEALGITKVDAKKVMVEYSSVNLAKEMHIGHLRGGIIGDA 140

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----PIADLQAFYKES 688
            + R+  ++GH+VVR NHVGDWGTQFGML+A++ +     ++KS      + DL  FYK S
Sbjct: 141  LVRVNSFIGHNVVRQNHVGDWGTQFGMLVAYMVE-----ISKSGQADLELKDLDTFYKHS 195

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 745
            KKRFDED  F   A   VV LQ  D +  K W+    +S      IY +L + L +   R
Sbjct: 196  KKRFDEDTAFADTARDYVVKLQSGDAEVLKLWQQFVKLSLTHCNAIYQKLGLQLNDDDVR 255

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTS 800
            GESFY   +  LV  L +KGLL  D G ++++ ++     G     IV K  GG+ Y T+
Sbjct: 256  GESFYNDDLPVLVEELRQKGLLVEDQGAQVVFLDEFKNKEGEPAAFIVQKQGGGYLYATT 315

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            DL AIR R+ +   D  +YV D  Q +HF+ L   A+KAG L P +     +G G ++G 
Sbjct: 316  DLGAIRFRVNKLGLDRCLYVVDSRQSLHFQQLFSTARKAGWL-PEEADFQHIGHGTIMGP 374

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D K  KTRSG+ VKL ELLDE + R+   +  KN   EL   E  +    V  G +KYAD
Sbjct: 375  DGKPLKTRSGENVKLVELLDEAVERAFQLVTSKN--PELPEAERRQIAAVVGIGALKYAD 432

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS +RN DY+F +D ML   GNTA YL YAYTR+ S+ R A    ED   AA+   V + 
Sbjct: 433  LSKSRNTDYIFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKA----EDFDPAAK---VLIT 485

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
               E  LA  L +  DV+  V      HHLC YLY+++T FS FY+ C  ++  +EG+++
Sbjct: 486  EVAEKQLAVVLAQFEDVVFAVADSSQPHHLCGYLYNVATLFSRFYEACPILK--SEGQVR 543

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNI 1066
                 RL LA  TAK ++    +L I
Sbjct: 544  ---ASRLQLAALTAKTLQSGLGLLGI 566



 Score =  215 bits (547), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/386 (35%), Positives = 200/386 (51%), Gaps = 33/386 (8%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N  MA  K  K      NP ++AQ + +V+         L  +  K+E+A PG
Sbjct: 34  EFGDYQANGVMAAAKQLK-----TNPRELAQKVLAVL--------DLEGIASKLEIAGPG 80

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           F+N+ L+  +   + +  + +     T     +V+V++SS N+AKEMH+GHLR  IIGD 
Sbjct: 81  FINIHLNPAFLARRAETALADEALGITKVDAKKVMVEYSSVNLAKEMHIGHLRGGIIGDA 140

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----PIADLQAFYKES 298
           + R+  ++GH+VVR NHVGDWGTQFGML+A++ +     ++KS      + DL  FYK S
Sbjct: 141 LVRVNSFIGHNVVRQNHVGDWGTQFGMLVAYMVE-----ISKSGQADLELKDLDTFYKHS 195

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 355
           KKRFDED  F   A   VV LQ  D +  K W+    +S      IY +L + L +   R
Sbjct: 196 KKRFDEDTAFADTARDYVVKLQSGDAEVLKLWQQFVKLSLTHCNAIYQKLGLQLNDDDVR 255

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTS 410
           GESFY   +  LV  L +KGLL  D G ++++ ++     G     IV K  GG+ Y T+
Sbjct: 256 GESFYNDDLPVLVEELRQKGLLVEDQGAQVVFLDEFKNKEGEPAAFIVQKQGGGYLYATT 315

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV- 469
           DL AIR R+ +   D  +YV D R      Q  +   K   +   +  Q  G    M   
Sbjct: 316 DLGAIRFRVNKLGLDRCLYVVDSRQSLHFQQLFSTARKAGWLPEEADFQHIGHGTIMGPD 375

Query: 470 --PVRDRMSVRDYLSDVFTHAVQVAF 493
             P++ R      L ++   AV+ AF
Sbjct: 376 GKPLKTRSGENVKLVELLDEAVERAF 401



 Score =  211 bits (537), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 180/324 (55%), Gaps = 30/324 (9%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N  MA  K  K      NP ++AQ + +V+         L  +  K+E+A PG
Sbjct: 34   EFGDYQANGVMAAAKQLK-----TNPRELAQKVLAVL--------DLEGIASKLEIAGPG 80

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            F+N+ L+  +   + +  + +     T     +V+V++SS N+AKEMH+GHLR  IIGD 
Sbjct: 81   FINIHLNPAFLARRAETALADEALGITKVDAKKVMVEYSSVNLAKEMHIGHLRGGIIGDA 140

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP----PIADLQAFYKES 1315
            + R+  ++GH+VVR NHVGDWGTQFGML+A++ +     ++KS      + DL  FYK S
Sbjct: 141  LVRVNSFIGHNVVRQNHVGDWGTQFGMLVAYMVE-----ISKSGQADLELKDLDTFYKHS 195

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 1372
            KKRFDED  F   A   VV LQ  D +  K W+    +S      IY +L + L +   R
Sbjct: 196  KKRFDEDTAFADTARDYVVKLQSGDAEVLKLWQQFVKLSLTHCNAIYQKLGLQLNDDDVR 255

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED----RGSIPMTIV-KSDGGFTYDTS 1427
            GESFY   +  LV  L +KGLL  D G ++++ ++     G     IV K  GG+ Y T+
Sbjct: 256  GESFYNDDLPVLVEELRQKGLLVEDQGAQVVFLDEFKNKEGEPAAFIVQKQGGGYLYATT 315

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHR 1451
            DL AIR R+ +   D  +YV D R
Sbjct: 316  DLGAIRFRVNKLGLDRCLYVVDSR 339


>gi|387891636|ref|YP_006321933.1| arginyl-tRNA synthetase [Pseudomonas fluorescens A506]
 gi|387162739|gb|AFJ57938.1| arginyl-tRNA synthetase [Pseudomonas fluorescens A506]
          Length = 578

 Score =  367 bits (942), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 329/594 (55%), Gaps = 42/594 (7%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQALTQLVHEGVLPEGLSPAIQVENTRDK---THGDFASNIAMMLSK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K  P D+A+ I       +A  P+ A V  K E+A PGF+N F +      ++   + + 
Sbjct: 58   K--PRDLAEKI-------IAALPADASVT-KAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 595  -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
             +         RV++D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVGDW
Sbjct: 108  RIGARKAGDSQRVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDW 167

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGML+A+LQ+  P     S  +ADL+ FY+ +KKRFDE E F  RA   VV LQ  D
Sbjct: 168  GTQFGMLMAYLQEN-P---ITSNELADLENFYRAAKKRFDESEEFADRARGLVVKLQAGD 223

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELD 770
             +    W    ++S    Q+IY+ LNV LT     GES Y   +  +V  L+ KGLL   
Sbjct: 224  EECLALWNRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLVES 283

Query: 771  DGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQ 825
            +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D  Q
Sbjct: 284  NGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 826  GVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRR 885
             +HF+ + E A++AG +  +   M+ +GFG + G D + FKTR G TVKL +LL E   R
Sbjct: 344  ALHFQQVFEVARRAGFVT-HPMHMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAQER 402

Query: 886  SLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
            + + +K+KN   EL   +L    + V  G +KYADLS +R  DY F+FD ML+  GNTA 
Sbjct: 403  AYNLVKEKN--PELAEADLRNIARVVGIGAVKYADLSKHRTSDYSFNFDLMLNFEGNTAP 460

Query: 946  YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
            YLLYAYTR+A + R  G   +D         +   HE+E  LA  L +  +VL  V    
Sbjct: 461  YLLYAYTRVAGVFRKLG---KDFSEVEGQIALDAAHEQE--LAAKLAQFGEVLNSVGEKG 515

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
              H LC YLY+++  FS FY+NC  +  D E + ++    RL LA    + +K+
Sbjct: 516  TPHILCTYLYEVAGLFSSFYENCPILTADDEAQKQS----RLRLAALAGRTLKQ 565



 Score =  223 bits (569), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 160/443 (36%), Positives = 229/443 (51%), Gaps = 37/443 (8%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQALTQLVHEGVLPEGLSPAIQVENTRDK---THGDFASNIAMMLSK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
           K  P D+A+ I       +A  P+ A V  K E+A PGF+N F +      ++   + + 
Sbjct: 58  K--PRDLAEKI-------IAALPADASVT-KAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 205 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
            +         RV++D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVGDW
Sbjct: 108 RIGARKAGDSQRVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDW 167

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           GTQFGML+A+LQ+  P     S  +ADL+ FY+ +KKRFDE E F  RA   VV LQ  D
Sbjct: 168 GTQFGMLMAYLQEN-P---ITSNELADLENFYRAAKKRFDESEEFADRARGLVVKLQAGD 223

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELD 380
            +    W    ++S    Q+IY+ LNV LT     GES Y   +  +V  L+ KGLL   
Sbjct: 224 EECLALWNRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLVES 283

Query: 381 DGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR- 434
           +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D R 
Sbjct: 284 NGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 435 SYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV----PVRDRMSVRDYLSDVFTHAVQ 490
           + H   Q + E  ++ G  +            MN     P + R      L D+ T A +
Sbjct: 344 ALH--FQQVFEVARRAGFVTHPMHMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAQE 401

Query: 491 VAFPELGDKTASVASTNEKYVHK 513
            A+  + +K   +A  + + + +
Sbjct: 402 RAYNLVKEKNPELAEADLRNIAR 424



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/369 (39%), Positives = 202/369 (54%), Gaps = 33/369 (8%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQALTQLVHEGVLPEGLSPAIQVENTRDK---THGDFASNIAMMLSK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K  P D+A+ I       +A  P+ A V  K E+A PGF+N F +      ++   + + 
Sbjct: 58   K--PRDLAEKI-------IAALPADASVT-KAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 1222 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
             +         RV++D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVGDW
Sbjct: 108  RIGARKAGDSQRVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDW 167

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            GTQFGML+A+LQ+  P     S  +ADL+ FY+ +KKRFDE E F  RA   VV LQ  D
Sbjct: 168  GTQFGMLMAYLQEN-P---ITSNELADLENFYRAAKKRFDESEEFADRARGLVVKLQAGD 223

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELD 1397
             +    W    ++S    Q+IY+ LNV LT     GES Y   +  +V  L+ KGLL   
Sbjct: 224  EECLALWNRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLVES 283

Query: 1398 DGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRS 1452
            +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D R 
Sbjct: 284  NGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 1453 ---YHQVLQ 1458
               + QV +
Sbjct: 344  ALHFQQVFE 352


>gi|409421896|ref|ZP_11259018.1| arginyl-tRNA ligase [Pseudomonas sp. HYS]
          Length = 578

 Score =  367 bits (941), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 224/556 (40%), Positives = 321/556 (57%), Gaps = 42/556 (7%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
            N F +      ++   + +   GV+     +K  V+VD S+PN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQNTQALASRLDAALADAKLGVKKAGPQQK--VVVDLSAPNLAKEMHVGHLRSTIIGD 145

Query: 632  TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 691
             +SR+LE+LG DV+R NHVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +KKR
Sbjct: 146  AVSRVLEFLGDDVIRQNHVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKKR 201

Query: 692  FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 748
            FDE E F  RA   VV LQ  DP+  K W    D+S    QK Y+ LNV LT     GES
Sbjct: 202  FDESEAFADRARGLVVKLQAGDPECLKLWTRFKDISLSHCQKTYELLNVKLTMADVMGES 261

Query: 749  FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLA 803
             Y   +  +V  L+ KGLL    G + ++ E+  +     +P+ + K+DGG+ Y T+DLA
Sbjct: 262  AYNDDLANVVNDLKAKGLLVESKGAQCVFLEEFKTAEGEPLPVIVQKADGGYLYATTDLA 321

Query: 804  AIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRK 863
            A+R R    KAD  +Y  D  Q +HF  + E A++AG +  +  +M+ +GFG + G D +
Sbjct: 322  AVRYRSNVLKADRALYFVDQRQALHFNQVFEVARRAGFVG-HPMQMEHMGFGTMNGADGR 380

Query: 864  KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
             FKTR G TVKL +LL E   R+   +K+KN   EL   +L    + V  G +KYADLS 
Sbjct: 381  PFKTRDGGTVKLIDLLTEAKERAYALVKEKN--PELAEADLRAIGEVVGIGAVKYADLSK 438

Query: 924  NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
            +R  DY F+F+ ML+  GNTA YLLYAYTR+A + R  G + +++        + L+  +
Sbjct: 439  HRTSDYSFNFELMLNFEGNTAPYLLYAYTRVAGVFRKLGKDFDEV-----DGQIILQAPQ 493

Query: 984  EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
            E  LA  L +  ++L  V      H LC YLYD++  FS FY+NC  +  D   + ++  
Sbjct: 494  EQDLAARLAQFGEILNNVAEKGTPHVLCTYLYDVAGLFSSFYENCPILAADTPEQQQS-- 551

Query: 1044 TGRLLLAEATAKVMKK 1059
              RL LA  T + +K+
Sbjct: 552  --RLRLAALTGRTLKQ 565



 Score =  226 bits (576), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 153/404 (37%), Positives = 221/404 (54%), Gaps = 39/404 (9%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
           N F +      ++   + +   GV+     +K  V+VD S+PN+AKEMHVGHLRSTIIGD
Sbjct: 88  NFFQNTQALASRLDAALADAKLGVKKAGPQQK--VVVDLSAPNLAKEMHVGHLRSTIIGD 145

Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 301
            +SR+LE+LG DV+R NHVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +KKR
Sbjct: 146 AVSRVLEFLGDDVIRQNHVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKKR 201

Query: 302 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 358
           FDE E F  RA   VV LQ  DP+  K W    D+S    QK Y+ LNV LT     GES
Sbjct: 202 FDESEAFADRARGLVVKLQAGDPECLKLWTRFKDISLSHCQKTYELLNVKLTMADVMGES 261

Query: 359 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLA 413
            Y   +  +V  L+ KGLL    G + ++ E+  +     +P+ + K+DGG+ Y T+DLA
Sbjct: 262 AYNDDLANVVNDLKAKGLLVESKGAQCVFLEEFKTAEGEPLPVIVQKADGGYLYATTDLA 321

Query: 414 AIRQRIEEEKADWIVYVTDHRS---YHQVLQAIAEEEKKQGISSSSSSQTKGT---AKKM 467
           A+R R    KAD  +Y  D R    ++QV + +A      G          GT   A   
Sbjct: 322 AVRYRSNVLKADRALYFVDQRQALHFNQVFE-VARRAGFVGHPMQMEHMGFGTMNGADGR 380

Query: 468 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 511
               RD  +V+  L D+ T A + A+  + +K   +A  + + +
Sbjct: 381 PFKTRDGGTVK--LIDLLTEAKERAYALVKEKNPELAEADLRAI 422



 Score =  226 bits (576), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 138/331 (41%), Positives = 194/331 (58%), Gaps = 33/331 (9%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K     G K  P D+A+ + + + ++        + + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAK---PAGMK--PRDLAEKLIAALPAD--------EQVSKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
            N F +      ++   + +   GV+     +K  V+VD S+PN+AKEMHVGHLRSTIIGD
Sbjct: 88   NFFQNTQALASRLDAALADAKLGVKKAGPQQK--VVVDLSAPNLAKEMHVGHLRSTIIGD 145

Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
             +SR+LE+LG DV+R NHVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +KKR
Sbjct: 146  AVSRVLEFLGDDVIRQNHVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKKR 201

Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGES 1375
            FDE E F  RA   VV LQ  DP+  K W    D+S    QK Y+ LNV LT     GES
Sbjct: 202  FDESEAFADRARGLVVKLQAGDPECLKLWTRFKDISLSHCQKTYELLNVKLTMADVMGES 261

Query: 1376 FYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLA 1430
             Y   +  +V  L+ KGLL    G + ++ E+  +     +P+ + K+DGG+ Y T+DLA
Sbjct: 262  AYNDDLANVVNDLKAKGLLVESKGAQCVFLEEFKTAEGEPLPVIVQKADGGYLYATTDLA 321

Query: 1431 AIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            A+R R    KAD  +Y  D R    ++QV +
Sbjct: 322  AVRYRSNVLKADRALYFVDQRQALHFNQVFE 352


>gi|404378455|ref|ZP_10983547.1| arginyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
 gi|294483582|gb|EFG31266.1| arginyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
          Length = 567

 Score =  367 bits (941), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 235/595 (39%), Positives = 331/595 (55%), Gaps = 45/595 (7%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
            L    ++ ++ AF   G   + +   + K   K GDFQ N  M   K        +NP +
Sbjct: 3    LQQTLSNQIEQAFAVAGISGSPIVLQSPKDA-KHGDFQINGVMGAAKKVG-----QNPRE 56

Query: 541  IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 600
            +AQ IA     EL    + A      EVA  GFVN+ LS  +  +Q+   + N  +  T 
Sbjct: 57   LAQKIAD----ELNGKGAFAGA----EVAGLGFVNLRLSPEFLAQQLSGSL-NIEKTATP 107

Query: 601  NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 660
            N    +++D+SSPN+AKEMHVGHLRS+IIGD+ISR+LE+LGH V+R NHVGDWGTQFGML
Sbjct: 108  NT---IVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFLGHKVIRQNHVGDWGTQFGML 164

Query: 661  IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 720
            +A+L ++  D       +ADL+ FY+ +K RFDED  F   A + VV LQ  D      W
Sbjct: 165  VAYLVEQQKD--NAEFKLADLEQFYRNAKIRFDEDAAFADLAREYVVKLQSGDEAVLALW 222

Query: 721  EMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 777
                ++S +  +++Y +L + L      GES Y   +  ++  LE KGL    DG K+++
Sbjct: 223  RQFVEISLQHAEEVYAKLGLKLQRADVAGESSYNADLHNVINELEAKGLAVDSDGAKVVF 282

Query: 778  GED----RGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
             ++     G     IV K  GGF Y T+D A +R R+ +     ++YV D  Q +HF+ L
Sbjct: 283  LDEFKNKEGEPAAFIVQKQGGGFLYATTDFACMRYRVGKLGGTRLLYVVDTRQDLHFKQL 342

Query: 833  EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
               ++KAG L P     +F+GFG ++ +D K FKTRSGDTVKL +LLDE + R+   ++D
Sbjct: 343  FTASRKAGWL-PENVSAEFIGFGTMMSKDGKPFKTRSGDTVKLVDLLDEAVERATKLVRD 401

Query: 893  KN-RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY 951
            KN + ++L   ++ E    V  G +KYADLS NR  DYVF +D ML   GNTA YL YAY
Sbjct: 402  KNPKLSDLDAVKIGE---TVGIGAVKYADLSKNRTSDYVFDWDNMLSFEGNTAPYLQYAY 458

Query: 952  TRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLC 1011
            TR+ S+ +  G    D  V A    + LE   E  LA  LL+  DVL  V      H+L 
Sbjct: 459  TRVQSVFKKVG----DWNVQA---ALKLEQPLEQQLAVELLKFEDVLQSVAETSFPHYLA 511

Query: 1012 EYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             YLY ++T FS FY+ C  ++  AEG ++     RL LA+ T + +K   D+L I
Sbjct: 512  NYLYQLATLFSRFYEACPILK--AEGDVR---DSRLKLAQLTGETLKMGLDLLGI 561



 Score =  207 bits (527), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/425 (34%), Positives = 216/425 (50%), Gaps = 31/425 (7%)

Query: 91  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
           L    ++ ++ AF   G   + +   + K   K GDFQ N  M   K        +NP +
Sbjct: 3   LQQTLSNQIEQAFAVAGISGSPIVLQSPKDA-KHGDFQINGVMGAAKKVG-----QNPRE 56

Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 210
           +AQ IA     EL    + A      EVA  GFVN+ LS  +  +Q+   + N  +  T 
Sbjct: 57  LAQKIAD----ELNGKGAFAGA----EVAGLGFVNLRLSPEFLAQQLSGSL-NIEKTATP 107

Query: 211 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 270
           N    +++D+SSPN+AKEMHVGHLRS+IIGD+ISR+LE+LGH V+R NHVGDWGTQFGML
Sbjct: 108 NT---IVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFLGHKVIRQNHVGDWGTQFGML 164

Query: 271 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 330
           +A+L ++  D       +ADL+ FY+ +K RFDED  F   A + VV LQ  D      W
Sbjct: 165 VAYLVEQQKD--NAEFKLADLEQFYRNAKIRFDEDAAFADLAREYVVKLQSGDEAVLALW 222

Query: 331 EMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 387
               ++S +  +++Y +L + L      GES Y   +  ++  LE KGL    DG K+++
Sbjct: 223 RQFVEISLQHAEEVYAKLGLKLQRADVAGESSYNADLHNVINELEAKGLAVDSDGAKVVF 282

Query: 388 GED----RGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQA 442
            ++     G     IV K  GGF Y T+D A +R R+ +     ++YV D R      Q 
Sbjct: 283 LDEFKNKEGEPAAFIVQKQGGGFLYATTDFACMRYRVGKLGGTRLLYVVDTRQDLHFKQL 342

Query: 443 IAEEEKKQGISSSSSSQTKGTAKKMN---VPVRDRMSVRDYLSDVFTHAVQVAFPELGDK 499
                K   +  + S++  G    M+    P + R      L D+   AV+ A   + DK
Sbjct: 343 FTASRKAGWLPENVSAEFIGFGTMMSKDGKPFKTRSGDTVKLVDLLDEAVERATKLVRDK 402

Query: 500 TASVA 504
              ++
Sbjct: 403 NPKLS 407



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/352 (37%), Positives = 191/352 (54%), Gaps = 28/352 (7%)

Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
            L    ++ ++ AF   G   + +   + K   K GDFQ N  M   K        +NP +
Sbjct: 3    LQQTLSNQIEQAFAVAGISGSPIVLQSPKDA-KHGDFQINGVMGAAKKVG-----QNPRE 56

Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTL 1227
            +AQ IA     EL    + A      EVA  GFVN+ LS  +  +Q+   + N  +  T 
Sbjct: 57   LAQKIAD----ELNGKGAFAGA----EVAGLGFVNLRLSPEFLAQQLSGSL-NIEKTATP 107

Query: 1228 NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 1287
            N    +++D+SSPN+AKEMHVGHLRS+IIGD+ISR+LE+LGH V+R NHVGDWGTQFGML
Sbjct: 108  NT---IVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFLGHKVIRQNHVGDWGTQFGML 164

Query: 1288 IAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAW 1347
            +A+L ++  D       +ADL+ FY+ +K RFDED  F   A + VV LQ  D      W
Sbjct: 165  VAYLVEQQKD--NAEFKLADLEQFYRNAKIRFDEDAAFADLAREYVVKLQSGDEAVLALW 222

Query: 1348 EMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 1404
                ++S +  +++Y +L + L      GES Y   +  ++  LE KGL    DG K+++
Sbjct: 223  RQFVEISLQHAEEVYAKLGLKLQRADVAGESSYNADLHNVINELEAKGLAVDSDGAKVVF 282

Query: 1405 GED----RGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             ++     G     IV K  GGF Y T+D A +R R+ +     ++YV D R
Sbjct: 283  LDEFKNKEGEPAAFIVQKQGGGFLYATTDFACMRYRVGKLGGTRLLYVVDTR 334


>gi|319955938|ref|YP_004167201.1| arginyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418342|gb|ADV45452.1| arginyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 565

 Score =  367 bits (941), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 227/569 (39%), Positives = 325/569 (57%), Gaps = 40/569 (7%)

Query: 506  TNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDK 565
             NE    +FGD+Q N AM L K        KNP  IAQ I       L  NP    ++ K
Sbjct: 27   VNEAGKPEFGDYQFNGAMPLAKKLG-----KNPRQIAQEIVEA----LPENP----ILSK 73

Query: 566  IEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVG 622
             E+A PGF+N+ LS  +   ++++   +   GV   +  K  RV+VD+SSPN+AK+MHVG
Sbjct: 74   AEIAGPGFINLTLSPKWLAARLEEAARDERLGVGRQSEPK--RVVVDYSSPNMAKQMHVG 131

Query: 623  HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 682
            HLRSTIIGD+++ L  +LG +V+R NH+GDWGTQFGMLIA+L++           + DL+
Sbjct: 132  HLRSTIIGDSLANLFAFLGDEVIRQNHIGDWGTQFGMLIAYLEELGE---GAEGSLHDLE 188

Query: 683  AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
             FYK +KKRFDED  F  ++ + VV LQ  D      WE   D S    +++Y +L+V L
Sbjct: 189  EFYKAAKKRFDEDAAFADKSREYVVKLQGGDVKCLHLWENFIDKSLGHCEEVYSKLHVRL 248

Query: 743  TE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 799
            T    + ES Y   ++++V  L+ KGLL+   G K+++ +D  + P+ I KSDGGF Y T
Sbjct: 249  TREDVKAESSYNDDLQKIVEDLQAKGLLKESRGAKVVFTDDEEN-PLIIQKSDGGFLYAT 307

Query: 800  SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
            +DLAAIR R++E  A  I YV D  Q  HF+ +   A+ AG   P   R++ V FG++L 
Sbjct: 308  TDLAAIRFRVKELGAKRISYVVDARQAGHFKQVFAVARMAG-YAPEDVRLEHVSFGMMLD 366

Query: 860  EDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYA 919
            +  + FKTR G TVKL +LLDE + R+   +  +  + E    EL +  + V  G +KY+
Sbjct: 367  KSGRPFKTRDGGTVKLIDLLDEAVERAKGAITQREAYDE---EELEKIAEIVGIGAVKYS 423

Query: 920  DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
            DLS NR  +Y+F +D+ML   GNT++Y  YAY RI SI R      E          V L
Sbjct: 424  DLSINRESNYIFDWDRMLSLEGNTSLYQQYAYARIRSIFRKYDGTIE--------GKVQL 475

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
              E E  LA  LL++ DVL    R+   H++  YLYD++T F +FY+N   +  D   ++
Sbjct: 476  GDELERRLALKLLQLEDVLRAAAREAMPHYITGYLYDLATLFMKFYENNPILRSDVPEEL 535

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            +     RL LA++TA  +K   +IL I+ 
Sbjct: 536  R---QSRLQLAKSTADTLKLALEILGIKV 561



 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/335 (42%), Positives = 196/335 (58%), Gaps = 25/335 (7%)

Query: 116 TNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDK 175
            NE    +FGD+Q N AM L K        KNP  IAQ I       L  NP    ++ K
Sbjct: 27  VNEAGKPEFGDYQFNGAMPLAKKLG-----KNPRQIAQEIVEA----LPENP----ILSK 73

Query: 176 IEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVG 232
            E+A PGF+N+ LS  +   ++++   +   GV   +  K  RV+VD+SSPN+AK+MHVG
Sbjct: 74  AEIAGPGFINLTLSPKWLAARLEEAARDERLGVGRQSEPK--RVVVDYSSPNMAKQMHVG 131

Query: 233 HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 292
           HLRSTIIGD+++ L  +LG +V+R NH+GDWGTQFGMLIA+L++           + DL+
Sbjct: 132 HLRSTIIGDSLANLFAFLGDEVIRQNHIGDWGTQFGMLIAYLEELGE---GAEGSLHDLE 188

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FYK +KKRFDED  F  ++ + VV LQ  D      WE   D S    +++Y +L+V L
Sbjct: 189 EFYKAAKKRFDEDAAFADKSREYVVKLQGGDVKCLHLWENFIDKSLGHCEEVYSKLHVRL 248

Query: 353 TE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 409
           T    + ES Y   ++++V  L+ KGLL+   G K+++ +D  + P+ I KSDGGF Y T
Sbjct: 249 TREDVKAESSYNDDLQKIVEDLQAKGLLKESRGAKVVFTDDEEN-PLIIQKSDGGFLYAT 307

Query: 410 SDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIA 444
           +DLAAIR R++E  A  I YV D R      Q  A
Sbjct: 308 TDLAAIRFRVKELGAKRISYVVDARQAGHFKQVFA 342



 Score =  231 bits (590), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/325 (42%), Positives = 194/325 (59%), Gaps = 25/325 (7%)

Query: 1133 TNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDK 1192
             NE    +FGD+Q N AM L K        KNP  IAQ I       L  NP    ++ K
Sbjct: 27   VNEAGKPEFGDYQFNGAMPLAKKLG-----KNPRQIAQEIVEA----LPENP----ILSK 73

Query: 1193 IEVAKPGFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVG 1249
             E+A PGF+N+ LS  +   ++++   +   GV   +  K  RV+VD+SSPN+AK+MHVG
Sbjct: 74   AEIAGPGFINLTLSPKWLAARLEEAARDERLGVGRQSEPK--RVVVDYSSPNMAKQMHVG 131

Query: 1250 HLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQ 1309
            HLRSTIIGD+++ L  +LG +V+R NH+GDWGTQFGMLIA+L++           + DL+
Sbjct: 132  HLRSTIIGDSLANLFAFLGDEVIRQNHIGDWGTQFGMLIAYLEELGE---GAEGSLHDLE 188

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FYK +KKRFDED  F  ++ + VV LQ  D      WE   D S    +++Y +L+V L
Sbjct: 189  EFYKAAKKRFDEDAAFADKSREYVVKLQGGDVKCLHLWENFIDKSLGHCEEVYSKLHVRL 248

Query: 1370 TE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDT 1426
            T    + ES Y   ++++V  L+ KGLL+   G K+++ +D  + P+ I KSDGGF Y T
Sbjct: 249  TREDVKAESSYNDDLQKIVEDLQAKGLLKESRGAKVVFTDDEEN-PLIIQKSDGGFLYAT 307

Query: 1427 SDLAAIRQRIEEEKADWIVYVTDHR 1451
            +DLAAIR R++E  A  I YV D R
Sbjct: 308  TDLAAIRFRVKELGAKRISYVVDAR 332


>gi|359434227|ref|ZP_09224505.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
 gi|357919110|dbj|GAA60754.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
          Length = 580

 Score =  366 bits (940), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 222/569 (39%), Positives = 332/569 (58%), Gaps = 44/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K  K      NP ++AQ I          N  ++ +  K E+A PG
Sbjct: 35   QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAQKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+ L   +  + +K       + VN    P      +V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIHLKPEFLAQSVKAANSDAKLAVNEHANPQ-----KVVVDYSSPNLAKEMHVGHLRS 136

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFY 685
            TIIGD+I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   S  +ADL+ FY
Sbjct: 137  TIIGDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDSVALADLETFY 196

Query: 686  KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 744
            +++KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+ 
Sbjct: 197  RDAKKRFDDEEGFADKARDYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYTRLNVTLTQA 256

Query: 745  --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 797
                ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y
Sbjct: 257  DIMAESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLY 316

Query: 798  DTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
             T+DLAA   R  +  AD I+   D  Q +HF  +E  A+KAG+L  ++T  +F  FG +
Sbjct: 317  ATTDLAACDYRSNKLGADRILIFVDARQNLHFNQVELTARKAGLLR-DETSYEFCPFGTM 375

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIK 917
            +G D K FKTR+G TVKL++LL+E + R+  KL +  R ++L+ +E SE  + V  G +K
Sbjct: 376  MGADNKPFKTRTGGTVKLADLLEESINRAAIKLAE--RESDLSDSERSEIARKVGIGAVK 433

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
            YADLS +R  DY+F++D ML   G TA YL YAYTR+ SI R +G+++  L     ++ V
Sbjct: 434  YADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRVRSIFRKSGVDAATL-----NSDV 488

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1037
            ++   +E ALA  LL++ +VL L+  +   H LC YLY++++ +  FY+ C  ++   EG
Sbjct: 489  AIIEPQEKALALKLLQLEEVLDLMISEATPHVLCGYLYELASLYMTFYEACPVLK---EG 545

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
               +V   RL+L    ++ ++   D+L I
Sbjct: 546  VEPSVRDSRLVLCNLVSRTLETGLDLLGI 574



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 183/327 (55%), Gaps = 33/327 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K  K      NP ++AQ I          N  ++ +  K E+A PG
Sbjct: 35  QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAQKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+ L   +  + +K       + VN    P      +V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82  FINIHLKPEFLAQSVKAANSDAKLAVNEHANPQ-----KVVVDYSSPNLAKEMHVGHLRS 136

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFY 295
           TIIGD+I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   S  +ADL+ FY
Sbjct: 137 TIIGDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDSVALADLETFY 196

Query: 296 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 354
           +++KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+ 
Sbjct: 197 RDAKKRFDDEEGFADKARDYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYTRLNVTLTQA 256

Query: 355 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 407
               ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y
Sbjct: 257 DIMAESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLY 316

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTDHR 434
            T+DLAA   R  +  AD I+   D R
Sbjct: 317 ATTDLAACDYRSNKLGADRILIFVDAR 343



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 183/327 (55%), Gaps = 33/327 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K  K      NP ++AQ I          N  ++ +  K E+A PG
Sbjct: 35   QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAQKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+ L   +  + +K       + VN    P      +V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIHLKPEFLAQSVKAANSDAKLAVNEHANPQ-----KVVVDYSSPNLAKEMHVGHLRS 136

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFY 1312
            TIIGD+I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   S  +ADL+ FY
Sbjct: 137  TIIGDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDSVALADLETFY 196

Query: 1313 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 1371
            +++KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+ 
Sbjct: 197  RDAKKRFDDEEGFADKARDYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYTRLNVTLTQA 256

Query: 1372 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 1424
                ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y
Sbjct: 257  DIMAESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLY 316

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             T+DLAA   R  +  AD I+   D R
Sbjct: 317  ATTDLAACDYRSNKLGADRILIFVDAR 343


>gi|149198116|ref|ZP_01875163.1| arginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138718|gb|EDM27124.1| arginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 587

 Score =  366 bits (940), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 227/579 (39%), Positives = 326/579 (56%), Gaps = 55/579 (9%)

Query: 513  KFGDFQCNDAMALC-KIFKDKGEKKNPFDIAQSIAS-VVTSELATNPSLAKVIDKIEVAK 570
            KFGD+QCN +M L  K+ K +GEK NP  +A +I   +  SEL+  P         E+A 
Sbjct: 37   KFGDYQCNVSMELAGKLGKARGEKVNPRQVATAIMEKLEVSELSEEP---------EIAG 87

Query: 571  PGFVNVFLSRV----YAGEQIKD--IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHL 624
            PGF+N  L       YA   ++D  + +  V  P      RVLVDFS PN+AKEMHVGHL
Sbjct: 88   PGFINFKLKNDVLADYAITMLRDERLGIAKVANPE-----RVLVDFSGPNLAKEMHVGHL 142

Query: 625  RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQ 682
            RSTIIGD+++R +E+ GH+V+R+NHVGDWGTQFGMLI  ++   P  L       IADL+
Sbjct: 143  RSTIIGDSVARFMEFEGHEVLRMNHVGDWGTQFGMLIQFIRTTRPGALENPENFEIADLE 202

Query: 683  AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
             FY+E+KK FDE + FK  A + VV LQ  D      W++ C+ S +   +IY +L++ +
Sbjct: 203  DFYREAKKMFDESDEFKDAARRAVVDLQSGDEATLAVWKVFCEESLKHCHEIYGQLDIKI 262

Query: 743  TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWG--------EDRGSIPMTIVKSDGG 794
            ++RGES Y   ++ +V  L+  G  E  +G    WG        +D   +P  + KSDGG
Sbjct: 263  SDRGESAYNDMLKDVVEDLKSAGKAEQTEG---AWGVFLDGYKNKDDEPLPTIVQKSDGG 319

Query: 795  FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILN-PNKTRMDFVG 853
            + Y T+DLAAIR R  E+K D ++YVTD  Q  HF  + E ++   +++   K  M  +G
Sbjct: 320  YIYATTDLAAIRYRFAEQKTDKLIYVTDARQKTHFDQVFEISE---LMDWAPKDSMRHIG 376

Query: 854  FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPT----ELSEAQQ 909
            FG++LG D K FKTR+G TVKL +LL E   R+ +  +      ELTP     E  E   
Sbjct: 377  FGMMLGADGKPFKTRTGGTVKLKDLLAEAESRAGELAR------ELTPGLSEEEYKEIAF 430

Query: 910  AVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLR 969
            A   G +KY+DLSH    DY F ++KML   GNTA+Y+L  + R   ++R AG++ + L 
Sbjct: 431  AAGLGGVKYSDLSHGVATDYKFDWNKMLATDGNTAIYILMTFARTRGLSRKAGVDVDSLV 490

Query: 970  VAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCY 1029
             A  +    L  E+E  L K +    DV   V RDL  H L  +LY+++  F  F+++C 
Sbjct: 491  DA--TDLARLTEEQEIKLIKKIASTPDVWQGVVRDLAPHLLLNHLYELARDFGSFWNSCP 548

Query: 1030 CIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
             ++ + E     +   RL LA    +V+K    ++ I+T
Sbjct: 549  IMKLEDE----ELKQSRLALAGGVGRVLKWGLSMVGIQT 583



 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 201/340 (59%), Gaps = 38/340 (11%)

Query: 123 KFGDFQCNDAMALC-KIFKDKGEKKNPFDIAQSIAS-VVTSELATNPSLAKVIDKIEVAK 180
           KFGD+QCN +M L  K+ K +GEK NP  +A +I   +  SEL+  P         E+A 
Sbjct: 37  KFGDYQCNVSMELAGKLGKARGEKVNPRQVATAIMEKLEVSELSEEP---------EIAG 87

Query: 181 PGFVNVFLSRV----YAGEQIKD--IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHL 234
           PGF+N  L       YA   ++D  + +  V  P      RVLVDFS PN+AKEMHVGHL
Sbjct: 88  PGFINFKLKNDVLADYAITMLRDERLGIAKVANPE-----RVLVDFSGPNLAKEMHVGHL 142

Query: 235 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQ 292
           RSTIIGD+++R +E+ GH+V+R+NHVGDWGTQFGMLI  ++   P  L       IADL+
Sbjct: 143 RSTIIGDSVARFMEFEGHEVLRMNHVGDWGTQFGMLIQFIRTTRPGALENPENFEIADLE 202

Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
            FY+E+KK FDE + FK  A + VV LQ  D      W++ C+ S +   +IY +L++ +
Sbjct: 203 DFYREAKKMFDESDEFKDAARRAVVDLQSGDEATLAVWKVFCEESLKHCHEIYGQLDIKI 262

Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWG--------EDRGSIPMTIVKSDGG 404
           ++RGES Y   ++ +V  L+  G  E  +G    WG        +D   +P  + KSDGG
Sbjct: 263 SDRGESAYNDMLKDVVEDLKSAGKAEQTEG---AWGVFLDGYKNKDDEPLPTIVQKSDGG 319

Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           + Y T+DLAAIR R  E+K D ++YVTD R    + QV +
Sbjct: 320 YIYATTDLAAIRYRFAEQKTDKLIYVTDARQKTHFDQVFE 359



 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 201/340 (59%), Gaps = 38/340 (11%)

Query: 1140 KFGDFQCNDAMALC-KIFKDKGEKKNPFDIAQSIAS-VVTSELATNPSLAKVIDKIEVAK 1197
            KFGD+QCN +M L  K+ K +GEK NP  +A +I   +  SEL+  P         E+A 
Sbjct: 37   KFGDYQCNVSMELAGKLGKARGEKVNPRQVATAIMEKLEVSELSEEP---------EIAG 87

Query: 1198 PGFVNVFLSRV----YAGEQIKD--IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHL 1251
            PGF+N  L       YA   ++D  + +  V  P      RVLVDFS PN+AKEMHVGHL
Sbjct: 88   PGFINFKLKNDVLADYAITMLRDERLGIAKVANPE-----RVLVDFSGPNLAKEMHVGHL 142

Query: 1252 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQ 1309
            RSTIIGD+++R +E+ GH+V+R+NHVGDWGTQFGMLI  ++   P  L       IADL+
Sbjct: 143  RSTIIGDSVARFMEFEGHEVLRMNHVGDWGTQFGMLIQFIRTTRPGALENPENFEIADLE 202

Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
             FY+E+KK FDE + FK  A + VV LQ  D      W++ C+ S +   +IY +L++ +
Sbjct: 203  DFYREAKKMFDESDEFKDAARRAVVDLQSGDEATLAVWKVFCEESLKHCHEIYGQLDIKI 262

Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWG--------EDRGSIPMTIVKSDGG 1421
            ++RGES Y   ++ +V  L+  G  E  +G    WG        +D   +P  + KSDGG
Sbjct: 263  SDRGESAYNDMLKDVVEDLKSAGKAEQTEG---AWGVFLDGYKNKDDEPLPTIVQKSDGG 319

Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            + Y T+DLAAIR R  E+K D ++YVTD R    + QV +
Sbjct: 320  YIYATTDLAAIRYRFAEQKTDKLIYVTDARQKTHFDQVFE 359


>gi|421493637|ref|ZP_15940992.1| ARGS [Morganella morganii subsp. morganii KT]
 gi|400192014|gb|EJO25155.1| ARGS [Morganella morganii subsp. morganii KT]
          Length = 532

 Score =  366 bits (940), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 308/521 (59%), Gaps = 27/521 (5%)

Query: 559  LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 618
            L  + +K E+A PGF+N+FLS  +   Q++  + +     T  + + + +D+S+PN+AK+
Sbjct: 24   LDGIAEKTEIAGPGFINIFLSPDWLTTQLETALADDKLGLTPVEPMTIAIDYSAPNVAKQ 83

Query: 619  MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 678
            MHVGHLRSTIIGD  +R  EYLGH V+R NHVGDWGTQFGMLIA+L+ K  +       +
Sbjct: 84   MHVGHLRSTIIGDAAARTQEYLGHKVIRCNHVGDWGTQFGMLIAYLE-KMQNEDAGDMAL 142

Query: 679  ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 738
            ADL+AFY+E+KK +DEDE+F +RA   VV LQ  D   +  W  + D++ +  Q+ Y+RL
Sbjct: 143  ADLEAFYREAKKHYDEDEVFAERARGYVVKLQGGDEYCRTMWRKLVDITMQQNQETYNRL 202

Query: 739  NVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMT 787
            NVTLTE    GES Y   +  +V  L  + + E  +G  +++        GE  G I   
Sbjct: 203  NVTLTEDDVMGESLYNDMLPGIVSDLLNRRIAEESEGAIVVYLDEFKNKEGEPMGVI--- 259

Query: 788  IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKT 847
            I K DGG+ Y T+D+A  + R +   AD ++Y  D  Q  H        +KAG + P   
Sbjct: 260  IRKKDGGYLYTTTDIACAKYRHDVLHADRVLYYIDSRQHQHLMQAWTIVRKAGYI-PESM 318

Query: 848  RMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEA 907
             ++   FG++LG+D K FKTR+G T++LS+LLDE + R+   +++KN  +++   EL + 
Sbjct: 319  TLEHHMFGMMLGKDGKPFKTRAGGTIRLSDLLDEAVERAEKLIREKN--SDMPEDELKQL 376

Query: 908  QQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSED 967
             + V  G +KYADLS +R  DY+F +D ML   GNTA Y+ YAYTR+AS+ + A I+++ 
Sbjct: 377  AEVVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASVFKRADIDADS 436

Query: 968  LRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDN 1027
            L     + P+ L  + E  LA  LL+  + +  V R+   H +C YLYD++  FS FY++
Sbjct: 437  L-----TQPIILTDDHERQLAARLLQFEETITAVAREGLPHMMCSYLYDLAGLFSGFYEH 491

Query: 1028 CYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
            C  +  ++E     +   RL LA  T K +K   D L I T
Sbjct: 492  CPILAAESE----ELRQSRLKLALLTQKTLKAGLDTLGIGT 528



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/338 (38%), Positives = 191/338 (56%), Gaps = 18/338 (5%)

Query: 169 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 228
           L  + +K E+A PGF+N+FLS  +   Q++  + +     T  + + + +D+S+PN+AK+
Sbjct: 24  LDGIAEKTEIAGPGFINIFLSPDWLTTQLETALADDKLGLTPVEPMTIAIDYSAPNVAKQ 83

Query: 229 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 288
           MHVGHLRSTIIGD  +R  EYLGH V+R NHVGDWGTQFGMLIA+L+ K  +       +
Sbjct: 84  MHVGHLRSTIIGDAAARTQEYLGHKVIRCNHVGDWGTQFGMLIAYLE-KMQNEDAGDMAL 142

Query: 289 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 348
           ADL+AFY+E+KK +DEDE+F +RA   VV LQ  D   +  W  + D++ +  Q+ Y+RL
Sbjct: 143 ADLEAFYREAKKHYDEDEVFAERARGYVVKLQGGDEYCRTMWRKLVDITMQQNQETYNRL 202

Query: 349 NVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMT 397
           NVTLTE    GES Y   +  +V  L  + + E  +G  +++        GE  G I   
Sbjct: 203 NVTLTEDDVMGESLYNDMLPGIVSDLLNRRIAEESEGAIVVYLDEFKNKEGEPMGVI--- 259

Query: 398 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSS 457
           I K DGG+ Y T+D+A  + R +   AD ++Y  D R +  ++QA     K   I  S +
Sbjct: 260 IRKKDGGYLYTTTDIACAKYRHDVLHADRVLYYIDSRQHQHLMQAWTIVRKAGYIPESMT 319

Query: 458 SQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQVA 492
            +       +     P + R      LSD+   AV+ A
Sbjct: 320 LEHHMFGMMLGKDGKPFKTRAGGTIRLSDLLDEAVERA 357



 Score =  219 bits (558), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 118/284 (41%), Positives = 173/284 (60%), Gaps = 15/284 (5%)

Query: 1186 LAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKE 1245
            L  + +K E+A PGF+N+FLS  +   Q++  + +     T  + + + +D+S+PN+AK+
Sbjct: 24   LDGIAEKTEIAGPGFINIFLSPDWLTTQLETALADDKLGLTPVEPMTIAIDYSAPNVAKQ 83

Query: 1246 MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 1305
            MHVGHLRSTIIGD  +R  EYLGH V+R NHVGDWGTQFGMLIA+L+ K  +       +
Sbjct: 84   MHVGHLRSTIIGDAAARTQEYLGHKVIRCNHVGDWGTQFGMLIAYLE-KMQNEDAGDMAL 142

Query: 1306 ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 1365
            ADL+AFY+E+KK +DEDE+F +RA   VV LQ  D   +  W  + D++ +  Q+ Y+RL
Sbjct: 143  ADLEAFYREAKKHYDEDEVFAERARGYVVKLQGGDEYCRTMWRKLVDITMQQNQETYNRL 202

Query: 1366 NVTLTE---RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW--------GEDRGSIPMT 1414
            NVTLTE    GES Y   +  +V  L  + + E  +G  +++        GE  G I   
Sbjct: 203  NVTLTEDDVMGESLYNDMLPGIVSDLLNRRIAEESEGAIVVYLDEFKNKEGEPMGVI--- 259

Query: 1415 IVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ 1458
            I K DGG+ Y T+D+A  + R +   AD ++Y  D R +  ++Q
Sbjct: 260  IRKKDGGYLYTTTDIACAKYRHDVLHADRVLYYIDSRQHQHLMQ 303


>gi|77359609|ref|YP_339184.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|109895020|sp|Q3IHI4.1|SYR_PSEHT RecName: Full=Arginine--tRNA ligase; AltName: Full=Arginyl-tRNA
            synthetase; Short=ArgRS
 gi|76874520|emb|CAI85741.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 580

 Score =  366 bits (940), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 223/569 (39%), Positives = 329/569 (57%), Gaps = 44/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K  K      NP ++AQ I          N  ++ + +K E+A PG
Sbjct: 35   QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAEKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+ L   +  + +K       + VN    P      +V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIHLKPEFLAQSVKAANSDAKLAVNEHANPQ-----KVVVDYSSPNLAKEMHVGHLRS 136

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFY 685
            TIIGD I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   +  +ADL+ FY
Sbjct: 137  TIIGDAIVRALEFRGDSVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDTVALADLETFY 196

Query: 686  KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 744
            +++KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+ 
Sbjct: 197  RDAKKRFDDEEGFADKARNYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQA 256

Query: 745  --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 797
                ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y
Sbjct: 257  DIMAESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLY 316

Query: 798  DTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
             T+DLAA   R  +  AD I+   D  Q +HF  +E  A+KAG L  ++T  +F  FG +
Sbjct: 317  ATTDLAACDYRSNKLGADRILIFVDARQSLHFNQVELTARKAGFLR-DETSYEFCPFGTM 375

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIK 917
            +G D K FKTR+G TVKL++LL+E + R+  KL +  R ++L+  E SE  + V  G +K
Sbjct: 376  MGADNKPFKTRTGGTVKLADLLEESINRAAIKLAE--RESDLSEQERSEIARKVGIGAVK 433

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
            YADLS +R  DY+F++D ML   G TA YL YAYTRI SI R +G+++  L     ++ V
Sbjct: 434  YADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRIRSIFRKSGVDAATL-----NSNV 488

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1037
            ++   +E ALA  LL++ +VL L+  +   H LC YLY++++ +  FY+ C  ++   EG
Sbjct: 489  TIVEPQEKALALKLLQLEEVLDLMITEATPHVLCGYLYELASLYMTFYEACPVLK---EG 545

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
                V   RL+L    +K ++   D+L I
Sbjct: 546  VEPNVRDSRLVLCNLVSKTLETGLDLLGI 574



 Score =  217 bits (553), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 183/327 (55%), Gaps = 33/327 (10%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K  K      NP ++AQ I          N  ++ + +K E+A PG
Sbjct: 35  QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAEKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+ L   +  + +K       + VN    P      +V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82  FINIHLKPEFLAQSVKAANSDAKLAVNEHANPQ-----KVVVDYSSPNLAKEMHVGHLRS 136

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFY 295
           TIIGD I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   +  +ADL+ FY
Sbjct: 137 TIIGDAIVRALEFRGDSVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDTVALADLETFY 196

Query: 296 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 354
           +++KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+ 
Sbjct: 197 RDAKKRFDDEEGFADKARNYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQA 256

Query: 355 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 407
               ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y
Sbjct: 257 DIMAESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLY 316

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTDHR 434
            T+DLAA   R  +  AD I+   D R
Sbjct: 317 ATTDLAACDYRSNKLGADRILIFVDAR 343



 Score =  217 bits (553), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 183/327 (55%), Gaps = 33/327 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K  K      NP ++AQ I          N  ++ + +K E+A PG
Sbjct: 35   QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAEKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+ L   +  + +K       + VN    P      +V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIHLKPEFLAQSVKAANSDAKLAVNEHANPQ-----KVVVDYSSPNLAKEMHVGHLRS 136

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFY 1312
            TIIGD I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   +  +ADL+ FY
Sbjct: 137  TIIGDAIVRALEFRGDSVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDTVALADLETFY 196

Query: 1313 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 1371
            +++KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+ 
Sbjct: 197  RDAKKRFDDEEGFADKARNYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQA 256

Query: 1372 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 1424
                ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y
Sbjct: 257  DIMAESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLY 316

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             T+DLAA   R  +  AD I+   D R
Sbjct: 317  ATTDLAACDYRSNKLGADRILIFVDAR 343


>gi|388470646|ref|ZP_10144855.1| arginine--tRNA ligase [Pseudomonas synxantha BG33R]
 gi|388007343|gb|EIK68609.1| arginine--tRNA ligase [Pseudomonas synxantha BG33R]
          Length = 578

 Score =  366 bits (940), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 330/594 (55%), Gaps = 42/594 (7%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQALTQLVNEGVLPEGLSPAIQVENTRDK---THGDFASNIAMMLSK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
            K  P D+A+ I       +A  P+ A V  K E+A PGF+N F +      ++   + + 
Sbjct: 58   K--PRDLAEKI-------IAALPADASVT-KAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 595  -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
             +         RV++D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVGDW
Sbjct: 108  KIGAHKAGDTQRVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDW 167

Query: 654  GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
            GTQFGML+A+LQ+  P     S  +ADL+ FY+ +KKRFDE E F  RA   VV LQ  D
Sbjct: 168  GTQFGMLMAYLQEN-P---ITSNELADLENFYRAAKKRFDESEEFADRARGLVVKLQAGD 223

Query: 714  PDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELD 770
             +    W    ++S    Q+IY+ LNV LT     GES Y   +  +V  L+ KGLL   
Sbjct: 224  QECLALWNRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLVES 283

Query: 771  DGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQ 825
            +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D  Q
Sbjct: 284  NGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 826  GVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRR 885
             +HF+ + E A++AG +  +   M+ +GFG + G D + FKTR G TVKL +LL E   R
Sbjct: 344  ALHFQQVFEVARRAGFVT-HPMHMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAQER 402

Query: 886  SLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
            + + +K+KN   EL   +L    + V  G +KYADLS +R  DY F+FD ML+  GNTA 
Sbjct: 403  AYNLVKEKN--PELAEADLRNIARVVGIGAVKYADLSKHRTSDYSFNFDLMLNFEGNTAP 460

Query: 946  YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
            YLLYAYTR+A + R  G   +D         +   HE+E  LA  L + ++VL  V    
Sbjct: 461  YLLYAYTRVAGVFRKLG---KDFSEVEGQIVLDAAHEQE--LAAKLAQFSEVLNSVGEKG 515

Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
              H LC YLY+++  FS FY+NC  +  D E + ++    RL LA    + +K+
Sbjct: 516  TPHILCTYLYEVAGLFSSFYENCPILTADDEAQKQS----RLRLAALAGRTLKQ 565



 Score =  223 bits (568), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 160/443 (36%), Positives = 229/443 (51%), Gaps = 37/443 (8%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQALTQLVNEGVLPEGLSPAIQVENTRDK---THGDFASNIAMMLSK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
           K  P D+A+ I       +A  P+ A V  K E+A PGF+N F +      ++   + + 
Sbjct: 58  K--PRDLAEKI-------IAALPADASVT-KAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 205 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
            +         RV++D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVGDW
Sbjct: 108 KIGAHKAGDTQRVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDW 167

Query: 264 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
           GTQFGML+A+LQ+  P     S  +ADL+ FY+ +KKRFDE E F  RA   VV LQ  D
Sbjct: 168 GTQFGMLMAYLQEN-P---ITSNELADLENFYRAAKKRFDESEEFADRARGLVVKLQAGD 223

Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELD 380
            +    W    ++S    Q+IY+ LNV LT     GES Y   +  +V  L+ KGLL   
Sbjct: 224 QECLALWNRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLVES 283

Query: 381 DGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHR- 434
           +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D R 
Sbjct: 284 NGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 435 SYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV----PVRDRMSVRDYLSDVFTHAVQ 490
           + H   Q + E  ++ G  +            MN     P + R      L D+ T A +
Sbjct: 344 ALH--FQQVFEVARRAGFVTHPMHMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAQE 401

Query: 491 VAFPELGDKTASVASTNEKYVHK 513
            A+  + +K   +A  + + + +
Sbjct: 402 RAYNLVKEKNPELAEADLRNIAR 424



 Score =  222 bits (565), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/369 (39%), Positives = 202/369 (54%), Gaps = 33/369 (8%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V +T +K     GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQALTQLVNEGVLPEGLSPAIQVENTRDK---THGDFASNIAMMLSK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
            K  P D+A+ I       +A  P+ A V  K E+A PGF+N F +      ++   + + 
Sbjct: 58   K--PRDLAEKI-------IAALPADASVT-KAEIAGPGFINFFQNTQALASRLDAALADA 107

Query: 1222 -VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
             +         RV++D S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R NHVGDW
Sbjct: 108  KIGAHKAGDTQRVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDW 167

Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
            GTQFGML+A+LQ+  P     S  +ADL+ FY+ +KKRFDE E F  RA   VV LQ  D
Sbjct: 168  GTQFGMLMAYLQEN-P---ITSNELADLENFYRAAKKRFDESEEFADRARGLVVKLQAGD 223

Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKGLLELD 1397
             +    W    ++S    Q+IY+ LNV LT     GES Y   +  +V  L+ KGLL   
Sbjct: 224  QECLALWNRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVNDLKAKGLLVES 283

Query: 1398 DGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRS 1452
            +G + ++ E     D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y  D R 
Sbjct: 284  NGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 1453 ---YHQVLQ 1458
               + QV +
Sbjct: 344  ALHFQQVFE 352


>gi|171473734|gb|ACB47040.1| putative class Ic arginyl-tRNA synthetase [Micromonospora chersina]
          Length = 572

 Score =  366 bits (939), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 222/564 (39%), Positives = 316/564 (56%), Gaps = 40/564 (7%)

Query: 516  DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 575
            DFQ + A+AL +        + P  IA        +E+     LA +    EV+ PGF+N
Sbjct: 34   DFQSDAALALARRLG-----RPPRAIA--------TEVLERAELADLCSATEVSGPGFLN 80

Query: 576  VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
            + ++       +  +  +   GV  P       V+VD+S+PN+AKEMHVGHLRST+IGD 
Sbjct: 81   LTVADDALAGLVSALAADPRLGV--PEAAAPETVVVDYSAPNVAKEMHVGHLRSTVIGDA 138

Query: 633  ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 692
             +RLLE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL +FYK ++ +F
Sbjct: 139  AARLLEWLGHRVLRANHLGDWGTPFGMLIEHLVDLGEAEAAQELSMGDLDSFYKAARAKF 198

Query: 693  DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 749
            D DE F++RA Q VVALQ  D    + W ++ + S R F  +YD L+VTLTER   GES 
Sbjct: 199  DADEAFRERARQRVVALQGGDATTLRLWRLLVEQSERYFLTVYDLLDVTLTERDFHGESS 258

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  L++ GLL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259  YNDLLGPVVEDLDRLGLLRSSDGAACVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAA 318

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            IR R     A  ++YV  L Q  HF ++   A +AG L P   R + VGFG +LG D + 
Sbjct: 319  IRHRTGTLGATRLLYVVGLPQRRHFEMVYAAAAQAGWLAP-PARAEHVGFGSILGPDGRM 377

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
             ++R+  +VKL  LL+E + R+    +++N   EL   E +E  +AV  G +KYADLS +
Sbjct: 378  LRSRASGSVKLVGLLEEAVARATALARERN--PELGEAEAAEVGRAVGIGAVKYADLSSD 435

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R+ DYV  +++ML   GN+A YL YA++RI SI R AG+       A    PVSL    E
Sbjct: 436  RHKDYVLDWERMLSLDGNSAPYLQYAHSRIRSIFRRAGV------AARPEAPVSLVDPAE 489

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
             ALA  L+    V+  V  +L  HHL   L  ++ AFS FY+ C  +  D     + V  
Sbjct: 490  RALAFELVGFGAVVGAVAENLEFHHLTACLSRLAAAFSAFYERCPVLRAD-----EPVRE 544

Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
             RL+L + TA+V+++   +L IRT
Sbjct: 545  SRLVLCDLTARVLRQGLHLLGIRT 568



 Score =  220 bits (560), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 179/317 (56%), Gaps = 26/317 (8%)

Query: 126 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 185
           DFQ + A+AL +        + P  IA        +E+     LA +    EV+ PGF+N
Sbjct: 34  DFQSDAALALARRLG-----RPPRAIA--------TEVLERAELADLCSATEVSGPGFLN 80

Query: 186 VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
           + ++       +  +  +   GV  P       V+VD+S+PN+AKEMHVGHLRST+IGD 
Sbjct: 81  LTVADDALAGLVSALAADPRLGV--PEAAAPETVVVDYSAPNVAKEMHVGHLRSTVIGDA 138

Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
            +RLLE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL +FYK ++ +F
Sbjct: 139 AARLLEWLGHRVLRANHLGDWGTPFGMLIEHLVDLGEAEAAQELSMGDLDSFYKAARAKF 198

Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 359
           D DE F++RA Q VVALQ  D    + W ++ + S R F  +YD L+VTLTER   GES 
Sbjct: 199 DADEAFRERARQRVVALQGGDATTLRLWRLLVEQSERYFLTVYDLLDVTLTERDFHGESS 258

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  L++ GLL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259 YNDLLGPVVEDLDRLGLLRSSDGAACVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAA 318

Query: 415 IRQRIEEEKADWIVYVT 431
           IR R     A  ++YV 
Sbjct: 319 IRHRTGTLGATRLLYVV 335



 Score =  220 bits (560), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 179/317 (56%), Gaps = 26/317 (8%)

Query: 1143 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVN 1202
            DFQ + A+AL +        + P  IA        +E+     LA +    EV+ PGF+N
Sbjct: 34   DFQSDAALALARRLG-----RPPRAIA--------TEVLERAELADLCSATEVSGPGFLN 80

Query: 1203 VFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
            + ++       +  +  +   GV  P       V+VD+S+PN+AKEMHVGHLRST+IGD 
Sbjct: 81   LTVADDALAGLVSALAADPRLGV--PEAAAPETVVVDYSAPNVAKEMHVGHLRSTVIGDA 138

Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 1319
             +RLLE+LGH V+R NH+GDWGT FGMLI HL D       +   + DL +FYK ++ +F
Sbjct: 139  AARLLEWLGHRVLRANHLGDWGTPFGMLIEHLVDLGEAEAAQELSMGDLDSFYKAARAKF 198

Query: 1320 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESF 1376
            D DE F++RA Q VVALQ  D    + W ++ + S R F  +YD L+VTLTER   GES 
Sbjct: 199  DADEAFRERARQRVVALQGGDATTLRLWRLLVEQSERYFLTVYDLLDVTLTERDFHGESS 258

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  L++ GLL   DG   ++     G D   +P+ + KSDGG+ Y  +DLAA
Sbjct: 259  YNDLLGPVVEDLDRLGLLRSSDGAACVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAA 318

Query: 1432 IRQRIEEEKADWIVYVT 1448
            IR R     A  ++YV 
Sbjct: 319  IRHRTGTLGATRLLYVV 335


>gi|414071604|ref|ZP_11407569.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
 gi|410805966|gb|EKS11967.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
          Length = 580

 Score =  366 bits (939), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 222/566 (39%), Positives = 331/566 (58%), Gaps = 38/566 (6%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K  K      NP ++AQ I          N  ++ +  K E+A PG
Sbjct: 35   QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAQKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIKDIIVNGVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTII 629
            F+N+ L   +  + ++    N      +N   K  +V+VD+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIHLKPEFLAQSVQ--AANSDAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTII 139

Query: 630  GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 688
            GD+I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   S  +ADL+ FY+++
Sbjct: 140  GDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDSVALADLETFYRDA 199

Query: 689  KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 745
            KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+    
Sbjct: 200  KKRFDDEEGFADKARDYVVKLQGGDTHCEKLWKLFIATSVKHSEEVYKRLNVTLTQADIM 259

Query: 746  GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTS 800
             ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y T+
Sbjct: 260  AESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATT 319

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            DLAA   R  +  AD I+   D  Q +HF  +E  A+KAG+L  ++T  +F  FG ++G 
Sbjct: 320  DLAACDYRSNKLGADRILIFVDARQNLHFNQVELTARKAGLLR-DETSYEFCPFGTMMGA 378

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D K FKTR+G TVKL++LL+E + R+  KL +  R ++L+ ++ SE  + V  G +KYAD
Sbjct: 379  DNKPFKTRTGGTVKLADLLEESINRAAAKLAE--RESDLSDSDRSEIARKVGIGAVKYAD 436

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
            LS +R  DY+F++D ML   G TA YL YAYTRI SI R +G+++  L     ++ V + 
Sbjct: 437  LSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRIRSIFRKSGVDATTL-----NSDVVIV 491

Query: 981  HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
              +E ALA  LL++ +VL L+  +   H LC YLY++++ +  FY+ C  ++   EG   
Sbjct: 492  EPQEKALALKLLQLEEVLDLMINEATPHVLCGYLYELASLYMTFYEACPVLK---EGVEP 548

Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNI 1066
            +V   RL+L    +K ++   D+L I
Sbjct: 549  SVRDSRLVLCNLVSKTLETGLDLLGI 574



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/407 (34%), Positives = 214/407 (52%), Gaps = 32/407 (7%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K  K      NP ++AQ I          N  ++ +  K E+A PG
Sbjct: 35  QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAQKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTII 239
           F+N+ L   +  + ++    N      +N   K  +V+VD+SSPN+AKEMHVGHLRSTII
Sbjct: 82  FINIHLKPEFLAQSVQ--AANSDAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTII 139

Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 298
           GD+I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   S  +ADL+ FY+++
Sbjct: 140 GDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDSVALADLETFYRDA 199

Query: 299 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 355
           KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+    
Sbjct: 200 KKRFDDEEGFADKARDYVVKLQGGDTHCEKLWKLFIATSVKHSEEVYKRLNVTLTQADIM 259

Query: 356 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTS 410
            ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y T+
Sbjct: 260 AESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATT 319

Query: 411 DLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM--- 467
           DLAA   R  +  AD I+   D R      Q +    +K G+    +S        M   
Sbjct: 320 DLAACDYRSNKLGADRILIFVDARQNLHFNQ-VELTARKAGLLRDETSYEFCPFGTMMGA 378

Query: 468 -NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 513
            N P + R      L+D+   ++  A  +L ++ + ++ ++   + +
Sbjct: 379 DNKPFKTRTGGTVKLADLLEESINRAAAKLAERESDLSDSDRSEIAR 425



 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 183/324 (56%), Gaps = 27/324 (8%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K  K      NP ++AQ I          N  ++ +  K E+A PG
Sbjct: 35   QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAQKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIKDIIVNGVQPPTLN---KKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
            F+N+ L   +  + ++    N      +N   K  +V+VD+SSPN+AKEMHVGHLRSTII
Sbjct: 82   FINIHLKPEFLAQSVQ--AANSDAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTII 139

Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKES 1315
            GD+I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   S  +ADL+ FY+++
Sbjct: 140  GDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDSVALADLETFYRDA 199

Query: 1316 KKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---R 1372
            KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+    
Sbjct: 200  KKRFDDEEGFADKARDYVVKLQGGDTHCEKLWKLFIATSVKHSEEVYKRLNVTLTQADIM 259

Query: 1373 GESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTS 1427
             ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y T+
Sbjct: 260  AESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATT 319

Query: 1428 DLAAIRQRIEEEKADWIVYVTDHR 1451
            DLAA   R  +  AD I+   D R
Sbjct: 320  DLAACDYRSNKLGADRILIFVDAR 343


>gi|398870789|ref|ZP_10626109.1| arginyl-tRNA synthetase [Pseudomonas sp. GM74]
 gi|398207418|gb|EJM94167.1| arginyl-tRNA synthetase [Pseudomonas sp. GM74]
          Length = 578

 Score =  366 bits (939), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 328/599 (54%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVAKTEIAGPGFLNFFQNTDALATRLDAALADA 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +KDKN    L   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYTLVKDKN--PTLAEAELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  ++L  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEV-----DGQIVLEAAHEHELAAKLAQFGEILNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VSEKGTPHILCTYLYDVAGLFSSFYENCPILAADTPAQMQS----RLRLAALTGRTLKQ 565



 Score =  224 bits (570), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 159/446 (35%), Positives = 225/446 (50%), Gaps = 43/446 (9%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENVAKTEIAGPGFLNFFQNTDALATRLDAALADA 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108 HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTH 487
            D R      Q  A   K   ++     +  G          P + R      L D+ T 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTE 398

Query: 488 AVQVAFPELGDKTASVASTNEKYVHK 513
           A + A+  + DK  ++A    + + K
Sbjct: 399 AQERAYTLVKDKNPTLAEAELRNIAK 424



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 198/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVAKTEIAGPGFLNFFQNTDALATRLDAALADA 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|398856867|ref|ZP_10612581.1| arginyl-tRNA synthetase [Pseudomonas sp. GM79]
 gi|398242261|gb|EJN27881.1| arginyl-tRNA synthetase [Pseudomonas sp. GM79]
          Length = 578

 Score =  366 bits (939), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 330/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKAEIAGPGFLNFFQNTQALATRLDAALADD 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE   F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESAEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            LL   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y 
Sbjct: 279  LLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ + + A+ AG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFQVARLAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +K+KN   EL   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYTLVKEKN--PELAEDELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        ++LE   E  LA  L +  ++L  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEVE-----GQIALEAPHEHELAAKLAQFGEILNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VSDKGTPHILCTYLYDVAGLFSSFYENCPILGADTPAQMQS----RLRLAALTGRTLKQ 565



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/374 (39%), Positives = 202/374 (54%), Gaps = 43/374 (11%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENVSKAEIAGPGFLNFFQNTQALATRLDAALADD 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
            I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108 HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE   F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESAEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           LL   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y 
Sbjct: 279 LLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYF 338

Query: 431 TDHRS---YHQVLQ 441
            D R    + QV Q
Sbjct: 339 VDQRQALHFQQVFQ 352



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/374 (39%), Positives = 202/374 (54%), Gaps = 43/374 (11%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVSKAEIAGPGFLNFFQNTQALATRLDAALADD 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
             I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG +V+R N
Sbjct: 108  HIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE   F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESAEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  DPD    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDPDCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            LL   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R    KAD  +Y 
Sbjct: 279  LLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYF 338

Query: 1448 TDHRS---YHQVLQ 1458
             D R    + QV Q
Sbjct: 339  VDQRQALHFQQVFQ 352


>gi|359440746|ref|ZP_09230659.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
 gi|392533212|ref|ZP_10280349.1| arginyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
 gi|358037452|dbj|GAA66908.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
          Length = 580

 Score =  366 bits (939), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 222/569 (39%), Positives = 332/569 (58%), Gaps = 44/569 (7%)

Query: 513  KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
            +FGD+Q N AM   K  K      NP ++AQ I          N  ++ +  K E+A PG
Sbjct: 35   QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAQKTEIAGPG 81

Query: 573  FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
            F+N+ L   +  + ++       + VN    P      +V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIHLKPEFLAQSVQAANSDAKLAVNEHANPQ-----KVVVDYSSPNLAKEMHVGHLRS 136

Query: 627  TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFY 685
            TIIGD+I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   S  +ADL+ FY
Sbjct: 137  TIIGDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDSVALADLETFY 196

Query: 686  KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 744
            +++KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+ 
Sbjct: 197  RDAKKRFDDEEGFADKARNYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQA 256

Query: 745  --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 797
                ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y
Sbjct: 257  DIMAESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLY 316

Query: 798  DTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVV 857
             T+DLAA   R  +  AD I+   D  Q +HF  +E  A+KAG+L  ++T  +F  FG +
Sbjct: 317  ATTDLAACDYRSNKLGADRILIFVDARQNLHFNQVELTARKAGLLR-DETSYEFCPFGTM 375

Query: 858  LGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIK 917
            +G D K FKTR+G TVKL++LL+E + R+  KL +  R ++L+ ++ SE  + V  G +K
Sbjct: 376  MGADNKPFKTRTGGTVKLADLLEESINRAAAKLAE--RESDLSDSDRSEIARKVGIGAVK 433

Query: 918  YADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPV 977
            YADLS +R  DY+F++D ML   G TA YL YAYTRI SI R +G+++  L     ++ V
Sbjct: 434  YADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRIRSIFRKSGVDAATL-----NSDV 488

Query: 978  SLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1037
            ++   +E ALA  LL++ +VL L+  +   H LC YLY++++ +  FY+ C  ++   EG
Sbjct: 489  AIIEPQEKALALKLLQLEEVLDLMISEATPHVLCGYLYELASLYMTFYEACPVLK---EG 545

Query: 1038 KIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
               +V   RL+L    +K ++   D+L I
Sbjct: 546  VEPSVRDSRLVLCNLVSKTLETGLDLLGI 574



 Score =  217 bits (553), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/410 (34%), Positives = 214/410 (52%), Gaps = 38/410 (9%)

Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
           +FGD+Q N AM   K  K      NP ++AQ I          N  ++ +  K E+A PG
Sbjct: 35  QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAQKTEIAGPG 81

Query: 183 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
           F+N+ L   +  + ++       + VN    P      +V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82  FINIHLKPEFLAQSVQAANSDAKLAVNEHANPQ-----KVVVDYSSPNLAKEMHVGHLRS 136

Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFY 295
           TIIGD+I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   S  +ADL+ FY
Sbjct: 137 TIIGDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDSVALADLETFY 196

Query: 296 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 354
           +++KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+ 
Sbjct: 197 RDAKKRFDDEEGFADKARNYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQA 256

Query: 355 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 407
               ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y
Sbjct: 257 DIMAESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLY 316

Query: 408 DTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM 467
            T+DLAA   R  +  AD I+   D R      Q +    +K G+    +S        M
Sbjct: 317 ATTDLAACDYRSNKLGADRILIFVDARQNLHFNQ-VELTARKAGLLRDETSYEFCPFGTM 375

Query: 468 ----NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 513
               N P + R      L+D+   ++  A  +L ++ + ++ ++   + +
Sbjct: 376 MGADNKPFKTRTGGTVKLADLLEESINRAAAKLAERESDLSDSDRSEIAR 425



 Score =  216 bits (550), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 183/327 (55%), Gaps = 33/327 (10%)

Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
            +FGD+Q N AM   K  K      NP ++AQ I          N  ++ +  K E+A PG
Sbjct: 35   QFGDYQINAAMGAAKKMK-----SNPRELAQKIID--------NLDVSDIAQKTEIAGPG 81

Query: 1200 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
            F+N+ L   +  + ++       + VN    P      +V+VD+SSPN+AKEMHVGHLRS
Sbjct: 82   FINIHLKPEFLAQSVQAANSDAKLAVNEHANPQ-----KVVVDYSSPNLAKEMHVGHLRS 136

Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFY 1312
            TIIGD+I R LE+ G  VVR NH+GDWGTQFGMLIAHL+D+    +   S  +ADL+ FY
Sbjct: 137  TIIGDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAHLEDQISQGVDLDSVALADLETFY 196

Query: 1313 KESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE- 1371
            +++KKRFD++E F  +A   VV LQ  D   +K W++    S +  +++Y RLNVTLT+ 
Sbjct: 197  RDAKKRFDDEEGFADKARNYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQA 256

Query: 1372 --RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTY 1424
                ES Y   +  ++  L+ K +     G ++++      +D       + KS GGF Y
Sbjct: 257  DIMAESAYNAELNDIISLLKDKNIAVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLY 316

Query: 1425 DTSDLAAIRQRIEEEKADWIVYVTDHR 1451
             T+DLAA   R  +  AD I+   D R
Sbjct: 317  ATTDLAACDYRSNKLGADRILIFVDAR 343


>gi|422643496|ref|ZP_16706635.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
            ES4326]
 gi|330957049|gb|EGH57309.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
            ES4326]
          Length = 578

 Score =  366 bits (939), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 223/563 (39%), Positives = 324/563 (57%), Gaps = 38/563 (6%)

Query: 515  GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
            GDF  N AM L K    K     P D+A+ + + + ++          + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGMK-----PRDLAEKLIAALPAD--------DQVSKVEIAGPGFL 87

Query: 575  NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            N F +      ++   +V+  +         RV+VD S+PN+AKEMHVGHLRSTIIGD +
Sbjct: 88   NFFQNTAALAARLDAALVDTQLSVRKAGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGV 147

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            + +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K+RFD
Sbjct: 148  ANVLEFLGDAVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLEDFYRAAKQRFD 203

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
            E E F +RA   VV LQ  D +    W+   D+S    Q+IY+RLNV LT     GES Y
Sbjct: 204  ESEEFAERARGLVVKLQAGDAECLTLWKRFKDISLSHCQEIYERLNVRLTPADVMGESAY 263

Query: 751  QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 805
             + +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+DLAAI
Sbjct: 264  NEDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAI 323

Query: 806  RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
            R R +  +AD ++Y  D  Q +HF+ + E A++AG ++    +++ +GFG + G D + F
Sbjct: 324  RYRSKVLEADRVLYFVDQRQALHFQQVFEVARRAGFVH-QGMQLEHMGFGTMNGADGRPF 382

Query: 866  KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
            KTR G TVKL +LLDE   R+   +K+KN   E+   EL    +AV    +KYADLS +R
Sbjct: 383  KTRDGGTVKLVDLLDEAEERAYTLVKEKN--PEVAEAELRSIARAVGISAVKYADLSKHR 440

Query: 926  NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
              DY F+FD+ML   GNTA YLLYAYTR+A + R  G   +     A    + LE  +E 
Sbjct: 441  ASDYSFNFDQMLSFEGNTAPYLLYAYTRVAGVFRKLGTPFD-----ADKGHIVLEAPQEQ 495

Query: 986  ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
             LA  L +  + L  V      H LC YLYD++  FS FY+NC  +  ++  + K+    
Sbjct: 496  ELAARLAQFAETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENCPILGAESPDQQKS---- 551

Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
            RL LA  T + +K+  D+L + T
Sbjct: 552  RLRLAALTGRTLKQGLDLLGLET 574



 Score =  215 bits (547), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/329 (39%), Positives = 191/329 (58%), Gaps = 29/329 (8%)

Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
           GDF  N AM L K    K     P D+A+ + + + ++          + K+E+A PGF+
Sbjct: 41  GDFASNIAMMLAKPAGMK-----PRDLAEKLIAALPAD--------DQVSKVEIAGPGFL 87

Query: 185 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           N F +      ++   +V+  +         RV+VD S+PN+AKEMHVGHLRSTIIGD +
Sbjct: 88  NFFQNTAALAARLDAALVDTQLSVRKAGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGV 147

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           + +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K+RFD
Sbjct: 148 ANVLEFLGDAVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLEDFYRAAKQRFD 203

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
           E E F +RA   VV LQ  D +    W+   D+S    Q+IY+RLNV LT     GES Y
Sbjct: 204 ESEEFAERARGLVVKLQAGDAECLTLWKRFKDISLSHCQEIYERLNVRLTPADVMGESAY 263

Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 415
            + +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+DLAAI
Sbjct: 264 NEDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAI 323

Query: 416 RQRIEEEKADWIVYVTDHRS---YHQVLQ 441
           R R +  +AD ++Y  D R    + QV +
Sbjct: 324 RYRSKVLEADRVLYFVDQRQALHFQQVFE 352



 Score =  215 bits (547), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/329 (39%), Positives = 191/329 (58%), Gaps = 29/329 (8%)

Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
            GDF  N AM L K    K     P D+A+ + + + ++          + K+E+A PGF+
Sbjct: 41   GDFASNIAMMLAKPAGMK-----PRDLAEKLIAALPAD--------DQVSKVEIAGPGFL 87

Query: 1202 NVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            N F +      ++   +V+  +         RV+VD S+PN+AKEMHVGHLRSTIIGD +
Sbjct: 88   NFFQNTAALAARLDAALVDTQLSVRKAGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGV 147

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            + +LE+LG  V+R NHVGDWGTQFGML+A+LQ+K P     S  ++DL+ FY+ +K+RFD
Sbjct: 148  ANVLEFLGDAVIRQNHVGDWGTQFGMLLAYLQEK-P---ATSDELSDLEDFYRAAKQRFD 203

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
            E E F +RA   VV LQ  D +    W+   D+S    Q+IY+RLNV LT     GES Y
Sbjct: 204  ESEEFAERARGLVVKLQAGDAECLTLWKRFKDISLSHCQEIYERLNVRLTPADVMGESAY 263

Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAI 1432
             + +  +V  L+  GLL   +G + ++ E     D   +P+ + K+ GG+ Y T+DLAAI
Sbjct: 264  NEDLANVVNDLKATGLLVESNGAQCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAI 323

Query: 1433 RQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
            R R +  +AD ++Y  D R    + QV +
Sbjct: 324  RYRSKVLEADRVLYFVDQRQALHFQQVFE 352


>gi|325265599|ref|ZP_08132290.1| arginine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982947|gb|EGC18568.1| arginine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 567

 Score =  366 bits (939), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 234/554 (42%), Positives = 319/554 (57%), Gaps = 44/554 (7%)

Query: 514  FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
            FGDFQ N AM   K       K+NP ++AQ IA     EL    + A      EVA PGF
Sbjct: 35   FGDFQINGAMGAAKA-----AKQNPRELAQKIAD----ELNGKGAFAVA----EVAGPGF 81

Query: 574  VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 633
            +N+ LS  +   Q++  + +  Q P  +    V++D+SSPN+AKEMHVGHLRS+IIGD++
Sbjct: 82   INLRLSPEFLAAQLEGSL-HIAQTPNPDT---VVIDYSSPNLAKEMHVGHLRSSIIGDSL 137

Query: 634  SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 693
            +R+L +LGH V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 138  ARVLGFLGHKVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 195

Query: 694  EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER----GESF 749
            ED  F   + + VV LQ  D      W    ++S +  +K+Y +L + L ER    GES 
Sbjct: 196  EDAAFADLSREYVVKLQGGDEAVLALWRQFVEISLQHAEKVYAKLGL-LLERGDVAGESK 254

Query: 750  YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
            Y   +  +V  LE KGL+   DG K+++      +D       + K  GGF Y T+DLA 
Sbjct: 255  YNDDLHNVVKELEAKGLVVDSDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDLAC 314

Query: 805  IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
            +R R+   KA+ ++YV D  Q +HF+ L   A+KAG L P     +FVGFG ++G+D K 
Sbjct: 315  LRYRLNMLKANRLLYVVDTRQDLHFKELFVTARKAGWL-PENVSAEFVGFGTMMGKDNKP 373

Query: 865  FKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHN 924
            FKTRSGDTVKL +LLDE + R+   ++ KN   +L+  E ++  Q V  G +KYADLS N
Sbjct: 374  FKTRSGDTVKLVDLLDEAVERATQLVRSKN--PDLSEAEAAKIGQTVGIGAVKYADLSKN 431

Query: 925  RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
            R  DYVF +D ML   GNTA YL YAYTR+ S+ R AG    D  V A      L    E
Sbjct: 432  RTSDYVFDWDNMLSFEGNTAPYLQYAYTRVQSVFRKAG----DWDVQA---AFVLTEPLE 484

Query: 985  FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
              LA  LL+  DVL  V      H+L  YLY ++T FS FY+ C  ++  AEG  +    
Sbjct: 485  QQLAVELLKFEDVLQSVAETNFPHYLAAYLYQLATLFSRFYEACPILK--AEGAARDT-- 540

Query: 1045 GRLLLAEATAKVMK 1058
             RL LA  T + +K
Sbjct: 541  -RLNLARLTGETLK 553



 Score =  209 bits (533), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 143/381 (37%), Positives = 206/381 (54%), Gaps = 32/381 (8%)

Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
           FGDFQ N AM   K       K+NP ++AQ IA     EL    + A      EVA PGF
Sbjct: 35  FGDFQINGAMGAAKA-----AKQNPRELAQKIAD----ELNGKGAFAVA----EVAGPGF 81

Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
           +N+ LS  +   Q++  + +  Q P  +    V++D+SSPN+AKEMHVGHLRS+IIGD++
Sbjct: 82  INLRLSPEFLAAQLEGSL-HIAQTPNPDT---VVIDYSSPNLAKEMHVGHLRSSIIGDSL 137

Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
           +R+L +LGH V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 138 ARVLGFLGHKVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 195

Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER----GESF 359
           ED  F   + + VV LQ  D      W    ++S +  +K+Y +L + L ER    GES 
Sbjct: 196 EDAAFADLSREYVVKLQGGDEAVLALWRQFVEISLQHAEKVYAKLGL-LLERGDVAGESK 254

Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
           Y   +  +V  LE KGL+   DG K+++      +D       + K  GGF Y T+DLA 
Sbjct: 255 YNDDLHNVVKELEAKGLVVDSDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDLAC 314

Query: 415 IRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPV 471
           +R R+   KA+ ++YV D R      +      K   +  + S++  G    M   N P 
Sbjct: 315 LRYRLNMLKANRLLYVVDTRQDLHFKELFVTARKAGWLPENVSAEFVGFGTMMGKDNKPF 374

Query: 472 RDRMSVRDYLSDVFTHAVQVA 492
           + R      L D+   AV+ A
Sbjct: 375 KTRSGDTVKLVDLLDEAVERA 395



 Score =  206 bits (525), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 186/320 (58%), Gaps = 29/320 (9%)

Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
            FGDFQ N AM   K       K+NP ++AQ IA     EL    + A      EVA PGF
Sbjct: 35   FGDFQINGAMGAAKA-----AKQNPRELAQKIAD----ELNGKGAFAVA----EVAGPGF 81

Query: 1201 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 1260
            +N+ LS  +   Q++  + +  Q P  +    V++D+SSPN+AKEMHVGHLRS+IIGD++
Sbjct: 82   INLRLSPEFLAAQLEGSL-HIAQTPNPDT---VVIDYSSPNLAKEMHVGHLRSSIIGDSL 137

Query: 1261 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 1320
            +R+L +LGH V+R NHVGDWGTQFGML+A+L ++  D    +  +ADL+ FY+ +K RFD
Sbjct: 138  ARVLGFLGHKVIRQNHVGDWGTQFGMLVAYLVEQQKD--NAAFELADLEQFYRAAKVRFD 195

Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER----GESF 1376
            ED  F   + + VV LQ  D      W    ++S +  +K+Y +L + L ER    GES 
Sbjct: 196  EDAAFADLSREYVVKLQGGDEAVLALWRQFVEISLQHAEKVYAKLGL-LLERGDVAGESK 254

Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
            Y   +  +V  LE KGL+   DG K+++      +D       + K  GGF Y T+DLA 
Sbjct: 255  YNDDLHNVVKELEAKGLVVDSDGAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDLAC 314

Query: 1432 IRQRIEEEKADWIVYVTDHR 1451
            +R R+   KA+ ++YV D R
Sbjct: 315  LRYRLNMLKANRLLYVVDTR 334


>gi|398889798|ref|ZP_10643577.1| arginyl-tRNA synthetase [Pseudomonas sp. GM55]
 gi|398189246|gb|EJM76529.1| arginyl-tRNA synthetase [Pseudomonas sp. GM55]
          Length = 578

 Score =  365 bits (938), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 236/599 (39%), Positives = 330/599 (55%), Gaps = 52/599 (8%)

Query: 476  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 535  KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 588
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVAKTEIAGPGFLNFFQNTDALAARLDAALADA 107

Query: 589  DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
            +I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  NIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 649  HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 709  LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 765
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 766  LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 821  TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
             D  Q +HF+ +   A+KAG +  +   M+ +GFG + G D + FKTR G TVKL +LL 
Sbjct: 339  VDQRQALHFQQVFAVARKAGFVT-HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLT 397

Query: 881  EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
            E   R+   +KDKN   EL   EL    + V  G +KYADLS +R  DY F+FD ML+  
Sbjct: 398  EAQERAYTLVKDKN--PELAEAELRNIAKVVGIGAVKYADLSKHRTSDYSFNFDLMLNFE 455

Query: 941  GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
            GNTA YLLYAYTR+A + R  G +  ++        + LE   E  LA  L +  ++L  
Sbjct: 456  GNTAPYLLYAYTRVAGVFRKLGKDFSEVE-----GQIVLEAAHEHELAAKLAQFGEILNN 510

Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKK 1059
            V+     H LC YLYD++  FS FY+NC  +  D   ++++    RL LA  T + +K+
Sbjct: 511  VSEKGTPHILCTYLYDVAGLFSSFYENCPILAADTPAQMQS----RLRLAALTGRTLKQ 565



 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 159/446 (35%), Positives = 225/446 (50%), Gaps = 43/446 (9%)

Query: 86  SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
           ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4   TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 198
           K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58  K--PRDLAEKIIAALPAD--------ENVAKTEIAGPGFLNFFQNTDALAARLDAALADA 107

Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
           +I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108 NIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
           HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163 HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 375
           LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219 LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 376 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 430
           +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279 MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 431 TDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNV---PVRDRMSVRDYLSDVFTH 487
            D R      Q  A   K   ++     +  G          P + R      L D+ T 
Sbjct: 339 VDQRQALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTE 398

Query: 488 AVQVAFPELGDKTASVASTNEKYVHK 513
           A + A+  + DK   +A    + + K
Sbjct: 399 AQERAYTLVKDKNPELAEAELRNIAK 424



 Score =  215 bits (547), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 199/364 (54%), Gaps = 40/364 (10%)

Query: 1103 SVRDYLSDVFTHAV-QVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
            ++R  +    T  V +   PE       V ++ +K   K GDF  N AM L K     G 
Sbjct: 4    TIRQLIQQAITQLVNEGVLPEGLSPAIQVENSRDK---KNGDFASNIAMMLAK---PAGM 57

Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVF------LSRVYAGEQIK 1215
            K  P D+A+ I + + ++        + + K E+A PGF+N F       +R+ A     
Sbjct: 58   K--PRDLAEKIIAALPAD--------ENVAKTEIAGPGFLNFFQNTDALAARLDAALADA 107

Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
            +I V    P       R +VD S+PN+AKEMHVGHLRSTIIGD ++R+LE+LG  V+R N
Sbjct: 108  NIGVRKAGPVQ-----RTVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQN 162

Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
            HVGDWGTQFGML+A+LQ+  P     S  ++DL+ FY+ +K+RFDE E F  RA   VV 
Sbjct: 163  HVGDWGTQFGMLMAYLQEN-P---ITSDELSDLENFYRAAKQRFDESEEFADRARGLVVK 218

Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFYQKHMEQLVPYLEKKG 1392
            LQ  D D    W    D+S    QKIY+ LNV LT     GES Y   +  +V  L+  G
Sbjct: 219  LQAGDADCLALWTKFKDISLSHCQKIYELLNVKLTMADVMGESAYNDDLINVVNDLKAAG 278

Query: 1393 LLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 1447
            +L   +G + ++       D   +P+ IVK+DGG+ Y T+DLAA+R R  + KAD  +Y 
Sbjct: 279  MLVESNGAQCVFLDEFKNADGDPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYF 338

Query: 1448 TDHR 1451
             D R
Sbjct: 339  VDQR 342


>gi|296271270|ref|YP_003653902.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296094057|gb|ADG90009.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 575

 Score =  365 bits (938), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 225/610 (36%), Positives = 338/610 (55%), Gaps = 59/610 (9%)

Query: 475  MSVRD---YLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFK 530
            MS+ D    L++    A+  AF PE  ++   + S+      +F D+Q N A++L K  +
Sbjct: 1    MSMTDPQLLLTERVQQALGTAFGPEYAEEDPLIRSS------QFADYQANIALSLAKRLR 54

Query: 531  DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 590
                 + P D+AQ +   +     T           EV+ PGF+N+ LS  +  EQ + +
Sbjct: 55   -----RAPRDVAQDLLGALDQTGITA----------EVSGPGFINITLSDEWIAEQAERL 99

Query: 591  I------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 644
            +      V  V P T      V++D+S+PN AKEMHVGHLR+TI+GDT++R  E+LG+ V
Sbjct: 100  LQDERLGVPKVTPQT------VVIDYSAPNAAKEMHVGHLRTTIVGDTLARTHEHLGNRV 153

Query: 645  VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 704
            +R NH+GDWGT FGMLI HL D   +   +     +  AFY+E++K+FD D  F++R+ +
Sbjct: 154  IRQNHLGDWGTPFGMLIEHLLDVGEEEALRRLAAGEGNAFYQEARKKFDTDPEFEERSRR 213

Query: 705  CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYL 761
             V  LQ  DP+  + W    + ++R F K+Y  L VTLT+    GES Y   +  +   L
Sbjct: 214  RVPLLQGGDPESLRLWGEFIEYTKRYFNKVYAMLGVTLTDEHIAGESMYNPMLADVCDEL 273

Query: 762  EKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 816
            EK G+ ++ DG   ++     G D   +P+ I K DGG+ Y T+DLAAIR RI + KAD 
Sbjct: 274  EKAGIAKISDGALCVFPPGFTGRDGAPLPLIIRKRDGGYGYATTDLAAIRYRIRDLKADR 333

Query: 817  IVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLS 876
            I+YV    Q +HF+++   A+ AG L  +  R + V  G VLG D K F+TRSG++VKL+
Sbjct: 334  ILYVVGATQSLHFQMVFATARMAGWLT-DDIRAEHVQIGSVLGSDGKMFRTRSGESVKLT 392

Query: 877  ELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKM 936
            +LL+E + R+   + D+    E+      +  + V  G +KYADLS + + +YVF FD+M
Sbjct: 393  DLLNEAIVRADAVIADRGYEPEVR----EQIARKVGMGAVKYADLSVSHDSEYVFDFDRM 448

Query: 937  LDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMND 996
            L   GNT  YL YA  RI SI RT  I+       + + P+ L H  E ALA  LL+   
Sbjct: 449  LALTGNTGPYLQYATARIRSIFRTGSIDP-----GSVTGPIRLGHPTERALALQLLKFGS 503

Query: 997  VLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
            V+  V      H LC YL++++ AF+ FY+NC  ++ + E     V   RL L+  T ++
Sbjct: 504  VVQAVADLSEPHRLCGYLFELAQAFTAFYENCPVLKAEDE----EVRRSRLALSALTLRI 559

Query: 1057 MKKCFDILNI 1066
            + +  D+L I
Sbjct: 560  LLQGLDLLGI 569



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/364 (37%), Positives = 203/364 (55%), Gaps = 45/364 (12%)

Query: 85  MSVRD---YLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFK 140
           MS+ D    L++    A+  AF PE  ++   + S+      +F D+Q N A++L K  +
Sbjct: 1   MSMTDPQLLLTERVQQALGTAFGPEYAEEDPLIRSS------QFADYQANIALSLAKRLR 54

Query: 141 DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 200
                + P D+AQ +   +     T           EV+ PGF+N+ LS  +  EQ + +
Sbjct: 55  -----RAPRDVAQDLLGALDQTGITA----------EVSGPGFINITLSDEWIAEQAERL 99

Query: 201 I------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 254
           +      V  V P T      V++D+S+PN AKEMHVGHLR+TI+GDT++R  E+LG+ V
Sbjct: 100 LQDERLGVPKVTPQT------VVIDYSAPNAAKEMHVGHLRTTIVGDTLARTHEHLGNRV 153

Query: 255 VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 314
           +R NH+GDWGT FGMLI HL D   +   +     +  AFY+E++K+FD D  F++R+ +
Sbjct: 154 IRQNHLGDWGTPFGMLIEHLLDVGEEEALRRLAAGEGNAFYQEARKKFDTDPEFEERSRR 213

Query: 315 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYL 371
            V  LQ  DP+  + W    + ++R F K+Y  L VTLT+    GES Y   +  +   L
Sbjct: 214 RVPLLQGGDPESLRLWGEFIEYTKRYFNKVYAMLGVTLTDEHIAGESMYNPMLADVCDEL 273

Query: 372 EKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 426
           EK G+ ++ DG   ++     G D   +P+ I K DGG+ Y T+DLAAIR RI + KAD 
Sbjct: 274 EKAGIAKISDGALCVFPPGFTGRDGAPLPLIIRKRDGGYGYATTDLAAIRYRIRDLKADR 333

Query: 427 IVYV 430
           I+YV
Sbjct: 334 ILYV 337



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/364 (37%), Positives = 203/364 (55%), Gaps = 45/364 (12%)

Query: 1102 MSVRD---YLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFK 1157
            MS+ D    L++    A+  AF PE  ++   + S+      +F D+Q N A++L K  +
Sbjct: 1    MSMTDPQLLLTERVQQALGTAFGPEYAEEDPLIRSS------QFADYQANIALSLAKRLR 54

Query: 1158 DKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 1217
                 + P D+AQ +   +     T           EV+ PGF+N+ LS  +  EQ + +
Sbjct: 55   -----RAPRDVAQDLLGALDQTGITA----------EVSGPGFINITLSDEWIAEQAERL 99

Query: 1218 I------VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 1271
            +      V  V P T      V++D+S+PN AKEMHVGHLR+TI+GDT++R  E+LG+ V
Sbjct: 100  LQDERLGVPKVTPQT------VVIDYSAPNAAKEMHVGHLRTTIVGDTLARTHEHLGNRV 153

Query: 1272 VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 1331
            +R NH+GDWGT FGMLI HL D   +   +     +  AFY+E++K+FD D  F++R+ +
Sbjct: 154  IRQNHLGDWGTPFGMLIEHLLDVGEEEALRRLAAGEGNAFYQEARKKFDTDPEFEERSRR 213

Query: 1332 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYL 1388
             V  LQ  DP+  + W    + ++R F K+Y  L VTLT+    GES Y   +  +   L
Sbjct: 214  RVPLLQGGDPESLRLWGEFIEYTKRYFNKVYAMLGVTLTDEHIAGESMYNPMLADVCDEL 273

Query: 1389 EKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADW 1443
            EK G+ ++ DG   ++     G D   +P+ I K DGG+ Y T+DLAAIR RI + KAD 
Sbjct: 274  EKAGIAKISDGALCVFPPGFTGRDGAPLPLIIRKRDGGYGYATTDLAAIRYRIRDLKADR 333

Query: 1444 IVYV 1447
            I+YV
Sbjct: 334  ILYV 337


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.135    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,056,906,103
Number of Sequences: 23463169
Number of extensions: 936146813
Number of successful extensions: 2788563
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4776
Number of HSP's successfully gapped in prelim test: 583
Number of HSP's that attempted gapping in prelim test: 2729221
Number of HSP's gapped (non-prelim): 21329
length of query: 1458
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1302
effective length of database: 8,698,941,003
effective search space: 11326021185906
effective search space used: 11326021185906
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 84 (37.0 bits)