BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15414
(1458 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VXN4|SYRC_DROME Probable arginine--tRNA ligase, cytoplasmic OS=Drosophila
melanogaster GN=Aats-arg PE=2 SV=1
Length = 665
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/597 (58%), Positives = 458/597 (76%), Gaps = 11/597 (1%)
Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
++ S+ ++L VF A+ AFPE D +A N KFGD+QCN+AM L K K+
Sbjct: 74 KESSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSA-KFGDYQCNNAMGLSKKLKE 132
Query: 532 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
KG K P DIA +EL + + +I+K+E+A GFVNVFLS+ YA + +++
Sbjct: 133 KGINKAPRDIA--------TELKGHCPASPIIEKLEIAGAGFVNVFLSKDYASLALSNLL 184
Query: 592 VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
NGV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+++ RLLE+L HDV+R+NH+G
Sbjct: 185 RNGVKPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLG 243
Query: 652 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
DWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRFDEDE FKKRAY VV+LQ+
Sbjct: 244 DWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQK 303
Query: 712 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
P+ KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ M +V YL KGLLE+D+
Sbjct: 304 GVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQSRMLSVVEYLRGKGLLEVDE 363
Query: 772 GRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
GR+IMW +D + IP+TIVKSDGGFTYDTSD+AAIR R+EEE DWI+YV D GQ HF
Sbjct: 364 GREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFN 423
Query: 831 LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
+ + A+++ ILNP R+D V FGVVLGED KKFKTRSGDTVKLS+LLDEG++RSL +L
Sbjct: 424 TIFKAAERSAILNPLSHRVDHVQFGVVLGEDGKKFKTRSGDTVKLSDLLDEGMKRSLQQL 483
Query: 891 KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
+ + R LTP EL +AQ+++AYGCIKY+DL HNR DY+FSFDKML+DRGNTAVYLLY
Sbjct: 484 ESRGRDKVLTPQELKDAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYT 543
Query: 951 YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
YTRI SIAR +G + +L + T + L+HEKE+ LAKTLL+++D+L+ +++L LH L
Sbjct: 544 YTRICSIARNSGEDFTNLPEILKKTNIVLDHEKEWKLAKTLLKLHDILIKCSKELFLHFL 603
Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
CE+ +++ T F+EFYD+CYCIEK+ +G I V+ R+LL EATA V+++CF IL ++
Sbjct: 604 CEFCFEVCTVFTEFYDSCYCIEKNKQGDIIGVNHSRILLCEATAAVLRQCFYILGLK 660
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/430 (53%), Positives = 308/430 (71%), Gaps = 28/430 (6%)
Query: 7 KLKEFISKVNELSTKGFISESATE---DVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
KL+E K L+ + ++S + D++ Q++N KLK+RL IL+++IAEE
Sbjct: 10 KLRELELKTQGLAARIQTAKSGEQLDVDLVQLQIENKKLKNRLFILKKSIAEE------- 62
Query: 64 SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
+ A ++ P ++ S+ ++L VF A+ AFPE D +A N K
Sbjct: 63 ------STAAGGDVSKP-KESSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSA-K 114
Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
FGD+QCN+AM L K K+KG K P DIA +EL + + +I+K+E+A GF
Sbjct: 115 FGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCPASPIIEKLEIAGAGF 166
Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
VNVFLS+ YA + +++ NGV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+++
Sbjct: 167 VNVFLSKDYASLALSNLLRNGVKPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTIIGESL 225
Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRFD
Sbjct: 226 CRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFD 285
Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
EDE FKKRAY VV+LQ+ P+ KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ
Sbjct: 286 EDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQSR 345
Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
M +V YL KGLLE+D+GR+IMW +D + IP+TIVKSDGGFTYDTSD+AAIR R+EEE
Sbjct: 346 MLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEE 405
Query: 423 KADWIVYVTD 432
DWI+YV D
Sbjct: 406 LCDWIIYVVD 415
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/372 (57%), Positives = 279/372 (75%), Gaps = 12/372 (3%)
Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
+ SI+ ++ A ++ P ++ S+ ++L VF A+ AFPE D +A N
Sbjct: 55 LKKSIAEESTAAGGDVSKP-KESSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSA 113
Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
KFGD+QCN+AM L K K+KG K P DIA +EL + + +I+K+E+A
Sbjct: 114 -KFGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHCPASPIIEKLEIAGA 164
Query: 1199 GFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
GFVNVFLS+ YA + +++ NGV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+
Sbjct: 165 GFVNVFLSKDYASLALSNLLRNGVKPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTIIGE 223
Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 1318
++ RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKR
Sbjct: 224 SLCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKR 283
Query: 1319 FDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQ 1378
FDEDE FKKRAY VV+LQ+ P+ KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ
Sbjct: 284 FDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQ 343
Query: 1379 KHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 1437
M +V YL KGLLE+D+GR+IMW +D + IP+TIVKSDGGFTYDTSD+AAIR R+E
Sbjct: 344 SRMLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLE 403
Query: 1438 EEKADWIVYVTD 1449
EE DWI+YV D
Sbjct: 404 EELCDWIIYVVD 415
>sp|Q6P1S4|SYRC_XENTR Arginine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis GN=rars PE=2
SV=1
Length = 660
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/598 (58%), Positives = 457/598 (76%), Gaps = 15/598 (2%)
Query: 472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
+ +++ + ++F A+ A+PEL + +V + + KFGD+QCN AMA+ ++ K
Sbjct: 71 KSMININAQIQEIFGTAIGAAYPELQNAPLAVTPSQQP---KFGDYQCNSAMAITQMLKA 127
Query: 532 KGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI 590
+K +P +IA I ++ T+EL ++K+++A PGF+NV L + + +QI +
Sbjct: 128 MNQKVSPREIADKIVKNIPTNEL---------VEKVDIAGPGFINVHLHKDFTSKQISKL 178
Query: 591 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
+VNGVQPP + ++ +V+VDFSSPNIAKEMHVGHLRST+IGD+I RL E++GHDV+RLNH+
Sbjct: 179 LVNGVQPPVIWERKKVVVDFSSPNIAKEMHVGHLRSTVIGDSICRLFEFVGHDVLRLNHL 238
Query: 651 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKKRFDEDE FKKRAYQCVV LQ
Sbjct: 239 GDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKKRFDEDEEFKKRAYQCVVQLQ 298
Query: 711 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
P++ +AW +ICDVSR++FQKIYD L++++ +RGESFYQ M +V E+KGL+++D
Sbjct: 299 NKTPNFIQAWNLICDVSRKEFQKIYDCLDISIIDRGESFYQDRMIGVVKEFEEKGLVQVD 358
Query: 771 DGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
+GRK+++ S+P+TIVKSDGGFTYDTSDLAA++QR++EEKAD I+YV D GQ +H +
Sbjct: 359 EGRKVVFPPG-CSVPLTIVKSDGGFTYDTSDLAALKQRLQEEKADMIIYVIDSGQAIHMQ 417
Query: 831 LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
+ + G +P TR++ GFGVVLGED+KKFKTRSGDTV+L +LLDEGL+RS++KL
Sbjct: 418 NVFSAGRMIGWYDPKVTRIEHAGFGVVLGEDKKKFKTRSGDTVRLIDLLDEGLKRSMEKL 477
Query: 891 KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
KDK R LT EL AQ +VA+GCIKYADLSHNR DY+FSFDKMLDDRGNTA YLLYA
Sbjct: 478 KDKGRDKVLTAEELLAAQTSVAFGCIKYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYA 537
Query: 951 YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
YTRI SIAR A I+ EDL AA+ T + LEHEKE+ L+K +LR ++L + DL LH L
Sbjct: 538 YTRIRSIARLANISDEDLHKAAKETEIILEHEKEWKLSKCILRFPEILQKILDDLLLHTL 597
Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
C+YLY+++T F+EFYDNCYC+EKD + G+I V+ RLLL +ATA VM K FDIL I+
Sbjct: 598 CDYLYELATTFTEFYDNCYCVEKDRQTGQIVKVNMSRLLLCDATAAVMAKGFDILGIK 655
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/430 (51%), Positives = 311/430 (72%), Gaps = 36/430 (8%)
Query: 4 KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
+E ++K +++ L GF+SE+ + + L + N KLK+RL IL++++ EE+KK
Sbjct: 15 QETEIKSLAAEIERLKNCGFVSETPSLEGLREE--NAKLKYRLNILRKSLLEEKKK---- 68
Query: 64 SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
++K M +++ + ++F A+ A+PEL + +V + + K
Sbjct: 69 ---------SSKSM-------ININAQIQEIFGTAIGAAYPELQNAPLAVTPSQQP---K 109
Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAKPG 182
FGD+QCN AMA+ ++ K +K +P +IA I ++ T+EL ++K+++A PG
Sbjct: 110 FGDYQCNSAMAITQMLKAMNQKVSPREIADKIVKNIPTNEL---------VEKVDIAGPG 160
Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
F+NV L + + +QI ++VNGVQPP + ++ +V+VDFSSPNIAKEMHVGHLRST+IGD+
Sbjct: 161 FINVHLHKDFTSKQISKLLVNGVQPPVIWERKKVVVDFSSPNIAKEMHVGHLRSTVIGDS 220
Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
I RL E++GHDV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKKRF
Sbjct: 221 ICRLFEFVGHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKKRF 280
Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
DEDE FKKRAYQCVV LQ P++ +AW +ICDVSR++FQKIYD L++++ +RGESFYQ
Sbjct: 281 DEDEEFKKRAYQCVVQLQNKTPNFIQAWNLICDVSRKEFQKIYDCLDISIIDRGESFYQD 340
Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
M +V E+KGL+++D+GRK+++ S+P+TIVKSDGGFTYDTSDLAA++QR++EE
Sbjct: 341 RMIGVVKEFEEKGLVQVDEGRKVVFPPG-CSVPLTIVKSDGGFTYDTSDLAALKQRLQEE 399
Query: 423 KADWIVYVTD 432
KAD I+YV D
Sbjct: 400 KADMIIYVID 409
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/372 (54%), Positives = 279/372 (75%), Gaps = 21/372 (5%)
Query: 1079 ISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 1138
+ S+ + K ++K M +++ + ++F A+ A+PEL + +V + +
Sbjct: 58 LRKSLLEEKKKSSKSM-------ININAQIQEIFGTAIGAAYPELQNAPLAVTPSQQP-- 108
Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA-SVVTSELATNPSLAKVIDKIEVAK 1197
KFGD+QCN AMA+ ++ K +K +P +IA I ++ T+EL ++K+++A
Sbjct: 109 -KFGDYQCNSAMAITQMLKAMNQKVSPREIADKIVKNIPTNEL---------VEKVDIAG 158
Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
PGF+NV L + + +QI ++VNGVQPP + ++ +V+VDFSSPNIAKEMHVGHLRST+IG
Sbjct: 159 PGFINVHLHKDFTSKQISKLLVNGVQPPVIWERKKVVVDFSSPNIAKEMHVGHLRSTVIG 218
Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
D+I RL E++GHDV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ+FYKESKK
Sbjct: 219 DSICRLFEFVGHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKK 278
Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
RFDEDE FKKRAYQCVV LQ P++ +AW +ICDVSR++FQKIYD L++++ +RGESFY
Sbjct: 279 RFDEDEEFKKRAYQCVVQLQNKTPNFIQAWNLICDVSRKEFQKIYDCLDISIIDRGESFY 338
Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIE 1437
Q M +V E+KGL+++D+GRK+++ S+P+TIVKSDGGFTYDTSDLAA++QR++
Sbjct: 339 QDRMIGVVKEFEEKGLVQVDEGRKVVFPPG-CSVPLTIVKSDGGFTYDTSDLAALKQRLQ 397
Query: 1438 EEKADWIVYVTD 1449
EEKAD I+YV D
Sbjct: 398 EEKADMIIYVID 409
>sp|P37880|SYRC_CRIGR Arginine--tRNA ligase, cytoplasmic OS=Cricetulus griseus GN=RARS PE=2
SV=1
Length = 661
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/605 (58%), Positives = 457/605 (75%), Gaps = 13/605 (2%)
Query: 464 AKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAM 523
A+K P ++ +++ L DVF A++ A+P+L + V + + KFGD+QCN AM
Sbjct: 64 AEKRRRPTKNMININSRLQDVFGCAIKAAYPDLDNPPLVVTPSQQP---KFGDYQCNSAM 120
Query: 524 ALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYA 583
+ ++ K K +K NP IA++I T L N + ID++E+A PGF+NV L + +
Sbjct: 121 GISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFV 172
Query: 584 GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 643
EQ+ +++VNG+Q P L + +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+D
Sbjct: 173 SEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYD 232
Query: 644 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 703
V+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY
Sbjct: 233 VLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAY 292
Query: 704 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 763
QCVV+LQ DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ M+ +V E
Sbjct: 293 QCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFED 352
Query: 764 KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
KG +++DDGRKI++ SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA+ I+YV D
Sbjct: 353 KGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVDN 411
Query: 824 GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
GQ VHF+ + A+ G +P T++ VGFGVVLGED+KKFKTRSG+TV+L +LL EGL
Sbjct: 412 GQAVHFQTIFAAAQMIGWYDPKVTQVTHVGFGVVLGEDKKKFKTRSGETVRLVDLLGEGL 471
Query: 884 RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
+RS+DKLK+K R LT EL+ AQ ++AYGCIKYADLSHNR DY+FSFDKMLDDRGNT
Sbjct: 472 KRSMDKLKEKERDKVLTEEELTAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNT 531
Query: 944 AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
A YLLYA+TRI SIAR A ++ E L+ AA+ T + L+HEKE+ L + +LR ++L +
Sbjct: 532 AAYLLYAFTRIRSIARLANVDEEMLQKAARETKIVLDHEKEWKLGRCILRFPEILQKMLD 591
Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFD 1062
DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + GK+ V+ R+LL EA A VM K FD
Sbjct: 592 DLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFD 651
Query: 1063 ILNIR 1067
IL I+
Sbjct: 652 ILGIK 656
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/430 (52%), Positives = 305/430 (70%), Gaps = 33/430 (7%)
Query: 4 KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
+E ++K ++++ L G + +S + D L + N KLK+RL ILQR++ E++++
Sbjct: 15 QEKEIKSLTAEIDRLKNCGHLEDSPSLDQLREE--NLKLKYRLNILQRSLQAEKRRR--- 69
Query: 64 SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
P ++ +++ L DVF A++ A+P+L + V + + K
Sbjct: 70 ----------------PTKNMININSRLQDVFGCAIKAAYPDLDNPPLVVTPSQQP---K 110
Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
FGD+QCN AM + ++ K K +K NP IA++I T L N + ID++E+A PGF
Sbjct: 111 FGDYQCNSAMGISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGF 162
Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
+NV L + + EQ+ +++VNG+Q P L + +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 163 INVHLRKDFVSEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESM 222
Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 223 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFD 282
Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
+E FKKRAYQCVV+LQ DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ
Sbjct: 283 TEEEFKKRAYQCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDR 342
Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
M+ +V E KG +++DDGRKI++ SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEK
Sbjct: 343 MKDIVKEFEDKGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEK 401
Query: 424 ADWIVYVTDH 433
A+ I+YV D+
Sbjct: 402 ANKIIYVVDN 411
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/360 (58%), Positives = 272/360 (75%), Gaps = 12/360 (3%)
Query: 1091 AKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAM 1150
A+K P ++ +++ L DVF A++ A+P+L + V + + KFGD+QCN AM
Sbjct: 64 AEKRRRPTKNMININSRLQDVFGCAIKAAYPDLDNPPLVVTPSQQP---KFGDYQCNSAM 120
Query: 1151 ALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYA 1210
+ ++ K K +K NP IA++I T L N + ID++E+A PGF+NV L + +
Sbjct: 121 GISQMLKAKEQKVNPRGIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFV 172
Query: 1211 GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHD 1270
EQ+ +++VNG+Q P L + +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+D
Sbjct: 173 SEQLTNLLVNGIQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYD 232
Query: 1271 VVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAY 1330
V+RLNHVGDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY
Sbjct: 233 VLRLNHVGDWGTQFGMLIAHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAY 292
Query: 1331 QCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEK 1390
QCVV+LQ DPD+ KAW +ICDVSR +F KIYD L++TL ERGESFYQ M+ +V E
Sbjct: 293 QCVVSLQSKDPDFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFED 352
Query: 1391 KGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
KG +++DDGRKI++ SIP+TIVKSDGGFTYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 353 KGYVQVDDGRKIVFVPG-CSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVDN 411
>sp|P54136|SYRC_HUMAN Arginine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=RARS PE=1 SV=2
Length = 660
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/608 (58%), Positives = 455/608 (74%), Gaps = 13/608 (2%)
Query: 461 KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
K + N P ++ +++ L +VF HA++ A+P+L + V + + KFGD+QCN
Sbjct: 60 KSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCN 116
Query: 521 DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
AM + ++ K K +K NP +IA++I T L N + I+K+E+A PGF+NV L +
Sbjct: 117 SAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRK 168
Query: 581 VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
+ EQ+ ++VNGVQ P L + +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+
Sbjct: 169 DFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228
Query: 641 GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKK
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288
Query: 701 RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
RAYQCVV LQ +PD KAW++ICDVSR++ KIYD L+V+L ERGESFYQ M +V
Sbjct: 289 RAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKE 348
Query: 761 LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
E +G +++DDGRKI++ SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349 FEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407
Query: 821 TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
D GQ VHF+ + A+ G +P TR+ GFGVVLGED+KKFKTRSG+TV+L +LL
Sbjct: 408 VDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLG 467
Query: 881 EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
EGL+RS+DKLK+K R LT EL+ AQ +VAYGCIKYADLSHNR DY+FSFDKMLDDR
Sbjct: 468 EGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR 527
Query: 941 GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
GNTA YLLYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR ++L
Sbjct: 528 GNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQK 587
Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
+ DL LH LC+Y+Y+++TAF+EFYD+CYC+EKD + GKI V+ R+LL EA A VM K
Sbjct: 588 ILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAK 647
Query: 1060 CFDILNIR 1067
FDIL I+
Sbjct: 648 GFDILGIK 655
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/444 (51%), Positives = 307/444 (69%), Gaps = 36/444 (8%)
Query: 4 KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
+E ++K ++++ L G + S + L Q +N KLK+RL IL++++ E K
Sbjct: 15 QEEEIKSLTAEIDRLKNCGCLGASPNLEQL--QEENLKLKYRLNILRKSLQAERNK---- 68
Query: 64 SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
P ++ +++ L +VF HA++ A+P+L + V + + K
Sbjct: 69 ----------------PTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109
Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
FGD+QCN AM + ++ K K +K NP +IA++I T L N + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161
Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
+NV L + + EQ+ ++VNGVQ P L + +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221
Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281
Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
+E FKKRAYQCVV LQ +PD KAW++ICDVSR++ KIYD L+V+L ERGESFYQ
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDR 341
Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
M +V E +G +++DDGRKI++ SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400
Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/361 (58%), Positives = 271/361 (75%), Gaps = 13/361 (3%)
Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
N P ++ +++ L +VF HA++ A+P+L + V + + KFGD+QCN AM + +
Sbjct: 67 NKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123
Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
+ K K +K NP +IA++I T L N + I+K+E+A PGF+NV L + + EQ+
Sbjct: 124 MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINVHLRKDFVSEQL 175
Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
++VNGVQ P L + +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176 TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235
Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236 NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295
Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
LQ +PD KAW++ICDVSR++ KIYD L+V+L ERGESFYQ M +V E +G +
Sbjct: 296 LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFV 355
Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
++DDGRKI++ SIP+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S
Sbjct: 356 QVDDGRKIVFVPG-CSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414
Query: 1454 H 1454
H
Sbjct: 415 H 415
>sp|Q9D0I9|SYRC_MOUSE Arginine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Rars PE=2 SV=2
Length = 660
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/599 (58%), Positives = 451/599 (75%), Gaps = 13/599 (2%)
Query: 470 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
P ++ +++ L +VF A++ A+P+L + V + + KFGD+QCN AM + ++
Sbjct: 69 PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125
Query: 530 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
K K +K +P +IA++I T L N K IDK+E+A PGF+NV L + + EQ+
Sbjct: 126 KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177
Query: 590 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
++VNGVQ P L K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178 LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237
Query: 650 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238 VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297
Query: 710 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
Q +PD KAW +ICDVSR +F+KIYD L++TL ERGESFYQ M+ +V E KG +++
Sbjct: 298 QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357
Query: 770 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
DDGRKI++ S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ +HF
Sbjct: 358 DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHF 416
Query: 830 RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
+ + A+ G +P T + VGFGVVLGED+KKFKTRSG+TV+L +LL+EGL+RS+DK
Sbjct: 417 QTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDK 476
Query: 890 LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
LK+K R LT EL AQ +VAYGCIKYADLSHNR DY+FSFDKMLDDRGNTA YLLY
Sbjct: 477 LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLY 536
Query: 950 AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
A+TRI SIAR A I+ L+ AA+ T + L+HEKE+ L + +LR ++L + DL LH
Sbjct: 537 AFTRIRSIARLANIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596
Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
LC+Y+Y+++T F+EFYD+CYC+EKD + GK+ V+ R+LL EA A VM K FDIL I+
Sbjct: 597 LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 655
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/430 (52%), Positives = 302/430 (70%), Gaps = 34/430 (7%)
Query: 4 KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
+E ++K ++++ L G + S + + L + N KLK+RL IL+R++ EE +K
Sbjct: 15 QEREIKALTAEIDRLKNCGCLEASPSLEQLREE--NLKLKYRLNILRRSLQEERRK---- 68
Query: 64 SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
P ++ +++ L +VF A++ A+P+L + V + + K
Sbjct: 69 ----------------PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---K 109
Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
FGD+QCN AM + ++ K K +K +P +IA++I T L N K IDK+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGF 161
Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
+NV L + + EQ+ ++VNGVQ P L K +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTSLLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221
Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
SRL E+ G+DV+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281
Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
DE FKKRAYQCVV LQ +PD KAW +ICDVSR +F+KIYD L++TL ERGESFYQ
Sbjct: 282 ADEEFKKRAYQCVVLLQSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDR 341
Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
M+ +V E KG +++DDGRKI++ S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400
Query: 424 ADWIVYVTDH 433
A+ I+YV D+
Sbjct: 401 ANKIIYVVDN 410
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/354 (59%), Positives = 268/354 (75%), Gaps = 12/354 (3%)
Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
P ++ +++ L +VF A++ A+P+L + V + + KFGD+QCN AM + ++
Sbjct: 69 PTKNMININSRLQEVFGCAIRAAYPDLENPPLIVTPSQQP---KFGDYQCNSAMGISQML 125
Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
K K +K +P +IA++I T L N K IDK+E+A PGF+NV L + + EQ+
Sbjct: 126 KAKEQKVSPREIAENI----TKHLPNN----KYIDKVEIAGPGFINVHLRKDFVSEQLTS 177
Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
++VNGVQ P L K +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G+DV+RLNH
Sbjct: 178 LLVNGVQLPVLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNH 237
Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD DE FKKRAYQCVV L
Sbjct: 238 VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLL 297
Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
Q +PD KAW +ICDVSR +F+KIYD L++TL ERGESFYQ M+ +V E KG +++
Sbjct: 298 QSKNPDIMKAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357
Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
DDGRKI++ S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358 DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410
>sp|Q5ZM11|SYRC_CHICK Arginine--tRNA ligase, cytoplasmic OS=Gallus gallus GN=RARS PE=2 SV=1
Length = 661
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/599 (58%), Positives = 451/599 (75%), Gaps = 14/599 (2%)
Query: 471 VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF- 529
V+ +++ L ++F A+Q A+PEL + V + + KFGD+QCN AM + +I
Sbjct: 70 VKSMININSRLQEIFGAAIQAAYPELENPPLVVTPSQQP---KFGDYQCNSAMGITQILL 126
Query: 530 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
K K +K +P +IA+ I T + N + I+K+E+A PGF+NV L + + +Q+
Sbjct: 127 KTKEQKVSPREIAEKI----TKHIPAN----ECIEKVEIAGPGFINVHLRKDFVSKQLSS 178
Query: 590 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
++VNGVQPP + K+ +V++DFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 179 LLVNGVQPPAIGKRKKVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 238
Query: 650 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
+GDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESK+RFD +E FKKRAYQCVV L
Sbjct: 239 LGDWGTQFGMLIAHLQDRFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLL 298
Query: 710 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
Q DPD+ KAWE+ICDVSR++FQKIY+ L+VTLTERGESFYQ M+ +V E KG +++
Sbjct: 299 QSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQDMMKDIVKEFEDKGFVQV 358
Query: 770 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
DDGRKI++ S+P+TI+KSDGG+TYDTSDLAA+R R+ EEK D ++YV D GQ VH
Sbjct: 359 DDGRKIVFVPGF-SVPLTIMKSDGGYTYDTSDLAALRHRLLEEKGDILIYVVDSGQSVHL 417
Query: 830 RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
+ + + G +P TR+ FGVVLGED+KKFKTRSGDTV+L +LL+EGL+R++DK
Sbjct: 418 QTVFAAGQMIGWYDPKVTRITHAAFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRAMDK 477
Query: 890 LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
LKDK R LTP EL AQ +VA+GCIKYADLSHNR DYVFSFDKMLDDRGNTA YLLY
Sbjct: 478 LKDKERDKVLTPEELKAAQMSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLY 537
Query: 950 AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
A+TRI +IAR A I+ LR AA+ + L+HEKE+ L K +LR ++L + DL LH
Sbjct: 538 AFTRIRAIARLANIDEGMLRKAAREEVIVLDHEKEWKLGKCILRFPEILQKILDDLLLHT 597
Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
LC+YLY+++T F+EFYDNCYC+EKD + G+I V+T RLLL EATA +M K FDIL I+
Sbjct: 598 LCDYLYELATTFTEFYDNCYCVEKDRQSGQIMKVNTWRLLLCEATATIMAKGFDILGIK 656
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/430 (50%), Positives = 300/430 (69%), Gaps = 35/430 (8%)
Query: 4 KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
+E ++K +++ L G + S + + L + N KLK+RL LQ+++ EE+ K
Sbjct: 15 QENEIKSLTAEIEHLKNFGCLGISPSLEGLRDE--NAKLKYRLNFLQKSLQEEQSKT--- 69
Query: 64 SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
V+ +++ L ++F A+Q A+PEL + V + + K
Sbjct: 70 -----------------VKSMININSRLQEIFGAAIQAAYPELENPPLVVTPSQQP---K 109
Query: 124 FGDFQCNDAMALCKIF-KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
FGD+QCN AM + +I K K +K +P +IA+ I T + N + I+K+E+A PG
Sbjct: 110 FGDYQCNSAMGITQILLKTKEQKVSPREIAEKI----TKHIPAN----ECIEKVEIAGPG 161
Query: 183 FVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
F+NV L + + +Q+ ++VNGVQPP + K+ +V++DFSSPNIAKEMHVGHLRSTIIG++
Sbjct: 162 FINVHLRKDFVSKQLSSLLVNGVQPPAIGKRKKVILDFSSPNIAKEMHVGHLRSTIIGES 221
Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRF 302
+ RL E+ G+DV+RLNH+GDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESK+RF
Sbjct: 222 MCRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDRFPDYLTVSPPIGDLQAFYKESKRRF 281
Query: 303 DEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQK 362
D +E FKKRAYQCVV LQ DPD+ KAWE+ICDVSR++FQKIY+ L+VTLTERGESFYQ
Sbjct: 282 DTEEEFKKRAYQCVVLLQSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQD 341
Query: 363 HMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
M+ +V E KG +++DDGRKI++ S+P+TI+KSDGG+TYDTSDLAA+R R+ EE
Sbjct: 342 MMKDIVKEFEDKGFVQVDDGRKIVFVPGF-SVPLTIMKSDGGYTYDTSDLAALRHRLLEE 400
Query: 423 KADWIVYVTD 432
K D ++YV D
Sbjct: 401 KGDILIYVVD 410
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/353 (57%), Positives = 268/353 (75%), Gaps = 13/353 (3%)
Query: 1098 VRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF- 1156
V+ +++ L ++F A+Q A+PEL + V + + KFGD+QCN AM + +I
Sbjct: 70 VKSMININSRLQEIFGAAIQAAYPELENPPLVVTPSQQP---KFGDYQCNSAMGITQILL 126
Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
K K +K +P +IA+ I T + N + I+K+E+A PGF+NV L + + +Q+
Sbjct: 127 KTKEQKVSPREIAEKI----TKHIPAN----ECIEKVEIAGPGFINVHLRKDFVSKQLSS 178
Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
++VNGVQPP + K+ +V++DFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G+DV+RLNH
Sbjct: 179 LLVNGVQPPAIGKRKKVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNH 238
Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
+GDWGTQFGMLIAHLQD+FPDYLT SPPI DLQAFYKESK+RFD +E FKKRAYQCVV L
Sbjct: 239 LGDWGTQFGMLIAHLQDRFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLL 298
Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
Q DPD+ KAWE+ICDVSR++FQKIY+ L+VTLTERGESFYQ M+ +V E KG +++
Sbjct: 299 QSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQDMMKDIVKEFEDKGFVQV 358
Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
DDGRKI++ S+P+TI+KSDGG+TYDTSDLAA+R R+ EEK D ++YV D
Sbjct: 359 DDGRKIVFVPGF-SVPLTIMKSDGGYTYDTSDLAALRHRLLEEKGDILIYVVD 410
>sp|Q5RA20|SYRC_PONAB Arginine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=RARS PE=2 SV=1
Length = 660
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/601 (58%), Positives = 452/601 (75%), Gaps = 13/601 (2%)
Query: 468 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 527
N P ++ ++V L +VF HA++ A+P+L + V + + KFGD+QCN AM + +
Sbjct: 67 NKPTKNMINVISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123
Query: 528 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 587
+ K K +K NP +IA++I T L N + I+K+E+A PGF+N+ L + + EQ+
Sbjct: 124 MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINIHLRKDFVSEQL 175
Query: 588 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 647
++VNGVQ P L + +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176 TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235
Query: 648 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 707
NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236 NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295
Query: 708 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 767
LQ +PD KAW++ICDVSR++ KIYD L+V+L ERGESFYQ M +V E +G +
Sbjct: 296 LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDMMNDIVKEFEDRGFV 355
Query: 768 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGV 827
++DDGRKI++ SIP+TI+KSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D GQ V
Sbjct: 356 QVDDGRKIVFVPG-CSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414
Query: 828 HFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSL 887
HF+ + A+ G +P TR+ GFGVVLGED+KKFKTRSG+TV+L +LL EGL+RS+
Sbjct: 415 HFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSM 474
Query: 888 DKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYL 947
DKLK+K R LT EL+ AQ ++AYGC+KYADLSHNR DY+FSFDKMLDD+GNTA YL
Sbjct: 475 DKLKEKERDKVLTAEELNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKMLDDKGNTAAYL 534
Query: 948 LYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCL 1007
LYA+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR ++L + DL L
Sbjct: 535 LYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 594
Query: 1008 HHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
H LC+Y+Y+++T F+EFYD+CYC+EKD + GKI V+ R+LL EA A VM K FDIL I
Sbjct: 595 HTLCDYIYELATTFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGI 654
Query: 1067 R 1067
+
Sbjct: 655 K 655
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/444 (51%), Positives = 308/444 (69%), Gaps = 36/444 (8%)
Query: 4 KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
+E ++K ++++ L G + SA + L Q +N KLK+RL ILQ+++ E K
Sbjct: 15 QEEEIKSLTAEIDRLKNCGCLGASANLEQL--QEENLKLKYRLNILQKSLQAERNK---- 68
Query: 64 SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
P ++ ++V L +VF HA++ A+P+L + V + + K
Sbjct: 69 ----------------PTKNMINVISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---K 109
Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
FGD+QCN AM + ++ K K +K NP +IA++I T L N + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGF 161
Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
+N+ L + + EQ+ ++VNGVQ P L + +V+VDFSSPNIAKEMHVGHLRSTIIG++I
Sbjct: 162 INIHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221
Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
SRL E+ G+DV+RLNH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD
Sbjct: 222 SRLFEFAGYDVLRLNHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFD 281
Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
+E FKKRAYQCVV LQ +PD KAW++ICDVSR++ KIYD L+V+L ERGESFYQ
Sbjct: 282 TEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDM 341
Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
M +V E +G +++DDGRKI++ SIP+TI+KSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MNDIVKEFEDRGFVQVDDGRKIVFVPG-CSIPLTILKSDGGYTYDTSDLAAIKQRLFEEK 400
Query: 424 ADWIVYVTDH-RSYH-QVLQAIAE 445
AD I+YV D+ +S H Q + A A+
Sbjct: 401 ADMIIYVVDNGQSVHFQTIFAAAQ 424
Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/361 (57%), Positives = 271/361 (75%), Gaps = 13/361 (3%)
Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
N P ++ ++V L +VF HA++ A+P+L + V + + KFGD+QCN AM + +
Sbjct: 67 NKPTKNMINVISRLQEVFGHAIKAAYPDLENPPLLVTPSQQA---KFGDYQCNSAMGISQ 123
Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
+ K K +K NP +IA++I T L N + I+K+E+A PGF+N+ L + + EQ+
Sbjct: 124 MLKTKEQKVNPREIAENI----TKHLPDN----ECIEKVEIAGPGFINIHLRKDFVSEQL 175
Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
++VNGVQ P L + +V+VDFSSPNIAKEMHVGHLRSTIIG++ISRL E+ G+DV+RL
Sbjct: 176 TSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRL 235
Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
NH+GDWGTQFGMLIAHLQDKFPDYLT SPPI DLQ FYKESKKRFD +E FKKRAYQCVV
Sbjct: 236 NHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVV 295
Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
LQ +PD KAW++ICDVSR++ KIYD L+V+L ERGESFYQ M +V E +G +
Sbjct: 296 LLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDMMNDIVKEFEDRGFV 355
Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
++DDGRKI++ SIP+TI+KSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S
Sbjct: 356 QVDDGRKIVFVPG-CSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 414
Query: 1454 H 1454
H
Sbjct: 415 H 415
>sp|P40329|SYRC_RAT Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Rars PE=1
SV=2
Length = 660
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/599 (58%), Positives = 452/599 (75%), Gaps = 13/599 (2%)
Query: 470 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 529
P ++ +++ L ++F A++ A+P+L + V + + KFGD+QCN AM + ++
Sbjct: 69 PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQML 125
Query: 530 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
K K +K +P +IA++I T L N + ID++E+A PGF+NV L + + EQ+ +
Sbjct: 126 KAKEQKVSPREIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFVSEQLTN 177
Query: 590 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
++VNGVQ P L + +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G++V+RLNH
Sbjct: 178 LLVNGVQLPVLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNH 237
Query: 650 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY+CVV L
Sbjct: 238 VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYECVVLL 297
Query: 710 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
Q +PD KAW +ICDVSR +F KIYD L++TL ERGESFYQ M+ +V E KG +++
Sbjct: 298 QSKNPDIMKAWNLICDVSREEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357
Query: 770 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
DDGRKI++ S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D GQ HF
Sbjct: 358 DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQATHF 416
Query: 830 RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
+ + A+ G +P TR+ VGFGVVLGED+KKFKTRSG+TV+L +LL+EGLRRS+DK
Sbjct: 417 QTVFAAAQMIGWYDPKVTRVAHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLRRSMDK 476
Query: 890 LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
LK+K R LT EL AQ +VAYGCIKYADLSHNR DYVFSFDKMLDDRGNTA YLLY
Sbjct: 477 LKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLY 536
Query: 950 AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
A+TRI SIAR A I+ E L+ AA+ T + L+HEKE+ L + +LR ++L + DL LH
Sbjct: 537 AFTRIRSIARLANIDEEMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHT 596
Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
LC+Y+Y+++T F+EFYD+CYC+EKD + GK+ V+ R+LL EA A VM K FDIL I+
Sbjct: 597 LCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIK 655
Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/430 (50%), Positives = 301/430 (70%), Gaps = 34/430 (7%)
Query: 4 KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
+E ++K ++++ L ++ S + + L + N KLK+RL IL+R++ E K+
Sbjct: 15 QEKEIKSLTAEIDRLKNCSYLEASPSLEQLREE--NLKLKYRLNILRRSLQAERKR---- 68
Query: 64 SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
P ++ +++ L ++F A++ A+P+L + V + + K
Sbjct: 69 ----------------PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTPSQQP---K 109
Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
FGD+QCN AM + ++ K K +K +P +IA++I T L N + ID++E+A PGF
Sbjct: 110 FGDYQCNSAMGISQMLKAKEQKVSPREIAENI----TKHLPNN----EYIDRVEIAGPGF 161
Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
+NV L + + EQ+ +++VNGVQ P L + +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INVHLRKDFVSEQLTNLLVNGVQLPVLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221
Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
SRL E+ G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 SRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281
Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
+E FKKRAY+CVV LQ +PD KAW +ICDVSR +F KIYD L++TL ERGESFYQ
Sbjct: 282 TEEEFKKRAYECVVLLQSKNPDIMKAWNLICDVSREEFNKIYDALDITLIERGESFYQDR 341
Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
M+ +V E KG +++DDGRKI++ S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MKDIVKEFEDKGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400
Query: 424 ADWIVYVTDH 433
A+ I+YV D+
Sbjct: 401 ANKIIYVVDN 410
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/354 (57%), Positives = 268/354 (75%), Gaps = 12/354 (3%)
Query: 1097 PVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIF 1156
P ++ +++ L ++F A++ A+P+L + V + + KFGD+QCN AM + ++
Sbjct: 69 PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTPSQQP---KFGDYQCNSAMGISQML 125
Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
K K +K +P +IA++I T L N + ID++E+A PGF+NV L + + EQ+ +
Sbjct: 126 KAKEQKVSPREIAENI----TKHLPNN----EYIDRVEIAGPGFINVHLRKDFVSEQLTN 177
Query: 1217 IIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
++VNGVQ P L + +V+VDFSSPNIAKEMHVGHLRSTIIG+++SRL E+ G++V+RLNH
Sbjct: 178 LLVNGVQLPVLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNH 237
Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
VGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAY+CVV L
Sbjct: 238 VGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYECVVLL 297
Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
Q +PD KAW +ICDVSR +F KIYD L++TL ERGESFYQ M+ +V E KG +++
Sbjct: 298 QSKNPDIMKAWNLICDVSREEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQV 357
Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
DDGRKI++ S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKA+ I+YV D+
Sbjct: 358 DDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDN 410
>sp|A7YW98|SYRC_BOVIN Arginine--tRNA ligase, cytoplasmic OS=Bos taurus GN=RARS PE=2 SV=1
Length = 660
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/608 (56%), Positives = 453/608 (74%), Gaps = 13/608 (2%)
Query: 461 KGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCN 520
K + N P + +++ L +VF A++ A+P L + V + + KFGD+QCN
Sbjct: 60 KSLQAERNKPTKTMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---KFGDYQCN 116
Query: 521 DAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSR 580
AM +C++ K K +K NP +IA++I L N + I+K+E+A PGF+N+ L +
Sbjct: 117 SAMGICQMLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGFINIHLRK 168
Query: 581 VYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYL 640
+ +Q+ +++VNGV+ P++ + +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+
Sbjct: 169 GFVSQQLTNLLVNGVKIPSIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228
Query: 641 GHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKK 700
G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKK
Sbjct: 229 GYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288
Query: 701 RAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPY 760
RAYQCVV LQ +PD KAW++ICDVSR++F KIY+ L+++L ERGESFYQ M +V
Sbjct: 289 RAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDRMHDIVKE 348
Query: 761 LEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYV 820
E +G +++DDGRKI++ S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV
Sbjct: 349 FEDRGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407
Query: 821 TDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLD 880
D GQ +HF+ + A+ G +P TR+ GFGVVLGED+KKFKTRSG+TV+L +LL+
Sbjct: 408 VDNGQSLHFQTVFGAAQMIGWYDPAVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLE 467
Query: 881 EGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
EGL+RS+DKLK+K R LT EL AQ +VAYGCIKYADLSHNR DY+FSFDKMLDDR
Sbjct: 468 EGLKRSMDKLKEKERDKVLTTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR 527
Query: 941 GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
GNTA YLLYA+TRI SIAR A I+ E LR AA T + L+HEKE+ L + +LR +VL
Sbjct: 528 GNTAAYLLYAFTRIRSIARLANIDEEMLRKAAHETEIILDHEKEWKLGRCILRFPEVLQK 587
Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKK 1059
+ DL LH LC+Y+Y+++T F+EFYD+CYC+EKD + G++ V+ R+LL EA A VM K
Sbjct: 588 ILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQSGEVLKVNMWRMLLCEAVAAVMAK 647
Query: 1060 CFDILNIR 1067
FDIL I+
Sbjct: 648 GFDILGIK 655
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/435 (49%), Positives = 303/435 (69%), Gaps = 35/435 (8%)
Query: 4 KELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGIS 63
+E ++K ++V+ L K + A+ D+ + +N KLK+RL IL++++ E K
Sbjct: 15 QEKEIKFLTAEVDRL--KNYSCSEASADLEKLREENLKLKYRLNILRKSLQAERNK---- 68
Query: 64 SSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHK 123
P + +++ L +VF A++ A+P L + V + + K
Sbjct: 69 ----------------PTKTMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---K 109
Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
FGD+QCN AM +C++ K K +K NP +IA++I L N + I+K+E+A PGF
Sbjct: 110 FGDYQCNSAMGICQMLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGF 161
Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTI 243
+N+ L + + +Q+ +++VNGV+ P++ + +V+VDFSSPNIAKEMHVGHLRSTIIG+++
Sbjct: 162 INIHLRKGFVSQQLTNLLVNGVKIPSIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESM 221
Query: 244 SRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFD 303
RL E+ G++V+RLNHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD
Sbjct: 222 CRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFD 281
Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH 363
+E FKKRAYQCVV LQ +PD KAW++ICDVSR++F KIY+ L+++L ERGESFYQ
Sbjct: 282 TEEEFKKRAYQCVVLLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDR 341
Query: 364 MEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK 423
M +V E +G +++DDGRKI++ S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEK
Sbjct: 342 MHDIVKEFEDRGFVQVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEK 400
Query: 424 ADWIVYVTDH-RSYH 437
AD I+YV D+ +S H
Sbjct: 401 ADMIIYVVDNGQSLH 415
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/361 (55%), Positives = 271/361 (75%), Gaps = 13/361 (3%)
Query: 1095 NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCK 1154
N P + +++ L +VF A++ A+P L + V + + KFGD+QCN AM +C+
Sbjct: 67 NKPTKTMININSCLEEVFGCAIKAAYPVLENPPLIVTPSQQP---KFGDYQCNSAMGICQ 123
Query: 1155 IFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 1214
+ K K +K NP +IA++I L N + I+K+E+A PGF+N+ L + + +Q+
Sbjct: 124 MLKTKEQKVNPREIAENI----VKHLPDN----EYIEKVEIAGPGFINIHLRKGFVSQQL 175
Query: 1215 KDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRL 1274
+++VNGV+ P++ + +V+VDFSSPNIAKEMHVGHLRSTIIG+++ RL E+ G++V+RL
Sbjct: 176 TNLLVNGVKIPSIGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYNVLRL 235
Query: 1275 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVV 1334
NHVGDWGTQFGMLIAHLQDKFPDYLT SPPI DLQAFYKESKKRFD +E FKKRAYQCVV
Sbjct: 236 NHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVV 295
Query: 1335 ALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLL 1394
LQ +PD KAW++ICDVSR++F KIY+ L+++L ERGESFYQ M +V E +G +
Sbjct: 296 LLQSKNPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDRMHDIVKEFEDRGFV 355
Query: 1395 ELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSY 1453
++DDGRKI++ S+P+TIVKSDGG+TYDTSDLAAI+QR+ EEKAD I+YV D+ +S
Sbjct: 356 QVDDGRKIVFVPG-CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSL 414
Query: 1454 H 1454
H
Sbjct: 415 H 415
>sp|Q19825|SYRC_CAEEL Probable arginine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=rrt-1 PE=2 SV=2
Length = 713
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/633 (50%), Positives = 419/633 (66%), Gaps = 33/633 (5%)
Query: 447 EKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDK 499
EKK + AKK+ D ++V DY L +F A++ AFP L D
Sbjct: 97 EKKAKKDGKTGGAPPKQAKKV-----DYVTVEDYGSSIFGRLQSLFKKAIEDAFPGL-DV 150
Query: 500 TASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSL 559
+A T +FGD+QCN AM + K K P D+A+ I A P+
Sbjct: 151 PLLLAETPNP---QFGDYQCNSAMPIAAKLKANKINKRPGDVAKEIQ-------AKLPTK 200
Query: 560 AKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEM 619
++KI+V GF+N+FL+ Y QI + GV+ P L +K RVLVDFSSPNIAKEM
Sbjct: 201 IDFVEKIDVMPAGFINIFLNTDYLRRQISLLASEGVKLPKLTRK-RVLVDFSSPNIAKEM 259
Query: 620 HVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 679
HVGHLRSTIIGD+I RL E +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+
Sbjct: 260 HVGHLRSTIIGDSICRLFEAVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDIS 319
Query: 680 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
DLQAFYKESKKRFDEDE FKKRAY+ VV LQ D D KAW ICDVS++ Q +Y+ L+
Sbjct: 320 DLQAFYKESKKRFDEDEQFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLD 379
Query: 740 VTLTERGESFYQKHMEQLVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGF 795
+ + + GESFYQ M +LV +++ K +L +DGR+IM+ G D IP+T+VKSDGGF
Sbjct: 380 IKIKDVGESFYQDKMIELVKWVKTNKPDMLREEDGRQIMFPTGCD---IPLTVVKSDGGF 436
Query: 796 TYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFG 855
TYDTSDLAA++ R+ EEK DW +YV D GQ +H + + G + + R++ V FG
Sbjct: 437 TYDTSDLAALKYRMLEEKCDWNIYVVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFG 496
Query: 856 VVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGC 915
+VLG+D+KKFKTRSG+TV+L +LL EG++R+ +KL +K R T ++ +L A+ AVA+GC
Sbjct: 497 LVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGC 556
Query: 916 IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
+KYADLSH R DYVFSFD+ML+DRGNTAVYLLYAYTRI SI + + DL ST
Sbjct: 557 VKYADLSHTRTQDYVFSFDRMLEDRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIAST 616
Query: 976 P-VSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKD 1034
P + L+H EF LAK LL+++D ++LV L LH +C+Y+Y ++T F +FY+ CY IE +
Sbjct: 617 PTLPLDHPGEFKLAKQLLKLSDCVLLVLDSLMLHQMCDYVYQLATLFHDFYNECYVIE-N 675
Query: 1035 AEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
EG+ VH RL L + T KVM CF IL +R
Sbjct: 676 KEGEKPFVHMHRLALCDVTRKVMSTCFKILGLR 708
Score = 363 bits (933), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 229/517 (44%), Positives = 307/517 (59%), Gaps = 60/517 (11%)
Query: 35 AQLQNTKLKHRLAILQRAIAEE---EKKQGISSSIS------------------SQTKGA 73
A+ N KLK+R +IL+++IAE+ KK G+ ++ + +T GA
Sbjct: 50 AKKLNDKLKYRKSILEKSIAEQAAKNKKNGVKATSTSSPSSSTSAPAEKKAKKDGKTGGA 109
Query: 74 AKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGD 126
K V D ++V DY L +F A++ AFP L D +A T +FGD
Sbjct: 110 PPKQAKKV-DYVTVEDYGSSIFGRLQSLFKKAIEDAFPGL-DVPLLLAETPNP---QFGD 164
Query: 127 FQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV 186
+QCN AM + K K P D+A+ I A P+ ++KI+V GF+N+
Sbjct: 165 YQCNSAMPIAAKLKANKINKRPGDVAKEIQ-------AKLPTKIDFVEKIDVMPAGFINI 217
Query: 187 FLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 246
FL+ Y QI + GV+ P L +K RVLVDFSSPNIAKEMHVGHLRSTIIGD+I RL
Sbjct: 218 FLNTDYLRRQISLLASEGVKLPKLTRK-RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRL 276
Query: 247 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDE 306
E +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKKRFDEDE
Sbjct: 277 FEAVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDISDLQAFYKESKKRFDEDE 336
Query: 307 IFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQ 366
FKKRAY+ VV LQ D D KAW ICDVS++ Q +Y+ L++ + + GESFYQ M +
Sbjct: 337 QFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFYQDKMIE 396
Query: 367 LVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEE 422
LV +++ K +L +DGR+IM+ G D IP+T+VKSDGGFTYDTSDLAA++ R+ EE
Sbjct: 397 LVKWVKTNKPDMLREEDGRQIMFPTGCD---IPLTVVKSDGGFTYDTSDLAALKYRMLEE 453
Query: 423 KADWIVYVTDH-RSYHQVLQAIAEEEKKQGISSSSSSQTKGTA-------KKMNVPVRDR 474
K DW +YV D +S H L+ + + G S + + A K R
Sbjct: 454 KCDWNIYVVDSGQSLH--LETVYAAGRDFGWYDESIQRVEHVAFGLVLGDDKKKFKTRSG 511
Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYV 511
+VR L D+ + V+ A +L +K A + E+ V
Sbjct: 512 ETVR--LLDLLSEGVKRATEKLIEKGRETAMSEEQLV 546
Score = 353 bits (905), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 196/376 (52%), Positives = 249/376 (66%), Gaps = 27/376 (7%)
Query: 1085 SQTKGAAKKMNVPVRDRMSVRDY-------LSDVFTHAVQVAFPELGDKTASVASTNEKY 1137
+T GA K V D ++V DY L +F A++ AFP L D +A T
Sbjct: 104 GKTGGAPPKQAKKV-DYVTVEDYGSSIFGRLQSLFKKAIEDAFPGL-DVPLLLAETPNP- 160
Query: 1138 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 1197
+FGD+QCN AM + K K P D+A+ I A P+ ++KI+V
Sbjct: 161 --QFGDYQCNSAMPIAAKLKANKINKRPGDVAKEIQ-------AKLPTKIDFVEKIDVMP 211
Query: 1198 PGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG 1257
GF+N+FL+ Y QI + GV+ P L +K RVLVDFSSPNIAKEMHVGHLRSTIIG
Sbjct: 212 AGFINIFLNTDYLRRQISLLASEGVKLPKLTRK-RVLVDFSSPNIAKEMHVGHLRSTIIG 270
Query: 1258 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKK 1317
D+I RL E +G DV+R+NH+GDWGTQFGMLIAHL D+FPD+L K P I+DLQAFYKESKK
Sbjct: 271 DSICRLFEAVGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDISDLQAFYKESKK 330
Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
RFDEDE FKKRAY+ VV LQ D D KAW ICDVS++ Q +Y+ L++ + + GESFY
Sbjct: 331 RFDEDEQFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFY 390
Query: 1378 QKHMEQLVPYLE--KKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGGFTYDTSDLAAIR 1433
Q M +LV +++ K +L +DGR+IM+ G D IP+T+VKSDGGFTYDTSDLAA++
Sbjct: 391 QDKMIELVKWVKTNKPDMLREEDGRQIMFPTGCD---IPLTVVKSDGGFTYDTSDLAALK 447
Query: 1434 QRIEEEKADWIVYVTD 1449
R+ EEK DW +YV D
Sbjct: 448 YRMLEEKCDWNIYVVD 463
>sp|B1XPX8|SYR_SYNP2 Arginine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27264 / PCC
7002 / PR-6) GN=argS PE=3 SV=1
Length = 585
Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust.
Identities = 269/567 (47%), Positives = 371/567 (65%), Gaps = 38/567 (6%)
Query: 513 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 571
KFGD+Q N A++L KI K KNP +IAQSI + ++ NP+ +A P
Sbjct: 38 KFGDYQSNVALSLTKILK-----KNPREIAQSIIEALDIADTCENPT---------IAGP 83
Query: 572 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
GF+N L Y +K++ + ++P +K V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84 GFINFSLKPSYLATLLKEVQQSDRLAIEPAENPQK--VIVDFSSPNIAKEMHVGHLRSTI 141
Query: 629 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 686
IGD+I+R+LE+ G DV+RLNHVGDWGTQFGMLI +L++ +PD LTK+ I DL AFYK
Sbjct: 142 IGDSIARILEFRGQDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADALDIGDLVAFYK 201
Query: 687 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 746
++K RFDEDE FK+ + VV LQ D + +KAW+++C+ SRR+FQKIYD L++ LTERG
Sbjct: 202 KAKVRFDEDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIYDILDIKLTERG 261
Query: 747 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
ESFY ++ ++ L++ GLLE D G + ++ E D +P+ + KSDGGF Y T+D
Sbjct: 262 ESFYNPYLADVLTALDEVGLLEEDAGAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTD 321
Query: 802 LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
LAAIR RI+E++A I+YVTD GQ HF + + A++AG L P+ + V FG+V GED
Sbjct: 322 LAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQVAERAGFL-PDDVEVVHVPFGLVQGED 380
Query: 862 RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYA 919
KK KTR+GDT+KL +LLDE + RS L+ + E T + + Q V G +KYA
Sbjct: 381 GKKLKTRAGDTIKLKDLLDEAVNRSRADLEKRLAEDERQETADFIEKVSQVVGIGAVKYA 440
Query: 920 DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
DLS NR +Y+FSFDKML +GNTA Y+LYAY R+ ++R GI DL TP+ L
Sbjct: 441 DLSQNRTSNYIFSFDKMLALQGNTAPYMLYAYVRVQGVSRQGGI---DLSTLPTDTPIIL 497
Query: 980 EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
E E LAK LL++++VLM V +DL + LCEYLYD+S F++FY+ C ++ + + +I
Sbjct: 498 EEAAELTLAKHLLQLSEVLMSVEQDLMPNRLCEYLYDLSRKFNQFYEACPILKAEGDRRI 557
Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNI 1066
RL+LA+ TA+ +K +L I
Sbjct: 558 -----SRLILADTTARTLKLGLSLLGI 579
Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/333 (49%), Positives = 224/333 (67%), Gaps = 30/333 (9%)
Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 181
KFGD+Q N A++L KI K KNP +IAQSI + ++ NP+ +A P
Sbjct: 38 KFGDYQSNVALSLTKILK-----KNPREIAQSIIEALDIADTCENPT---------IAGP 83
Query: 182 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
GF+N L Y +K++ + ++P +K V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84 GFINFSLKPSYLATLLKEVQQSDRLAIEPAENPQK--VIVDFSSPNIAKEMHVGHLRSTI 141
Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 296
IGD+I+R+LE+ G DV+RLNHVGDWGTQFGMLI +L++ +PD LTK+ I DL AFYK
Sbjct: 142 IGDSIARILEFRGQDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADALDIGDLVAFYK 201
Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 356
++K RFDEDE FK+ + VV LQ D + +KAW+++C+ SRR+FQKIYD L++ LTERG
Sbjct: 202 KAKVRFDEDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIYDILDIKLTERG 261
Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
ESFY ++ ++ L++ GLLE D G + ++ E D +P+ + KSDGGF Y T+D
Sbjct: 262 ESFYNPYLADVLTALDEVGLLEEDAGAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTD 321
Query: 412 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 441
LAAIR RI+E++A I+YVTD + QV Q
Sbjct: 322 LAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQ 354
Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/333 (49%), Positives = 224/333 (67%), Gaps = 30/333 (9%)
Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 1198
KFGD+Q N A++L KI K KNP +IAQSI + ++ NP+ +A P
Sbjct: 38 KFGDYQSNVALSLTKILK-----KNPREIAQSIIEALDIADTCENPT---------IAGP 83
Query: 1199 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
GF+N L Y +K++ + ++P +K V+VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84 GFINFSLKPSYLATLLKEVQQSDRLAIEPAENPQK--VIVDFSSPNIAKEMHVGHLRSTI 141
Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 1313
IGD+I+R+LE+ G DV+RLNHVGDWGTQFGMLI +L++ +PD LTK+ I DL AFYK
Sbjct: 142 IGDSIARILEFRGQDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADALDIGDLVAFYK 201
Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
++K RFDEDE FK+ + VV LQ D + +KAW+++C+ SRR+FQKIYD L++ LTERG
Sbjct: 202 KAKVRFDEDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIYDILDIKLTERG 261
Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
ESFY ++ ++ L++ GLLE D G + ++ E D +P+ + KSDGGF Y T+D
Sbjct: 262 ESFYNPYLADVLTALDEVGLLEEDAGAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTD 321
Query: 1429 LAAIRQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
LAAIR RI+E++A I+YVTD + QV Q
Sbjct: 322 LAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQ 354
>sp|B0JLI8|SYR_MICAN Arginine--tRNA ligase OS=Microcystis aeruginosa (strain NIES-843)
GN=argS PE=3 SV=1
Length = 585
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/574 (45%), Positives = 375/574 (65%), Gaps = 36/574 (6%)
Query: 503 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 562
VA++N + FGD+QCN +++L K K K P ++A + L N + +
Sbjct: 32 VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74
Query: 563 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 621
E+A PGF+N+ L Y Q+KD+I N + T N +++VDFSSPNIAKEMHV
Sbjct: 75 CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134
Query: 622 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 679
GHLRSTIIGD I+R+LE+ H V+RLNHVGDWGTQFGMLI +LQ+ +P LT++ +
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194
Query: 680 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 739
DL +FYK++K RFDEDE FK+ A Q VV LQ DP ++AW+++C SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254
Query: 740 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 794
+ LTERGESFY ++E ++ L+++GLL D+G ++ ++ +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314
Query: 795 FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGF 854
+ Y T+DLAAI R+ E+KA+ I+YVTD GQ HF + + AKKAG L P+ + V F
Sbjct: 315 YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQVAKKAGFL-PDNVAVVHVAF 373
Query: 855 GVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDK--NRHTELTPTELSEAQQAVA 912
G+VLGED KK KTRSG+TVKL ELLD+ + SL L+ + + E T +++ + V
Sbjct: 374 GLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIAKTAETVG 433
Query: 913 YGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAA 972
+KYADLS NR+ +YVFS+DKML+ +GNTA Y+LYAY R+ SI+R GIN +DL +
Sbjct: 434 LSAVKYADLSQNRHSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL---S 490
Query: 973 QSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIE 1032
++ + L+ E E LAK LL++ +V+ V DL + LC+YLY++S ++ FY+NC +
Sbjct: 491 ANSSLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPVL- 549
Query: 1033 KDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
K AE + T RL L + TA+ +K +L I
Sbjct: 550 KAAE----PIKTSRLFLCDLTARTLKLGLSLLGI 579
Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)
Query: 113 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 172
VA++N + FGD+QCN +++L K K K P ++A + L N + +
Sbjct: 32 VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74
Query: 173 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 231
E+A PGF+N+ L Y Q+KD+I N + T N +++VDFSSPNIAKEMHV
Sbjct: 75 CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134
Query: 232 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 289
GHLRSTIIGD I+R+LE+ H V+RLNHVGDWGTQFGMLI +LQ+ +P LT++ +
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194
Query: 290 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 349
DL +FYK++K RFDEDE FK+ A Q VV LQ DP ++AW+++C SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254
Query: 350 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 404
+ LTERGESFY ++E ++ L+++GLL D+G ++ ++ +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314
Query: 405 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
+ Y T+DLAAI R+ E+KA+ I+YVTD + QV Q
Sbjct: 315 YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354
Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 224/340 (65%), Gaps = 28/340 (8%)
Query: 1130 VASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKV 1189
VA++N + FGD+QCN +++L K K K P ++A + L N + +
Sbjct: 32 VAASNPR----FGDYQCNISLSLAKELKQK-----PREVAAT--------LLKNLEIDDL 74
Query: 1190 IDKIEVAKPGFVNVFLSRVYAGEQIKDIIV-NGVQPPTLNKKLRVLVDFSSPNIAKEMHV 1248
E+A PGF+N+ L Y Q+KD+I N + T N +++VDFSSPNIAKEMHV
Sbjct: 75 CQTPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPSQKIIVDFSSPNIAKEMHV 134
Query: 1249 GHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IA 1306
GHLRSTIIGD I+R+LE+ H V+RLNHVGDWGTQFGMLI +LQ+ +P LT++ +
Sbjct: 135 GHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDLG 194
Query: 1307 DLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLN 1366
DL +FYK++K RFDEDE FK+ A Q VV LQ DP ++AW+++C SRR+FQKIYD L+
Sbjct: 195 DLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILD 254
Query: 1367 VTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGG 1421
+ LTERGESFY ++E ++ L+++GLL D+G ++ ++ +P+ + KSDGG
Sbjct: 255 IKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDGG 314
Query: 1422 FTYDTSDLAAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
+ Y T+DLAAI R+ E+KA+ I+YVTD + QV Q
Sbjct: 315 YNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQ 354
>sp|Q5N643|SYR_SYNP6 Arginine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=argS PE=3 SV=1
Length = 584
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/602 (45%), Positives = 376/602 (62%), Gaps = 47/602 (7%)
Query: 481 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 538
L D F A+ +F PE V +TN K FGD+Q N AM+L K + P
Sbjct: 8 LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58
Query: 539 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 595
IA++ L N +LA + + +A PGF+N L Y Q++ + + G+
Sbjct: 59 RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110
Query: 596 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
QP ++ RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168
Query: 656 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
QFGMLIA LQ+++P L++ I+DL AFYK++K RFDED F++ A Q VV LQ +
Sbjct: 169 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228
Query: 714 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
++AW+++CD SRR+FQKIYDRL++ L ERGESFY ++ +V L + GLL D G
Sbjct: 229 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288
Query: 774 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
+ ++ E + +P+ + KSDGG+ Y T+DLAA+R R+ +++A I+YVTD GQ H
Sbjct: 289 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348
Query: 829 FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
F + + A++AG L P +++ V FG+V GED KK KTR+GDTV+L +LLDE + R+
Sbjct: 349 FAQVFQVAQRAGWL-PAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRART 407
Query: 889 KLKDKNRHTEL--TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
L + E TP + QAV G +KYADLS NRN +Y+FSFDKML +GNTA Y
Sbjct: 408 DLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLALQGNTAPY 467
Query: 947 LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE--HEKEFALAKTLLRMNDVLMLVTRD 1004
LLYAY RI IAR GI+ AQ PV+ E E +LAK +L++ +VL V RD
Sbjct: 468 LLYAYVRIQGIARKGGIDF------AQLDPVAAELTEPTERSLAKQVLQLGEVLDEVARD 521
Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
L + LC YL+++S F++FYD C + + + T RLLL + TA+ +K +L
Sbjct: 522 LLPNRLCSYLFELSQTFNQFYDRCPILNAE-----EPQRTSRLLLCDLTARTLKLGLSLL 576
Query: 1065 NI 1066
I
Sbjct: 577 GI 578
Score = 294 bits (752), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/417 (41%), Positives = 250/417 (59%), Gaps = 38/417 (9%)
Query: 91 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 148
L D F A+ +F PE V +TN K FGD+Q N AM+L K + P
Sbjct: 8 LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58
Query: 149 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 205
IA++ L N +LA + + +A PGF+N L Y Q++ + + G+
Sbjct: 59 RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110
Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
QP ++ RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168
Query: 266 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
QFGMLIA LQ+++P L++ I+DL AFYK++K RFDED F++ A Q VV LQ +
Sbjct: 169 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228
Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
++AW+++CD SRR+FQKIYDRL++ L ERGESFY ++ +V L + GLL D G
Sbjct: 229 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288
Query: 384 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
+ ++ E + +P+ + KSDGG+ Y T+DLAA+R R+ +++A I+YVTD +
Sbjct: 289 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348
Query: 439 VLQAIAEEEKKQGISSSSSSQ------TKGT-AKKMNVPVRDRMSVRDYLSDVFTHA 488
Q ++ + +++ + +G KK+ D + +RD L + A
Sbjct: 349 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRA 405
Score = 293 bits (750), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 166/366 (45%), Positives = 232/366 (63%), Gaps = 34/366 (9%)
Query: 1108 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 1165
L D F A+ +F PE V +TN K FGD+Q N AM+L K + P
Sbjct: 8 LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58
Query: 1166 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 1222
IA++ L N +LA + + +A PGF+N L Y Q++ + + G+
Sbjct: 59 RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110
Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
QP ++ RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168
Query: 1283 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
QFGMLIA LQ+++P L++ I+DL AFYK++K RFDED F++ A Q VV LQ +
Sbjct: 169 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228
Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
++AW+++CD SRR+FQKIYDRL++ L ERGESFY ++ +V L + GLL D G
Sbjct: 229 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288
Query: 1401 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH---RS 1452
+ ++ E + +P+ + KSDGG+ Y T+DLAA+R R+ +++A I+YVTD
Sbjct: 289 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348
Query: 1453 YHQVLQ 1458
+ QV Q
Sbjct: 349 FAQVFQ 354
>sp|Q8KPU9|SYR_SYNE7 Arginine--tRNA ligase OS=Synechococcus elongatus (strain PCC 7942)
GN=argS PE=3 SV=2
Length = 584
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/602 (45%), Positives = 376/602 (62%), Gaps = 47/602 (7%)
Query: 481 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 538
L D F A+ +F PE V +TN K FGD+Q N AM+L K + P
Sbjct: 8 LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58
Query: 539 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 595
IA++ L N +LA + + +A PGF+N L Y Q++ + + G+
Sbjct: 59 RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110
Query: 596 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
QP ++ RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168
Query: 656 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
QFGMLIA LQ+++P L++ I+DL AFYK++K RFDED F++ A Q VV LQ +
Sbjct: 169 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228
Query: 714 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
++AW+++CD SRR+FQKIYDRL++ L ERGESFY ++ +V L + GLL D G
Sbjct: 229 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288
Query: 774 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
+ ++ E + +P+ + KSDGG+ Y T+DLAA+R R+ +++A I+YVTD GQ H
Sbjct: 289 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348
Query: 829 FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
F + + A++AG L P +++ V FG+V GED KK KTR+GDTV+L +LLDE + R+
Sbjct: 349 FAQVFQVAQRAGWL-PAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRART 407
Query: 889 KLKDKNRHTEL--TPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
L + E TP + QAV G +KYADLS NRN +Y+FSFDKML +GNTA Y
Sbjct: 408 DLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLALQGNTAPY 467
Query: 947 LLYAYTRIASIARTAGINSEDLRVAAQSTPVS--LEHEKEFALAKTLLRMNDVLMLVTRD 1004
LLYAY RI IAR GI+ AQ PV+ L E +LAK +L++ +VL V RD
Sbjct: 468 LLYAYVRIQGIARKGGIDF------AQLDPVAAVLTEPTERSLAKQVLQLGEVLDEVARD 521
Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
L + LC YL+++S F++FYD C + + + T RLLL + TA+ +K +L
Sbjct: 522 LLPNRLCSYLFELSQTFNQFYDRCPILNAE-----EPQRTSRLLLCDLTARTLKLGLSLL 576
Query: 1065 NI 1066
I
Sbjct: 577 GI 578
Score = 294 bits (752), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/417 (41%), Positives = 250/417 (59%), Gaps = 38/417 (9%)
Query: 91 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 148
L D F A+ +F PE V +TN K FGD+Q N AM+L K + P
Sbjct: 8 LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58
Query: 149 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 205
IA++ L N +LA + + +A PGF+N L Y Q++ + + G+
Sbjct: 59 RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110
Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
QP ++ RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168
Query: 266 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
QFGMLIA LQ+++P L++ I+DL AFYK++K RFDED F++ A Q VV LQ +
Sbjct: 169 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228
Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
++AW+++CD SRR+FQKIYDRL++ L ERGESFY ++ +V L + GLL D G
Sbjct: 229 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288
Query: 384 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQ 438
+ ++ E + +P+ + KSDGG+ Y T+DLAA+R R+ +++A I+YVTD +
Sbjct: 289 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348
Query: 439 VLQAIAEEEKKQGISSSSSSQ------TKGT-AKKMNVPVRDRMSVRDYLSDVFTHA 488
Q ++ + +++ + +G KK+ D + +RD L + A
Sbjct: 349 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRA 405
Score = 293 bits (750), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 166/366 (45%), Positives = 232/366 (63%), Gaps = 34/366 (9%)
Query: 1108 LSDVFTHAVQVAF-PELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNP 1165
L D F A+ +F PE V +TN K FGD+Q N AM+L K + P
Sbjct: 8 LRDRFQAALAASFGPEWAATDPLLVPATNPK----FGDYQSNVAMSLAKQLG-----QPP 58
Query: 1166 FDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN---GV 1222
IA++ L N +LA + + +A PGF+N L Y Q++ + + G+
Sbjct: 59 RAIAET--------LVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGI 110
Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
QP ++ RV+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH+V+RLNHVGDWGT
Sbjct: 111 QP--VSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGT 168
Query: 1283 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
QFGMLIA LQ+++P L++ I+DL AFYK++K RFDED F++ A Q VV LQ +
Sbjct: 169 QFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGE 228
Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
++AW+++CD SRR+FQKIYDRL++ L ERGESFY ++ +V L + GLL D G
Sbjct: 229 ATARQAWQLLCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGA 288
Query: 1401 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH---RS 1452
+ ++ E + +P+ + KSDGG+ Y T+DLAA+R R+ +++A I+YVTD
Sbjct: 289 QCVFLEGFQNKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348
Query: 1453 YHQVLQ 1458
+ QV Q
Sbjct: 349 FAQVFQ 354
>sp|Q10XL4|SYR_TRIEI Arginine--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101)
GN=argS PE=3 SV=1
Length = 585
Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust.
Identities = 272/606 (44%), Positives = 383/606 (63%), Gaps = 46/606 (7%)
Query: 477 VRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
+ + L F A+ AF + +G V++TN K FGD+QCN AM+L K KDK
Sbjct: 4 IVEQLKSRFDKALITAFGQDLVGTDPMIVSTTNPK----FGDYQCNVAMSLAKKLKDK-- 57
Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
++IA+ + + L N E+A PGF+N+ L Y ++ II +
Sbjct: 58 -------PKAIATQIINNLNINDYFYPP----EIAGPGFINLSLKPEYIENCLETIIKDE 106
Query: 595 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
PT N + RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH+V+RLNHVGD
Sbjct: 107 KLNISPTKNPQ-RVVIDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGHNVLRLNHVGD 165
Query: 653 WGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
WGTQFGMLI++L++ FP+ L + I DL AFYK+SKKRFDED+ F++++ Q VV LQ
Sbjct: 166 WGTQFGMLISYLREAFPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQEKSRQEVVNLQ 225
Query: 711 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 770
D + AWE++C+ SRR+FQ IYD L++ L ERGESFY + +V L + GLLE
Sbjct: 226 TGAEDSRHAWELLCNQSRREFQVIYDLLDIKLNERGESFYNSMLPGIVEELNRLGLLEES 285
Query: 771 DGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
DG + ++ GED +P+ + KSDGG+ Y T+DLAA+ RIE+E A ++YVTD
Sbjct: 286 DGAQCVFLSGFTNKEGED---VPLIVKKSDGGYNYATTDLAALVHRIEKEGATRLIYVTD 342
Query: 823 LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
GQ HF + + AKKAG + P + V FG+VLGED KK KTRSG+TV+L +LLDE
Sbjct: 343 AGQANHFSQVWQVAKKAGWI-PENVEIVNVFFGLVLGEDGKKLKTRSGETVRLIDLLDEA 401
Query: 883 LRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDR 940
+ ++ + L+ + + + +E + Q V +KYADLS NR +YVFSFDKML +
Sbjct: 402 INKARNDLEKRLKDEKRLESEEFIKNVAQVVGLSAVKYADLSQNRKSNYVFSFDKMLALQ 461
Query: 941 GNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLML 1000
GNTA YLLYAY R+ I+R IN E LR A+ + L+ E E L K LL++N+VL +
Sbjct: 462 GNTAPYLLYAYVRVQGISRKGEINFEKLRKDAK---IILQDEPELVLGKHLLKLNEVLNI 518
Query: 1001 VTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKC 1060
VT +L + LCEYLY++S F++F++NC ++ + + + T RLLL + TA+ +K
Sbjct: 519 VTIELLPNRLCEYLYELSEKFNKFFENCPVLKSE-----EPLRTSRLLLCDLTARTLKLG 573
Query: 1061 FDILNI 1066
+L I
Sbjct: 574 LYLLGI 579
Score = 293 bits (750), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 230/360 (63%), Gaps = 35/360 (9%)
Query: 87 VRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
+ + L F A+ AF + +G V++TN K FGD+QCN AM+L K KDK
Sbjct: 4 IVEQLKSRFDKALITAFGQDLVGTDPMIVSTTNPK----FGDYQCNVAMSLAKKLKDK-- 57
Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
++IA+ + + L N E+A PGF+N+ L Y ++ II +
Sbjct: 58 -------PKAIATQIINNLNINDYFYPP----EIAGPGFINLSLKPEYIENCLETIIKDE 106
Query: 205 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
PT N + RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH+V+RLNHVGD
Sbjct: 107 KLNISPTKNPQ-RVVIDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGHNVLRLNHVGD 165
Query: 263 WGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
WGTQFGMLI++L++ FP+ L + I DL AFYK+SKKRFDED+ F++++ Q VV LQ
Sbjct: 166 WGTQFGMLISYLREAFPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQEKSRQEVVNLQ 225
Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 380
D + AWE++C+ SRR+FQ IYD L++ L ERGESFY + +V L + GLLE
Sbjct: 226 TGAEDSRHAWELLCNQSRREFQVIYDLLDIKLNERGESFYNSMLPGIVEELNRLGLLEES 285
Query: 381 DGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
DG + ++ GED +P+ + KSDGG+ Y T+DLAA+ RIE+E A ++YVTD
Sbjct: 286 DGAQCVFLSGFTNKEGED---VPLIVKKSDGGYNYATTDLAALVHRIEKEGATRLIYVTD 342
Score = 293 bits (750), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 230/360 (63%), Gaps = 35/360 (9%)
Query: 1104 VRDYLSDVFTHAVQVAFPE--LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
+ + L F A+ AF + +G V++TN K FGD+QCN AM+L K KDK
Sbjct: 4 IVEQLKSRFDKALITAFGQDLVGTDPMIVSTTNPK----FGDYQCNVAMSLAKKLKDK-- 57
Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
++IA+ + + L N E+A PGF+N+ L Y ++ II +
Sbjct: 58 -------PKAIATQIINNLNINDYFYPP----EIAGPGFINLSLKPEYIENCLETIIKDE 106
Query: 1222 VQ--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
PT N + RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH+V+RLNHVGD
Sbjct: 107 KLNISPTKNPQ-RVVIDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGHNVLRLNHVGD 165
Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
WGTQFGMLI++L++ FP+ L + I DL AFYK+SKKRFDED+ F++++ Q VV LQ
Sbjct: 166 WGTQFGMLISYLREAFPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQEKSRQEVVNLQ 225
Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELD 1397
D + AWE++C+ SRR+FQ IYD L++ L ERGESFY + +V L + GLLE
Sbjct: 226 TGAEDSRHAWELLCNQSRREFQVIYDLLDIKLNERGESFYNSMLPGIVEELNRLGLLEES 285
Query: 1398 DGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
DG + ++ GED +P+ + KSDGG+ Y T+DLAA+ RIE+E A ++YVTD
Sbjct: 286 DGAQCVFLSGFTNKEGED---VPLIVKKSDGGYNYATTDLAALVHRIEKEGATRLIYVTD 342
>sp|Q3M769|SYR_ANAVT Arginine--tRNA ligase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=argS PE=3 SV=1
Length = 588
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/566 (45%), Positives = 361/566 (63%), Gaps = 31/566 (5%)
Query: 513 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
KFGD+Q N A++L K ++IAS + +L ++++ + E+A PG
Sbjct: 38 KFGDYQANVALSLSKKLGQP---------PRAIASAIVEKL----DVSEICETPEIAGPG 84
Query: 573 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
F+N+ L Y Q+ I + + PT R +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85 FINLKLKTAYLEAQLNAIQADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144
Query: 632 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 689
+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ P+ LT + I DL +FY+++K
Sbjct: 145 SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204
Query: 690 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 749
+RFD DE F++ A Q VV LQ D AW+++C+ SR++FQ IYD L+V LTERGESF
Sbjct: 205 QRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264
Query: 750 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
Y + +V LE GLL + G K ++ + +P+ + KSDGG+ Y T+DLAA
Sbjct: 265 YNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324
Query: 805 IRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKK 864
+R RI++++A IVYVTD GQ HF + A+KAG + PN + V FG+VLGED KK
Sbjct: 325 LRYRIQKDEAKRIVYVTDAGQANHFAQFFQVARKAGWI-PNDVELVHVPFGLVLGEDGKK 383
Query: 865 FKTRSGDTVKLSELLDEGLRRSLDKLKD--KNRHTELTPTELSEAQQAVAYGCIKYADLS 922
FKTRSGDTV+L +LLDE + R+ L++ K E TP + + + V +KYADLS
Sbjct: 384 FKTRSGDTVRLRDLLDEAVSRAHADLEERLKAEEREETPEFIDKVAEVVGISAVKYADLS 443
Query: 923 HNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHE 982
NR +Y+FS+DKMLD +GNTA Y+LYAY RI I+R GIN DL + V L+H+
Sbjct: 444 QNRTSNYIFSYDKMLDLKGNTAPYMLYAYARIQGISRKGGINFADL---GDNAKVILQHD 500
Query: 983 KEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK-DAEGKIKT 1041
EFALAK LL++ +V+ V DL + LCEYLY++S F+ FYD ++ AE +
Sbjct: 501 TEFALAKYLLQLGEVISTVEADLLPNRLCEYLYELSKKFNTFYDRNQGVQVLSAE---EP 557
Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIR 1067
+ T RL+L + TA+ +K +L I+
Sbjct: 558 LRTSRLVLCDLTARTLKLGLSLLGIQ 583
Score = 276 bits (707), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 207/318 (65%), Gaps = 21/318 (6%)
Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
KFGD+Q N A++L K ++IAS + +L ++++ + E+A PG
Sbjct: 38 KFGDYQANVALSLSKKLGQP---------PRAIASAIVEKL----DVSEICETPEIAGPG 84
Query: 183 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
F+N+ L Y Q+ I + + PT R +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85 FINLKLKTAYLEAQLNAIQADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144
Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 299
+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ P+ LT + I DL +FY+++K
Sbjct: 145 SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204
Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 359
+RFD DE F++ A Q VV LQ D AW+++C+ SR++FQ IYD L+V LTERGESF
Sbjct: 205 QRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264
Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
Y + +V LE GLL + G K ++ + +P+ + KSDGG+ Y T+DLAA
Sbjct: 265 YNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324
Query: 415 IRQRIEEEKADWIVYVTD 432
+R RI++++A IVYVTD
Sbjct: 325 LRYRIQKDEAKRIVYVTD 342
Score = 276 bits (707), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 207/318 (65%), Gaps = 21/318 (6%)
Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
KFGD+Q N A++L K ++IAS + +L ++++ + E+A PG
Sbjct: 38 KFGDYQANVALSLSKKLGQP---------PRAIASAIVEKL----DVSEICETPEIAGPG 84
Query: 1200 FVNVFLSRVYAGEQIKDIIVNG-VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
F+N+ L Y Q+ I + + PT R +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85 FINLKLKTAYLEAQLNAIQADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144
Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESK 1316
+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ P+ LT + I DL +FY+++K
Sbjct: 145 SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204
Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 1376
+RFD DE F++ A Q VV LQ D AW+++C+ SR++FQ IYD L+V LTERGESF
Sbjct: 205 QRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264
Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
Y + +V LE GLL + G K ++ + +P+ + KSDGG+ Y T+DLAA
Sbjct: 265 YNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324
Query: 1432 IRQRIEEEKADWIVYVTD 1449
+R RI++++A IVYVTD
Sbjct: 325 LRYRIQKDEAKRIVYVTD 342
>sp|B2J6I0|SYR_NOSP7 Arginine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=argS PE=3 SV=1
Length = 584
Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/569 (45%), Positives = 363/569 (63%), Gaps = 39/569 (6%)
Query: 513 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 571
KFGD+Q N A++L K K P IA +I + SE+ P E+A P
Sbjct: 38 KFGDYQANVALSLSKKLG-----KQPRAIAGAIVEKLDVSEICEPP---------EIAGP 83
Query: 572 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 628
GF+N+ L Y Q+ DI + GV P R VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84 GFINLKLKTAYLEAQLNDIQADPRLGV--PAAKTPKRENVDFSSPNIAKEMHVGHLRSTI 141
Query: 629 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 686
IGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +PD LT + I DL +FY+
Sbjct: 142 IGDSIARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPDALTTANALDIGDLVSFYR 201
Query: 687 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 746
++K+RFD D F++ A Q VV LQ D AW+++C+ SRR+FQ IY+ L++ LTERG
Sbjct: 202 KAKQRFDTDTAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLTERG 261
Query: 747 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 801
ESFY + +V LEK GLL + G K ++ E + +P+ + KSDGG+ Y T+D
Sbjct: 262 ESFYNPLLSGIVEDLEKSGLLVENQGAKCVFLEGFTNREGEPLPLIVQKSDGGYNYATTD 321
Query: 802 LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
LA++R RI++++A I+YVTD GQG HF + A+KAG + P+ + V FG+VLGED
Sbjct: 322 LASLRYRIQQDQAKRIIYVTDAGQGNHFAQFFQVARKAGWI-PDDVELVHVPFGLVLGED 380
Query: 862 RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYA 919
KKFKTRSGDTV+L +LLDE + + LK + + E TE ++E + V +KYA
Sbjct: 381 GKKFKTRSGDTVRLRDLLDEAVSHAHADLKTRLQKEERQETEEFINEVARVVGISAVKYA 440
Query: 920 DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
DLS NR +Y+FS+DKMLD +GNTA Y+LY Y RI I+R IN ++L + V L
Sbjct: 441 DLSQNRTSNYIFSYDKMLDLKGNTAPYMLYVYARIHGISRKGDINFKEL----GNNAVLL 496
Query: 980 EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
+HE E ALAK LL++++V+ V +DL + LCEYL+++S F++FYD C ++ + +
Sbjct: 497 QHETELALAKYLLQLDEVISSVEQDLLPNRLCEYLFELSQKFNQFYDRCSILQAEEPQR- 555
Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
T RL+L + TA+ +K +L I+
Sbjct: 556 ----TSRLVLCDLTARTLKLGLSLLGIQV 580
Score = 278 bits (712), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 208/321 (64%), Gaps = 27/321 (8%)
Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 181
KFGD+Q N A++L K K P IA +I + SE+ P E+A P
Sbjct: 38 KFGDYQANVALSLSKKLG-----KQPRAIAGAIVEKLDVSEICEPP---------EIAGP 83
Query: 182 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 238
GF+N+ L Y Q+ DI + GV P R VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84 GFINLKLKTAYLEAQLNDIQADPRLGV--PAAKTPKRENVDFSSPNIAKEMHVGHLRSTI 141
Query: 239 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 296
IGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +PD LT + I DL +FY+
Sbjct: 142 IGDSIARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPDALTTANALDIGDLVSFYR 201
Query: 297 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 356
++K+RFD D F++ A Q VV LQ D AW+++C+ SRR+FQ IY+ L++ LTERG
Sbjct: 202 KAKQRFDTDTAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLTERG 261
Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 411
ESFY + +V LEK GLL + G K ++ E + +P+ + KSDGG+ Y T+D
Sbjct: 262 ESFYNPLLSGIVEDLEKSGLLVENQGAKCVFLEGFTNREGEPLPLIVQKSDGGYNYATTD 321
Query: 412 LAAIRQRIEEEKADWIVYVTD 432
LA++R RI++++A I+YVTD
Sbjct: 322 LASLRYRIQQDQAKRIIYVTD 342
Score = 278 bits (712), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 208/321 (64%), Gaps = 27/321 (8%)
Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKP 1198
KFGD+Q N A++L K K P IA +I + SE+ P E+A P
Sbjct: 38 KFGDYQANVALSLSKKLG-----KQPRAIAGAIVEKLDVSEICEPP---------EIAGP 83
Query: 1199 GFVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTI 1255
GF+N+ L Y Q+ DI + GV P R VDFSSPNIAKEMHVGHLRSTI
Sbjct: 84 GFINLKLKTAYLEAQLNDIQADPRLGV--PAAKTPKRENVDFSSPNIAKEMHVGHLRSTI 141
Query: 1256 IGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYK 1313
IGD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLIA+L++ +PD LT + I DL +FY+
Sbjct: 142 IGDSIARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPDALTTANALDIGDLVSFYR 201
Query: 1314 ESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 1373
++K+RFD D F++ A Q VV LQ D AW+++C+ SRR+FQ IY+ L++ LTERG
Sbjct: 202 KAKQRFDTDTAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLTERG 261
Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSD 1428
ESFY + +V LEK GLL + G K ++ E + +P+ + KSDGG+ Y T+D
Sbjct: 262 ESFYNPLLSGIVEDLEKSGLLVENQGAKCVFLEGFTNREGEPLPLIVQKSDGGYNYATTD 321
Query: 1429 LAAIRQRIEEEKADWIVYVTD 1449
LA++R RI++++A I+YVTD
Sbjct: 322 LASLRYRIQQDQAKRIIYVTD 342
>sp|B8HSK8|SYR_CYAP4 Arginine--tRNA ligase OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=argS PE=3 SV=1
Length = 585
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/573 (44%), Positives = 361/573 (63%), Gaps = 46/573 (8%)
Query: 513 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
KFGD+Q N + L K ++IAS + L + + + +A PG
Sbjct: 38 KFGDYQSNAPLPLAKQLNQP---------PRTIASTIVDHL----EVGEAWEPPTIAGPG 84
Query: 573 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 626
F+N L Y Q++ + ++ V+ P LRV+VDFSSPNIAKEMHVGHLRS
Sbjct: 85 FINFTLKTSYLASQLELRLTDPRLGISAVKLP-----LRVVVDFSSPNIAKEMHVGHLRS 139
Query: 627 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAF 684
TIIGD ++R+LE+LGH+V+RLNHVGDWGTQFGMLI +L++ P+ LT + DL AF
Sbjct: 140 TIIGDCLARILEFLGHEVLRLNHVGDWGTQFGMLITYLREVCPEALTAPDAVDLGDLVAF 199
Query: 685 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 744
Y+++K+RFD D F+ A Q VV LQ +PD AW+++C SRR+F+KIY+ L++ LTE
Sbjct: 200 YRQAKQRFDSDPDFQAIARQEVVRLQSGEPDSLHAWQLLCAQSRREFEKIYNLLDIKLTE 259
Query: 745 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDT 799
RGESFY + Q++ L++ GLL D G K ++ E + P+ + KSDGG+ Y T
Sbjct: 260 RGESFYNPLLPQVIQALDQTGLLVEDQGAKCVFLEGYTNKAGDPQPLIVQKSDGGYIYAT 319
Query: 800 SDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLG 859
+DLAA+R RIE+++ADWI+YVTD GQ HF + + A++AG + PN+ R+ V FG+V G
Sbjct: 320 TDLAALRYRIEQDQADWIIYVTDAGQSTHFAQVFQVAQRAGWI-PNRIRLVHVPFGLVQG 378
Query: 860 EDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQAVAYGC 915
ED KK KTRSGDTV+L +LLDE + R+ + +L+ + R TP + Q V G
Sbjct: 379 EDGKKLKTRSGDTVRLQDLLDEAIDRARNDLVSRLEAEGRQE--TPEFIDHVAQVVGIGA 436
Query: 916 IKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQST 975
+KYADLS NR +YVFS+DKML +GNTA YL+YAY R+ I+R I+ E L +
Sbjct: 437 VKYADLSQNRTSNYVFSYDKMLSLQGNTAPYLIYAYVRVQGISRKGQIDLEQL---TEQP 493
Query: 976 PVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDA 1035
+SL+ E+E LA+ LL++ DVL VT DL + LC+YL+++S F++FYD C ++ +
Sbjct: 494 TLSLQEEEEKLLARHLLQLEDVLAQVTEDLLPNRLCQYLFELSQKFNQFYDRCPILQAE- 552
Query: 1036 EGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
+ + RL LA+ TA+ +K +L I+
Sbjct: 553 ----EPLRNSRLGLAQLTARTLKLGLSLLGIQV 581
Score = 281 bits (718), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 207/323 (64%), Gaps = 31/323 (9%)
Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
KFGD+Q N + L K ++IAS + L + + + +A PG
Sbjct: 38 KFGDYQSNAPLPLAKQLNQP---------PRTIASTIVDHL----EVGEAWEPPTIAGPG 84
Query: 183 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 236
F+N L Y Q++ + ++ V+ P LRV+VDFSSPNIAKEMHVGHLRS
Sbjct: 85 FINFTLKTSYLASQLELRLTDPRLGISAVKLP-----LRVVVDFSSPNIAKEMHVGHLRS 139
Query: 237 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAF 294
TIIGD ++R+LE+LGH+V+RLNHVGDWGTQFGMLI +L++ P+ LT + DL AF
Sbjct: 140 TIIGDCLARILEFLGHEVLRLNHVGDWGTQFGMLITYLREVCPEALTAPDAVDLGDLVAF 199
Query: 295 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 354
Y+++K+RFD D F+ A Q VV LQ +PD AW+++C SRR+F+KIY+ L++ LTE
Sbjct: 200 YRQAKQRFDSDPDFQAIARQEVVRLQSGEPDSLHAWQLLCAQSRREFEKIYNLLDIKLTE 259
Query: 355 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDT 409
RGESFY + Q++ L++ GLL D G K ++ E + P+ + KSDGG+ Y T
Sbjct: 260 RGESFYNPLLPQVIQALDQTGLLVEDQGAKCVFLEGYTNKAGDPQPLIVQKSDGGYIYAT 319
Query: 410 SDLAAIRQRIEEEKADWIVYVTD 432
+DLAA+R RIE+++ADWI+YVTD
Sbjct: 320 TDLAALRYRIEQDQADWIIYVTD 342
Score = 281 bits (718), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 207/323 (64%), Gaps = 31/323 (9%)
Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
KFGD+Q N + L K ++IAS + L + + + +A PG
Sbjct: 38 KFGDYQSNAPLPLAKQLNQP---------PRTIASTIVDHL----EVGEAWEPPTIAGPG 84
Query: 1200 FVNVFLSRVYAGEQIK------DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRS 1253
F+N L Y Q++ + ++ V+ P LRV+VDFSSPNIAKEMHVGHLRS
Sbjct: 85 FINFTLKTSYLASQLELRLTDPRLGISAVKLP-----LRVVVDFSSPNIAKEMHVGHLRS 139
Query: 1254 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAF 1311
TIIGD ++R+LE+LGH+V+RLNHVGDWGTQFGMLI +L++ P+ LT + DL AF
Sbjct: 140 TIIGDCLARILEFLGHEVLRLNHVGDWGTQFGMLITYLREVCPEALTAPDAVDLGDLVAF 199
Query: 1312 YKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE 1371
Y+++K+RFD D F+ A Q VV LQ +PD AW+++C SRR+F+KIY+ L++ LTE
Sbjct: 200 YRQAKQRFDSDPDFQAIARQEVVRLQSGEPDSLHAWQLLCAQSRREFEKIYNLLDIKLTE 259
Query: 1372 RGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDT 1426
RGESFY + Q++ L++ GLL D G K ++ E + P+ + KSDGG+ Y T
Sbjct: 260 RGESFYNPLLPQVIQALDQTGLLVEDQGAKCVFLEGYTNKAGDPQPLIVQKSDGGYIYAT 319
Query: 1427 SDLAAIRQRIEEEKADWIVYVTD 1449
+DLAA+R RIE+++ADWI+YVTD
Sbjct: 320 TDLAALRYRIEQDQADWIIYVTD 342
>sp|B1X0N5|SYR_CYAA5 Arginine--tRNA ligase OS=Cyanothece sp. (strain ATCC 51142) GN=argS
PE=3 SV=1
Length = 585
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/566 (44%), Positives = 366/566 (64%), Gaps = 36/566 (6%)
Query: 513 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
+ GD+Q N A+ L K KNP +IAQ I + N SL + + + PG
Sbjct: 38 RHGDYQANIALPLAKKLG-----KNPREIAQIIIN--------NLSLNTICENPTIGGPG 84
Query: 573 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
F+N+ L Y Q+K + N G++ ++ +V+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85 FINLKLKSSYLETQLKSLYQNQRLGIE--KVHNADKVIVDFSSPNIAKEMHVGHLRSTII 142
Query: 630 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKE 687
GD I+R LE+LG++V+RLNHVGDWGTQFGMLI +L++ +PD LT++ I DL FYK+
Sbjct: 143 GDCIARTLEFLGYEVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADVLEIGDLVNFYKQ 202
Query: 688 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
+KKRFDED F++ A + VV LQ D + +KAW+++CD SRR+FQKIYDRL+V L ERGE
Sbjct: 203 AKKRFDEDPKFQEAAREAVVKLQSGDEESRKAWQLLCDQSRREFQKIYDRLDVKLIERGE 262
Query: 748 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 802
SFY ++ ++ L+++G+LE D G + ++ E + +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPYLNDVIKALDEQGILEKDQGAQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDL 322
Query: 803 AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
AA++ RI+E+KA I+YVTD GQ HF + + AKKA L P+ + V FG+V GED
Sbjct: 323 AALKYRIQEDKAKRIIYVTDAGQSNHFAQVFQVAKKANFL-PDTVDVTHVPFGLVKGEDG 381
Query: 863 KKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYAD 920
KK KTRSG+TVKL +LLDE + + L+++ + + +E ++ + V +KYAD
Sbjct: 382 KKLKTRSGETVKLKDLLDEAVNYARKDLENRLQAEDRKESEDFINHVAETVGISAVKYAD 441
Query: 921 LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
LS NR DY+FS+DKML +GNTA Y+LYAY RI SI+R I+ E+L ++ + L+
Sbjct: 442 LSQNRISDYIFSYDKMLALQGNTAPYMLYAYARIQSISREGNIDYENL---GENIQILLK 498
Query: 981 HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIK 1040
+ E L K LL++N+ + V + L + LC+YLY++S F+ FY+NC ++ D +
Sbjct: 499 EDTEIELGKYLLQLNETIKEVEKSLLPNRLCDYLYELSKKFNRFYENCPVLKSD-----E 553
Query: 1041 TVHTGRLLLAEATAKVMKKCFDILNI 1066
V T RLLL + TA+ +K +L I
Sbjct: 554 PVKTSRLLLCDLTARTLKLGLSLLGI 579
Score = 295 bits (755), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 221/332 (66%), Gaps = 28/332 (8%)
Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
+ GD+Q N A+ L K KNP +IAQ I + N SL + + + PG
Sbjct: 38 RHGDYQANIALPLAKKLG-----KNPREIAQIIIN--------NLSLNTICENPTIGGPG 84
Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
F+N+ L Y Q+K + N G++ ++ +V+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85 FINLKLKSSYLETQLKSLYQNQRLGIE--KVHNADKVIVDFSSPNIAKEMHVGHLRSTII 142
Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKE 297
GD I+R LE+LG++V+RLNHVGDWGTQFGMLI +L++ +PD LT++ I DL FYK+
Sbjct: 143 GDCIARTLEFLGYEVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADVLEIGDLVNFYKQ 202
Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
+KKRFDED F++ A + VV LQ D + +KAW+++CD SRR+FQKIYDRL+V L ERGE
Sbjct: 203 AKKRFDEDPKFQEAAREAVVKLQSGDEESRKAWQLLCDQSRREFQKIYDRLDVKLIERGE 262
Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 412
SFY ++ ++ L+++G+LE D G + ++ E + +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPYLNDVIKALDEQGILEKDQGAQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDL 322
Query: 413 AAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 441
AA++ RI+E+KA I+YVTD + QV Q
Sbjct: 323 AALKYRIQEDKAKRIIYVTDAGQSNHFAQVFQ 354
Score = 295 bits (755), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 221/332 (66%), Gaps = 28/332 (8%)
Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
+ GD+Q N A+ L K KNP +IAQ I + N SL + + + PG
Sbjct: 38 RHGDYQANIALPLAKKLG-----KNPREIAQIIIN--------NLSLNTICENPTIGGPG 84
Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
F+N+ L Y Q+K + N G++ ++ +V+VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85 FINLKLKSSYLETQLKSLYQNQRLGIE--KVHNADKVIVDFSSPNIAKEMHVGHLRSTII 142
Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP--PIADLQAFYKE 1314
GD I+R LE+LG++V+RLNHVGDWGTQFGMLI +L++ +PD LT++ I DL FYK+
Sbjct: 143 GDCIARTLEFLGYEVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADVLEIGDLVNFYKQ 202
Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
+KKRFDED F++ A + VV LQ D + +KAW+++CD SRR+FQKIYDRL+V L ERGE
Sbjct: 203 AKKRFDEDPKFQEAAREAVVKLQSGDEESRKAWQLLCDQSRREFQKIYDRLDVKLIERGE 262
Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDL 1429
SFY ++ ++ L+++G+LE D G + ++ E + +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPYLNDVIKALDEQGILEKDQGAQCVFLEGFTNKSGDPLPLIVQKSDGGYNYATTDL 322
Query: 1430 AAIRQRIEEEKADWIVYVTD---HRSYHQVLQ 1458
AA++ RI+E+KA I+YVTD + QV Q
Sbjct: 323 AALKYRIQEDKAKRIIYVTDAGQSNHFAQVFQ 354
>sp|Q8YQU9|SYR_NOSS1 Arginine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=argS PE=3 SV=1
Length = 588
Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust.
Identities = 259/569 (45%), Positives = 363/569 (63%), Gaps = 35/569 (6%)
Query: 513 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
KFGD+Q N A++L K + ++IAS + +L ++++ +K E+A PG
Sbjct: 38 KFGDYQANVALSLSKKLGQQ---------PRAIASAIVEKL----DVSEICEKPEIAGPG 84
Query: 573 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 629
F+N+ L Y Q+ I + GV PT R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85 FINLKLKTAYLEAQLNTIQADTRLGV--PTAKHPQREIVDFSSPNIAKEMHVGHLRSTII 142
Query: 630 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 687
GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ P+ LT + I DL +FY++
Sbjct: 143 GDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQ 202
Query: 688 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 747
+K+RFD DE F++ A Q VV LQ D AW+++C+ SR++FQ IYD L+V LTERGE
Sbjct: 203 AKQRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGE 262
Query: 748 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 802
SFY + +V LEK GLL + G K ++ + +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDL 322
Query: 803 AAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDR 862
AA+R RI++++A I+Y+TD GQ HF + A+KAG + P+ + V FG+VLGED
Sbjct: 323 AALRYRIQKDEAKRIIYITDAGQANHFAQFFQVARKAGWI-PDDVELVHVPFGLVLGEDG 381
Query: 863 KKFKTRSGDTVKLSELLDEGLRRSLD--KLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
KKFKTRSGDTV+L +LLDE + R+ +++ K E T + + + V +KYAD
Sbjct: 382 KKFKTRSGDTVRLRDLLDEAISRAHADVEVRLKAEEREETAEFIDKVAEVVGISAVKYAD 441
Query: 921 LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLE 980
LS NR +Y+FS+DKMLD +GNTA Y+LYAY RI I+R IN DL + V L+
Sbjct: 442 LSQNRTSNYIFSYDKMLDLKGNTAPYMLYAYARIQGISRKGEINFADL---GDNAKVILQ 498
Query: 981 HEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEK-DAEGKI 1039
HE EFALAK LL++ +V+ V DL + LCEYLY++S F+ FYD ++ AE
Sbjct: 499 HETEFALAKYLLQLGEVISTVEEDLSPNRLCEYLYELSKRFNAFYDRNQGVQVLSAE--- 555
Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
+ + T RL+L + TA+ +K +L I+
Sbjct: 556 EPLRTSRLVLCDLTARTLKLGLSLLGIQV 584
Score = 280 bits (717), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 211/320 (65%), Gaps = 25/320 (7%)
Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
KFGD+Q N A++L K + ++IAS + +L ++++ +K E+A PG
Sbjct: 38 KFGDYQANVALSLSKKLGQQ---------PRAIASAIVEKL----DVSEICEKPEIAGPG 84
Query: 183 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 239
F+N+ L Y Q+ I + GV PT R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85 FINLKLKTAYLEAQLNTIQADTRLGV--PTAKHPQREIVDFSSPNIAKEMHVGHLRSTII 142
Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 297
GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ P+ LT + I DL +FY++
Sbjct: 143 GDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQ 202
Query: 298 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 357
+K+RFD DE F++ A Q VV LQ D AW+++C+ SR++FQ IYD L+V LTERGE
Sbjct: 203 AKQRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGE 262
Query: 358 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 412
SFY + +V LEK GLL + G K ++ + +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDL 322
Query: 413 AAIRQRIEEEKADWIVYVTD 432
AA+R RI++++A I+Y+TD
Sbjct: 323 AALRYRIQKDEAKRIIYITD 342
Score = 280 bits (717), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 211/320 (65%), Gaps = 25/320 (7%)
Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
KFGD+Q N A++L K + ++IAS + +L ++++ +K E+A PG
Sbjct: 38 KFGDYQANVALSLSKKLGQQ---------PRAIASAIVEKL----DVSEICEKPEIAGPG 84
Query: 1200 FVNVFLSRVYAGEQIKDIIVN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTII 1256
F+N+ L Y Q+ I + GV PT R +VDFSSPNIAKEMHVGHLRSTII
Sbjct: 85 FINLKLKTAYLEAQLNTIQADTRLGV--PTAKHPQREIVDFSSPNIAKEMHVGHLRSTII 142
Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKE 1314
GD+I+R+LE+ GHDV+RLNHVGDWGTQFGMLI +L++ P+ LT + I DL +FY++
Sbjct: 143 GDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQ 202
Query: 1315 SKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGE 1374
+K+RFD DE F++ A Q VV LQ D AW+++C+ SR++FQ IYD L+V LTERGE
Sbjct: 203 AKQRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGE 262
Query: 1375 SFYQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDL 1429
SFY + +V LEK GLL + G K ++ + +P+ + KSDGG+ Y T+DL
Sbjct: 263 SFYNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDL 322
Query: 1430 AAIRQRIEEEKADWIVYVTD 1449
AA+R RI++++A I+Y+TD
Sbjct: 323 AALRYRIQKDEAKRIIYITD 342
>sp|Q55486|SYR_SYNY3 Arginine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=argS PE=3 SV=1
Length = 584
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 262/602 (43%), Positives = 368/602 (61%), Gaps = 35/602 (5%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
+S+ L+D F A++ FP D T KFGDFQCN A+ L K
Sbjct: 2 VSILTQLNDHFAQALEGQFPS--DVTLPTPLVVPASNPKFGDFQCNIALPLAKQLG---- 55
Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
+ P IA I V +L+++ + + +A PGF+N+ L Y GEQ+ + N
Sbjct: 56 -QPPRAIAMEIVDKV--------NLSEICEPLTIAGPGFINIKLLPDYLGEQLIKLQQNQ 106
Query: 595 VQPPTLNK-KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
+L K + R++VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ G+DV+RLNHVGDW
Sbjct: 107 QLGVSLVKGEERIVVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVLRLNHVGDW 166
Query: 654 GTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
GTQFGMLI +L++ +P+ L + I DL FYK++K+RFD+DE F++ + Q VVALQ
Sbjct: 167 GTQFGMLITYLKEVYPEALVTADALDIGDLVTFYKQAKQRFDQDEQFRETSRQAVVALQA 226
Query: 712 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
D KAW+++C+ SRR+FQ IYD L++T+ ERGESFY + +V L++K LL D+
Sbjct: 227 GDAKSIKAWQLLCEQSRREFQLIYDCLDITIEERGESFYNPFLPGVVELLQEKDLLVEDN 286
Query: 772 GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
G + ++ +D +P+ + KSDGG+ Y T+DLAA+ R+ + A+ I+YVTD GQ
Sbjct: 287 GAQCVFLDGFTNKDGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTDAGQA 346
Query: 827 VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
HF + A+KAGIL + T++ V FG+V GED KK KTR+GDT++L +LL E + R+
Sbjct: 347 NHFAQFFQVAEKAGILT-DPTQVVHVPFGLVKGEDGKKLKTRAGDTIRLKDLLTEAVTRA 405
Query: 887 LDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
L+ + E + TE +E Q V G +KYADLS NR DYVFSFDKML +GNTA
Sbjct: 406 RQDLETRLTAEERSETEEFKTEVAQRVGIGAVKYADLSQNRTSDYVFSFDKMLALQGNTA 465
Query: 945 VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
Y+LYAY RI SI+R GI+ + S + L E LAK LL+ DV+ V
Sbjct: 466 PYMLYAYARIQSISREGGIDFAQM----DSGEIVLTEPTELVLAKNLLQFADVIETVEIS 521
Query: 1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDIL 1064
L + LC+YLY++S F+ FY+NC ++ + RLLL + TA+ +K +L
Sbjct: 522 LLPNRLCDYLYELSKVFNRFYENCPVLKASDPQR-----GSRLLLCDLTARTLKLGLSLL 576
Query: 1065 NI 1066
I
Sbjct: 577 GI 578
Score = 292 bits (748), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 248/421 (58%), Gaps = 30/421 (7%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
+S+ L+D F A++ FP D T KFGDFQCN A+ L K
Sbjct: 2 VSILTQLNDHFAQALEGQFPS--DVTLPTPLVVPASNPKFGDFQCNIALPLAKQLG---- 55
Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
+ P IA I V +L+++ + + +A PGF+N+ L Y GEQ+ + N
Sbjct: 56 -QPPRAIAMEIVDKV--------NLSEICEPLTIAGPGFINIKLLPDYLGEQLIKLQQNQ 106
Query: 205 VQPPTLNK-KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
+L K + R++VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ G+DV+RLNHVGDW
Sbjct: 107 QLGVSLVKGEERIVVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVLRLNHVGDW 166
Query: 264 GTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
GTQFGMLI +L++ +P+ L + I DL FYK++K+RFD+DE F++ + Q VVALQ
Sbjct: 167 GTQFGMLITYLKEVYPEALVTADALDIGDLVTFYKQAKQRFDQDEQFRETSRQAVVALQA 226
Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
D KAW+++C+ SRR+FQ IYD L++T+ ERGESFY + +V L++K LL D+
Sbjct: 227 GDAKSIKAWQLLCEQSRREFQLIYDCLDITIEERGESFYNPFLPGVVELLQEKDLLVEDN 286
Query: 382 GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY 436
G + ++ +D +P+ + KSDGG+ Y T+DLAA+ R+ + A+ I+YVTD
Sbjct: 287 GAQCVFLDGFTNKDGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTDAGQA 346
Query: 437 HQVLQAIAEEEKKQGISSSSS------SQTKGT-AKKMNVPVRDRMSVRDYLSDVFTHAV 489
+ Q EK ++ + KG KK+ D + ++D L++ T A
Sbjct: 347 NHFAQFFQVAEKAGILTDPTQVVHVPFGLVKGEDGKKLKTRAGDTIRLKDLLTEAVTRAR 406
Query: 490 Q 490
Q
Sbjct: 407 Q 407
Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 225/356 (63%), Gaps = 23/356 (6%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
+S+ L+D F A++ FP D T KFGDFQCN A+ L K
Sbjct: 2 VSILTQLNDHFAQALEGQFPS--DVTLPTPLVVPASNPKFGDFQCNIALPLAKQLG---- 55
Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
+ P IA I V +L+++ + + +A PGF+N+ L Y GEQ+ + N
Sbjct: 56 -QPPRAIAMEIVDKV--------NLSEICEPLTIAGPGFINIKLLPDYLGEQLIKLQQNQ 106
Query: 1222 VQPPTLNK-KLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
+L K + R++VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ G+DV+RLNHVGDW
Sbjct: 107 QLGVSLVKGEERIVVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVLRLNHVGDW 166
Query: 1281 GTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
GTQFGMLI +L++ +P+ L + I DL FYK++K+RFD+DE F++ + Q VVALQ
Sbjct: 167 GTQFGMLITYLKEVYPEALVTADALDIGDLVTFYKQAKQRFDQDEQFRETSRQAVVALQA 226
Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
D KAW+++C+ SRR+FQ IYD L++T+ ERGESFY + +V L++K LL D+
Sbjct: 227 GDAKSIKAWQLLCEQSRREFQLIYDCLDITIEERGESFYNPFLPGVVELLQEKDLLVEDN 286
Query: 1399 GRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
G + ++ +D +P+ + KSDGG+ Y T+DLAA+ R+ + A+ I+YVTD
Sbjct: 287 GAQCVFLDGFTNKDGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTD 342
>sp|Q6MEP4|SYR_PARUW Arginine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25)
GN=argS PE=3 SV=1
Length = 584
Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/602 (42%), Positives = 377/602 (62%), Gaps = 43/602 (7%)
Query: 481 LSDVFTHAVQVAFPELGD-----KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
L+++F A AFP+L + ST EK FG +Q N AM L K+ K
Sbjct: 8 LANLFQQATANAFPDLSVLDPNFQPEITPSTQEK----FGHYQFNSAMKLAKLLK----- 58
Query: 536 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
KNP +A++I + +T L P L+K IE+A PGF+N+ S + + + DI++
Sbjct: 59 KNPRQVAEAIVNQLTDSL---PPLSK----IEIAGPGFINMTFSTDFLSKNL-DILLRDA 110
Query: 596 Q--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 653
P K ++++DFSSPN+AKEMHVGHLRST+IGD+++RL E+LGH V+RLNH+GDW
Sbjct: 111 HFGIPFPEKPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHVIRLNHLGDW 170
Query: 654 GTQFGMLIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
GT FGMLIA+++++ P+ L+ + + L ++Y+ SKK+FDE+ FK+RA VVALQ+
Sbjct: 171 GTAFGMLIAYMKEEAPNVLSGEQKTDLTHLVSWYRSSKKKFDEEPEFKRRAQLEVVALQQ 230
Query: 712 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
+ ++AW+MIC++S++ +Q+IY L+V + +RGESFY + +V LEKKGL+++ D
Sbjct: 231 GEQKAREAWQMICEISQKAYQEIYQLLDVKIIDRGESFYNPFLPNIVSDLEKKGLVKISD 290
Query: 772 GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQG 826
G K ++ E + ++P+ I KSDGG+ YDT+D+AAI RI EK D ++Y+TD GQ
Sbjct: 291 GAKCIFLEGFQNREGENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKGDRLIYITDAGQA 350
Query: 827 VHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS 886
HF+++ + A+KA L+ + R+D V FG+VLG D KKF+TRSG+T KL +LL + +
Sbjct: 351 THFQMIFKAAEKAKYLDTTQIRVDHVPFGLVLGTDGKKFRTRSGETEKLIDLLRTAINCA 410
Query: 887 LDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVY 946
L +KN E+ +E +++ G IKYADLS NR DY FS+D+ML GNTA +
Sbjct: 411 DKILSEKN--PEMEESERRHLAKSLGIGAIKYADLSCNRVGDYTFSYDRMLRFEGNTAAF 468
Query: 947 LLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLC 1006
L+YAY RIA I R N L ++T ++LEH E L +LR ++ L L+ DL
Sbjct: 469 LMYAYVRIAGIKRRLKAN---LPAVLENTHINLEHSTEIELGLHILRFHETLNLMANDLL 525
Query: 1007 LHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
+ L +YLY ++ F+ F+ +C EG + RLLL EATAKV+K+ IL +
Sbjct: 526 PNRLTDYLYTLAEKFNAFFRDC-----RVEGTPQ--QNTRLLLCEATAKVLKQGLTILGL 578
Query: 1067 RT 1068
T
Sbjct: 579 TT 580
Score = 291 bits (745), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 268/459 (58%), Gaps = 49/459 (10%)
Query: 91 LSDVFTHAVQVAFPELGD-----KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
L+++F A AFP+L + ST EK FG +Q N AM L K+ K
Sbjct: 8 LANLFQQATANAFPDLSVLDPNFQPEITPSTQEK----FGHYQFNSAMKLAKLLK----- 58
Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
KNP +A++I + +T L P L+K IE+A PGF+N+ S + + + DI++
Sbjct: 59 KNPRQVAEAIVNQLTDSL---PPLSK----IEIAGPGFINMTFSTDFLSKNL-DILLRDA 110
Query: 206 Q--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 263
P K ++++DFSSPN+AKEMHVGHLRST+IGD+++RL E+LGH V+RLNH+GDW
Sbjct: 111 HFGIPFPEKPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHVIRLNHLGDW 170
Query: 264 GTQFGMLIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
GT FGMLIA+++++ P+ L+ + + L ++Y+ SKK+FDE+ FK+RA VVALQ+
Sbjct: 171 GTAFGMLIAYMKEEAPNVLSGEQKTDLTHLVSWYRSSKKKFDEEPEFKRRAQLEVVALQQ 230
Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 381
+ ++AW+MIC++S++ +Q+IY L+V + +RGESFY + +V LEKKGL+++ D
Sbjct: 231 GEQKAREAWQMICEISQKAYQEIYQLLDVKIIDRGESFYNPFLPNIVSDLEKKGLVKISD 290
Query: 382 GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD--HR 434
G K ++ E + ++P+ I KSDGG+ YDT+D+AAI RI EK D ++Y+TD
Sbjct: 291 GAKCIFLEGFQNREGENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKGDRLIYITDAGQA 350
Query: 435 SYHQVLQAIAEEEKKQGISSSSSSQTK-----GTAKKMNVPVRDRMSVRDYLSDVFTHAV 489
++ Q++ AE+ K + GT K R R + L D+ A+
Sbjct: 351 THFQMIFKAAEKAKYLDTTQIRVDHVPFGLVLGTDGK---KFRTRSGETEKLIDLLRTAI 407
Query: 490 QVAFPELGDKTASVASTNEKYVH--------KFGDFQCN 520
A L +K + + +++ K+ D CN
Sbjct: 408 NCADKILSEKNPEMEESERRHLAKSLGIGAIKYADLSCN 446
Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 233/356 (65%), Gaps = 31/356 (8%)
Query: 1108 LSDVFTHAVQVAFPELGD-----KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
L+++F A AFP+L + ST EK FG +Q N AM L K+ K
Sbjct: 8 LANLFQQATANAFPDLSVLDPNFQPEITPSTQEK----FGHYQFNSAMKLAKLLK----- 58
Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
KNP +A++I + +T L P L+K IE+A PGF+N+ S + + + DI++
Sbjct: 59 KNPRQVAEAIVNQLTDSL---PPLSK----IEIAGPGFINMTFSTDFLSKNL-DILLRDA 110
Query: 1223 Q--PPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDW 1280
P K ++++DFSSPN+AKEMHVGHLRST+IGD+++RL E+LGH V+RLNH+GDW
Sbjct: 111 HFGIPFPEKPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHVIRLNHLGDW 170
Query: 1281 GTQFGMLIAHLQDKFPDYLT--KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
GT FGMLIA+++++ P+ L+ + + L ++Y+ SKK+FDE+ FK+RA VVALQ+
Sbjct: 171 GTAFGMLIAYMKEEAPNVLSGEQKTDLTHLVSWYRSSKKKFDEEPEFKRRAQLEVVALQQ 230
Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 1398
+ ++AW+MIC++S++ +Q+IY L+V + +RGESFY + +V LEKKGL+++ D
Sbjct: 231 GEQKAREAWQMICEISQKAYQEIYQLLDVKIIDRGESFYNPFLPNIVSDLEKKGLVKISD 290
Query: 1399 GRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
G K ++ E + ++P+ I KSDGG+ YDT+D+AAI RI EK D ++Y+TD
Sbjct: 291 GAKCIFLEGFQNREGENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKGDRLIYITD 346
>sp|B7KCT7|SYR_CYAP7 Arginine--tRNA ligase OS=Cyanothece sp. (strain PCC 7424) GN=argS
PE=3 SV=1
Length = 585
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 278/610 (45%), Positives = 383/610 (62%), Gaps = 50/610 (8%)
Query: 475 MSVRDYLSDVFTHAVQVAFPE-LGD-KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 532
+S+ + L F A++ AF + D + V +TN K FGD+Q N A++L K K
Sbjct: 2 ISLIEQLKTRFIQALKTAFDQDFSDLEGLVVPATNPK----FGDYQSNVALSLAKPLK-- 55
Query: 533 GEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQ 586
+ P IA+ I + S+L P ++A GF+N+ FL + A Q
Sbjct: 56 ---QPPRTIAEQIIKALDISDLCEPP---------QIAGAGFINLTLKANFLENLLAKIQ 103
Query: 587 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 646
KD + GV+ + RV+VDFSSPNIAKEMHVGHLRSTI+GD I+R+LE+ GHDV+R
Sbjct: 104 -KDSRL-GVEKAS--PSARVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLR 159
Query: 647 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQ 704
LNHVGDWGTQFGMLIA+L++ +P+ LT + + DL AFYK++K RFDEDE FK+ A +
Sbjct: 160 LNHVGDWGTQFGMLIAYLREVYPEALTTADALNLGDLVAFYKKAKVRFDEDETFKETARK 219
Query: 705 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 764
VV LQ D + AW+++CD SRR+FQ IY+ L+V LTERGESFY + ++V L+++
Sbjct: 220 EVVKLQAGAKDTRHAWQLLCDQSRREFQVIYNILDVNLTERGESFYNPLLPEIVGQLDEE 279
Query: 765 GLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 819
GLL D G K ++ E + +P+ + KSD G+ Y T+DLAA++ RI+E+KA+ I+Y
Sbjct: 280 GLLTEDQGAKCVFLEGFTNKEGNPLPLIVQKSDEGYNYATTDLAALKYRIKEDKAERIIY 339
Query: 820 VTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELL 879
VTD GQ HF + + AKKAGI+ P + V FGVV GED KK KTRSGDT+KL +L+
Sbjct: 340 VTDAGQANHFAQVFQVAKKAGII-PENIEVVHVAFGVVKGEDGKKLKTRSGDTIKLKDLI 398
Query: 880 DEGL---RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKM 936
DE + RR L+K ++ E + ++ Q V IKYADLS NR DYVFS+DKM
Sbjct: 399 DEAVAYARRDLEKRLAEDDRKE-SKDFINHVSQVVGISAIKYADLSQNRISDYVFSYDKM 457
Query: 937 LDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMND 996
L +GNTA Y+LYAY RI SI+R I+ E L A+ V L E E AL K LL+ +
Sbjct: 458 LALQGNTAPYMLYAYARIQSISREGNIDFEKLDEKAK---VILSEETELALGKYLLQFTE 514
Query: 997 VLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKV 1056
V+ V +L + LCEYLY++S F++FY+NC ++ +E IK T RL+L + TA+
Sbjct: 515 VIEDVEINLLPNRLCEYLYELSKKFNKFYENCPVLK--SEDPIK---TSRLILCDLTART 569
Query: 1057 MKKCFDILNI 1066
+K +L I
Sbjct: 570 LKLGLSLLGI 579
Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/383 (44%), Positives = 241/383 (62%), Gaps = 38/383 (9%)
Query: 85 MSVRDYLSDVFTHAVQVAFPE-LGD-KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 142
+S+ + L F A++ AF + D + V +TN K FGD+Q N A++L K K
Sbjct: 2 ISLIEQLKTRFIQALKTAFDQDFSDLEGLVVPATNPK----FGDYQSNVALSLAKPLK-- 55
Query: 143 GEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQ 196
+ P IA+ I + S+L P ++A GF+N+ FL + A Q
Sbjct: 56 ---QPPRTIAEQIIKALDISDLCEPP---------QIAGAGFINLTLKANFLENLLAKIQ 103
Query: 197 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 256
KD + GV+ + RV+VDFSSPNIAKEMHVGHLRSTI+GD I+R+LE+ GHDV+R
Sbjct: 104 -KDSRL-GVEKAS--PSARVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLR 159
Query: 257 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQ 314
LNHVGDWGTQFGMLIA+L++ +P+ LT + + DL AFYK++K RFDEDE FK+ A +
Sbjct: 160 LNHVGDWGTQFGMLIAYLREVYPEALTTADALNLGDLVAFYKKAKVRFDEDETFKETARK 219
Query: 315 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 374
VV LQ D + AW+++CD SRR+FQ IY+ L+V LTERGESFY + ++V L+++
Sbjct: 220 EVVKLQAGAKDTRHAWQLLCDQSRREFQVIYNILDVNLTERGESFYNPLLPEIVGQLDEE 279
Query: 375 GLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 429
GLL D G K ++ E + +P+ + KSD G+ Y T+DLAA++ RI+E+KA+ I+Y
Sbjct: 280 GLLTEDQGAKCVFLEGFTNKEGNPLPLIVQKSDEGYNYATTDLAALKYRIKEDKAERIIY 339
Query: 430 VTDHRSYHQVLQAIAEEEKKQGI 452
VTD + Q + + KK GI
Sbjct: 340 VTDAGQANHFAQ-VFQVAKKAGI 361
Score = 278 bits (712), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/375 (45%), Positives = 237/375 (63%), Gaps = 40/375 (10%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPE-LGD-KTASVASTNEKYVHKFGDFQCNDAMALCKIFKDK 1159
+S+ + L F A++ AF + D + V +TN K FGD+Q N A++L K K
Sbjct: 2 ISLIEQLKTRFIQALKTAFDQDFSDLEGLVVPATNPK----FGDYQSNVALSLAKPLK-- 55
Query: 1160 GEKKNPFDIAQSIASVV-TSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQ 1213
+ P IA+ I + S+L P ++A GF+N+ FL + A Q
Sbjct: 56 ---QPPRTIAEQIIKALDISDLCEPP---------QIAGAGFINLTLKANFLENLLAKIQ 103
Query: 1214 IKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVR 1273
KD + GV+ + RV+VDFSSPNIAKEMHVGHLRSTI+GD I+R+LE+ GHDV+R
Sbjct: 104 -KDSRL-GVEKAS--PSARVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLR 159
Query: 1274 LNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQ 1331
LNHVGDWGTQFGMLIA+L++ +P+ LT + + DL AFYK++K RFDEDE FK+ A +
Sbjct: 160 LNHVGDWGTQFGMLIAYLREVYPEALTTADALNLGDLVAFYKKAKVRFDEDETFKETARK 219
Query: 1332 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 1391
VV LQ D + AW+++CD SRR+FQ IY+ L+V LTERGESFY + ++V L+++
Sbjct: 220 EVVKLQAGAKDTRHAWQLLCDQSRREFQVIYNILDVNLTERGESFYNPLLPEIVGQLDEE 279
Query: 1392 GLLELDDGRKIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVY 1446
GLL D G K ++ E + +P+ + KSD G+ Y T+DLAA++ RI+E+KA+ I+Y
Sbjct: 280 GLLTEDQGAKCVFLEGFTNKEGNPLPLIVQKSDEGYNYATTDLAALKYRIKEDKAERIIY 339
Query: 1447 VTD---HRSYHQVLQ 1458
VTD + QV Q
Sbjct: 340 VTDAGQANHFAQVFQ 354
>sp|B7JVP5|SYR_CYAP8 Arginine--tRNA ligase OS=Cyanothece sp. (strain PCC 8801) GN=argS
PE=3 SV=1
Length = 585
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 262/609 (43%), Positives = 371/609 (60%), Gaps = 50/609 (8%)
Query: 476 SVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
S+ + L++ F A+ AF E D V + KFGD+Q N A++L K GE
Sbjct: 3 SINEQLTNYFIQALVKAFGAEFSDIDPIVVPASNP---KFGDYQANIALSLAKKL---GE 56
Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 588
+ P IAQ I N SL + + +A PGF+N+ + Y Q+K
Sbjct: 57 Q--PRAIAQKIID--------NLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSS 106
Query: 589 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
+ V P +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE GH V+RLN
Sbjct: 107 SLGVTKADPIE-----KIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLN 161
Query: 649 HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 706
HVGDWGTQFGMLIA+L + +PD LT + I DL FYK++KKRFDEDE F++ A V
Sbjct: 162 HVGDWGTQFGMLIAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQV 221
Query: 707 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
V LQ D + AW+++C+ SRR+FQ IYD L++ +TERGESFY +E ++ L+ +GL
Sbjct: 222 VKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIIKELDHQGL 281
Query: 767 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 821
L+ D G + ++ + +P+ + KSDGG+ Y T+DLAA++ RI +++A+ I+YVT
Sbjct: 282 LKKDAGAQCVFLDGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341
Query: 822 DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDE 881
D GQ HF + + AKKA I+ P + V FG+V GED KK KTRSG T+KL +LLDE
Sbjct: 342 DAGQANHFAQVFQVAKKAHII-PKNVEIIHVPFGLVKGEDGKKLKTRSGTTIKLRDLLDE 400
Query: 882 GL---RRSLDK-LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
+ R+ L+K L ++ R + ++ Q V +KYADLS NR DY+FS+DKML
Sbjct: 401 AVIYARQDLEKRLAEEGRQE--SEDFIANVSQVVGISAVKYADLSQNRTSDYIFSYDKML 458
Query: 938 DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
+GNTA Y+LYAY RI SI+R I+ E L+ Q + L+ E E L K LL++++V
Sbjct: 459 ALQGNTAPYMLYAYARIQSISREGNIDFESLQ---QEAKIILQEETEIELGKYLLQLSEV 515
Query: 998 LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
+ V + L + LC+YLY++S F+ FY+NC ++ + + + T RLLL + TA+ +
Sbjct: 516 IEEVEKTLLPNRLCDYLYELSKKFNRFYENCPVLKSE-----EPLRTSRLLLCDLTARTL 570
Query: 1058 KKCFDILNI 1066
K +L I
Sbjct: 571 KLGLSLLGI 579
Score = 280 bits (717), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 171/426 (40%), Positives = 242/426 (56%), Gaps = 42/426 (9%)
Query: 86 SVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
S+ + L++ F A+ AF E D V + KFGD+Q N A++L K GE
Sbjct: 3 SINEQLTNYFIQALVKAFGAEFSDIDPIVVPASNP---KFGDYQANIALSLAKKL---GE 56
Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 198
+ P IAQ I N SL + + +A PGF+N+ + Y Q+K
Sbjct: 57 Q--PRAIAQKIID--------NLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSS 106
Query: 199 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
+ V P +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE GH V+RLN
Sbjct: 107 SLGVTKADPIE-----KIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLN 161
Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 316
HVGDWGTQFGMLIA+L + +PD LT + I DL FYK++KKRFDEDE F++ A V
Sbjct: 162 HVGDWGTQFGMLIAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQV 221
Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
V LQ D + AW+++C+ SRR+FQ IYD L++ +TERGESFY +E ++ L+ +GL
Sbjct: 222 VKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIIKELDHQGL 281
Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 431
L+ D G + ++ + +P+ + KSDGG+ Y T+DLAA++ RI +++A+ I+YVT
Sbjct: 282 LKKDAGAQCVFLDGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341
Query: 432 DHRSYHQVLQAIAEEEKKQGISSSSS------SQTKGT-AKKMNVPVRDRMSVRDYLSDV 484
D + Q +K I + KG KK+ + +RD L +
Sbjct: 342 DAGQANHFAQVFQVAKKAHIIPKNVEIIHVPFGLVKGEDGKKLKTRSGTTIKLRDLLDEA 401
Query: 485 FTHAVQ 490
+A Q
Sbjct: 402 VIYARQ 407
Score = 280 bits (717), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 226/373 (60%), Gaps = 38/373 (10%)
Query: 1103 SVRDYLSDVFTHAVQVAF-PELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
S+ + L++ F A+ AF E D V + KFGD+Q N A++L K GE
Sbjct: 3 SINEQLTNYFIQALVKAFGAEFSDIDPIVVPASNP---KFGDYQANIALSLAKKL---GE 56
Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK------ 1215
+ P IAQ I N SL + + +A PGF+N+ + Y Q+K
Sbjct: 57 Q--PRAIAQKIID--------NLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSS 106
Query: 1216 DIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
+ V P +++VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE GH V+RLN
Sbjct: 107 SLGVTKADPIE-----KIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLN 161
Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
HVGDWGTQFGMLIA+L + +PD LT + I DL FYK++KKRFDEDE F++ A V
Sbjct: 162 HVGDWGTQFGMLIAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQV 221
Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
V LQ D + AW+++C+ SRR+FQ IYD L++ +TERGESFY +E ++ L+ +GL
Sbjct: 222 VKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIIKELDHQGL 281
Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVT 1448
L+ D G + ++ + +P+ + KSDGG+ Y T+DLAA++ RI +++A+ I+YVT
Sbjct: 282 LKKDAGAQCVFLDGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341
Query: 1449 D---HRSYHQVLQ 1458
D + QV Q
Sbjct: 342 DAGQANHFAQVFQ 354
>sp|Q8DKN4|SYR_THEEB Arginine--tRNA ligase OS=Thermosynechococcus elongatus (strain BP-1)
GN=argS PE=3 SV=1
Length = 584
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/601 (42%), Positives = 367/601 (61%), Gaps = 45/601 (7%)
Query: 481 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
L D A+Q A P + ++ KFGD+Q N ++L K K P +
Sbjct: 8 LGDRLRRALQAALPLDTYPQPLLVPASQV---KFGDYQSNVCLSLAKQLG-----KAPRE 59
Query: 541 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQIKDIIVNGV 595
+AQ + + E P +E+A PGF+N FL+ + D + G+
Sbjct: 60 LAQEVVPHLEVEDLCQP--------VEIAGPGFLNFRLKPEFLAATLQAARGSDRL--GI 109
Query: 596 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
PP + RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 110 -PPAREPR-RVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGHTVLRLNHVGDWGT 167
Query: 656 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
QFGMLIA+L + +PD LT + + DL FYK++K+RFD D F+++A VVALQ+ +
Sbjct: 168 QFGMLIAYLDEVYPDALTTANALDLGDLVTFYKKAKQRFDSDPEFQQKARAKVVALQQGE 227
Query: 714 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
++AW+++C+ SRR+FQKIYD L++ LTERGESFY + ++ L GLL D G
Sbjct: 228 EQSRRAWQLLCEQSRREFQKIYDLLDIQLTERGESFYNPFLPAVIEDLAACGLLVEDQGA 287
Query: 774 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
K+++ E + P+ I KSDGG+ Y T+DLAA+R RI++++ADWI+YVTD+GQ H
Sbjct: 288 KVVFLEGFTNKEGQPQPLIIQKSDGGYNYATTDLAALRYRIDKDQADWIIYVTDVGQSTH 347
Query: 829 FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
F + + A++AG + P+ T + V FG+VLGED K+ KTRSG+T++L +LL E + RS
Sbjct: 348 FAQVFQVAQRAGWVPPHVT-LTHVPFGLVLGEDGKRLKTRSGETIRLIDLLTEAIARSRA 406
Query: 889 KLKDK---NRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAV 945
L+ + TE +P + +A+ G +KYADLS NRN +YVFS+DKML +GNTA
Sbjct: 407 DLEQRLATEGRTE-SPEFIDTVARAIGIGAVKYADLSQNRNSNYVFSYDKMLSLQGNTAP 465
Query: 946 YLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDL 1005
YLLYAY R+ + R I D + +P+ LE E E LAK L+++ + L LV+ +L
Sbjct: 466 YLLYAYVRVQGLTRRGDI---DWCTLSPDSPLLLEDETEQHLAKHLVQLEETLDLVSTEL 522
Query: 1006 CLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILN 1065
+ LC+YL+++S F++FYD C + K RL LA TA+ +K +L
Sbjct: 523 LPNRLCQYLFELSQLFNQFYDRCPILSAPQPTK-----QSRLTLAYLTAQTLKLGLSLLG 577
Query: 1066 I 1066
I
Sbjct: 578 I 578
Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 32/354 (9%)
Query: 91 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
L D A+Q A P + ++ KFGD+Q N ++L K K P +
Sbjct: 8 LGDRLRRALQAALPLDTYPQPLLVPASQV---KFGDYQSNVCLSLAKQLG-----KAPRE 59
Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQIKDIIVNGV 205
+AQ + + E P +E+A PGF+N FL+ + D + G+
Sbjct: 60 LAQEVVPHLEVEDLCQP--------VEIAGPGFLNFRLKPEFLAATLQAARGSDRL--GI 109
Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
PP + RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 110 -PPAREPR-RVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGHTVLRLNHVGDWGT 167
Query: 266 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
QFGMLIA+L + +PD LT + + DL FYK++K+RFD D F+++A VVALQ+ +
Sbjct: 168 QFGMLIAYLDEVYPDALTTANALDLGDLVTFYKKAKQRFDSDPEFQQKARAKVVALQQGE 227
Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
++AW+++C+ SRR+FQKIYD L++ LTERGESFY + ++ L GLL D G
Sbjct: 228 EQSRRAWQLLCEQSRREFQKIYDLLDIQLTERGESFYNPFLPAVIEDLAACGLLVEDQGA 287
Query: 384 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
K+++ E + P+ I KSDGG+ Y T+DLAA+R RI++++ADWI+YVTD
Sbjct: 288 KVVFLEGFTNKEGQPQPLIIQKSDGGYNYATTDLAALRYRIDKDQADWIIYVTD 341
Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 32/354 (9%)
Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
L D A+Q A P + ++ KFGD+Q N ++L K K P +
Sbjct: 8 LGDRLRRALQAALPLDTYPQPLLVPASQV---KFGDYQSNVCLSLAKQLG-----KAPRE 59
Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV-----FLSRVYAGEQIKDIIVNGV 1222
+AQ + + E P +E+A PGF+N FL+ + D + G+
Sbjct: 60 LAQEVVPHLEVEDLCQP--------VEIAGPGFLNFRLKPEFLAATLQAARGSDRL--GI 109
Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
PP + RV+VDFSSPNIAKEMHVGHLRSTIIGD I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 110 -PPAREPR-RVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGHTVLRLNHVGDWGT 167
Query: 1283 QFGMLIAHLQDKFPDYLTKSPP--IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
QFGMLIA+L + +PD LT + + DL FYK++K+RFD D F+++A VVALQ+ +
Sbjct: 168 QFGMLIAYLDEVYPDALTTANALDLGDLVTFYKKAKQRFDSDPEFQQKARAKVVALQQGE 227
Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
++AW+++C+ SRR+FQKIYD L++ LTERGESFY + ++ L GLL D G
Sbjct: 228 EQSRRAWQLLCEQSRREFQKIYDLLDIQLTERGESFYNPFLPAVIEDLAACGLLVEDQGA 287
Query: 1401 KIMWGE-----DRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
K+++ E + P+ I KSDGG+ Y T+DLAA+R RI++++ADWI+YVTD
Sbjct: 288 KVVFLEGFTNKEGQPQPLIIQKSDGGYNYATTDLAALRYRIDKDQADWIIYVTD 341
>sp|Q3KLP4|SYR_CHLTA Arginine--tRNA ligase OS=Chlamydia trachomatis serovar A (strain
HAR-13 / ATCC VR-571B) GN=argS PE=3 SV=1
Length = 563
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/596 (41%), Positives = 354/596 (59%), Gaps = 42/596 (7%)
Query: 476 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
++ +L+ + + A+ AFPEL + T + + +++ FG +QCNDAM L ++ +
Sbjct: 3 TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54
Query: 536 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 592
K+P IA+SI + + P IE+A GF+N S+ + Q++ +
Sbjct: 55 KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105
Query: 593 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
NG + + K V++DFSSPNIAK+MHVGHLRSTIIGD ++R ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162
Query: 653 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
WGT FGMLI +LQ+ + + + + DL A YK++ RF ED FKKR+ VVALQ
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219
Query: 713 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
D W+ IC VS + FQ IY L+V L RGESFY + ++V LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279
Query: 773 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
K ++ E SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LL
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338
Query: 833 EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
E AG L P+K VGFG+VL +KFKTRSG+ +KL ELLD + ++ + L
Sbjct: 339 EATCLAAGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESL-- 395
Query: 893 KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
K +++ EL+ + IKYADLS +R DYVFSF+KML GNTA+ LLYAY
Sbjct: 396 KAHRPDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYV 455
Query: 953 RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
RI I R G+ S Q P+++ E ALA TLLR ++L L R+LC H L +
Sbjct: 456 RIQGIKRRMGLES-----LPQEEPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTD 510
Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
YLY ++ F+ F+ +C+ D++ + RL L T + + +L ++T
Sbjct: 511 YLYALTNKFNAFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559
Score = 278 bits (712), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 224/362 (61%), Gaps = 29/362 (8%)
Query: 86 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
++ +L+ + + A+ AFPEL + T + + +++ FG +QCNDAM L ++ +
Sbjct: 3 TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54
Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 202
K+P IA+SI + + P IE+A GF+N S+ + Q++ +
Sbjct: 55 KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105
Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
NG + + K V++DFSSPNIAK+MHVGHLRSTIIGD ++R ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162
Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
WGT FGMLI +LQ+ + + + + DL A YK++ RF ED FKKR+ VVALQ
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219
Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
D W+ IC VS + FQ IY L+V L RGESFY + ++V LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279
Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVL 440
K ++ E SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD +S H Q+L
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338
Query: 441 QA 442
+A
Sbjct: 339 EA 340
Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 216/350 (61%), Gaps = 27/350 (7%)
Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
++ +L+ + + A+ AFPEL + T + + +++ FG +QCNDAM L ++ +
Sbjct: 3 TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLR----- 54
Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 1219
K+P IA+SI + + P IE+A GF+N S+ + Q++ +
Sbjct: 55 KSPRAIAESI----VAHIPPAP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105
Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
NG + + K V++DFSSPNIAK+MHVGHLRSTIIGD ++R ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162
Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
WGT FGMLI +LQ+ + + + + DL A YK++ RF ED FKKR+ VVALQ
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219
Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
D W+ IC VS + FQ IY L+V L RGESFY + ++V LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279
Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
K ++ E SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328
>sp|O84460|SYR_CHLTR Arginine--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=argS PE=3 SV=1
Length = 563
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/596 (41%), Positives = 353/596 (59%), Gaps = 42/596 (7%)
Query: 476 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
++ +L+ + + A+ AFPEL + T + + +++ FG +QCNDAM L ++
Sbjct: 3 TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54
Query: 536 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 592
K+P IA+SI + + P IE+A GF+N S+ + Q++ +
Sbjct: 55 KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105
Query: 593 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 652
NG + + K V++DFSSPNIAK+MHVGHLRSTIIGD ++R ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162
Query: 653 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 712
WGT FGMLI +LQ+ + + + + DL A YK++ RF ED FKKR+ VVALQ
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219
Query: 713 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 772
D W+ IC VS + FQ IY L+V L RGESFY + ++V LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279
Query: 773 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLL 832
K ++ E SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD GQ +HF+LL
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338
Query: 833 EECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKD 892
E AG L P+K VGFG+VL +KFKTRSG+ +KL ELLD + ++ + LK
Sbjct: 339 EATCLAAGYL-PSKGIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKA 397
Query: 893 KNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYT 952
+++ EL+ + IKYADLS +R DYVFSF+KML GNTA+ LLYAY
Sbjct: 398 HR--PDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKMLRFEGNTAMSLLYAYV 455
Query: 953 RIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCE 1012
RI I R G+ S Q P+++ E ALA TLLR ++L L R+LC H L +
Sbjct: 456 RIQGIKRRMGLES-----PPQEGPLAVHEPAEEALALTLLRFPEILDLTLRELCPHFLTD 510
Query: 1013 YLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
YLY ++ F+ F+ +C+ D++ + RL L T + + +L ++T
Sbjct: 511 YLYALTNKFNAFFRDCHIEGSDSQQE-------RLYLCGLTERTLSTGMHLLGLKT 559
Score = 278 bits (710), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 223/362 (61%), Gaps = 29/362 (8%)
Query: 86 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
++ +L+ + + A+ AFPEL + T + + +++ FG +QCNDAM L ++
Sbjct: 3 TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54
Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 202
K+P IA+SI + + P IE+A GF+N S+ + Q++ +
Sbjct: 55 KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105
Query: 203 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 262
NG + + K V++DFSSPNIAK+MHVGHLRSTIIGD ++R ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162
Query: 263 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 322
WGT FGMLI +LQ+ + + + + DL A YK++ RF ED FKKR+ VVALQ
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219
Query: 323 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 382
D W+ IC VS + FQ IY L+V L RGESFY + ++V LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279
Query: 383 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVL 440
K ++ E SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD +S H Q+L
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLL 338
Query: 441 QA 442
+A
Sbjct: 339 EA 340
Score = 277 bits (708), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 215/350 (61%), Gaps = 27/350 (7%)
Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
++ +L+ + + A+ AFPEL + T + + +++ FG +QCNDAM L ++
Sbjct: 3 TLLSFLTSLCSAAIHQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARVLH----- 54
Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---IV 1219
K+P IA+SI + + P IE+A GF+N S+ + Q++ +
Sbjct: 55 KSPRAIAESI----VAHIPPTP-----FSSIEIAGAGFINFTFSKEFLASQLQTFSKELA 105
Query: 1220 NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGD 1279
NG + + K V++DFSSPNIAK+MHVGHLRSTIIGD ++R ++GHDV+RLNH+GD
Sbjct: 106 NGFRAASPQK---VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGD 162
Query: 1280 WGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRF 1339
WGT FGMLI +LQ+ + + + + DL A YK++ RF ED FKKR+ VVALQ
Sbjct: 163 WGTAFGMLITYLQETSQEAIHQ---LEDLTALYKKAHARFAEDSEFKKRSQHNVVALQSG 219
Query: 1340 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDG 1399
D W+ IC VS + FQ IY L+V L RGESFY + ++V LE K L+ L DG
Sbjct: 220 DAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDG 279
Query: 1400 RKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
K ++ E SIP+ I KSDGG+ Y T+D+AA+R RI++++AD I+ VTD
Sbjct: 280 AKCVFHEAF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTD 328
>sp|Q7VE03|SYR_PROMA Arginine--tRNA ligase OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=argS PE=3 SV=1
Length = 603
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/615 (41%), Positives = 371/615 (60%), Gaps = 50/615 (8%)
Query: 481 LSDVFTHAVQVAFPELGDKTASVAS-TNEKYVH----KFGDFQCNDAMALCKIFKDKGEK 535
L+ A+ AFPE + N + V +FGDFQ N A+AL +I K
Sbjct: 8 LNQQVQRALNTAFPEAASQVKESGDFLNPQLVAATKPEFGDFQINGALALARIIK----- 62
Query: 536 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK-----DI 590
K+P + IA ++ +L +N + E+A PGF+N+ L +I D+
Sbjct: 63 KSP----RQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCLINEITSRLNDDL 118
Query: 591 I-VNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
+ V V + KKL+ V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+L Y G+ V+RLN
Sbjct: 119 LGVPLVNDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILNYRGYKVIRLN 178
Query: 649 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 706
HVGDWGTQFGMLI HL++ P LT + I +L FYK++K+RFDEDE F++ + V
Sbjct: 179 HVGDWGTQFGMLITHLKEVAPKALTTANVINLGNLVEFYKKAKQRFDEDEYFQQCSRNEV 238
Query: 707 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
V LQR + + KAWE++C+ SR++F KIYDRL + ++ERGESFY ++ ++ L + GL
Sbjct: 239 VNLQRGNKESLKAWELLCEQSRKEFNKIYDRLKIEISERGESFYNPFLQGVIDDLTRSGL 298
Query: 767 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK----ADWI 817
L DDG K ++ G+D +P+ I K+DGGF Y T+DLAAIR R++++ A I
Sbjct: 299 LVEDDGAKCVFLNGINGKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRI 358
Query: 818 VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
+YVTD GQ HF + + AK+A L P+ +R++ V FG+V GED KK KTRSG+TV+L +
Sbjct: 359 IYVTDSGQANHFAGVFQVAKRAKWL-PSSSRIEHVPFGLVQGEDGKKLKTRSGETVRLKD 417
Query: 878 LLDEGLRRS-LD---KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSF 933
LLDE + R+ LD +L ++NR + + + + +KYADLS NR +Y FSF
Sbjct: 418 LLDEAISRAKLDIERRLNEENRKE--SQAFIEKVSNTIGIAAVKYADLSQNRITNYQFSF 475
Query: 934 DKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLR 993
D+ML +GNTA YLLYA RIA I R G DL + ++ +E+ L + LL+
Sbjct: 476 DRMLALQGNTAPYLLYAVVRIAGINRKGG----DLHSSVNK--LNFSEPQEWRLIRELLK 529
Query: 994 MNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEAT 1053
++V++ V +L + LC YL+++S F+ FYD ++ + + + RL L + T
Sbjct: 530 FDEVIIAVEEELLPNRLCNYLFELSQVFNRFYDQIPVLKAEEPSR-----SCRLALCQLT 584
Query: 1054 AKVMKKCFDILNIRT 1068
+KK ++L I T
Sbjct: 585 GDTLKKGLNLLGIST 599
Score = 283 bits (725), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 235/389 (60%), Gaps = 32/389 (8%)
Query: 91 LSDVFTHAVQVAFPELGDKTASVAS-TNEKYVH----KFGDFQCNDAMALCKIFKDKGEK 145
L+ A+ AFPE + N + V +FGDFQ N A+AL +I K
Sbjct: 8 LNQQVQRALNTAFPEAASQVKESGDFLNPQLVAATKPEFGDFQINGALALARIIK----- 62
Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK-----DI 200
K+P + IA ++ +L +N + E+A PGF+N+ L +I D+
Sbjct: 63 KSP----RQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCLINEITSRLNDDL 118
Query: 201 I-VNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
+ V V + KKL+ V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+L Y G+ V+RLN
Sbjct: 119 LGVPLVNDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILNYRGYKVIRLN 178
Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 316
HVGDWGTQFGMLI HL++ P LT + I +L FYK++K+RFDEDE F++ + V
Sbjct: 179 HVGDWGTQFGMLITHLKEVAPKALTTANVINLGNLVEFYKKAKQRFDEDEYFQQCSRNEV 238
Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
V LQR + + KAWE++C+ SR++F KIYDRL + ++ERGESFY ++ ++ L + GL
Sbjct: 239 VNLQRGNKESLKAWELLCEQSRKEFNKIYDRLKIEISERGESFYNPFLQGVIDDLTRSGL 298
Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK----ADWI 427
L DDG K ++ G+D +P+ I K+DGGF Y T+DLAAIR R++++ A I
Sbjct: 299 LVEDDGAKCVFLNGINGKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRI 358
Query: 428 VYVTDHRSYHQVLQAIAEEEKKQGISSSS 456
+YVTD + ++ + + SSS
Sbjct: 359 IYVTDSGQANHFAGVFQVAKRAKWLPSSS 387
Score = 283 bits (724), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/365 (44%), Positives = 227/365 (62%), Gaps = 32/365 (8%)
Query: 1108 LSDVFTHAVQVAFPELGDKTASVAS-TNEKYVH----KFGDFQCNDAMALCKIFKDKGEK 1162
L+ A+ AFPE + N + V +FGDFQ N A+AL +I K
Sbjct: 8 LNQQVQRALNTAFPEAASQVKESGDFLNPQLVAATKPEFGDFQINGALALARIIK----- 62
Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIK-----DI 1217
K+P + IA ++ +L +N + E+A PGF+N+ L +I D+
Sbjct: 63 KSP----RQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCLINEITSRLNDDL 118
Query: 1218 I-VNGVQPPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
+ V V + KKL+ V+VDFSSPNIAKEMHVGHLRSTIIGD+I+R+L Y G+ V+RLN
Sbjct: 119 LGVPLVNDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILNYRGYKVIRLN 178
Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
HVGDWGTQFGMLI HL++ P LT + I +L FYK++K+RFDEDE F++ + V
Sbjct: 179 HVGDWGTQFGMLITHLKEVAPKALTTANVINLGNLVEFYKKAKQRFDEDEYFQQCSRNEV 238
Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
V LQR + + KAWE++C+ SR++F KIYDRL + ++ERGESFY ++ ++ L + GL
Sbjct: 239 VNLQRGNKESLKAWELLCEQSRKEFNKIYDRLKIEISERGESFYNPFLQGVIDDLTRSGL 298
Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEK----ADWI 1444
L DDG K ++ G+D +P+ I K+DGGF Y T+DLAAIR R++++ A I
Sbjct: 299 LVEDDGAKCVFLNGINGKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRI 358
Query: 1445 VYVTD 1449
+YVTD
Sbjct: 359 IYVTD 363
>sp|A5GP97|SYR_SYNPW Arginine--tRNA ligase OS=Synechococcus sp. (strain WH7803) GN=argS
PE=3 SV=1
Length = 597
Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust.
Identities = 246/570 (43%), Positives = 343/570 (60%), Gaps = 35/570 (6%)
Query: 513 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 572
+FGDFQ N A+AL K K + IA+ + ++L +P+ + + ++A PG
Sbjct: 45 EFGDFQANGALALAKPLKQA---------PRQIATAIVAQLQADPAFTDLCLEPQIAGPG 95
Query: 573 FVNVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 631
F+N+ + A E + + P + + V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 96 FINLTVRPERLAAEVSARLGDQRLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGD 155
Query: 632 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESK 689
+++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+ PD L + + DL AFY+E+K
Sbjct: 156 SLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDLGDLVAFYREAK 215
Query: 690 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 749
KRFD+DE F+ + + VV LQ DP KAW ++CD SRR+FQKIYDRL++ L ERGESF
Sbjct: 216 KRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESF 275
Query: 750 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 804
Y + ++ L+ LL DDG + ++ G+D +P+ + KSDGGF Y T+DLAA
Sbjct: 276 YNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAA 335
Query: 805 IRQRI----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
IR R + + A ++YVTD GQ HF + + A++AG + P R++ V FG+V GE
Sbjct: 336 IRYRFGAAPDGDDARRVIYVTDAGQANHFAGVFQVAQRAGWI-PEGARLEHVPFGLVQGE 394
Query: 861 DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKY 918
D KK KTR+GDTV+L +LLDE + R+ L+ + E + +E + V +KY
Sbjct: 395 DGKKLKTRAGDTVRLRDLLDEAVERAETDLRSRLNEEERSESEEFIQHVAGTVGLAAVKY 454
Query: 919 ADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVS 978
ADLS NR +Y FSFD+ML +GNTA YLLYA RIA IAR G DL V + +
Sbjct: 455 ADLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG----DLEVL--TGQLQ 508
Query: 979 LEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGK 1038
+E+AL + LL+ + V+ V +L + LC YL+++S F+ FYD ++ DAE
Sbjct: 509 FSEPQEWALVRELLKFDAVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLKADAE-- 566
Query: 1039 IKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
RL L TA +K +L I T
Sbjct: 567 ---ALPSRLALCRLTADTLKSGLGLLGIPT 593
Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/322 (45%), Positives = 205/322 (63%), Gaps = 21/322 (6%)
Query: 123 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 182
+FGDFQ N A+AL K K + IA+ + ++L +P+ + + ++A PG
Sbjct: 45 EFGDFQANGALALAKPLKQA---------PRQIATAIVAQLQADPAFTDLCLEPQIAGPG 95
Query: 183 FVNVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 241
F+N+ + A E + + P + + V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 96 FINLTVRPERLAAEVSARLGDQRLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGD 155
Query: 242 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESK 299
+++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+ PD L + + DL AFY+E+K
Sbjct: 156 SLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDLGDLVAFYREAK 215
Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 359
KRFD+DE F+ + + VV LQ DP KAW ++CD SRR+FQKIYDRL++ L ERGESF
Sbjct: 216 KRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESF 275
Query: 360 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 414
Y + ++ L+ LL DDG + ++ G+D +P+ + KSDGGF Y T+DLAA
Sbjct: 276 YNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAA 335
Query: 415 IRQRI----EEEKADWIVYVTD 432
IR R + + A ++YVTD
Sbjct: 336 IRYRFGAAPDGDDARRVIYVTD 357
Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/322 (45%), Positives = 205/322 (63%), Gaps = 21/322 (6%)
Query: 1140 KFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPG 1199
+FGDFQ N A+AL K K + IA+ + ++L +P+ + + ++A PG
Sbjct: 45 EFGDFQANGALALAKPLKQA---------PRQIATAIVAQLQADPAFTDLCLEPQIAGPG 95
Query: 1200 FVNVFL-SRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD 1258
F+N+ + A E + + P + + V+VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 96 FINLTVRPERLAAEVSARLGDQRLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGD 155
Query: 1259 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESK 1316
+++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+ PD L + + DL AFY+E+K
Sbjct: 156 SLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDLGDLVAFYREAK 215
Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESF 1376
KRFD+DE F+ + + VV LQ DP KAW ++CD SRR+FQKIYDRL++ L ERGESF
Sbjct: 216 KRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESF 275
Query: 1377 YQKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAA 1431
Y + ++ L+ LL DDG + ++ G+D +P+ + KSDGGF Y T+DLAA
Sbjct: 276 YNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAA 335
Query: 1432 IRQRI----EEEKADWIVYVTD 1449
IR R + + A ++YVTD
Sbjct: 336 IRYRFGAAPDGDDARRVIYVTD 357
>sp|Q3AGU9|SYR_SYNSC Arginine--tRNA ligase OS=Synechococcus sp. (strain CC9605) GN=argS
PE=3 SV=1
Length = 590
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/592 (42%), Positives = 352/592 (59%), Gaps = 42/592 (7%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
+S+ L A+Q AFPE D + AS E FGDFQ N A+ L K K
Sbjct: 2 LSLSQSLDAQLRAAMQRAFPEADAGLDPQLASASKQE-----FGDFQANGALPLAKPLKQ 56
Query: 532 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
+ IA+ + +L +P+ + + ++A PGF+N+ + ++ +
Sbjct: 57 A---------PRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 107
Query: 592 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
+ GV P ++ V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108 GDERLGV--PAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLN 165
Query: 649 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 706
HVGDWGTQFGMLI HL+ P+ L + + DL AFY+E+KKRFD+DE F+ + V
Sbjct: 166 HVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEV 225
Query: 707 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
V LQ DP KAW ++CD SRR+FQKIYDRL++ L+ERGESFY + ++ L+ L
Sbjct: 226 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDILLSERGESFYNPFLPAVIDGLKAAEL 285
Query: 767 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 817
L DDG + ++ G+D +P+ + KSDGGF Y T+DLAAIR R E + A +
Sbjct: 286 LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPEGDGARRV 345
Query: 818 VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
VYVTD GQ HF + + A++AG + P+ R++ V FG+V GED KK KTR+GDTV+L +
Sbjct: 346 VYVTDAGQANHFAGVFQVAERAGWI-PDGARLEHVPFGLVQGEDGKKLKTRAGDTVRLRD 404
Query: 878 LLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDK 935
LLDE + R+ L+ + + E + +E + V +KYADLS NR +Y FSFD+
Sbjct: 405 LLDEAVERAETDLRSRLKEEERSESEEFIQHVAGTVGLAAVKYADLSQNRITNYQFSFDR 464
Query: 936 MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMN 995
ML +GNTA YLLYA RIA IAR G DL AA + + +E+AL + LL+ +
Sbjct: 465 MLALQGNTAPYLLYAVVRIAGIARKGG----DL--AATNAQLQFSEPQEWALVRELLKFD 518
Query: 996 DVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRL 1047
V+ V +L + LC YL+++S F+ FYD ++ D E + RL
Sbjct: 519 AVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLKADPEALASRLALCRL 570
Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/365 (43%), Positives = 220/365 (60%), Gaps = 33/365 (9%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
+S+ L A+Q AFPE D + AS E FGDFQ N A+ L K K
Sbjct: 2 LSLSQSLDAQLRAAMQRAFPEADAGLDPQLASASKQE-----FGDFQANGALPLAKPLKQ 56
Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
+ IA+ + +L +P+ + + ++A PGF+N+ + ++ +
Sbjct: 57 A---------PRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 107
Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
+ GV P ++ V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108 GDERLGV--PAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLN 165
Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 316
HVGDWGTQFGMLI HL+ P+ L + + DL AFY+E+KKRFD+DE F+ + V
Sbjct: 166 HVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEV 225
Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
V LQ DP KAW ++CD SRR+FQKIYDRL++ L+ERGESFY + ++ L+ L
Sbjct: 226 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDILLSERGESFYNPFLPAVIDGLKAAEL 285
Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 427
L DDG + ++ G+D +P+ + KSDGGF Y T+DLAAIR R E + A +
Sbjct: 286 LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPEGDGARRV 345
Query: 428 VYVTD 432
VYVTD
Sbjct: 346 VYVTD 350
Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/365 (43%), Positives = 220/365 (60%), Gaps = 33/365 (9%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELG---DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
+S+ L A+Q AFPE D + AS E FGDFQ N A+ L K K
Sbjct: 2 LSLSQSLDAQLRAAMQRAFPEADAGLDPQLASASKQE-----FGDFQANGALPLAKPLKQ 56
Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
+ IA+ + +L +P+ + + ++A PGF+N+ + ++ +
Sbjct: 57 A---------PRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 107
Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
+ GV P ++ V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108 GDERLGV--PAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLN 165
Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
HVGDWGTQFGMLI HL+ P+ L + + DL AFY+E+KKRFD+DE F+ + V
Sbjct: 166 HVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLVAFYREAKKRFDDDEAFQSTSRDEV 225
Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
V LQ DP KAW ++CD SRR+FQKIYDRL++ L+ERGESFY + ++ L+ L
Sbjct: 226 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDILLSERGESFYNPFLPAVIDGLKAAEL 285
Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 1444
L DDG + ++ G+D +P+ + KSDGGF Y T+DLAAIR R E + A +
Sbjct: 286 LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPEGDGARRV 345
Query: 1445 VYVTD 1449
VYVTD
Sbjct: 346 VYVTD 350
>sp|Q0I6R7|SYR_SYNS3 Arginine--tRNA ligase OS=Synechococcus sp. (strain CC9311) GN=argS
PE=3 SV=1
Length = 590
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/615 (41%), Positives = 360/615 (58%), Gaps = 51/615 (8%)
Query: 475 MSVRDYLSDVFTHAVQVAFPE---LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
+ + L A+Q AFP+ L D + A+ E FGDFQ N A+ L K K
Sbjct: 2 LRIAQALDTQLREAMQRAFPDVDALLDPQLAPANKPE-----FGDFQANGALPLAKPLKQ 56
Query: 532 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
+ IA + L +P+ A + + ++A PGF+N+ + ++ +
Sbjct: 57 A---------PRLIAGAIVEALQADPAFAALCLEPQIAGPGFINLTIRPERLAAEVSARL 107
Query: 592 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
+ GV P + V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108 GDPRLGV--PEVQSDAAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLN 165
Query: 649 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 706
HVGDWGTQFGMLI HL+ P+ L ++ + DL AFY+E+KKRFDEDE F+ + + V
Sbjct: 166 HVGDWGTQFGMLITHLKQVAPETLNRADAVDLGDLVAFYREAKKRFDEDEAFQATSREEV 225
Query: 707 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
V LQ DP KAW ++CD SRR+FQKIYDRL++ L+ERGESFY ++ ++ L++ L
Sbjct: 226 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKEADL 285
Query: 767 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 817
L DDG + ++ G+D +P+ + KSDGGF Y T+DLAAIR R + + A +
Sbjct: 286 LVTDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFALAPDGDGARRV 345
Query: 818 VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
+YVTD GQ HF + + AK+A + P R++ V FG+V GED KK KTRSGDTV+L +
Sbjct: 346 IYVTDAGQANHFAGVFQVAKRANWI-PEHGRLEHVPFGLVQGEDGKKLKTRSGDTVRLRD 404
Query: 878 LLDEGLRRSLDKLKDKNRHTELTPTE----LSEAQQAVAYGCIKYADLSHNRNLDYVFSF 933
LLDE + R+ L + R E +E + V +KYADLS NR +Y FSF
Sbjct: 405 LLDEAVERAEADL--RRRLEEEGRSEDDQFIEHVAGTVGLAAVKYADLSQNRITNYQFSF 462
Query: 934 DKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLR 993
D+ML +GNTA YLLYA RIA IAR G DL A++ + +E++L + LL+
Sbjct: 463 DRMLALQGNTAPYLLYAVVRIAGIARKGG----DLE--AEAGMLQFSEPQEWSLVRELLK 516
Query: 994 MNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEAT 1053
+ V+ V +L + LC YL+++S F+ FYD ++ AEG+ RL L T
Sbjct: 517 FDAVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLK--AEGQ---SLPSRLALCRLT 571
Query: 1054 AKVMKKCFDILNIRT 1068
A +K +L I T
Sbjct: 572 ADTLKSGLGLLGIAT 586
Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 222/365 (60%), Gaps = 33/365 (9%)
Query: 85 MSVRDYLSDVFTHAVQVAFPE---LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
+ + L A+Q AFP+ L D + A+ E FGDFQ N A+ L K K
Sbjct: 2 LRIAQALDTQLREAMQRAFPDVDALLDPQLAPANKPE-----FGDFQANGALPLAKPLKQ 56
Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
+ IA + L +P+ A + + ++A PGF+N+ + ++ +
Sbjct: 57 A---------PRLIAGAIVEALQADPAFAALCLEPQIAGPGFINLTIRPERLAAEVSARL 107
Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
+ GV P + V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108 GDPRLGV--PEVQSDAAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLN 165
Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 316
HVGDWGTQFGMLI HL+ P+ L ++ + DL AFY+E+KKRFDEDE F+ + + V
Sbjct: 166 HVGDWGTQFGMLITHLKQVAPETLNRADAVDLGDLVAFYREAKKRFDEDEAFQATSREEV 225
Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
V LQ DP KAW ++CD SRR+FQKIYDRL++ L+ERGESFY ++ ++ L++ L
Sbjct: 226 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKEADL 285
Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 427
L DDG + ++ G+D +P+ + KSDGGF Y T+DLAAIR R + + A +
Sbjct: 286 LVTDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFALAPDGDGARRV 345
Query: 428 VYVTD 432
+YVTD
Sbjct: 346 IYVTD 350
Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 222/365 (60%), Gaps = 33/365 (9%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPE---LGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
+ + L A+Q AFP+ L D + A+ E FGDFQ N A+ L K K
Sbjct: 2 LRIAQALDTQLREAMQRAFPDVDALLDPQLAPANKPE-----FGDFQANGALPLAKPLKQ 56
Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
+ IA + L +P+ A + + ++A PGF+N+ + ++ +
Sbjct: 57 A---------PRLIAGAIVEALQADPAFAALCLEPQIAGPGFINLTIRPERLAAEVSARL 107
Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
+ GV P + V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 108 GDPRLGV--PEVQSDAAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLN 165
Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
HVGDWGTQFGMLI HL+ P+ L ++ + DL AFY+E+KKRFDEDE F+ + + V
Sbjct: 166 HVGDWGTQFGMLITHLKQVAPETLNRADAVDLGDLVAFYREAKKRFDEDEAFQATSREEV 225
Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
V LQ DP KAW ++CD SRR+FQKIYDRL++ L+ERGESFY ++ ++ L++ L
Sbjct: 226 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKEADL 285
Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 1444
L DDG + ++ G+D +P+ + KSDGGF Y T+DLAAIR R + + A +
Sbjct: 286 LVTDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFALAPDGDGARRV 345
Query: 1445 VYVTD 1449
+YVTD
Sbjct: 346 IYVTD 350
>sp|Q824H4|SYR_CHLCV Arginine--tRNA ligase OS=Chlamydophila caviae (strain GPIC) GN=argS
PE=3 SV=1
Length = 564
Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/594 (40%), Positives = 352/594 (59%), Gaps = 36/594 (6%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
M++ YLS + A AFP++ + + + +++ FG +QCNDAM L + K
Sbjct: 3 MTLLSYLSSLCREATLSAFPQIDTFSPDITQSTKEH---FGHYQCNDAMKLARTLK---- 55
Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 594
P IA++I + + E+ T+ IE+A GF+N S+ + +K
Sbjct: 56 -MAPRAIAEAIVNHIPKEIFTS---------IEIAGAGFINFTFSKEFLNNSLKTFSEEL 105
Query: 595 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 654
+ +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+ ++G+DV RLNH+GDWG
Sbjct: 106 SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFAFVGNDVSRLNHIGDWG 165
Query: 655 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 714
T FGMLI +LQ++ + + + DL YK++ RF ED FKKR+ VVALQ DP
Sbjct: 166 TAFGMLITYLQEEPSEDIEN---LEDLTVLYKKAHARFAEDAEFKKRSQTNVVALQAGDP 222
Query: 715 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 774
K W+ IC +S R FQKIY+ L++ + +RGESFY + +++ LE K L+ + D K
Sbjct: 223 SALKLWKQICAISERAFQKIYNILDIAIEKRGESFYNPFLPEIIQDLENKNLITISDNAK 282
Query: 775 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEE 834
++ E SIP+ + KSDGG+ Y T+DLAA+R R+ + AD I+ VTD+GQ +HF+LLE
Sbjct: 283 CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVNNDGADKIIIVTDMGQSLHFQLLEA 341
Query: 835 CAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
A AG L PNK VGFG+VL + KKFKTRSG+ +KL ELLD + ++ LK+
Sbjct: 342 TALAAGYL-PNKETFSHVGFGLVLDSEGKKFKTRSGENIKLKELLDTAIDQAKATLKE-- 398
Query: 895 RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
E++ E+S + IKYADLS +R DY+FSF+KML GNTA++LLYAY RI
Sbjct: 399 HRPEISDEEISSRAPILGINAIKYADLSSHRVSDYIFSFEKMLRFEGNTAMFLLYAYVRI 458
Query: 955 ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
I R GI + DL ++TP +++ E ALA LLR + + L +DLC H L +YL
Sbjct: 459 QGIKRRLGIETLDL----EATP-NIQEPSEEALALALLRFPEAIDLTLKDLCPHFLTDYL 513
Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
Y ++ F+ F+ +C+ IE + K RL L K + +L ++T
Sbjct: 514 YMLTNKFNAFFRDCH-IEGSSHQK------ERLYLCALVEKTLAAGMHLLGLQT 560
Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 218/362 (60%), Gaps = 23/362 (6%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
M++ YLS + A AFP++ + + + +++ FG +QCNDAM L + K
Sbjct: 3 MTLLSYLSSLCREATLSAFPQIDTFSPDITQSTKEH---FGHYQCNDAMKLARTLK---- 55
Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 204
P IA++I + + E+ T+ IE+A GF+N S+ + +K
Sbjct: 56 -MAPRAIAEAIVNHIPKEIFTS---------IEIAGAGFINFTFSKEFLNNSLKTFSEEL 105
Query: 205 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 264
+ +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+ ++G+DV RLNH+GDWG
Sbjct: 106 SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFAFVGNDVSRLNHIGDWG 165
Query: 265 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 324
T FGMLI +LQ++ + + + DL YK++ RF ED FKKR+ VVALQ DP
Sbjct: 166 TAFGMLITYLQEEPSEDIEN---LEDLTVLYKKAHARFAEDAEFKKRSQTNVVALQAGDP 222
Query: 325 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 384
K W+ IC +S R FQKIY+ L++ + +RGESFY + +++ LE K L+ + D K
Sbjct: 223 SALKLWKQICAISERAFQKIYNILDIAIEKRGESFYNPFLPEIIQDLENKNLITISDNAK 282
Query: 385 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQA 442
++ E SIP+ + KSDGG+ Y T+DLAA+R R+ + AD I+ VTD +S H Q+L+A
Sbjct: 283 CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVNNDGADKIIIVTDMGQSLHFQLLEA 341
Query: 443 IA 444
A
Sbjct: 342 TA 343
Score = 264 bits (675), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 209/348 (60%), Gaps = 21/348 (6%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
M++ YLS + A AFP++ + + + +++ FG +QCNDAM L + K
Sbjct: 3 MTLLSYLSSLCREATLSAFPQIDTFSPDITQSTKEH---FGHYQCNDAMKLARTLK---- 55
Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNG 1221
P IA++I + + E+ T+ IE+A GF+N S+ + +K
Sbjct: 56 -MAPRAIAEAIVNHIPKEIFTS---------IEIAGAGFINFTFSKEFLNNSLKTFSEEL 105
Query: 1222 VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWG 1281
+ +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+ ++G+DV RLNH+GDWG
Sbjct: 106 SSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFAFVGNDVSRLNHIGDWG 165
Query: 1282 TQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDP 1341
T FGMLI +LQ++ + + + DL YK++ RF ED FKKR+ VVALQ DP
Sbjct: 166 TAFGMLITYLQEEPSEDIEN---LEDLTVLYKKAHARFAEDAEFKKRSQTNVVALQAGDP 222
Query: 1342 DYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRK 1401
K W+ IC +S R FQKIY+ L++ + +RGESFY + +++ LE K L+ + D K
Sbjct: 223 SALKLWKQICAISERAFQKIYNILDIAIEKRGESFYNPFLPEIIQDLENKNLITISDNAK 282
Query: 1402 IMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
++ E SIP+ + KSDGG+ Y T+DLAA+R R+ + AD I+ VTD
Sbjct: 283 CVFHEGF-SIPLMVQKSDGGYNYATTDLAAMRYRVNNDGADKIIIVTD 329
>sp|A5GW85|SYR_SYNR3 Arginine--tRNA ligase OS=Synechococcus sp. (strain RCC307) GN=argS
PE=3 SV=1
Length = 590
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/597 (41%), Positives = 351/597 (58%), Gaps = 45/597 (7%)
Query: 488 AVQVAFPEL-GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 546
A+Q AFPE G+ ++ ++ +FGDFQ N A+AL K K + IA
Sbjct: 15 AMQQAFPEADGELNPALGPASKP---EFGDFQANGALALAKPLKQA---------PRQIA 62
Query: 547 SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN----- 601
+ + +L NP + + + ++A PGF+N+ L +++ I + P L
Sbjct: 63 AAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVLAAEVRQRIGD----PRLGVAAVE 118
Query: 602 -KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 660
+ V+VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ GH V+RLNHVGDWGTQFGML
Sbjct: 119 QAEAPVIVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGHQVLRLNHVGDWGTQFGML 178
Query: 661 IAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 718
I HL+ P+ L + I DL AFY+E+KKRFD+DE F+ + + VV LQ D K
Sbjct: 179 ITHLKQVAPEALNTADAIDLGDLVAFYREAKKRFDDDEAFQTTSREEVVKLQGGDATSLK 238
Query: 719 AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW- 777
AW ++CD SRR+FQKIYDRL++ L ERGESFY + +V L GLL D+G ++
Sbjct: 239 AWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPQLAAVVDDLRSSGLLVTDEGAGCVFL 298
Query: 778 ----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE--EKADWIVYVTDLGQGVHFRL 831
G++ +P+ + KSDGGF Y T+DLAAIR R+ + A ++YVTD GQ HF
Sbjct: 299 EGVVGKEGKPLPLIVQKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTDAGQAAHFAG 358
Query: 832 LEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLK 891
+ + AK+AG + P ++ V FG+V G+D KK KTR+GDTV+L +LLDE + R+ L+
Sbjct: 359 VFQVAKRAGWV-PAAASLEHVPFGLVQGDDGKKLKTRAGDTVRLKDLLDEAVERAQADLR 417
Query: 892 DKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
+ E +E + + V +KYADLS NR +Y FSF++ML GNTA YLLY
Sbjct: 418 RRLEEEERQESESFIDQVATTVGLAAVKYADLSTNRITNYQFSFERMLALTGNTAPYLLY 477
Query: 950 AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
A RI+ IAR G +L + E +E+AL + LL+++ V+ V DL +
Sbjct: 478 AVVRISGIARKGGALDGEL-----PERLVFEEPQEWALIRQLLQLDAVISEVESDLLPNR 532
Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
LC YL+++S +F+ FYD ++ D + + + RL L A +K +L I
Sbjct: 533 LCTYLFELSQSFNRFYDQVPVLKAD-----EPMRSSRLALCRLAADTLKLGLSLLGI 584
Score = 287 bits (734), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/351 (44%), Positives = 215/351 (61%), Gaps = 32/351 (9%)
Query: 98 AVQVAFPEL-GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 156
A+Q AFPE G+ ++ ++ +FGDFQ N A+AL K K + IA
Sbjct: 15 AMQQAFPEADGELNPALGPASKP---EFGDFQANGALALAKPLKQA---------PRQIA 62
Query: 157 SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN----- 211
+ + +L NP + + + ++A PGF+N+ L +++ I + P L
Sbjct: 63 AAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVLAAEVRQRIGD----PRLGVAAVE 118
Query: 212 -KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 270
+ V+VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ GH V+RLNHVGDWGTQFGML
Sbjct: 119 QAEAPVIVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGHQVLRLNHVGDWGTQFGML 178
Query: 271 IAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 328
I HL+ P+ L + I DL AFY+E+KKRFD+DE F+ + + VV LQ D K
Sbjct: 179 ITHLKQVAPEALNTADAIDLGDLVAFYREAKKRFDDDEAFQTTSREEVVKLQGGDATSLK 238
Query: 329 AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW- 387
AW ++CD SRR+FQKIYDRL++ L ERGESFY + +V L GLL D+G ++
Sbjct: 239 AWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPQLAAVVDDLRSSGLLVTDEGAGCVFL 298
Query: 388 ----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE--EKADWIVYVTD 432
G++ +P+ + KSDGGF Y T+DLAAIR R+ + A ++YVTD
Sbjct: 299 EGVVGKEGKPLPLIVQKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTD 349
Score = 287 bits (734), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/351 (44%), Positives = 215/351 (61%), Gaps = 32/351 (9%)
Query: 1115 AVQVAFPEL-GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIA 1173
A+Q AFPE G+ ++ ++ +FGDFQ N A+AL K K + IA
Sbjct: 15 AMQQAFPEADGELNPALGPASKP---EFGDFQANGALALAKPLKQA---------PRQIA 62
Query: 1174 SVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLN----- 1228
+ + +L NP + + + ++A PGF+N+ L +++ I + P L
Sbjct: 63 AAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVLAAEVRQRIGD----PRLGVAAVE 118
Query: 1229 -KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGML 1287
+ V+VDFSSPNIAKEMHVGHLRSTIIGD ++R+LE+ GH V+RLNHVGDWGTQFGML
Sbjct: 119 QAEAPVIVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGHQVLRLNHVGDWGTQFGML 178
Query: 1288 IAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKK 1345
I HL+ P+ L + I DL AFY+E+KKRFD+DE F+ + + VV LQ D K
Sbjct: 179 ITHLKQVAPEALNTADAIDLGDLVAFYREAKKRFDDDEAFQTTSREEVVKLQGGDATSLK 238
Query: 1346 AWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW- 1404
AW ++CD SRR+FQKIYDRL++ L ERGESFY + +V L GLL D+G ++
Sbjct: 239 AWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPQLAAVVDDLRSSGLLVTDEGAGCVFL 298
Query: 1405 ----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE--EKADWIVYVTD 1449
G++ +P+ + KSDGGF Y T+DLAAIR R+ + A ++YVTD
Sbjct: 299 EGVVGKEGKPLPLIVQKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTD 349
>sp|Q9Z7Y3|SYR_CHLPN Arginine--tRNA ligase OS=Chlamydia pneumoniae GN=argS PE=3 SV=1
Length = 561
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 250/591 (42%), Positives = 350/591 (59%), Gaps = 44/591 (7%)
Query: 481 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 540
LS + + A+ AFP L D + + +++ FG +QCNDAM L ++ K K P
Sbjct: 8 LSVICSQAIAKAFPNLEDWAPEITPSTKEH---FGHYQCNDAMKLARVLK-----KAP-- 57
Query: 541 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---KDIIVNGVQP 597
++IA + +EL P IE+A GF+N S V+ +Q+ KD + G Q
Sbjct: 58 --RAIAEAIVAELPQEP-----FSLIEIAGAGFINFTFSPVFLNQQLEHFKDALKLGFQ- 109
Query: 598 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 657
+++ ++++DFSSPNIAK+MHVGHLRSTIIGD+++R+ Y+GHDV+RLNH+GDWGT F
Sbjct: 110 --VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAF 167
Query: 658 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 717
GMLI +LQ+ DY + DL + YK++ F DE FKKR+ Q VVALQ DP
Sbjct: 168 GMLITYLQENPCDY----SDLEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAI 223
Query: 718 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 777
WE IC+ S + FQKIYD L++ + +RGESFY + +++ LEKKGLL + + K ++
Sbjct: 224 AIWEKICETSEKAFQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVF 283
Query: 778 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAK 837
E SIP + KSDGG+ Y T+DLAA+R RIEE+ AD I+ VTDLGQ +HF+LLE A
Sbjct: 284 HE-AFSIPFMVQKSDGGYNYATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAI 342
Query: 838 KAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT 897
AG L P VGFG+VL KK KTRSG+ VKL ELLD + ++ + L++
Sbjct: 343 AAGYLQPGI--FSHVGFGLVLDPQGKKLKTRSGENVKLRELLDTAIEKAEEALRE--HRP 398
Query: 898 ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASI 957
ELT + E + IKY+DLS +R DYVFSF+KML GNTA++LLYAY RI I
Sbjct: 399 ELTDEAIQERAPVIGINAIKYSDLSSHRTSDYVFSFEKMLRFEGNTAMFLLYAYVRIQGI 458
Query: 958 ARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017
R GI+ L P ++ E LA TLLR + L ++LC H L +YLY++
Sbjct: 459 KRRLGISQLSLE-----GPPEIQEPAEELLALTLLRFPEALESTIKELCPHFLTDYLYNL 513
Query: 1018 STAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
+ F+ F+ +D+ + RL L +V+ +L ++T
Sbjct: 514 THKFNGFF-------RDSHIQDSPYAKSRLFLCALAEQVLATGMHLLGLKT 557
Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 227/359 (63%), Gaps = 30/359 (8%)
Query: 91 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 150
LS + + A+ AFP L D + + +++ FG +QCNDAM L ++ K K P
Sbjct: 8 LSVICSQAIAKAFPNLEDWAPEITPSTKEH---FGHYQCNDAMKLARVLK-----KAP-- 57
Query: 151 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---KDIIVNGVQP 207
++IA + +EL P IE+A GF+N S V+ +Q+ KD + G Q
Sbjct: 58 --RAIAEAIVAELPQEP-----FSLIEIAGAGFINFTFSPVFLNQQLEHFKDALKLGFQ- 109
Query: 208 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 267
+++ ++++DFSSPNIAK+MHVGHLRSTIIGD+++R+ Y+GHDV+RLNH+GDWGT F
Sbjct: 110 --VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAF 167
Query: 268 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 327
GMLI +LQ+ DY + DL + YK++ F DE FKKR+ Q VVALQ DP
Sbjct: 168 GMLITYLQENPCDY----SDLEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAI 223
Query: 328 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 387
WE IC+ S + FQKIYD L++ + +RGESFY + +++ LEKKGLL + + K ++
Sbjct: 224 AIWEKICETSEKAFQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVF 283
Query: 388 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD-HRSYH-QVLQAIA 444
E SIP + KSDGG+ Y T+DLAA+R RIEE+ AD I+ VTD +S H Q+L+A A
Sbjct: 284 HE-AFSIPFMVQKSDGGYNYATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATA 341
Score = 285 bits (730), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 218/345 (63%), Gaps = 28/345 (8%)
Query: 1108 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFD 1167
LS + + A+ AFP L D + + +++ FG +QCNDAM L ++ K K P
Sbjct: 8 LSVICSQAIAKAFPNLEDWAPEITPSTKEH---FGHYQCNDAMKLARVLK-----KAP-- 57
Query: 1168 IAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI---KDIIVNGVQP 1224
++IA + +EL P IE+A GF+N S V+ +Q+ KD + G Q
Sbjct: 58 --RAIAEAIVAELPQEP-----FSLIEIAGAGFINFTFSPVFLNQQLEHFKDALKLGFQ- 109
Query: 1225 PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQF 1284
+++ ++++DFSSPNIAK+MHVGHLRSTIIGD+++R+ Y+GHDV+RLNH+GDWGT F
Sbjct: 110 --VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAF 167
Query: 1285 GMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYK 1344
GMLI +LQ+ DY + DL + YK++ F DE FKKR+ Q VVALQ DP
Sbjct: 168 GMLITYLQENPCDY----SDLEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAI 223
Query: 1345 KAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMW 1404
WE IC+ S + FQKIYD L++ + +RGESFY + +++ LEKKGLL + + K ++
Sbjct: 224 AIWEKICETSEKAFQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVF 283
Query: 1405 GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
E SIP + KSDGG+ Y T+DLAA+R RIEE+ AD I+ VTD
Sbjct: 284 HE-AFSIPFMVQKSDGGYNYATTDLAAMRYRIEEDHADKIIIVTD 327
>sp|Q5L6U4|SYR_CHLAB Arginine--tRNA ligase OS=Chlamydophila abortus (strain S26/3) GN=argS
PE=3 SV=1
Length = 562
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/599 (41%), Positives = 355/599 (59%), Gaps = 46/599 (7%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
M++ YLS + A+ AFP++ + + + ++ FG +QCNDAM L + K
Sbjct: 1 MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53
Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---I 591
P IA+SI ++ IE+A GF+N S+ + ++ +
Sbjct: 54 -MPPRAIAESIVKQISK---------NNFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDL 103
Query: 592 VNG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 649
+G VQ P +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+ ++GHDV+RLNH
Sbjct: 104 SSGFRVQDPK-----KVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNH 158
Query: 650 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 709
+GDWGT FGMLI +LQ++ + + + DL YK++ RF ED FKKR+ VVAL
Sbjct: 159 IGDWGTAFGMLITYLQEESSEDIES---LEDLTILYKKAHVRFAEDAEFKKRSQTNVVAL 215
Query: 710 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 769
Q DP +K WE IC++S R FQKIY+ L++ + +RGESFY + +++ LEKK L+ +
Sbjct: 216 QSGDPKARKLWERICEISERAFQKIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITV 275
Query: 770 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHF 829
D K ++ E SIP+ + K DGG+ Y T+DLAA+R R+E++ AD I+ VTD+GQ +HF
Sbjct: 276 SDEAKCVFHEG-FSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHF 334
Query: 830 RLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDK 889
+LLE A AG L PNK VGFG+VL + KKFKTRSG+ +KL ELLD + +++
Sbjct: 335 QLLEATALAAGYL-PNKDVFSHVGFGLVLDSEGKKFKTRSGENIKLQELLDTAIDQAVAT 393
Query: 890 LKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLY 949
LK K+R E++ E++E + IKYADLS +R DYVFSF+KML GNTA+++LY
Sbjct: 394 LK-KHR-PEMSDAEITERAPVLGMNAIKYADLSSHRVSDYVFSFEKMLRFEGNTAMFILY 451
Query: 950 AYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH 1009
Y RI I R GI L AA +++ E ALA LLR + + + ++LC H
Sbjct: 452 GYVRIQGIKRRLGIEKLSLESAA-----NIQEPSEEALALALLRFPEAIDITLKELCPHF 506
Query: 1010 LCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
L +YLY ++ F F+ +C+ IE K RL L K + +L ++T
Sbjct: 507 LTDYLYMLTNKFHAFFRDCH-IEGSPHQK------ERLYLCALVEKTLATGMHLLGLQT 558
Score = 271 bits (692), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 224/367 (61%), Gaps = 33/367 (8%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
M++ YLS + A+ AFP++ + + + ++ FG +QCNDAM L + K
Sbjct: 1 MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53
Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---I 201
P IA+SI ++ IE+A GF+N S+ + ++ +
Sbjct: 54 -MPPRAIAESIVKQISK---------NNFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDL 103
Query: 202 VNG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 259
+G VQ P +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+ ++GHDV+RLNH
Sbjct: 104 SSGFRVQDPK-----KVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNH 158
Query: 260 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 319
+GDWGT FGMLI +LQ++ + + + DL YK++ RF ED FKKR+ VVAL
Sbjct: 159 IGDWGTAFGMLITYLQEESSEDIES---LEDLTILYKKAHVRFAEDAEFKKRSQTNVVAL 215
Query: 320 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 379
Q DP +K WE IC++S R FQKIY+ L++ + +RGESFY + +++ LEKK L+ +
Sbjct: 216 QSGDPKARKLWERICEISERAFQKIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITV 275
Query: 380 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH- 437
D K ++ E SIP+ + K DGG+ Y T+DLAA+R R+E++ AD I+ VTD +S H
Sbjct: 276 SDEAKCVFHEG-FSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHF 334
Query: 438 QVLQAIA 444
Q+L+A A
Sbjct: 335 QLLEATA 341
Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 215/353 (60%), Gaps = 31/353 (8%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
M++ YLS + A+ AFP++ + + + ++ FG +QCNDAM L + K
Sbjct: 1 MTLLSYLSSLCREAILSAFPQIETISPDITQSTKEL---FGHYQCNDAMKLARTLK---- 53
Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI---I 1218
P IA+SI ++ IE+A GF+N S+ + ++ +
Sbjct: 54 -MPPRAIAESIVKQISK---------NNFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDL 103
Query: 1219 VNG--VQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNH 1276
+G VQ P +V++DFSSPNIAK+MHVGHLRSTIIGD ++R+ ++GHDV+RLNH
Sbjct: 104 SSGFRVQDPK-----KVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNH 158
Query: 1277 VGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVAL 1336
+GDWGT FGMLI +LQ++ + + + DL YK++ RF ED FKKR+ VVAL
Sbjct: 159 IGDWGTAFGMLITYLQEESSEDIES---LEDLTILYKKAHVRFAEDAEFKKRSQTNVVAL 215
Query: 1337 QRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLEL 1396
Q DP +K WE IC++S R FQKIY+ L++ + +RGESFY + +++ LEKK L+ +
Sbjct: 216 QSGDPKARKLWERICEISERAFQKIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITV 275
Query: 1397 DDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
D K ++ E SIP+ + K DGG+ Y T+DLAA+R R+E++ AD I+ VTD
Sbjct: 276 SDEAKCVFHEG-FSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVTD 327
>sp|Q9PJT8|SYR_CHLMU Arginine--tRNA ligase OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=argS PE=3 SV=1
Length = 563
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/593 (40%), Positives = 349/593 (58%), Gaps = 36/593 (6%)
Query: 476 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 535
++ +L+ + + A++ AFPEL + T + + +++ FG +QCNDAM L + +
Sbjct: 3 TLLSFLTSLCSSAIRQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARALR----- 54
Query: 536 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 595
K+P IA+ I + + A IE+A GF+N S+ + Q++
Sbjct: 55 KSPRAIAEEIVAHIP---------ATPFSSIEIAGAGFINFTFSKEFLANQLQIFSQELA 105
Query: 596 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
+ ++ +V++DFSSPNIAK+MHVGHLRSTIIGD ++R ++GHDV+RLNH+GDWGT
Sbjct: 106 KGFPVSSPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGT 165
Query: 656 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
FGMLI +LQ+ T + +L YK++ RF ED FKKR+ VVALQ DP
Sbjct: 166 AFGMLITYLQETAQ---TDIHQLENLTELYKKAHVRFAEDPEFKKRSQYNVVALQSGDPQ 222
Query: 716 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
W+ IC VS + FQKIY L+V L RGESFY + +V LE K L+ L DG K
Sbjct: 223 ALALWKQICAVSEKSFQKIYSILDVELHTRGESFYNPFLADVVSDLESKNLVTLSDGAKC 282
Query: 776 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
++ E+ SIP+ I KSDGG+ Y T+D+AA+R RI+++ AD I+ VTD GQ +HF+LLE
Sbjct: 283 VFHEEF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDHADRILIVTDSGQSLHFQLLEAT 341
Query: 836 AKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNR 895
AG L P+K VGFG+VL +KFKTRSG+ +KL ELLD + ++ + L++
Sbjct: 342 CLAAGYL-PHKGIFSHVGFGLVLDTQGRKFKTRSGENIKLQELLDTAIEKAKESLREHR- 399
Query: 896 HTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIA 955
E++ EL+ + IKYADLS +R DYVFSF+KML GNTA+ LLYAY RI
Sbjct: 400 -PEISEEELAYQGPILGINAIKYADLSAHRINDYVFSFEKMLRFEGNTAMSLLYAYVRIQ 458
Query: 956 SIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLY 1015
I R +++ Q P+S+ E LA TLLR +VL L R+LC H L +YLY
Sbjct: 459 GIKRRMKLDT-----LPQKGPLSIHEPAEETLALTLLRFPEVLDLTLRELCPHFLTDYLY 513
Query: 1016 DISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
++ F+ F+ +C+ D + + RL L T K ++ +L ++T
Sbjct: 514 VLTNKFNAFFRDCHIEGSDYQQE-------RLYLCGLTEKTLETGMHLLGLKT 559
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 219/359 (61%), Gaps = 23/359 (6%)
Query: 86 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 145
++ +L+ + + A++ AFPEL + T + + +++ FG +QCNDAM L + +
Sbjct: 3 TLLSFLTSLCSSAIRQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARALR----- 54
Query: 146 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 205
K+P IA+ I + + A IE+A GF+N S+ + Q++
Sbjct: 55 KSPRAIAEEIVAHIP---------ATPFSSIEIAGAGFINFTFSKEFLANQLQIFSQELA 105
Query: 206 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
+ ++ +V++DFSSPNIAK+MHVGHLRSTIIGD ++R ++GHDV+RLNH+GDWGT
Sbjct: 106 KGFPVSSPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGT 165
Query: 266 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 325
FGMLI +LQ+ T + +L YK++ RF ED FKKR+ VVALQ DP
Sbjct: 166 AFGMLITYLQETAQ---TDIHQLENLTELYKKAHVRFAEDPEFKKRSQYNVVALQSGDPQ 222
Query: 326 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 385
W+ IC VS + FQKIY L+V L RGESFY + +V LE K L+ L DG K
Sbjct: 223 ALALWKQICAVSEKSFQKIYSILDVELHTRGESFYNPFLADVVSDLESKNLVTLSDGAKC 282
Query: 386 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH-RSYH-QVLQA 442
++ E+ SIP+ I KSDGG+ Y T+D+AA+R RI+++ AD I+ VTD +S H Q+L+A
Sbjct: 283 VFHEEF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDHADRILIVTDSGQSLHFQLLEA 340
Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 211/347 (60%), Gaps = 21/347 (6%)
Query: 1103 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 1162
++ +L+ + + A++ AFPEL + T + + +++ FG +QCNDAM L + +
Sbjct: 3 TLLSFLTSLCSSAIRQAFPELEELTLDITPSTKEH---FGHYQCNDAMKLARALR----- 54
Query: 1163 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 1222
K+P IA+ I + + A IE+A GF+N S+ + Q++
Sbjct: 55 KSPRAIAEEIVAHIP---------ATPFSSIEIAGAGFINFTFSKEFLANQLQIFSQELA 105
Query: 1223 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
+ ++ +V++DFSSPNIAK+MHVGHLRSTIIGD ++R ++GHDV+RLNH+GDWGT
Sbjct: 106 KGFPVSSPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGT 165
Query: 1283 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 1342
FGMLI +LQ+ T + +L YK++ RF ED FKKR+ VVALQ DP
Sbjct: 166 AFGMLITYLQETAQ---TDIHQLENLTELYKKAHVRFAEDPEFKKRSQYNVVALQSGDPQ 222
Query: 1343 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 1402
W+ IC VS + FQKIY L+V L RGESFY + +V LE K L+ L DG K
Sbjct: 223 ALALWKQICAVSEKSFQKIYSILDVELHTRGESFYNPFLADVVSDLESKNLVTLSDGAKC 282
Query: 1403 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
++ E+ SIP+ I KSDGG+ Y T+D+AA+R RI+++ AD I+ VTD
Sbjct: 283 VFHEEF-SIPLMIQKSDGGYNYATTDVAAMRYRIQQDHADRILIVTD 328
>sp|Q7U3V8|SYR_SYNPX Arginine--tRNA ligase OS=Synechococcus sp. (strain WH8102) GN=argS
PE=3 SV=1
Length = 597
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/592 (41%), Positives = 351/592 (59%), Gaps = 42/592 (7%)
Query: 475 MSVRDYLSDVFTHAVQVAFP---ELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
+S+ + L A+Q AFP + D + AS E FGDFQ N A+ L K K
Sbjct: 9 LSLSNTLDAQLRAAMQRAFPVADAVLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 63
Query: 532 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
+ IA+ + +L + + + ++A PGF+N+ + ++ +
Sbjct: 64 A---------PRQIATAIVEQLQADSGFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 114
Query: 592 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
+ GV P + + V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 115 GDERLGV--PAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHTVLRLN 172
Query: 649 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 706
HVGDWGTQFGMLI HL+ PD L + + DL AFY+E+KKRFD+DE F+ + + V
Sbjct: 173 HVGDWGTQFGMLITHLKQVAPDALETADAVDLGDLVAFYREAKKRFDDDEAFQSTSREEV 232
Query: 707 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 766
V LQ DP KAW ++CD SRR+FQKIYDRL++ L ERGESFY + ++ L+ L
Sbjct: 233 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPFLPAVIDGLKAAEL 292
Query: 767 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 817
L DDG + ++ G+D +P+ + KSDGGF Y T+DLAAIR R + + A +
Sbjct: 293 LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGARRV 352
Query: 818 VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
VYVTD GQ HF + + A++AG + P+ R++ V FG+V GED KK KTR+GDTV+L +
Sbjct: 353 VYVTDAGQANHFAGVFQVAERAGWI-PDGARLEHVPFGLVQGEDGKKLKTRAGDTVRLRD 411
Query: 878 LLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDK 935
LLDE + R+ L+ + + E + +E + V +KYADLS NR +Y FSFD+
Sbjct: 412 LLDEAVERAETDLRSRLKEEERSESEEFIQNVAGTVGLAAVKYADLSQNRITNYQFSFDR 471
Query: 936 MLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMN 995
ML +GNTA YLLYA RIA IAR G DL V+ + + +E+AL + LL+ +
Sbjct: 472 MLALQGNTAPYLLYAVVRIAGIARKGG----DLEVS--TGQLQFSEPQEWALVRELLKFD 525
Query: 996 DVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRL 1047
V+ V +L + LC YL+++S F+ FYD ++ D E + RL
Sbjct: 526 SVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPVLKADPEALASRLALCRL 577
Score = 277 bits (708), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 219/365 (60%), Gaps = 33/365 (9%)
Query: 85 MSVRDYLSDVFTHAVQVAFP---ELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 141
+S+ + L A+Q AFP + D + AS E FGDFQ N A+ L K K
Sbjct: 9 LSLSNTLDAQLRAAMQRAFPVADAVLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 63
Query: 142 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 201
+ IA+ + +L + + + ++A PGF+N+ + ++ +
Sbjct: 64 A---------PRQIATAIVEQLQADSGFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 114
Query: 202 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
+ GV P + + V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 115 GDERLGV--PAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHTVLRLN 172
Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 316
HVGDWGTQFGMLI HL+ PD L + + DL AFY+E+KKRFD+DE F+ + + V
Sbjct: 173 HVGDWGTQFGMLITHLKQVAPDALETADAVDLGDLVAFYREAKKRFDDDEAFQSTSREEV 232
Query: 317 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 376
V LQ DP KAW ++CD SRR+FQKIYDRL++ L ERGESFY + ++ L+ L
Sbjct: 233 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPFLPAVIDGLKAAEL 292
Query: 377 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 427
L DDG + ++ G+D +P+ + KSDGGF Y T+DLAAIR R + + A +
Sbjct: 293 LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGARRV 352
Query: 428 VYVTD 432
VYVTD
Sbjct: 353 VYVTD 357
Score = 277 bits (708), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 219/365 (60%), Gaps = 33/365 (9%)
Query: 1102 MSVRDYLSDVFTHAVQVAFP---ELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 1158
+S+ + L A+Q AFP + D + AS E FGDFQ N A+ L K K
Sbjct: 9 LSLSNTLDAQLRAAMQRAFPVADAVLDPQLAPASKPE-----FGDFQANGALPLAKPLKQ 63
Query: 1159 KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 1218
+ IA+ + +L + + + ++A PGF+N+ + ++ +
Sbjct: 64 A---------PRQIATAIVEQLQADSGFTDLCLEPQIAGPGFINLTIRPERLAAEVSARL 114
Query: 1219 VN---GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
+ GV P + + V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+LE+ GH V+RLN
Sbjct: 115 GDERLGV--PAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHTVLRLN 172
Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCV 1333
HVGDWGTQFGMLI HL+ PD L + + DL AFY+E+KKRFD+DE F+ + + V
Sbjct: 173 HVGDWGTQFGMLITHLKQVAPDALETADAVDLGDLVAFYREAKKRFDDDEAFQSTSREEV 232
Query: 1334 VALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGL 1393
V LQ DP KAW ++CD SRR+FQKIYDRL++ L ERGESFY + ++ L+ L
Sbjct: 233 VKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPFLPAVIDGLKAAEL 292
Query: 1394 LELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI----EEEKADWI 1444
L DDG + ++ G+D +P+ + KSDGGF Y T+DLAAIR R + + A +
Sbjct: 293 LVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGARRV 352
Query: 1445 VYVTD 1449
VYVTD
Sbjct: 353 VYVTD 357
>sp|A9BDF0|SYR_PROM4 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9211)
GN=argS PE=3 SV=1
Length = 603
Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust.
Identities = 250/606 (41%), Positives = 365/606 (60%), Gaps = 46/606 (7%)
Query: 488 AVQVAFPELG-DKTASVASTNEKYVH----KFGDFQCNDAMALCKIFKDKGEKKNPFDIA 542
A++ AFP+ S S N + V +FGDFQ N A+AL KI K K P IA
Sbjct: 15 ALEAAFPQASLVAKQSGQSLNPQLVPATKPEFGDFQVNGALALSKILK-----KAPRKIA 69
Query: 543 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------KDIIVNGVQ 596
+ I +L N K+ K E+A PGF+N+ + +I + V +
Sbjct: 70 EEI----IKQLVKNDDFNKLCLKPEIAGPGFINLTIQNSCLTTEICARLNDDHLGVPIAK 125
Query: 597 PPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 655
P +K L+ ++VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 126 PLKTHKSLKPIVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHPVLRLNHVGDWGT 185
Query: 656 QFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 713
QFGMLI +L+ P+ LT + I DL FY+++KK FDEDE F+ + + VV LQ D
Sbjct: 186 QFGMLITYLKLVAPEALTTANAINLGDLVKFYRQAKKLFDEDETFQDASREEVVRLQNGD 245
Query: 714 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 773
P KAW+++CD SR +F+KIY RL++ +TERGESFY ++++ ++ L+ LL D+G
Sbjct: 246 PQSLKAWQLLCDQSRIEFEKIYKRLDIHITERGESFYNQYLQDVIDDLKSTNLLVTDNGA 305
Query: 774 KIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVYVTDLG 824
K ++ G+D +P+ + K+DGGF Y T+DLAAIR R++ + A ++YVTD G
Sbjct: 306 KCIFLDDITGKDGKPLPLIVQKTDGGFNYATTDLAAIRYRLQAYPQGDGACRLIYVTDAG 365
Query: 825 QGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
Q HF + + A++A + PN R++ V FG+V GED KK KTRSGDTV+L +LLDE +
Sbjct: 366 QASHFFAVFQVARRANWI-PNDCRIEHVPFGLVQGEDGKKLKTRSGDTVRLKDLLDEAII 424
Query: 885 RSLDKLKDK-NRHTELTPTE-LSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
R+ + L+++ N E +++ + + +KYADLS NR +Y FSF++ML +GN
Sbjct: 425 RAKNDLEERLNAEGRKEDQEFINKVSRVIGIAAVKYADLSQNRITNYQFSFNRMLALQGN 484
Query: 943 TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
TA YLLYA RIA I R G + A ++ +E+ LA+ LL+ ++V++ V
Sbjct: 485 TAPYLLYALVRIAGINRKGG------SLNATINKLTFNEPQEWMLARELLKFDEVILQVE 538
Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
+L + LC YL+++S F+ FYD ++ + ++ RL L + TA +K
Sbjct: 539 EELLPNRLCNYLFELSQVFNRFYDQVPVLKAN-----DSLKASRLALCQLTADTIKLGLK 593
Query: 1063 ILNIRT 1068
+L I T
Sbjct: 594 LLGIPT 599
Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 223/358 (62%), Gaps = 32/358 (8%)
Query: 98 AVQVAFPELG-DKTASVASTNEKYVH----KFGDFQCNDAMALCKIFKDKGEKKNPFDIA 152
A++ AFP+ S S N + V +FGDFQ N A+AL KI K K P IA
Sbjct: 15 ALEAAFPQASLVAKQSGQSLNPQLVPATKPEFGDFQVNGALALSKILK-----KAPRKIA 69
Query: 153 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------KDIIVNGVQ 206
+ I +L N K+ K E+A PGF+N+ + +I + V +
Sbjct: 70 EEI----IKQLVKNDDFNKLCLKPEIAGPGFINLTIQNSCLTTEICARLNDDHLGVPIAK 125
Query: 207 PPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 265
P +K L+ ++VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 126 PLKTHKSLKPIVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHPVLRLNHVGDWGT 185
Query: 266 QFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 323
QFGMLI +L+ P+ LT + I DL FY+++KK FDEDE F+ + + VV LQ D
Sbjct: 186 QFGMLITYLKLVAPEALTTANAINLGDLVKFYRQAKKLFDEDETFQDASREEVVRLQNGD 245
Query: 324 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 383
P KAW+++CD SR +F+KIY RL++ +TERGESFY ++++ ++ L+ LL D+G
Sbjct: 246 PQSLKAWQLLCDQSRIEFEKIYKRLDIHITERGESFYNQYLQDVIDDLKSTNLLVTDNGA 305
Query: 384 KIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVYVTD 432
K ++ G+D +P+ + K+DGGF Y T+DLAAIR R++ + A ++YVTD
Sbjct: 306 KCIFLDDITGKDGKPLPLIVQKTDGGFNYATTDLAAIRYRLQAYPQGDGACRLIYVTD 363
Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 223/358 (62%), Gaps = 32/358 (8%)
Query: 1115 AVQVAFPELG-DKTASVASTNEKYVH----KFGDFQCNDAMALCKIFKDKGEKKNPFDIA 1169
A++ AFP+ S S N + V +FGDFQ N A+AL KI K K P IA
Sbjct: 15 ALEAAFPQASLVAKQSGQSLNPQLVPATKPEFGDFQVNGALALSKILK-----KAPRKIA 69
Query: 1170 QSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI------KDIIVNGVQ 1223
+ I +L N K+ K E+A PGF+N+ + +I + V +
Sbjct: 70 EEI----IKQLVKNDDFNKLCLKPEIAGPGFINLTIQNSCLTTEICARLNDDHLGVPIAK 125
Query: 1224 PPTLNKKLR-VLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 1282
P +K L+ ++VDFSSPNIAKEMHVGHLRSTIIGD+I+R+LE+ GH V+RLNHVGDWGT
Sbjct: 126 PLKTHKSLKPIVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHPVLRLNHVGDWGT 185
Query: 1283 QFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFD 1340
QFGMLI +L+ P+ LT + I DL FY+++KK FDEDE F+ + + VV LQ D
Sbjct: 186 QFGMLITYLKLVAPEALTTANAINLGDLVKFYRQAKKLFDEDETFQDASREEVVRLQNGD 245
Query: 1341 PDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGR 1400
P KAW+++CD SR +F+KIY RL++ +TERGESFY ++++ ++ L+ LL D+G
Sbjct: 246 PQSLKAWQLLCDQSRIEFEKIYKRLDIHITERGESFYNQYLQDVIDDLKSTNLLVTDNGA 305
Query: 1401 KIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEE----EKADWIVYVTD 1449
K ++ G+D +P+ + K+DGGF Y T+DLAAIR R++ + A ++YVTD
Sbjct: 306 KCIFLDDITGKDGKPLPLIVQKTDGGFNYATTDLAAIRYRLQAYPQGDGACRLIYVTD 363
>sp|Q7V493|SYR_PROMM Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9313)
GN=argS PE=3 SV=1
Length = 612
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 253/629 (40%), Positives = 354/629 (56%), Gaps = 66/629 (10%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMA 524
+S+ L A+ AFPE D + AS E FGDFQ N A+
Sbjct: 11 LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPE-----FGDFQANAALP 65
Query: 525 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 584
L K K + IA+ + +L + + + E+A PGF+N+ +
Sbjct: 66 LAKPLKQP---------PRQIAAAIVDQLMVDTAFTAICLTPEIAGPGFINLTVRPECLA 116
Query: 585 EQIKDIIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 632
+++ + N Q PT V+VDFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 117 AEVQARLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDS 171
Query: 633 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKK 690
++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+ P+ L + + DL FY+++K+
Sbjct: 172 LARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQ 231
Query: 691 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 750
RFD+DE F+ + + VV LQ DP KAW ++CD SRR+FQKIYDRL+V L ERGESFY
Sbjct: 232 RFDDDEAFQTTSREEVVKLQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFY 291
Query: 751 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 805
++E +V L GLL DDG + ++ G+D +P+ + KSDGGF Y T+DLAA+
Sbjct: 292 NAYLESVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAM 351
Query: 806 RQRI----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
R R + + A ++YVTD GQ HF + + A++AG + P+ R+ V FG+V GED
Sbjct: 352 RYRFAAPPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWI-PDAGRLQHVPFGLVQGED 410
Query: 862 RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYA 919
KK KTR+GDTV+L ELLDE + R+ L+ + + E + + V +KYA
Sbjct: 411 GKKLKTRAGDTVRLRELLDEAVERAESDLRRRLQEEGRDEDESFIEQVATTVGLAAVKYA 470
Query: 920 DLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSL 979
DLS NR +Y FSFD+ML +GNTA YLLYA RIA IAR G DL V + +
Sbjct: 471 DLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG----DLDVT--TAELQF 524
Query: 980 EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
+E+AL + LL+ + V+ V +L + LC YL+++S F+ FYD ++ + +
Sbjct: 525 SETQEWALVRELLKFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYDQVPVLKAEQPSR- 583
Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
+ RL L TA +K +L I T
Sbjct: 584 ----SCRLALCRLTADTLKLGLSLLGIPT 608
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/381 (41%), Positives = 217/381 (56%), Gaps = 52/381 (13%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMA 134
+S+ L A+ AFPE D + AS E FGDFQ N A+
Sbjct: 11 LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPE-----FGDFQANAALP 65
Query: 135 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 194
L K K + IA+ + +L + + + E+A PGF+N+ +
Sbjct: 66 LAKPLKQP---------PRQIAAAIVDQLMVDTAFTAICLTPEIAGPGFINLTVRPECLA 116
Query: 195 EQIKDIIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 242
+++ + N Q PT V+VDFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 117 AEVQARLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDS 171
Query: 243 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKK 300
++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+ P+ L + + DL FY+++K+
Sbjct: 172 LARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQ 231
Query: 301 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 360
RFD+DE F+ + + VV LQ DP KAW ++CD SRR+FQKIYDRL+V L ERGESFY
Sbjct: 232 RFDDDEAFQTTSREEVVKLQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFY 291
Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 415
++E +V L GLL DDG + ++ G+D +P+ + KSDGGF Y T+DLAA+
Sbjct: 292 NAYLESVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAM 351
Query: 416 RQRI----EEEKADWIVYVTD 432
R R + + A ++YVTD
Sbjct: 352 RYRFAAPPQGDGARRVIYVTD 372
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/381 (41%), Positives = 217/381 (56%), Gaps = 52/381 (13%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELG----------DKTASVASTNEKYVHKFGDFQCNDAMA 1151
+S+ L A+ AFPE D + AS E FGDFQ N A+
Sbjct: 11 LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPE-----FGDFQANAALP 65
Query: 1152 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 1211
L K K + IA+ + +L + + + E+A PGF+N+ +
Sbjct: 66 LAKPLKQP---------PRQIAAAIVDQLMVDTAFTAICLTPEIAGPGFINLTVRPECLA 116
Query: 1212 EQIKDIIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDT 1259
+++ + N Q PT V+VDFSSPNIAKEMHVGHLRSTIIGD+
Sbjct: 117 AEVQARLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDS 171
Query: 1260 ISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKK 1317
++R+LE+ GH V+RLNHVGDWGTQFGMLI HL+ P+ L + + DL FY+++K+
Sbjct: 172 LARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQ 231
Query: 1318 RFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFY 1377
RFD+DE F+ + + VV LQ DP KAW ++CD SRR+FQKIYDRL+V L ERGESFY
Sbjct: 232 RFDDDEAFQTTSREEVVKLQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFY 291
Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAI 1432
++E +V L GLL DDG + ++ G+D +P+ + KSDGGF Y T+DLAA+
Sbjct: 292 NAYLESVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAM 351
Query: 1433 RQRI----EEEKADWIVYVTD 1449
R R + + A ++YVTD
Sbjct: 352 RYRFAAPPQGDGARRVIYVTD 372
>sp|A2CDB7|SYR_PROM3 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9303)
GN=argS PE=3 SV=1
Length = 603
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 248/624 (39%), Positives = 353/624 (56%), Gaps = 56/624 (8%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH-----KFGDFQCNDAMALCKIF 529
+S+ L A+ AFPE + + + +FGDFQ N A+ L K
Sbjct: 2 LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPL 61
Query: 530 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 589
K + IA+ + +L + + + ++A PGF+N+ + +++
Sbjct: 62 KQP---------PRQIAAAIVDQLMVDTAFNAICLTPDIAGPGFINLTVRPECLAAEVQA 112
Query: 590 IIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLL 637
+ N Q PT V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+L
Sbjct: 113 RLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVL 167
Query: 638 EYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDED 695
E+ GH V+RLNHVGDWGTQFGMLI HL+ P+ L + + DL FY+++K+RFD+D
Sbjct: 168 EFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDD 227
Query: 696 EIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHME 755
E F+ + + VV LQ DP KAW ++CD SRR+FQKIYDRL+V L ERGESFY ++E
Sbjct: 228 EAFQTTSREEVVKLQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLE 287
Query: 756 QLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI- 809
+V L GLL DDG + ++ G+D +P+ + KSDGGF Y T+DLAA+R R
Sbjct: 288 SVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFA 347
Query: 810 ---EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFK 866
+ + A ++YVTD GQ HF + + A++AG + P+ R+ V FG+V GED KK K
Sbjct: 348 APPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWI-PDAGRLQHVPFGLVQGEDGKKLK 406
Query: 867 TRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSHN 924
TR+GDTV+L ELLDE + R+ L+ + + E + + V +KYADLS N
Sbjct: 407 TRAGDTVRLRELLDEAVERAESDLRRRLQEEGRDEDESFIEQVATTVGLAAVKYADLSQN 466
Query: 925 RNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKE 984
R +Y FSFD+ML +GNTA YLLYA RIA IAR G DL V + + +E
Sbjct: 467 RITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG----DLDVT--TAELQFSETQE 520
Query: 985 FALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHT 1044
+AL + LL+ + V+ V +L + LC YL+++S F+ FYD ++ + + +
Sbjct: 521 WALVRELLKFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYDQVPVLKAEQPSR-----S 575
Query: 1045 GRLLLAEATAKVMKKCFDILNIRT 1068
RL L TA +K +L I T
Sbjct: 576 CRLALCRLTADTLKLGLSLLGIPT 599
Score = 270 bits (690), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 216/376 (57%), Gaps = 42/376 (11%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH-----KFGDFQCNDAMALCKIF 139
+S+ L A+ AFPE + + + +FGDFQ N A+ L K
Sbjct: 2 LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPL 61
Query: 140 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 199
K + IA+ + +L + + + ++A PGF+N+ + +++
Sbjct: 62 KQP---------PRQIAAAIVDQLMVDTAFNAICLTPDIAGPGFINLTVRPECLAAEVQA 112
Query: 200 IIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLL 247
+ N Q PT V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+L
Sbjct: 113 RLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVL 167
Query: 248 EYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDED 305
E+ GH V+RLNHVGDWGTQFGMLI HL+ P+ L + + DL FY+++K+RFD+D
Sbjct: 168 EFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDD 227
Query: 306 EIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHME 365
E F+ + + VV LQ DP KAW ++CD SRR+FQKIYDRL+V L ERGESFY ++E
Sbjct: 228 EAFQTTSREEVVKLQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLE 287
Query: 366 QLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI- 419
+V L GLL DDG + ++ G+D +P+ + KSDGGF Y T+DLAA+R R
Sbjct: 288 SVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFA 347
Query: 420 ---EEEKADWIVYVTD 432
+ + A ++YVTD
Sbjct: 348 APPQGDGARRVIYVTD 363
Score = 270 bits (690), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 216/376 (57%), Gaps = 42/376 (11%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVH-----KFGDFQCNDAMALCKIF 1156
+S+ L A+ AFPE + + + +FGDFQ N A+ L K
Sbjct: 2 LSLAHALESQLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPL 61
Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKD 1216
K + IA+ + +L + + + ++A PGF+N+ + +++
Sbjct: 62 KQP---------PRQIAAAIVDQLMVDTAFNAICLTPDIAGPGFINLTVRPECLAAEVQA 112
Query: 1217 IIV------------NGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLL 1264
+ N Q PT V+VDFSSPNIAKEMHVGHLRSTIIGD+++R+L
Sbjct: 113 RLADARLGVPLVEGDNDGQQPT-----PVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVL 167
Query: 1265 EYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI--ADLQAFYKESKKRFDED 1322
E+ GH V+RLNHVGDWGTQFGMLI HL+ P+ L + + DL FY+++K+RFD+D
Sbjct: 168 EFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDD 227
Query: 1323 EIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHME 1382
E F+ + + VV LQ DP KAW ++CD SRR+FQKIYDRL+V L ERGESFY ++E
Sbjct: 228 EAFQTTSREEVVKLQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLE 287
Query: 1383 QLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI- 1436
+V L GLL DDG + ++ G+D +P+ + KSDGGF Y T+DLAA+R R
Sbjct: 288 SVVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFA 347
Query: 1437 ---EEEKADWIVYVTD 1449
+ + A ++YVTD
Sbjct: 348 APPQGDGARRVIYVTD 363
>sp|A2C016|SYR_PROM1 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain NATL1A)
GN=argS PE=3 SV=1
Length = 607
Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/625 (40%), Positives = 369/625 (59%), Gaps = 54/625 (8%)
Query: 475 MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 529
+ + L + A FP+ KT+S+ + + +FGDFQ N A++L K
Sbjct: 2 LEISARLEEALNRAFTKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61
Query: 530 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVY- 582
+ P DIAQ IA +L + ++ + +A PGF+N+ +S ++
Sbjct: 62 N-----RPPRDIAQQIAK----QLQQDNDFVRICNPPLIAGPGFINLSINSKTLISEIHF 112
Query: 583 ------AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 636
G +K + ++ N RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113 RLNDKRLGVPLKKFNTDKIEEEKSNN--RVIIDFSSPNIAKEMHVGHLRSTIIGDSLARV 170
Query: 637 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 694
LE+ G++V+RLNHVGDWGTQFGMLI HL++ P+ L TK I+DL FY+++KKRFDE
Sbjct: 171 LEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230
Query: 695 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 754
D+IF+ ++ VV LQ D + AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231 DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290
Query: 755 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 809
++ L+ K LL D G + ++ G+D P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291 VDVINDLKNKKLLINDQGAQCIFLDGLVGKDGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350
Query: 810 ----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
+ A ++YVTD GQ HF + + AK A + P +++ V FG+V GED KK
Sbjct: 351 TIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANWI-PTDCQIEHVPFGLVQGEDGKKL 409
Query: 866 KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSH 923
KTRSG+T++L +LLDE ++R+ D LK++ + E + + V IKYADLS
Sbjct: 410 KTRSGETIRLVDLLDEAIQRARDDLKNRLNTESRSENENFIDKVSTTVGIASIKYADLSQ 469
Query: 924 NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
NR +Y FSFDKML +GNTA YLLYA RIA I+R G DL V++Q+ + +
Sbjct: 470 NRISNYQFSFDKMLSLQGNTAPYLLYALVRIAGISRKGG----DLNVSSQN--IQFNESQ 523
Query: 984 EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
E+ L + LL+++ ++ V ++L + LC YL+++S F+ FYD ++ +
Sbjct: 524 EWDLIRKLLQLDSIIAEVEKELLPNRLCGYLFELSQTFNRFYDQVPILKASEPSR----- 578
Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
RL+L TA +K +L I T
Sbjct: 579 ASRLVLCSITADTLKLGMSLLGIPT 603
Score = 265 bits (676), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 228/377 (60%), Gaps = 40/377 (10%)
Query: 85 MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 139
+ + L + A FP+ KT+S+ + + +FGDFQ N A++L K
Sbjct: 2 LEISARLEEALNRAFTKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61
Query: 140 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVY- 192
+ P DIAQ IA +L + ++ + +A PGF+N+ +S ++
Sbjct: 62 N-----RPPRDIAQQIAK----QLQQDNDFVRICNPPLIAGPGFINLSINSKTLISEIHF 112
Query: 193 ------AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 246
G +K + ++ N RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113 RLNDKRLGVPLKKFNTDKIEEEKSNN--RVIIDFSSPNIAKEMHVGHLRSTIIGDSLARV 170
Query: 247 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 304
LE+ G++V+RLNHVGDWGTQFGMLI HL++ P+ L TK I+DL FY+++KKRFDE
Sbjct: 171 LEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230
Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 364
D+IF+ ++ VV LQ D + AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231 DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290
Query: 365 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 419
++ L+ K LL D G + ++ G+D P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291 VDVINDLKNKKLLINDQGAQCIFLDGLVGKDGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350
Query: 420 ----EEEKADWIVYVTD 432
+ A ++YVTD
Sbjct: 351 TIPPHGDGACRLIYVTD 367
Score = 265 bits (676), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 228/377 (60%), Gaps = 40/377 (10%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 1156
+ + L + A FP+ KT+S+ + + +FGDFQ N A++L K
Sbjct: 2 LEISARLEEALNRAFTKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61
Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVY- 1209
+ P DIAQ IA +L + ++ + +A PGF+N+ +S ++
Sbjct: 62 N-----RPPRDIAQQIAK----QLQQDNDFVRICNPPLIAGPGFINLSINSKTLISEIHF 112
Query: 1210 ------AGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 1263
G +K + ++ N RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113 RLNDKRLGVPLKKFNTDKIEEEKSNN--RVIIDFSSPNIAKEMHVGHLRSTIIGDSLARV 170
Query: 1264 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 1321
LE+ G++V+RLNHVGDWGTQFGMLI HL++ P+ L TK I+DL FY+++KKRFDE
Sbjct: 171 LEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230
Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 1381
D+IF+ ++ VV LQ D + AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231 DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290
Query: 1382 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 1436
++ L+ K LL D G + ++ G+D P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291 VDVINDLKNKKLLINDQGAQCIFLDGLVGKDGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350
Query: 1437 ----EEEKADWIVYVTD 1449
+ A ++YVTD
Sbjct: 351 TIPPHGDGACRLIYVTD 367
>sp|B4RU34|SYR_ALTMD Arginine--tRNA ligase OS=Alteromonas macleodii (strain DSM 17117 /
Deep ecotype) GN=argS PE=3 SV=1
Length = 576
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/606 (40%), Positives = 357/606 (58%), Gaps = 46/606 (7%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
M++ L + FT A+Q E+G + A V + +FG++Q N AMAL K K K
Sbjct: 1 MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53
Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ----IKDI 590
P DIA+ I V L + K+EVA PGF+NV L+ + Q + D
Sbjct: 54 ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLNDAWLANQCELSLTDP 102
Query: 591 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 650
+ + P N ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+
Sbjct: 103 RLGIAKSPEQN----IVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHM 158
Query: 651 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 710
GDWGTQFGML+AHL DK + + ++ ++DL+ FY+E+K RFDE+E F RA + VV LQ
Sbjct: 159 GDWGTQFGMLLAHLSDKLQEEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQ 217
Query: 711 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 767
D WE DVS +++YD+LNV+LT + GES Y + ++ L+ KGL
Sbjct: 218 GGDAQCLALWEKFIDVSITHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKTKGLA 277
Query: 768 ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 822
D G ++++ + G+ + IV KS GG+ Y T+DLAA+R R + AD + +TD
Sbjct: 278 VEDQGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTD 337
Query: 823 LGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEG 882
Q +HF+ E +KAG + +T + FG++LG D K FKTR+G TVKL ELLDE
Sbjct: 338 ARQALHFKQTEIVGRKAGFMKEEQT-YEHCPFGMMLGSDGKPFKTRTGGTVKLVELLDEA 396
Query: 883 LRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGN 942
+ R+ + + R +L+ EL E + V G +KYADLS NR DY+F++D ML GN
Sbjct: 397 VERAGKLIAE--RDNDLSEEELKEVARKVGIGAVKYADLSKNRTTDYMFNWDSMLSFEGN 454
Query: 943 TAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVT 1002
TA YL YAYTR+ S+ R AG++ +A + L ++E ALA L++ +V+ +V+
Sbjct: 455 TAPYLQYAYTRVKSLFRKAGVD-----MATMPVDIKLVEKQEHALAVLLMQFEEVIGMVS 509
Query: 1003 RDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFD 1062
R+ H LC YLYD+++AF FY+ C ++ EG V RL L+ AK ++K
Sbjct: 510 REATPHVLCTYLYDVASAFMTFYEACPMLK---EGIEPQVRDSRLALSALVAKTLEKGLT 566
Query: 1063 ILNIRT 1068
+L I T
Sbjct: 567 LLGIET 572
Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 214/362 (59%), Gaps = 35/362 (9%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
M++ L + FT A+Q E+G + A V + +FG++Q N AMAL K K K
Sbjct: 1 MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53
Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ----IKDI 200
P DIA+ I V L + K+EVA PGF+NV L+ + Q + D
Sbjct: 54 ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLNDAWLANQCELSLTDP 102
Query: 201 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 260
+ + P N ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+
Sbjct: 103 RLGIAKSPEQN----IVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHM 158
Query: 261 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 320
GDWGTQFGML+AHL DK + + ++ ++DL+ FY+E+K RFDE+E F RA + VV LQ
Sbjct: 159 GDWGTQFGMLLAHLSDKLQEEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQ 217
Query: 321 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 377
D WE DVS +++YD+LNV+LT + GES Y + ++ L+ KGL
Sbjct: 218 GGDAQCLALWEKFIDVSITHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKTKGLA 277
Query: 378 ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 432
D G ++++ + G+ + IV KS GG+ Y T+DLAA+R R + AD + +TD
Sbjct: 278 VEDQGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTD 337
Query: 433 HR 434
R
Sbjct: 338 AR 339
Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 214/362 (59%), Gaps = 35/362 (9%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
M++ L + FT A+Q E+G + A V + +FG++Q N AMAL K K K
Sbjct: 1 MNIHALLVNRFTEALQ----EMGVENAPVPVSRSAR-PEFGEYQFNGAMALAKQLKQK-- 53
Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQ----IKDI 1217
P DIA+ I V L + K+EVA PGF+NV L+ + Q + D
Sbjct: 54 ---PRDIAEKIVETV--------KLDDIASKLEVAGPGFINVHLNDAWLANQCELSLTDP 102
Query: 1218 IVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHV 1277
+ + P N ++VD+SSPN+AKEMHVGHLR+TIIGD + ++LE+LGH+V+R NH+
Sbjct: 103 RLGIAKSPEQN----IVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHM 158
Query: 1278 GDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQ 1337
GDWGTQFGML+AHL DK + + ++ ++DL+ FY+E+K RFDE+E F RA + VV LQ
Sbjct: 159 GDWGTQFGMLLAHLSDKLQEEVAET-ALSDLEDFYREAKVRFDEEEGFADRAREYVVKLQ 217
Query: 1338 RFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLL 1394
D WE DVS +++YD+LNV+LT + GES Y + ++ L+ KGL
Sbjct: 218 GGDAQCLALWEKFIDVSITHSEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKTKGLA 277
Query: 1395 ELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTD 1449
D G ++++ + G+ + IV KS GG+ Y T+DLAA+R R + AD + +TD
Sbjct: 278 VEDQGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILTD 337
Query: 1450 HR 1451
R
Sbjct: 338 AR 339
>sp|Q31CZ4|SYR_PROM9 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9312)
GN=argS PE=3 SV=1
Length = 604
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/581 (41%), Positives = 350/581 (60%), Gaps = 47/581 (8%)
Query: 512 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 571
+FGD+QCN + L KI+K K P +I++ + L N S++K+ +E+A P
Sbjct: 43 EEFGDYQCNVCLCLSKIYK-----KKPREISEDFVYL----LNKNKSISKLCKSLEIAGP 93
Query: 572 GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 624
GF+N+ L V E +I P + K L +V+VDFSSPNIAKEMHVGHL
Sbjct: 94 GFINIKLKDEVLINEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHL 153
Query: 625 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 682
RSTIIGD+ISR+ E G+ V+RLNHVGDWGTQFGMLI L+D + + L + I+DL
Sbjct: 154 RSTIIGDSISRIFELRGYQVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213
Query: 683 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 742
FYK SKKRFD + F+KR+ + VV LQ D +AW+++CD SR++F +IY L + +
Sbjct: 214 EFYKASKKRFDNESEFQKRSREEVVKLQSGDSKSIQAWKLLCDQSRKEFDEIYKNLKIKI 273
Query: 743 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 797
ERGESFY ++ ++ L+ K +L D G K M ++ +P+ + K DGGF Y
Sbjct: 274 KERGESFYNPFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLPLIVQKKDGGFNY 333
Query: 798 DTSDLAAIRQRIEE----EKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVG 853
T+DLAAIR R + + A I+YVTD GQ HF + + AKKA + P+K ++D V
Sbjct: 334 ATTDLAAIRYRFNKAPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWI-PDKCQVDHVP 392
Query: 854 FGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS----LDKLKDKNRHTELTPTELSEAQQ 909
FG+V G D KK KTR G+T++L +LL+E +RR+ L +L+D++R+ T ++ +
Sbjct: 393 FGLVQGIDGKKLKTREGETIRLKDLLNEAVRRAKEDLLKRLEDEDRYE--TEEFIANTSR 450
Query: 910 AVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGI--NSED 967
+ G +KYADLS NR +Y FSFDKML GNTA YLLY RI+ I R +SED
Sbjct: 451 IIGLGAVKYADLSQNRITNYQFSFDKMLSLNGNTAPYLLYTLVRISGIKRKNDFVYDSED 510
Query: 968 LRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDN 1027
+ ++ EH+ E+ L + LL+ ++V++ + +DL + LC YL+++ F+ FYD
Sbjct: 511 FQY------INYEHKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYDQ 564
Query: 1028 CYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
++++ K + RL L + TAK +K ++L I T
Sbjct: 565 VPILKEE-----KNIKISRLNLCDLTAKTLKLSLELLGIET 600
Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/330 (44%), Positives = 202/330 (61%), Gaps = 27/330 (8%)
Query: 122 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 181
+FGD+QCN + L KI+K K P +I++ + L N S++K+ +E+A P
Sbjct: 43 EEFGDYQCNVCLCLSKIYK-----KKPREISEDFVYL----LNKNKSISKLCKSLEIAGP 93
Query: 182 GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 234
GF+N+ L V E +I P + K L +V+VDFSSPNIAKEMHVGHL
Sbjct: 94 GFINIKLKDEVLINEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHL 153
Query: 235 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 292
RSTIIGD+ISR+ E G+ V+RLNHVGDWGTQFGMLI L+D + + L + I+DL
Sbjct: 154 RSTIIGDSISRIFELRGYQVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213
Query: 293 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 352
FYK SKKRFD + F+KR+ + VV LQ D +AW+++CD SR++F +IY L + +
Sbjct: 214 EFYKASKKRFDNESEFQKRSREEVVKLQSGDSKSIQAWKLLCDQSRKEFDEIYKNLKIKI 273
Query: 353 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 407
ERGESFY ++ ++ L+ K +L D G K M ++ +P+ + K DGGF Y
Sbjct: 274 KERGESFYNPFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLPLIVQKKDGGFNY 333
Query: 408 DTSDLAAIRQRIEE----EKADWIVYVTDH 433
T+DLAAIR R + + A I+YVTDH
Sbjct: 334 ATTDLAAIRYRFNKAPNGDDASRIIYVTDH 363
Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/330 (44%), Positives = 202/330 (61%), Gaps = 27/330 (8%)
Query: 1139 HKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKP 1198
+FGD+QCN + L KI+K K P +I++ + L N S++K+ +E+A P
Sbjct: 43 EEFGDYQCNVCLCLSKIYK-----KKPREISEDFVYL----LNKNKSISKLCKSLEIAGP 93
Query: 1199 GFVNVFLS-RVYAGEQIKDIIVNGVQPPTLNKKL------RVLVDFSSPNIAKEMHVGHL 1251
GF+N+ L V E +I P + K L +V+VDFSSPNIAKEMHVGHL
Sbjct: 94 GFINIKLKDEVLINEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHL 153
Query: 1252 RSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTK--SPPIADLQ 1309
RSTIIGD+ISR+ E G+ V+RLNHVGDWGTQFGMLI L+D + + L + I+DL
Sbjct: 154 RSTIIGDSISRIFELRGYQVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLV 213
Query: 1310 AFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTL 1369
FYK SKKRFD + F+KR+ + VV LQ D +AW+++CD SR++F +IY L + +
Sbjct: 214 EFYKASKKRFDNESEFQKRSREEVVKLQSGDSKSIQAWKLLCDQSRKEFDEIYKNLKIKI 273
Query: 1370 TERGESFYQKHMEQLVPYLEKKGLLELDDGRKI-----MWGEDRGSIPMTIVKSDGGFTY 1424
ERGESFY ++ ++ L+ K +L D G K M ++ +P+ + K DGGF Y
Sbjct: 274 KERGESFYNPFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLPLIVQKKDGGFNY 333
Query: 1425 DTSDLAAIRQRIEE----EKADWIVYVTDH 1450
T+DLAAIR R + + A I+YVTDH
Sbjct: 334 ATTDLAAIRYRFNKAPNGDDASRIIYVTDH 363
>sp|Q46HI6|SYR_PROMT Arginine--tRNA ligase OS=Prochlorococcus marinus (strain NATL2A)
GN=argS PE=3 SV=1
Length = 607
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 247/625 (39%), Positives = 370/625 (59%), Gaps = 54/625 (8%)
Query: 475 MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 529
+ + L + A FP+ KT+S+ + + +FGDFQ N A++L K
Sbjct: 2 LEISARLEEALNRAFIKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61
Query: 530 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVYA 583
K + P +IAQ IA+ +L + ++ + +A PGF+N+ +S ++
Sbjct: 62 K-----QPPREIAQKIAN----QLQKDNDFVRMCNPPRIAGPGFINLSINSKTLISEIHV 112
Query: 584 -------GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 636
G +K + ++ N RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113 RLNDKRLGVPLKKFSTDKIEEGKSNN--RVILDFSSPNIAKEMHVGHLRSTIIGDSLARI 170
Query: 637 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 694
LE+ G++V+RLNHVGDWGTQFGMLI HL++ P+ L TK I+DL FY+++KKRFDE
Sbjct: 171 LEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230
Query: 695 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 754
D+IF+ ++ VV LQ D + AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231 DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290
Query: 755 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 809
++ L+ K LL D G + ++ G++ P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291 VDVINDLKNKKLLINDQGAQCIFLDGLVGKNGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350
Query: 810 ----EEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
+ A ++YVTD GQ HF + + AK A + P +++ V FG+V GED KK
Sbjct: 351 TIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANWI-PTDCQIEHVPFGLVQGEDGKKL 409
Query: 866 KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTE--LSEAQQAVAYGCIKYADLSH 923
KTRSG+T++L +LLDE ++R+ + LK++ + E + + V IKYADLS
Sbjct: 410 KTRSGETIRLVDLLDEAIQRAKNDLKNRLNTERRSENENFIDKVSTTVGIASIKYADLSQ 469
Query: 924 NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
NR +Y FSFDKML +GNTA YLLYA RIA I+R G DL V++ + + +
Sbjct: 470 NRISNYQFSFDKMLSLQGNTAPYLLYALVRIAGISRKGG----DLNVSSHN--IQFNESQ 523
Query: 984 EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
E+ L + LL+++ ++ V ++L + LC YL+++S F+ FYD ++ +
Sbjct: 524 EWELIRKLLQLDYIIAEVEKELLPNRLCGYLFELSQTFNRFYDQVPILKASEPSR----- 578
Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
RL+L TA +K +L I T
Sbjct: 579 ASRLILCSITADTLKLGMSLLGIPT 603
Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/377 (41%), Positives = 230/377 (61%), Gaps = 40/377 (10%)
Query: 85 MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 139
+ + L + A FP+ KT+S+ + + +FGDFQ N A++L K
Sbjct: 2 LEISARLEEALNRAFIKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61
Query: 140 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVYA 193
K + P +IAQ IA+ +L + ++ + +A PGF+N+ +S ++
Sbjct: 62 K-----QPPREIAQKIAN----QLQKDNDFVRMCNPPRIAGPGFINLSINSKTLISEIHV 112
Query: 194 -------GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 246
G +K + ++ N RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113 RLNDKRLGVPLKKFSTDKIEEGKSNN--RVILDFSSPNIAKEMHVGHLRSTIIGDSLARI 170
Query: 247 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 304
LE+ G++V+RLNHVGDWGTQFGMLI HL++ P+ L TK I+DL FY+++KKRFDE
Sbjct: 171 LEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230
Query: 305 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 364
D+IF+ ++ VV LQ D + AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231 DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290
Query: 365 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 419
++ L+ K LL D G + ++ G++ P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291 VDVINDLKNKKLLINDQGAQCIFLDGLVGKNGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350
Query: 420 ----EEEKADWIVYVTD 432
+ A ++YVTD
Sbjct: 351 TIPPHGDGACRLIYVTD 367
Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/377 (41%), Positives = 230/377 (61%), Gaps = 40/377 (10%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPE--LGDKTASVASTNE---KYVHKFGDFQCNDAMALCKIF 1156
+ + L + A FP+ KT+S+ + + +FGDFQ N A++L K
Sbjct: 2 LEISARLEEALNRAFIKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEI 61
Query: 1157 KDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNV------FLSRVYA 1210
K + P +IAQ IA+ +L + ++ + +A PGF+N+ +S ++
Sbjct: 62 K-----QPPREIAQKIAN----QLQKDNDFVRMCNPPRIAGPGFINLSINSKTLISEIHV 112
Query: 1211 -------GEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRL 1263
G +K + ++ N RV++DFSSPNIAKEMHVGHLRSTIIGD+++R+
Sbjct: 113 RLNDKRLGVPLKKFSTDKIEEGKSNN--RVILDFSSPNIAKEMHVGHLRSTIIGDSLARI 170
Query: 1264 LEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS-PPIADLQAFYKESKKRFDE 1321
LE+ G++V+RLNHVGDWGTQFGMLI HL++ P+ L TK I+DL FY+++KKRFDE
Sbjct: 171 LEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDE 230
Query: 1322 DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHM 1381
D+IF+ ++ VV LQ D + AW+++C+ SR++FQKIYDRL++ LTERGESFY K +
Sbjct: 231 DQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFL 290
Query: 1382 EQLVPYLEKKGLLELDDGRKIMW-----GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRI 1436
++ L+ K LL D G + ++ G++ P+ I KSDGGF Y T+DLAAI+ R+
Sbjct: 291 VDVINDLKNKKLLINDQGAQCIFLDGLVGKNGKPQPIIIQKSDGGFNYATTDLAAIKYRL 350
Query: 1437 ----EEEKADWIVYVTD 1449
+ A ++YVTD
Sbjct: 351 TIPPHGDGACRLIYVTD 367
>sp|A5UCH1|SYR_HAEIE Arginine--tRNA ligase OS=Haemophilus influenzae (strain PittEE)
GN=argS PE=3 SV=1
Length = 577
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/605 (39%), Positives = 353/605 (58%), Gaps = 43/605 (7%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
M+++ LSD A+ +A G + A + +FGD+Q N MA K
Sbjct: 1 MNIQSILSDKIKQAMVIA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52
Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 593
NP + AQ + N L+ + +K+E+A PGF+N+FL+ + +I + +
Sbjct: 53 -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103
Query: 594 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
G+Q K V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160
Query: 652 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
DWGTQFGMLIA+L+ K + + DL+AFY+E+KK +DEDEIF ++A VV LQ
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQG 219
Query: 712 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 768
D + W+ + D++ + Q YDRLNVTLTE+ GES Y + +V L+K+GL
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279
Query: 769 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDL 823
DDG +++ + ++ PM ++ K DGGF Y T+D+AA + R E KA+ + +D
Sbjct: 280 EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339
Query: 824 GQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGL 883
Q H + +KAG + P+ ++ FG++LG+D K FKTR+G TVKL++LLDE +
Sbjct: 340 RQSQHMQQAWLITRKAGYV-PDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAI 398
Query: 884 RRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNT 943
R+ + +KN T L+ E +A+ G +KYADLS NR DYVF +D ML GNT
Sbjct: 399 ERATVLINEKN--TNLSNDEKQAVIEAIGIGSVKYADLSKNRTTDYVFDWDNMLSFEGNT 456
Query: 944 AVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTR 1003
A Y+ YAYTRI SI INS L A P++++ +KE LA LL+ + + V +
Sbjct: 457 APYMQYAYTRIRSIFNKTEINSTALLAA----PLTIKDDKERTLAIKLLQFEEAVQTVGK 512
Query: 1004 DLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDI 1063
+ H LC YLY+++ FS FY++C + + E V RL LA T K +K+ ++
Sbjct: 513 EGTPHVLCAYLYELAGIFSSFYEHCPILNAEDEA----VKLSRLKLALLTEKTLKQGLEL 568
Query: 1064 LNIRT 1068
L I+T
Sbjct: 569 LGIKT 573
Score = 256 bits (654), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 244/441 (55%), Gaps = 35/441 (7%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
M+++ LSD A+ +A G + A + +FGD+Q N MA K
Sbjct: 1 MNIQSILSDKIKQAMVIA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52
Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 203
NP + AQ + N L+ + +K+E+A PGF+N+FL+ + +I + +
Sbjct: 53 -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103
Query: 204 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 261
G+Q K V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160
Query: 262 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 321
DWGTQFGMLIA+L+ K + + DL+AFY+E+KK +DEDEIF ++A VV LQ
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQG 219
Query: 322 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 378
D + W+ + D++ + Q YDRLNVTLTE+ GES Y + +V L+K+GL
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279
Query: 379 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 433
DDG +++ + ++ PM ++ K DGGF Y T+D+AA + R E KA+ + +D
Sbjct: 280 EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339
Query: 434 RSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKM---NVPVRDRMSVRDYLSDVFTHAVQ 490
R + QA K + S S + K + P + R L+D+ A++
Sbjct: 340 RQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLADLLDEAIE 399
Query: 491 VAFPELGDKTASVASTNEKYV 511
A + +K ++++ ++ V
Sbjct: 400 RATVLINEKNTNLSNDEKQAV 420
Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 215/368 (58%), Gaps = 32/368 (8%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
M+++ LSD A+ +A G + A + +FGD+Q N MA K
Sbjct: 1 MNIQSILSDKIKQAMVIA----GADQSCDALVRQSGKPQFGDYQANGIMAAAKKLG---- 52
Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN- 1220
NP + AQ + N L+ + +K+E+A PGF+N+FL+ + +I + +
Sbjct: 53 -LNPREFAQKVLD--------NLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHK 103
Query: 1221 --GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 1278
G+Q K V++D+SSPN+AKEMHVGHLRSTIIGD ++R LE+LGH+V+R NHVG
Sbjct: 104 NLGIQA---TNKQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVG 160
Query: 1279 DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 1338
DWGTQFGMLIA+L+ K + + DL+AFY+E+KK +DEDEIF ++A VV LQ
Sbjct: 161 DWGTQFGMLIAYLE-KMQNEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQG 219
Query: 1339 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKGLLE 1395
D + W+ + D++ + Q YDRLNVTLTE+ GES Y + +V L+K+GL
Sbjct: 220 GDEYCRAMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLAV 279
Query: 1396 LDDGRKIMWGE---DRGSIPMTIV--KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDH 1450
DDG +++ + ++ PM ++ K DGGF Y T+D+AA + R E KA+ + +D
Sbjct: 280 EDDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDT 339
Query: 1451 RSYHQVLQ 1458
R + Q
Sbjct: 340 RQSQHMQQ 347
>sp|B8CI29|SYR_SHEPW Arginine--tRNA ligase OS=Shewanella piezotolerans (strain WP3 / JCM
13877) GN=argS PE=3 SV=1
Length = 581
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/565 (41%), Positives = 339/565 (60%), Gaps = 39/565 (6%)
Query: 515 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
GDF N AM L K +KNP +IAQ I N + ++K+E+A PGF+
Sbjct: 41 GDFATNLAMMLTK-----AARKNPREIAQLIID--------NLPQSSHVEKVEIAGPGFI 87
Query: 575 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
N F+ Q+ D + + TL + V+VD+SSPN+AKEMHVGHLRSTIIGD++
Sbjct: 88 NFFIDDNALANQLMDALNSDHLGVTLPESQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147
Query: 635 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 693
R LE++GH+V+R NHVGDWGTQFGML+A++++ + + ++DL+ FY+ +K RFD
Sbjct: 148 RSLEFMGHNVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQIELSDLENFYRAAKVRFD 207
Query: 694 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
E E F RA + VVALQ D K W D+S +IY+RL V+LT RGES Y
Sbjct: 208 ESEDFANRARKLVVALQSGDEYCNKLWREFNDISLSHCHEIYERLGVSLTRQDVRGESSY 267
Query: 751 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 805
+EQ+V L+ +GLL +G K+++ E+ + +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268 NDDLEQVVADLDSQGLLSESNGAKVVFQEEFKNKEGEPLPVIIQKADGGYLYATSDMAAM 327
Query: 806 RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDF--VGFGVVLGEDRK 863
R R KAD +Y DL Q +HF+ + + AK A + + M F +GFG + GED +
Sbjct: 328 RYRSNVLKADRALYFVDLRQALHFQQVFKLAKTAKFV---REEMSFEHMGFGTMNGEDGR 384
Query: 864 KFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSH 923
FKTRSG VKL +LL E R+L+ ++ KN ++ EL+E + V +KYADLS
Sbjct: 385 PFKTRSGGVVKLIDLLKEADTRALELVRSKN--PDMDEAELAEIARVVGIASVKYADLSK 442
Query: 924 NRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEK 983
NR DY+FSF++ML GNTA YLLYAYTR+A I + A +D+ ++ + LEHEK
Sbjct: 443 NRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA----QDVDLS--DAKIVLEHEK 496
Query: 984 EFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVH 1043
E L L + +V+ V H LC YL++++ AFS FY+ C + D E + K+
Sbjct: 497 EKDLGTKLAQFGEVMNRVVNKGQPHALCAYLFELAGAFSSFYEACPVLAADTEAQKKS-- 554
Query: 1044 TGRLLLAEATAKVMKKCFDILNIRT 1068
RLLLA+ TAK +K+ ++L + T
Sbjct: 555 --RLLLAQLTAKTLKQGLNLLGLET 577
Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 197/329 (59%), Gaps = 25/329 (7%)
Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
GDF N AM L K +KNP +IAQ I N + ++K+E+A PGF+
Sbjct: 41 GDFATNLAMMLTK-----AARKNPREIAQLIID--------NLPQSSHVEKVEIAGPGFI 87
Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
N F+ Q+ D + + TL + V+VD+SSPN+AKEMHVGHLRSTIIGD++
Sbjct: 88 NFFIDDNALANQLMDALNSDHLGVTLPESQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147
Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 303
R LE++GH+V+R NHVGDWGTQFGML+A++++ + + ++DL+ FY+ +K RFD
Sbjct: 148 RSLEFMGHNVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQIELSDLENFYRAAKVRFD 207
Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
E E F RA + VVALQ D K W D+S +IY+RL V+LT RGES Y
Sbjct: 208 ESEDFANRARKLVVALQSGDEYCNKLWREFNDISLSHCHEIYERLGVSLTRQDVRGESSY 267
Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 415
+EQ+V L+ +GLL +G K+++ E+ + +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268 NDDLEQVVADLDSQGLLSESNGAKVVFQEEFKNKEGEPLPVIIQKADGGYLYATSDMAAM 327
Query: 416 RQRIEEEKADWIVYVTDHRS---YHQVLQ 441
R R KAD +Y D R + QV +
Sbjct: 328 RYRSNVLKADRALYFVDLRQALHFQQVFK 356
Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 197/329 (59%), Gaps = 25/329 (7%)
Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
GDF N AM L K +KNP +IAQ I N + ++K+E+A PGF+
Sbjct: 41 GDFATNLAMMLTK-----AARKNPREIAQLIID--------NLPQSSHVEKVEIAGPGFI 87
Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
N F+ Q+ D + + TL + V+VD+SSPN+AKEMHVGHLRSTIIGD++
Sbjct: 88 NFFIDDNALANQLMDALNSDHLGVTLPESQTVVVDYSSPNLAKEMHVGHLRSTIIGDSVV 147
Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD-KFPDYLTKSPPIADLQAFYKESKKRFD 1320
R LE++GH+V+R NHVGDWGTQFGML+A++++ + + ++DL+ FY+ +K RFD
Sbjct: 148 RSLEFMGHNVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQIELSDLENFYRAAKVRFD 207
Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
E E F RA + VVALQ D K W D+S +IY+RL V+LT RGES Y
Sbjct: 208 ESEDFANRARKLVVALQSGDEYCNKLWREFNDISLSHCHEIYERLGVSLTRQDVRGESSY 267
Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 1432
+EQ+V L+ +GLL +G K+++ E+ + +P+ I K+DGG+ Y TSD+AA+
Sbjct: 268 NDDLEQVVADLDSQGLLSESNGAKVVFQEEFKNKEGEPLPVIIQKADGGYLYATSDMAAM 327
Query: 1433 RQRIEEEKADWIVYVTDHRS---YHQVLQ 1458
R R KAD +Y D R + QV +
Sbjct: 328 RYRSNVLKADRALYFVDLRQALHFQQVFK 356
>sp|C6DFD9|SYR_PECCP Arginine--tRNA ligase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=argS PE=3 SV=1
Length = 576
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/611 (39%), Positives = 350/611 (57%), Gaps = 56/611 (9%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
M+++ LS+ + A+ A G S A + +FGD+Q N MA+ K
Sbjct: 1 MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52
Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
P +A+ + ++ +L + +K E+A PGF+N+FL + + Q+++ +
Sbjct: 53 -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103
Query: 592 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
+ V+P T +++D+S+PN+AKEMHVGHLRSTIIGD +R LE+LGH+V+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157
Query: 649 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
HVGDWGTQFGMLIA+L+ K + ++DL+AFY+E+KK +D+D F +RA VV
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASEMDLSDLEAFYREAKKHYDDDADFAERARGYVVK 216
Query: 709 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
LQ D ++ W + D++ Q Y+RLNVTLT++ GES Y + +V L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276
Query: 766 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
L +G +++ GE G I I K DGG+ Y T+D+A + R E AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333
Query: 818 VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
+Y D Q H +KAG + P+ ++ FG++LG+D K FKTR+G T+KLSE
Sbjct: 334 LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392
Query: 878 LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
LLDE R+L + +KN E ELS + V+ G IKYADLS +R DYVF +D ML
Sbjct: 393 LLDEAYDRALKLIAEKNPQME--SDELSALAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450
Query: 938 DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
GNTA Y+ YAYTR+ASI + AGI + L + P++L E+EFALA LL+ +
Sbjct: 451 AFEGNTAPYMQYAYTRVASIFKRAGIQEDSL-----TQPITLSDEREFALATRLLQFEET 505
Query: 998 LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
+ V R+ H +C YLYD++ FS FY++C + +++ V RL LA TAK +
Sbjct: 506 ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAESD----DVRQSRLRLALLTAKTL 561
Query: 1058 KKCFDILNIRT 1068
K+ D L I T
Sbjct: 562 KQGLDTLGIET 572
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 212/375 (56%), Gaps = 44/375 (11%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
M+++ LS+ + A+ A G S A + +FGD+Q N MA+ K
Sbjct: 1 MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52
Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
P +A+ + ++ +L + +K E+A PGF+N+FL + + Q+++ +
Sbjct: 53 -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103
Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
+ V+P T +++D+S+PN+AKEMHVGHLRSTIIGD +R LE+LGH+V+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157
Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
HVGDWGTQFGMLIA+L+ K + ++DL+AFY+E+KK +D+D F +RA VV
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASEMDLSDLEAFYREAKKHYDDDADFAERARGYVVK 216
Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
LQ D ++ W + D++ Q Y+RLNVTLT++ GES Y + +V L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276
Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
L +G +++ GE G I I K DGG+ Y T+D+A + R E AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333
Query: 428 VYVTDHRSYHQVLQA 442
+Y D R + ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348
Score = 237 bits (604), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 211/374 (56%), Gaps = 44/374 (11%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
M+++ LS+ + A+ A G S A + +FGD+Q N MA+ K
Sbjct: 1 MNIQALLSEKVSQALTAA----GAPADSEAQIRQSAKAQFGDYQANGVMAVAKKLG---- 52
Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
P +A+ + ++ +L + +K E+A PGF+N+FL + + Q+++ +
Sbjct: 53 -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103
Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
+ V+P T +++D+S+PN+AKEMHVGHLRSTIIGD +R LE+LGH+V+R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRAN 157
Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
HVGDWGTQFGMLIA+L+ K + ++DL+AFY+E+KK +D+D F +RA VV
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNENASEMDLSDLEAFYREAKKHYDDDADFAERARGYVVK 216
Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
LQ D ++ W + D++ Q Y+RLNVTLT++ GES Y + +V L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKG 276
Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
L +G +++ GE G I I K DGG+ Y T+D+A + R E AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333
Query: 1445 VYVTDHRSYHQVLQ 1458
+Y D R + ++Q
Sbjct: 334 LYYIDSRQHQHLMQ 347
>sp|Q6D474|SYR_ERWCT Arginine--tRNA ligase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=argS PE=3 SV=1
Length = 576
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/611 (38%), Positives = 349/611 (57%), Gaps = 56/611 (9%)
Query: 475 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 534
M+++ LS+ + A+ A G S A + +FGD+Q N MA+ K
Sbjct: 1 MNIQALLSEKVSQALTAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52
Query: 535 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 591
P +A+ + ++ +L + +K E+A PGF+N+FL + + Q+++ +
Sbjct: 53 -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103
Query: 592 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 648
+ V+P T +++D+S+PN+AKEMHVGHLRSTIIGD +R LE+LGH+++R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNIIRAN 157
Query: 649 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 708
HVGDWGTQFGMLIA+L+ K + ++DL+AFY+E+KK +DED F +RA VV
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216
Query: 709 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 765
LQ D ++ W + D++ Q Y+RLNVTLT++ GES Y + +V L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPNIVADLKAKG 276
Query: 766 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 817
L +G +++ GE G I I K DGG+ Y T+D+A + R E AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333
Query: 818 VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSE 877
+Y D Q H +KAG + P+ ++ FG++LG+D K FKTR+G T+KLSE
Sbjct: 334 LYYIDSRQHQHLMQAWTIVRKAGYV-PDSVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSE 392
Query: 878 LLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKML 937
LLDE R+L + +KN E EL+ + V+ G IKYADLS +R DYVF +D ML
Sbjct: 393 LLDEAYGRALKLIAEKNPQME--SDELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNML 450
Query: 938 DDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDV 997
GNTA Y+ YAYTR+ASI + AGI + L + P++L E+EFALA LL+ +
Sbjct: 451 AFEGNTAPYMQYAYTRVASIFKRAGIQEDTL-----TQPITLNDEREFALATRLLQFEET 505
Query: 998 LMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVM 1057
+ V R+ H +C YLYD++ FS FY++C + + + V RL LA TAK +
Sbjct: 506 ITSVAREGTPHVMCSYLYDLAGLFSGFYEHCPILNAEND----DVRQSRLRLALLTAKTL 561
Query: 1058 KKCFDILNIRT 1068
K+ D L I T
Sbjct: 562 KQGLDTLGIET 572
Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 212/375 (56%), Gaps = 44/375 (11%)
Query: 85 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 144
M+++ LS+ + A+ A G S A + +FGD+Q N MA+ K
Sbjct: 1 MNIQALLSEKVSQALTAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52
Query: 145 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 201
P +A+ + ++ +L + +K E+A PGF+N+FL + + Q+++ +
Sbjct: 53 -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103
Query: 202 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 258
+ V+P T +++D+S+PN+AKEMHVGHLRSTIIGD +R LE+LGH+++R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNIIRAN 157
Query: 259 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 318
HVGDWGTQFGMLIA+L+ K + ++DL+AFY+E+KK +DED F +RA VV
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216
Query: 319 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 375
LQ D ++ W + D++ Q Y+RLNVTLT++ GES Y + +V L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPNIVADLKAKG 276
Query: 376 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 427
L +G +++ GE G I I K DGG+ Y T+D+A + R E AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333
Query: 428 VYVTDHRSYHQVLQA 442
+Y D R + ++QA
Sbjct: 334 LYYIDSRQHQHLMQA 348
Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 211/374 (56%), Gaps = 44/374 (11%)
Query: 1102 MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGE 1161
M+++ LS+ + A+ A G S A + +FGD+Q N MA+ K
Sbjct: 1 MNIQALLSEKVSQALTAA----GAPADSEAQVRQSAKAQFGDYQANGVMAVAKKLG---- 52
Query: 1162 KKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII--- 1218
P +A+ + ++ +L + +K E+A PGF+N+FL + + Q+++ +
Sbjct: 53 -MPPRQLAEKVVQLL--------ALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAP 103
Query: 1219 ---VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLN 1275
+ V+P T +++D+S+PN+AKEMHVGHLRSTIIGD +R LE+LGH+++R N
Sbjct: 104 KLGLTPVEPQT------IVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNIIRAN 157
Query: 1276 HVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVA 1335
HVGDWGTQFGMLIA+L+ K + ++DL+AFY+E+KK +DED F +RA VV
Sbjct: 158 HVGDWGTQFGMLIAYLE-KMQNESANEMDLSDLEAFYREAKKHYDEDADFAERARGYVVK 216
Query: 1336 LQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTER---GESFYQKHMEQLVPYLEKKG 1392
LQ D ++ W + D++ Q Y+RLNVTLT++ GES Y + +V L+ KG
Sbjct: 217 LQGGDEYCRQMWRKLVDITMTQNQINYERLNVTLTKQDVMGESLYNSMLPNIVADLKAKG 276
Query: 1393 LLELDDGRKIMW--------GEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWI 1444
L +G +++ GE G I I K DGG+ Y T+D+A + R E AD +
Sbjct: 277 LAVESEGATVVFLDEYKNKEGEPMGVI---IQKKDGGYLYTTTDIACAKYRYETLNADRV 333
Query: 1445 VYVTDHRSYHQVLQ 1458
+Y D R + ++Q
Sbjct: 334 LYYIDSRQHQHLMQ 347
>sp|A3Q9V2|SYR_SHELP Arginine--tRNA ligase OS=Shewanella loihica (strain ATCC BAA-1088 /
PV-4) GN=argS PE=3 SV=1
Length = 581
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/563 (41%), Positives = 333/563 (59%), Gaps = 35/563 (6%)
Query: 515 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 574
GDF N AM L K+ +KNP ++AQ ++ L N +AKV E+A PGF+
Sbjct: 41 GDFATNLAMMLTKV-----ARKNPREVAQ----LIIDSLPQNSQVAKV----EIAGPGFI 87
Query: 575 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 634
N F+ Q+ + + TL V+VD+SSPN+AKEMHVGHLRSTIIGD +
Sbjct: 88 NFFIDENALTNQLMAALSDDHLGVTLPTPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 147
Query: 635 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 693
R LE+ GH V+R NHVGDWGTQFGML+A++++ ++ +ADL++FY+ +K RFD
Sbjct: 148 RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAQQGEQAQVELADLESFYRAAKVRFD 207
Query: 694 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 750
E E F RA Q VV LQ D K W D+S ++Y+RL V+LT RGES Y
Sbjct: 208 ESEEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAY 267
Query: 751 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 805
+EQ+V L+ +GLL +G K+++ ++ + +P+ I K+DGGF Y TSDLAA+
Sbjct: 268 NDDLEQVVRDLDAQGLLSESNGAKVVFQDEFQTKEGEPLPVIIQKADGGFLYATSDLAAM 327
Query: 806 RQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKF 865
R R KAD +Y DL Q +HF+ + A+ A + P + ++ +GFG + GED + F
Sbjct: 328 RYRSNVLKADRALYFVDLRQALHFQQVFSLARTANFVRPELS-LEHMGFGTMNGEDGRPF 386
Query: 866 KTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNR 925
KTRSG VKL +LL E R+L+ ++ KN ++ EL++ + V +KYADLS NR
Sbjct: 387 KTRSGGVVKLVDLLSEAETRALELVRSKN--PDMDEEELAKIAKVVGIASVKYADLSKNR 444
Query: 926 NLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEF 985
DY+FSF++ML GNTA YLLYAYTR+A I + A + + LEH+KE
Sbjct: 445 ASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRAA------EIDLTGASIKLEHDKEK 498
Query: 986 ALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTG 1045
L L + +VL + H LC YL++++ AFS FY+ C + D+E + K+
Sbjct: 499 ELGNKLAQFAEVLGRMVAKGQPHALCGYLFELAGAFSSFYEACPVLAADSEDEKKS---- 554
Query: 1046 RLLLAEATAKVMKKCFDILNIRT 1068
RLLLA+ TAK +K+ D+L I T
Sbjct: 555 RLLLAQLTAKTLKQGLDLLGIET 577
Score = 240 bits (612), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 138/319 (43%), Positives = 190/319 (59%), Gaps = 22/319 (6%)
Query: 125 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 184
GDF N AM L K+ +KNP ++AQ ++ L N +AKV E+A PGF+
Sbjct: 41 GDFATNLAMMLTKV-----ARKNPREVAQ----LIIDSLPQNSQVAKV----EIAGPGFI 87
Query: 185 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 244
N F+ Q+ + + TL V+VD+SSPN+AKEMHVGHLRSTIIGD +
Sbjct: 88 NFFIDENALTNQLMAALSDDHLGVTLPTPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 147
Query: 245 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 303
R LE+ GH V+R NHVGDWGTQFGML+A++++ ++ +ADL++FY+ +K RFD
Sbjct: 148 RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAQQGEQAQVELADLESFYRAAKVRFD 207
Query: 304 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 360
E E F RA Q VV LQ D K W D+S ++Y+RL V+LT RGES Y
Sbjct: 208 ESEEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAY 267
Query: 361 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 415
+EQ+V L+ +GLL +G K+++ ++ + +P+ I K+DGGF Y TSDLAA+
Sbjct: 268 NDDLEQVVRDLDAQGLLSESNGAKVVFQDEFQTKEGEPLPVIIQKADGGFLYATSDLAAM 327
Query: 416 RQRIEEEKADWIVYVTDHR 434
R R KAD +Y D R
Sbjct: 328 RYRSNVLKADRALYFVDLR 346
Score = 240 bits (612), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 138/319 (43%), Positives = 190/319 (59%), Gaps = 22/319 (6%)
Query: 1142 GDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFV 1201
GDF N AM L K+ +KNP ++AQ ++ L N +AKV E+A PGF+
Sbjct: 41 GDFATNLAMMLTKV-----ARKNPREVAQ----LIIDSLPQNSQVAKV----EIAGPGFI 87
Query: 1202 NVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTIS 1261
N F+ Q+ + + TL V+VD+SSPN+AKEMHVGHLRSTIIGD +
Sbjct: 88 NFFIDENALTNQLMAALSDDHLGVTLPTPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 147
Query: 1262 RLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSP-PIADLQAFYKESKKRFD 1320
R LE+ GH V+R NHVGDWGTQFGML+A++++ ++ +ADL++FY+ +K RFD
Sbjct: 148 RALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAQQGEQAQVELADLESFYRAAKVRFD 207
Query: 1321 EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RGESFY 1377
E E F RA Q VV LQ D K W D+S ++Y+RL V+LT RGES Y
Sbjct: 208 ESEEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAY 267
Query: 1378 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGS-----IPMTIVKSDGGFTYDTSDLAAI 1432
+EQ+V L+ +GLL +G K+++ ++ + +P+ I K+DGGF Y TSDLAA+
Sbjct: 268 NDDLEQVVRDLDAQGLLSESNGAKVVFQDEFQTKEGEPLPVIIQKADGGFLYATSDLAAM 327
Query: 1433 RQRIEEEKADWIVYVTDHR 1451
R R KAD +Y D R
Sbjct: 328 RYRSNVLKADRALYFVDLR 346
>sp|Q15W53|SYR_PSEA6 Arginine--tRNA ligase OS=Pseudoalteromonas atlantica (strain T6c /
ATCC BAA-1087) GN=argS PE=3 SV=1
Length = 578
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/567 (41%), Positives = 331/567 (58%), Gaps = 40/567 (7%)
Query: 514 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 573
FGD+Q N AMAL K+ K K P DIA+ I V L + +K+EVA PGF
Sbjct: 36 FGDYQFNGAMALAKVLKQK-----PRDIAEKIVEAV--------ELDGIAEKLEVAGPGF 82
Query: 574 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 629
+N++LS+ + Q+ + P LN + + V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83 INIYLSKEWLAAQLS----HAAADPRLNIESQPTKTVVVDYSSPNLAKEMHVGHLRTTII 138
Query: 630 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 689
GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK ++DL+ FY+E+K
Sbjct: 139 GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198
Query: 690 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 746
RFDE+E F RA + VV LQ D W+ DVS +++Y +LNV+LT G
Sbjct: 199 VRFDEEEGFADRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHKLNVSLTRDDIMG 258
Query: 747 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 801
ES Y + +V L+ KGL G ++++ + G+ IV KS GG+ Y T+D
Sbjct: 259 ESAYNHDLANVVSELQAKGLAVESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTD 318
Query: 802 LAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED 861
LAAIR R ++ AD + +TD Q +HF+ E A+KAG + P +T + FG++LG D
Sbjct: 319 LAAIRHRNKQLHADRTLILTDARQALHFKQTELVARKAGFIEPEQT-YEHCPFGMMLGND 377
Query: 862 RKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADL 921
+ FKTR+G TVKL ELLDE + R+ L R T+L+ EL + G +KYADL
Sbjct: 378 GRPFKTRTGGTVKLVELLDEAVERAETLL--SKRETDLSSDELKVLANKIGIGAVKYADL 435
Query: 922 SHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEH 981
S NR DY+FS+D ML GNTA YL YAYTR+ SI R AG++ + L + P+SL+
Sbjct: 436 SKNRTTDYMFSWDSMLSFEGNTAPYLQYAYTRVMSIFRKAGVDHQTL-----NAPISLDA 490
Query: 982 EKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKT 1041
+E LA L+ + + V + H LC YLY++++ F FY+ C ++ E +
Sbjct: 491 PQEKILAVKQLQYVEAINQVIAEGTPHVLCTYLYELASLFMSFYEACPMLKDGIE---QD 547
Query: 1042 VHTGRLLLAEATAKVMKKCFDILNIRT 1068
V R+ LA TAK ++ +L I T
Sbjct: 548 VRDSRMTLAALTAKTLQSGLSLLGIDT 574
Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 192/323 (59%), Gaps = 29/323 (8%)
Query: 124 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 183
FGD+Q N AMAL K+ K K P DIA+ I V L + +K+EVA PGF
Sbjct: 36 FGDYQFNGAMALAKVLKQK-----PRDIAEKIVEAV--------ELDGIAEKLEVAGPGF 82
Query: 184 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 239
+N++LS+ + Q+ + P LN + + V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83 INIYLSKEWLAAQLS----HAAADPRLNIESQPTKTVVVDYSSPNLAKEMHVGHLRTTII 138
Query: 240 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 299
GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK ++DL+ FY+E+K
Sbjct: 139 GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198
Query: 300 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 356
RFDE+E F RA + VV LQ D W+ DVS +++Y +LNV+LT G
Sbjct: 199 VRFDEEEGFADRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHKLNVSLTRDDIMG 258
Query: 357 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 411
ES Y + +V L+ KGL G ++++ + G+ IV KS GG+ Y T+D
Sbjct: 259 ESAYNHDLANVVSELQAKGLAVESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTD 318
Query: 412 LAAIRQRIEEEKADWIVYVTDHR 434
LAAIR R ++ AD + +TD R
Sbjct: 319 LAAIRHRNKQLHADRTLILTDAR 341
Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 192/323 (59%), Gaps = 29/323 (8%)
Query: 1141 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 1200
FGD+Q N AMAL K+ K K P DIA+ I V L + +K+EVA PGF
Sbjct: 36 FGDYQFNGAMALAKVLKQK-----PRDIAEKIVEAV--------ELDGIAEKLEVAGPGF 82
Query: 1201 VNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLR----VLVDFSSPNIAKEMHVGHLRSTII 1256
+N++LS+ + Q+ + P LN + + V+VD+SSPN+AKEMHVGHLR+TII
Sbjct: 83 INIYLSKEWLAAQLS----HAAADPRLNIESQPTKTVVVDYSSPNLAKEMHVGHLRTTII 138
Query: 1257 GDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESK 1316
GD + + LE++GH V+R NH+GDWGTQFGML+AHL DK ++DL+ FY+E+K
Sbjct: 139 GDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAHLNDKLESNQVAETALSDLEDFYREAK 198
Query: 1317 KRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE---RG 1373
RFDE+E F RA + VV LQ D W+ DVS +++Y +LNV+LT G
Sbjct: 199 VRFDEEEGFADRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHKLNVSLTRDDIMG 258
Query: 1374 ESFYQKHMEQLVPYLEKKGLLELDDGRKIMW----GEDRGSIPMTIV-KSDGGFTYDTSD 1428
ES Y + +V L+ KGL G ++++ + G+ IV KS GG+ Y T+D
Sbjct: 259 ESAYNHDLANVVSELQAKGLAVESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTD 318
Query: 1429 LAAIRQRIEEEKADWIVYVTDHR 1451
LAAIR R ++ AD + +TD R
Sbjct: 319 LAAIRHRNKQLHADRTLILTDAR 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 531,932,494
Number of Sequences: 539616
Number of extensions: 23099089
Number of successful extensions: 86097
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 77015
Number of HSP's gapped (non-prelim): 3373
length of query: 1458
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1328
effective length of database: 121,419,379
effective search space: 161244935312
effective search space used: 161244935312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)