BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15415
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25364|HCM1_YEAST Forkhead transcription factor HCM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HCM1 PE=1 SV=3
Length = 564
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNL 56
FPYY Q D W+NS+RHNLS+N F K K+ G GH W +
Sbjct: 143 FPYYKQKDASWQNSIRHNLSLNDAFIKTEKSCDGKGHFWEV 183
>sp|Q8K3Q3|FOXN4_MOUSE Forkhead box protein N4 OS=Mus musculus GN=Foxn4 PE=2 SV=1
Length = 521
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA---GHLW--NLSDMEPVED 64
F +E FPY+ D WKNSVRHNLS+N F K S G+ G LW NL+ ++ +E+
Sbjct: 226 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVETKSSGSSRKGCLWALNLARIDKMEE 284
>sp|P39521|FHL1_YEAST Pre-rRNA-processing protein FHL1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FHL1 PE=1 SV=1
Length = 936
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 13 RERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLSD 58
RE FPYY D W++SVRHNLS+N FRK K +G G LW L +
Sbjct: 493 RELFPYYKYCPDGWQSSVRHNLSLNKSFRKVSK--EGKGWLWGLDE 536
>sp|Q96NZ1|FOXN4_HUMAN Forkhead box protein N4 OS=Homo sapiens GN=FOXN4 PE=2 SV=2
Length = 517
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRK---GVKASQGAGHLW--NLSDMEPVEDA 65
F +E FPY+ D WKNSVRHNLS+N F K + S G LW NL+ ++ +E+
Sbjct: 222 FMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGSSRKGCLWALNLARIDKMEE- 280
Query: 66 SKSNWVSIKVTGVKRT 81
W + + R+
Sbjct: 281 EMHKWKRKDLAAIHRS 296
>sp|Q64733|FOXB2_MOUSE Forkhead box protein B2 OS=Mus musculus GN=Foxb2 PE=2 SV=1
Length = 428
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F ERFPYY ++ RW+NS+RHNLS N F K + G G W L
Sbjct: 42 FIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89
>sp|Q5VYV0|FOXB2_HUMAN Forkhead box protein B2 OS=Homo sapiens GN=FOXB2 PE=2 SV=1
Length = 432
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F ERFPYY ++ RW+NS+RHNLS N F K + G G W L
Sbjct: 42 FIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89
>sp|O15353|FOXN1_HUMAN Forkhead box protein N1 OS=Homo sapiens GN=FOXN1 PE=2 SV=1
Length = 648
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA----GHLWNLS 57
F E FPY+ D WKNSVRHNLS+N F K V+ G+ G LW L+
Sbjct: 300 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKSGSSSRKGCLWALN 349
>sp|Q61575|FOXN1_MOUSE Forkhead box protein N1 OS=Mus musculus GN=Foxn1 PE=2 SV=1
Length = 648
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGA----GHLWNLS 57
F E FPY+ D WKNSVRHNLS+N F K V+ G+ G LW L+
Sbjct: 300 FMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEK-VENKSGSSSRKGCLWALN 349
>sp|Q66J77|FOXN2_XENLA Forkhead box protein N2 OS=Xenopus laevis GN=foxn2 PE=2 SV=1
Length = 430
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS---QGAGHLW 54
+RFPY++ WKNSVRHNLS+N +F+K ++ G G LW
Sbjct: 140 DRFPYFSTAPTGWKNSVRHNLSLNKYFQKVERSHGKVNGKGSLW 183
>sp|Q61850|FOXC2_MOUSE Forkhead box protein C2 OS=Mus musculus GN=Foxc2 PE=2 SV=2
Length = 494
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F +RFP+Y +N W+NS+RHNLS+N F K + + G G W L
Sbjct: 100 FIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 147
>sp|Q99958|FOXC2_HUMAN Forkhead box protein C2 OS=Homo sapiens GN=FOXC2 PE=1 SV=1
Length = 501
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F +RFP+Y +N W+NS+RHNLS+N F K + + G G W L
Sbjct: 101 FIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 148
>sp|O93529|FOXB1_XENLA Forkhead box protein B1 OS=Xenopus laevis GN=foxb1 PE=2 SV=1
Length = 319
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F +RFPYY +N RW+NS+RHNLS N F K + G G W L
Sbjct: 42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89
>sp|Q9DE24|FXC1B_DANRE Forkhead box C1-B OS=Danio rerio GN=foxc1b PE=2 SV=1
Length = 433
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F ERFP+Y N W+NS+RHNLS+N F K + + G G W L
Sbjct: 103 FIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 150
>sp|P42128|FOXK1_MOUSE Forkhead box protein K1 OS=Mus musculus GN=Foxk1 PE=1 SV=2
Length = 719
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPVEDA 65
+ +PYY D W+NS+RHNLS+N +F K ++ + G G W + S+ + VE A
Sbjct: 323 KHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQA 379
>sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1
Length = 733
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPVEDA 65
+ +PYY D W+NS+RHNLS+N +F K ++ + G G W + S+ + VE A
Sbjct: 337 KHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQA 393
>sp|Q64732|FOXB1_MOUSE Forkhead box protein B1 OS=Mus musculus GN=Foxb1 PE=2 SV=2
Length = 325
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
F +RFPYY +N RW+NS+RHNLS N F K + G G W L
Sbjct: 42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89
>sp|Q99853|FOXB1_HUMAN Forkhead box protein B1 OS=Homo sapiens GN=FOXB1 PE=2 SV=3
Length = 325
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
F +RFPYY +N RW+NS+RHNLS N F K + G G W L
Sbjct: 42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89
>sp|Q3UCQ1|FOXK2_MOUSE Forkhead box protein K2 OS=Mus musculus GN=Foxk2 PE=2 SV=3
Length = 651
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVEDASKSNWV 71
+ +PYY D W+NS+RHNLS+N +F K ++ + G G W ++ AS+S V
Sbjct: 281 KNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWR------IDPASESKLV 334
Query: 72 SIKVTGVKRTGWLAF----GYYSERPKYDMLNTSGVLRTCMCNSNETYMLCRKCKGMPVQ 127
+ G F G S R N +GVL + L R+ P++
Sbjct: 335 EQAFRKRRPRGVPCFRTPLGPLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAPLE 394
>sp|Q7ZX03|FOXK2_XENLA Forkhead box protein K2 OS=Xenopus laevis GN=foxk2 PE=2 SV=2
Length = 642
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL---SDMEPVEDA 65
+ +PYY D W+NS+RHNLS+N +F K ++ + G G W + S+ + VE A
Sbjct: 251 KNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQA 307
>sp|Q01167|FOXK2_HUMAN Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 PE=1 SV=3
Length = 660
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSDMEPVEDASKSNWV 71
+ +PYY D W+NS+RHNLS+N +F K ++ + G G W ++ AS+S +
Sbjct: 290 KNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWR------IDPASESKLI 343
Query: 72 SIKVTGVKRTGWLAF----GYYSERPKYDMLNTSGVLRTCMCNSNETYMLCRKCKGMPVQ 127
+ G F G S R N +GVL + L R+ P++
Sbjct: 344 EQAFRKRRPRGVPCFRTPLGPLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAPLE 403
>sp|Q61060|FOXD3_MOUSE Forkhead box protein D3 OS=Mus musculus GN=Foxd3 PE=2 SV=3
Length = 465
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
F RFPYY + W+NS+RHNLS+N F K + + G G+ W L
Sbjct: 160 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 207
>sp|P79772|FOXD3_CHICK Forkhead box protein D3 OS=Gallus gallus GN=FOXD3 PE=2 SV=1
Length = 394
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
F RFPYY + W+NS+RHNLS+N F K + + G G+ W L
Sbjct: 146 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 193
>sp|Q9UJU5|FOXD3_HUMAN Forkhead box protein D3 OS=Homo sapiens GN=FOXD3 PE=1 SV=1
Length = 478
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
F RFPYY + W+NS+RHNLS+N F K + + G G+ W L
Sbjct: 170 FISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 217
>sp|O00358|FOXE1_HUMAN Forkhead box protein E1 OS=Homo sapiens GN=FOXE1 PE=1 SV=3
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
F ERFP+Y N +W+NS+RHNL++N F K + + G G+ W L
Sbjct: 82 FITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWAL 129
>sp|Q61572|FOXC1_MOUSE Forkhead box protein C1 OS=Mus musculus GN=Foxc1 PE=2 SV=3
Length = 553
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F +RFP+Y N W+NS+RHNLS+N F K + + G G W L
Sbjct: 107 FIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 154
>sp|Q12948|FOXC1_HUMAN Forkhead box protein C1 OS=Homo sapiens GN=FOXC1 PE=1 SV=3
Length = 553
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F +RFP+Y N W+NS+RHNLS+N F K + + G G W L
Sbjct: 107 FIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 154
>sp|Q8JIT6|FOXB2_XENLA Forkhead box protein B2 OS=Xenopus laevis GN=foxb2 PE=2 SV=1
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
F +RFPYY +N RW+NS+RHNLS N F K + G G W L
Sbjct: 42 FIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89
>sp|O60129|FKH2_SCHPO Fork head protein homolog 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fkh2 PE=1 SV=1
Length = 642
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
+PYY W+NS+RHNLS+N FRK + S QG G W++
Sbjct: 257 YPYYRTTKSGWQNSIRHNLSLNKAFRKVPRKSGEQGKGMKWSI 299
>sp|Q61345|FOXD1_MOUSE Forkhead box protein D1 OS=Mus musculus GN=Foxd1 PE=2 SV=2
Length = 456
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
F RFPYY + W+NS+RHNLS+N F K + + G G+ W L
Sbjct: 159 FISSRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 206
>sp|Q17381|PHA4_CAEEL Defective pharyngeal development protein 4 OS=Caenorhabditis
elegans GN=pha-4 PE=1 SV=1
Length = 506
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNLSD 58
FPYY N RW+NS+RH+LS N F K ++ G G W L +
Sbjct: 270 FPYYQNNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHE 314
>sp|Q8R2I0|FOXE1_MOUSE Forkhead box protein E1 OS=Mus musculus GN=Foxe1 PE=1 SV=2
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS--QGAGHLWNL 56
F ERFP+Y N +W+NS+RHNL++N F K + + G G+ W L
Sbjct: 84 FITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWAL 131
>sp|Q12950|FOXD4_HUMAN Forkhead box protein D4 OS=Homo sapiens GN=FOXD4 PE=2 SV=4
Length = 439
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
F +RFPYY + W+NS+RHNLS+N F K + G G+ W+L
Sbjct: 133 FISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGNYWSL 180
>sp|Q9PTK2|FOXE4_XENLA Forkhead box protein E4 OS=Xenopus laevis GN=foxe4 PE=2 SV=1
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
F ERFP+Y +N +W+NS+RHNL++N F K + G G+ W L
Sbjct: 77 FIMERFPFYRENSKKWQNSIRHNLTLNDCFVKIPREPGHPGKGNYWTL 124
>sp|Q68F77|FOXC1_XENTR Forkhead box protein C1 OS=Xenopus tropicalis GN=foxc1 PE=2 SV=1
Length = 495
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
+T N F ERFP+Y N W+NS+RHNLS+N F K + + G G W L
Sbjct: 100 ITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 155
>sp|Q32NP8|FXC1B_XENLA Forkhead box protein C1-B OS=Xenopus laevis GN=foxc1-b PE=2 SV=1
Length = 495
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
+T N F ERFP+Y N W+NS+RHNLS+N F K + + G G W L
Sbjct: 100 ITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 155
>sp|P32027|CROC_DROME Fork head domain-containing protein crocodile OS=Drosophila
melanogaster GN=croc PE=2 SV=2
Length = 508
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
ERFPYY N W+NS+RHNLS+N F K + + G G W L
Sbjct: 102 ERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTL 146
>sp|Q9UPW0|FOXJ3_HUMAN Forkhead box protein J3 OS=Homo sapiens GN=FOXJ3 PE=1 SV=2
Length = 622
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 14 ERFPYYNQNDDRWKNSVRHNLSINPHFRK--GVKASQGAGHLWNLSDMEPVED 64
+ FPYY + WKNS+RHNLS+N F K K G G W + D P ED
Sbjct: 110 DNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI-DTNPKED 161
>sp|Q9PVZ3|FXC1A_XENLA Forkhead box protein C1-A OS=Xenopus laevis GN=foxc1-a PE=2 SV=1
Length = 492
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
+T N F ERFP+Y N W+NS+RHNLS+N F K + + G G W L
Sbjct: 100 ITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTL 155
>sp|P23512|FOXA1_RAT Hepatocyte nuclear factor 3-alpha OS=Rattus norvegicus GN=Foxa1
PE=1 SV=1
Length = 466
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
FPYY QN RW+NS+RH+LS N F K ++ G G W L
Sbjct: 204 FPYYRQNQQRWQNSIRHSLSFNACFVKVARSPDKPGKGSYWTL 246
>sp|O00409|FOXN3_HUMAN Forkhead box protein N3 OS=Homo sapiens GN=FOXN3 PE=1 SV=1
Length = 490
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 14 ERFPYYNQNDDRWKNSVRHNLSINPHFRKGVK---ASQGAGHLW 54
E FPY+ WKNSVRHNLS+N F+K K S G G LW
Sbjct: 146 EHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERSQSIGKGSLW 189
>sp|O35392|FOXD2_MOUSE Forkhead box protein D2 OS=Mus musculus GN=Foxd2 PE=2 SV=1
Length = 492
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 15 RFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
RFPYY + W+NS+RHNLS+N F K + + G G+ W L
Sbjct: 162 RFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 205
>sp|O60548|FOXD2_HUMAN Forkhead box protein D2 OS=Homo sapiens GN=FOXD2 PE=2 SV=2
Length = 495
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 15 RFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
RFPYY + W+NS+RHNLS+N F K + + G G+ W L
Sbjct: 160 RFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 203
>sp|Q16676|FOXD1_HUMAN Forkhead box protein D1 OS=Homo sapiens GN=FOXD1 PE=1 SV=1
Length = 465
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 15 RFPYYNQNDDRWKNSVRHNLSINPHFRKGVK--ASQGAGHLWNL 56
RFPYY + W+NS+RHNLS+N F K + + G G+ W L
Sbjct: 158 RFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 201
>sp|Q9PVY9|FXC2A_XENLA Forkhead box protein C2-A OS=Xenopus laevis GN=foxc2-a PE=2 SV=1
Length = 465
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
+T N F +RFP+Y +N W+NS+RHNLS+N F K + + G G W+L
Sbjct: 93 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWSL 148
>sp|O43058|SEP1_SCHPO Forkhead protein sep1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sep1 PE=1 SV=1
Length = 663
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F +YN++++ W+NS+RHNLS+N F K + G GH W++
Sbjct: 162 FSFYNKSNNGWQNSIRHNLSLNKAFMKIERPRNLPGKGHFWSI 204
>sp|P33205|FXA4A_XENLA Forkhead box protein A4-A OS=Xenopus laevis GN=foxa4-a PE=1 SV=3
Length = 399
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
FPYY QN RW+NS+RH+LS N F K ++ + G G W L
Sbjct: 153 FPYYRQNQQRWQNSIRHSLSFNDCFVKVPRSPEKPGKGSYWTL 195
>sp|Q6P839|FOXA4_XENTR Forkhead box protein A4 OS=Xenopus tropicalis GN=foxa4 PE=2 SV=1
Length = 399
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
FPYY QN RW+NS+RH+LS N F K ++ + G G W L
Sbjct: 153 FPYYRQNQQRWQNSIRHSLSFNDCFVKVPRSPEKPGKGSYWTL 195
>sp|Q9PVY8|FXC2B_XENLA Forkhead box protein C2-B OS=Xenopus laevis GN=foxc2-b PE=2 SV=2
Length = 461
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 3 LTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
+T N F +RFP+Y +N W+NS+RHNLS+N F K + + G G W+L
Sbjct: 93 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWSL 148
>sp|P32028|FD4_DROME Fork head domain-containing protein FD4 OS=Drosophila
melanogaster GN=fd96Ca PE=2 SV=2
Length = 372
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 11 FHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
F +RFPYY +N RW+NS+RHNLS N F K + G G W L
Sbjct: 42 FITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPRRPDRPGKGAYWAL 89
>sp|P33206|FXA4B_XENLA Forkhead box protein A4-B OS=Xenopus laevis GN=foxa4-b PE=2 SV=1
Length = 400
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 16 FPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQ--GAGHLWNL 56
FPYY QN RW+NS+RH+LS N F K ++ + G G W L
Sbjct: 153 FPYYRQNQQRWQNSIRHSLSFNDCFIKVPRSPEKPGKGSYWTL 195
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,389,784
Number of Sequences: 539616
Number of extensions: 1840113
Number of successful extensions: 3579
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3325
Number of HSP's gapped (non-prelim): 260
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)