Query psy15415
Match_columns 128
No_of_seqs 159 out of 707
Neff 5.2
Searched_HMMs 13730
Date Fri Aug 16 20:27:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15415.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15415hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c6ya1 a.4.5.14 (A:1-98) Inte 100.0 6.6E-33 4.8E-37 194.0 3.3 58 2-59 23-82 (98)
2 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 100.0 1.3E-32 9.5E-37 184.5 3.4 57 2-58 16-75 (75)
3 d2hdca_ a.4.5.14 (A:) Genesis 100.0 3.4E-32 2.5E-36 190.1 1.4 65 2-68 22-88 (97)
4 d3bpya1 a.4.5.14 (A:93-177) Af 100.0 3.5E-31 2.5E-35 181.2 3.6 56 2-57 25-85 (85)
5 d1d5va_ a.4.5.14 (A:) Adipocyt 100.0 2E-31 1.5E-35 185.3 1.8 64 2-67 24-89 (94)
6 d2a07f1 a.4.5.14 (F:503-584) F 100.0 1.9E-30 1.4E-34 176.5 -0.6 55 2-59 22-76 (82)
7 d1oqja_ d.217.1.1 (A:) Glucoco 55.8 1.1 7.8E-05 29.0 -0.1 15 21-35 51-65 (90)
8 d1h5pa_ d.217.1.1 (A:) Nuclear 44.1 2.8 0.0002 27.2 0.5 14 20-33 56-69 (95)
9 d1ufna_ d.217.1.1 (A:) Putativ 28.9 6.8 0.0005 25.1 0.5 13 21-33 62-74 (94)
10 d1zavu1 a.108.1.1 (U:1-30) Rib 26.4 17 0.0012 18.4 1.7 12 3-14 1-12 (30)
11 d1xo3a_ d.15.3.3 (A:) C9orf74 24.0 12 0.00088 23.2 1.0 37 3-39 36-74 (101)
No 1
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=6.6e-33 Score=194.03 Aligned_cols=58 Identities=36% Similarity=0.678 Sum_probs=55.4
Q ss_pred cccHHHHHHHHHhcCCCccCCCcchhhhhhhhcccCccccccccc--CCCCcceEeeCCC
Q psy15415 2 ALTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNLSDM 59 (128)
Q Consensus 2 rLTL~eIY~~I~~~fPyyr~~~~gWkNSIRHNLSln~~F~Kv~r~--~~Gkg~~W~i~~~ 59 (128)
+|||+|||+||+++||||+.+++|||||||||||+|+||+||+++ ++|||+||+|+|+
T Consensus 23 ~ltL~eIy~~i~~~fpyfr~~~~gWkNSIRHnLS~n~~F~kv~r~~~~~gKg~~W~l~p~ 82 (98)
T d2c6ya1 23 QLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPA 82 (98)
T ss_dssp CEEHHHHHHHHHHHCTTSCTTCHHHHHHHHHHHHHSTTEEEECCCTTSCCSSCEEEECHH
T ss_pred CccHHHHHHHHHHhCcccccCCCCcchhhchhcccccceEeccCCCCCCCCCceEEECcc
Confidence 699999999999999999999999999999999999999999985 5799999999986
No 2
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.97 E-value=1.3e-32 Score=184.47 Aligned_cols=57 Identities=33% Similarity=0.580 Sum_probs=54.2
Q ss_pred cccHHHHHHHHHhcCCCccCCCcchhhhhhhhcccCcccccccccC---CCCcceEeeCC
Q psy15415 2 ALTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKAS---QGAGHLWNLSD 58 (128)
Q Consensus 2 rLTL~eIY~~I~~~fPyyr~~~~gWkNSIRHNLSln~~F~Kv~r~~---~Gkg~~W~i~~ 58 (128)
+|||+|||+||+++|||||.+..|||||||||||+|+||+||++++ .|||+||+|+|
T Consensus 16 ~ltL~eIy~~i~~~fpy~r~~~~gWkNSIRHnLS~n~~F~kv~r~~~~~~gKg~~W~l~P 75 (75)
T d1kq8a_ 16 RLTLAEINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNP 75 (75)
T ss_dssp CBCHHHHHHHHHHHCTTGGGTCSCCHHHHHHHHHHHTCCEECSSCSCCSSSCCCCEECCC
T ss_pred CccHHHHHHHHHHhCcccccCCccchhHhhecccccceeEecCCCCCCCCCCccEEEeCc
Confidence 6999999999999999999999999999999999999999999964 39999999997
No 3
>d2hdca_ a.4.5.14 (A:) Genesis {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.96 E-value=3.4e-32 Score=190.08 Aligned_cols=65 Identities=38% Similarity=0.632 Sum_probs=59.3
Q ss_pred cccHHHHHHHHHhcCCCccCCCcchhhhhhhhcccCccccccccc--CCCCcceEeeCCCchHHHhhhc
Q psy15415 2 ALTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNLSDMEPVEDASKS 68 (128)
Q Consensus 2 rLTL~eIY~~I~~~fPyyr~~~~gWkNSIRHNLSln~~F~Kv~r~--~~Gkg~~W~i~~~~~~e~~~~~ 68 (128)
+|||+|||+||+++||||+.+++|||||||||||+|+||+||+++ ++|||+||+|+|+ .+..|..
T Consensus 22 ~ltL~eIY~~i~~~fpyfr~~~~gWkNSIRHnLSln~~F~kv~~~~~~~gKg~~W~l~p~--~~~~~~~ 88 (97)
T d2hdca_ 22 KLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQ--SEDMFDN 88 (97)
T ss_dssp CBCHHHHHHHHHHHCHHHHHHCSSHHHHHHHHHHHHHCCEEECSCTTCSSSCCEEECCTT--HHHHHHH
T ss_pred CccHHHHHHHHHHhCccccCCCCCchhhhhhhcchhhhhcccCCCCCCCCCCcEEEECcc--HHHHhhc
Confidence 699999999999999999999999999999999999999999986 4799999999996 5566653
No 4
>d3bpya1 a.4.5.14 (A:93-177) Afx (Foxo4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=3.5e-31 Score=181.21 Aligned_cols=56 Identities=32% Similarity=0.587 Sum_probs=52.9
Q ss_pred cccHHHHHHHHHhcCCCccCC-----CcchhhhhhhhcccCcccccccccCCCCcceEeeC
Q psy15415 2 ALTANLRLFFHRERFPYYNQN-----DDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLS 57 (128)
Q Consensus 2 rLTL~eIY~~I~~~fPyyr~~-----~~gWkNSIRHNLSln~~F~Kv~r~~~Gkg~~W~i~ 57 (128)
+|||+|||+||+++|||||.. ..|||||||||||+|+||+||+++++|||+||+||
T Consensus 25 ~ltL~eIY~~i~~~fPyyr~~~~~~~~~gWkNSIRHnLSl~~~F~kv~r~~~gKg~~W~i~ 85 (85)
T d3bpya1 25 RLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNLSLHSKFIKVHNEATGKSSWWMLN 85 (85)
T ss_dssp CBCHHHHHHHHHHHCGGGTTCTTCCTTSHHHHHHHHHHHHCTTEEEECCCSTTCCCEEEEC
T ss_pred CccHHHHHHHHHHhChhhhccCcccccccchhhHHHHhhHhhheeeCCCCCCCCCceeecC
Confidence 799999999999999999954 36999999999999999999999999999999997
No 5
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=2e-31 Score=185.25 Aligned_cols=64 Identities=36% Similarity=0.644 Sum_probs=58.0
Q ss_pred cccHHHHHHHHHhcCCCccCCCcchhhhhhhhcccCccccccccc--CCCCcceEeeCCCchHHHhhh
Q psy15415 2 ALTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKA--SQGAGHLWNLSDMEPVEDASK 67 (128)
Q Consensus 2 rLTL~eIY~~I~~~fPyyr~~~~gWkNSIRHNLSln~~F~Kv~r~--~~Gkg~~W~i~~~~~~e~~~~ 67 (128)
+|||+|||+||+++|||||.++.|||||||||||+|+||+||+++ .+|||+||+|+|+. +..|.
T Consensus 24 ~ltL~eIY~~i~~~fpyfr~~~~gWkNSIRHnLSln~~F~kv~~~~~~~gkg~~W~l~p~~--~~~f~ 89 (94)
T d1d5va_ 24 KITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS--YNMFE 89 (94)
T ss_dssp SBCHHHHHHHHHHHCTHHHHCCTTHHHHHHHHHHHCSSEEECCCCTTSCSCCCCEEECCSC--SSTTS
T ss_pred CccHHHHHHHHHHHCCccCccccchHHHHHHHccccceEEEcCcCCCCCCCCceEEECccH--HHHHh
Confidence 699999999999999999999999999999999999999999985 46999999999973 44443
No 6
>d2a07f1 a.4.5.14 (F:503-584) Forkhead box protein P2, FOXP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=1.9e-30 Score=176.45 Aligned_cols=55 Identities=33% Similarity=0.645 Sum_probs=52.5
Q ss_pred cccHHHHHHHHHhcCCCccCCCcchhhhhhhhcccCcccccccccCCCCcceEeeCCC
Q psy15415 2 ALTANLRLFFHRERFPYYNQNDDRWKNSVRHNLSINPHFRKGVKASQGAGHLWNLSDM 59 (128)
Q Consensus 2 rLTL~eIY~~I~~~fPyyr~~~~gWkNSIRHNLSln~~F~Kv~r~~~Gkg~~W~i~~~ 59 (128)
+|||+|||+||+++||||+.+++|||||||||||+|+||+||++ |||+||+|||+
T Consensus 22 ~LtL~eIy~~i~~~fpyyr~~~~gWkNSIRHnLS~n~~F~kv~~---~kG~~W~i~~~ 76 (82)
T d2a07f1 22 QLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVEN---VKGAVWTVDEV 76 (82)
T ss_dssp CBCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCTTBCCEEC---SSSEECCBCHH
T ss_pred CccHHHHHHHHHHhCcccccCCcccchhHhHhcccccceEeCCC---CCCCEEEECHH
Confidence 79999999999999999999999999999999999999999975 89999999974
No 7
>d1oqja_ d.217.1.1 (A:) Glucocorticoid modulatory element binding protein-1 (Gmeb1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.84 E-value=1.1 Score=29.00 Aligned_cols=15 Identities=20% Similarity=0.353 Sum_probs=11.3
Q ss_pred CCCcchhhhhhhhcc
Q psy15415 21 QNDDRWKNSVRHNLS 35 (128)
Q Consensus 21 ~~~~gWkNSIRHNLS 35 (128)
...+.||.|||++=.
T Consensus 51 ~~sK~WK~sIR~~G~ 65 (90)
T d1oqja_ 51 STLKDWKRAIRLGGI 65 (90)
T ss_dssp GGGSCHHHHSEETTE
T ss_pred cccCCCchhEEECCe
Confidence 455789999997643
No 8
>d1h5pa_ d.217.1.1 (A:) Nuclear autoantigen Sp100b {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.08 E-value=2.8 Score=27.15 Aligned_cols=14 Identities=29% Similarity=0.567 Sum_probs=11.3
Q ss_pred cCCCcchhhhhhhh
Q psy15415 20 NQNDDRWKNSVRHN 33 (128)
Q Consensus 20 r~~~~gWkNSIRHN 33 (128)
+...+.||.|||++
T Consensus 56 k~~sKdWK~SIR~~ 69 (95)
T d1h5pa_ 56 RGASKNWKLSIRCG 69 (95)
T ss_dssp CSTTCCHHHHCEET
T ss_pred CcccCCCcccEEEC
Confidence 45668999999974
No 9
>d1ufna_ d.217.1.1 (A:) Putative nuclear protein homolog 5830484a20rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.91 E-value=6.8 Score=25.11 Aligned_cols=13 Identities=31% Similarity=0.721 Sum_probs=10.2
Q ss_pred CCCcchhhhhhhh
Q psy15415 21 QNDDRWKNSVRHN 33 (128)
Q Consensus 21 ~~~~gWkNSIRHN 33 (128)
...+.||.|||++
T Consensus 62 ~~~K~WK~sIr~~ 74 (94)
T d1ufna_ 62 ATSKDWKGVIRCN 74 (94)
T ss_dssp TTCSCHHHHCEET
T ss_pred cccCCCcccEEEC
Confidence 4557899999964
No 10
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.38 E-value=17 Score=18.42 Aligned_cols=12 Identities=8% Similarity=-0.067 Sum_probs=8.6
Q ss_pred ccHHHHHHHHHh
Q psy15415 3 LTANLRLFFHRE 14 (128)
Q Consensus 3 LTL~eIY~~I~~ 14 (128)
||+.||-+.|++
T Consensus 1 m~~eeiv~aiek 12 (30)
T d1zavu1 1 MTIDEIIEAIEK 12 (30)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 577777777765
No 11
>d1xo3a_ d.15.3.3 (A:) C9orf74 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.99 E-value=12 Score=23.20 Aligned_cols=37 Identities=16% Similarity=-0.007 Sum_probs=25.6
Q ss_pred ccHHHHHHHHHhcCCCccCCCcchhhhhhh--hcccCcc
Q psy15415 3 LTANLRLFFHRERFPYYNQNDDRWKNSVRH--NLSINPH 39 (128)
Q Consensus 3 LTL~eIY~~I~~~fPyyr~~~~gWkNSIRH--NLSln~~ 39 (128)
.|+.|+-+++.++||-.+..--.....||+ |+..|+.
T Consensus 36 ~TV~dll~~L~~~~p~~~~~l~~~~~~lr~~v~v~vN~~ 74 (101)
T d1xo3a_ 36 WDIRNLLVWIKKNLLKERPELFIQGDSVRPGILVLINDA 74 (101)
T ss_dssp CCHHHHHHHHHHHHCCSCGGGSCCTTSCCSSEEEEETTE
T ss_pred cCHHHHHHHHHHhCCcchhhhhccCcCeeeeEEEEEcCc
Confidence 589999999999999876433333456765 5555553
Done!